Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-000464
(1593 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001159977.1| tubulin alpha-1B chain [Bos taurus]. 874 0.0
Alignment gi|NP_001039875.1| tubulin alpha-1D chain [Bos taurus]. 871 0.0
Alignment gi|NP_001108328.1| tubulin alpha-1B chain [Bos taurus]. 870 0.0
Alignment gi|XP_002694727.1| PREDICTED: GL12416-like [Bos taurus]. 867 0.0
Alignment gi|XP_002701788.1| PREDICTED: GL12416-like [Bos taurus]. 867 0.0
Alignment gi|NP_001029376.1| tubulin alpha-1C chain [Bos taurus]. 865 0.0
Alignment gi|NP_001033252.1| tubulin alpha-3 chain [Bos taurus]. 865 0.0
Alignment gi|XP_001790595.1| PREDICTED: tubulin alpha-1C chain-like [Bos ... 862 0.0
Alignment gi|XP_001254236.1| PREDICTED: tubulin alpha-1C chain-like isofo... 862 0.0
Alignment gi|XP_002685663.1| PREDICTED: tubulin alpha-1C chain-like [Bos ... 860 0.0
>ref|NP_001159977.1| tubulin alpha-1B chain [Bos taurus].
Length = 451
Score = 874 bits (2258), Expect = 0.0
Identities = 428/440 (97%), Positives = 428/440 (97%)
Frame = +3
Query: 105 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 284
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 285 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 464
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 120
Query: 465 RIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTA 644
RIRKLADQCTGLQGFLVFH LLMERLSVDYGKKSKLEFSIYPAPQVSTA
Sbjct: 121 RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 180
Query: 645 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 824
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
Sbjct: 181 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 240
Query: 825 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 1004
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 300
Query: 1005 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 1184
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
Sbjct: 301 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 360
Query: 1185 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 1364
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
Query: 1365 AREDMAALEKDYEEVGVDSV 1424
AREDMAALEKDYEEVGVDSV
Sbjct: 421 AREDMAALEKDYEEVGVDSV 440
>ref|NP_001039875.1| tubulin alpha-1D chain [Bos taurus].
Length = 452
Score = 871 bits (2251), Expect = 0.0
Identities = 424/440 (96%), Positives = 428/440 (97%)
Frame = +3
Query: 105 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 284
MRECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
Sbjct: 1 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 285 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 464
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKE+IDLVLD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKELIDLVLD 120
Query: 465 RIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTA 644
RIRKLADQCTGLQGFL+FH LLMERLSVDYGKKSKLEFSIYPAPQVSTA
Sbjct: 121 RIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 180
Query: 645 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 824
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
Sbjct: 181 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 240
Query: 825 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 1004
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 300
Query: 1005 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 1184
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
Sbjct: 301 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 360
Query: 1185 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 1364
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
Query: 1365 AREDMAALEKDYEEVGVDSV 1424
AREDMAALEKDYEEVG+DSV
Sbjct: 421 AREDMAALEKDYEEVGMDSV 440
>ref|NP_001108328.1| tubulin alpha-1B chain [Bos taurus].
Length = 451
Score = 870 bits (2248), Expect = 0.0
Identities = 426/440 (96%), Positives = 427/440 (97%)
Frame = +3
Query: 105 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 284
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 285 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 464
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 120
Query: 465 RIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTA 644
RIRKLADQCTGLQGFLVFH LLMERLSVDYGKKSKLEFSIYPAPQVSTA
Sbjct: 121 RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 180
Query: 645 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 824
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLI QIVSSITA
Sbjct: 181 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA 240
Query: 825 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 1004
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 300
Query: 1005 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 1184
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKR+IQFVDWCPTGFKVGINYQPP
Sbjct: 301 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPP 360
Query: 1185 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 1364
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
Query: 1365 AREDMAALEKDYEEVGVDSV 1424
AREDMAALEKDYEEVGVDSV
Sbjct: 421 AREDMAALEKDYEEVGVDSV 440
>ref|XP_002694727.1| PREDICTED: GL12416-like [Bos taurus].
Length = 450
Score = 867 bits (2240), Expect = 0.0
Identities = 421/440 (95%), Positives = 427/440 (97%)
Frame = +3
Query: 105 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 284
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 285 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 464
HVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI+DLVLD
Sbjct: 61 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 120
Query: 465 RIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTA 644
RIRKLAD CTGLQGFL+FH LLMERLSVDYGKKSKLEF+IYPAPQVSTA
Sbjct: 121 RIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTA 180
Query: 645 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 824
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
Sbjct: 181 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 240
Query: 825 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 1004
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 300
Query: 1005 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 1184
QMVKCDPRHGKYMACC+LYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
Sbjct: 301 QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 360
Query: 1185 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 1364
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
Query: 1365 AREDMAALEKDYEEVGVDSV 1424
ARED+AALEKDYEEVGVDSV
Sbjct: 421 AREDLAALEKDYEEVGVDSV 440
>ref|XP_002701788.1| PREDICTED: GL12416-like [Bos taurus].
Length = 450
Score = 867 bits (2240), Expect = 0.0
Identities = 421/440 (95%), Positives = 427/440 (97%)
Frame = +3
Query: 105 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 284
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 285 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 464
HVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI+DLVLD
Sbjct: 61 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 120
Query: 465 RIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTA 644
RIRKLAD CTGLQGFL+FH LLMERLSVDYGKKSKLEF+IYPAPQVSTA
Sbjct: 121 RIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTA 180
Query: 645 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 824
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
Sbjct: 181 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 240
Query: 825 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 1004
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 300
Query: 1005 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 1184
QMVKCDPRHGKYMACC+LYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
Sbjct: 301 QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 360
Query: 1185 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 1364
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
Query: 1365 AREDMAALEKDYEEVGVDSV 1424
ARED+AALEKDYEEVGVDSV
Sbjct: 421 AREDLAALEKDYEEVGVDSV 440
>ref|NP_001029376.1| tubulin alpha-1C chain [Bos taurus].
Length = 449
Score = 865 bits (2235), Expect = 0.0
Identities = 421/439 (95%), Positives = 425/439 (96%)
Frame = +3
Query: 105 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 284
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 285 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 464
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLI+GKEDAANNYARGHYTIGKEIIDLVLD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNYARGHYTIGKEIIDLVLD 120
Query: 465 RIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTA 644
R+RKLADQCTGLQGFLVFH LLMERLSVDYGKKSKLEFSIYPAPQVSTA
Sbjct: 121 RVRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 180
Query: 645 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 824
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRL+ QIVSSITA
Sbjct: 181 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLMSQIVSSITA 240
Query: 825 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 1004
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 300
Query: 1005 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 1184
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
Sbjct: 301 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 360
Query: 1185 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 1364
TVVPGGDLAKVQRAVCMLSNTTA+AEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361 TVVPGGDLAKVQRAVCMLSNTTAVAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
Query: 1365 AREDMAALEKDYEEVGVDS 1421
AREDMAALEKDYEEVG DS
Sbjct: 421 AREDMAALEKDYEEVGADS 439
>ref|NP_001033252.1| tubulin alpha-3 chain [Bos taurus].
Length = 450
Score = 865 bits (2234), Expect = 0.0
Identities = 420/440 (95%), Positives = 426/440 (96%)
Frame = +3
Query: 105 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 284
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 285 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 464
HVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI+DLVLD
Sbjct: 61 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 120
Query: 465 RIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTA 644
RIRKLAD CTGLQGFL+FH LLMERLSVDYGKKSKLEF+IYPAPQVSTA
Sbjct: 121 RIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTA 180
Query: 645 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 824
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
Sbjct: 181 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 240
Query: 825 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 1004
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 300
Query: 1005 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 1184
QMVKCDPRHGKYMACC+LYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
Sbjct: 301 QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 360
Query: 1185 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 1364
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHK DLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKLDLMYAKRAFVHWYVGEGMEEGEFSE 420
Query: 1365 AREDMAALEKDYEEVGVDSV 1424
ARED+AALEKDYEEVGVDSV
Sbjct: 421 AREDLAALEKDYEEVGVDSV 440
>ref|XP_001790595.1| PREDICTED: tubulin alpha-1C chain-like [Bos taurus].
Length = 449
Score = 862 bits (2227), Expect = 0.0
Identities = 420/439 (95%), Positives = 424/439 (96%)
Frame = +3
Query: 105 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 284
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 285 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 464
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLI+GKEDAANNYARGHYTIGKEIIDLVLD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNYARGHYTIGKEIIDLVLD 120
Query: 465 RIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTA 644
R+RKLADQCTGLQGFLVFH LLMERLSVDYGKKSKLEFSIYPAPQVSTA
Sbjct: 121 RVRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 180
Query: 645 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 824
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTY NLNRL+ QIVSSITA
Sbjct: 181 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYMNLNRLMSQIVSSITA 240
Query: 825 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 1004
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 300
Query: 1005 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 1184
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
Sbjct: 301 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 360
Query: 1185 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 1364
TVVPGGDLAKV+RAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361 TVVPGGDLAKVERAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
Query: 1365 AREDMAALEKDYEEVGVDS 1421
AREDMAALEKDYEEVG DS
Sbjct: 421 AREDMAALEKDYEEVGADS 439
>ref|XP_001254236.1| PREDICTED: tubulin alpha-1C chain-like isoform 1 [Bos taurus].
Length = 449
Score = 862 bits (2227), Expect = 0.0
Identities = 420/439 (95%), Positives = 424/439 (96%)
Frame = +3
Query: 105 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 284
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 285 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 464
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLI+GKEDAANNYARGHYTIGKEIIDLVLD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNYARGHYTIGKEIIDLVLD 120
Query: 465 RIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTA 644
R+RKLADQCTGLQGFLVFH LLMERLSVDYGKKSKLEFSIYPAPQVSTA
Sbjct: 121 RVRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 180
Query: 645 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 824
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTY NLNRL+ QIVSSITA
Sbjct: 181 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYMNLNRLMSQIVSSITA 240
Query: 825 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 1004
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 300
Query: 1005 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 1184
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
Sbjct: 301 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 360
Query: 1185 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 1364
TVVPGGDLAKV+RAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361 TVVPGGDLAKVERAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
Query: 1365 AREDMAALEKDYEEVGVDS 1421
AREDMAALEKDYEEVG DS
Sbjct: 421 AREDMAALEKDYEEVGADS 439
>ref|XP_002685663.1| PREDICTED: tubulin alpha-1C chain-like [Bos taurus].
Length = 449
Score = 860 bits (2221), Expect = 0.0
Identities = 418/439 (95%), Positives = 424/439 (96%)
Frame = +3
Query: 105 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 284
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 285 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 464
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLI+GKEDAANNYARGHYTIGKEIIDLVLD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNYARGHYTIGKEIIDLVLD 120
Query: 465 RIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTA 644
R+RKLADQCTGLQGFLVFH LLMERLSVDYGKKSKLEFSIYPAPQVSTA
Sbjct: 121 RVRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 180
Query: 645 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 824
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNL+IERPTYTNLNRL+ QIVSSITA
Sbjct: 181 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLNIERPTYTNLNRLMSQIVSSITA 240
Query: 825 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 1004
SLRFDGALNVDLTEFQTNLVPYPR HFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPRTHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 300
Query: 1005 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 1184
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKT+RTIQFVDWCPTGFKVGINYQPP
Sbjct: 301 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTERTIQFVDWCPTGFKVGINYQPP 360
Query: 1185 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 1364
TVVPGGDLAKVQRAVCMLSNTTA+AEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361 TVVPGGDLAKVQRAVCMLSNTTAVAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
Query: 1365 AREDMAALEKDYEEVGVDS 1421
AREDMAALEKDYEEVG DS
Sbjct: 421 AREDMAALEKDYEEVGADS 439
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 62,227,734
Number of extensions: 1794653
Number of successful extensions: 7347
Number of sequences better than 1.0e-05: 35
Number of HSP's gapped: 7199
Number of HSP's successfully gapped: 42
Length of query: 531
Length of database: 17,681,374
Length adjustment: 107
Effective length of query: 424
Effective length of database: 14,140,958
Effective search space: 5995766192
Effective search space used: 5995766192
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-000464
(1593 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_862547.1| PREDICTED: similar to tubulin, alpha 1 isoform ... 874 0.0
Alignment gi|XP_862523.1| PREDICTED: similar to tubulin, alpha 1 isoform ... 874 0.0
Alignment gi|XP_534814.1| PREDICTED: similar to tubulin, alpha 1 isoform ... 874 0.0
Alignment gi|XP_851095.1| PREDICTED: similar to Tubulin alpha-2 chain (Al... 868 0.0
Alignment gi|XP_849904.1| PREDICTED: similar to Tubulin alpha-3 chain (Al... 867 0.0
Alignment gi|XP_534765.2| PREDICTED: similar to Tubulin alpha-3 chain (Al... 867 0.0
Alignment gi|XP_850665.1| PREDICTED: similar to Tubulin alpha-2 chain (Al... 866 0.0
Alignment gi|XP_853268.1| PREDICTED: similar to Tubulin alpha-2 chain (Al... 863 0.0
Alignment gi|XP_862332.1| PREDICTED: similar to tubulin, alpha 1 isoform ... 852 0.0
Alignment gi|XP_536077.2| PREDICTED: similar to Tubulin alpha-4 chain (Al... 852 0.0
>ref|XP_862547.1| PREDICTED: similar to tubulin, alpha 1 isoform 13 [Canis familiaris].
Length = 451
Score = 874 bits (2258), Expect = 0.0
Identities = 428/440 (97%), Positives = 428/440 (97%)
Frame = +3
Query: 105 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 284
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 285 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 464
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 120
Query: 465 RIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTA 644
RIRKLADQCTGLQGFLVFH LLMERLSVDYGKKSKLEFSIYPAPQVSTA
Sbjct: 121 RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 180
Query: 645 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 824
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
Sbjct: 181 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 240
Query: 825 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 1004
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 300
Query: 1005 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 1184
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
Sbjct: 301 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 360
Query: 1185 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 1364
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
Query: 1365 AREDMAALEKDYEEVGVDSV 1424
AREDMAALEKDYEEVGVDSV
Sbjct: 421 AREDMAALEKDYEEVGVDSV 440
>ref|XP_862523.1| PREDICTED: similar to tubulin, alpha 1 isoform 12 [Canis familiaris].
Length = 451
Score = 874 bits (2258), Expect = 0.0
Identities = 428/440 (97%), Positives = 428/440 (97%)
Frame = +3
Query: 105 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 284
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 285 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 464
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 120
Query: 465 RIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTA 644
RIRKLADQCTGLQGFLVFH LLMERLSVDYGKKSKLEFSIYPAPQVSTA
Sbjct: 121 RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 180
Query: 645 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 824
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
Sbjct: 181 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 240
Query: 825 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 1004
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 300
Query: 1005 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 1184
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
Sbjct: 301 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 360
Query: 1185 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 1364
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
Query: 1365 AREDMAALEKDYEEVGVDSV 1424
AREDMAALEKDYEEVGVDSV
Sbjct: 421 AREDMAALEKDYEEVGVDSV 440
>ref|XP_534814.1| PREDICTED: similar to tubulin, alpha 1 isoform 1 [Canis familiaris].
Length = 451
Score = 874 bits (2258), Expect = 0.0
Identities = 428/440 (97%), Positives = 428/440 (97%)
Frame = +3
Query: 105 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 284
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 285 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 464
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 120
Query: 465 RIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTA 644
RIRKLADQCTGLQGFLVFH LLMERLSVDYGKKSKLEFSIYPAPQVSTA
Sbjct: 121 RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 180
Query: 645 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 824
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
Sbjct: 181 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 240
Query: 825 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 1004
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 300
Query: 1005 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 1184
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
Sbjct: 301 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 360
Query: 1185 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 1364
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
Query: 1365 AREDMAALEKDYEEVGVDSV 1424
AREDMAALEKDYEEVGVDSV
Sbjct: 421 AREDMAALEKDYEEVGVDSV 440
>ref|XP_851095.1| PREDICTED: similar to Tubulin alpha-2 chain (Alpha-tubulin 2) [Canis
familiaris].
Length = 518
Score = 868 bits (2243), Expect = 0.0
Identities = 425/439 (96%), Positives = 426/439 (97%)
Frame = +3
Query: 108 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 287
RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH
Sbjct: 69 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 128
Query: 288 VPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDR 467
VPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDR
Sbjct: 129 VPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDR 188
Query: 468 IRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTAV 647
IRKLADQCTGLQGFLVFH LLMERLSVDYGKKSKLEFSIYPAPQVSTAV
Sbjct: 189 IRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAV 248
Query: 648 VEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITAS 827
VEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLI QIVSSITAS
Sbjct: 249 VEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITAS 308
Query: 828 LRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQ 1007
LRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQ
Sbjct: 309 LRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQ 368
Query: 1008 MVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPT 1187
MVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKR+IQFVDWCPTGFKVGINYQPPT
Sbjct: 369 MVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPT 428
Query: 1188 VVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEA 1367
VVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEA
Sbjct: 429 VVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEA 488
Query: 1368 REDMAALEKDYEEVGVDSV 1424
REDMAALEKDYEEVGVDSV
Sbjct: 489 REDMAALEKDYEEVGVDSV 507
>ref|XP_849904.1| PREDICTED: similar to Tubulin alpha-3 chain (Alpha-tubulin 3) isoform
1 [Canis familiaris].
Length = 450
Score = 867 bits (2240), Expect = 0.0
Identities = 421/440 (95%), Positives = 427/440 (97%)
Frame = +3
Query: 105 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 284
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 285 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 464
HVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI+DLVLD
Sbjct: 61 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 120
Query: 465 RIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTA 644
RIRKLAD CTGLQGFL+FH LLMERLSVDYGKKSKLEF+IYPAPQVSTA
Sbjct: 121 RIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTA 180
Query: 645 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 824
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
Sbjct: 181 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 240
Query: 825 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 1004
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 300
Query: 1005 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 1184
QMVKCDPRHGKYMACC+LYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
Sbjct: 301 QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 360
Query: 1185 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 1364
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
Query: 1365 AREDMAALEKDYEEVGVDSV 1424
ARED+AALEKDYEEVGVDSV
Sbjct: 421 AREDLAALEKDYEEVGVDSV 440
>ref|XP_534765.2| PREDICTED: similar to Tubulin alpha-3 chain (Alpha-tubulin 3) [Canis
familiaris].
Length = 450
Score = 867 bits (2239), Expect = 0.0
Identities = 420/440 (95%), Positives = 427/440 (97%)
Frame = +3
Query: 105 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 284
MRECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
Sbjct: 1 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 285 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 464
HVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI+DLVLD
Sbjct: 61 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 120
Query: 465 RIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTA 644
RIRKLAD CTGLQGFL+FH LLMERLSVDYGKKSKLEF+IYPAPQVSTA
Sbjct: 121 RIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTA 180
Query: 645 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 824
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
Sbjct: 181 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 240
Query: 825 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 1004
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 300
Query: 1005 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 1184
QMVKCDPRHGKYMACC+LYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
Sbjct: 301 QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 360
Query: 1185 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 1364
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
Query: 1365 AREDMAALEKDYEEVGVDSV 1424
ARED+AALEKDYEEVGVDSV
Sbjct: 421 AREDLAALEKDYEEVGVDSV 440
>ref|XP_850665.1| PREDICTED: similar to Tubulin alpha-2 chain (Alpha-tubulin 2) isoform
2 [Canis familiaris].
Length = 449
Score = 866 bits (2237), Expect = 0.0
Identities = 423/439 (96%), Positives = 425/439 (96%)
Frame = +3
Query: 105 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 284
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 285 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 464
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 120
Query: 465 RIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTA 644
RIRKLADQCTGLQGFLVFH LLMERLSVDYGKKSKLEFSIYPAPQVSTA
Sbjct: 121 RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 180
Query: 645 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 824
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLI QIVSSITA
Sbjct: 181 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA 240
Query: 825 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 1004
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQL+VAEITNACFEPAN
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNACFEPAN 300
Query: 1005 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 1184
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKR+IQFVDWCPTGFKVGINYQPP
Sbjct: 301 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPP 360
Query: 1185 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 1364
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
Query: 1365 AREDMAALEKDYEEVGVDS 1421
AREDMAALEKDYEEVG DS
Sbjct: 421 AREDMAALEKDYEEVGADS 439
>ref|XP_853268.1| PREDICTED: similar to Tubulin alpha-2 chain (Alpha-tubulin 2) [Canis
familiaris].
Length = 460
Score = 863 bits (2231), Expect = 0.0
Identities = 420/439 (95%), Positives = 425/439 (96%)
Frame = +3
Query: 108 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 287
RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH
Sbjct: 11 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 70
Query: 288 VPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDR 467
VPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKE+IDLVLDR
Sbjct: 71 VPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKELIDLVLDR 130
Query: 468 IRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTAV 647
IRKLADQCTGLQGFL+FH LLMERLSVDYGKKSKLEFSIYPAPQVSTAV
Sbjct: 131 IRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAV 190
Query: 648 VEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITAS 827
VEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLI QIVSSITAS
Sbjct: 191 VEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITAS 250
Query: 828 LRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQ 1007
LRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQ
Sbjct: 251 LRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQ 310
Query: 1008 MVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPT 1187
MVKCDPRHGKYMACCLLYRGDVVPKDVNAAIA IKTKR+IQFVDWCPTGFKVGINYQPPT
Sbjct: 311 MVKCDPRHGKYMACCLLYRGDVVPKDVNAAIAAIKTKRSIQFVDWCPTGFKVGINYQPPT 370
Query: 1188 VVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEA 1367
VVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEA
Sbjct: 371 VVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEA 430
Query: 1368 REDMAALEKDYEEVGVDSV 1424
REDMAALEKDYEEVG+DSV
Sbjct: 431 REDMAALEKDYEEVGMDSV 449
>ref|XP_862332.1| PREDICTED: similar to tubulin, alpha 1 isoform 5 [Canis familiaris].
Length = 443
Score = 852 bits (2202), Expect = 0.0
Identities = 420/440 (95%), Positives = 420/440 (95%)
Frame = +3
Query: 105 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 284
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 285 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 464
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDL
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDL--- 117
Query: 465 RIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTA 644
ADQCTGLQGFLVFH LLMERLSVDYGKKSKLEFSIYPAPQVSTA
Sbjct: 118 -----ADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 172
Query: 645 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 824
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
Sbjct: 173 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 232
Query: 825 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 1004
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
Sbjct: 233 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 292
Query: 1005 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 1184
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
Sbjct: 293 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 352
Query: 1185 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 1364
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 353 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 412
Query: 1365 AREDMAALEKDYEEVGVDSV 1424
AREDMAALEKDYEEVGVDSV
Sbjct: 413 AREDMAALEKDYEEVGVDSV 432
>ref|XP_536077.2| PREDICTED: similar to Tubulin alpha-4 chain (Alpha-tubulin 4)
(Alpha-tubulin isotype M-alpha-4) isoform 1 [Canis
familiaris].
Length = 448
Score = 852 bits (2201), Expect = 0.0
Identities = 414/439 (94%), Positives = 420/439 (95%)
Frame = +3
Query: 105 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 284
MRECIS+HVGQAGVQ+GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSF TFF ETGAGK
Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFTTFFCETGAGK 60
Query: 285 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 464
HVPRAVFVDLEPTVIDE+R G YRQLFHPEQLITGKEDAANNYARGHYTIGKEIID VLD
Sbjct: 61 HVPRAVFVDLEPTVIDEIRNGPYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDPVLD 120
Query: 465 RIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTA 644
RIRKL+DQCTGLQGFLVFH LLMERLSVDYGKKSKLEFSIYPAPQVSTA
Sbjct: 121 RIRKLSDQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 180
Query: 645 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 824
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLI QIVSSITA
Sbjct: 181 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA 240
Query: 825 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 1004
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 300
Query: 1005 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 1184
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIA IKTKR+IQFVDWCPTGFKVGINYQPP
Sbjct: 301 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIAAIKTKRSIQFVDWCPTGFKVGINYQPP 360
Query: 1185 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 1364
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
Query: 1365 AREDMAALEKDYEEVGVDS 1421
AREDMAALEKDYEEVG+DS
Sbjct: 421 AREDMAALEKDYEEVGIDS 439
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 64,846,196
Number of extensions: 1844895
Number of successful extensions: 7746
Number of sequences better than 1.0e-05: 110
Number of HSP's gapped: 7591
Number of HSP's successfully gapped: 137
Length of query: 531
Length of database: 18,874,504
Length adjustment: 108
Effective length of query: 423
Effective length of database: 15,274,216
Effective search space: 6460993368
Effective search space used: 6460993368
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-000464
(1593 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_006000.2| tubulin alpha-1A chain [Homo sapiens]. 874 0.0
Alignment gi|NP_006073.2| tubulin alpha-1B chain [Homo sapiens]. 870 0.0
Alignment gi|NP_525125.2| tubulin alpha-3C/D chain [Homo sapiens]. 867 0.0
Alignment gi|NP_116093.1| tubulin alpha-1C chain [Homo sapiens]. 867 0.0
Alignment gi|NP_005992.1| tubulin alpha-3C/D chain [Homo sapiens]. 867 0.0
Alignment gi|NP_997195.1| tubulin alpha-3E chain [Homo sapiens]. 853 0.0
Alignment gi|NP_005991.1| tubulin alpha-4A chain [Homo sapiens]. 852 0.0
Alignment gi|NP_061816.1| tubulin alpha-8 chain isoform 1 [Homo sapiens]. 802 0.0
Alignment gi|NP_001180343.1| tubulin alpha-8 chain isoform 2 [Homo sapien... 697 0.0
Alignment gi|NP_079079.1| tubulin alpha chain-like 3 isoform 1 [Homo sapi... 677 0.0
>ref|NP_006000.2| tubulin alpha-1A chain [Homo sapiens].
Length = 451
Score = 874 bits (2258), Expect = 0.0
Identities = 428/440 (97%), Positives = 428/440 (97%)
Frame = +3
Query: 105 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 284
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 285 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 464
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 120
Query: 465 RIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTA 644
RIRKLADQCTGLQGFLVFH LLMERLSVDYGKKSKLEFSIYPAPQVSTA
Sbjct: 121 RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 180
Query: 645 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 824
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
Sbjct: 181 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 240
Query: 825 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 1004
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 300
Query: 1005 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 1184
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
Sbjct: 301 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 360
Query: 1185 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 1364
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
Query: 1365 AREDMAALEKDYEEVGVDSV 1424
AREDMAALEKDYEEVGVDSV
Sbjct: 421 AREDMAALEKDYEEVGVDSV 440
>ref|NP_006073.2| tubulin alpha-1B chain [Homo sapiens].
Length = 451
Score = 870 bits (2248), Expect = 0.0
Identities = 426/440 (96%), Positives = 427/440 (97%)
Frame = +3
Query: 105 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 284
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 285 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 464
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 120
Query: 465 RIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTA 644
RIRKLADQCTGLQGFLVFH LLMERLSVDYGKKSKLEFSIYPAPQVSTA
Sbjct: 121 RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 180
Query: 645 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 824
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLI QIVSSITA
Sbjct: 181 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA 240
Query: 825 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 1004
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 300
Query: 1005 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 1184
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKR+IQFVDWCPTGFKVGINYQPP
Sbjct: 301 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPP 360
Query: 1185 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 1364
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
Query: 1365 AREDMAALEKDYEEVGVDSV 1424
AREDMAALEKDYEEVGVDSV
Sbjct: 421 AREDMAALEKDYEEVGVDSV 440
>ref|NP_525125.2| tubulin alpha-3C/D chain [Homo sapiens].
Length = 450
Score = 867 bits (2240), Expect = 0.0
Identities = 421/440 (95%), Positives = 427/440 (97%)
Frame = +3
Query: 105 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 284
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 285 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 464
HVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI+DLVLD
Sbjct: 61 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 120
Query: 465 RIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTA 644
RIRKLAD CTGLQGFL+FH LLMERLSVDYGKKSKLEF+IYPAPQVSTA
Sbjct: 121 RIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTA 180
Query: 645 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 824
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
Sbjct: 181 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 240
Query: 825 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 1004
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 300
Query: 1005 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 1184
QMVKCDPRHGKYMACC+LYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
Sbjct: 301 QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 360
Query: 1185 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 1364
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
Query: 1365 AREDMAALEKDYEEVGVDSV 1424
ARED+AALEKDYEEVGVDSV
Sbjct: 421 AREDLAALEKDYEEVGVDSV 440
>ref|NP_116093.1| tubulin alpha-1C chain [Homo sapiens].
Length = 449
Score = 867 bits (2240), Expect = 0.0
Identities = 423/439 (96%), Positives = 425/439 (96%)
Frame = +3
Query: 105 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 284
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 285 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 464
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 120
Query: 465 RIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTA 644
RIRKLADQCTGLQGFLVFH LLMERLSVDYGKKSKLEFSIYPAPQVSTA
Sbjct: 121 RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 180
Query: 645 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 824
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLI QIVSSITA
Sbjct: 181 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA 240
Query: 825 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 1004
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQL+VAEITNACFEPAN
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNACFEPAN 300
Query: 1005 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 1184
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
Sbjct: 301 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 360
Query: 1185 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 1364
TVVPGGDLAKVQRAVCMLSNTTA+AEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361 TVVPGGDLAKVQRAVCMLSNTTAVAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
Query: 1365 AREDMAALEKDYEEVGVDS 1421
AREDMAALEKDYEEVG DS
Sbjct: 421 AREDMAALEKDYEEVGADS 439
>ref|NP_005992.1| tubulin alpha-3C/D chain [Homo sapiens].
Length = 450
Score = 867 bits (2240), Expect = 0.0
Identities = 421/440 (95%), Positives = 427/440 (97%)
Frame = +3
Query: 105 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 284
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 285 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 464
HVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI+DLVLD
Sbjct: 61 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 120
Query: 465 RIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTA 644
RIRKLAD CTGLQGFL+FH LLMERLSVDYGKKSKLEF+IYPAPQVSTA
Sbjct: 121 RIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTA 180
Query: 645 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 824
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
Sbjct: 181 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 240
Query: 825 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 1004
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 300
Query: 1005 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 1184
QMVKCDPRHGKYMACC+LYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
Sbjct: 301 QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 360
Query: 1185 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 1364
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
Query: 1365 AREDMAALEKDYEEVGVDSV 1424
ARED+AALEKDYEEVGVDSV
Sbjct: 421 AREDLAALEKDYEEVGVDSV 440
>ref|NP_997195.1| tubulin alpha-3E chain [Homo sapiens].
Length = 450
Score = 853 bits (2203), Expect = 0.0
Identities = 416/440 (94%), Positives = 423/440 (96%)
Frame = +3
Query: 105 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 284
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 285 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 464
HVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLITGKEDAA+NYARGHYTIGKEI+DLVLD
Sbjct: 61 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAASNYARGHYTIGKEIVDLVLD 120
Query: 465 RIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTA 644
RIRKLAD CTGLQGFL+FH LLMERLSVDY KKSKLEF+IYPAPQVSTA
Sbjct: 121 RIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYSKKSKLEFAIYPAPQVSTA 180
Query: 645 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 824
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
Sbjct: 181 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 240
Query: 825 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 1004
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 300
Query: 1005 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 1184
QMVKCDPRHGKYMACC+LYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
Sbjct: 301 QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 360
Query: 1185 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 1364
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARL HKFDLMYAK AFVHWYVGEGMEEGEFSE
Sbjct: 361 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLVHKFDLMYAKWAFVHWYVGEGMEEGEFSE 420
Query: 1365 AREDMAALEKDYEEVGVDSV 1424
ARED+AALEKD EEVGVDSV
Sbjct: 421 AREDLAALEKDCEEVGVDSV 440
>ref|NP_005991.1| tubulin alpha-4A chain [Homo sapiens].
Length = 448
Score = 852 bits (2201), Expect = 0.0
Identities = 414/439 (94%), Positives = 420/439 (95%)
Frame = +3
Query: 105 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 284
MRECIS+HVGQAGVQ+GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSF TFF ETGAGK
Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFTTFFCETGAGK 60
Query: 285 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 464
HVPRAVFVDLEPTVIDE+R G YRQLFHPEQLITGKEDAANNYARGHYTIGKEIID VLD
Sbjct: 61 HVPRAVFVDLEPTVIDEIRNGPYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDPVLD 120
Query: 465 RIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTA 644
RIRKL+DQCTGLQGFLVFH LLMERLSVDYGKKSKLEFSIYPAPQVSTA
Sbjct: 121 RIRKLSDQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 180
Query: 645 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 824
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLI QIVSSITA
Sbjct: 181 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA 240
Query: 825 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 1004
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 300
Query: 1005 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 1184
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIA IKTKR+IQFVDWCPTGFKVGINYQPP
Sbjct: 301 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIAAIKTKRSIQFVDWCPTGFKVGINYQPP 360
Query: 1185 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 1364
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
Query: 1365 AREDMAALEKDYEEVGVDS 1421
AREDMAALEKDYEEVG+DS
Sbjct: 421 AREDMAALEKDYEEVGIDS 439
>ref|NP_061816.1| tubulin alpha-8 chain isoform 1 [Homo sapiens].
Length = 449
Score = 802 bits (2072), Expect = 0.0
Identities = 387/439 (88%), Positives = 404/439 (92%)
Frame = +3
Query: 105 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 284
MRECIS+HVGQAGVQIGNACWEL+CLEHGIQ DG + + DDSF TFFSETG GK
Sbjct: 1 MRECISVHVGQAGVQIGNACWELFCLEHGIQADGTFDAQASKINDDDSFTTFFSETGNGK 60
Query: 285 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 464
HVPRAV +DLEPTV+DEVR GTYRQLFHPEQLITGKEDAANNYARGHYT+GKE IDLVLD
Sbjct: 61 HVPRAVMIDLEPTVVDEVRAGTYRQLFHPEQLITGKEDAANNYARGHYTVGKESIDLVLD 120
Query: 465 RIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTA 644
RIRKL D C+GLQGFL+FH LLMERLS+DYGKKSKLEF+IYPAPQVSTA
Sbjct: 121 RIRKLTDACSGLQGFLIFHSFGGGTGSGFTSLLMERLSLDYGKKSKLEFAIYPAPQVSTA 180
Query: 645 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 824
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLI QIVSSITA
Sbjct: 181 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA 240
Query: 825 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 1004
SLRFDGALNVDLTEFQTNLVPYPRIHFPL TYAP+ISAEKAYHEQLSVAEIT++CFEP +
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPIISAEKAYHEQLSVAEITSSCFEPNS 300
Query: 1005 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 1184
QMVKCDPRHGKYMACC+LYRGDVVPKDVN AIA IKTKRTIQFVDWCPTGFKVGINYQPP
Sbjct: 301 QMVKCDPRHGKYMACCMLYRGDVVPKDVNVAIAAIKTKRTIQFVDWCPTGFKVGINYQPP 360
Query: 1185 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 1364
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
Query: 1365 AREDMAALEKDYEEVGVDS 1421
ARED+AALEKDYEEVG DS
Sbjct: 421 AREDLAALEKDYEEVGTDS 439
>ref|NP_001180343.1| tubulin alpha-8 chain isoform 2 [Homo sapiens].
Length = 383
Score = 697 bits (1800), Expect = 0.0
Identities = 337/372 (90%), Positives = 350/372 (94%)
Frame = +3
Query: 306 VDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLAD 485
+DLEPTV+DEVR GTYRQLFHPEQLITGKEDAANNYARGHYT+GKE IDLVLDRIRKL D
Sbjct: 2 IDLEPTVVDEVRAGTYRQLFHPEQLITGKEDAANNYARGHYTVGKESIDLVLDRIRKLTD 61
Query: 486 QCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNS 665
C+GLQGFL+FH LLMERLS+DYGKKSKLEF+IYPAPQVSTAVVEPYNS
Sbjct: 62 ACSGLQGFLIFHSFGGGTGSGFTSLLMERLSLDYGKKSKLEFAIYPAPQVSTAVVEPYNS 121
Query: 666 ILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGA 845
ILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLI QIVSSITASLRFDGA
Sbjct: 122 ILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGA 181
Query: 846 LNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDP 1025
LNVDLTEFQTNLVPYPRIHFPL TYAP+ISAEKAYHEQLSVAEIT++CFEP +QMVKCDP
Sbjct: 182 LNVDLTEFQTNLVPYPRIHFPLVTYAPIISAEKAYHEQLSVAEITSSCFEPNSQMVKCDP 241
Query: 1026 RHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGD 1205
RHGKYMACC+LYRGDVVPKDVN AIA IKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGD
Sbjct: 242 RHGKYMACCMLYRGDVVPKDVNVAIAAIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGD 301
Query: 1206 LAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAA 1385
LAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEARED+AA
Sbjct: 302 LAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA 361
Query: 1386 LEKDYEEVGVDS 1421
LEKDYEEVG DS
Sbjct: 362 LEKDYEEVGTDS 373
>ref|NP_079079.1| tubulin alpha chain-like 3 isoform 1 [Homo sapiens].
Length = 446
Score = 677 bits (1746), Expect = 0.0
Identities = 317/443 (71%), Positives = 379/443 (85%), Gaps = 8/443 (1%)
Frame = +3
Query: 105 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDG--------QMPSDKTIGGGDDSFNTF 260
MREC+SIH+GQAG+QIG+ACWELYCLEHGIQP+G Q+ + K + + SF+TF
Sbjct: 1 MRECLSIHIGQAGIQIGDACWELYCLEHGIQPNGVVLDTQQDQLENAK-MEHTNASFDTF 59
Query: 261 FSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGK 440
F ET AGKHVPRA+FVDLEPTVID +RTG +R LFHPEQL++GKEDAANNYARG Y++G
Sbjct: 60 FCETRAGKHVPRALFVDLEPTVIDGIRTGQHRSLFHPEQLLSGKEDAANNYARGRYSVGS 119
Query: 441 EIIDLVLDRIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIY 620
E+IDLVL+R RKLA+QC GLQGFL+F LLMERL+ +Y +K+KLEFS+Y
Sbjct: 120 EVIDLVLERTRKLAEQCGGLQGFLIFRSFGGGTGSGFTSLLMERLTGEYSRKTKLEFSVY 179
Query: 621 PAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIG 800
PAP++STAVVEPYNS+LTTH+T EH+DC FMVDNEA+YDIC R L +E P++ ++NRL+
Sbjct: 180 PAPRISTAVVEPYNSVLTTHSTTEHTDCTFMVDNEAVYDICHRKLGVECPSHASINRLVV 239
Query: 801 QIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEIT 980
Q+VSSITASLRF+G LNVDL EFQTNLVPYPRIHFP+ +AP++SA+KAYHEQ SV++IT
Sbjct: 240 QVVSSITASLRFEGPLNVDLIEFQTNLVPYPRIHFPMTAFAPIVSADKAYHEQFSVSDIT 299
Query: 981 NACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFK 1160
ACFE +NQ+VKCDPR GKYMACCLLYRGDVVPK+VNAAIA K++ ++QFVDWCPTGFK
Sbjct: 300 TACFESSNQLVKCDPRLGKYMACCLLYRGDVVPKEVNAAIAATKSRHSVQFVDWCPTGFK 359
Query: 1161 VGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEG 1340
VGIN +PPTV+PGGDLAKV R++CMLSNTTAI EAWARLDHKFDLMYAKRAF+HWY+ EG
Sbjct: 360 VGINNRPPTVMPGGDLAKVHRSICMLSNTTAIVEAWARLDHKFDLMYAKRAFLHWYLREG 419
Query: 1341 MEEGEFSEAREDMAALEKDYEEV 1409
MEE EF EARED+AALE+DYEEV
Sbjct: 420 MEEAEFLEAREDLAALERDYEEV 442
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 63,790,536
Number of extensions: 1823333
Number of successful extensions: 7285
Number of sequences better than 1.0e-05: 29
Number of HSP's gapped: 7151
Number of HSP's successfully gapped: 30
Length of query: 531
Length of database: 18,297,164
Length adjustment: 107
Effective length of query: 424
Effective length of database: 14,770,016
Effective search space: 6262486784
Effective search space used: 6262486784
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-000464
(1593 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_035783.1| tubulin alpha-1A chain [Mus musculus]. 874 0.0
Alignment gi|NP_035784.1| tubulin alpha-1B chain [Mus musculus]. 870 0.0
Alignment gi|NP_033474.1| tubulin alpha-1C chain [Mus musculus]. 867 0.0
Alignment gi|NP_033475.1| tubulin alpha-3 chain [Mus musculus]. 867 0.0
Alignment gi|NP_033472.1| tubulin alpha-3 chain [Mus musculus]. 867 0.0
Alignment gi|NP_033473.1| tubulin alpha-4A chain [Mus musculus]. 852 0.0
Alignment gi|XP_486246.1| PREDICTED: tubulin alpha-1B chain isoform 1 [Mu... 841 0.0
Alignment gi|XP_909750.1| PREDICTED: tubulin alpha-1B chain isoform 4 [Mu... 841 0.0
Alignment gi|NP_059075.1| tubulin alpha-8 chain [Mus musculus]. 802 0.0
Alignment gi|NP_001029051.2| tubulin alpha chain-like 3 [Mus musculus]. 679 0.0
>ref|NP_035783.1| tubulin alpha-1A chain [Mus musculus].
Length = 451
Score = 874 bits (2258), Expect = 0.0
Identities = 428/440 (97%), Positives = 428/440 (97%)
Frame = +3
Query: 105 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 284
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 285 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 464
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 120
Query: 465 RIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTA 644
RIRKLADQCTGLQGFLVFH LLMERLSVDYGKKSKLEFSIYPAPQVSTA
Sbjct: 121 RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 180
Query: 645 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 824
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
Sbjct: 181 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 240
Query: 825 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 1004
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 300
Query: 1005 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 1184
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
Sbjct: 301 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 360
Query: 1185 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 1364
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
Query: 1365 AREDMAALEKDYEEVGVDSV 1424
AREDMAALEKDYEEVGVDSV
Sbjct: 421 AREDMAALEKDYEEVGVDSV 440
>ref|NP_035784.1| tubulin alpha-1B chain [Mus musculus].
Length = 451
Score = 870 bits (2248), Expect = 0.0
Identities = 426/440 (96%), Positives = 427/440 (97%)
Frame = +3
Query: 105 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 284
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 285 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 464
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 120
Query: 465 RIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTA 644
RIRKLADQCTGLQGFLVFH LLMERLSVDYGKKSKLEFSIYPAPQVSTA
Sbjct: 121 RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 180
Query: 645 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 824
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLI QIVSSITA
Sbjct: 181 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA 240
Query: 825 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 1004
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 300
Query: 1005 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 1184
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKR+IQFVDWCPTGFKVGINYQPP
Sbjct: 301 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPP 360
Query: 1185 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 1364
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
Query: 1365 AREDMAALEKDYEEVGVDSV 1424
AREDMAALEKDYEEVGVDSV
Sbjct: 421 AREDMAALEKDYEEVGVDSV 440
>ref|NP_033474.1| tubulin alpha-1C chain [Mus musculus].
Length = 449
Score = 867 bits (2241), Expect = 0.0
Identities = 424/439 (96%), Positives = 425/439 (96%)
Frame = +3
Query: 105 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 284
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 285 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 464
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 120
Query: 465 RIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTA 644
RIRKLADQCTGLQGFLVFH LLMERLSVDYGKKSKLEFSIYPAPQVSTA
Sbjct: 121 RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 180
Query: 645 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 824
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLI QIVSSITA
Sbjct: 181 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA 240
Query: 825 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 1004
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQL+VAEITNACFEPAN
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNACFEPAN 300
Query: 1005 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 1184
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
Sbjct: 301 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 360
Query: 1185 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 1364
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
Query: 1365 AREDMAALEKDYEEVGVDS 1421
AREDMAALEKDYEEVG DS
Sbjct: 421 AREDMAALEKDYEEVGADS 439
>ref|NP_033475.1| tubulin alpha-3 chain [Mus musculus].
Length = 450
Score = 867 bits (2240), Expect = 0.0
Identities = 421/440 (95%), Positives = 427/440 (97%)
Frame = +3
Query: 105 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 284
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 285 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 464
HVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI+DLVLD
Sbjct: 61 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 120
Query: 465 RIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTA 644
RIRKLAD CTGLQGFL+FH LLMERLSVDYGKKSKLEF+IYPAPQVSTA
Sbjct: 121 RIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTA 180
Query: 645 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 824
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
Sbjct: 181 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 240
Query: 825 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 1004
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 300
Query: 1005 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 1184
QMVKCDPRHGKYMACC+LYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
Sbjct: 301 QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 360
Query: 1185 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 1364
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
Query: 1365 AREDMAALEKDYEEVGVDSV 1424
ARED+AALEKDYEEVGVDSV
Sbjct: 421 AREDLAALEKDYEEVGVDSV 440
>ref|NP_033472.1| tubulin alpha-3 chain [Mus musculus].
Length = 450
Score = 867 bits (2240), Expect = 0.0
Identities = 421/440 (95%), Positives = 427/440 (97%)
Frame = +3
Query: 105 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 284
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 285 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 464
HVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI+DLVLD
Sbjct: 61 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 120
Query: 465 RIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTA 644
RIRKLAD CTGLQGFL+FH LLMERLSVDYGKKSKLEF+IYPAPQVSTA
Sbjct: 121 RIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTA 180
Query: 645 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 824
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
Sbjct: 181 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 240
Query: 825 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 1004
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 300
Query: 1005 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 1184
QMVKCDPRHGKYMACC+LYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
Sbjct: 301 QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 360
Query: 1185 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 1364
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
Query: 1365 AREDMAALEKDYEEVGVDSV 1424
ARED+AALEKDYEEVGVDSV
Sbjct: 421 AREDLAALEKDYEEVGVDSV 440
>ref|NP_033473.1| tubulin alpha-4A chain [Mus musculus].
Length = 448
Score = 852 bits (2201), Expect = 0.0
Identities = 414/439 (94%), Positives = 420/439 (95%)
Frame = +3
Query: 105 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 284
MRECIS+HVGQAGVQ+GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSF TFF ETGAGK
Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFTTFFCETGAGK 60
Query: 285 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 464
HVPRAVFVDLEPTVIDE+R G YRQLFHPEQLITGKEDAANNYARGHYTIGKEIID VLD
Sbjct: 61 HVPRAVFVDLEPTVIDEIRNGPYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDPVLD 120
Query: 465 RIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTA 644
RIRKL+DQCTGLQGFLVFH LLMERLSVDYGKKSKLEFSIYPAPQVSTA
Sbjct: 121 RIRKLSDQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 180
Query: 645 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 824
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLI QIVSSITA
Sbjct: 181 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA 240
Query: 825 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 1004
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 300
Query: 1005 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 1184
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIA IKTKR+IQFVDWCPTGFKVGINYQPP
Sbjct: 301 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIAAIKTKRSIQFVDWCPTGFKVGINYQPP 360
Query: 1185 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 1364
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
Query: 1365 AREDMAALEKDYEEVGVDS 1421
AREDMAALEKDYEEVG+DS
Sbjct: 421 AREDMAALEKDYEEVGIDS 439
>ref|XP_486246.1| PREDICTED: tubulin alpha-1B chain isoform 1 [Mus musculus].
Length = 450
Score = 841 bits (2172), Expect = 0.0
Identities = 415/440 (94%), Positives = 418/440 (95%)
Frame = +3
Query: 105 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 284
MRECISIHVGQAGVQIGNACWELYCLEHGIQ DGQMPS KTI GGDDSFNTF SETGAGK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQADGQMPSGKTIRGGDDSFNTF-SETGAGK 59
Query: 285 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 464
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
Sbjct: 60 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 119
Query: 465 RIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTA 644
IRKLADQC GLQGFLVFH LLMERLSVDYGKKSKLEFSIYPAPQVSTA
Sbjct: 120 TIRKLADQCIGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 179
Query: 645 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 824
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIE PTYTNLNRLI QIVSSITA
Sbjct: 180 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIEHPTYTNLNRLISQIVSSITA 239
Query: 825 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 1004
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHE LSVAEITNACFEPAN
Sbjct: 240 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEHLSVAEITNACFEPAN 299
Query: 1005 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 1184
QMVKCDPRHGKYMACCLLYRGDV+PKDVNAAIATIKTKR+IQFVDWCPTGFKVGINYQPP
Sbjct: 300 QMVKCDPRHGKYMACCLLYRGDVIPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPP 359
Query: 1185 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 1364
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFV+WYVGE MEEGEFSE
Sbjct: 360 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVYWYVGESMEEGEFSE 419
Query: 1365 AREDMAALEKDYEEVGVDSV 1424
AREDMAALEKDYEEVGVDSV
Sbjct: 420 AREDMAALEKDYEEVGVDSV 439
>ref|XP_909750.1| PREDICTED: tubulin alpha-1B chain isoform 4 [Mus musculus].
Length = 450
Score = 841 bits (2172), Expect = 0.0
Identities = 415/440 (94%), Positives = 418/440 (95%)
Frame = +3
Query: 105 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 284
MRECISIHVGQAGVQIGNACWELYCLEHGIQ DGQMPS KTI GGDDSFNTF SETGAGK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQADGQMPSGKTIRGGDDSFNTF-SETGAGK 59
Query: 285 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 464
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
Sbjct: 60 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 119
Query: 465 RIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTA 644
IRKLADQC GLQGFLVFH LLMERLSVDYGKKSKLEFSIYPAPQVSTA
Sbjct: 120 TIRKLADQCIGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 179
Query: 645 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 824
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIE PTYTNLNRLI QIVSSITA
Sbjct: 180 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIEHPTYTNLNRLISQIVSSITA 239
Query: 825 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 1004
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHE LSVAEITNACFEPAN
Sbjct: 240 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEHLSVAEITNACFEPAN 299
Query: 1005 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 1184
QMVKCDPRHGKYMACCLLYRGDV+PKDVNAAIATIKTKR+IQFVDWCPTGFKVGINYQPP
Sbjct: 300 QMVKCDPRHGKYMACCLLYRGDVIPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPP 359
Query: 1185 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 1364
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFV+WYVGE MEEGEFSE
Sbjct: 360 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVYWYVGESMEEGEFSE 419
Query: 1365 AREDMAALEKDYEEVGVDSV 1424
AREDMAALEKDYEEVGVDSV
Sbjct: 420 AREDMAALEKDYEEVGVDSV 439
>ref|NP_059075.1| tubulin alpha-8 chain [Mus musculus].
Length = 449
Score = 802 bits (2072), Expect = 0.0
Identities = 388/439 (88%), Positives = 404/439 (92%)
Frame = +3
Query: 105 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 284
MRECIS+HVGQAGVQIGNACWEL+CLEHGIQ DG + + DDSF TFFSETG GK
Sbjct: 1 MRECISVHVGQAGVQIGNACWELFCLEHGIQADGTFGTQASKINDDDSFTTFFSETGNGK 60
Query: 285 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 464
HVPRAV VDLEPTV+DEVR GTYRQLFHPEQLITGKEDAANNYARGHYT+GKE IDLVLD
Sbjct: 61 HVPRAVMVDLEPTVVDEVRAGTYRQLFHPEQLITGKEDAANNYARGHYTVGKESIDLVLD 120
Query: 465 RIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTA 644
RIRKL D C+GLQGFL+FH LLMERLS+DYGKKSKLEF+IYPAPQVSTA
Sbjct: 121 RIRKLTDACSGLQGFLIFHSFGGGTGSGFTSLLMERLSLDYGKKSKLEFAIYPAPQVSTA 180
Query: 645 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 824
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLI QIVSSITA
Sbjct: 181 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA 240
Query: 825 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 1004
SLRFDGALNVDLTEFQTNLVPYPRIHFPL TYAP+ISAEKAYHEQLSVAEIT++CFEP +
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPIISAEKAYHEQLSVAEITSSCFEPNS 300
Query: 1005 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 1184
QMVKCDPRHGKYMACC+LYRGDVVPKDVN AIA IKTKRTIQFVDWCPTGFKVGINYQPP
Sbjct: 301 QMVKCDPRHGKYMACCMLYRGDVVPKDVNVAIAAIKTKRTIQFVDWCPTGFKVGINYQPP 360
Query: 1185 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 1364
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
Query: 1365 AREDMAALEKDYEEVGVDS 1421
ARED+AALEKDYEEVG DS
Sbjct: 421 AREDLAALEKDYEEVGTDS 439
>ref|NP_001029051.2| tubulin alpha chain-like 3 [Mus musculus].
Length = 446
Score = 679 bits (1753), Expect = 0.0
Identities = 321/444 (72%), Positives = 377/444 (84%), Gaps = 7/444 (1%)
Frame = +3
Query: 105 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDK-------TIGGGDDSFNTFF 263
MREC+SIH+GQAGVQIG+ACWELYCLEHGIQPDG + + + + S +TFF
Sbjct: 1 MRECLSIHIGQAGVQIGDACWELYCLEHGIQPDGFILDHQHDNLENPKVEHMNASLDTFF 60
Query: 264 SETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKE 443
ET AGKHVPR +F+DLEPTVID +R G Y LFHPEQL+ GKEDAAN YARG Y++G E
Sbjct: 61 HETRAGKHVPRTLFMDLEPTVIDGIRVGRYHSLFHPEQLVNGKEDAANTYARGRYSVGSE 120
Query: 444 IIDLVLDRIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYP 623
+I+LVL+RIRKLA+QC+GLQGFL++ LLMERLSV+Y KK KLEFS+YP
Sbjct: 121 VIELVLERIRKLAEQCSGLQGFLIYRSFGGGTGSGFTSLLMERLSVEYCKKIKLEFSVYP 180
Query: 624 APQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQ 803
+P++STAVVEPYN+ILTTH+T+E+SDCAFMVDNEA+YDIC+ L IERP+Y ++NRLI Q
Sbjct: 181 SPRISTAVVEPYNAILTTHSTIEYSDCAFMVDNEALYDICQHKLGIERPSYASINRLIAQ 240
Query: 804 IVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITN 983
+ SSITASLRF+G LNVDL EFQTNLVPYPRIHFP+ AP+ISAEKAY EQLSV+++T
Sbjct: 241 VSSSITASLRFEGPLNVDLIEFQTNLVPYPRIHFPITALAPIISAEKAYQEQLSVSDVTA 300
Query: 984 ACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKV 1163
+CFE +NQ+VKCDPR GKYMACCLLYRGDVVPKDVN AIA +K++ ++QFVDWCPTGFKV
Sbjct: 301 SCFEVSNQLVKCDPRLGKYMACCLLYRGDVVPKDVNEAIAAMKSRTSVQFVDWCPTGFKV 360
Query: 1164 GINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGM 1343
GINYQPP VVPGGDLA+VQRAVCMLSNTTAI EAWARLDHKFDLMYAK+AF+HWY+ EGM
Sbjct: 361 GINYQPPAVVPGGDLARVQRAVCMLSNTTAIVEAWARLDHKFDLMYAKKAFLHWYITEGM 420
Query: 1344 EEGEFSEAREDMAALEKDYEEVGV 1415
E GEF EARED+AALEKDYEEVG+
Sbjct: 421 ELGEFVEAREDLAALEKDYEEVGL 444
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 54,027,395
Number of extensions: 1522233
Number of successful extensions: 6180
Number of sequences better than 1.0e-05: 28
Number of HSP's gapped: 6028
Number of HSP's successfully gapped: 28
Length of query: 531
Length of database: 15,617,559
Length adjustment: 106
Effective length of query: 425
Effective length of database: 12,433,743
Effective search space: 5284340775
Effective search space used: 5284340775
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-000464
(1593 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001038009.1| tubulin alpha-1B chain [Sus scrofa]. 870 0.0
Alignment gi|XP_001929621.1| PREDICTED: tubulin alpha-3 chain [Sus scrofa]. 867 0.0
Alignment gi|XP_003133048.1| PREDICTED: tubulin alpha-3 chain-like [Sus s... 867 0.0
Alignment gi|XP_001928233.1| PREDICTED: tubulin alpha-1D chain [Sus scrof... 865 0.0
Alignment gi|XP_003355423.1| PREDICTED: tubulin alpha-1C chain isoform 1 ... 865 0.0
Alignment gi|XP_001928370.3| PREDICTED: tubulin alpha-4A chain [Sus scrof... 852 0.0
Alignment gi|XP_003355425.1| PREDICTED: tubulin alpha-1C chain isoform 3 ... 788 0.0
Alignment gi|XP_003355424.1| PREDICTED: tubulin alpha-1C chain isoform 2 ... 788 0.0
Alignment gi|XP_003361673.1| PREDICTED: tubulin alpha-8 chain-like [Sus s... 691 0.0
Alignment gi|XP_003357831.1| PREDICTED: tubulin alpha chain-like 3-like [... 669 0.0
>ref|NP_001038009.1| tubulin alpha-1B chain [Sus scrofa].
Length = 451
Score = 870 bits (2248), Expect = 0.0
Identities = 426/440 (96%), Positives = 427/440 (97%)
Frame = +3
Query: 105 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 284
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 285 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 464
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 120
Query: 465 RIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTA 644
RIRKLADQCTGLQGFLVFH LLMERLSVDYGKKSKLEFSIYPAPQVSTA
Sbjct: 121 RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 180
Query: 645 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 824
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLI QIVSSITA
Sbjct: 181 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA 240
Query: 825 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 1004
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 300
Query: 1005 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 1184
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKR+IQFVDWCPTGFKVGINYQPP
Sbjct: 301 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPP 360
Query: 1185 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 1364
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
Query: 1365 AREDMAALEKDYEEVGVDSV 1424
AREDMAALEKDYEEVGVDSV
Sbjct: 421 AREDMAALEKDYEEVGVDSV 440
>ref|XP_001929621.1| PREDICTED: tubulin alpha-3 chain [Sus scrofa].
Length = 450
Score = 867 bits (2240), Expect = 0.0
Identities = 421/440 (95%), Positives = 427/440 (97%)
Frame = +3
Query: 105 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 284
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 285 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 464
HVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI+DLVLD
Sbjct: 61 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 120
Query: 465 RIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTA 644
RIRKLAD CTGLQGFL+FH LLMERLSVDYGKKSKLEF+IYPAPQVSTA
Sbjct: 121 RIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTA 180
Query: 645 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 824
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
Sbjct: 181 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 240
Query: 825 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 1004
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 300
Query: 1005 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 1184
QMVKCDPRHGKYMACC+LYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
Sbjct: 301 QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 360
Query: 1185 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 1364
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
Query: 1365 AREDMAALEKDYEEVGVDSV 1424
ARED+AALEKDYEEVGVDSV
Sbjct: 421 AREDLAALEKDYEEVGVDSV 440
>ref|XP_003133048.1| PREDICTED: tubulin alpha-3 chain-like [Sus scrofa].
Length = 450
Score = 867 bits (2240), Expect = 0.0
Identities = 421/440 (95%), Positives = 427/440 (97%)
Frame = +3
Query: 105 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 284
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 285 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 464
HVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI+DLVLD
Sbjct: 61 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 120
Query: 465 RIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTA 644
RIRKLAD CTGLQGFL+FH LLMERLSVDYGKKSKLEF+IYPAPQVSTA
Sbjct: 121 RIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTA 180
Query: 645 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 824
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
Sbjct: 181 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 240
Query: 825 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 1004
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 300
Query: 1005 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 1184
QMVKCDPRHGKYMACC+LYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
Sbjct: 301 QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 360
Query: 1185 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 1364
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
Query: 1365 AREDMAALEKDYEEVGVDSV 1424
ARED+AALEKDYEEVGVDSV
Sbjct: 421 AREDLAALEKDYEEVGVDSV 440
>ref|XP_001928233.1| PREDICTED: tubulin alpha-1D chain [Sus scrofa].
Length = 452
Score = 865 bits (2234), Expect = 0.0
Identities = 421/440 (95%), Positives = 426/440 (96%)
Frame = +3
Query: 105 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 284
MRECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
Sbjct: 1 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 285 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 464
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKE+IDLVLD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKELIDLVLD 120
Query: 465 RIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTA 644
RIRKLADQCTGLQGFL+FH LLMERLSVDYGKKSKLEFSIYPAPQVSTA
Sbjct: 121 RIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 180
Query: 645 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 824
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
Sbjct: 181 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 240
Query: 825 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 1004
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 300
Query: 1005 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 1184
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIA IKTKR+IQFVDWCPTGFKVGINYQPP
Sbjct: 301 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIAAIKTKRSIQFVDWCPTGFKVGINYQPP 360
Query: 1185 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 1364
TVVP GDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361 TVVPRGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
Query: 1365 AREDMAALEKDYEEVGVDSV 1424
AREDMAALEKDYEEVG+DSV
Sbjct: 421 AREDMAALEKDYEEVGMDSV 440
>ref|XP_003355423.1| PREDICTED: tubulin alpha-1C chain isoform 1 [Sus scrofa].
Length = 449
Score = 865 bits (2234), Expect = 0.0
Identities = 422/439 (96%), Positives = 425/439 (96%)
Frame = +3
Query: 105 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 284
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 285 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 464
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 120
Query: 465 RIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTA 644
RIRKLADQCTGLQGFLVFH LLMERLSVDYGKKSKLEFSIYPAPQVSTA
Sbjct: 121 RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 180
Query: 645 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 824
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRL+ QIVSSITA
Sbjct: 181 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLMSQIVSSITA 240
Query: 825 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 1004
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQL+VAEITNACFEPAN
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNACFEPAN 300
Query: 1005 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 1184
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKR+IQFVDWCPTGFKVGINYQPP
Sbjct: 301 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPP 360
Query: 1185 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 1364
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
Query: 1365 AREDMAALEKDYEEVGVDS 1421
AREDMAALEKDYEEVG DS
Sbjct: 421 AREDMAALEKDYEEVGADS 439
>ref|XP_001928370.3| PREDICTED: tubulin alpha-4A chain [Sus scrofa].
Length = 448
Score = 852 bits (2201), Expect = 0.0
Identities = 414/439 (94%), Positives = 420/439 (95%)
Frame = +3
Query: 105 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 284
MRECIS+HVGQAGVQ+GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSF TFF ETGAGK
Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFTTFFCETGAGK 60
Query: 285 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 464
HVPRAVFVDLEPTVIDE+R G YRQLFHPEQLITGKEDAANNYARGHYTIGKEIID VLD
Sbjct: 61 HVPRAVFVDLEPTVIDEIRNGPYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDPVLD 120
Query: 465 RIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTA 644
RIRKL+DQCTGLQGFLVFH LLMERLSVDYGKKSKLEFSIYPAPQVSTA
Sbjct: 121 RIRKLSDQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 180
Query: 645 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 824
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLI QIVSSITA
Sbjct: 181 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA 240
Query: 825 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 1004
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 300
Query: 1005 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 1184
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIA IKTKR+IQFVDWCPTGFKVGINYQPP
Sbjct: 301 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIAAIKTKRSIQFVDWCPTGFKVGINYQPP 360
Query: 1185 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 1364
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
Query: 1365 AREDMAALEKDYEEVGVDS 1421
AREDMAALEKDYEEVG+DS
Sbjct: 421 AREDMAALEKDYEEVGIDS 439
>ref|XP_003355425.1| PREDICTED: tubulin alpha-1C chain isoform 3 [Sus scrofa].
Length = 414
Score = 788 bits (2035), Expect = 0.0
Identities = 387/404 (95%), Positives = 390/404 (96%)
Frame = +3
Query: 210 MPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITG 389
MPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITG
Sbjct: 1 MPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITG 60
Query: 390 KEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLME 569
KEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFH LLME
Sbjct: 61 KEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLME 120
Query: 570 RLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRR 749
RLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRR
Sbjct: 121 RLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRR 180
Query: 750 NLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPV 929
NLDIERPTYTNLNRL+ QIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPV
Sbjct: 181 NLDIERPTYTNLNRLMSQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPV 240
Query: 930 ISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATI 1109
ISAEKAYHEQL+VAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATI
Sbjct: 241 ISAEKAYHEQLTVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATI 300
Query: 1110 KTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKF 1289
KTKR+IQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKF
Sbjct: 301 KTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKF 360
Query: 1290 DLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVGVDS 1421
DLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVG DS
Sbjct: 361 DLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVGADS 404
>ref|XP_003355424.1| PREDICTED: tubulin alpha-1C chain isoform 2 [Sus scrofa].
Length = 414
Score = 788 bits (2035), Expect = 0.0
Identities = 387/404 (95%), Positives = 390/404 (96%)
Frame = +3
Query: 210 MPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITG 389
MPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITG
Sbjct: 1 MPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITG 60
Query: 390 KEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLME 569
KEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFH LLME
Sbjct: 61 KEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLME 120
Query: 570 RLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRR 749
RLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRR
Sbjct: 121 RLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRR 180
Query: 750 NLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPV 929
NLDIERPTYTNLNRL+ QIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPV
Sbjct: 181 NLDIERPTYTNLNRLMSQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPV 240
Query: 930 ISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATI 1109
ISAEKAYHEQL+VAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATI
Sbjct: 241 ISAEKAYHEQLTVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATI 300
Query: 1110 KTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKF 1289
KTKR+IQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKF
Sbjct: 301 KTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKF 360
Query: 1290 DLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVGVDS 1421
DLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVG DS
Sbjct: 361 DLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVGADS 404
>ref|XP_003361673.1| PREDICTED: tubulin alpha-8 chain-like [Sus scrofa].
Length = 666
Score = 691 bits (1783), Expect = 0.0
Identities = 340/394 (86%), Positives = 353/394 (89%)
Frame = +3
Query: 240 DDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYAR 419
DDSF TFFSETG GKHVPRAV VDLEPTV+DEVR GTYRQLFHPEQLITGKEDAANNYAR
Sbjct: 270 DDSFTTFFSETGNGKHVPRAVMVDLEPTVVDEVRAGTYRQLFHPEQLITGKEDAANNYAR 329
Query: 420 GHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKS 599
GHYT+GKE IDLVLDRIRKL D C+GLQGFL+FH LLMERLS+DYGKKS
Sbjct: 330 GHYTVGKESIDLVLDRIRKLTDACSGLQGFLIFHSFGGGTGSGFTSLLMERLSLDYGKKS 389
Query: 600 KLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYT 779
KLEF+IYPAPQVSTAVVEPYNSILTTHTTLEHS+ AFMVDNEAIYDICRRNLDIERPTYT
Sbjct: 390 KLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSESAFMVDNEAIYDICRRNLDIERPTYT 449
Query: 780 NLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQ 959
NLNRLI QIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPL TYAP+ISAEKAYHEQ
Sbjct: 450 NLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPIISAEKAYHEQ 509
Query: 960 LSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVD 1139
LSVAEIT++CFEP +QMVKCDPRHGKYMACC+LYRGDVVPKDVN AIA IKTKRTIQFVD
Sbjct: 510 LSVAEITSSCFEPNSQMVKCDPRHGKYMACCMLYRGDVVPKDVNVAIAAIKTKRTIQFVD 569
Query: 1140 WCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFV 1319
WCPTGFKVGINYQPPTV LSNTTAIAEAWARLDHKFDLMYAKRAFV
Sbjct: 570 WCPTGFKVGINYQPPTV-------XXXXXXXXLSNTTAIAEAWARLDHKFDLMYAKRAFV 622
Query: 1320 HWYVGEGMEEGEFSEAREDMAALEKDYEEVGVDS 1421
HWYVGEGMEEGEFSEARED+AALEKDYEEVG DS
Sbjct: 623 HWYVGEGMEEGEFSEAREDLAALEKDYEEVGTDS 656
>ref|XP_003357831.1| PREDICTED: tubulin alpha chain-like 3-like [Sus scrofa].
Length = 497
Score = 669 bits (1725), Expect = 0.0
Identities = 314/472 (66%), Positives = 385/472 (81%), Gaps = 16/472 (3%)
Frame = +3
Query: 45 AVRSNNLSSPPSARRRKTAT-----MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQ 209
AV ++L + P+AR + A REC+S+H+GQAGVQIG+ACWELYCLEHGIQPDG
Sbjct: 28 AVPGSHLPASPAARLLRAAEDPAALQRECLSVHIGQAGVQIGDACWELYCLEHGIQPDGV 87
Query: 210 MPSDKTIGGGDD-----------SFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYR 356
+ + GG D SF++FF ET AGKHVPRA+F+DLEPTV+D +R G YR
Sbjct: 88 V-----LDGGKDRVAHKMELAGASFDSFFCETRAGKHVPRALFMDLEPTVVDGIRAGRYR 142
Query: 357 QLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHXXXXX 536
LFHPEQL++GKEDA+NNYARG YT+G EI+++VL+R+RKLA QC+GLQGFL+F
Sbjct: 143 SLFHPEQLVSGKEDASNNYARGRYTVGPEIVEIVLERLRKLAKQCSGLQGFLIFRSFGGG 202
Query: 537 XXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMV 716
LLME+L ++Y K+KLEFS+YPAP++STAVVEPYNS+LTTH T+EHSDC F++
Sbjct: 203 TGSGFTSLLMEQLLLEYSGKTKLEFSVYPAPRISTAVVEPYNSVLTTHPTIEHSDCTFLL 262
Query: 717 DNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPR 896
DNEA+YDIC LDIERP+Y ++NRL+ Q VSSITASLRF+GALNVDL EFQTNLVPYPR
Sbjct: 263 DNEAVYDICHHKLDIERPSYASINRLVSQAVSSITASLRFEGALNVDLVEFQTNLVPYPR 322
Query: 897 IHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVV 1076
IHFP+ ++AP++S + A+HE+ SV +IT ACF+ +NQ+VKCDP GKY+ACCLLYRGDVV
Sbjct: 323 IHFPMTSFAPILSPDNAHHEEPSVLDITAACFQRSNQLVKCDPGLGKYVACCLLYRGDVV 382
Query: 1077 PKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAI 1256
P++VNAAIA +K++ ++QFVDWCPTGFKVGIN PP VPGGDLA+ QRAVCMLSNTTA+
Sbjct: 383 PREVNAAIAAVKSRDSVQFVDWCPTGFKVGINGHPPRAVPGGDLAEAQRAVCMLSNTTAV 442
Query: 1257 AEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVG 1412
AEAWARL HKFDLM+AKRAF+HWY+ EGMEEGEF EARED+A LEKDYEEVG
Sbjct: 443 AEAWARLGHKFDLMFAKRAFLHWYIREGMEEGEFEEAREDLAVLEKDYEEVG 494
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 40,086,046
Number of extensions: 1156072
Number of successful extensions: 4865
Number of sequences better than 1.0e-05: 27
Number of HSP's gapped: 4786
Number of HSP's successfully gapped: 28
Length of query: 531
Length of database: 11,343,932
Length adjustment: 104
Effective length of query: 427
Effective length of database: 8,754,644
Effective search space: 3738232988
Effective search space used: 3738232988
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-000464
(1593 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr05 2099 0.0
Sscrofa_Chr13 1405 0.0
Sscrofa_Chr03 1138 0.0
Sscrofa_Chr11 868 0.0
Sscrofa_Chr15 769 0.0
Sscrofa_Chr14 515 e-143
gb|GL895007.2| Sus scrofa unplaced genomic scaffold ChrUScaf2891 424 e-116
gb|GL895352.1| Sus scrofa unplaced genomic scaffold chrU_scaffol... 194 1e-46
Sscrofa_Chr08 119 5e-24
Sscrofa_Chr10 103 3e-19
>Sscrofa_Chr05
|| Length = 111506441
Score = 2099 bits (1059), Expect = 0.0
Identities = 1106/1118 (98%), Gaps = 3/1118 (0%)
Strand = Plus / Minus
Query: 479 ggctgaccagtgcacaggtcttcagggcttcttggttttccacagctttggcgggggaac 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15593636 ggctgaccagtgcacaggtcttcagggcttcttggttttccacagctttggcgggggaac 15593577
Query: 539 gggttctgggttcacctccctgctgatggaacgtctctctgtcgattatggcaagaagtc 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15593576 gggttctgggttcacctccctgctgatggaacgtctctctgtcgattatggcaagaagtc 15593517
Query: 599 caagctggagttctccatttacccagccccccaggtttccacagctgtagttgagcccta 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15593516 caagctggagttctccatttacccagccccccaggtttccacagctgtagttgagcccta 15593457
Query: 659 caactccatcctcaccacccacaccaccctggagcactctgattgtgccttcatggtaga 718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15593456 caactccatcctcaccacccacaccaccctggagcactctgattgtgccttcatggtaga 15593397
Query: 719 caatgaggccatctatgacatctgtcgtagaaacctcgatattgaacgcccaacctacac 778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15593396 caatgaggccatctatgacatctgtcgtagaaacctcgatattgaacgcccaacctacac 15593337
Query: 779 taacctgaataggttgataggtcagattgtgtcctccatcactgcttccctgaggtttga 838
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15593336 taacctgaataggttgataggtcagattgtgtcctccatcactgcttccctgaggtttga 15593277
Query: 839 tggggccctgaatgttgatctgacagaattccagaccaacctggtgccctatccccgcat 898
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15593276 tggggccctgaatgttgatctgacagaattccagaccaacctggtgccctatccccgcat 15593217
Query: 899 ccatttccctctggccacatatgcccctgtcatctctgctgagaaagcctaccatgaaca 958
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15593216 ccatttccctctggccacatatgcccctgtcatctctgctgagaaagcctaccatgaaca 15593157
Query: 959 gctttctgtagcagagatcaccaatgcttgctttgagccagccaaccagatggtgaaatg 1018
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15593156 gctttctgtagcagagatcaccaatgcttgctttgagccagccaaccagatggtgaaatg 15593097
Query: 1019 tgaccctcgccatggtaaatacatggcctgctgcctgttgtaccgtggtgacgtggttcc 1078
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15593096 tgaccctcgccatggtaaatacatggcctgctgcctgttgtaccgtggtgacgtggttcc 15593037
Query: 1079 caaagacgtcaatgccgccatcgccaccatcaagaccaagcgtaccatccagtttgtgga 1138
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15593036 caaagacgtcaatgccgccatcgccaccatcaagaccaagcgtaccatccagtttgtgga 15592977
Query: 1139 ctggtgccccactggcttcaaggttggcattaattaccagccccccactgtggtccccgg 1198
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15592976 ctggtgccccactggcttcaaggttggcattaattaccagccccccactgtggtccccgg 15592917
Query: 1199 tggagacctggccaaagtacagcgggcagtgtgcatgctgagcaacaccacagccatcgc 1258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15592916 tggagacctggccaaagtacagcgggcagtgtgcatgctgagcaacaccacagccatcgc 15592857
Query: 1259 tgaggcctgggctcgcctggaccacaagtttgacctgatgtatgccaagcgtgcctttgt 1318
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15592856 tgaggcctgggctcgcctggaccacaagtttgacctgatgtatgccaagcgtgcctttgt 15592797
Query: 1319 tcactggtacgtgggtgagggcatggaggaaggagagttttctgaggcccgtgaggacat 1378
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15592796 tcactggtacgtgggtgagggcatggaggaaggagagttttctgaggcccgtgaggacat 15592737
Query: 1379 ggctgcccttgagaaggattacgaggaggttggtgtggattctgttgaaagagagggaga 1438
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 15592736 ggctgcccttgagaaggattacgaggaggttggtgtggattctgttgaaggagagggaga 15592677
Query: 1439 gggaaaaggcgaggaatactaaagtt-aaatgtcacaaaggtgctgcttttacaggaaag 1497
|| | ||||||||||||||||||||| ||||||||||||||||||||||||||||| |||
Sbjct: 15592676 ggaagaaggcgaggaatactaaagttaaaatgtcacaaaggtgctgcttttacagggaag 15592617
Query: 1498 ctta-tctgtttt-aacattgaaaagttgtgggctgatcagttaatttgtatgtaacant 1555
|||| |||||||| |||||||||||||||||| |||||||||||||||||||||| || |
Sbjct: 15592616 cttattctgttttaaacattgaaaagttgtggtctgatcagttaatttgtatgtagcagt 15592557
Query: 1556 ggatactctcaaatacaattactgacctatgctttaaa 1593
| ||||||||| ||||||||||||||||||||||||||
Sbjct: 15592556 gaatactctcatatacaattactgacctatgctttaaa 15592519
Score = 1772 bits (894), Expect = 0.0
Identities = 960/982 (97%)
Strand = Plus / Minus
Query: 479 ggctgaccagtgcacaggtcttcagggcttcttggttttccacagctttggcgggggaac 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15557777 ggctgaccagtgcacaggtcttcagggcttcttggttttccacagctttggcgggggaac 15557718
Query: 539 gggttctgggttcacctccctgctgatggaacgtctctctgtcgattatggcaagaagtc 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15557717 gggttctgggttcacctccctgctgatggaacgtctctctgtcgattatggcaagaagtc 15557658
Query: 599 caagctggagttctccatttacccagccccccaggtttccacagctgtagttgagcccta 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15557657 caagctggagttctccatttacccagccccccaggtttccacagctgtagttgagcccta 15557598
Query: 659 caactccatcctcaccacccacaccaccctggagcactctgattgtgccttcatggtaga 718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15557597 caactccatcctcaccacccacaccaccctggagcactctgattgtgccttcatggtaga 15557538
Query: 719 caatgaggccatctatgacatctgtcgtagaaacctcgatattgaacgcccaacctacac 778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15557537 caatgaggccatctatgacatctgtcgtagaaacctcgatattgaacgcccaacctacac 15557478
Query: 779 taacctgaataggttgataggtcagattgtgtcctccatcactgcttccctgaggtttga 838
||| ||||| | | || | || |||||||||||||||||||||||||||||||||||
Sbjct: 15557477 taatctgaaccgccttattagccaaattgtgtcctccatcactgcttccctgaggtttga 15557418
Query: 839 tggggccctgaatgttgatctgacagaattccagaccaacctggtgccctatccccgcat 898
|||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 15557417 tggggccctgaacgttgatctgacagaattccagaccaacctggtgccctacccccgcat 15557358
Query: 899 ccatttccctctggccacatatgcccctgtcatctctgctgagaaagcctaccatgaaca 958
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 15557357 ccatttccctctggccacatacgcccctgtcatctctgctgagaaagcctaccatgaaca 15557298
Query: 959 gctttctgtagcagagatcaccaatgcttgctttgagccagccaaccagatggtgaaatg 1018
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 15557297 gctttctgtagcagagatcactaatgcttgctttgagccagccaaccagatggtgaaatg 15557238
Query: 1019 tgaccctcgccatggtaaatacatggcctgctgcctgttgtaccgtggtgacgtggttcc 1078
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15557237 tgaccctcgccatggtaaatacatggcctgctgcctgttgtaccgtggtgacgtggttcc 15557178
Query: 1079 caaagacgtcaatgccgccatcgccaccatcaagaccaagcgtaccatccagtttgtgga 1138
||||||||||||||| ||||| |||||||||||||||||||| | |||||||||||||||
Sbjct: 15557177 caaagacgtcaatgctgccattgccaccatcaagaccaagcgcagcatccagtttgtgga 15557118
Query: 1139 ctggtgccccactggcttcaaggttggcattaattaccagccccccactgtggtccccgg 1198
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 15557117 ctggtgccccactggcttcaaggttggcattaattaccagccccccactgtggtccctgg 15557058
Query: 1199 tggagacctggccaaagtacagcgggcagtgtgcatgctgagcaacaccacagccatcgc 1258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15557057 tggagacctggccaaagtacagcgggcagtgtgcatgctgagcaacaccacagccatcgc 15556998
Query: 1259 tgaggcctgggctcgcctggaccacaagtttgacctgatgtatgccaagcgtgcctttgt 1318
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15556997 tgaggcctgggctcgcctggaccacaagtttgacctgatgtatgccaagcgtgcctttgt 15556938
Query: 1319 tcactggtacgtgggtgagggcatggaggaaggagagttttctgaggcccgtgaggacat 1378
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15556937 tcactggtacgtgggtgagggcatggaggaaggagagttttctgaggcccgtgaggacat 15556878
Query: 1379 ggctgcccttgagaaggattacgaggaggttggtgtggattctgttgaaagagagggaga 1438
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 15556877 ggctgcccttgagaaggattacgaggaggttggtgtggattctgttgaaggagagggaga 15556818
Query: 1439 gggaaaaggcgaggaatactaa 1460
|| | |||||||||||||||||
Sbjct: 15556817 ggaagaaggcgaggaatactaa 15556796
Score = 1691 bits (853), Expect = 0.0
Identities = 913/933 (97%)
Strand = Plus / Plus
Query: 479 ggctgaccagtgcacaggtcttcagggcttcttggttttccacagctttggcgggggaac 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15675141 ggctgaccagtgcacaggtcttcagggcttcttggttttccacagctttggcgggggaac 15675200
Query: 539 gggttctgggttcacctccctgctgatggaacgtctctctgtcgattatggcaagaagtc 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15675201 gggttctgggttcacctccctgctgatggaacgtctctctgtcgattatggcaagaagtc 15675260
Query: 599 caagctggagttctccatttacccagccccccaggtttccacagctgtagttgagcccta 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15675261 caagctggagttctccatttacccagccccccaggtttccacagctgtagttgagcccta 15675320
Query: 659 caactccatcctcaccacccacaccaccctggagcactctgattgtgccttcatggtaga 718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15675321 caactccatcctcaccacccacaccaccctggagcactctgattgtgccttcatggtaga 15675380
Query: 719 caatgaggccatctatgacatctgtcgtagaaacctcgatattgaacgcccaacctacac 778
||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 15675381 caatgaggccatctacgacatctgtcgtagaaaccttgatattgaacgcccaacctacac 15675440
Query: 779 taacctgaataggttgataggtcagattgtgtcctccatcactgcttccctgaggtttga 838
||| ||||| | | || | || |||||||||||||||||||||||||||||||||||
Sbjct: 15675441 taatctgaaccgcctcatgagccaaattgtgtcctccatcactgcttccctgaggtttga 15675500
Query: 839 tggggccctgaatgttgatctgacagaattccagaccaacctggtgccctatccccgcat 898
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 15675501 tggggccctgaatgttgatctgacagaattccagaccaacctggtgccctacccccgcat 15675560
Query: 899 ccatttccctctggccacatatgcccctgtcatctctgctgagaaagcctaccatgaaca 958
||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 15675561 ccatttccctctggccacatacgcccccgtcatctctgctgagaaagcctaccatgaaca 15675620
Query: 959 gctttctgtagcagagatcaccaatgcttgctttgagccagccaaccagatggtgaaatg 1018
|||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 15675621 gcttactgtagcagagatcactaatgcttgctttgagccagccaaccagatggtgaaatg 15675680
Query: 1019 tgaccctcgccatggtaaatacatggcctgctgcctgttgtaccgtggtgacgtggttcc 1078
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15675681 tgaccctcgccatggtaaatacatggcctgctgcctgttgtaccgtggtgacgtggttcc 15675740
Query: 1079 caaagacgtcaatgccgccatcgccaccatcaagaccaagcgtaccatccagtttgtgga 1138
|||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 15675741 caaagacgtcaatgccgccatcgccaccatcaagaccaagcgcagcatccagtttgtgga 15675800
Query: 1139 ctggtgccccactggcttcaaggttggcattaattaccagccccccactgtggtccccgg 1198
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 15675801 ctggtgccccactggcttcaaggttggcattaattaccagccccccactgtggtccctgg 15675860
Query: 1199 tggagacctggccaaagtacagcgggcagtgtgcatgctgagcaacaccacagccatcgc 1258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15675861 tggagacctggccaaagtacagcgggcagtgtgcatgctgagcaacaccacagccatcgc 15675920
Query: 1259 tgaggcctgggctcgcctggaccacaagtttgacctgatgtatgccaagcgtgcctttgt 1318
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15675921 tgaggcctgggctcgcctggaccacaagtttgacctgatgtatgccaagcgtgcctttgt 15675980
Query: 1319 tcactggtacgtgggtgagggcatggaggaaggagagttttctgaggcccgtgaggacat 1378
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15675981 tcactggtacgtgggtgagggcatggaggaaggagagttttctgaggcccgtgaggacat 15676040
Query: 1379 ggctgcccttgagaaggattacgaggaggttgg 1411
|||||||||||||||||||||||||||||||||
Sbjct: 15676041 ggctgcccttgagaaggattacgaggaggttgg 15676073
Score = 846 bits (427), Expect = 0.0
Identities = 571/619 (92%), Gaps = 15/619 (2%)
Strand = Plus / Minus
Query: 839 tggggccctgaatgttgatctgacagaattccagaccaacctggtgccctatccccgcat 898
||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 23375374 tggggccctgaatgttgatctgacagaattccagaccaatctggtgccctacccccgcat 23375315
Query: 899 ccatttccctctggccacatatgcccctgtcatctctgctgagaaagcctaccatgaaca 958
||||||| ||||||||||||| ||||||| ||| | |||||| ||||
Sbjct: 23375314 ccatttctctctggccacatacgcccctg------ctgtt--------ctaccaggaacg 23375269
Query: 959 gctttctgtagcagagatcaccaatgcttgctttgagccagccaaccagatggtgaaatg 1018
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 23375268 gctttctgtagcagagatcactaatgcttgctttgagccagccaaccagatggtgaaatg 23375209
Query: 1019 tgaccctcgccatggtaaatacatggcctgctgcctgttgtaccgtggtgacgtggttcc 1078
||||||| ||||||||||||||||||||| ||||| ||||||| |||||||||||||||
Sbjct: 23375208 cgaccctcaccatggtaaatacatggcctgatgcctattgtaccatggtgacgtggttcc 23375149
Query: 1079 caaagacgtcaatgccgccatcgccaccatcaagaccaagcgtaccatccagtttgtgga 1138
||||||| ||||||||||||| |||||||||||||||||||| | |||||||||||||||
Sbjct: 23375148 caaagacatcaatgccgccattgccaccatcaagaccaagcgcagcatccagtttgtgga 23375089
Query: 1139 ctggtgccccactggcttcaaggttggcattaattaccagccccccactgtggtccccgg 1198
|||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
Sbjct: 23375088 ctggtgccccactggcttcaaggttggcattaattaccagccccccactgtggtggcctg 23375029
Query: 1199 t-ggagacctggccaaagtacagcgggcagtgtgcatgctgagcaacaccacagccatcg 1257
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23375028 acggagacctggccaaagtacagcgggcagtgtgcatgctgagcaacaccacagccatcg 23374969
Query: 1258 ctgaggcctgggctcgcctggaccacaagtttgacctgatgtatgccaagcgtgcctttg 1317
|||||| ||||||| ||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 23374968 ctgaggactgggcttgcctggaccacaagtttgacctgatgtatgccaagtgtgcctttg 23374909
Query: 1318 ttcactggtacgtgggtgagggcatggaggaaggagagttttctgaggcccgtgaggaca 1377
|||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23374908 ttcactagtatgtgggtgagggcatggaggaaggagagttttctgaggcccgtgaggaca 23374849
Query: 1378 tggctgcccttgagaaggattacgaggaggttggtgtggattctgttgaaagagagggag 1437
|||||||||||||||||||||| ||| ||||||||| |||||||||||| |||||||||
Sbjct: 23374848 tggctgcccttgagaaggattatgagaaggttggtgaggattctgttgagggagagggag 23374789
Query: 1438 agggaaaaggcgaggaata 1456
||| | |||||||||||||
Sbjct: 23374788 aggaagaaggcgaggaata 23374770
Score = 846 bits (427), Expect = 0.0
Identities = 571/619 (92%), Gaps = 15/619 (2%)
Strand = Plus / Minus
Query: 839 tggggccctgaatgttgatctgacagaattccagaccaacctggtgccctatccccgcat 898
||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 23553189 tggggccctgaatgttgatctgacagaattccagaccaatctggtgccctacccccgcat 23553130
Query: 899 ccatttccctctggccacatatgcccctgtcatctctgctgagaaagcctaccatgaaca 958
||||||| ||||||||||||| ||||||| ||| | |||||| ||||
Sbjct: 23553129 ccatttctctctggccacatacgcccctg------ctgtt--------ctaccaggaacg 23553084
Query: 959 gctttctgtagcagagatcaccaatgcttgctttgagccagccaaccagatggtgaaatg 1018
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 23553083 gctttctgtagcagagatcactaatgcttgctttgagccagccaaccagatggtgaaatg 23553024
Query: 1019 tgaccctcgccatggtaaatacatggcctgctgcctgttgtaccgtggtgacgtggttcc 1078
||||||| ||||||||||||||||||||| ||||| ||||||| |||||||||||||||
Sbjct: 23553023 cgaccctcaccatggtaaatacatggcctgatgcctattgtaccatggtgacgtggttcc 23552964
Query: 1079 caaagacgtcaatgccgccatcgccaccatcaagaccaagcgtaccatccagtttgtgga 1138
||||||| ||||||||||||| |||||||||||||||||||| | |||||||||||||||
Sbjct: 23552963 caaagacatcaatgccgccattgccaccatcaagaccaagcgcagcatccagtttgtgga 23552904
Query: 1139 ctggtgccccactggcttcaaggttggcattaattaccagccccccactgtggtccccgg 1198
|||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
Sbjct: 23552903 ctggtgccccactggcttcaaggttggcattaattaccagccccccactgtggtggcctg 23552844
Query: 1199 t-ggagacctggccaaagtacagcgggcagtgtgcatgctgagcaacaccacagccatcg 1257
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23552843 acggagacctggccaaagtacagcgggcagtgtgcatgctgagcaacaccacagccatcg 23552784
Query: 1258 ctgaggcctgggctcgcctggaccacaagtttgacctgatgtatgccaagcgtgcctttg 1317
|||||| ||||||| ||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 23552783 ctgaggactgggcttgcctggaccacaagtttgacctgatgtatgccaagtgtgcctttg 23552724
Query: 1318 ttcactggtacgtgggtgagggcatggaggaaggagagttttctgaggcccgtgaggaca 1377
|||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23552723 ttcactagtatgtgggtgagggcatggaggaaggagagttttctgaggcccgtgaggaca 23552664
Query: 1378 tggctgcccttgagaaggattacgaggaggttggtgtggattctgttgaaagagagggag 1437
|||||||||||||||||||||| ||| ||||||||| |||||||||||| |||||||||
Sbjct: 23552663 tggctgcccttgagaaggattatgagaaggttggtgaggattctgttgagggagagggag 23552604
Query: 1438 agggaaaaggcgaggaata 1456
||| | |||||||||||||
Sbjct: 23552603 aggaagaaggcgaggaata 23552585
Score = 444 bits (224), Expect = e-122
Identities = 224/224 (100%)
Strand = Plus / Minus
Query: 107 gcgtgagtgcatctccatccacgttggccaagctggtgtccagatcggcaatgcctgctg 166
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15558559 gcgtgagtgcatctccatccacgttggccaagctggtgtccagatcggcaatgcctgctg 15558500
Query: 167 ggagctctactgcctggaacacggcatccagcccgatggccagatgccgagtgacaagac 226
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15558499 ggagctctactgcctggaacacggcatccagcccgatggccagatgccgagtgacaagac 15558440
Query: 227 cattgggggaggagatgactccttcaacaccttcttcagtgagacaggcgctggcaagca 286
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15558439 cattgggggaggagatgactccttcaacaccttcttcagtgagacaggcgctggcaagca 15558380
Query: 287 tgtgcccagggcagtgtttgtagacctggaacccacagtcattg 330
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15558379 tgtgcccagggcagtgtttgtagacctggaacccacagtcattg 15558336
Score = 444 bits (224), Expect = e-122
Identities = 224/224 (100%)
Strand = Plus / Minus
Query: 107 gcgtgagtgcatctccatccacgttggccaagctggtgtccagatcggcaatgcctgctg 166
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15594415 gcgtgagtgcatctccatccacgttggccaagctggtgtccagatcggcaatgcctgctg 15594356
Query: 167 ggagctctactgcctggaacacggcatccagcccgatggccagatgccgagtgacaagac 226
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15594355 ggagctctactgcctggaacacggcatccagcccgatggccagatgccgagtgacaagac 15594296
Query: 227 cattgggggaggagatgactccttcaacaccttcttcagtgagacaggcgctggcaagca 286
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15594295 cattgggggaggagatgactccttcaacaccttcttcagtgagacaggcgctggcaagca 15594236
Query: 287 tgtgcccagggcagtgtttgtagacctggaacccacagtcattg 330
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15594235 tgtgcccagggcagtgtttgtagacctggaacccacagtcattg 15594192
Score = 440 bits (222), Expect = e-120
Identities = 552/662 (83%)
Strand = Plus / Plus
Query: 501 cagggcttcttggttttccacagctttggcgggggaacgggttctgggttcacctccctg 560
||||||||| || | |||||||| ||||| ||||| || || ||||| ||||| || |||
Sbjct: 72522876 cagggcttcctgatcttccacagttttggggggggcaccggctctggcttcacttctctg 72522935
Query: 561 ctgatggaacgtctctctgtcgattatggcaagaagtccaagctggagttctccatttac 620
||||||||||| ||||| | ||||| ||||||||||||||||| ||||| |||| |||
Sbjct: 72522936 ctgatggaacgcctctccctggattacggcaagaagtccaagctagagtttgccatctac 72522995
Query: 621 ccagccccccaggtttccacagctgtagttgagccctacaactccatcctcaccacccac 680
|| || |||||||| ||||| || || || || ||||||||||||||||| |||||||||
Sbjct: 72522996 ccggcaccccaggtctccacggccgtggtggaaccctacaactccatcctgaccacccac 72523055
Query: 681 accaccctggagcactctgattgtgccttcatggtagacaatgaggccatctatgacatc 740
||||||||||| || || || |||||||||||||| ||||| ||||||||||| ||||||
Sbjct: 72523056 accaccctggaacattcagactgtgccttcatggtggacaacgaggccatctacgacatc 72523115
Query: 741 tgtcgtagaaacctcgatattgaacgcccaacctacactaacctgaataggttgataggt 800
|| || || ||||| || || || ||||| |||||||| ||||| || | | || |
Sbjct: 72523116 tgccgcaggaacctggacatcgagcgccccacctacaccaacctcaaccgcctcatcagc 72523175
Query: 801 cagattgtgtcctccatcactgcttccctgaggtttgatggggccctgaatgttgatctg 860
||||| |||||||||||||| || |||||| | |||||||||||||| || || || |||
Sbjct: 72523176 cagatcgtgtcctccatcaccgcctccctgcgctttgatggggccctcaacgtggacctg 72523235
Query: 861 acagaattccagaccaacctggtgccctatccccgcatccatttccctctggccacatat 920
|| || ||||||||||||||||||||||| ||||||||||| ||||| |||| ||| ||
Sbjct: 72523236 accgagttccagaccaacctggtgccctacccccgcatccacttccccctggtcacctac 72523295
Query: 921 gcccctgtcatctctgctgagaaagcctaccatgaacagctttctgtagcagagatcacc 980
|| || |||||||||||||||| |||||||| || ||||| ||||| || |||||||||
Sbjct: 72523296 gcacccatcatctctgctgagaaggcctaccacgagcagctctctgtggctgagatcacc 72523355
Query: 981 aatgcttgctttgagccagccaaccagatggtgaaatgtgaccctcgccatggtaaatac 1040
| | ||||||||||| || |||||||||||| ||||| || || ||||| || |||
Sbjct: 72523356 agctcctgctttgagcccaacagccagatggtgaagtgtgatccccgtcatggcaagtac 72523415
Query: 1041 atggcctgctgcctgttgtaccgtggtgacgtggttcccaaagacgtcaatgccgccatc 1100
|||||||||||| || | ||||| || |||||||| ||||| |||||||| | ||||||
Sbjct: 72523416 atggcctgctgcatgctctaccggggggacgtggtgcccaaggacgtcaacgtcgccatt 72523475
Query: 1101 gccaccatcaagaccaagcgtaccatccagtttgtggactggtgccccactggcttcaag 1160
||| |||||||||||||| | |||||||||||||| |||||||| ||||| |||||||||
Sbjct: 72523476 gccgccatcaagaccaagaggaccatccagtttgtagactggtgtcccacaggcttcaag 72523535
Query: 1161 gt 1162
||
Sbjct: 72523536 gt 72523537
Score = 436 bits (220), Expect = e-119
Identities = 223/224 (99%)
Strand = Plus / Plus
Query: 107 gcgtgagtgcatctccatccacgttggccaagctggtgtccagatcggcaatgcctgctg 166
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15672306 gcgtgagtgcatctccatccacgttggccaagctggtgtccagatcggcaatgcctgctg 15672365
Query: 167 ggagctctactgcctggaacacggcatccagcccgatggccagatgccgagtgacaagac 226
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15672366 ggagctctactgcctggaacacggcatccagcccgatggccagatgccgagtgacaagac 15672425
Query: 227 cattgggggaggagatgactccttcaacaccttcttcagtgagacaggcgctggcaagca 286
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 15672426 cattgggggaggagatgactccttcaacaccttcttcagtgagacaggagctggcaagca 15672485
Query: 287 tgtgcccagggcagtgtttgtagacctggaacccacagtcattg 330
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15672486 tgtgcccagggcagtgtttgtagacctggaacccacagtcattg 15672529
Score = 299 bits (151), Expect = 2e-78
Identities = 151/151 (100%)
Strand = Plus / Minus
Query: 330 gatgaagttcgcactggcacctaccgccagctcttccaccctgagcagctcatcacaggc 389
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15558187 gatgaagttcgcactggcacctaccgccagctcttccaccctgagcagctcatcacaggc 15558128
Query: 390 aaggaagatgctgccaataactatgcccgaggtcactacaccattggcaaggagatcatt 449
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15558127 aaggaagatgctgccaataactatgcccgaggtcactacaccattggcaaggagatcatt 15558068
Query: 450 gacctcgtcttggaccgaattcggaaactgg 480
|||||||||||||||||||||||||||||||
Sbjct: 15558067 gacctcgtcttggaccgaattcggaaactgg 15558037
Score = 299 bits (151), Expect = 2e-78
Identities = 151/151 (100%)
Strand = Plus / Minus
Query: 330 gatgaagttcgcactggcacctaccgccagctcttccaccctgagcagctcatcacaggc 389
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15594043 gatgaagttcgcactggcacctaccgccagctcttccaccctgagcagctcatcacaggc 15593984
Query: 390 aaggaagatgctgccaataactatgcccgaggtcactacaccattggcaaggagatcatt 449
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15593983 aaggaagatgctgccaataactatgcccgaggtcactacaccattggcaaggagatcatt 15593924
Query: 450 gacctcgtcttggaccgaattcggaaactgg 480
|||||||||||||||||||||||||||||||
Sbjct: 15593923 gacctcgtcttggaccgaattcggaaactgg 15593893
Score = 299 bits (151), Expect = 2e-78
Identities = 151/151 (100%)
Strand = Plus / Plus
Query: 330 gatgaagttcgcactggcacctaccgccagctcttccaccctgagcagctcatcacaggc 389
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15672678 gatgaagttcgcactggcacctaccgccagctcttccaccctgagcagctcatcacaggc 15672737
Query: 390 aaggaagatgctgccaataactatgcccgaggtcactacaccattggcaaggagatcatt 449
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15672738 aaggaagatgctgccaataactatgcccgaggtcactacaccattggcaaggagatcatt 15672797
Query: 450 gacctcgtcttggaccgaattcggaaactgg 480
|||||||||||||||||||||||||||||||
Sbjct: 15672798 gacctcgtcttggaccgaattcggaaactgg 15672828
Score = 268 bits (135), Expect = 9e-69
Identities = 219/247 (88%)
Strand = Plus / Plus
Query: 1159 aggttggcattaattaccagccccccactgtggtccccggtggagacctggccaaagtac 1218
|||| ||||| || ||||||||||| || ||||| || || |||||||||||||| || |
Sbjct: 72526912 aggtgggcatcaactaccagcccccgacggtggtgccagggggagacctggccaaggtgc 72526971
Query: 1219 agcgggcagtgtgcatgctgagcaacaccacagccatcgctgaggcctgggctcgcctgg 1278
||||||| ||||||||||||||||||||||| |||||||| ||||||||||| |||||||
Sbjct: 72526972 agcgggccgtgtgcatgctgagcaacaccacggccatcgcggaggcctgggcccgcctgg 72527031
Query: 1279 accacaagtttgacctgatgtatgccaagcgtgcctttgttcactggtacgtgggtgagg 1338
|||||||||| ||||||||||| |||||||||||||| || |||||||| || || ||||
Sbjct: 72527032 accacaagttcgacctgatgtacgccaagcgtgccttcgtgcactggtatgtcggcgagg 72527091
Query: 1339 gcatggaggaaggagagttttctgaggcccgtgaggacatggctgcccttgagaaggatt 1398
| ||||| |||||||| |||||||||||||| |||||| |||||||||| ||||||||||
Sbjct: 72527092 ggatggaagaaggagaattttctgaggcccgggaggacctggctgccctggagaaggatt 72527151
Query: 1399 acgagga 1405
| |||||
Sbjct: 72527152 atgagga 72527158
Score = 194 bits (98), Expect = 1e-46
Identities = 101/102 (99%)
Strand = Plus / Minus
Query: 6 gtgcggcaggttctcttacatcgaccgcttaagagtcgcgctgtaagaagcaacaacctc 65
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15596564 gtgccgcaggttctcttacatcgaccgcttaagagtcgcgctgtaagaagcaacaacctc 15596505
Query: 66 tcttctccgccatctgctcggcgccgcaaaacagcaactatg 107
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15596504 tcttctccgccatctgctcggcgccgcaaaacagcaactatg 15596463
Score = 103 bits (52), Expect = 3e-19
Identities = 76/84 (90%)
Strand = Plus / Plus
Query: 114 tgcatctccatccacgttggccaagctggtgtccagatcggcaatgcctgctgggagctc 173
||||| ||| ||||||| |||||||| || || |||||||||||||||||||||||||||
Sbjct: 72519106 tgcatatccgtccacgtgggccaagccggggttcagatcggcaatgcctgctgggagctc 72519165
Query: 174 tactgcctggaacacggcatccag 197
| ||||||||| ||||||||||||
Sbjct: 72519166 ttctgcctggagcacggcatccag 72519189
Score = 89.7 bits (45), Expect = 4e-15
Identities = 84/97 (86%)
Strand = Plus / Plus
Query: 348 acctaccgccagctcttccaccctgagcagctcatcacaggcaaggaagatgctgccaat 407
|||||||||||||||||||| || |||||||| |||||||| || || ||||| |||||
Sbjct: 72520765 acctaccgccagctcttccatccagagcagctgatcacaggaaaagaggatgcagccaac 72520824
Query: 408 aactatgcccgaggtcactacaccattggcaaggaga 444
||||||||||| || |||||||| | ||||||||||
Sbjct: 72520825 aactatgcccggggccactacacagtgggcaaggaga 72520861
>Sscrofa_Chr13
|| Length = 218635234
Score = 1405 bits (709), Expect = 0.0
Identities = 1174/1332 (88%), Gaps = 39/1332 (2%)
Strand = Plus / Minus
Query: 109 gtgagtgcatctccatccacgttggccaagctggtgtccagatcggcaatgcctgctggg 168
||||||||||||| |||||| ||||||||||||||||||||||| ||| |||||||||||
Sbjct: 106118414 gtgagtgcatctctatccacattggccaagctggtgtccagatcagcagtgcctgctggg 106118355
Query: 169 agctctactgcctggaacacggcatccagcccgatggccagatgccgagtgacaagacca 228
|||| |||||||||||||| ||| || ||| ||||||||
Sbjct: 106118354 agctatactgcctggaaca---------------------gataccaagtaacaagaccc 106118316
Query: 229 ttgggggaggagatgactccttcaacaccttcttca-gtgagacaggcgctggcaagcat 287
||||||||||||||||||||||||||||||||| | |||||| ||| ||||||||||||
Sbjct: 106118315 ctgggggaggagatgactccttcaacaccttctttaagtgagataggagctggcaagcat 106118256
Query: 288 gtgcccagggcagtgtttgtagacctggaacccacagtcattgatgaagttcgcactggc 347
||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 106118255 gtgcccagggcag-gtttgtagacctggaacccacagtcattgatgaagttagcactggc 106118197
Query: 348 acctaccgccagctcttccaccctgagcagctcatcacaggcaaggaagatgctgccaat 407
|||||| ||| ||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 106118196 acctactgcctgctcttccaccctgagcagctcatcacaggcaaaaaagatgctgccaat 106118137
Query: 408 aactatgcccgaggtcactacaccattggcaaggagatcattgacctcgtcttggaccga 467
|||||| || || ||||||| |||||||||||||||||||||||||| ||||||||| |
Sbjct: 106118136 aactattccagaagtcactatcccattggcaaggagatcattgacctcatcttggaccca 106118077
Query: 468 attcggaaactggctgaccagtgcacaggtcttcagggcttcttggttttccacagcttt 527
||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106118076 gttcagaa-ctggctgaccagtgcacaggtcttcagggcttcttggttttccacagcttt 106118018
Query: 528 ggcgggggaa-cgggttctgggttcacctccctgctgatggaacgtctctctgtcgatta 586
|| |||||| | ||||||||||||||||| ||||||||||||||| |||||||||||||
Sbjct: 106118017 ggttggggaaactggttctgggttcacctctctgctgatggaacgtttctctgtcgatta 106117958
Query: 587 tggcaagaagtccaagctggagttctccatttacccagccccccaggtttccacagctgt 646
||| || |||||||||||||| ||||||||||| |||||||| ||||||||||||||||
Sbjct: 106117957 tgggaataagtccaagctggaattctccatttattcagccccctaggtttccacagctgt 106117898
Query: 647 agttgagccctacaactccatcctcaccacccacaccaccctggagcactctgattgtgc 706
|| |||||| |||| |||||||| ||||||||||||||| ||||| |||||||||||||
Sbjct: 106117897 aggtgagccttacatttccatccttaccacccacaccaccgtggagaactctgattgtgc 106117838
Query: 707 cttcatggtagacaatgaggccatctatgacatctgtcgtagaaacctcgatattgaacg 766
||||||||||||||||||||||||||||||||||| || ||||||||| |||||||| |
Sbjct: 106117837 cttcatggtagacaatgaggccatctatgacatctttcatagaaaccttgatattgagca 106117778
Query: 767 cccaacctacactaacctgaataggttgataggtcagattgtgtcctccatcactgcttc 826
|||| ||||||||| ||||| | || | ||||||||||||||||||||||||||
Sbjct: 106117777 cccatcctacactactctgaaccacctcattagccagattgtgtcctccatcactgcttc 106117718
Query: 827 cctgaggtttgatggggccctgaatgttgatctgacagaattccagaccaacctggtgcc 886
|||||||||||||| ||| |||||||||||||||||||||||||||||| | || ||||
Sbjct: 106117717 tctgaggtttgatggagccatgaatgttgatctgacagaattccagaccagcttgttgcc 106117658
Query: 887 ctatccccgcatccatttccctctggccacatatgcccctgtcatctctgctgagaaagc 946
||| || |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106117657 ctactcctgcatccatttccctctggccacatatgcccctgtcatctctgctgagaaagt 106117598
Query: 947 ctaccatgaacagctttctgtagcagagatcaccaatgcttgctttgagccagccaacca 1006
||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 106117597 cta--------------ctgtagcagagatcaccaatgcttgctttaggccagccaacca 106117552
Query: 1007 gatggtgaaatgtgaccctcgccatggtaaatacatggcctgctgcctgttgtaccgtgg 1066
||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106117551 gatggtgaaatttgatcctcgccatggtaaatacatggcctgctgcctgttgtaccgtgg 106117492
Query: 1067 tgacgtggttcccaaagacgtcaatgccgccatcgccaccatcaagaccaagcgtaccat 1126
| | ||||||| |||| ||||||||| |||| |||||||| |||||||||| | |||
Sbjct: 106117491 cgtcacggttcccgaagaagtcaatgccaccattgccaccataaagaccaagcacagcat 106117432
Query: 1127 ccagtttgtggactggtgccccactggcttcaaggttggcattaattaccagccccccac 1186
|||||||||||||||||||||| |||||| || | ||||||| || ||||||| |||||
Sbjct: 106117431 tcagtttgtggactggtgccccaatggcttaaaagctggcattgataaccagccacccac 106117372
Query: 1187 tgtggtccccggtggagacctggccaaagtacagcgggcagtgtgcatgctgagcaacac 1246
||||||||| ||||||| ||||| ||||||||| |||| |||||| |||||||||||||
Sbjct: 106117371 tgtggtcccttgtggagatctggcaaaagtacagagggctgtgtgcgtgctgagcaacac 106117312
Query: 1247 cacagccatcgctgaggcctgggctcgcctggaccacaagtttgacctgatgtatgccaa 1306
|||||||||| |||| ||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 106117311 cacagccatcaatgagacctgggctcacctggaccacaagtttgacctgacatatgccaa 106117252
Query: 1307 gcgtgcctttgttcactggtacgtgggtgagggcatggaggaaggagagttttctgaggc 1366
|| ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 106117251 gcatgcctttgttcgctggtacgtggatgagggcatggaggaaggagagttttctgaggc 106117192
Query: 1367 ccgtgaggacatggctgcccttgagaaggattacgaggaggttggtgtggattctgttga 1426
| || || ||||||||||||||||||||||||| ||| ||||||||||||||||||||||
Sbjct: 106117191 cagtaagaacatggctgcccttgagaaggattatgagtaggttggtgtggattctgttga 106117132
Query: 1427 aagagagggaga 1438
||||||||||
Sbjct: 106117131 gggagagggaga 106117120
Score = 1398 bits (705), Expect = 0.0
Identities = 1173/1332 (88%), Gaps = 39/1332 (2%)
Strand = Plus / Minus
Query: 109 gtgagtgcatctccatccacgttggccaagctggtgtccagatcggcaatgcctgctggg 168
||||||||||||| |||||| ||||||||||||||||||||||| ||| |||||||||||
Sbjct: 105966848 gtgagtgcatctctatccacattggccaagctggtgtccagatcagcagtgcctgctggg 105966789
Query: 169 agctctactgcctggaacacggcatccagcccgatggccagatgccgagtgacaagacca 228
|||| |||||||||||||| ||| || ||| ||||||||
Sbjct: 105966788 agctatactgcctggaaca---------------------gataccaagtaacaagaccc 105966750
Query: 229 ttgggggaggagatgactccttcaacaccttcttca-gtgagacaggcgctggcaagcat 287
||||||||||||||||||||||||||||||||| | |||||| ||| ||||||||||||
Sbjct: 105966749 ctgggggaggagatgactccttcaacaccttctttaagtgagataggagctggcaagcat 105966690
Query: 288 gtgcccagggcagtgtttgtagacctggaacccacagtcattgatgaagttcgcactggc 347
||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 105966689 gtgcccagggcag-gtttgtagacctggaacccacagtcattgatgaagttagcactggc 105966631
Query: 348 acctaccgccagctcttccaccctgagcagctcatcacaggcaaggaagatgctgccaat 407
|||||| ||| ||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 105966630 acctactgcctgctcttccaccctgagcagctcatcacaggcaaaaaagatgctgccaat 105966571
Query: 408 aactatgcccgaggtcactacaccattggcaaggagatcattgacctcgtcttggaccga 467
|||||| || || ||||||| |||||||||||||||||||||||||| ||||||||| |
Sbjct: 105966570 aactattccagaagtcactatcccattggcaaggagatcattgacctcatcttggaccca 105966511
Query: 468 attcggaaactggctgaccagtgcacaggtcttcagggcttcttggttttccacagcttt 527
||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105966510 gttcagaa-ctggctgaccagtgcacaggtcttcagggcttcttggttttccacagcttt 105966452
Query: 528 ggcgggggaa-cgggttctgggttcacctccctgctgatggaacgtctctctgtcgatta 586
|| |||||| | ||||||||||||||||| ||||||||||||||| |||||||||||||
Sbjct: 105966451 ggttggggaaactggttctgggttcacctctctgctgatggaacgtttctctgtcgatta 105966392
Query: 587 tggcaagaagtccaagctggagttctccatttacccagccccccaggtttccacagctgt 646
||| || |||||||||||||| ||||||||||| |||||||| ||||||||||||||||
Sbjct: 105966391 tgggaataagtccaagctggaattctccatttattcagccccctaggtttccacagctgt 105966332
Query: 647 agttgagccctacaactccatcctcaccacccacaccaccctggagcactctgattgtgc 706
|| |||||| |||| |||||||| ||||||||||||||| ||||| |||||||||||||
Sbjct: 105966331 aggtgagccttacatttccatccttaccacccacaccaccgtggagaactctgattgtgc 105966272
Query: 707 cttcatggtagacaatgaggccatctatgacatctgtcgtagaaacctcgatattgaacg 766
||||||||||||||||||||||||||||||||||| || ||||||||| |||||||| |
Sbjct: 105966271 cttcatggtagacaatgaggccatctatgacatctttcatagaaaccttgatattgagca 105966212
Query: 767 cccaacctacactaacctgaataggttgataggtcagattgtgtcctccatcactgcttc 826
|||| ||||||||| ||||| | || | ||||||||||||||||||||||||||
Sbjct: 105966211 cccatcctacactactctgaaccacctcattagccagattgtgtcctccatcactgcttc 105966152
Query: 827 cctgaggtttgatggggccctgaatgttgatctgacagaattccagaccaacctggtgcc 886
|||||||||||||| ||| |||||||||||||||||||||||||||||| | || ||||
Sbjct: 105966151 tctgaggtttgatggagccatgaatgttgatctgacagaattccagaccagcttgttgcc 105966092
Query: 887 ctatccccgcatccatttccctctggccacatatgcccctgtcatctctgctgagaaagc 946
||| || |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105966091 ctactcctgcatccatttccctctggccacatatgcccctgtcatctctgctgagaaagt 105966032
Query: 947 ctaccatgaacagctttctgtagcagagatcaccaatgcttgctttgagccagccaacca 1006
||| |||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 105966031 cta--------------ctgtagcagagatccccaatgcttgctttaggccagccaacca 105965986
Query: 1007 gatggtgaaatgtgaccctcgccatggtaaatacatggcctgctgcctgttgtaccgtgg 1066
||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105965985 gatggtgaaatttgatcctcgccatggtaaatacatggcctgctgcctgttgtaccgtgg 105965926
Query: 1067 tgacgtggttcccaaagacgtcaatgccgccatcgccaccatcaagaccaagcgtaccat 1126
| | ||||||| |||| ||||||||| |||| |||||||| |||||||||| | |||
Sbjct: 105965925 cgtcacggttcccgaagaagtcaatgccaccattgccaccataaagaccaagcacagcat 105965866
Query: 1127 ccagtttgtggactggtgccccactggcttcaaggttggcattaattaccagccccccac 1186
|||||||||||||||||||||| |||||| || | ||||||| || ||||||| |||||
Sbjct: 105965865 tcagtttgtggactggtgccccaatggcttaaaagctggcattgataaccagccacccac 105965806
Query: 1187 tgtggtccccggtggagacctggccaaagtacagcgggcagtgtgcatgctgagcaacac 1246
||||||||| ||||||| ||||| ||||||||| |||| |||||| |||||||||||||
Sbjct: 105965805 tgtggtcccttgtggagatctggcaaaagtacagagggctgtgtgcgtgctgagcaacac 105965746
Query: 1247 cacagccatcgctgaggcctgggctcgcctggaccacaagtttgacctgatgtatgccaa 1306
|||||||||| |||| ||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 105965745 cacagccatcaatgagacctgggctcacctggaccacaagtttgacctgacatatgccaa 105965686
Query: 1307 gcgtgcctttgttcactggtacgtgggtgagggcatggaggaaggagagttttctgaggc 1366
|| ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 105965685 gcatgcctttgttcgctggtacgtggatgagggcatggaggaaggagagttttctgaggc 105965626
Query: 1367 ccgtgaggacatggctgcccttgagaaggattacgaggaggttggtgtggattctgttga 1426
| || || ||||||||||||||||||||||||| ||| ||||||||||||||||||||||
Sbjct: 105965625 cagtaagaacatggctgcccttgagaaggattatgagtaggttggtgtggattctgttga 105965566
Query: 1427 aagagagggaga 1438
||||||||||
Sbjct: 105965565 gggagagggaga 105965554
>Sscrofa_Chr03
|| Length = 144787322
Score = 1138 bits (574), Expect = 0.0
Identities = 781/846 (92%), Gaps = 3/846 (0%)
Strand = Plus / Plus
Query: 597 tccaagctggagttctccatttacccagcccc-ccaggtttccacagctgtagttgagcc 655
|||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 132554009 tccaagctggagctctccatttacccagcccctccaggtttccacagctgtagttgagcc 132554068
Query: 656 ctacaactccatcctcaccacccacaccaccctggagcactctgattgtgccttcatggt 715
|||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 132554069 ctacaactccatcctcaccacccacaccaccctggagcactcaggttgtgccttcatggt 132554128
Query: 716 agacaatgaggccatctatgacatctgtcgtagaaacctcgatattgaacgcccaaccta 775
|| ||| |||||| ||| ||||| |||||||||||||||||||||||| ||||||||||
Sbjct: 132554129 aggcaacgaggccgtctctgacacctgtcgtagaaacctcgatattgagcgcccaacctg 132554188
Query: 776 cactaacctgaataggttgataggtcagattgtgtcctccatcactgcttccctgaggtt 835
|||||| | ||| | | || | |||||||||||||||||| ||||||||||||||||
Sbjct: 132554189 cactaatccgaaccgtcttatcagccagattgtgtcctccatcgctgcttccctgaggtt 132554248
Query: 836 tgatggggccctgaatgttgatctgacagaattccagaccaacctggtgccctatccccg 895
||||||||| ||||||| ||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 132554249 tgatggggctttgaatgtggatctcacagaattccagaccaacctggtgccctacccccg 132554308
Query: 896 catccatttccctctggccacatatgcccctgtcatctctgctgagaaagcctaccatga 955
|||||| ||||||||||||||| ||||||||||||||||||||||||| |||||||| ||
Sbjct: 132554309 catccacttccctctggccacacatgcccctgtcatctctgctgagaa-gcctaccagga 132554367
Query: 956 acagctttctgtagcagagatcaccaatgcttgctttgagccagccaaccagatggtgaa 1015
||||||||||||||||||| || | |||||| |||| | ||||||||||||||||||||
Sbjct: 132554368 acagctttctgtagcagaggtcgctaatgctggcttcaaaccagccaaccagatggtgaa 132554427
Query: 1016 atgtgaccctcgccatggtaaatacatggcctgctgcctgttgtaccgtggtgacgtggt 1075
||| |||||||||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 132554428 atgcaaccctcgccatggtaaatccatggcctgctgcctgttgtaccatggtgacgtggt 132554487
Query: 1076 tcccaaagacgtcaatgccgccatcgccaccatcaagaccaagcgtaccatccagtttgt 1135
||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct: 132554488 tcccaaagacgtcaatgccgccatcgccaccatcaagaccaagcgcagcatccagtttgt 132554547
Query: 1136 ggactggtgccccactggcttcaaggttggcattaattaccag-ccccccactgtggtcc 1194
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 132554548 ggactggtgccccactggcttcaaggttggcattaattaccagcccccccactgtggtct 132554607
Query: 1195 ccggtggagacctggccaaagtacagcgggcagtgtgcatgctgagcaacaccacagcca 1254
| || |||||||||||||||||||||||||| |||||||||||||||| ||| ||||||
Sbjct: 132554608 ctggcggagacctggccaaagtacagcgggctgtgtgcatgctgagcatcactgcagcca 132554667
Query: 1255 tcgctgaggcctgggctcgcctggaccacaagtttgacctgatgtatgccaagcgtgcct 1314
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 132554668 ctgctgaggcctgggctcacctggaccacaagtttgacctgatgtatgccaagcgtgcct 132554727
Query: 1315 ttgttcactggtacgtgggtgagggcatggaggaaggagagttttctgaggcccgtgagg 1374
|| ||||||||| ||||||||||||||||||||||||||||||||||||||| |||| |
Sbjct: 132554728 ctgctcactggtatgtgggtgagggcatggaggaaggagagttttctgaggcctgtgaag 132554787
Query: 1375 acatggctgcccttgagaaggattacgaggaggttggtgtggattctgttgaaagagagg 1434
||||||||||||||||||||||||| |||||||||||| ||||||||||||| || |||
Sbjct: 132554788 acatggctgcccttgagaaggattatgaggaggttggtatggattctgttgagggaaagg 132554847
Query: 1435 gagagg 1440
||||||
Sbjct: 132554848 gagagg 132554853
Score = 842 bits (425), Expect = 0.0
Identities = 874/1018 (85%), Gaps = 18/1018 (1%)
Strand = Plus / Plus
Query: 105 atgcgtgagtgcatctccatccacgttggccaagctggtgtccagatcggcaatgcctgc 164
|||| |||||||||| |||||||||||||||| ||| ||||||||||| ||| ||||||
Sbjct: 49835568 atgcttgagtgcatccccatccacgttggccaggctagtgtccagatcagcagtgcctgt 49835627
Query: 165 tgggagctctactgcctggaacacggcatccagcccgatggccagatgccgagtgacaag 224
|||||| ||| ||||||||||||| ||||||||| ||| |||||||||| |||||||||
Sbjct: 49835628 tgggagttctcctgcctggaacacagcatccagcgtgatagccagatgccaagtgacaag 49835687
Query: 225 accattgggggaggagatgactccttcaacaccttcttcagtgagacaggcgctggcaag 284
||||||| ||||||||||||||||| ||||||||| |||| |||||||
Sbjct: 49835688 tccattgg---aggagatgactccttcagcaccttcttgagtg---------ctggcaaa 49835735
Query: 285 catgtgcccagggcagtgtttgtagacctggaacccacagtcattgatgaagttcgcact 344
| ||||||||||||||||| || ||||||||||| || |||||||||| ||| |||||
Sbjct: 49835736 c--gtgcccagggcagtgttagtcaacctggaaccctcaatcattgatgacgtttgcact 49835793
Query: 345 ggcacctaccgccagctcttccaccctgagcagctcatcacaggcaaggaagatgctgcc 404
||||||||| |||||||| |||||| |||||| |||||||||||||||||||||| | ||
Sbjct: 49835794 ggcacctac-gccagctcctccaccgtgagcatctcatcacaggcaaggaagatggtacc 49835852
Query: 405 aataactatgcccgaggtcactacaccattggcaaggagatcattgacctcgtcttggac 464
||||| | |||| |||||| |||||||||| | ||||||||||||| |||||||||
Sbjct: 49835853 gataaccacgccccgggtcaccacaccattggtactgagatcattgaccgtgtcttggac 49835912
Query: 465 cgaattcggaaactggctgaccagtgcacaggtcttcagggcttcttggttttccacagc 524
| | | ||| ||||||||| ||||||| | || ||||||||||||||||||||||||
Sbjct: 49835913 ccagtgtagaagctggctgactggtgcacatgcctccagggcttcttggttttccacagc 49835972
Query: 525 tttggcgggggaacgggttctgggttcacctccctgctgatggaacgtctctctgtcgat 584
| ||| |||||||| | |||||||||||||| |||||| |||| ||||||||||||||||
Sbjct: 49835973 tctggtgggggaactgattctgggttcaccttcctgcttatgggacgtctctctgtcgat 49836032
Query: 585 tatggcaagaagtccaagctggagttctccatttacccagccccccaggtttccacagct 644
|||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| |||
Sbjct: 49836033 tatggcaagaagtccaagctggaggtctccatttacccagccccccaggtttgcactgct 49836092
Query: 645 gtagttgagccctacaactccatcctcaccacccacaccaccctggagcactctgattgt 704
||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||
Sbjct: 49836093 gtagttgagccctacaactccatcctctccacccacaccacccaggagcactctgattgt 49836152
Query: 705 gccttcatggtagacaatgaggccatctatgacatctgtcgtagaaacctcgatattgaa 764
||||||||||||| | | || ||||||||||||||||| ||||||| | |||||||||
Sbjct: 49836153 gccttcatggtaggccacaagtccatctatgacatctgtggtagaaaacacgatattgag 49836212
Query: 765 cgcccaacctacactaacctgaataggttgataggtcagattgtgtcctccatcactgct 824
||||||||||||||| ||||| | || | | ||||||||||||||||||||||
Sbjct: 49836213 cgcccaacctacactcctctgaacctcgtcattag-ctgattgtgtcctccatcactgct 49836271
Query: 825 tccctgaggtttgatggggccctgaatgttgatctgacagaattccagaccaacctggtg 884
|||||| |||| | ||| |||||||| |||||||||||||||| |||||||| | || ||
Sbjct: 49836272 tccctggggttgggtggagccctgaacgttgatctgacagaatgccagaccaccttgatg 49836331
Query: 885 ccctatccccgcatccatttccctctggccacatatgcccctgtcatctctgctgagaaa 944
|||| || | |||||||||||||||| |||| || | ||||||||||||||||||||||
Sbjct: 49836332 ccctgtcgctgcatccatttccctctttccactta-ggccctgtcatctctgctgagaaa 49836390
Query: 945 gcctaccatgaacagctttctgtagcagagatcaccaatgcttgctttgagccagccaac 1004
||||||||||||||||||||||||||||||||||| |||||||| || ||||||||||||
Sbjct: 49836391 gcctaccatgaacagctttctgtagcagagatcactaatgcttggttagagccagccaac 49836450
Query: 1005 cagatggtgaaatgtgaccctcgccatggtaaatacatggcctgctgcctgttgtaccgt 1064
||||||||||| | ||||||| |||||| ||| ||||||| | |||| || |||| |
Sbjct: 49836451 cagatggtgaagtatgacccttaccatgg-aaacacatggcttactgctggtcgtactgc 49836509
Query: 1065 ggtgacgtggttcccaaagacgtcaatgccgccatcgccaccatcaagaccaagcgta 1122
|| ||| ||||||||||| || |||| |||||||||||| | |||||||||||||
Sbjct: 49836510 accgatgtgattcccaaagacatcgatgctgccatcgccacctttaagaccaagcgta 49836567
Score = 222 bits (112), Expect = 5e-55
Identities = 264/308 (85%), Gaps = 5/308 (1%)
Strand = Plus / Plus
Query: 1110 aagaccaagcgtaccatccagtttgtggactggtgccccactggcttcaaggttggcatt 1169
||||||| ||||| |||||||||||||||||||| ||| ||||||||||| | ||||||
Sbjct: 49836864 aagaccaggcgtagcatccagtttgtggactggtaccctgctggcttcaag-tcggcatt 49836922
Query: 1170 aattaccagccccccactgtggtccccggtggagacctggccaaagtacagcgggcagtg 1229
|||||||||| |||||||||||||| ||||||||||||||| |||||||| |||| |||
Sbjct: 49836923 aattaccagcttcccactgtggtccctggtggagacctggcctaagtacagtgggctgtg 49836982
Query: 1230 tgcatgctgagcaacaccacagccatcgctgaggcctgggctcgcctggaccacaagttt 1289
|||||| |||| ||||||||||| || |||||||| |||| ||||||| | || |||
Sbjct: 49836983 tgcatgttgag-aacaccacagctgtcactgaggcccaggcttgcctggagcccaggttg 49837041
Query: 1290 gacctgatgtatgccaagcgtgcc-tttgttcactggtacgtgggtgagggcatggagga 1348
|||||||||| ||||| | |||| |||||||||| |||| | ||| | |||||||||||
Sbjct: 49837042 gacctgatgtgtgccagtcatgccttttgttcact-gtacataggttaaggcatggagga 49837100
Query: 1349 aggagagttttctgaggcccgtgaggacatggctgcccttgagaaggattacgaggaggt 1408
||||| |||| || ||| || ||||||| |||||| ||||||||||||||| ||||||||
Sbjct: 49837101 aggag-gtttcctcaggtccatgaggacgtggctgtccttgagaaggattatgaggaggt 49837159
Query: 1409 tggtgtgg 1416
||| ||||
Sbjct: 49837160 tggagtgg 49837167
>Sscrofa_Chr11
|| Length = 87690581
Score = 868 bits (438), Expect = 0.0
Identities = 1046/1229 (85%), Gaps = 41/1229 (3%)
Strand = Plus / Plus
Query: 203 tggccagatgccgagtgacaagaccattgggggaggagatgactccttcaacaccttctt 262
|||||||||||| |||||||||||||||| |||| |||||||||||||||| ||||| ||
Sbjct: 32577670 tggccagatgccaagtgacaagaccattgagggaagagatgactccttcaataccttttt 32577729
Query: 263 cagtgaga-caggcg-ctggcaagcatgtgcccagggcagtgtttgtagacctggaaccc 320
|||||||| ||||| ||| | ||||||| |||||||||||||||||||| ||| |||||
Sbjct: 32577730 cagtgagaacaggcaactgaccagcatgtacccagggcagtgtttgtagatctgaaaccc 32577789
Query: 321 acagtcattgatgaagttcgcact--ggcacctaccgccagctcttccaccctgagcagc 378
| | ||||||||||||||| |||| ||||||||| |||||||||||||||||||||||
Sbjct: 32577790 agaatcattgatgaagttcacactttggcacctactcccagctcttccaccctgagcagc 32577849
Query: 379 tcatcacaggcaaggaagatgctgccaataactatgcccgaggtcactacaccattggca 438
|||||||||||||||||||||||| ||||||||||||| ||||||||| |||||||||||
Sbjct: 32577850 tcatcacaggcaaggaagatgctgtcaataactatgcctgaggtcacttcaccattggca 32577909
Query: 439 aggagatcattgacctcgtcttggaccgaattcggaaactggctgaccagtgcacaggtc 498
||||||||||||| || || |||||| ||||| |||||||||||||| |||||| |||||
Sbjct: 32577910 aggagatcattgatcttgtgttggactgaattgggaaactggctgacaagtgcataggtc 32577969
Query: 499 ttcagggcttcttggttttccacagctttggcgggggaacgggttctgggttcacctccc 558
||||| | ||||||| |||| ||||||| | |||| ||| ||| ||||||| |||||||
Sbjct: 32577970 ttcagtgtttcttggctttc-acagctt--gtggggaaactggt-ctgggtttacctccc 32578025
Query: 559 tgctgatggaacgtctctctgtcgattatggcaagaagtccaagctggagttctccattt 618
||| |||| ||| ||||| |||| |||| ||||| || |||| |||||| ||||| ||
Sbjct: 32578026 tgcagatg-aacatctct-tgtcaatta-ggcaaaaa-tcca-gctggaattctctgtt- 32578079
Query: 619 acccagccccccaggtttccacagctgtagttgagccctacaactccatcctcaccaccc 678
||||||||||| ||||||||||||||||| || ||||||| |||||||||||||||||||
Sbjct: 32578080 acccagccccc-aggtttccacagctgtaattaagccctataactccatcctcaccaccc 32578138
Query: 679 acaccaccctggagcactctgattgtgccttcatggtagacaatgaggccatctatgaca 738
|||||||||||||||||| ||||| ||||||||||||||||||| |||||
Sbjct: 32578139 ---------tggagcactctgattgtgtgttcattgtagacaatgaggccatctgtgaca 32578189
Query: 739 tctgtcgtagaaacctcgatattgaacgcccaacctacactaacctgaataggttgatag 798
|||||| |||||||||| || |||| | |||| ||||||||| || || | ||
Sbjct: 32578190 tctgtcatagaaacctcaattttgagcacccagtctacactaatcttaaccaccttatta 32578249
Query: 799 gtcagattgtgtcctccatcactgcttccctgaggtttgatggggccctgaatgttgatc 858
| |||| ||||||||||||||||||||| ||||| |||| || | || ||||||||||
Sbjct: 32578250 gccagactgtgtcctccatcactgcttctctgagctttggtgagacc-tgaatgttgacg 32578308
Query: 859 tgacagaattccagaccaacctggtgccctatccccgcatccatttccctctggccacat 918
|||||||||||| ||||| | || |||||||||||| ||||||||||||| ||| |||||
Sbjct: 32578309 tgacagaattccggaccagcttgttgccctatccccacatccatttccctgtggtcacat 32578368
Query: 919 atgcccctgtcatctctgctgagaaagcctaccatgaacagctttctgtagcagagatca 978
|||||||||||||||||||||| ||| ||||||||| ||||||| || ||||||| ||||
Sbjct: 32578369 atgcccctgtcatctctgctgaaaaa-cctaccatggacagcttgctatagcagaaatca 32578427
Query: 979 ccaatgcttgctttgagccagccaaccagatggtgaaatgtgaccctcgccatggtaaat 1038
| |||||||| |||||||||||||||||||| |||||||||| ||||| ||| | | |||
Sbjct: 32578428 ctaatgcttgttttgagccagccaaccagatagtgaaatgtggccctcaccaag-tgaat 32578486
Query: 1039 acatggcctgctgcctgttgtaccgtggtgacgtggttcccaaagacgtcaatgccgcca 1098
||||||| |||| |||| |||| |||| | || |||| ||||||| ||||||| ||||
Sbjct: 32578487 acatggcttgctacctgctgtatagtggcaatgttgttctcaaagacatcaatgctgcca 32578546
Query: 1099 tcgccaccatcaagaccaagcgtaccatccagtttgtggactggtgccccactggcttca 1158
| ||||||||||||||||| || | ||||||||||||||| ||||| |||||||||||||
Sbjct: 32578547 ttgccaccatcaagaccaatcgcagcatccagtttgtggaatggtgacccactggcttca 32578606
Query: 1159 aggttggcattaattaccagccccccactgtggtccccggtggagacctggccaaagtac 1218
| |||||||||||||||||||| ||| |||||||||| || || |||||||||||||||
Sbjct: 32578607 aagttggcattaattaccagcctccccctgtggtccctggcagatacctggccaaagtac 32578666
Query: 1219 agcgggcagtgtgcatgctgagcaacaccacagccatcgctgaggcctgggctcgcctgg 1278
|| || | |||||| ||||||||||||||||||||||||||||||||||||||| || |
Sbjct: 32578667 agtggtctgtgtgcgtgctgagcaacaccacagccatcgctgaggcctgggctcaccag- 32578725
Query: 1279 accacaagtttgacctgatgtatgccaagc-gtgcctttgttcactggtacgtgggtgag 1337
||||||||||||||||||| ||||||||||||||| ||| |||| ||
Sbjct: 32578726 -----------gacctgatgtatgccaagcagtgcctttgttcacttgtatgtggacaag 32578774
Query: 1338 ggcatggaggaaggagagttttctgaggcccgtgaggacatggctgcccttgagaaggat 1397
|||| |||||||||||||||||||||| ||||||||| |||||||||| ||| ||
Sbjct: 32578775 ggcacaaaggaaggagagttttctgaggctcgtgaggaccctgctgcccttgggaa-aat 32578833
Query: 1398 tacgaggaggttggtgtggattctgttga 1426
|| ||| |||||| ||||| ||||||||
Sbjct: 32578834 tatgagtaggttgaggtggaatctgttga 32578862
>Sscrofa_Chr15
|| Length = 157681621
Score = 769 bits (388), Expect = 0.0
Identities = 793/928 (85%)
Strand = Plus / Minus
Query: 481 ctgaccagtgcacaggtcttcagggcttcttggttttccacagctttggcgggggaacgg 540
|||| ||||||||||| |||||||||||| |||| |||||||||||||| || || || |
Sbjct: 134326171 ctgatcagtgcacaggacttcagggcttcctggtgttccacagctttggaggcggcaccg 134326112
Query: 541 gttctgggttcacctccctgctgatggaacgtctctctgtcgattatggcaagaagtcca 600
| ||||| |||||||| || |||||||| | |||||||| || || |||||||| ||||
Sbjct: 134326111 gctctggcttcacctcgctcctgatggagaggctctctgttgactacggcaagaaatcca 134326052
Query: 601 agctggagttctccatttacccagccccccaggtttccacagctgtagttgagccctaca 660
|||| ||||||||||| ||||| ||||| ||||| |||||||| || || ||||||||||
Sbjct: 134326051 agctcgagttctccatctaccccgccccgcaggtgtccacagccgtggtcgagccctaca 134325992
Query: 661 actccatcctcaccacccacaccaccctggagcactctgattgtgccttcatggtagaca 720
|||||||||| |||||||||||||||||||||||||| || |||||||||||||| ||||
Sbjct: 134325991 actccatcctgaccacccacaccaccctggagcactcagactgtgccttcatggtggaca 134325932
Query: 721 atgaggccatctatgacatctgtcgtagaaacctcgatattgaacgcccaacctacacta 780
| || ||||| || |||||||| || | ||||| || || || || || |||||||| |
Sbjct: 134325931 acgaagccatttacgacatctgccgccgcaacctggacatcgagcgtcccacctacacca 134325872
Query: 781 acctgaataggttgataggtcagattgtgtcctccatcactgcttccctgaggtttgatg 840
|||| || | | || | || || || ||||||||||| || |||||| | ||||| |
Sbjct: 134325871 acctcaaccgcctcatcagccaaatcgtctcctccatcacagcgtccctgcgctttgacg 134325812
Query: 841 gggccctgaatgttgatctgacagaattccagaccaacctggtgccctatccccgcatcc 900
||||||| || || || ||||| || ||||||||||||||||||||||| || |||||||
Sbjct: 134325811 gggccctcaacgtggacctgacggagttccagaccaacctggtgccctaccctcgcatcc 134325752
Query: 901 atttccctctggccacatatgcccctgtcatctctgctgagaaagcctaccatgaacagc 960
| ||||| |||||||| ||||| || ||||||||||| ||||| |||||||| || ||||
Sbjct: 134325751 acttcccgctggccacctatgcaccagtcatctctgcagagaaggcctaccacgagcagc 134325692
Query: 961 tttctgtagcagagatcaccaatgcttgctttgagccagccaaccagatggtgaaatgtg 1020
| || || |||||||||||||| || ||||| ||||| ||||||||||||||||| ||||
Sbjct: 134325691 tgtcggtggcagagatcaccaacgcctgcttcgagcctgccaaccagatggtgaagtgtg 134325632
Query: 1021 accctcgccatggtaaatacatggcctgctgcctgttgtaccgtggtgacgtggttccca 1080
| || || ||||| || |||||||||||||||||| ||||||| || |||||||| ||||
Sbjct: 134325631 atccccgtcatggcaagtacatggcctgctgcctgctgtaccgaggagacgtggtgccca 134325572
Query: 1081 aagacgtcaatgccgccatcgccaccatcaagaccaagcgtaccatccagtttgtggact 1140
| || ||||||||||||||||| |||||||||||||||| | ||||||||||||||||
Sbjct: 134325571 aggatgtcaatgccgccatcgctgccatcaagaccaagcgcagtatccagtttgtggact 134325512
Query: 1141 ggtgccccactggcttcaaggttggcattaattaccagccccccactgtggtccccggtg 1200
|||||||||| |||||||||||||| || || |||||||||||||| || || ||||| |
Sbjct: 134325511 ggtgccccacgggcttcaaggttggtatcaactaccagccccccaccgtagtgcccgggg 134325452
Query: 1201 gagacctggccaaagtacagcgggcagtgtgcatgctgagcaacaccacagccatcgctg 1260
| ||||||||||| || ||||| || |||||||||||||||||||| || |||||||| |
Sbjct: 134325451 gtgacctggccaaggtgcagcgtgccgtgtgcatgctgagcaacacgaccgccatcgccg 134325392
Query: 1261 aggcctgggctcgcctggaccacaagtttgacctgatgtatgccaagcgtgcctttgttc 1320
|||||||||| ||||| ||||||||||| |||||||||||||||||| | || ||||| |
Sbjct: 134325391 aggcctgggcccgcctagaccacaagttcgacctgatgtatgccaagagggcgtttgtgc 134325332
Query: 1321 actggtacgtgggtgagggcatggaggaaggagagttttctgaggcccgtgaggacatgg 1380
||||||||||||| |||||||||||||| || ||||| ||||||||||| ||||| ||||
Sbjct: 134325331 actggtacgtgggcgagggcatggaggagggcgagttctctgaggcccgggaggatatgg 134325272
Query: 1381 ctgcccttgagaaggattacgaggaggt 1408
||||||| ||||||||||| ||||||||
Sbjct: 134325271 ctgccctggagaaggattatgaggaggt 134325244
Score = 765 bits (386), Expect = 0.0
Identities = 794/930 (85%)
Strand = Plus / Plus
Query: 479 ggctgaccagtgcacaggtcttcagggcttcttggttttccacagctttggcgggggaac 538
|||||||||||||||||| || || || ||| | | |||||||||||||| || || ||
Sbjct: 134346378 ggctgaccagtgcacaggactccaaggattcctcatcttccacagctttggaggcggcac 134346437
Query: 539 gggttctgggttcacctccctgctgatggaacgtctctctgtcgattatggcaagaagtc 598
|| ||||| |||||||| || |||||||| || |||||||| || || |||||||| ||
Sbjct: 134346438 cggctctggcttcacctcgctcctgatggagcggctctctgttgactacggcaagaaatc 134346497
Query: 599 caagctggagttctccatttacccagccccccaggtttccacagctgtagttgagcccta 658
|||||| ||||||||||| ||||| ||||| ||||| |||||||| || || ||||||||
Sbjct: 134346498 caagctcgagttctccatctaccctgccccgcaggtgtccacagccgtggtcgagcccta 134346557
Query: 659 caactccatcctcaccacccacaccaccctggagcactctgattgtgccttcatggtaga 718
|||||||||||| |||||||||||||||||||||||||| || |||||||||||||| ||
Sbjct: 134346558 caactccatcctgaccacccacaccaccctggagcactcagactgtgccttcatggtgga 134346617
Query: 719 caatgaggccatctatgacatctgtcgtagaaacctcgatattgaacgcccaacctacac 778
||| || |||||||| |||||||| || | ||||| || || || || || ||||||||
Sbjct: 134346618 caacgaagccatctacgacatctgccgccgcaacctggacatcgagcgtcccacctacac 134346677
Query: 779 taacctgaataggttgataggtcagattgtgtcctccatcactgcttccctgaggtttga 838
||||| || | | || || || || || ||||||||||| || |||||| | |||||
Sbjct: 134346678 caacctcaaccgcctcatcggccaaatcgtctcctccatcacagcgtccctgcgctttga 134346737
Query: 839 tggggccctgaatgttgatctgacagaattccagaccaacctggtgccctatccccgcat 898
||||||||| || || || ||||| || ||||||||||||||||||||||| || |||||
Sbjct: 134346738 tggggccctcaacgtggacctgacggagttccagaccaacctggtgccctaccctcgcat 134346797
Query: 899 ccatttccctctggccacatatgcccctgtcatctctgctgagaaagcctaccatgaaca 958
||| ||||| |||||||| ||||| || ||||||||||| ||||| |||||||| || ||
Sbjct: 134346798 ccacttccccctggccacctatgcaccagtcatctctgcagagaaggcctaccacgagca 134346857
Query: 959 gctttctgtagcagagatcaccaatgcttgctttgagccagccaaccagatggtgaaatg 1018
||| || || |||||||||||||| || ||||| ||||| ||||||||||||||||| ||
Sbjct: 134346858 gctgtcggtggcagagatcaccaacgcctgcttcgagcctgccaaccagatggtgaagtg 134346917
Query: 1019 tgaccctcgccatggtaaatacatggcctgctgcctgttgtaccgtggtgacgtggttcc 1078
||| || || ||||| || |||||||||||||||||| ||||||| || |||||||| ||
Sbjct: 134346918 tgatccccgtcatggcaagtacatggcctgctgcctgctgtaccgaggagacgtggtgcc 134346977
Query: 1079 caaagacgtcaatgccgccatcgccaccatcaagaccaagcgtaccatccagtttgtgga 1138
||| || ||||||||||||||||| |||||||||||||||| | ||||||||||||||
Sbjct: 134346978 caaggatgtcaatgccgccatcgctgccatcaagaccaagcgcagtatccagtttgtgga 134347037
Query: 1139 ctggtgccccactggcttcaaggttggcattaattaccagccccccactgtggtccccgg 1198
|||||||||||| |||||||||||||| || || |||||||||||||| || || ||| |
Sbjct: 134347038 ctggtgccccacgggcttcaaggttggtatcaactaccagccccccaccgtagtgcccag 134347097
Query: 1199 tggagacctggccaaagtacagcgggcagtgtgcatgctgagcaacaccacagccatcgc 1258
|| ||||||||||| || ||||| || |||||||||||||||||||| || ||||||||
Sbjct: 134347098 gggtgacctggccaaggtgcagcgtgccgtgtgcatgctgagcaacacgaccgccatcgc 134347157
Query: 1259 tgaggcctgggctcgcctggaccacaagtttgacctgatgtatgccaagcgtgcctttgt 1318
||||||||||| ||||| ||||||||||| |||||||||||||||||| | || |||||
Sbjct: 134347158 cgaggcctgggcccgcctagaccacaagttcgacctgatgtatgccaagagggcgtttgt 134347217
Query: 1319 tcactggtacgtgggtgagggcatggaggaaggagagttttctgaggcccgtgaggacat 1378
|||||||||||||| |||||||||||||| || ||||| ||||||||||| ||||| ||
Sbjct: 134347218 gcactggtacgtgggcgagggcatggaggagggcgagttctctgaggcccgggaggatat 134347277
Query: 1379 ggctgcccttgagaaggattacgaggaggt 1408
||||||||| ||||||||||| ||||||||
Sbjct: 134347278 ggctgccctggagaaggattatgaggaggt 134347307
Score = 208 bits (105), Expect = 7e-51
Identities = 177/201 (88%)
Strand = Plus / Minus
Query: 107 gcgtgagtgcatctccatccacgttggccaagctggtgtccagatcggcaatgcctgctg 166
|||||| |||||||| |||| ||||| || || ||||||||||| ||||||||||||||
Sbjct: 134327107 gcgtgaatgcatctcagtccatgttgggcaggcaggtgtccagatgggcaatgcctgctg 134327048
Query: 167 ggagctctactgcctggaacacggcatccagcccgatggccagatgccgagtgacaagac 226
|||||||||||| |||||||| || |||||||| ||||| |||||||| |||||||||||
Sbjct: 134327047 ggagctctactgtctggaacatgggatccagccggatgggcagatgcccagtgacaagac 134326988
Query: 227 cattgggggaggagatgactccttcaacaccttcttcagtgagacaggcgctggcaagca 286
|||||| |||||||| |||||||||| |||||||||| |||| || || ||||| |||||
Sbjct: 134326987 cattggtggaggagacgactccttcaccaccttcttctgtgaaactggtgctggaaagca 134326928
Query: 287 tgtgcccagggcagtgtttgt 307
||||||| ||||||| |||||
Sbjct: 134326927 tgtgccccgggcagtttttgt 134326907
Score = 184 bits (93), Expect = 1e-43
Identities = 174/201 (86%)
Strand = Plus / Plus
Query: 107 gcgtgagtgcatctccatccacgttggccaagctggtgtccagatcggcaatgcctgctg 166
||||||||||||||| ||||||| ||||| || ||||| ||||| ||||||||||||||
Sbjct: 134344993 gcgtgagtgcatctcagtccacgtgggccaggccggtgtgcagattggcaatgcctgctg 134345052
Query: 167 ggagctctactgcctggaacacggcatccagcccgatggccagatgccgagtgacaagac 226
||||||||||||| ||||||| || |||||||| ||||| |||||||| || ||||||||
Sbjct: 134345053 ggagctctactgcttggaacatgggatccagccagatgggcagatgcccagcgacaagac 134345112
Query: 227 cattgggggaggagatgactccttcaacaccttcttcagtgagacaggcgctggcaagca 286
||| || ||||| || ||||||||||| || ||||| || || || ||||| || |||||
Sbjct: 134345113 catcggaggaggggacgactccttcaatacgttctttagcgaaactggcgccggaaagca 134345172
Query: 287 tgtgcccagggcagtgtttgt 307
||||||| |||||||||||||
Sbjct: 134345173 tgtgccccgggcagtgtttgt 134345193
Score = 172 bits (87), Expect = 4e-40
Identities = 135/151 (89%)
Strand = Plus / Plus
Query: 330 gatgaagttcgcactggcacctaccgccagctcttccaccctgagcagctcatcacaggc 389
||||| ||||| || ||||| ||||||||||||||||| || |||||||||||||| ||
Sbjct: 134345531 gatgaggttcggacgggcacgtaccgccagctcttccatccggagcagctcatcactggg 134345590
Query: 390 aaggaagatgctgccaataactatgcccgaggtcactacaccattggcaaggagatcatt 449
||||||||||| |||||||||||||||||||| |||||||||||||| |||||| |||||
Sbjct: 134345591 aaggaagatgcggccaataactatgcccgaggccactacaccattggaaaggagctcatt 134345650
Query: 450 gacctcgtcttggaccgaattcggaaactgg 480
||||| || |||||||||||||||| ||||
Sbjct: 134345651 gacctggtgctggaccgaattcggaagctgg 134345681
Score = 125 bits (63), Expect = 8e-26
Identities = 111/126 (88%), Gaps = 2/126 (1%)
Strand = Plus / Minus
Query: 1309 gtgcctttgttcactggtacgtgggtgagggcatggaggaaggagagttttctgaggccc 1368
|||| |||||||||||| || ||| |||| ||||||||||| ||||||||||||| |||
Sbjct: 64385992 gtgcttttgttcactggcacatggctgagagcatggaggaa--agagttttctgagcccc 64385935
Query: 1369 gtgaggacatggctgcccttgagaaggattacgaggaggttggtgtggattctgttgaaa 1428
||| |||||| ||||||||||||||||||| || ||| ||||| |||||||||||||||
Sbjct: 64385934 atgaagacatgactgcccttgagaaggattatgaagagattggtatggattctgttgaaa 64385875
Query: 1429 gagagg 1434
||||||
Sbjct: 64385874 gagagg 64385869
Score = 125 bits (63), Expect = 8e-26
Identities = 111/126 (88%), Gaps = 2/126 (1%)
Strand = Plus / Plus
Query: 1309 gtgcctttgttcactggtacgtgggtgagggcatggaggaaggagagttttctgaggccc 1368
|||| |||||||||||| || ||| |||| ||||||||||| ||||||||||||| |||
Sbjct: 64513538 gtgcttttgttcactggcacatggctgagagcatggaggaa--agagttttctgagcccc 64513595
Query: 1369 gtgaggacatggctgcccttgagaaggattacgaggaggttggtgtggattctgttgaaa 1428
||| |||||| ||||||||||||||||||| || ||| ||||| |||||||||||||||
Sbjct: 64513596 atgaagacatgactgcccttgagaaggattatgaagagattggtatggattctgttgaaa 64513655
Query: 1429 gagagg 1434
||||||
Sbjct: 64513656 gagagg 64513661
Score = 107 bits (54), Expect = 2e-20
Identities = 96/110 (87%)
Strand = Plus / Minus
Query: 344 tggcacctaccgccagctcttccaccctgagcagctcatcacaggcaaggaagatgctgc 403
|||| ||||||| |||||||||||||| |||||||||||||| || || || ||||| ||
Sbjct: 134326557 tggcccctaccggcagctcttccacccagagcagctcatcactgggaaagaggatgcggc 134326498
Query: 404 caataactatgcccgaggtcactacaccattggcaaggagatcattgacc 453
|| ||||||||||| |||||||||||||| |||||||| || |||||||
Sbjct: 134326497 taacaactatgcccgtggtcactacaccatcggcaaggaaattattgacc 134326448
>Sscrofa_Chr14
|| Length = 153851969
Score = 515 bits (260), Expect = e-143
Identities = 575/680 (84%)
Strand = Plus / Minus
Query: 483 gaccagtgcacaggtcttcagggcttcttggttttccacagctttggcgggggaacgggt 542
|||| |||||| || || ||||||||| | | |||||||||||||| || || || ||
Sbjct: 54046279 gacctgtgcacggggctgcagggcttcctcatcttccacagctttgggggcggcaccggc 54046220
Query: 543 tctgggttcacctccctgctgatggaacgtctctctgtcgattatggcaagaagtccaag 602
|| || ||| | || ||||| ||||| || ||||| || || || |||||||||||||||
Sbjct: 54046219 tcgggcttcgcatctctgctcatggagcggctctcggtggactacggcaagaagtccaag 54046160
Query: 603 ctggagttctccatttacccagccccccaggtttccacagctgtagttgagccctacaac 662
||||||||| |||||||||| ||||||||||| ||||| || || || ||||||||||||
Sbjct: 54046159 ctggagttcgccatttacccggccccccaggtctccacggccgtggtggagccctacaac 54046100
Query: 663 tccatcctcaccacccacaccaccctggagcactctgattgtgccttcatggtagacaat 722
|||||||| ||||| ||||| |||||||||||||| || || ||||||||||| |||||
Sbjct: 54046099 tccatcctgaccacgcacacgaccctggagcactcggactgcgccttcatggtggacaac 54046040
Query: 723 gaggccatctatgacatctgtcgtagaaacctcgatattgaacgcccaacctacactaac 782
||||||||||| ||||||||||| | ||||| || || || || || |||||||| |||
Sbjct: 54046039 gaggccatctacgacatctgtcggcgcaacctggacatcgagcggcccacctacaccaac 54045980
Query: 783 ctgaataggttgataggtcagattgtgtcctccatcactgcttccctgaggtttgatggg 842
|| ||| | |||| || ||||| |||||||||||||| || |||||| | || || |||
Sbjct: 54045979 ctcaatcgtctgatcgggcagatcgtgtcctccatcacagcctccctgcgcttcgacggg 54045920
Query: 843 gccctgaatgttgatctgacagaattccagaccaacctggtgccctatccccgcatccat 902
||||| || || || ||||| || ||||||||||||||||| ||||| |||||||||||
Sbjct: 54045919 gccctcaacgtggacctgacggagttccagaccaacctggtcccctacccccgcatccac 54045860
Query: 903 ttccctctggccacatatgcccctgtcatctctgctgagaaagcctaccatgaacagctt 962
||||| |||||||| || ||||| |||||||| || ||||| |||||||| || |||||
Sbjct: 54045859 ttccccctggccacctacgccccggtcatctcggccgagaaggcctaccacgagcagctg 54045800
Query: 963 tctgtagcagagatcaccaatgcttgctttgagccagccaaccagatggtgaaatgtgac 1022
||||| || ||||||||||| || ||||| ||||| |||||||||||||| || ||||||
Sbjct: 54045799 tctgtggccgagatcaccaacgcctgcttcgagccggccaaccagatggtcaagtgtgac 54045740
Query: 1023 cctcgccatggtaaatacatggcctgctgcctgttgtaccgtggtgacgtggttcccaaa 1082
|||||||| || || ||||||||||||||| || ||||| | || |||||||| ||||||
Sbjct: 54045739 cctcgccacggcaagtacatggcctgctgcatgctgtacaggggagacgtggtccccaaa 54045680
Query: 1083 gacgtcaatgccgccatcgccaccatcaagaccaagcgtaccatccagtttgtggactgg 1142
|||||||| || |||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 54045679 gacgtcaacgcggccatcgccaccatcaagaccaagcgcaccatccagtttgtggactgg 54045620
Query: 1143 tgccccactggcttcaaggt 1162
||||| ||||| ||||||||
Sbjct: 54045619 tgcccgactgggttcaaggt 54045600
Score = 515 bits (260), Expect = e-143
Identities = 575/680 (84%)
Strand = Plus / Plus
Query: 483 gaccagtgcacaggtcttcagggcttcttggttttccacagctttggcgggggaacgggt 542
|||| |||||| || || ||||||||| | | |||||||||||||| || || || ||
Sbjct: 54217763 gacctgtgcacggggctgcagggcttcctcatcttccacagctttgggggcggcaccggc 54217822
Query: 543 tctgggttcacctccctgctgatggaacgtctctctgtcgattatggcaagaagtccaag 602
|| || ||| | || ||||| ||||| || ||||| || || || |||||||||||||||
Sbjct: 54217823 tcgggcttcgcatctctgctcatggagcggctctcggtggactacggcaagaagtccaag 54217882
Query: 603 ctggagttctccatttacccagccccccaggtttccacagctgtagttgagccctacaac 662
||||||||| |||||||||| ||||||||||| ||||| || || || ||||||||||||
Sbjct: 54217883 ctggagttcgccatttacccggccccccaggtctccacggccgtggtggagccctacaac 54217942
Query: 663 tccatcctcaccacccacaccaccctggagcactctgattgtgccttcatggtagacaat 722
|||||||| ||||| ||||| |||||||||||||| || || ||||||||||| |||||
Sbjct: 54217943 tccatcctgaccacgcacacgaccctggagcactcggactgcgccttcatggtggacaac 54218002
Query: 723 gaggccatctatgacatctgtcgtagaaacctcgatattgaacgcccaacctacactaac 782
||||||||||| ||||||||||| | ||||| || || || || || |||||||| |||
Sbjct: 54218003 gaggccatctacgacatctgtcggcgcaacctggacatcgagcggcccacctacaccaac 54218062
Query: 783 ctgaataggttgataggtcagattgtgtcctccatcactgcttccctgaggtttgatggg 842
|| ||| | |||| || ||||| |||||||||||||| || |||||| | || || |||
Sbjct: 54218063 ctcaatcgtctgatcgggcagatcgtgtcctccatcacagcctccctgcgcttcgacggg 54218122
Query: 843 gccctgaatgttgatctgacagaattccagaccaacctggtgccctatccccgcatccat 902
||||| || || || ||||| || ||||||||||||||||| ||||| |||||||||||
Sbjct: 54218123 gccctcaacgtggacctgacggagttccagaccaacctggtcccctacccccgcatccac 54218182
Query: 903 ttccctctggccacatatgcccctgtcatctctgctgagaaagcctaccatgaacagctt 962
||||| |||||||| || ||||| |||||||| || ||||| |||||||| || |||||
Sbjct: 54218183 ttccccctggccacctacgccccggtcatctcggccgagaaggcctaccacgagcagctg 54218242
Query: 963 tctgtagcagagatcaccaatgcttgctttgagccagccaaccagatggtgaaatgtgac 1022
||||| || ||||||||||| || ||||| ||||| |||||||||||||| || ||||||
Sbjct: 54218243 tctgtggccgagatcaccaacgcctgcttcgagccggccaaccagatggtcaagtgtgac 54218302
Query: 1023 cctcgccatggtaaatacatggcctgctgcctgttgtaccgtggtgacgtggttcccaaa 1082
|||||||| || || ||||||||||||||| || ||||| | || |||||||| ||||||
Sbjct: 54218303 cctcgccacggcaagtacatggcctgctgcatgctgtacaggggagacgtggtccccaaa 54218362
Query: 1083 gacgtcaatgccgccatcgccaccatcaagaccaagcgtaccatccagtttgtggactgg 1142
|||||||| || |||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 54218363 gacgtcaacgcggccatcgccaccatcaagaccaagcgcaccatccagtttgtggactgg 54218422
Query: 1143 tgccccactggcttcaaggt 1162
||||| ||||| ||||||||
Sbjct: 54218423 tgcccgactgggttcaaggt 54218442
Score = 260 bits (131), Expect = 2e-66
Identities = 227/259 (87%)
Strand = Plus / Minus
Query: 1159 aggttggcattaattaccagccccccactgtggtccccggtggagacctggccaaagtac 1218
|||| ||||| || |||||||||||||| |||||||| || |||||||||||||| || |
Sbjct: 54043229 aggtgggcatcaactaccagccccccacggtggtcccagggggagacctggccaaggtgc 54043170
Query: 1219 agcgggcagtgtgcatgctgagcaacaccacagccatcgctgaggcctgggctcgcctgg 1278
||||||| ||||||||||||||||||||||| |||||||| ||||||||||| |||||||
Sbjct: 54043169 agcgggccgtgtgcatgctgagcaacaccacggccatcgccgaggcctgggcccgcctgg 54043110
Query: 1279 accacaagtttgacctgatgtatgccaagcgtgcctttgttcactggtacgtgggtgagg 1338
|||||||||| ||||| ||||| |||||||||||||| || |||||||||||||| || |
Sbjct: 54043109 accacaagttcgacctcatgtacgccaagcgtgccttcgtgcactggtacgtgggggaag 54043050
Query: 1339 gcatggaggaaggagagttttctgaggcccgtgaggacatggctgcccttgagaaggatt 1398
|||||||||| || ||||| || |||||||| |||||| |||| || || ||||| ||||
Sbjct: 54043049 gcatggaggagggcgagttctcggaggcccgggaggacctggcggctctggagaaagatt 54042990
Query: 1399 acgaggaggttggtgtgga 1417
|||| ||||| || |||||
Sbjct: 54042989 acgaagaggtgggcgtgga 54042971
Score = 252 bits (127), Expect = 5e-64
Identities = 226/259 (87%)
Strand = Plus / Plus
Query: 1159 aggttggcattaattaccagccccccactgtggtccccggtggagacctggccaaagtac 1218
|||| ||||| || |||||||||||||| |||||||| || |||||||||||||| || |
Sbjct: 54220385 aggtaggcatcaactaccagccccccacggtggtcccagggggagacctggccaaggtgc 54220444
Query: 1219 agcgggcagtgtgcatgctgagcaacaccacagccatcgctgaggcctgggctcgcctgg 1278
||||||| ||||||||||||||||||||||| |||||||| ||||||||||| |||||||
Sbjct: 54220445 agcgggccgtgtgcatgctgagcaacaccacggccatcgccgaggcctgggcccgcctgg 54220504
Query: 1279 accacaagtttgacctgatgtatgccaagcgtgcctttgttcactggtacgtgggtgagg 1338
|||||||||| ||||| |||||||||||||||||||| || |||||||||||||| || |
Sbjct: 54220505 accacaagttcgacctcatgtatgccaagcgtgccttcgtgcactggtacgtgggggaag 54220564
Query: 1339 gcatggaggaaggagagttttctgaggcccgtgaggacatggctgcccttgagaaggatt 1398
||||||| || || ||||| || |||||| | |||||| |||| || || ||||| ||||
Sbjct: 54220565 gcatggaagagggcgagttctcggaggccagggaggacctggcggctctggagaaagatt 54220624
Query: 1399 acgaggaggttggtgtgga 1417
|||| ||||| || |||||
Sbjct: 54220625 acgaagaggtgggcgtgga 54220643
Score = 182 bits (92), Expect = 4e-43
Identities = 182/212 (85%)
Strand = Plus / Minus
Query: 111 gagtgcatctccatccacgttggccaagctggtgtccagatcggcaatgcctgctgggag 170
||||||||||| |||||||| || || || || || ||||||||||||||||||||||||
Sbjct: 54047701 gagtgcatctctatccacgtggggcaggcaggggttcagatcggcaatgcctgctgggag 54047642
Query: 171 ctctactgcctggaacacggcatccagcccgatggccagatgccgagtgacaagaccatt 230
|| |||||||| ||||| || || ||||||||||| |||||||| |||||||| |||||
Sbjct: 54047641 ctgtactgccttgaacatggaattcagcccgatggtcagatgcccagtgacaaaaccatc 54047582
Query: 231 gggggaggagatgactccttcaacaccttcttcagtgagacaggcgctggcaagcatgtg 290
|| || || || ||||| |||||||| |||||||||||||| || || |||||||| |||
Sbjct: 54047581 ggcggtggggacgactcgttcaacacgttcttcagtgagactggggccggcaagcacgtg 54047522
Query: 291 cccagggcagtgtttgtagacctggaacccac 322
||||| || |||||||| |||||||| |||||
Sbjct: 54047521 cccagagccgtgtttgtggacctggagcccac 54047490
Score = 182 bits (92), Expect = 4e-43
Identities = 182/212 (85%)
Strand = Plus / Plus
Query: 111 gagtgcatctccatccacgttggccaagctggtgtccagatcggcaatgcctgctgggag 170
||||||||||| |||||||| || || || || || ||||||||||||||||||||||||
Sbjct: 54216341 gagtgcatctctatccacgtggggcaggcaggggttcagatcggcaatgcctgctgggag 54216400
Query: 171 ctctactgcctggaacacggcatccagcccgatggccagatgccgagtgacaagaccatt 230
|| |||||||| ||||| || || ||||||||||| |||||||| |||||||| |||||
Sbjct: 54216401 ctgtactgccttgaacatggaattcagcccgatggtcagatgcccagtgacaaaaccatc 54216460
Query: 231 gggggaggagatgactccttcaacaccttcttcagtgagacaggcgctggcaagcatgtg 290
|| || || || ||||| |||||||| |||||||||||||| || || |||||||| |||
Sbjct: 54216461 ggcggtggggacgactcgttcaacacgttcttcagtgagactggggccggcaagcacgtg 54216520
Query: 291 cccagggcagtgtttgtagacctggaacccac 322
||||| || |||||||| |||||||| |||||
Sbjct: 54216521 cccagagctgtgtttgtggacctggagcccac 54216552
Score = 95.6 bits (48), Expect = 7e-17
Identities = 99/116 (85%)
Strand = Plus / Minus
Query: 330 gatgaagttcgcactggcacctaccgccagctcttccaccctgagcagctcatcacaggc 389
|||||||| ||||| || |||||| | |||||||||||||| |||||||| ||||| ||
Sbjct: 54046693 gatgaagtgcgcacggggacctacaggcagctcttccacccggagcagctgatcaccggg 54046634
Query: 390 aaggaagatgctgccaataactatgcccgaggtcactacaccattggcaaggagat 445
|||||||| || ||||| || || ||| |||| ||||||||||| |||||||||||
Sbjct: 54046633 aaggaagacgcagccaacaattacgccagaggccactacaccatcggcaaggagat 54046578
Score = 95.6 bits (48), Expect = 7e-17
Identities = 99/116 (85%)
Strand = Plus / Plus
Query: 330 gatgaagttcgcactggcacctaccgccagctcttccaccctgagcagctcatcacaggc 389
|||||||| ||||| || |||||| | |||||||||||||| |||||||| ||||| ||
Sbjct: 54217349 gatgaagtgcgcacggggacctacaggcagctcttccacccggagcagctgatcaccggg 54217408
Query: 390 aaggaagatgctgccaataactatgcccgaggtcactacaccattggcaaggagat 445
|||||||| || ||||| || || ||| |||| ||||||||||| |||||||||||
Sbjct: 54217409 aaggaagacgcagccaacaattacgccagaggccactacaccatcggcaaggagat 54217464
Score = 77.8 bits (39), Expect = 2e-11
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 1331 gggtgagggcatggaggaaggagagttttctgaggcccgtgaggacatggctgcccttg 1389
|||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 25285605 gggtgagggcatggtggaaggagagttccttgaggcctgtgaggacatggctgcccttg 25285663
>gb|GL895007.2| Sus scrofa unplaced genomic scaffold ChrUScaf2891
Length = 58772
Score = 424 bits (214), Expect = e-116
Identities = 550/662 (83%)
Strand = Plus / Minus
Query: 501 cagggcttcttggttttccacagctttggcgggggaacgggttctgggttcacctccctg 560
||||||||| || | |||||||| ||||| ||||| || || ||||| ||||| || |||
Sbjct: 17341 cagggcttcctgatcttccacagttttggggggggcaccggctctggcttcacttctctg 17282
Query: 561 ctgatggaacgtctctctgtcgattatggcaagaagtccaagctggagttctccatttac 620
||||||||||| ||||| | ||||| ||||||||||||||||| ||||| |||| |||
Sbjct: 17281 ctgatggaacgcctctccctggattacggcaagaagtccaagctagagtttgccatctac 17222
Query: 621 ccagccccccaggtttccacagctgtagttgagccctacaactccatcctcaccacccac 680
|| || |||||||| ||||| || || || || ||||||||||||||||| |||||||||
Sbjct: 17221 ccggcaccccaggtctccacggccgtggtggaaccctacaactccatcctgaccacccac 17162
Query: 681 accaccctggagcactctgattgtgccttcatggtagacaatgaggccatctatgacatc 740
||||||||||| || || || ||||||||||||| ||||| ||||||||||| ||||||
Sbjct: 17161 accaccctggaacattcagaaagtgccttcatggtggacaacgaggccatctacgacatc 17102
Query: 741 tgtcgtagaaacctcgatattgaacgcccaacctacactaacctgaataggttgataggt 800
|| || || ||||| || || || ||||| |||||||| ||||| || | | || |
Sbjct: 17101 tgccgcaggaacctggacatcgagcgccccacctacaccaacctcaaccgcctcatcagc 17042
Query: 801 cagattgtgtcctccatcactgcttccctgaggtttgatggggccctgaatgttgatctg 860
||||| |||||||||||||| || |||||| | |||||||||||||| || || || |||
Sbjct: 17041 cagatcgtgtcctccatcaccgcctccctgcgctttgatggggccctcaacgtggacctg 16982
Query: 861 acagaattccagaccaacctggtgccctatccccgcatccatttccctctggccacatat 920
|| || ||||||||||||||||||||||| ||||||||||| ||||| |||| ||| ||
Sbjct: 16981 accgagttccagaccaacctggtgccctacccccgcatccacttccccctggtcacctac 16922
Query: 921 gcccctgtcatctctgctgagaaagcctaccatgaacagctttctgtagcagagatcacc 980
|| || |||||||||||||||| |||||||| || ||||| ||||| || |||||||||
Sbjct: 16921 gcacccatcatctctgctgagaaggcctaccacgagcagctctctgtggctgagatcacc 16862
Query: 981 aatgcttgctttgagccagccaaccagatggtgaaatgtgaccctcgccatggtaaatac 1040
| | ||||||||||| || |||||||||||| ||||| || || ||||| || |||
Sbjct: 16861 agctcctgctttgagcccaacagccagatggtgaagtgtgatccccgtcatggcaagtac 16802
Query: 1041 atggcctgctgcctgttgtaccgtggtgacgtggttcccaaagacgtcaatgccgccatc 1100
|||||||||||| || | ||||| || |||||||| ||||| |||||||| | ||||||
Sbjct: 16801 atggcctgctgcatgctctaccggggggacgtggtgcccaaggacgtcaacgtcgccatt 16742
Query: 1101 gccaccatcaagaccaagcgtaccatccagtttgtggactggtgccccactggcttcaag 1160
|| |||||||||||||| | |||||||||||||| |||||||| ||||| |||||||||
Sbjct: 16741 gctgccatcaagaccaagaggaccatccagtttgtagactggtgtcccacaggcttcaag 16682
Query: 1161 gt 1162
||
Sbjct: 16681 gt 16680
Score = 206 bits (104), Expect = 3e-50
Identities = 155/172 (90%)
Strand = Plus / Minus
Query: 1234 tgctgagcaacaccacagccatcgctgaggcctgggctcgcctggaccacaagtttgacc 1293
|||||||||||||||| |||||||| ||||||||||| ||||||||||||||||| ||||
Sbjct: 13597 tgctgagcaacaccacggccatcgcggaggcctgggcccgcctggaccacaagttcgacc 13538
Query: 1294 tgatgtatgccaagcgtgcctttgttcactggtacgtgggtgagggcatggaggaaggag 1353
||||||| |||||||||||||| || |||||||| || || ||||| ||||| |||||||
Sbjct: 13537 tgatgtacgccaagcgtgccttcgtgcactggtatgtcggagaggggatggaagaaggag 13478
Query: 1354 agttttctgaggcccgtgaggacatggctgcccttgagaaggattacgagga 1405
| |||||||||||||| |||||| |||||||||| ||||||||||| |||||
Sbjct: 13477 aattttctgaggcccgggaggacctggctgccctggagaaggattatgagga 13426
Score = 89.7 bits (45), Expect = 4e-15
Identities = 84/97 (86%)
Strand = Plus / Minus
Query: 348 acctaccgccagctcttccaccctgagcagctcatcacaggcaaggaagatgctgccaat 407
|||||||||||||||||||| || |||||||| |||||||| || || ||||| |||||
Sbjct: 19380 acctaccgccagctcttccatccagagcagctgatcacaggaaaagaggatgcagccaac 19321
Query: 408 aactatgcccgaggtcactacaccattggcaaggaga 444
||||||||||| || |||||||| | ||||||||||
Sbjct: 19320 aactatgcccggggccactacacagtgggcaaggaga 19284
>gb|GL895352.1| Sus scrofa unplaced genomic scaffold chrU_scaffold3926
Length = 32274
Score = 194 bits (98), Expect = 1e-46
Identities = 132/142 (92%), Gaps = 1/142 (0%)
Strand = Plus / Plus
Query: 105 atgcgtgagtgcatctccatccacgttggccaagctggtgtccagatcggcaatgcctgc 164
|||| |||||||||||||||||||| ||||||||| |||||||| | |||| |||||||
Sbjct: 7333 atgcatgagtgcatctccatccacgctggccaagcctgtgtccaggttggcagtgcctgc 7392
Query: 165 tgggagctctactgcctggaacacggcatccagcccgatggccagatgccgagtgacaag 224
||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 7393 tgggagctctactgcctggaacacggcatccagcctgatggccagatgcc-agtgacaag 7451
Query: 225 accattgggggaggagatgact 246
|| |||||||||||||||||||
Sbjct: 7452 actattgggggaggagatgact 7473
>Sscrofa_Chr08
|| Length = 148491826
Score = 119 bits (60), Expect = 5e-24
Identities = 90/100 (90%)
Strand = Plus / Plus
Query: 1276 tggaccacaagtttgacctgatgtatgccaagcgtgcctttgttcactggtacgtgggtg 1335
|||||||||| ||||||||||| |||||||||| ||||| |||||||||||| |||||||
Sbjct: 60848335 tggaccacaactttgacctgatatatgccaagcctgcctctgttcactggtatgtgggtg 60848394
Query: 1336 agggcatggaggaaggagagttttctgaggcccgtgagga 1375
||||| |||||||||||||| ||||| ||||| ||||||
Sbjct: 60848395 agggcgtggaggaaggagagacttctggggcccatgagga 60848434
>Sscrofa_Chr10
|| Length = 79102373
Score = 103 bits (52), Expect = 3e-19
Identities = 142/172 (82%)
Strand = Plus / Minus
Query: 1128 cagtttgtggactggtgccccactggcttcaaggttggcattaattaccagccccccact 1187
|||||||| || ||||| ||||||||||||||||| ||||| ||| || |||||||
Sbjct: 71596456 cagtttgtagattggtgtcccactggcttcaaggtgggcatcaatggtcatccccccagg 71596397
Query: 1188 gtggtccccggtggagacctggccaaagtacagcgggcagtgtgcatgctgagcaacacc 1247
| ||| || || || ||||||||| | | |||||||| || ||||||||||||||||||
Sbjct: 71596396 gcggtgccaggaggggacctggccgaggcccagcgggctgtctgcatgctgagcaacacc 71596337
Query: 1248 acagccatcgctgaggcctgggctcgcctggaccacaagtttgacctgatgt 1299
|| || |||| ||||||||||| ||||||| ||||||||| ||||| ||||
Sbjct: 71596336 acggcggtcgcggaggcctgggcccgcctgggccacaagttcgacctcatgt 71596285
Score = 103 bits (52), Expect = 3e-19
Identities = 142/172 (82%)
Strand = Plus / Plus
Query: 1128 cagtttgtggactggtgccccactggcttcaaggttggcattaattaccagccccccact 1187
|||||||| || ||||| ||||||||||||||||| ||||| ||| || |||||||
Sbjct: 71672445 cagtttgtagattggtgtcccactggcttcaaggtgggcatcaatggtcatccccccagg 71672504
Query: 1188 gtggtccccggtggagacctggccaaagtacagcgggcagtgtgcatgctgagcaacacc 1247
| ||| || || || ||||||||| | | |||||||| || ||||||||||||||||||
Sbjct: 71672505 gcggtgccaggaggggacctggccgaggcccagcgggctgtctgcatgctgagcaacacc 71672564
Query: 1248 acagccatcgctgaggcctgggctcgcctggaccacaagtttgacctgatgt 1299
|| || |||| ||||||||||| ||||||| ||||||||| ||||| ||||
Sbjct: 71672565 acggcggtcgcggaggcctgggcccgcctgggccacaagttcgacctcatgt 71672616
Score = 65.9 bits (33), Expect = 6e-08
Identities = 111/137 (81%)
Strand = Plus / Minus
Query: 603 ctggagttctccatttacccagccccccaggtttccacagctgtagttgagccctacaac 662
|||||||||||| | |||||||||||| | | ||||| || || || ||||| || |||
Sbjct: 71596981 ctggagttctccgtctacccagcccccaggatctccactgccgtggtggagccttataac 71596922
Query: 663 tccatcctcaccacccacaccaccctggagcactctgattgtgccttcatggtagacaat 722
||| |||| ||||| ||| ||||| | |||||||| || || ||||| || | ||||||
Sbjct: 71596921 tccgtccttaccacacaccccaccatagagcactcagactgcaccttcctgctggacaat 71596862
Query: 723 gaggccatctatgacat 739
|||||| ||||||||||
Sbjct: 71596861 gaggccgtctatgacat 71596845
Score = 65.9 bits (33), Expect = 6e-08
Identities = 111/137 (81%)
Strand = Plus / Plus
Query: 603 ctggagttctccatttacccagccccccaggtttccacagctgtagttgagccctacaac 662
|||||||||||| | |||||||||||| | | ||||| || || || ||||| || |||
Sbjct: 71671920 ctggagttctccgtctacccagcccccaggatctccactgccgtggtggagccttataac 71671979
Query: 663 tccatcctcaccacccacaccaccctggagcactctgattgtgccttcatggtagacaat 722
||| |||| ||||| ||| ||||| | |||||||| || || ||||| || | ||||||
Sbjct: 71671980 tccgtccttaccacacaccccaccatagagcactcagactgcaccttcctgctggacaat 71672039
Query: 723 gaggccatctatgacat 739
|||||| ||||||||||
Sbjct: 71672040 gaggccgtctatgacat 71672056
Score = 63.9 bits (32), Expect = 3e-07
Identities = 65/76 (85%)
Strand = Plus / Minus
Query: 124 tccacgttggccaagctggtgtccagatcggcaatgcctgctgggagctctactgcctgg 183
||||| ||||||||||||| |||||||| || |||| || ||||| ||||| |||||||
Sbjct: 71599685 tccacattggccaagctggcgtccagattggggatgcttgttgggaactctattgcctgg 71599626
Query: 184 aacacggcatccagcc 199
|||| || ||||||||
Sbjct: 71599625 aacatgggatccagcc 71599610
Score = 63.9 bits (32), Expect = 3e-07
Identities = 65/76 (85%)
Strand = Plus / Plus
Query: 124 tccacgttggccaagctggtgtccagatcggcaatgcctgctgggagctctactgcctgg 183
||||| ||||||||||||| |||||||| || |||| || ||||| ||||| |||||||
Sbjct: 71669216 tccacattggccaagctggcgtccagattggggatgcttgttgggaactctattgcctgg 71669275
Query: 184 aacacggcatccagcc 199
|||| || ||||||||
Sbjct: 71669276 aacatgggatccagcc 71669291
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 43,830,697
Number of extensions: 413
Number of successful extensions: 413
Number of sequences better than 1.0e-05: 10
Number of HSP's gapped: 381
Number of HSP's successfully gapped: 73
Length of query: 1593
Length of database: 2,808,509,378
Length adjustment: 22
Effective length of query: 1571
Effective length of database: 2,808,408,574
Effective search space: 4412009869754
Effective search space used: 4412009869754
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)