Animal-Genome cDNA 20110601C-000127


Search to RefSeqBP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-000127
         (1906 letters)

Database: RefSeq49_BP.fasta 
           33,088 sequences; 17,681,374 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_776889.1| SPARC [Bos taurus].                                  502   e-142
Alignment   gi|NP_001029474.1| SPARC-like protein 1 [Bos taurus].                318   1e-86
Alignment   gi|NP_001094585.1| testican-2 [Bos taurus].                           54   5e-07
Alignment   gi|NP_001069178.1| follistatin-related protein 3 precursor [Bos...    53   1e-06
Alignment   gi|NP_786995.2| follistatin precursor [Bos taurus].                   51   4e-06

>ref|NP_776889.1| SPARC [Bos taurus].
          Length = 304

 Score =  502 bits (1292), Expect = e-142
 Identities = 230/235 (97%), Positives = 234/235 (99%), Gaps = 1/235 (0%)
 Frame = +2

Query: 35  NPCQNHHCKHGKVCELDENNSPMCVCQDPTSCPAPIGEFEKVCSNDNKTFDSSCHFFATK 214
           NPCQNHHCKHGKVCELDENN+PMCVCQDPTSCPAPIGEFEKVCSNDNKTFDSSCHFFATK
Sbjct: 70  NPCQNHHCKHGKVCELDENNTPMCVCQDPTSCPAPIGEFEKVCSNDNKTFDSSCHFFATK 129

Query: 215 CTLEGTKKGHKLHLDYIGPCKYIPPCLDSELTEFPLRMRDWLKNVLVTLYERDENNNLLT 394
           CTLEGTKKGHKLHLDYIGPCKYIPPCLDSELTEFPLRMRDWLKNVLVTLYERDE+NNLLT
Sbjct: 130 CTLEGTKKGHKLHLDYIGPCKYIPPCLDSELTEFPLRMRDWLKNVLVTLYERDEDNNLLT 189

Query: 395 EKQKLRVKKIHENEKRLEAG-DHPVELLARDFEKNYNMYIFPVHWQFGQLDQHPIDGYLS 571
           EKQKLRVKKIHENEKRLEAG DHPVELLARDFEKNYNMYIFPVHWQFGQLDQHPIDGYLS
Sbjct: 190 EKQKLRVKKIHENEKRLEAGCDHPVELLARDFEKNYNMYIFPVHWQFGQLDQHPIDGYLS 249

Query: 572 HTELAPLRAPLIPMEHCTTRFFQTCDLDNDKYIALDEWAGCFGIKEQDIDKDLVI 736
           HTELAPLRAPLIPMEHCTTRFF+TCDLDNDKYIALDEWAGCFGIKE+DIDKDLVI
Sbjct: 250 HTELAPLRAPLIPMEHCTTRFFETCDLDNDKYIALDEWAGCFGIKEKDIDKDLVI 304


>ref|NP_001029474.1| SPARC-like protein 1 [Bos taurus].
          Length = 654

 Score =  318 bits (815), Expect = 1e-86
 Identities = 142/232 (61%), Positives = 180/232 (77%), Gaps = 1/232 (0%)
 Frame = +2

Query: 41   CQNHHCKHGKVCELDENNSPMCVCQDPTSCPAPIGEFEKVCSNDNKTFDSSCHFFATKCT 220
            C +  CK G +C+ D++  P CVCQDP SCP P    ++VC  DN+T+ SSCH FATKC 
Sbjct: 423  CLSFQCKRGHICKADQHGKPYCVCQDPASCP-PTKLLDQVCGTDNQTYASSCHLFATKCR 481

Query: 221  LEGTKKGHKLHLDYIGPCKYIPPCLDSELTEFPLRMRDWLKNVLVTLYERD-ENNNLLTE 397
            +E TKKGH+LHLDY G CK IP C D E+T+FPLRMRDWLKN+LV LYE + E++  L E
Sbjct: 482  MERTKKGHQLHLDYFGACKTIPACTDFEVTQFPLRMRDWLKNILVQLYEPNPEHSGYLNE 541

Query: 398  KQKLRVKKIHENEKRLEAGDHPVELLARDFEKNYNMYIFPVHWQFGQLDQHPIDGYLSHT 577
            KQ+ +VKKI+ +EKRL AGDH ++LL RDF+KNY+MY++PVHWQF +LDQHP D  L+H+
Sbjct: 542  KQRNKVKKIYLDEKRLLAGDHSIDLLLRDFKKNYHMYVYPVHWQFSELDQHPRDRVLTHS 601

Query: 578  ELAPLRAPLIPMEHCTTRFFQTCDLDNDKYIALDEWAGCFGIKEQDIDKDLV 733
            ELAPLRA L+PMEHC TRFF+ CD + DK+I L EW  CF IKE+DID++L+
Sbjct: 602  ELAPLRASLVPMEHCITRFFEECDPNKDKHITLQEWGHCFEIKEEDIDENLL 653


>ref|NP_001094585.1| testican-2 [Bos taurus].
          Length = 424

 Score = 53.9 bits (128), Expect = 5e-07
 Identities = 58/255 (22%), Positives = 81/255 (31%), Gaps = 34/255 (13%)
 Frame = +2

Query: 35  NPCQNHHCKHGKVCELDENNSPMCVCQ------------------DPTSCPAPIGEFEKV 160
           +PCQ   C   KVC        MC+ +                  D    P  +     V
Sbjct: 88  DPCQKVKCSRHKVCIAQGYQRAMCISRKKLEHRIKQPAVKLHGNKDTICKPCHMAHLASV 147

Query: 161 CSNDNKTFDSSCHFFATKCTLEGTKKGHKLHLDYIGPC-------------KYIPPCLDS 301
           C +D  T+ S C      C         +L +   GPC                  C   
Sbjct: 148 CGSDGHTYSSVCKLEQQACL-----SSKQLTVRCEGPCPCPTEQAATSTSDSKPETCTGQ 202

Query: 302 ELTEFPLRMRDWLKNVLVTLYERDENNNLLTEKQKLRVKKIHENEKR---LEAGDHPVEL 472
           +L +   R+RDW +                          +HEN K+     +G  P   
Sbjct: 203 DLADLGDRLRDWFQ-------------------------LLHENSKQNGSANSGASPASG 237

Query: 473 LARDFEKNYNMYIFPVHWQFGQLDQHPIDGYLSHTELAPLRAPLIPMEHCTTRFFQTCDL 652
           L +    +    I    W F +LD    D +L  TELA +   L   E C   FF +CD 
Sbjct: 238 LDKSLGASCKDSI---GWMFSKLDTSA-DLFLDQTELAAIN--LDKYEVCIRPFFNSCDT 291

Query: 653 DNDKYIALDEWAGCF 697
             D  ++  EW  CF
Sbjct: 292 YKDGRVSTAEWCFCF 306


>ref|NP_001069178.1| follistatin-related protein 3 precursor [Bos taurus].
          Length = 261

 Score = 52.8 bits (125), Expect = 1e-06
 Identities = 29/91 (31%), Positives = 41/91 (45%)
 Frame = +2

Query: 41  CQNHHCKHGKVCELDENNSPMCVCQDPTSCPAPIGEFEKVCSNDNKTFDSSCHFFATKCT 220
           C +  C   + C +D+  S  CV      CPAP    +++C N+N T+ SSCH     C 
Sbjct: 171 CAHVVCLRPQSCVVDQTGSAHCVVCRAAPCPAPSSPGQELCGNNNVTYLSSCHLRQATCF 230

Query: 221 LEGTKKGHKLHLDYIGPCKYIPPCLDSELTE 313
           L     G  + + + G C   P  LD E  E
Sbjct: 231 L-----GRSIGVRHPGSCAGTPEPLDPESEE 256


>ref|NP_786995.2| follistatin precursor [Bos taurus].
          Length = 344

 Score = 50.8 bits (120), Expect = 4e-06
 Identities = 27/90 (30%), Positives = 39/90 (43%)
 Frame = +2

Query: 41  CQNHHCKHGKVCELDENNSPMCVCQDPTSCPAPIGEFEKVCSNDNKTFDSSCHFFATKCT 220
           C++  C     C +D+ N+  CV  +   CP P    + +C ND  T+ S+CH     C 
Sbjct: 168 CRDVFCPGSSTCVVDQTNNAYCVTCNRI-CPEPTSSEQYLCGNDGVTYPSACHLRKATCL 226

Query: 221 LEGTKKGHKLHLDYIGPCKYIPPCLDSELT 310
           L     G  + L Y G C     C D + T
Sbjct: 227 L-----GRSIGLAYEGKCIKAKSCDDIQCT 251


  Database: RefSeq49_BP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 17,681,374
  Number of sequences in database:  33,088
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 67,812,440
Number of extensions: 1843682
Number of successful extensions: 6998
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 6887
Number of HSP's successfully gapped: 5
Length of query: 635
Length of database: 17,681,374
Length adjustment: 108
Effective length of query: 527
Effective length of database: 14,107,870
Effective search space: 7434847490
Effective search space used: 7434847490
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

Search to RefSeqCP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-000127
         (1906 letters)

Database: RefSeq49_CP.fasta 
           33,336 sequences; 18,874,504 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_854982.1| PREDICTED: similar to SPARC precursor (Secreted...   505   e-143
Alignment   gi|XP_860591.1| PREDICTED: similar to SPARC-like protein 1 prec...   322   6e-88
Alignment   gi|XP_535648.2| PREDICTED: similar to SPARC-like protein 1 prec...   322   6e-88
Alignment   gi|XP_850045.1| PREDICTED: similar to SPARC-like protein 1 prec...   322   6e-88
Alignment   gi|XP_860498.1| PREDICTED: similar to SPARC-like protein 1 prec...   322   6e-88
Alignment   gi|XP_539793.2| PREDICTED: similar to Testican-3 precursor (SPA...    57   6e-08
Alignment   gi|XP_546155.2| PREDICTED: similar to Testican-2 precursor (SPA...    52   2e-06
Alignment   gi|XP_850525.1| PREDICTED: similar to Testican-2 precursor (SPA...    52   2e-06
Alignment   gi|XP_536475.2| PREDICTED: similar to Follistatin precursor (FS...    52   3e-06

>ref|XP_854982.1| PREDICTED: similar to SPARC precursor (Secreted protein acidic and
           rich in cysteine) (Osteonectin) (ON) (Basement-membrane
           protein 40) (BM-40) [Canis familiaris].
          Length = 303

 Score =  505 bits (1301), Expect = e-143
 Identities = 229/234 (97%), Positives = 233/234 (99%)
 Frame = +2

Query: 35  NPCQNHHCKHGKVCELDENNSPMCVCQDPTSCPAPIGEFEKVCSNDNKTFDSSCHFFATK 214
           NPCQNHHCKHGKVCELDENN+PMCVCQDPTSCP PIG+FEKVCSNDNKTFDSSCHFFATK
Sbjct: 70  NPCQNHHCKHGKVCELDENNTPMCVCQDPTSCPGPIGDFEKVCSNDNKTFDSSCHFFATK 129

Query: 215 CTLEGTKKGHKLHLDYIGPCKYIPPCLDSELTEFPLRMRDWLKNVLVTLYERDENNNLLT 394
           CTLEGTKKGHKLHLDYIGPCKYIPPCLDSELTEFPLRMRDWLKNVLVTLYERDE+NNLLT
Sbjct: 130 CTLEGTKKGHKLHLDYIGPCKYIPPCLDSELTEFPLRMRDWLKNVLVTLYERDEDNNLLT 189

Query: 395 EKQKLRVKKIHENEKRLEAGDHPVELLARDFEKNYNMYIFPVHWQFGQLDQHPIDGYLSH 574
           EKQKLRVKKIHENEKRLEAGDHPVELLARDFEKNYNMYIFPVHWQFGQLDQHPIDGYLSH
Sbjct: 190 EKQKLRVKKIHENEKRLEAGDHPVELLARDFEKNYNMYIFPVHWQFGQLDQHPIDGYLSH 249

Query: 575 TELAPLRAPLIPMEHCTTRFFQTCDLDNDKYIALDEWAGCFGIKEQDIDKDLVI 736
           TELAPLRAPLIPMEHCTTRFF+TCDLDNDKYIALDEWAGCFGIKEQDIDKDLVI
Sbjct: 250 TELAPLRAPLIPMEHCTTRFFETCDLDNDKYIALDEWAGCFGIKEQDIDKDLVI 303


>ref|XP_860591.1| PREDICTED: similar to SPARC-like protein 1 precursor (High
            endothelial venule protein) (Hevin) (MAST 9) isoform 4
            [Canis familiaris].
          Length = 656

 Score =  322 bits (826), Expect = 6e-88
 Identities = 143/232 (61%), Positives = 182/232 (78%), Gaps = 1/232 (0%)
 Frame = +2

Query: 41   CQNHHCKHGKVCELDENNSPMCVCQDPTSCPAPIGEFEKVCSNDNKTFDSSCHFFATKCT 220
            C N  CK G +C+ D+   P CVCQD  +CP P    ++VC  DN+T+ SSCH FATKC 
Sbjct: 425  CMNFQCKRGHICKADQQGKPHCVCQDSVTCP-PTKLLDQVCGTDNQTYASSCHLFATKCK 483

Query: 221  LEGTKKGHKLHLDYIGPCKYIPPCLDSELTEFPLRMRDWLKNVLVTLYERD-ENNNLLTE 397
            LEGTKKGH+L LDY G CK IP C D E+T+FPLRMRDWLKN+L+ LYE++ E+   L E
Sbjct: 484  LEGTKKGHQLQLDYFGACKSIPICTDFEVTQFPLRMRDWLKNILMQLYEQNPEHAGYLNE 543

Query: 398  KQKLRVKKIHENEKRLEAGDHPVELLARDFEKNYNMYIFPVHWQFGQLDQHPIDGYLSHT 577
            KQ+ +VKKI+ +EKRL AGDH ++LL RDF+KNY+MY++PVHWQFG+LDQHP+D  L+H+
Sbjct: 544  KQRNKVKKIYLDEKRLLAGDHSIDLLLRDFKKNYHMYVYPVHWQFGELDQHPMDRVLTHS 603

Query: 578  ELAPLRAPLIPMEHCTTRFFQTCDLDNDKYIALDEWAGCFGIKEQDIDKDLV 733
            ELAPLRA L+PMEHC TRFF+ CD + DK+I L+EW  CFGIKE+DID++L+
Sbjct: 604  ELAPLRASLVPMEHCITRFFEECDPNKDKHITLEEWGHCFGIKEEDIDENLL 655


>ref|XP_535648.2| PREDICTED: similar to SPARC-like protein 1 precursor (High
            endothelial venule protein) (Hevin) (MAST 9) isoform 1
            [Canis familiaris].
          Length = 667

 Score =  322 bits (826), Expect = 6e-88
 Identities = 143/232 (61%), Positives = 182/232 (78%), Gaps = 1/232 (0%)
 Frame = +2

Query: 41   CQNHHCKHGKVCELDENNSPMCVCQDPTSCPAPIGEFEKVCSNDNKTFDSSCHFFATKCT 220
            C N  CK G +C+ D+   P CVCQD  +CP P    ++VC  DN+T+ SSCH FATKC 
Sbjct: 436  CMNFQCKRGHICKADQQGKPHCVCQDSVTCP-PTKLLDQVCGTDNQTYASSCHLFATKCK 494

Query: 221  LEGTKKGHKLHLDYIGPCKYIPPCLDSELTEFPLRMRDWLKNVLVTLYERD-ENNNLLTE 397
            LEGTKKGH+L LDY G CK IP C D E+T+FPLRMRDWLKN+L+ LYE++ E+   L E
Sbjct: 495  LEGTKKGHQLQLDYFGACKSIPICTDFEVTQFPLRMRDWLKNILMQLYEQNPEHAGYLNE 554

Query: 398  KQKLRVKKIHENEKRLEAGDHPVELLARDFEKNYNMYIFPVHWQFGQLDQHPIDGYLSHT 577
            KQ+ +VKKI+ +EKRL AGDH ++LL RDF+KNY+MY++PVHWQFG+LDQHP+D  L+H+
Sbjct: 555  KQRNKVKKIYLDEKRLLAGDHSIDLLLRDFKKNYHMYVYPVHWQFGELDQHPMDRVLTHS 614

Query: 578  ELAPLRAPLIPMEHCTTRFFQTCDLDNDKYIALDEWAGCFGIKEQDIDKDLV 733
            ELAPLRA L+PMEHC TRFF+ CD + DK+I L+EW  CFGIKE+DID++L+
Sbjct: 615  ELAPLRASLVPMEHCITRFFEECDPNKDKHITLEEWGHCFGIKEEDIDENLL 666


>ref|XP_850045.1| PREDICTED: similar to SPARC-like protein 1 precursor (High
            endothelial venule protein) (Hevin) (MAST 9) isoform 2
            [Canis familiaris].
          Length = 667

 Score =  322 bits (826), Expect = 6e-88
 Identities = 143/232 (61%), Positives = 182/232 (78%), Gaps = 1/232 (0%)
 Frame = +2

Query: 41   CQNHHCKHGKVCELDENNSPMCVCQDPTSCPAPIGEFEKVCSNDNKTFDSSCHFFATKCT 220
            C N  CK G +C+ D+   P CVCQD  +CP P    ++VC  DN+T+ SSCH FATKC 
Sbjct: 436  CMNFQCKRGHICKADQQGKPHCVCQDSVTCP-PTKLLDQVCGTDNQTYASSCHLFATKCK 494

Query: 221  LEGTKKGHKLHLDYIGPCKYIPPCLDSELTEFPLRMRDWLKNVLVTLYERD-ENNNLLTE 397
            LEGTKKGH+L LDY G CK IP C D E+T+FPLRMRDWLKN+L+ LYE++ E+   L E
Sbjct: 495  LEGTKKGHQLQLDYFGACKSIPICTDFEVTQFPLRMRDWLKNILMQLYEQNPEHAGYLNE 554

Query: 398  KQKLRVKKIHENEKRLEAGDHPVELLARDFEKNYNMYIFPVHWQFGQLDQHPIDGYLSHT 577
            KQ+ +VKKI+ +EKRL AGDH ++LL RDF+KNY+MY++PVHWQFG+LDQHP+D  L+H+
Sbjct: 555  KQRNKVKKIYLDEKRLLAGDHSIDLLLRDFKKNYHMYVYPVHWQFGELDQHPMDRVLTHS 614

Query: 578  ELAPLRAPLIPMEHCTTRFFQTCDLDNDKYIALDEWAGCFGIKEQDIDKDLV 733
            ELAPLRA L+PMEHC TRFF+ CD + DK+I L+EW  CFGIKE+DID++L+
Sbjct: 615  ELAPLRASLVPMEHCITRFFEECDPNKDKHITLEEWGHCFGIKEEDIDENLL 666


>ref|XP_860498.1| PREDICTED: similar to SPARC-like protein 1 precursor (High
            endothelial venule protein) (Hevin) (MAST 9) isoform 3
            [Canis familiaris].
          Length = 609

 Score =  322 bits (826), Expect = 6e-88
 Identities = 143/232 (61%), Positives = 182/232 (78%), Gaps = 1/232 (0%)
 Frame = +2

Query: 41   CQNHHCKHGKVCELDENNSPMCVCQDPTSCPAPIGEFEKVCSNDNKTFDSSCHFFATKCT 220
            C N  CK G +C+ D+   P CVCQD  +CP P    ++VC  DN+T+ SSCH FATKC 
Sbjct: 378  CMNFQCKRGHICKADQQGKPHCVCQDSVTCP-PTKLLDQVCGTDNQTYASSCHLFATKCK 436

Query: 221  LEGTKKGHKLHLDYIGPCKYIPPCLDSELTEFPLRMRDWLKNVLVTLYERD-ENNNLLTE 397
            LEGTKKGH+L LDY G CK IP C D E+T+FPLRMRDWLKN+L+ LYE++ E+   L E
Sbjct: 437  LEGTKKGHQLQLDYFGACKSIPICTDFEVTQFPLRMRDWLKNILMQLYEQNPEHAGYLNE 496

Query: 398  KQKLRVKKIHENEKRLEAGDHPVELLARDFEKNYNMYIFPVHWQFGQLDQHPIDGYLSHT 577
            KQ+ +VKKI+ +EKRL AGDH ++LL RDF+KNY+MY++PVHWQFG+LDQHP+D  L+H+
Sbjct: 497  KQRNKVKKIYLDEKRLLAGDHSIDLLLRDFKKNYHMYVYPVHWQFGELDQHPMDRVLTHS 556

Query: 578  ELAPLRAPLIPMEHCTTRFFQTCDLDNDKYIALDEWAGCFGIKEQDIDKDLV 733
            ELAPLRA L+PMEHC TRFF+ CD + DK+I L+EW  CFGIKE+DID++L+
Sbjct: 557  ELAPLRASLVPMEHCITRFFEECDPNKDKHITLEEWGHCFGIKEEDIDENLL 608


>ref|XP_539793.2| PREDICTED: similar to Testican-3 precursor (SPARC/osteonectin,
           CWCV, and Kazal-like domains proteoglycan 3) [Canis
           familiaris].
          Length = 443

 Score = 57.0 bits (136), Expect = 6e-08
 Identities = 56/210 (26%), Positives = 78/210 (37%), Gaps = 17/210 (8%)
 Frame = +2

Query: 137 PIGEFEKVCSNDNKTFDSSCHFFATKCTLEGTKKGHKLHLDYIGPCKYIPP--------- 289
           P+     VC +D  T+ S C      C L     G +L ++  G C   P          
Sbjct: 150 PVAYTNPVCGSDGHTYSSQCKLEYQACVL-----GKQLSVNCEGRCPCPPDKPTGPSRRV 204

Query: 290 ---CLDSELTEFPLRMRDWLKNVLVTLYERDENNNLLTEKQKLRVKKIHENEKRLEAGDH 460
              C D E  E   R+RDW K     L+E    N                  K+ +A   
Sbjct: 205 KRACSDLEFREVANRLRDWFK----ALHESGSQN------------------KKTKA--- 239

Query: 461 PVELLARDFEKNYNMYIFPV-----HWQFGQLDQHPIDGYLSHTELAPLRAPLIPMEHCT 625
               L R     ++  I P+      W F +LD +  D  L  +EL  +   L   E CT
Sbjct: 240 ----LLRPERSRFDTSILPICKDSLGWMFNRLDTN-YDLLLDQSELGSIY--LDKNEQCT 292

Query: 626 TRFFQTCDLDNDKYIALDEWAGCFGIKEQD 715
             FF +CD   D  I+ +EW  CF  ++QD
Sbjct: 293 KAFFNSCDTYKDSLISNNEWCYCFQ-RQQD 321


>ref|XP_546155.2| PREDICTED: similar to Testican-2 precursor (SPARC/osteonectin,
           CWCV, and Kazal-like domains proteoglycan 2) isoform 1
           [Canis familiaris].
          Length = 421

 Score = 52.4 bits (124), Expect = 2e-06
 Identities = 57/253 (22%), Positives = 81/253 (32%), Gaps = 32/253 (12%)
 Frame = +2

Query: 35  NPCQNHHCKHGKVCELDENNSPMCVCQ------------------DPTSCPAPIGEFEKV 160
           +PCQ   C   KVC        MC+ +                  D    P  +     V
Sbjct: 85  DPCQKVKCSRHKVCIAQGYQRAMCISRKKLEHRIKQPTLKLPGNKDTICKPCHMAPLASV 144

Query: 161 CSNDNKTFDSSCHFFATKCTLEGTKKGHKLHLDYIGPCKYIPP-------------CLDS 301
           C +D  T+ S C      C         +L +   GPC                  C   
Sbjct: 145 CGSDGHTYSSVCKLEQQACL-----SSKQLTVRCEGPCPCPTEQASLSTTDGKPETCTGQ 199

Query: 302 ELTEFPLRMRDWLKNVLVTLYERDENNNLLTEKQKLRVKKIHENEKRLEAGDHPVELLAR 481
           +L +   R+RDW +                          +HEN K+  +      L A 
Sbjct: 200 DLADLGDRLRDWFQ-------------------------LLHENAKQNGSAGSGANL-AS 233

Query: 482 DFEKNYNMYIFP-VHWQFGQLDQHPIDGYLSHTELAPLRAPLIPMEHCTTRFFQTCDLDN 658
             +K+        + W F +LD    D +L  TELA +   L   E C   FF +CD   
Sbjct: 234 GLDKSLGASCKDSIGWMFSKLDTSA-DLFLDQTELAAIN--LDKYEVCIRPFFNSCDTYK 290

Query: 659 DKYIALDEWAGCF 697
           D  ++  EW  CF
Sbjct: 291 DGRVSTAEWCFCF 303


>ref|XP_850525.1| PREDICTED: similar to Testican-2 precursor (SPARC/osteonectin,
           CWCV, and Kazal-like domains proteoglycan 2) isoform 2
           [Canis familiaris].
          Length = 424

 Score = 52.4 bits (124), Expect = 2e-06
 Identities = 57/253 (22%), Positives = 81/253 (32%), Gaps = 32/253 (12%)
 Frame = +2

Query: 35  NPCQNHHCKHGKVCELDENNSPMCVCQ------------------DPTSCPAPIGEFEKV 160
           +PCQ   C   KVC        MC+ +                  D    P  +     V
Sbjct: 88  DPCQKVKCSRHKVCIAQGYQRAMCISRKKLEHRIKQPTLKLPGNKDTICKPCHMAPLASV 147

Query: 161 CSNDNKTFDSSCHFFATKCTLEGTKKGHKLHLDYIGPCKYIPP-------------CLDS 301
           C +D  T+ S C      C         +L +   GPC                  C   
Sbjct: 148 CGSDGHTYSSVCKLEQQACL-----SSKQLTVRCEGPCPCPTEQASLSTTDGKPETCTGQ 202

Query: 302 ELTEFPLRMRDWLKNVLVTLYERDENNNLLTEKQKLRVKKIHENEKRLEAGDHPVELLAR 481
           +L +   R+RDW +                          +HEN K+  +      L A 
Sbjct: 203 DLADLGDRLRDWFQ-------------------------LLHENAKQNGSAGSGANL-AS 236

Query: 482 DFEKNYNMYIFP-VHWQFGQLDQHPIDGYLSHTELAPLRAPLIPMEHCTTRFFQTCDLDN 658
             +K+        + W F +LD    D +L  TELA +   L   E C   FF +CD   
Sbjct: 237 GLDKSLGASCKDSIGWMFSKLDTSA-DLFLDQTELAAIN--LDKYEVCIRPFFNSCDTYK 293

Query: 659 DKYIALDEWAGCF 697
           D  ++  EW  CF
Sbjct: 294 DGRVSTAEWCFCF 306


>ref|XP_536475.2| PREDICTED: similar to Follistatin precursor (FS) (Activin-binding
           protein) [Canis familiaris].
          Length = 354

 Score = 51.6 bits (122), Expect = 3e-06
 Identities = 27/90 (30%), Positives = 39/90 (43%)
 Frame = +2

Query: 41  CQNHHCKHGKVCELDENNSPMCVCQDPTSCPAPIGEFEKVCSNDNKTFDSSCHFFATKCT 220
           C++  C     C +D+ N+  CV  +   CP P    + +C ND  T+ S+CH     C 
Sbjct: 178 CRDVFCPGSSTCVVDQTNNAYCVTCN-RMCPEPTSSEQYLCGNDGVTYPSACHLRKATCL 236

Query: 221 LEGTKKGHKLHLDYIGPCKYIPPCLDSELT 310
           L     G  + L Y G C     C D + T
Sbjct: 237 L-----GRSIGLAYEGKCIKAKSCEDIQCT 261


  Database: RefSeq49_CP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,874,504
  Number of sequences in database:  33,336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 70,621,138
Number of extensions: 1871578
Number of successful extensions: 6674
Number of sequences better than 1.0e-05: 9
Number of HSP's gapped: 6607
Number of HSP's successfully gapped: 9
Length of query: 635
Length of database: 18,874,504
Length adjustment: 109
Effective length of query: 526
Effective length of database: 15,240,880
Effective search space: 8016702880
Effective search space used: 8016702880
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

Search to RefSeqHP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-000127
         (1906 letters)

Database: RefSeq49_HP.fasta 
           32,964 sequences; 18,297,164 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_003109.1| SPARC precursor [Homo sapiens].                      505   e-143
Alignment   gi|NP_001121782.1| SPARC-like protein 1 precursor [Homo sapiens].    322   1e-87
Alignment   gi|NP_004675.3| SPARC-like protein 1 precursor [Homo sapiens].       322   1e-87
Alignment   gi|NP_001035249.1| testican-3 isoform 1 [Homo sapiens].               55   3e-07
Alignment   gi|NP_058646.2| testican-3 isoform 2 [Homo sapiens].                  55   3e-07
Alignment   gi|NP_001191281.1| testican-3 isoform 3 [Homo sapiens].               55   3e-07
Alignment   gi|NP_001191288.1| testican-3 isoform 10 [Homo sapiens].              54   4e-07
Alignment   gi|NP_001191287.1| testican-3 isoform 9 [Homo sapiens].               54   4e-07
Alignment   gi|NP_037541.1| follistatin isoform FST344 precursor [Homo sapi...    52   3e-06
Alignment   gi|NP_006341.1| follistatin isoform FST317 precursor [Homo sapi...    52   3e-06

>ref|NP_003109.1| SPARC precursor [Homo sapiens].
          Length = 303

 Score =  505 bits (1301), Expect = e-143
 Identities = 229/234 (97%), Positives = 234/234 (100%)
 Frame = +2

Query: 35  NPCQNHHCKHGKVCELDENNSPMCVCQDPTSCPAPIGEFEKVCSNDNKTFDSSCHFFATK 214
           NPCQNHHCKHGKVCELDENN+PMCVCQDPTSCPAPIGEFEKVCSNDNKTFDSSCHFFATK
Sbjct: 70  NPCQNHHCKHGKVCELDENNTPMCVCQDPTSCPAPIGEFEKVCSNDNKTFDSSCHFFATK 129

Query: 215 CTLEGTKKGHKLHLDYIGPCKYIPPCLDSELTEFPLRMRDWLKNVLVTLYERDENNNLLT 394
           CTLEGTKKGHKLHLDYIGPCKYIPPCLDSELTEFPLRMRDWLKNVLVTLYERDE+NNLLT
Sbjct: 130 CTLEGTKKGHKLHLDYIGPCKYIPPCLDSELTEFPLRMRDWLKNVLVTLYERDEDNNLLT 189

Query: 395 EKQKLRVKKIHENEKRLEAGDHPVELLARDFEKNYNMYIFPVHWQFGQLDQHPIDGYLSH 574
           EKQKLRVKKIHENEKRLEAGDHPVELLARDFEKNYNMYIFPVHWQFGQLDQHPIDGYLSH
Sbjct: 190 EKQKLRVKKIHENEKRLEAGDHPVELLARDFEKNYNMYIFPVHWQFGQLDQHPIDGYLSH 249

Query: 575 TELAPLRAPLIPMEHCTTRFFQTCDLDNDKYIALDEWAGCFGIKEQDIDKDLVI 736
           TELAPLRAPLIPMEHCTTRFF+TCDLDNDKYIALDEWAGCFGIK++DIDKDLVI
Sbjct: 250 TELAPLRAPLIPMEHCTTRFFETCDLDNDKYIALDEWAGCFGIKQKDIDKDLVI 303


>ref|NP_001121782.1| SPARC-like protein 1 precursor [Homo sapiens].
          Length = 664

 Score =  322 bits (824), Expect = 1e-87
 Identities = 142/232 (61%), Positives = 180/232 (77%), Gaps = 1/232 (0%)
 Frame = +2

Query: 41   CQNHHCKHGKVCELDENNSPMCVCQDPTSCPAPIGEFEKVCSNDNKTFDSSCHFFATKCT 220
            C +  CK G +C+ D+   P CVCQDP +CP P    ++VC  DN+T+ SSCH FATKC 
Sbjct: 433  CMSFQCKRGHICKADQQGKPHCVCQDPVTCP-PTKPLDQVCGTDNQTYASSCHLFATKCR 491

Query: 221  LEGTKKGHKLHLDYIGPCKYIPPCLDSELTEFPLRMRDWLKNVLVTLYERD-ENNNLLTE 397
            LEGTKKGH+L LDY G CK IP C D E+ +FPLRMRDWLKN+L+ LYE + E+   L E
Sbjct: 492  LEGTKKGHQLQLDYFGACKSIPTCTDFEVIQFPLRMRDWLKNILMQLYEANSEHAGYLNE 551

Query: 398  KQKLRVKKIHENEKRLEAGDHPVELLARDFEKNYNMYIFPVHWQFGQLDQHPIDGYLSHT 577
            KQ+ +VKKI+ +EKRL AGDHP++LL RDF+KNY+MY++PVHWQF +LDQHP+D  L+H+
Sbjct: 552  KQRNKVKKIYLDEKRLLAGDHPIDLLLRDFKKNYHMYVYPVHWQFSELDQHPMDRVLTHS 611

Query: 578  ELAPLRAPLIPMEHCTTRFFQTCDLDNDKYIALDEWAGCFGIKEQDIDKDLV 733
            ELAPLRA L+PMEHC TRFF+ CD + DK+I L EW  CFGIKE+DID++L+
Sbjct: 612  ELAPLRASLVPMEHCITRFFEECDPNKDKHITLKEWGHCFGIKEEDIDENLL 663


>ref|NP_004675.3| SPARC-like protein 1 precursor [Homo sapiens].
          Length = 664

 Score =  322 bits (824), Expect = 1e-87
 Identities = 142/232 (61%), Positives = 180/232 (77%), Gaps = 1/232 (0%)
 Frame = +2

Query: 41   CQNHHCKHGKVCELDENNSPMCVCQDPTSCPAPIGEFEKVCSNDNKTFDSSCHFFATKCT 220
            C +  CK G +C+ D+   P CVCQDP +CP P    ++VC  DN+T+ SSCH FATKC 
Sbjct: 433  CMSFQCKRGHICKADQQGKPHCVCQDPVTCP-PTKPLDQVCGTDNQTYASSCHLFATKCR 491

Query: 221  LEGTKKGHKLHLDYIGPCKYIPPCLDSELTEFPLRMRDWLKNVLVTLYERD-ENNNLLTE 397
            LEGTKKGH+L LDY G CK IP C D E+ +FPLRMRDWLKN+L+ LYE + E+   L E
Sbjct: 492  LEGTKKGHQLQLDYFGACKSIPTCTDFEVIQFPLRMRDWLKNILMQLYEANSEHAGYLNE 551

Query: 398  KQKLRVKKIHENEKRLEAGDHPVELLARDFEKNYNMYIFPVHWQFGQLDQHPIDGYLSHT 577
            KQ+ +VKKI+ +EKRL AGDHP++LL RDF+KNY+MY++PVHWQF +LDQHP+D  L+H+
Sbjct: 552  KQRNKVKKIYLDEKRLLAGDHPIDLLLRDFKKNYHMYVYPVHWQFSELDQHPMDRVLTHS 611

Query: 578  ELAPLRAPLIPMEHCTTRFFQTCDLDNDKYIALDEWAGCFGIKEQDIDKDLV 733
            ELAPLRA L+PMEHC TRFF+ CD + DK+I L EW  CFGIKE+DID++L+
Sbjct: 612  ELAPLRASLVPMEHCITRFFEECDPNKDKHITLKEWGHCFGIKEEDIDENLL 663


>ref|NP_001035249.1| testican-3 isoform 1 [Homo sapiens].
          Length = 433

 Score = 54.7 bits (130), Expect = 3e-07
 Identities = 61/265 (23%), Positives = 88/265 (33%), Gaps = 38/265 (14%)
 Frame = +2

Query: 35  NPCQNHHCKHGKVCELDENNSPMCVCQD---------------------PTSCPAPIGEF 151
           +PC    C   KVC   ++ + +C+                         T    P+   
Sbjct: 85  DPCLKMKCSRHKVCIAQDSQTAVCISHRRLTHRMKEAGVDHRQWRGPILSTCKQCPVVYP 144

Query: 152 EKVCSNDNKTFDSSCHFFATKCTLEGTKKGHKLHLDYIG--PCKYIPP----------CL 295
             VC +D  T+   C      C L     G ++ +   G  PC    P          C 
Sbjct: 145 SPVCGSDGHTYSFQCKLEYQACVL-----GKQISVKCEGHCPCPSDKPTSTSRNVKRACS 199

Query: 296 DSELTEFPLRMRDWLKNVLVTLYERDENNNLLTEKQKLRVKKIHENEKRLEAGDHPVELL 475
           D E  E   R+RDW K     L+E    N                            + L
Sbjct: 200 DLEFREVANRLRDWFK----ALHESGSQNK-------------------------KTKTL 230

Query: 476 ARDFEKNYNMYIFPV-----HWQFGQLDQHPIDGYLSHTELAPLRAPLIPMEHCTTRFFQ 640
            R     ++  I P+      W F +LD +  D  L  +EL  +   L   E CT  FF 
Sbjct: 231 LRPERSRFDTSILPICKDSLGWMFNRLDTN-YDLLLDQSELRSIY--LDKNEQCTKAFFN 287

Query: 641 TCDLDNDKYIALDEWAGCFGIKEQD 715
           +CD   D  I+ +EW  CF  ++QD
Sbjct: 288 SCDTYKDSLISNNEWCYCFQ-RQQD 311


>ref|NP_058646.2| testican-3 isoform 2 [Homo sapiens].
          Length = 436

 Score = 54.7 bits (130), Expect = 3e-07
 Identities = 61/265 (23%), Positives = 88/265 (33%), Gaps = 38/265 (14%)
 Frame = +2

Query: 35  NPCQNHHCKHGKVCELDENNSPMCVCQD---------------------PTSCPAPIGEF 151
           +PC    C   KVC   ++ + +C+                         T    P+   
Sbjct: 88  DPCLKMKCSRHKVCIAQDSQTAVCISHRRLTHRMKEAGVDHRQWRGPILSTCKQCPVVYP 147

Query: 152 EKVCSNDNKTFDSSCHFFATKCTLEGTKKGHKLHLDYIG--PCKYIPP----------CL 295
             VC +D  T+   C      C L     G ++ +   G  PC    P          C 
Sbjct: 148 SPVCGSDGHTYSFQCKLEYQACVL-----GKQISVKCEGHCPCPSDKPTSTSRNVKRACS 202

Query: 296 DSELTEFPLRMRDWLKNVLVTLYERDENNNLLTEKQKLRVKKIHENEKRLEAGDHPVELL 475
           D E  E   R+RDW K     L+E    N                            + L
Sbjct: 203 DLEFREVANRLRDWFK----ALHESGSQNK-------------------------KTKTL 233

Query: 476 ARDFEKNYNMYIFPV-----HWQFGQLDQHPIDGYLSHTELAPLRAPLIPMEHCTTRFFQ 640
            R     ++  I P+      W F +LD +  D  L  +EL  +   L   E CT  FF 
Sbjct: 234 LRPERSRFDTSILPICKDSLGWMFNRLDTN-YDLLLDQSELRSIY--LDKNEQCTKAFFN 290

Query: 641 TCDLDNDKYIALDEWAGCFGIKEQD 715
           +CD   D  I+ +EW  CF  ++QD
Sbjct: 291 SCDTYKDSLISNNEWCYCFQ-RQQD 314


>ref|NP_001191281.1| testican-3 isoform 3 [Homo sapiens].
          Length = 385

 Score = 54.7 bits (130), Expect = 3e-07
 Identities = 61/265 (23%), Positives = 88/265 (33%), Gaps = 38/265 (14%)
 Frame = +2

Query: 35  NPCQNHHCKHGKVCELDENNSPMCVCQD---------------------PTSCPAPIGEF 151
           +PC    C   KVC   ++ + +C+                         T    P+   
Sbjct: 37  DPCLKMKCSRHKVCIAQDSQTAVCISHRRLTHRMKEAGVDHRQWRGPILSTCKQCPVVYP 96

Query: 152 EKVCSNDNKTFDSSCHFFATKCTLEGTKKGHKLHLDYIG--PCKYIPP----------CL 295
             VC +D  T+   C      C L     G ++ +   G  PC    P          C 
Sbjct: 97  SPVCGSDGHTYSFQCKLEYQACVL-----GKQISVKCEGHCPCPSDKPTSTSRNVKRACS 151

Query: 296 DSELTEFPLRMRDWLKNVLVTLYERDENNNLLTEKQKLRVKKIHENEKRLEAGDHPVELL 475
           D E  E   R+RDW K     L+E    N                            + L
Sbjct: 152 DLEFREVANRLRDWFK----ALHESGSQNK-------------------------KTKTL 182

Query: 476 ARDFEKNYNMYIFPV-----HWQFGQLDQHPIDGYLSHTELAPLRAPLIPMEHCTTRFFQ 640
            R     ++  I P+      W F +LD +  D  L  +EL  +   L   E CT  FF 
Sbjct: 183 LRPERSRFDTSILPICKDSLGWMFNRLDTN-YDLLLDQSELRSIY--LDKNEQCTKAFFN 239

Query: 641 TCDLDNDKYIALDEWAGCFGIKEQD 715
           +CD   D  I+ +EW  CF  ++QD
Sbjct: 240 SCDTYKDSLISNNEWCYCFQ-RQQD 263


>ref|NP_001191288.1| testican-3 isoform 10 [Homo sapiens].
          Length = 316

 Score = 54.3 bits (129), Expect = 4e-07
 Identities = 59/259 (22%), Positives = 84/259 (32%), Gaps = 38/259 (14%)
 Frame = +2

Query: 35  NPCQNHHCKHGKVCELDENNSPMCVCQD---------------------PTSCPAPIGEF 151
           +PC    C   KVC   ++ + +C+                         T    P+   
Sbjct: 88  DPCLKMKCSRHKVCIAQDSQTAVCISHRRLTHRMKEAGVDHRQWRGPILSTCKQCPVVYP 147

Query: 152 EKVCSNDNKTFDSSCHFFATKCTLEGTKKGHKLHLDYIG--PCKYIPP----------CL 295
             VC +D  T+   C      C L     G ++ +   G  PC    P          C 
Sbjct: 148 SPVCGSDGHTYSFQCKLEYQACVL-----GKQISVKCEGHCPCPSDKPTSTSRNVKRACS 202

Query: 296 DSELTEFPLRMRDWLKNVLVTLYERDENNNLLTEKQKLRVKKIHENEKRLEAGDHPVELL 475
           D E  E   R+RDW K     L+E    N                            + L
Sbjct: 203 DLEFREVANRLRDWFK----ALHESGSQNK-------------------------KTKTL 233

Query: 476 ARDFEKNYNMYIFPV-----HWQFGQLDQHPIDGYLSHTELAPLRAPLIPMEHCTTRFFQ 640
            R     ++  I P+      W F +LD +  D  L  +EL  +   L   E CT  FF 
Sbjct: 234 LRPERSRFDTSILPICKDSLGWMFNRLDTN-YDLLLDQSELRSIY--LDKNEQCTKAFFN 290

Query: 641 TCDLDNDKYIALDEWAGCF 697
           +CD   D  I+ +EW  CF
Sbjct: 291 SCDTYKDSLISNNEWCYCF 309


>ref|NP_001191287.1| testican-3 isoform 9 [Homo sapiens].
          Length = 313

 Score = 54.3 bits (129), Expect = 4e-07
 Identities = 59/259 (22%), Positives = 84/259 (32%), Gaps = 38/259 (14%)
 Frame = +2

Query: 35  NPCQNHHCKHGKVCELDENNSPMCVCQD---------------------PTSCPAPIGEF 151
           +PC    C   KVC   ++ + +C+                         T    P+   
Sbjct: 85  DPCLKMKCSRHKVCIAQDSQTAVCISHRRLTHRMKEAGVDHRQWRGPILSTCKQCPVVYP 144

Query: 152 EKVCSNDNKTFDSSCHFFATKCTLEGTKKGHKLHLDYIG--PCKYIPP----------CL 295
             VC +D  T+   C      C L     G ++ +   G  PC    P          C 
Sbjct: 145 SPVCGSDGHTYSFQCKLEYQACVL-----GKQISVKCEGHCPCPSDKPTSTSRNVKRACS 199

Query: 296 DSELTEFPLRMRDWLKNVLVTLYERDENNNLLTEKQKLRVKKIHENEKRLEAGDHPVELL 475
           D E  E   R+RDW K     L+E    N                            + L
Sbjct: 200 DLEFREVANRLRDWFK----ALHESGSQNK-------------------------KTKTL 230

Query: 476 ARDFEKNYNMYIFPV-----HWQFGQLDQHPIDGYLSHTELAPLRAPLIPMEHCTTRFFQ 640
            R     ++  I P+      W F +LD +  D  L  +EL  +   L   E CT  FF 
Sbjct: 231 LRPERSRFDTSILPICKDSLGWMFNRLDTN-YDLLLDQSELRSIY--LDKNEQCTKAFFN 287

Query: 641 TCDLDNDKYIALDEWAGCF 697
           +CD   D  I+ +EW  CF
Sbjct: 288 SCDTYKDSLISNNEWCYCF 306


>ref|NP_037541.1| follistatin isoform FST344 precursor [Homo sapiens].
          Length = 344

 Score = 51.6 bits (122), Expect = 3e-06
 Identities = 27/90 (30%), Positives = 39/90 (43%)
 Frame = +2

Query: 41  CQNHHCKHGKVCELDENNSPMCVCQDPTSCPAPIGEFEKVCSNDNKTFDSSCHFFATKCT 220
           C++  C     C +D+ N+  CV  +   CP P    + +C ND  T+ S+CH     C 
Sbjct: 168 CRDVFCPGSSTCVVDQTNNAYCVTCNRI-CPEPASSEQYLCGNDGVTYSSACHLRKATCL 226

Query: 221 LEGTKKGHKLHLDYIGPCKYIPPCLDSELT 310
           L     G  + L Y G C     C D + T
Sbjct: 227 L-----GRSIGLAYEGKCIKAKSCEDIQCT 251


>ref|NP_006341.1| follistatin isoform FST317 precursor [Homo sapiens].
          Length = 317

 Score = 51.6 bits (122), Expect = 3e-06
 Identities = 27/90 (30%), Positives = 39/90 (43%)
 Frame = +2

Query: 41  CQNHHCKHGKVCELDENNSPMCVCQDPTSCPAPIGEFEKVCSNDNKTFDSSCHFFATKCT 220
           C++  C     C +D+ N+  CV  +   CP P    + +C ND  T+ S+CH     C 
Sbjct: 168 CRDVFCPGSSTCVVDQTNNAYCVTCNRI-CPEPASSEQYLCGNDGVTYSSACHLRKATCL 226

Query: 221 LEGTKKGHKLHLDYIGPCKYIPPCLDSELT 310
           L     G  + L Y G C     C D + T
Sbjct: 227 L-----GRSIGLAYEGKCIKAKSCEDIQCT 251


  Database: RefSeq49_HP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,297,164
  Number of sequences in database:  32,964
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 69,273,629
Number of extensions: 1839723
Number of successful extensions: 6805
Number of sequences better than 1.0e-05: 13
Number of HSP's gapped: 6724
Number of HSP's successfully gapped: 13
Length of query: 635
Length of database: 18,297,164
Length adjustment: 109
Effective length of query: 526
Effective length of database: 14,704,088
Effective search space: 7734350288
Effective search space used: 7734350288
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

Search to RefSeqMP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-000127
         (1906 letters)

Database: RefSeq49_MP.fasta 
           30,036 sequences; 15,617,559 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_033268.1| SPARC precursor [Mus musculus].                      499   e-141
Alignment   gi|NP_034227.3| SPARC-like protein 1 precursor [Mus musculus].       319   4e-87
Alignment   gi|NP_076178.1| testican-3 precursor [Mus musculus].                  60   6e-09
Alignment   gi|NP_001159938.1| testican-1 isoform 2 precursor [Mus musculus].     57   5e-08

>ref|NP_033268.1| SPARC precursor [Mus musculus].
          Length = 302

 Score =  499 bits (1285), Expect = e-141
 Identities = 227/234 (97%), Positives = 232/234 (99%)
 Frame = +2

Query: 35  NPCQNHHCKHGKVCELDENNSPMCVCQDPTSCPAPIGEFEKVCSNDNKTFDSSCHFFATK 214
           NPCQNHHCKHGKVCELDE+N+PMCVCQDPTSCPAPIGEFEKVCSNDNKTFDSSCHFFATK
Sbjct: 69  NPCQNHHCKHGKVCELDESNTPMCVCQDPTSCPAPIGEFEKVCSNDNKTFDSSCHFFATK 128

Query: 215 CTLEGTKKGHKLHLDYIGPCKYIPPCLDSELTEFPLRMRDWLKNVLVTLYERDENNNLLT 394
           CTLEGTKKGHKLHLDYIGPCKYI PCLDSELTEFPLRMRDWLKNVLVTLYERDE NNLLT
Sbjct: 129 CTLEGTKKGHKLHLDYIGPCKYIAPCLDSELTEFPLRMRDWLKNVLVTLYERDEGNNLLT 188

Query: 395 EKQKLRVKKIHENEKRLEAGDHPVELLARDFEKNYNMYIFPVHWQFGQLDQHPIDGYLSH 574
           EKQKLRVKKIHENEKRLEAGDHPVELLARDFEKNYNMYIFPVHWQFGQLDQHPIDGYLSH
Sbjct: 189 EKQKLRVKKIHENEKRLEAGDHPVELLARDFEKNYNMYIFPVHWQFGQLDQHPIDGYLSH 248

Query: 575 TELAPLRAPLIPMEHCTTRFFQTCDLDNDKYIALDEWAGCFGIKEQDIDKDLVI 736
           TELAPLRAPLIPMEHCTTRFF+TCDLDNDKYIAL+EWAGCFGIKEQDI+KDLVI
Sbjct: 249 TELAPLRAPLIPMEHCTTRFFETCDLDNDKYIALEEWAGCFGIKEQDINKDLVI 302


>ref|NP_034227.3| SPARC-like protein 1 precursor [Mus musculus].
          Length = 650

 Score =  319 bits (818), Expect = 4e-87
 Identities = 142/232 (61%), Positives = 177/232 (76%), Gaps = 1/232 (0%)
 Frame = +2

Query: 41   CQNHHCKHGKVCELDENNSPMCVCQDPTSCPAPIGEFEKVCSNDNKTFDSSCHFFATKCT 220
            C N  CK G +C+ D    P CVCQDP +CP P    ++ C  DN+T+ SSCH FATKC 
Sbjct: 419  CTNFQCKRGHICKTDPQGKPHCVCQDPETCP-PAKILDQACGTDNQTYASSCHLFATKCR 477

Query: 221  LEGTKKGHKLHLDYIGPCKYIPPCLDSELTEFPLRMRDWLKNVLVTLYERD-ENNNLLTE 397
            LEGTKKGH+L LDY G CK IP C D E+ +FPLRMRDWLKN+L+ LYE + ++   L E
Sbjct: 478  LEGTKKGHQLQLDYFGACKSIPACTDFEVAQFPLRMRDWLKNILMQLYEPNPKHGGYLNE 537

Query: 398  KQKLRVKKIHENEKRLEAGDHPVELLARDFEKNYNMYIFPVHWQFGQLDQHPIDGYLSHT 577
            KQ+ +VKKI+ +EKRL AGDHP+ELL RDF+KNY+MY++PVHWQF +LDQHP D  L+H+
Sbjct: 538  KQRSKVKKIYLDEKRLLAGDHPIELLLRDFKKNYHMYVYPVHWQFNELDQHPADRILTHS 597

Query: 578  ELAPLRAPLIPMEHCTTRFFQTCDLDNDKYIALDEWAGCFGIKEQDIDKDLV 733
            ELAPLRA L+PMEHC TRFF+ CD + DK+I L EW  CFGIKE+DID++L+
Sbjct: 598  ELAPLRASLVPMEHCITRFFEECDPNKDKHITLKEWGHCFGIKEEDIDENLL 649


>ref|NP_076178.1| testican-3 precursor [Mus musculus].
          Length = 436

 Score = 60.1 bits (144), Expect = 6e-09
 Identities = 63/265 (23%), Positives = 90/265 (33%), Gaps = 38/265 (14%)
 Frame = +2

Query: 35  NPCQNHHCKHGKVCELDENNSPMCVCQ---------------------DPTSCPAPIGEF 151
           +PC    C   KVC   +  + +C+                         T  P PI   
Sbjct: 88  DPCLKTKCSRHKVCITQDAQTALCISHRRLTHSMKEVGGSHKQWRGLPSSTCKPCPIAYA 147

Query: 152 EKVCSNDNKTFDSSCHFFATKCTLEGTKKGHKLHLDYIGPC------------KYIPPCL 295
             VC +D  ++ S C      C L     G ++ +   G C                 C 
Sbjct: 148 SPVCGSDGHSYSSQCKLEYQACVL-----GKQISIKCEGRCPCPSDKSMNIGRNVKRACS 202

Query: 296 DSELTEFPLRMRDWLKNVLVTLYERDENNNLLTEKQKLRVKKIHENEKRLEAGDHPVELL 475
           D E  E   R+RDW K     L+E    N                  K+ +A       L
Sbjct: 203 DLEFREVANRLRDWFK----ALHESGSQN------------------KKTKA-------L 233

Query: 476 ARDFEKNYNMYIFPV-----HWQFGQLDQHPIDGYLSHTELAPLRAPLIPMEHCTTRFFQ 640
            R     ++  I P+      W F +LD +  D  L  +EL  +   L   E CT  FF 
Sbjct: 234 LRPERSRFDTSILPICKDSLGWMFNRLDTN-YDLLLDQSELGSIY--LDKNEQCTKAFFN 290

Query: 641 TCDLDNDKYIALDEWAGCFGIKEQD 715
           +CD   D  I+ +EW  CF  ++QD
Sbjct: 291 SCDTYKDSLISNNEWCYCFQ-RQQD 314


>ref|NP_001159938.1| testican-1 isoform 2 precursor [Mus musculus].
          Length = 441

 Score = 57.0 bits (136), Expect = 5e-08
 Identities = 56/260 (21%), Positives = 90/260 (34%), Gaps = 39/260 (15%)
 Frame = +2

Query: 35  NPCQNHHCKHGKVCELDENNSPMCVCQD------------------PTSC----PAPIGE 148
           +PC    C   KVC   +  + +CV +                   P++     P P+ +
Sbjct: 87  DPCLKVKCSPHKVCVTQDYQTALCVSRKHLLPRQKKGNVAHKHWLGPSNLVKCKPCPVAQ 146

Query: 149 FEKVCSNDNKTFDSSCHFFATKCTLEGTKKGHKLHLDYIGPCKYIPP------------C 292
              VC +D  T+ S C     K        G  L+    GPC  +P             C
Sbjct: 147 SAMVCGSDGHTYTSKC-----KLEFHACSTGKSLNSLCDGPCPCLPEPEPLKPKAEKSAC 201

Query: 293 LDSELTEFPLRMRDWLKNVLVTLYERDENNNLLTEKQKLRVKKIHENEKRLEAGDHPVEL 472
            D EL     R++DW                            +HE+  R+      ++ 
Sbjct: 202 TDKELRNLASRLKDWFG-------------------------ALHEDANRV------IKP 230

Query: 473 LARDFEKNYNMYIFPV-----HWQFGQLDQHPIDGYLSHTELAPLRAPLIPMEHCTTRFF 637
            + D  + ++  I P+      W F +LD +  D  L H+E+  +   L   E C    F
Sbjct: 231 TSSDPAQGFDTSILPICKDSLGWMFNKLDMN-YDLLLDHSEINAIY--LDKYEPCIKPLF 287

Query: 638 QTCDLDNDKYIALDEWAGCF 697
            +CD   D  ++ +EW  CF
Sbjct: 288 NSCDSFKDGKLSNNEWCYCF 307


  Database: RefSeq49_MP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 15,617,559
  Number of sequences in database:  30,036
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 58,722,235
Number of extensions: 1545579
Number of successful extensions: 6256
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 5993
Number of HSP's successfully gapped: 4
Length of query: 635
Length of database: 15,617,559
Length adjustment: 108
Effective length of query: 527
Effective length of database: 12,373,671
Effective search space: 6520924617
Effective search space used: 6520924617
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

Search to RefSeqSP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-000127
         (1906 letters)

Database: RefSeq49_SP.fasta 
           24,897 sequences; 11,343,932 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001026964.1| SPARC precursor [Sus scrofa].                     512   e-145
Alignment   gi|XP_003134185.2| PREDICTED: SPARC-like isoform 1 [Sus scrofa].     496   e-140
Alignment   gi|XP_003361338.1| PREDICTED: SPARC-like isoform 2 [Sus scrofa].     496   e-140
Alignment   gi|NP_001090891.1| SPARC-like protein 1 [Sus scrofa].                313   2e-85
Alignment   gi|XP_003357144.1| PREDICTED: SPARC-like protein 1-like [Sus sc...   310   1e-84
Alignment   gi|XP_001927803.1| PREDICTED: testican-3 isoform 3 [Sus scrofa].      56   6e-08
Alignment   gi|XP_001927799.1| PREDICTED: testican-3 isoform 2 [Sus scrofa].      56   6e-08
Alignment   gi|XP_001927792.1| PREDICTED: testican-3 isoform 1 [Sus scrofa].      56   6e-08
Alignment   gi|XP_001925956.2| PREDICTED: testican-2 [Sus scrofa].                52   9e-07
Alignment   gi|NP_001003662.1| follistatin precursor [Sus scrofa].                52   2e-06

>ref|NP_001026964.1| SPARC precursor [Sus scrofa].
          Length = 300

 Score =  512 bits (1319), Expect = e-145
 Identities = 234/234 (100%), Positives = 234/234 (100%)
 Frame = +2

Query: 35  NPCQNHHCKHGKVCELDENNSPMCVCQDPTSCPAPIGEFEKVCSNDNKTFDSSCHFFATK 214
           NPCQNHHCKHGKVCELDENNSPMCVCQDPTSCPAPIGEFEKVCSNDNKTFDSSCHFFATK
Sbjct: 67  NPCQNHHCKHGKVCELDENNSPMCVCQDPTSCPAPIGEFEKVCSNDNKTFDSSCHFFATK 126

Query: 215 CTLEGTKKGHKLHLDYIGPCKYIPPCLDSELTEFPLRMRDWLKNVLVTLYERDENNNLLT 394
           CTLEGTKKGHKLHLDYIGPCKYIPPCLDSELTEFPLRMRDWLKNVLVTLYERDENNNLLT
Sbjct: 127 CTLEGTKKGHKLHLDYIGPCKYIPPCLDSELTEFPLRMRDWLKNVLVTLYERDENNNLLT 186

Query: 395 EKQKLRVKKIHENEKRLEAGDHPVELLARDFEKNYNMYIFPVHWQFGQLDQHPIDGYLSH 574
           EKQKLRVKKIHENEKRLEAGDHPVELLARDFEKNYNMYIFPVHWQFGQLDQHPIDGYLSH
Sbjct: 187 EKQKLRVKKIHENEKRLEAGDHPVELLARDFEKNYNMYIFPVHWQFGQLDQHPIDGYLSH 246

Query: 575 TELAPLRAPLIPMEHCTTRFFQTCDLDNDKYIALDEWAGCFGIKEQDIDKDLVI 736
           TELAPLRAPLIPMEHCTTRFFQTCDLDNDKYIALDEWAGCFGIKEQDIDKDLVI
Sbjct: 247 TELAPLRAPLIPMEHCTTRFFQTCDLDNDKYIALDEWAGCFGIKEQDIDKDLVI 300


>ref|XP_003134185.2| PREDICTED: SPARC-like isoform 1 [Sus scrofa].
          Length = 300

 Score =  496 bits (1277), Expect = e-140
 Identities = 226/234 (96%), Positives = 228/234 (97%)
 Frame = +2

Query: 35  NPCQNHHCKHGKVCELDENNSPMCVCQDPTSCPAPIGEFEKVCSNDNKTFDSSCHFFATK 214
           NPCQNHHCKHGKVCELDENNSPMCVCQDPTSCPAP     +VCSNDNKTFDSSCHFFATK
Sbjct: 67  NPCQNHHCKHGKVCELDENNSPMCVCQDPTSCPAPXXXXRQVCSNDNKTFDSSCHFFATK 126

Query: 215 CTLEGTKKGHKLHLDYIGPCKYIPPCLDSELTEFPLRMRDWLKNVLVTLYERDENNNLLT 394
           CTLEGTKKGHKLHLDYIGPCKYIPPCLDSELTEFPLRMRDWLKNVLVTLYERDENNNLLT
Sbjct: 127 CTLEGTKKGHKLHLDYIGPCKYIPPCLDSELTEFPLRMRDWLKNVLVTLYERDENNNLLT 186

Query: 395 EKQKLRVKKIHENEKRLEAGDHPVELLARDFEKNYNMYIFPVHWQFGQLDQHPIDGYLSH 574
           EKQKLRVKKIHENEKRLEAGDHPVELLARDFEKNYNMYIFPVHWQFGQLDQHPIDGYL+H
Sbjct: 187 EKQKLRVKKIHENEKRLEAGDHPVELLARDFEKNYNMYIFPVHWQFGQLDQHPIDGYLTH 246

Query: 575 TELAPLRAPLIPMEHCTTRFFQTCDLDNDKYIALDEWAGCFGIKEQDIDKDLVI 736
           TEL PLRAPLIPMEHCTTRFFQTCDLDNDKYIALDEWAGCFGIKEQDIDKDLVI
Sbjct: 247 TELXPLRAPLIPMEHCTTRFFQTCDLDNDKYIALDEWAGCFGIKEQDIDKDLVI 300


>ref|XP_003361338.1| PREDICTED: SPARC-like isoform 2 [Sus scrofa].
          Length = 303

 Score =  496 bits (1277), Expect = e-140
 Identities = 226/234 (96%), Positives = 228/234 (97%)
 Frame = +2

Query: 35  NPCQNHHCKHGKVCELDENNSPMCVCQDPTSCPAPIGEFEKVCSNDNKTFDSSCHFFATK 214
           NPCQNHHCKHGKVCELDENNSPMCVCQDPTSCPAP     +VCSNDNKTFDSSCHFFATK
Sbjct: 70  NPCQNHHCKHGKVCELDENNSPMCVCQDPTSCPAPXXXXRQVCSNDNKTFDSSCHFFATK 129

Query: 215 CTLEGTKKGHKLHLDYIGPCKYIPPCLDSELTEFPLRMRDWLKNVLVTLYERDENNNLLT 394
           CTLEGTKKGHKLHLDYIGPCKYIPPCLDSELTEFPLRMRDWLKNVLVTLYERDENNNLLT
Sbjct: 130 CTLEGTKKGHKLHLDYIGPCKYIPPCLDSELTEFPLRMRDWLKNVLVTLYERDENNNLLT 189

Query: 395 EKQKLRVKKIHENEKRLEAGDHPVELLARDFEKNYNMYIFPVHWQFGQLDQHPIDGYLSH 574
           EKQKLRVKKIHENEKRLEAGDHPVELLARDFEKNYNMYIFPVHWQFGQLDQHPIDGYL+H
Sbjct: 190 EKQKLRVKKIHENEKRLEAGDHPVELLARDFEKNYNMYIFPVHWQFGQLDQHPIDGYLTH 249

Query: 575 TELAPLRAPLIPMEHCTTRFFQTCDLDNDKYIALDEWAGCFGIKEQDIDKDLVI 736
           TEL PLRAPLIPMEHCTTRFFQTCDLDNDKYIALDEWAGCFGIKEQDIDKDLVI
Sbjct: 250 TELXPLRAPLIPMEHCTTRFFQTCDLDNDKYIALDEWAGCFGIKEQDIDKDLVI 303


>ref|NP_001090891.1| SPARC-like protein 1 [Sus scrofa].
          Length = 662

 Score =  313 bits (803), Expect = 2e-85
 Identities = 141/232 (60%), Positives = 177/232 (76%), Gaps = 1/232 (0%)
 Frame = +2

Query: 41   CQNHHCKHGKVCELDENNSPMCVCQDPTSCPAPIGEFEKVCSNDNKTFDSSCHFFATKCT 220
            C +  CK G +C+ D+   P CVCQDP +CP P    ++VC  DN+T+ SSCH FATKC 
Sbjct: 431  CMSFQCKRGHICKADQQGKPHCVCQDPVTCP-PTKLLDQVCGTDNQTYASSCHLFATKCR 489

Query: 221  LEGTKKGHKLHLDYIGPCKYIPPCLDSELTEFPLRMRDWLKNVLVTLYERD-ENNNLLTE 397
            LEGTKKGH+L LDY G CK IP C D E+T+FPLRMRDWLKN+L+ LYE + E+   L E
Sbjct: 490  LEGTKKGHQLQLDYFGACKSIPACTDFEVTQFPLRMRDWLKNILMQLYEPNPEHAGYLNE 549

Query: 398  KQKLRVKKIHENEKRLEAGDHPVELLARDFEKNYNMYIFPVHWQFGQLDQHPIDGYLSHT 577
            KQ+ +VKKI+ +EKRL AGDH ++LL RDF+KNY+MY++PVHWQF +LDQHP D  L+H+
Sbjct: 550  KQRNKVKKIYLDEKRLLAGDHSIDLLLRDFKKNYHMYVYPVHWQFSELDQHPRDRVLTHS 609

Query: 578  ELAPLRAPLIPMEHCTTRFFQTCDLDNDKYIALDEWAGCFGIKEQDIDKDLV 733
            ELAPLRA L+PMEHC TRFF  CD + DK+I L EW  CF IKE+DID++L+
Sbjct: 610  ELAPLRASLVPMEHCITRFFGECDPNKDKHITLKEWGRCFEIKEEDIDENLL 661


>ref|XP_003357144.1| PREDICTED: SPARC-like protein 1-like [Sus scrofa].
          Length = 705

 Score =  310 bits (795), Expect = 1e-84
 Identities = 140/232 (60%), Positives = 176/232 (75%), Gaps = 1/232 (0%)
 Frame = +2

Query: 41   CQNHHCKHGKVCELDENNSPMCVCQDPTSCPAPIGEFEKVCSNDNKTFDSSCHFFATKCT 220
            C +  CK G +C+ D+   P CVCQDP +CP P    ++VC  DN+T+ SSCH FATKC 
Sbjct: 474  CMSFQCKRGHICKADQQGKPHCVCQDPVTCP-PTKLLDQVCGTDNQTYASSCHLFATKCR 532

Query: 221  LEGTKKGHKLHLDYIGPCKYIPPCLDSELTEFPLRMRDWLKNVLVTLYERD-ENNNLLTE 397
            LEGTKK H+L LDY G CK IP C D E+T+FPLRMRDWLKN+L+ LYE + E+   L E
Sbjct: 533  LEGTKKEHQLQLDYFGACKSIPACTDFEVTQFPLRMRDWLKNILMQLYEPNPEHAGYLNE 592

Query: 398  KQKLRVKKIHENEKRLEAGDHPVELLARDFEKNYNMYIFPVHWQFGQLDQHPIDGYLSHT 577
            KQ+ +VKKI+ +EKRL AGDH ++LL RDF+KNY+MY++PVHWQF +LDQHP D  L+H+
Sbjct: 593  KQRNKVKKIYLDEKRLLAGDHSIDLLLRDFKKNYHMYVYPVHWQFSELDQHPRDRVLTHS 652

Query: 578  ELAPLRAPLIPMEHCTTRFFQTCDLDNDKYIALDEWAGCFGIKEQDIDKDLV 733
            ELAPLRA L+PMEHC TRFF  CD + DK+I L EW  CF IKE+DID++L+
Sbjct: 653  ELAPLRASLVPMEHCITRFFGECDPNKDKHITLKEWGRCFEIKEEDIDENLL 704


>ref|XP_001927803.1| PREDICTED: testican-3 isoform 3 [Sus scrofa].
          Length = 427

 Score = 56.2 bits (134), Expect = 6e-08
 Identities = 62/260 (23%), Positives = 95/260 (36%), Gaps = 33/260 (12%)
 Frame = +2

Query: 35  NPCQNHHCKHGKVCELDENNSPMCVCQ--------------------DPTSCPAPIG-EF 151
           +PC N  C   +VC +  + + +C+ Q                     P++C   +G   
Sbjct: 82  DPCLNMKCGRHEVCIVQGSGTAVCIGQRRLAHSVKDAGAGHKQRRGPPPSTCRQCLGVSM 141

Query: 152 EKVCSNDNKTFDSSCHFFATKCTLEGTKKGHKLHLDYIGPCKYIPP------------CL 295
             VC +D   + S C      C L     G ++ +   G C                 C 
Sbjct: 142 SPVCGSDGHAYSSQCKLEYQACVL-----GKQISVRCEGHCPCPSDTTRSSRGNVKRVCT 196

Query: 296 DSELTEFPLRMRDWLKNVLVTLYERDENNNLLTEKQKLRVKKIHENEKRLEAGDHPVELL 475
             E  E   R+RDW K     L+E    N     K  LR ++      R +    P+   
Sbjct: 197 SLEFREVSTRLRDWFK----ALHESGSQNK--KAKGSLRPER-----SRFDTSILPI--- 242

Query: 476 ARDFEKNYNMYIFPVHWQFGQLDQHPIDGYLSHTELAPLRAPLIPMEHCTTRFFQTCDLD 655
            +D           + W F +LD +  D  L  +EL  +   L   E CT  FF +CD  
Sbjct: 243 CKD----------SLGWMFNRLDTN-YDLLLDQSELGSIY--LDKNEQCTEAFFNSCDTY 289

Query: 656 NDKYIALDEWAGCFGIKEQD 715
            D+ I+ +EW  CF  ++QD
Sbjct: 290 RDRSISNNEWCYCFQ-RQQD 308


>ref|XP_001927799.1| PREDICTED: testican-3 isoform 2 [Sus scrofa].
          Length = 424

 Score = 56.2 bits (134), Expect = 6e-08
 Identities = 62/260 (23%), Positives = 95/260 (36%), Gaps = 33/260 (12%)
 Frame = +2

Query: 35  NPCQNHHCKHGKVCELDENNSPMCVCQ--------------------DPTSCPAPIG-EF 151
           +PC N  C   +VC +  + + +C+ Q                     P++C   +G   
Sbjct: 79  DPCLNMKCGRHEVCIVQGSGTAVCIGQRRLAHSVKDAGAGHKQRRGPPPSTCRQCLGVSM 138

Query: 152 EKVCSNDNKTFDSSCHFFATKCTLEGTKKGHKLHLDYIGPCKYIPP------------CL 295
             VC +D   + S C      C L     G ++ +   G C                 C 
Sbjct: 139 SPVCGSDGHAYSSQCKLEYQACVL-----GKQISVRCEGHCPCPSDTTRSSRGNVKRVCT 193

Query: 296 DSELTEFPLRMRDWLKNVLVTLYERDENNNLLTEKQKLRVKKIHENEKRLEAGDHPVELL 475
             E  E   R+RDW K     L+E    N     K  LR ++      R +    P+   
Sbjct: 194 SLEFREVSTRLRDWFK----ALHESGSQNK--KAKGSLRPER-----SRFDTSILPI--- 239

Query: 476 ARDFEKNYNMYIFPVHWQFGQLDQHPIDGYLSHTELAPLRAPLIPMEHCTTRFFQTCDLD 655
            +D           + W F +LD +  D  L  +EL  +   L   E CT  FF +CD  
Sbjct: 240 CKD----------SLGWMFNRLDTN-YDLLLDQSELGSIY--LDKNEQCTEAFFNSCDTY 286

Query: 656 NDKYIALDEWAGCFGIKEQD 715
            D+ I+ +EW  CF  ++QD
Sbjct: 287 RDRSISNNEWCYCFQ-RQQD 305


>ref|XP_001927792.1| PREDICTED: testican-3 isoform 1 [Sus scrofa].
          Length = 424

 Score = 56.2 bits (134), Expect = 6e-08
 Identities = 62/260 (23%), Positives = 95/260 (36%), Gaps = 33/260 (12%)
 Frame = +2

Query: 35  NPCQNHHCKHGKVCELDENNSPMCVCQ--------------------DPTSCPAPIG-EF 151
           +PC N  C   +VC +  + + +C+ Q                     P++C   +G   
Sbjct: 79  DPCLNMKCGRHEVCIVQGSGTAVCIGQRRLAHSVKDAGAGHKQRRGPPPSTCRQCLGVSM 138

Query: 152 EKVCSNDNKTFDSSCHFFATKCTLEGTKKGHKLHLDYIGPCKYIPP------------CL 295
             VC +D   + S C      C L     G ++ +   G C                 C 
Sbjct: 139 SPVCGSDGHAYSSQCKLEYQACVL-----GKQISVRCEGHCPCPSDTTRSSRGNVKRVCT 193

Query: 296 DSELTEFPLRMRDWLKNVLVTLYERDENNNLLTEKQKLRVKKIHENEKRLEAGDHPVELL 475
             E  E   R+RDW K     L+E    N     K  LR ++      R +    P+   
Sbjct: 194 SLEFREVSTRLRDWFK----ALHESGSQNK--KAKGSLRPER-----SRFDTSILPI--- 239

Query: 476 ARDFEKNYNMYIFPVHWQFGQLDQHPIDGYLSHTELAPLRAPLIPMEHCTTRFFQTCDLD 655
            +D           + W F +LD +  D  L  +EL  +   L   E CT  FF +CD  
Sbjct: 240 CKD----------SLGWMFNRLDTN-YDLLLDQSELGSIY--LDKNEQCTEAFFNSCDTY 286

Query: 656 NDKYIALDEWAGCFGIKEQD 715
            D+ I+ +EW  CF  ++QD
Sbjct: 287 RDRSISNNEWCYCFQ-RQQD 305


>ref|XP_001925956.2| PREDICTED: testican-2 [Sus scrofa].
          Length = 413

 Score = 52.4 bits (124), Expect = 9e-07
 Identities = 56/252 (22%), Positives = 83/252 (32%), Gaps = 31/252 (12%)
 Frame = +2

Query: 35  NPCQNHHCKHGKVCELDENNSPMCVCQDP-----------------TSC-PAPIGEFEKV 160
           +PCQ   C   KVC        MC+ +                   T+C P  + +   V
Sbjct: 77  DPCQKVKCSRHKVCIAQGYQRAMCISRKKLEHRIKQPALKLHGNKDTACKPCHMAQLASV 136

Query: 161 CSNDNKTFDSSCHFFATKCTLEGTKKGHKLHLDYIGPCKYIPP-------------CLDS 301
           C +D  T+ S C      C         +L +   GPC                  C   
Sbjct: 137 CGSDGHTYSSVCKLEQQACL-----SSKQLTVRCEGPCPCPTEQAATSTADGKPETCTGQ 191

Query: 302 ELTEFPLRMRDWLKNVLVTLYERDENNNLLTEKQKLRVKKIHENEKRLEAGDHPVELLAR 481
           +L +   R+RDW +     L+E  + N  ++    L               D  +    +
Sbjct: 192 DLADLGDRLRDWFQ----LLHENSKQNGSVSSGANLA-----------SGLDKSLGASCK 236

Query: 482 DFEKNYNMYIFPVHWQFGQLDQHPIDGYLSHTELAPLRAPLIPMEHCTTRFFQTCDLDND 661
           D           + W F +LD    D +L   ELA +   L   E C   FF +CD   D
Sbjct: 237 D----------SIGWMFSKLDTSA-DLFLDQMELAAIN--LDKYEVCIRPFFNSCDTYKD 283

Query: 662 KYIALDEWAGCF 697
             ++  EW  CF
Sbjct: 284 GRVSTAEWCFCF 295


>ref|NP_001003662.1| follistatin precursor [Sus scrofa].
          Length = 344

 Score = 51.6 bits (122), Expect = 2e-06
 Identities = 27/90 (30%), Positives = 39/90 (43%)
 Frame = +2

Query: 41  CQNHHCKHGKVCELDENNSPMCVCQDPTSCPAPIGEFEKVCSNDNKTFDSSCHFFATKCT 220
           C++  C     C +D+ N+  CV  +   CP P    + +C ND  T+ S+CH     C 
Sbjct: 168 CRDVFCPGSSTCVVDQTNNAYCVTCNRI-CPEPTSSGQYLCGNDGVTYSSACHLRKATCL 226

Query: 221 LEGTKKGHKLHLDYIGPCKYIPPCLDSELT 310
           L     G  + L Y G C     C D + T
Sbjct: 227 L-----GRSIGLAYEGKCIKAKSCEDIQCT 251


  Database: RefSeq49_SP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 11,343,932
  Number of sequences in database:  24,897
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 43,997,645
Number of extensions: 1230807
Number of successful extensions: 4353
Number of sequences better than 1.0e-05: 11
Number of HSP's gapped: 4288
Number of HSP's successfully gapped: 12
Length of query: 635
Length of database: 11,343,932
Length adjustment: 105
Effective length of query: 530
Effective length of database: 8,729,747
Effective search space: 4626765910
Effective search space used: 4626765910
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

Search to Sscrofa10_2

BLASTN 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-000127
         (1906 letters)

Database: Sscrofa_10.2.fasta 
           4582 sequences; 2,808,509,378 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Sscrofa_Chr16                                                        1820   0.0  
gb|GL894053.2| Sus scrofa unplaced genomic scaffold ChrUScaf1937      813   0.0  

>Sscrofa_Chr16 
||          Length = 86898991

 Score = 1820 bits (918), Expect = 0.0
 Identities = 1016/1065 (95%)
 Strand = Plus / Plus

                                                                            
Query: 804      aatgtttaaaatgtttggatggtttgtcgttctgcctggggacaaggtgctaatatagat 863
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77607663 aatgtttaaaatgtttggatggtttgtcgttctgcctggggacaaggtgctaatatagat 77607722

                                                                            
Query: 864      ttcaatgaatacattaacggtgctaaacagggaaattttaacccaagtcatgacattctt 923
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77607723 ttcaatgaatacattaacggtgctaaacagggaaattttaacccaagtcatgacattctt 77607782

                                                                            
Query: 924      agctgtaactcagctcgcacggcctcttgctcacccactaaggagcccatttctctcttg 983
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77607783 agctgtaactcagctcgcacggcctcttgctcacccactaaggagcccatttctctcttg 77607842

                                                                            
Query: 984      ccatttgcagctcttgccccttgtcttagtgacgtgtgggtggaaactgatctgttcaag 1043
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77607843 ccatttgcagctcttgccccttgtcttagtgacgtgtgggtggaaactgatctgttcaag 77607902

                                                                            
Query: 1044     tctgccttcaacgcacgttgcatctccgattttcattcttttctgtttgaaactaacact 1103
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77607903 tctgccttcaacgcacgttgcatctccgattttcattcttttctgtttgaaactaacact 77607962

                                                                            
Query: 1104     cacagagagagattttgtgttaattacatgtcagggtattggctgccagggattcatgcc 1163
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77607963 cacagagagagattttgtgttaattacatgtcagggtattggctgccagggattcatgcc 77608022

                                                                            
Query: 1164     tgaaggtgggcaagggaagtcacagacccgtgacactggcaaggctcttcctggggctag 1223
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77608023 tgaaggtgggcaagggaagtcacagacccgtgacactggcaaggctcttcctggggctag 77608082

                                                                            
Query: 1224     aggatgagtggcgggagaaagttccagaacccaccagccagaagcccagataactgtctg 1283
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77608083 aggatgagtggcgggagaaagttccagaacccaccagccagaagcccagataactgtctg 77608142

                                                                            
Query: 1284     cccaaggctgtgtgatggaaatacagacgctctcgcctaaacccagttcctcaccacttc 1343
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77608143 cccaaggctgtgtgatggaaatacagacgctctcgcctaaacccagttcctcaccacttc 77608202

                                                                            
Query: 1344     ccctcacttttcagtgccatttcttcccacatttggctgtttgttcaaacttctcagagc 1403
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77608203 ccctcacttttcagtgccatttcttcccacatttggctgtttgttcaaacttctcagagc 77608262

                                                                            
Query: 1404     ccagagccatggaccatcagttctctggaatccaccacacctcnnnnnnnnnnnnnnnnn 1463
                |||||||||||||||||||||||||||||||||||||||||||                 
Sbjct: 77608263 ccagagccatggaccatcagttctctggaatccaccacacctcggggggcggggtggggg 77608322

                                                                            
Query: 1464     ctgtggatcactacatccgacaggggtgccccccgcaactatctttgggagacgcagaac 1523
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77608323 ctgtggatcactacatccgacaggggtgccccccgcaactatctttgggagacgcagaac 77608382

                                                                            
Query: 1524     tgggaggccaaaatcaagagtgaggcgcaggaagttgtaaaatagaaaaagtgcagttgg 1583
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77608383 tgggaggccaaaatcaagagtgaggcgcaggaagttgtaaaatagaaaaagtgcagttgg 77608442

                                                                            
Query: 1584     tgaagtggtttcgtttgtgggggcnnnnnnnnnnnnnnnnnccacatttggatacctatt 1643
                ||||||||||||||||||||||||                 |||||||||||||||||||
Sbjct: 77608443 tgaagtggtttcgtttgtgggggcttttgttttttctttttccacatttggatacctatt 77608502

                                                                            
Query: 1644     atgagggatctttcctttgctttctagcatgttnnnnnnnnnnnnnnnttttccctctat 1703
                |||||||||||||||||||||||||||||||||               ||||||||||||
Sbjct: 77608503 atgagggatctttcctttgctttctagcatgttcccccacccccccccttttccctctat 77608562

                                                                            
Query: 1704     taatcaagagaaacttcaaagtcaatgggatggtcggatctcacaggctgagaactcgtt 1763
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77608563 taatcaagagaaacttcaaagtcaatgggatggtcggatctcacaggctgagaactcgtt 77608622

                                                                            
Query: 1764     cacctccaagcatttcatgaaaaagctgcttcttattaatcatgcaaactcttgccacga 1823
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77608623 cacctccaagcatttcatgaaaaagctgcttcttattaatcatgcaaactcttgccacga 77608682

                                                             
Query: 1824     tgtgaagggtttgacaaatctttcaaaataaaaagtaatgactta 1868
                |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77608683 tgtgaagggtttgacaaatctttcaaaataaaaagtaatgactta 77608727



 Score =  301 bits (152), Expect = 7e-79
 Identities = 152/152 (100%)
 Strand = Plus / Plus

                                                                            
Query: 413      gtgaagaagatccacgagaatgagaagcgcctggaggccggagaccaccccgtggagctg 472
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77604793 gtgaagaagatccacgagaatgagaagcgcctggaggccggagaccaccccgtggagctg 77604852

                                                                            
Query: 473      ctggcccgggacttcgagaagaactacaacatgtacatcttccccgtgcactggcagttc 532
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77604853 ctggcccgggacttcgagaagaactacaacatgtacatcttccccgtgcactggcagttc 77604912

                                                
Query: 533      gggcagctggaccagcaccccattgatgggta 564
                ||||||||||||||||||||||||||||||||
Sbjct: 77604913 gggcagctggaccagcaccccattgatgggta 77604944



 Score =  297 bits (150), Expect = 1e-77
 Identities = 150/150 (100%)
 Strand = Plus / Plus

                                                                            
Query: 561      ggtacctgtctcacactgagctggccccactgcgtgcgcccctcatccccatggagcact 620
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77606948 ggtacctgtctcacactgagctggccccactgcgtgcgcccctcatccccatggagcact 77607007

                                                                            
Query: 621      gcaccacccgcttcttccagacctgcgacctggacaatgacaagtacattgccctggatg 680
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77607008 gcaccacccgcttcttccagacctgcgacctggacaatgacaagtacattgccctggatg 77607067

                                              
Query: 681      agtgggccggctgcttcggcatcaaggagc 710
                ||||||||||||||||||||||||||||||
Sbjct: 77607068 agtgggccggctgcttcggcatcaaggagc 77607097



 Score =  248 bits (125), Expect = 1e-62
 Identities = 125/125 (100%)
 Strand = Plus / Minus

                                                                            
Query: 290      tgcctggactccgagctgactgaattccccctgcgcatgcgggactggctcaagaacgtc 349
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77576990 tgcctggactccgagctgactgaattccccctgcgcatgcgggactggctcaagaacgtc 77576931

                                                                            
Query: 350      ctggtcaccttgtacgagagggatgagaacaacaaccttctgaccgagaagcagaagctg 409
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77576930 ctggtcaccttgtacgagagggatgagaacaacaaccttctgaccgagaagcagaagctg 77576871

                     
Query: 410      cgagt 414
                |||||
Sbjct: 77576870 cgagt 77576866



 Score =  246 bits (124), Expect = 4e-62
 Identities = 124/124 (100%)
 Strand = Plus / Minus

                                                                            
Query: 36       acccctgccagaaccaccactgcaaacacggcaaggtgtgcgagctggacgagaacaact 95
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77581264 acccctgccagaaccaccactgcaaacacggcaaggtgtgcgagctggacgagaacaact 77581205

                                                                            
Query: 96       cccccatgtgcgtgtgccaggaccccaccagctgccccgcccccatcggcgagtttgaga 155
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77581204 cccccatgtgcgtgtgccaggaccccaccagctgccccgcccccatcggcgagtttgaga 77581145

                    
Query: 156      aggt 159
                ||||
Sbjct: 77581144 aggt 77581141



 Score =  244 bits (123), Expect = 1e-61
 Identities = 123/123 (100%)
 Strand = Plus / Minus

                                                                            
Query: 156      aggtatgcagcaatgacaacaagacctttgactcttcctgccacttctttgccaccaagt 215
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77579363 aggtatgcagcaatgacaacaagacctttgactcttcctgccacttctttgccaccaagt 77579304

                                                                            
Query: 216      gcacactggagggcaccaagaagggccacaagctccacctggactacatcggaccttgca 275
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77579303 gcacactggagggcaccaagaagggccacaagctccacctggactacatcggaccttgca 77579244

                   
Query: 276      aat 278
                |||
Sbjct: 77579243 aat 77579241



 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 34/35 (97%)
 Strand = Plus / Minus

                                                   
Query: 1        tgctgaggaagccgaggaggaggtggcggctgaaa 35
                |||||||||||||||||||||||||| ||||||||
Sbjct: 77582727 tgctgaggaagccgaggaggaggtggtggctgaaa 77582693


>gb|GL894053.2| Sus scrofa unplaced genomic scaffold ChrUScaf1937
          Length = 64625

 Score =  813 bits (410), Expect = 0.0
 Identities = 514/565 (90%)
 Strand = Plus / Plus

                                                                         
Query: 1304  atacagacgctctcgcctaaacccagttcctcaccacttcccctcacttttcagtgccat 1363
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61621 atacagacgctctcgcctaaacccagttcctcaccacttcccctcacttttcagtgccat 61680

                                                                         
Query: 1364  ttcttcccacatttggctgtttgttcaaacttctcagagcccagagccatggaccatcag 1423
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61681 ttcttcccacatttggctgtttgttcaaacttctcagagcccagagccatggaccatcag 61740

                                                                         
Query: 1424  ttctctggaatccaccacacctcnnnnnnnnnnnnnnnnnctgtggatcactacatccga 1483
             |||||||||||||||||||||||                 ||||||||||||||||||||
Sbjct: 61741 ttctctggaatccaccacacctcggggggcagggtgggggctgtggatcactacatccga 61800

                                                                         
Query: 1484  caggggtgccccccgcaactatctttgggagacgcagaactgggaggccaaaatcaagag 1543
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61801 caggggtgccccccgcaactatctttgggagacgcagaactgggaggccaaaatcaagag 61860

                                                                         
Query: 1544  tgaggcgcaggaagttgtaaaatagaaaaagtgcagttggtgaagtggtttcgtttgtgg 1603
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61861 tgaggcgcaggaagttgtaaaatagaaaaagtgcagttggtgaagtggtttcgtttgtgg 61920

                                                                         
Query: 1604  gggcnnnnnnnnnnnnnnnnnccacatttggatacctattatgagggatctttcctttgc 1663
             ||||                 |||||||||||||||||||||||||||||||||||||||
Sbjct: 61921 gggcttttgttttttctttttccacatttggatacctattatgagggatctttcctttgc 61980

                                                                         
Query: 1664  tttctagcatgttnnnnnnnnnnnnnnnttttccctctattaatcaagagaaacttcaaa 1723
             ||||  |||||||               ||||||||||||||||||||||||||||||||
Sbjct: 61981 tttcaggcatgttcctccacccccccccttttccctctattaatcaagagaaacttcaaa 62040

                                                                         
Query: 1724  gtcaatgggatggtcggatctcacaggctgagaactcgttcacctccaagcatttcatga 1783
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62041 gtcaatgggatggtcggatctcacaggctgagaactcgttcacctccaagcatttcatga 62100

                                                                         
Query: 1784  aaaagctgcttcttattaatcatgcaaactcttgccacgatgtgaagggtttgacaaatc 1843
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62101 aaaagctgcttcttattaatcatgcaaactcttgccacgatgtgaagggtttgacaaatc 62160

                                      
Query: 1844  tttcaaaataaaaagtaatgactta 1868
             |||||||||||||||||||||||||
Sbjct: 62161 tttcaaaataaaaagtaatgactta 62185



 Score =  749 bits (378), Expect = 0.0
 Identities = 378/378 (100%)
 Strand = Plus / Plus

                                                                         
Query: 804   aatgtttaaaatgtttggatggtttgtcgttctgcctggggacaaggtgctaatatagat 863
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60950 aatgtttaaaatgtttggatggtttgtcgttctgcctggggacaaggtgctaatatagat 61009

                                                                         
Query: 864   ttcaatgaatacattaacggtgctaaacagggaaattttaacccaagtcatgacattctt 923
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61010 ttcaatgaatacattaacggtgctaaacagggaaattttaacccaagtcatgacattctt 61069

                                                                         
Query: 924   agctgtaactcagctcgcacggcctcttgctcacccactaaggagcccatttctctcttg 983
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61070 agctgtaactcagctcgcacggcctcttgctcacccactaaggagcccatttctctcttg 61129

                                                                         
Query: 984   ccatttgcagctcttgccccttgtcttagtgacgtgtgggtggaaactgatctgttcaag 1043
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61130 ccatttgcagctcttgccccttgtcttagtgacgtgtgggtggaaactgatctgttcaag 61189

                                                                         
Query: 1044  tctgccttcaacgcacgttgcatctccgattttcattcttttctgtttgaaactaacact 1103
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61190 tctgccttcaacgcacgttgcatctccgattttcattcttttctgtttgaaactaacact 61249

                                                                         
Query: 1104  cacagagagagattttgtgttaattacatgtcagggtattggctgccagggattcatgcc 1163
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61250 cacagagagagattttgtgttaattacatgtcagggtattggctgccagggattcatgcc 61309

                               
Query: 1164  tgaaggtgggcaagggaa 1181
             ||||||||||||||||||
Sbjct: 61310 tgaaggtgggcaagggaa 61327



 Score =  301 bits (152), Expect = 7e-79
 Identities = 152/152 (100%)
 Strand = Plus / Plus

                                                                         
Query: 413   gtgaagaagatccacgagaatgagaagcgcctggaggccggagaccaccccgtggagctg 472
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 57410 gtgaagaagatccacgagaatgagaagcgcctggaggccggagaccaccccgtggagctg 57469

                                                                         
Query: 473   ctggcccgggacttcgagaagaactacaacatgtacatcttccccgtgcactggcagttc 532
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 57470 ctggcccgggacttcgagaagaactacaacatgtacatcttccccgtgcactggcagttc 57529

                                             
Query: 533   gggcagctggaccagcaccccattgatgggta 564
             ||||||||||||||||||||||||||||||||
Sbjct: 57530 gggcagctggaccagcaccccattgatgggta 57561



 Score =  248 bits (125), Expect = 1e-62
 Identities = 125/125 (100%)
 Strand = Plus / Plus

                                                                         
Query: 290   tgcctggactccgagctgactgaattccccctgcgcatgcgggactggctcaagaacgtc 349
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56334 tgcctggactccgagctgactgaattccccctgcgcatgcgggactggctcaagaacgtc 56393

                                                                         
Query: 350   ctggtcaccttgtacgagagggatgagaacaacaaccttctgaccgagaagcagaagctg 409
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56394 ctggtcaccttgtacgagagggatgagaacaacaaccttctgaccgagaagcagaagctg 56453

                  
Query: 410   cgagt 414
             |||||
Sbjct: 56454 cgagt 56458



 Score =  244 bits (123), Expect = 1e-61
 Identities = 123/123 (100%)
 Strand = Plus / Plus

                                                                         
Query: 156   aggtatgcagcaatgacaacaagacctttgactcttcctgccacttctttgccaccaagt 215
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 54826 aggtatgcagcaatgacaacaagacctttgactcttcctgccacttctttgccaccaagt 54885

                                                                         
Query: 216   gcacactggagggcaccaagaagggccacaagctccacctggactacatcggaccttgca 275
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 54886 gcacactggagggcaccaagaagggccacaagctccacctggactacatcggaccttgca 54945

                
Query: 276   aat 278
             |||
Sbjct: 54946 aat 54948



 Score =  240 bits (121), Expect = 2e-60
 Identities = 124/125 (99%)
 Strand = Plus / Plus

                                                                         
Query: 586   cccactgcgtgcgcccctcatccccatggagcactgcaccacccgcttcttccagacctg 645
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60197 cccactgcgtgcgcccctcatccccatggagcactgcaccacccgcttcttccagacctg 60256

                                                                         
Query: 646   cgacctggacaatgacaagtacattgccctggatgagtgggccggctgcttcggcatcaa 705
             ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 60257 cgacctggacaatgacaagtacattgctctggatgagtgggccggctgcttcggcatcaa 60316

                  
Query: 706   ggagc 710
             |||||
Sbjct: 60317 ggagc 60321



 Score =  200 bits (101), Expect = 2e-48
 Identities = 104/105 (99%)
 Strand = Plus / Plus

                                                                         
Query: 36    acccctgccagaaccaccactgcaaacacggcaaggtgtgcgagctggacgagaacaact 95
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52619 acccctgccagaaccaccactgcaaacacggcaaggtgtgcgagctggacgagaacaact 52678

                                                          
Query: 96    cccccatgtgcgtgtgccaggaccccaccagctgccccgccccca 140
             ||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 52679 cccccatgtgcgtgtgccaggaccccaccagctgccctgccccca 52723



 Score =  184 bits (93), Expect = 1e-43
 Identities = 93/93 (100%)
 Strand = Plus / Plus

                                                                         
Query: 1185  acagacccgtgacactggcaaggctcttcctggggctagaggatgagtggcgggagaaag 1244
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61428 acagacccgtgacactggcaaggctcttcctggggctagaggatgagtggcgggagaaag 61487

                                              
Query: 1245  ttccagaacccaccagccagaagcccagataac 1277
             |||||||||||||||||||||||||||||||||
Sbjct: 61488 ttccagaacccaccagccagaagcccagataac 61520



 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 34/35 (97%)
 Strand = Plus / Plus

                                                
Query: 1     tgctgaggaagccgaggaggaggtggcggctgaaa 35
             |||||||||||||||||||||||||| ||||||||
Sbjct: 50756 tgctgaggaagccgaggaggaggtggtggctgaaa 50790



 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 30/30 (100%)
 Strand = Plus / Plus

                                           
Query: 711   aggacatcgacaaggatctcgtgatctaag 740
             ||||||||||||||||||||||||||||||
Sbjct: 60857 aggacatcgacaaggatctcgtgatctaag 60886


  Database: Sscrofa_10.2.fasta
    Posted date:  Nov 16, 2011 10:34 AM
  Number of letters in database: 2,808,509,378
  Number of sequences in database:  4582
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 51,498,870
Number of extensions: 437
Number of successful extensions: 437
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 437
Number of HSP's successfully gapped: 23
Length of query: 1906
Length of database: 2,808,509,378
Length adjustment: 22
Effective length of query: 1884
Effective length of database: 2,808,408,574
Effective search space: 5291041753416
Effective search space used: 5291041753416
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)