Animal-Genome cDNA 20110601C-000464


Search to RefSeqBP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-000464
         (1593 letters)

Database: RefSeq49_BP.fasta 
           33,088 sequences; 17,681,374 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001159977.1| tubulin alpha-1B chain [Bos taurus].              874   0.0  
Alignment   gi|NP_001039875.1| tubulin alpha-1D chain [Bos taurus].              871   0.0  
Alignment   gi|NP_001108328.1| tubulin alpha-1B chain [Bos taurus].              870   0.0  
Alignment   gi|XP_002694727.1| PREDICTED: GL12416-like [Bos taurus].             867   0.0  
Alignment   gi|XP_002701788.1| PREDICTED: GL12416-like [Bos taurus].             867   0.0  
Alignment   gi|NP_001029376.1| tubulin alpha-1C chain [Bos taurus].              865   0.0  
Alignment   gi|NP_001033252.1| tubulin alpha-3 chain [Bos taurus].               865   0.0  
Alignment   gi|XP_001790595.1| PREDICTED: tubulin alpha-1C chain-like [Bos ...   862   0.0  
Alignment   gi|XP_001254236.1| PREDICTED: tubulin alpha-1C chain-like isofo...   862   0.0  
Alignment   gi|XP_002685663.1| PREDICTED: tubulin alpha-1C chain-like [Bos ...   860   0.0  

>ref|NP_001159977.1| tubulin alpha-1B chain [Bos taurus].
          Length = 451

 Score =  874 bits (2258), Expect = 0.0
 Identities = 428/440 (97%), Positives = 428/440 (97%)
 Frame = +3

Query: 105  MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 284
            MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
Sbjct: 1    MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60

Query: 285  HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 464
            HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
Sbjct: 61   HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 120

Query: 465  RIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTA 644
            RIRKLADQCTGLQGFLVFH            LLMERLSVDYGKKSKLEFSIYPAPQVSTA
Sbjct: 121  RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 180

Query: 645  VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 824
            VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
Sbjct: 181  VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 240

Query: 825  SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 1004
            SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
Sbjct: 241  SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 300

Query: 1005 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 1184
            QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
Sbjct: 301  QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 360

Query: 1185 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 1364
            TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361  TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420

Query: 1365 AREDMAALEKDYEEVGVDSV 1424
            AREDMAALEKDYEEVGVDSV
Sbjct: 421  AREDMAALEKDYEEVGVDSV 440


>ref|NP_001039875.1| tubulin alpha-1D chain [Bos taurus].
          Length = 452

 Score =  871 bits (2251), Expect = 0.0
 Identities = 424/440 (96%), Positives = 428/440 (97%)
 Frame = +3

Query: 105  MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 284
            MRECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
Sbjct: 1    MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60

Query: 285  HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 464
            HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKE+IDLVLD
Sbjct: 61   HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKELIDLVLD 120

Query: 465  RIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTA 644
            RIRKLADQCTGLQGFL+FH            LLMERLSVDYGKKSKLEFSIYPAPQVSTA
Sbjct: 121  RIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 180

Query: 645  VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 824
            VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
Sbjct: 181  VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 240

Query: 825  SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 1004
            SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
Sbjct: 241  SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 300

Query: 1005 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 1184
            QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
Sbjct: 301  QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 360

Query: 1185 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 1364
            TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361  TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420

Query: 1365 AREDMAALEKDYEEVGVDSV 1424
            AREDMAALEKDYEEVG+DSV
Sbjct: 421  AREDMAALEKDYEEVGMDSV 440


>ref|NP_001108328.1| tubulin alpha-1B chain [Bos taurus].
          Length = 451

 Score =  870 bits (2248), Expect = 0.0
 Identities = 426/440 (96%), Positives = 427/440 (97%)
 Frame = +3

Query: 105  MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 284
            MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
Sbjct: 1    MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60

Query: 285  HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 464
            HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
Sbjct: 61   HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 120

Query: 465  RIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTA 644
            RIRKLADQCTGLQGFLVFH            LLMERLSVDYGKKSKLEFSIYPAPQVSTA
Sbjct: 121  RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 180

Query: 645  VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 824
            VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLI QIVSSITA
Sbjct: 181  VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA 240

Query: 825  SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 1004
            SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
Sbjct: 241  SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 300

Query: 1005 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 1184
            QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKR+IQFVDWCPTGFKVGINYQPP
Sbjct: 301  QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPP 360

Query: 1185 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 1364
            TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361  TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420

Query: 1365 AREDMAALEKDYEEVGVDSV 1424
            AREDMAALEKDYEEVGVDSV
Sbjct: 421  AREDMAALEKDYEEVGVDSV 440


>ref|XP_002694727.1| PREDICTED: GL12416-like [Bos taurus].
          Length = 450

 Score =  867 bits (2240), Expect = 0.0
 Identities = 421/440 (95%), Positives = 427/440 (97%)
 Frame = +3

Query: 105  MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 284
            MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
Sbjct: 1    MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60

Query: 285  HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 464
            HVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI+DLVLD
Sbjct: 61   HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 120

Query: 465  RIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTA 644
            RIRKLAD CTGLQGFL+FH            LLMERLSVDYGKKSKLEF+IYPAPQVSTA
Sbjct: 121  RIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTA 180

Query: 645  VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 824
            VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
Sbjct: 181  VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 240

Query: 825  SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 1004
            SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
Sbjct: 241  SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 300

Query: 1005 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 1184
            QMVKCDPRHGKYMACC+LYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
Sbjct: 301  QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 360

Query: 1185 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 1364
            TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361  TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420

Query: 1365 AREDMAALEKDYEEVGVDSV 1424
            ARED+AALEKDYEEVGVDSV
Sbjct: 421  AREDLAALEKDYEEVGVDSV 440


>ref|XP_002701788.1| PREDICTED: GL12416-like [Bos taurus].
          Length = 450

 Score =  867 bits (2240), Expect = 0.0
 Identities = 421/440 (95%), Positives = 427/440 (97%)
 Frame = +3

Query: 105  MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 284
            MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
Sbjct: 1    MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60

Query: 285  HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 464
            HVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI+DLVLD
Sbjct: 61   HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 120

Query: 465  RIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTA 644
            RIRKLAD CTGLQGFL+FH            LLMERLSVDYGKKSKLEF+IYPAPQVSTA
Sbjct: 121  RIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTA 180

Query: 645  VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 824
            VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
Sbjct: 181  VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 240

Query: 825  SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 1004
            SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
Sbjct: 241  SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 300

Query: 1005 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 1184
            QMVKCDPRHGKYMACC+LYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
Sbjct: 301  QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 360

Query: 1185 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 1364
            TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361  TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420

Query: 1365 AREDMAALEKDYEEVGVDSV 1424
            ARED+AALEKDYEEVGVDSV
Sbjct: 421  AREDLAALEKDYEEVGVDSV 440


>ref|NP_001029376.1| tubulin alpha-1C chain [Bos taurus].
          Length = 449

 Score =  865 bits (2235), Expect = 0.0
 Identities = 421/439 (95%), Positives = 425/439 (96%)
 Frame = +3

Query: 105  MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 284
            MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
Sbjct: 1    MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60

Query: 285  HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 464
            HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLI+GKEDAANNYARGHYTIGKEIIDLVLD
Sbjct: 61   HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNYARGHYTIGKEIIDLVLD 120

Query: 465  RIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTA 644
            R+RKLADQCTGLQGFLVFH            LLMERLSVDYGKKSKLEFSIYPAPQVSTA
Sbjct: 121  RVRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 180

Query: 645  VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 824
            VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRL+ QIVSSITA
Sbjct: 181  VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLMSQIVSSITA 240

Query: 825  SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 1004
            SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
Sbjct: 241  SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 300

Query: 1005 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 1184
            QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
Sbjct: 301  QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 360

Query: 1185 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 1364
            TVVPGGDLAKVQRAVCMLSNTTA+AEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361  TVVPGGDLAKVQRAVCMLSNTTAVAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420

Query: 1365 AREDMAALEKDYEEVGVDS 1421
            AREDMAALEKDYEEVG DS
Sbjct: 421  AREDMAALEKDYEEVGADS 439


>ref|NP_001033252.1| tubulin alpha-3 chain [Bos taurus].
          Length = 450

 Score =  865 bits (2234), Expect = 0.0
 Identities = 420/440 (95%), Positives = 426/440 (96%)
 Frame = +3

Query: 105  MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 284
            MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
Sbjct: 1    MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60

Query: 285  HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 464
            HVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI+DLVLD
Sbjct: 61   HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 120

Query: 465  RIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTA 644
            RIRKLAD CTGLQGFL+FH            LLMERLSVDYGKKSKLEF+IYPAPQVSTA
Sbjct: 121  RIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTA 180

Query: 645  VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 824
            VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
Sbjct: 181  VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 240

Query: 825  SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 1004
            SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
Sbjct: 241  SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 300

Query: 1005 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 1184
            QMVKCDPRHGKYMACC+LYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
Sbjct: 301  QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 360

Query: 1185 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 1364
            TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHK DLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361  TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKLDLMYAKRAFVHWYVGEGMEEGEFSE 420

Query: 1365 AREDMAALEKDYEEVGVDSV 1424
            ARED+AALEKDYEEVGVDSV
Sbjct: 421  AREDLAALEKDYEEVGVDSV 440


>ref|XP_001790595.1| PREDICTED: tubulin alpha-1C chain-like [Bos taurus].
          Length = 449

 Score =  862 bits (2227), Expect = 0.0
 Identities = 420/439 (95%), Positives = 424/439 (96%)
 Frame = +3

Query: 105  MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 284
            MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
Sbjct: 1    MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60

Query: 285  HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 464
            HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLI+GKEDAANNYARGHYTIGKEIIDLVLD
Sbjct: 61   HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNYARGHYTIGKEIIDLVLD 120

Query: 465  RIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTA 644
            R+RKLADQCTGLQGFLVFH            LLMERLSVDYGKKSKLEFSIYPAPQVSTA
Sbjct: 121  RVRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 180

Query: 645  VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 824
            VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTY NLNRL+ QIVSSITA
Sbjct: 181  VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYMNLNRLMSQIVSSITA 240

Query: 825  SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 1004
            SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
Sbjct: 241  SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 300

Query: 1005 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 1184
            QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
Sbjct: 301  QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 360

Query: 1185 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 1364
            TVVPGGDLAKV+RAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361  TVVPGGDLAKVERAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420

Query: 1365 AREDMAALEKDYEEVGVDS 1421
            AREDMAALEKDYEEVG DS
Sbjct: 421  AREDMAALEKDYEEVGADS 439


>ref|XP_001254236.1| PREDICTED: tubulin alpha-1C chain-like isoform 1 [Bos taurus].
          Length = 449

 Score =  862 bits (2227), Expect = 0.0
 Identities = 420/439 (95%), Positives = 424/439 (96%)
 Frame = +3

Query: 105  MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 284
            MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
Sbjct: 1    MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60

Query: 285  HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 464
            HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLI+GKEDAANNYARGHYTIGKEIIDLVLD
Sbjct: 61   HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNYARGHYTIGKEIIDLVLD 120

Query: 465  RIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTA 644
            R+RKLADQCTGLQGFLVFH            LLMERLSVDYGKKSKLEFSIYPAPQVSTA
Sbjct: 121  RVRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 180

Query: 645  VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 824
            VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTY NLNRL+ QIVSSITA
Sbjct: 181  VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYMNLNRLMSQIVSSITA 240

Query: 825  SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 1004
            SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
Sbjct: 241  SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 300

Query: 1005 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 1184
            QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
Sbjct: 301  QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 360

Query: 1185 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 1364
            TVVPGGDLAKV+RAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361  TVVPGGDLAKVERAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420

Query: 1365 AREDMAALEKDYEEVGVDS 1421
            AREDMAALEKDYEEVG DS
Sbjct: 421  AREDMAALEKDYEEVGADS 439


>ref|XP_002685663.1| PREDICTED: tubulin alpha-1C chain-like [Bos taurus].
          Length = 449

 Score =  860 bits (2221), Expect = 0.0
 Identities = 418/439 (95%), Positives = 424/439 (96%)
 Frame = +3

Query: 105  MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 284
            MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
Sbjct: 1    MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60

Query: 285  HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 464
            HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLI+GKEDAANNYARGHYTIGKEIIDLVLD
Sbjct: 61   HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNYARGHYTIGKEIIDLVLD 120

Query: 465  RIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTA 644
            R+RKLADQCTGLQGFLVFH            LLMERLSVDYGKKSKLEFSIYPAPQVSTA
Sbjct: 121  RVRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 180

Query: 645  VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 824
            VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNL+IERPTYTNLNRL+ QIVSSITA
Sbjct: 181  VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLNIERPTYTNLNRLMSQIVSSITA 240

Query: 825  SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 1004
            SLRFDGALNVDLTEFQTNLVPYPR HFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
Sbjct: 241  SLRFDGALNVDLTEFQTNLVPYPRTHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 300

Query: 1005 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 1184
            QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKT+RTIQFVDWCPTGFKVGINYQPP
Sbjct: 301  QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTERTIQFVDWCPTGFKVGINYQPP 360

Query: 1185 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 1364
            TVVPGGDLAKVQRAVCMLSNTTA+AEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361  TVVPGGDLAKVQRAVCMLSNTTAVAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420

Query: 1365 AREDMAALEKDYEEVGVDS 1421
            AREDMAALEKDYEEVG DS
Sbjct: 421  AREDMAALEKDYEEVGADS 439


  Database: RefSeq49_BP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 17,681,374
  Number of sequences in database:  33,088
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 62,227,734
Number of extensions: 1794653
Number of successful extensions: 7347
Number of sequences better than 1.0e-05: 35
Number of HSP's gapped: 7199
Number of HSP's successfully gapped: 42
Length of query: 531
Length of database: 17,681,374
Length adjustment: 107
Effective length of query: 424
Effective length of database: 14,140,958
Effective search space: 5995766192
Effective search space used: 5995766192
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

Search to RefSeqCP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-000464
         (1593 letters)

Database: RefSeq49_CP.fasta 
           33,336 sequences; 18,874,504 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_862547.1| PREDICTED: similar to tubulin, alpha 1 isoform ...   874   0.0  
Alignment   gi|XP_862523.1| PREDICTED: similar to tubulin, alpha 1 isoform ...   874   0.0  
Alignment   gi|XP_534814.1| PREDICTED: similar to tubulin, alpha 1 isoform ...   874   0.0  
Alignment   gi|XP_851095.1| PREDICTED: similar to Tubulin alpha-2 chain (Al...   868   0.0  
Alignment   gi|XP_849904.1| PREDICTED: similar to Tubulin alpha-3 chain (Al...   867   0.0  
Alignment   gi|XP_534765.2| PREDICTED: similar to Tubulin alpha-3 chain (Al...   867   0.0  
Alignment   gi|XP_850665.1| PREDICTED: similar to Tubulin alpha-2 chain (Al...   866   0.0  
Alignment   gi|XP_853268.1| PREDICTED: similar to Tubulin alpha-2 chain (Al...   863   0.0  
Alignment   gi|XP_862332.1| PREDICTED: similar to tubulin, alpha 1 isoform ...   852   0.0  
Alignment   gi|XP_536077.2| PREDICTED: similar to Tubulin alpha-4 chain (Al...   852   0.0  

>ref|XP_862547.1| PREDICTED: similar to tubulin, alpha 1 isoform 13 [Canis familiaris].
          Length = 451

 Score =  874 bits (2258), Expect = 0.0
 Identities = 428/440 (97%), Positives = 428/440 (97%)
 Frame = +3

Query: 105  MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 284
            MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
Sbjct: 1    MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60

Query: 285  HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 464
            HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
Sbjct: 61   HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 120

Query: 465  RIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTA 644
            RIRKLADQCTGLQGFLVFH            LLMERLSVDYGKKSKLEFSIYPAPQVSTA
Sbjct: 121  RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 180

Query: 645  VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 824
            VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
Sbjct: 181  VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 240

Query: 825  SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 1004
            SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
Sbjct: 241  SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 300

Query: 1005 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 1184
            QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
Sbjct: 301  QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 360

Query: 1185 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 1364
            TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361  TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420

Query: 1365 AREDMAALEKDYEEVGVDSV 1424
            AREDMAALEKDYEEVGVDSV
Sbjct: 421  AREDMAALEKDYEEVGVDSV 440


>ref|XP_862523.1| PREDICTED: similar to tubulin, alpha 1 isoform 12 [Canis familiaris].
          Length = 451

 Score =  874 bits (2258), Expect = 0.0
 Identities = 428/440 (97%), Positives = 428/440 (97%)
 Frame = +3

Query: 105  MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 284
            MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
Sbjct: 1    MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60

Query: 285  HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 464
            HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
Sbjct: 61   HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 120

Query: 465  RIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTA 644
            RIRKLADQCTGLQGFLVFH            LLMERLSVDYGKKSKLEFSIYPAPQVSTA
Sbjct: 121  RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 180

Query: 645  VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 824
            VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
Sbjct: 181  VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 240

Query: 825  SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 1004
            SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
Sbjct: 241  SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 300

Query: 1005 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 1184
            QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
Sbjct: 301  QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 360

Query: 1185 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 1364
            TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361  TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420

Query: 1365 AREDMAALEKDYEEVGVDSV 1424
            AREDMAALEKDYEEVGVDSV
Sbjct: 421  AREDMAALEKDYEEVGVDSV 440


>ref|XP_534814.1| PREDICTED: similar to tubulin, alpha 1 isoform 1 [Canis familiaris].
          Length = 451

 Score =  874 bits (2258), Expect = 0.0
 Identities = 428/440 (97%), Positives = 428/440 (97%)
 Frame = +3

Query: 105  MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 284
            MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
Sbjct: 1    MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60

Query: 285  HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 464
            HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
Sbjct: 61   HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 120

Query: 465  RIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTA 644
            RIRKLADQCTGLQGFLVFH            LLMERLSVDYGKKSKLEFSIYPAPQVSTA
Sbjct: 121  RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 180

Query: 645  VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 824
            VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
Sbjct: 181  VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 240

Query: 825  SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 1004
            SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
Sbjct: 241  SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 300

Query: 1005 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 1184
            QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
Sbjct: 301  QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 360

Query: 1185 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 1364
            TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361  TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420

Query: 1365 AREDMAALEKDYEEVGVDSV 1424
            AREDMAALEKDYEEVGVDSV
Sbjct: 421  AREDMAALEKDYEEVGVDSV 440


>ref|XP_851095.1| PREDICTED: similar to Tubulin alpha-2 chain (Alpha-tubulin 2) [Canis
            familiaris].
          Length = 518

 Score =  868 bits (2243), Expect = 0.0
 Identities = 425/439 (96%), Positives = 426/439 (97%)
 Frame = +3

Query: 108  RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 287
            RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH
Sbjct: 69   RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 128

Query: 288  VPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDR 467
            VPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDR
Sbjct: 129  VPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDR 188

Query: 468  IRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTAV 647
            IRKLADQCTGLQGFLVFH            LLMERLSVDYGKKSKLEFSIYPAPQVSTAV
Sbjct: 189  IRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAV 248

Query: 648  VEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITAS 827
            VEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLI QIVSSITAS
Sbjct: 249  VEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITAS 308

Query: 828  LRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQ 1007
            LRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQ
Sbjct: 309  LRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQ 368

Query: 1008 MVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPT 1187
            MVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKR+IQFVDWCPTGFKVGINYQPPT
Sbjct: 369  MVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPT 428

Query: 1188 VVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEA 1367
            VVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEA
Sbjct: 429  VVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEA 488

Query: 1368 REDMAALEKDYEEVGVDSV 1424
            REDMAALEKDYEEVGVDSV
Sbjct: 489  REDMAALEKDYEEVGVDSV 507


>ref|XP_849904.1| PREDICTED: similar to Tubulin alpha-3 chain (Alpha-tubulin 3) isoform
            1 [Canis familiaris].
          Length = 450

 Score =  867 bits (2240), Expect = 0.0
 Identities = 421/440 (95%), Positives = 427/440 (97%)
 Frame = +3

Query: 105  MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 284
            MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
Sbjct: 1    MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60

Query: 285  HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 464
            HVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI+DLVLD
Sbjct: 61   HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 120

Query: 465  RIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTA 644
            RIRKLAD CTGLQGFL+FH            LLMERLSVDYGKKSKLEF+IYPAPQVSTA
Sbjct: 121  RIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTA 180

Query: 645  VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 824
            VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
Sbjct: 181  VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 240

Query: 825  SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 1004
            SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
Sbjct: 241  SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 300

Query: 1005 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 1184
            QMVKCDPRHGKYMACC+LYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
Sbjct: 301  QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 360

Query: 1185 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 1364
            TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361  TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420

Query: 1365 AREDMAALEKDYEEVGVDSV 1424
            ARED+AALEKDYEEVGVDSV
Sbjct: 421  AREDLAALEKDYEEVGVDSV 440


>ref|XP_534765.2| PREDICTED: similar to Tubulin alpha-3 chain (Alpha-tubulin 3) [Canis
            familiaris].
          Length = 450

 Score =  867 bits (2239), Expect = 0.0
 Identities = 420/440 (95%), Positives = 427/440 (97%)
 Frame = +3

Query: 105  MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 284
            MRECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
Sbjct: 1    MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60

Query: 285  HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 464
            HVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI+DLVLD
Sbjct: 61   HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 120

Query: 465  RIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTA 644
            RIRKLAD CTGLQGFL+FH            LLMERLSVDYGKKSKLEF+IYPAPQVSTA
Sbjct: 121  RIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTA 180

Query: 645  VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 824
            VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
Sbjct: 181  VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 240

Query: 825  SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 1004
            SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
Sbjct: 241  SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 300

Query: 1005 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 1184
            QMVKCDPRHGKYMACC+LYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
Sbjct: 301  QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 360

Query: 1185 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 1364
            TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361  TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420

Query: 1365 AREDMAALEKDYEEVGVDSV 1424
            ARED+AALEKDYEEVGVDSV
Sbjct: 421  AREDLAALEKDYEEVGVDSV 440


>ref|XP_850665.1| PREDICTED: similar to Tubulin alpha-2 chain (Alpha-tubulin 2) isoform
            2 [Canis familiaris].
          Length = 449

 Score =  866 bits (2237), Expect = 0.0
 Identities = 423/439 (96%), Positives = 425/439 (96%)
 Frame = +3

Query: 105  MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 284
            MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
Sbjct: 1    MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60

Query: 285  HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 464
            HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
Sbjct: 61   HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 120

Query: 465  RIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTA 644
            RIRKLADQCTGLQGFLVFH            LLMERLSVDYGKKSKLEFSIYPAPQVSTA
Sbjct: 121  RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 180

Query: 645  VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 824
            VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLI QIVSSITA
Sbjct: 181  VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA 240

Query: 825  SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 1004
            SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQL+VAEITNACFEPAN
Sbjct: 241  SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNACFEPAN 300

Query: 1005 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 1184
            QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKR+IQFVDWCPTGFKVGINYQPP
Sbjct: 301  QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPP 360

Query: 1185 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 1364
            TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361  TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420

Query: 1365 AREDMAALEKDYEEVGVDS 1421
            AREDMAALEKDYEEVG DS
Sbjct: 421  AREDMAALEKDYEEVGADS 439


>ref|XP_853268.1| PREDICTED: similar to Tubulin alpha-2 chain (Alpha-tubulin 2) [Canis
            familiaris].
          Length = 460

 Score =  863 bits (2231), Expect = 0.0
 Identities = 420/439 (95%), Positives = 425/439 (96%)
 Frame = +3

Query: 108  RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 287
            RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH
Sbjct: 11   RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 70

Query: 288  VPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDR 467
            VPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKE+IDLVLDR
Sbjct: 71   VPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKELIDLVLDR 130

Query: 468  IRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTAV 647
            IRKLADQCTGLQGFL+FH            LLMERLSVDYGKKSKLEFSIYPAPQVSTAV
Sbjct: 131  IRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAV 190

Query: 648  VEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITAS 827
            VEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLI QIVSSITAS
Sbjct: 191  VEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITAS 250

Query: 828  LRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQ 1007
            LRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQ
Sbjct: 251  LRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQ 310

Query: 1008 MVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPT 1187
            MVKCDPRHGKYMACCLLYRGDVVPKDVNAAIA IKTKR+IQFVDWCPTGFKVGINYQPPT
Sbjct: 311  MVKCDPRHGKYMACCLLYRGDVVPKDVNAAIAAIKTKRSIQFVDWCPTGFKVGINYQPPT 370

Query: 1188 VVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEA 1367
            VVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEA
Sbjct: 371  VVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEA 430

Query: 1368 REDMAALEKDYEEVGVDSV 1424
            REDMAALEKDYEEVG+DSV
Sbjct: 431  REDMAALEKDYEEVGMDSV 449


>ref|XP_862332.1| PREDICTED: similar to tubulin, alpha 1 isoform 5 [Canis familiaris].
          Length = 443

 Score =  852 bits (2202), Expect = 0.0
 Identities = 420/440 (95%), Positives = 420/440 (95%)
 Frame = +3

Query: 105  MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 284
            MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
Sbjct: 1    MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60

Query: 285  HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 464
            HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDL   
Sbjct: 61   HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDL--- 117

Query: 465  RIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTA 644
                 ADQCTGLQGFLVFH            LLMERLSVDYGKKSKLEFSIYPAPQVSTA
Sbjct: 118  -----ADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 172

Query: 645  VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 824
            VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
Sbjct: 173  VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 232

Query: 825  SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 1004
            SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
Sbjct: 233  SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 292

Query: 1005 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 1184
            QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
Sbjct: 293  QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 352

Query: 1185 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 1364
            TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 353  TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 412

Query: 1365 AREDMAALEKDYEEVGVDSV 1424
            AREDMAALEKDYEEVGVDSV
Sbjct: 413  AREDMAALEKDYEEVGVDSV 432


>ref|XP_536077.2| PREDICTED: similar to Tubulin alpha-4 chain (Alpha-tubulin 4)
            (Alpha-tubulin isotype M-alpha-4) isoform 1 [Canis
            familiaris].
          Length = 448

 Score =  852 bits (2201), Expect = 0.0
 Identities = 414/439 (94%), Positives = 420/439 (95%)
 Frame = +3

Query: 105  MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 284
            MRECIS+HVGQAGVQ+GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSF TFF ETGAGK
Sbjct: 1    MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFTTFFCETGAGK 60

Query: 285  HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 464
            HVPRAVFVDLEPTVIDE+R G YRQLFHPEQLITGKEDAANNYARGHYTIGKEIID VLD
Sbjct: 61   HVPRAVFVDLEPTVIDEIRNGPYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDPVLD 120

Query: 465  RIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTA 644
            RIRKL+DQCTGLQGFLVFH            LLMERLSVDYGKKSKLEFSIYPAPQVSTA
Sbjct: 121  RIRKLSDQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 180

Query: 645  VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 824
            VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLI QIVSSITA
Sbjct: 181  VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA 240

Query: 825  SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 1004
            SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
Sbjct: 241  SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 300

Query: 1005 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 1184
            QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIA IKTKR+IQFVDWCPTGFKVGINYQPP
Sbjct: 301  QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIAAIKTKRSIQFVDWCPTGFKVGINYQPP 360

Query: 1185 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 1364
            TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361  TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420

Query: 1365 AREDMAALEKDYEEVGVDS 1421
            AREDMAALEKDYEEVG+DS
Sbjct: 421  AREDMAALEKDYEEVGIDS 439


  Database: RefSeq49_CP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,874,504
  Number of sequences in database:  33,336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 64,846,196
Number of extensions: 1844895
Number of successful extensions: 7746
Number of sequences better than 1.0e-05: 110
Number of HSP's gapped: 7591
Number of HSP's successfully gapped: 137
Length of query: 531
Length of database: 18,874,504
Length adjustment: 108
Effective length of query: 423
Effective length of database: 15,274,216
Effective search space: 6460993368
Effective search space used: 6460993368
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

Search to RefSeqHP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-000464
         (1593 letters)

Database: RefSeq49_HP.fasta 
           32,964 sequences; 18,297,164 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_006000.2| tubulin alpha-1A chain [Homo sapiens].               874   0.0  
Alignment   gi|NP_006073.2| tubulin alpha-1B chain [Homo sapiens].               870   0.0  
Alignment   gi|NP_525125.2| tubulin alpha-3C/D chain [Homo sapiens].             867   0.0  
Alignment   gi|NP_116093.1| tubulin alpha-1C chain [Homo sapiens].               867   0.0  
Alignment   gi|NP_005992.1| tubulin alpha-3C/D chain [Homo sapiens].             867   0.0  
Alignment   gi|NP_997195.1| tubulin alpha-3E chain [Homo sapiens].               853   0.0  
Alignment   gi|NP_005991.1| tubulin alpha-4A chain [Homo sapiens].               852   0.0  
Alignment   gi|NP_061816.1| tubulin alpha-8 chain isoform 1 [Homo sapiens].      802   0.0  
Alignment   gi|NP_001180343.1| tubulin alpha-8 chain isoform 2 [Homo sapien...   697   0.0  
Alignment   gi|NP_079079.1| tubulin alpha chain-like 3 isoform 1 [Homo sapi...   677   0.0  

>ref|NP_006000.2| tubulin alpha-1A chain [Homo sapiens].
          Length = 451

 Score =  874 bits (2258), Expect = 0.0
 Identities = 428/440 (97%), Positives = 428/440 (97%)
 Frame = +3

Query: 105  MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 284
            MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
Sbjct: 1    MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60

Query: 285  HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 464
            HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
Sbjct: 61   HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 120

Query: 465  RIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTA 644
            RIRKLADQCTGLQGFLVFH            LLMERLSVDYGKKSKLEFSIYPAPQVSTA
Sbjct: 121  RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 180

Query: 645  VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 824
            VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
Sbjct: 181  VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 240

Query: 825  SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 1004
            SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
Sbjct: 241  SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 300

Query: 1005 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 1184
            QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
Sbjct: 301  QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 360

Query: 1185 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 1364
            TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361  TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420

Query: 1365 AREDMAALEKDYEEVGVDSV 1424
            AREDMAALEKDYEEVGVDSV
Sbjct: 421  AREDMAALEKDYEEVGVDSV 440


>ref|NP_006073.2| tubulin alpha-1B chain [Homo sapiens].
          Length = 451

 Score =  870 bits (2248), Expect = 0.0
 Identities = 426/440 (96%), Positives = 427/440 (97%)
 Frame = +3

Query: 105  MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 284
            MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
Sbjct: 1    MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60

Query: 285  HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 464
            HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
Sbjct: 61   HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 120

Query: 465  RIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTA 644
            RIRKLADQCTGLQGFLVFH            LLMERLSVDYGKKSKLEFSIYPAPQVSTA
Sbjct: 121  RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 180

Query: 645  VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 824
            VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLI QIVSSITA
Sbjct: 181  VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA 240

Query: 825  SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 1004
            SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
Sbjct: 241  SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 300

Query: 1005 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 1184
            QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKR+IQFVDWCPTGFKVGINYQPP
Sbjct: 301  QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPP 360

Query: 1185 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 1364
            TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361  TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420

Query: 1365 AREDMAALEKDYEEVGVDSV 1424
            AREDMAALEKDYEEVGVDSV
Sbjct: 421  AREDMAALEKDYEEVGVDSV 440


>ref|NP_525125.2| tubulin alpha-3C/D chain [Homo sapiens].
          Length = 450

 Score =  867 bits (2240), Expect = 0.0
 Identities = 421/440 (95%), Positives = 427/440 (97%)
 Frame = +3

Query: 105  MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 284
            MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
Sbjct: 1    MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60

Query: 285  HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 464
            HVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI+DLVLD
Sbjct: 61   HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 120

Query: 465  RIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTA 644
            RIRKLAD CTGLQGFL+FH            LLMERLSVDYGKKSKLEF+IYPAPQVSTA
Sbjct: 121  RIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTA 180

Query: 645  VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 824
            VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
Sbjct: 181  VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 240

Query: 825  SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 1004
            SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
Sbjct: 241  SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 300

Query: 1005 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 1184
            QMVKCDPRHGKYMACC+LYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
Sbjct: 301  QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 360

Query: 1185 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 1364
            TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361  TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420

Query: 1365 AREDMAALEKDYEEVGVDSV 1424
            ARED+AALEKDYEEVGVDSV
Sbjct: 421  AREDLAALEKDYEEVGVDSV 440


>ref|NP_116093.1| tubulin alpha-1C chain [Homo sapiens].
          Length = 449

 Score =  867 bits (2240), Expect = 0.0
 Identities = 423/439 (96%), Positives = 425/439 (96%)
 Frame = +3

Query: 105  MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 284
            MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
Sbjct: 1    MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60

Query: 285  HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 464
            HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
Sbjct: 61   HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 120

Query: 465  RIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTA 644
            RIRKLADQCTGLQGFLVFH            LLMERLSVDYGKKSKLEFSIYPAPQVSTA
Sbjct: 121  RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 180

Query: 645  VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 824
            VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLI QIVSSITA
Sbjct: 181  VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA 240

Query: 825  SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 1004
            SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQL+VAEITNACFEPAN
Sbjct: 241  SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNACFEPAN 300

Query: 1005 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 1184
            QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
Sbjct: 301  QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 360

Query: 1185 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 1364
            TVVPGGDLAKVQRAVCMLSNTTA+AEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361  TVVPGGDLAKVQRAVCMLSNTTAVAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420

Query: 1365 AREDMAALEKDYEEVGVDS 1421
            AREDMAALEKDYEEVG DS
Sbjct: 421  AREDMAALEKDYEEVGADS 439


>ref|NP_005992.1| tubulin alpha-3C/D chain [Homo sapiens].
          Length = 450

 Score =  867 bits (2240), Expect = 0.0
 Identities = 421/440 (95%), Positives = 427/440 (97%)
 Frame = +3

Query: 105  MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 284
            MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
Sbjct: 1    MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60

Query: 285  HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 464
            HVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI+DLVLD
Sbjct: 61   HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 120

Query: 465  RIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTA 644
            RIRKLAD CTGLQGFL+FH            LLMERLSVDYGKKSKLEF+IYPAPQVSTA
Sbjct: 121  RIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTA 180

Query: 645  VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 824
            VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
Sbjct: 181  VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 240

Query: 825  SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 1004
            SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
Sbjct: 241  SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 300

Query: 1005 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 1184
            QMVKCDPRHGKYMACC+LYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
Sbjct: 301  QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 360

Query: 1185 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 1364
            TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361  TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420

Query: 1365 AREDMAALEKDYEEVGVDSV 1424
            ARED+AALEKDYEEVGVDSV
Sbjct: 421  AREDLAALEKDYEEVGVDSV 440


>ref|NP_997195.1| tubulin alpha-3E chain [Homo sapiens].
          Length = 450

 Score =  853 bits (2203), Expect = 0.0
 Identities = 416/440 (94%), Positives = 423/440 (96%)
 Frame = +3

Query: 105  MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 284
            MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
Sbjct: 1    MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60

Query: 285  HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 464
            HVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLITGKEDAA+NYARGHYTIGKEI+DLVLD
Sbjct: 61   HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAASNYARGHYTIGKEIVDLVLD 120

Query: 465  RIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTA 644
            RIRKLAD CTGLQGFL+FH            LLMERLSVDY KKSKLEF+IYPAPQVSTA
Sbjct: 121  RIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYSKKSKLEFAIYPAPQVSTA 180

Query: 645  VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 824
            VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
Sbjct: 181  VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 240

Query: 825  SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 1004
            SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
Sbjct: 241  SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 300

Query: 1005 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 1184
            QMVKCDPRHGKYMACC+LYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
Sbjct: 301  QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 360

Query: 1185 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 1364
            TVVPGGDLAKVQRAVCMLSNTTAIAEAWARL HKFDLMYAK AFVHWYVGEGMEEGEFSE
Sbjct: 361  TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLVHKFDLMYAKWAFVHWYVGEGMEEGEFSE 420

Query: 1365 AREDMAALEKDYEEVGVDSV 1424
            ARED+AALEKD EEVGVDSV
Sbjct: 421  AREDLAALEKDCEEVGVDSV 440


>ref|NP_005991.1| tubulin alpha-4A chain [Homo sapiens].
          Length = 448

 Score =  852 bits (2201), Expect = 0.0
 Identities = 414/439 (94%), Positives = 420/439 (95%)
 Frame = +3

Query: 105  MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 284
            MRECIS+HVGQAGVQ+GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSF TFF ETGAGK
Sbjct: 1    MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFTTFFCETGAGK 60

Query: 285  HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 464
            HVPRAVFVDLEPTVIDE+R G YRQLFHPEQLITGKEDAANNYARGHYTIGKEIID VLD
Sbjct: 61   HVPRAVFVDLEPTVIDEIRNGPYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDPVLD 120

Query: 465  RIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTA 644
            RIRKL+DQCTGLQGFLVFH            LLMERLSVDYGKKSKLEFSIYPAPQVSTA
Sbjct: 121  RIRKLSDQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 180

Query: 645  VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 824
            VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLI QIVSSITA
Sbjct: 181  VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA 240

Query: 825  SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 1004
            SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
Sbjct: 241  SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 300

Query: 1005 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 1184
            QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIA IKTKR+IQFVDWCPTGFKVGINYQPP
Sbjct: 301  QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIAAIKTKRSIQFVDWCPTGFKVGINYQPP 360

Query: 1185 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 1364
            TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361  TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420

Query: 1365 AREDMAALEKDYEEVGVDS 1421
            AREDMAALEKDYEEVG+DS
Sbjct: 421  AREDMAALEKDYEEVGIDS 439


>ref|NP_061816.1| tubulin alpha-8 chain isoform 1 [Homo sapiens].
          Length = 449

 Score =  802 bits (2072), Expect = 0.0
 Identities = 387/439 (88%), Positives = 404/439 (92%)
 Frame = +3

Query: 105  MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 284
            MRECIS+HVGQAGVQIGNACWEL+CLEHGIQ DG   +  +    DDSF TFFSETG GK
Sbjct: 1    MRECISVHVGQAGVQIGNACWELFCLEHGIQADGTFDAQASKINDDDSFTTFFSETGNGK 60

Query: 285  HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 464
            HVPRAV +DLEPTV+DEVR GTYRQLFHPEQLITGKEDAANNYARGHYT+GKE IDLVLD
Sbjct: 61   HVPRAVMIDLEPTVVDEVRAGTYRQLFHPEQLITGKEDAANNYARGHYTVGKESIDLVLD 120

Query: 465  RIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTA 644
            RIRKL D C+GLQGFL+FH            LLMERLS+DYGKKSKLEF+IYPAPQVSTA
Sbjct: 121  RIRKLTDACSGLQGFLIFHSFGGGTGSGFTSLLMERLSLDYGKKSKLEFAIYPAPQVSTA 180

Query: 645  VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 824
            VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLI QIVSSITA
Sbjct: 181  VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA 240

Query: 825  SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 1004
            SLRFDGALNVDLTEFQTNLVPYPRIHFPL TYAP+ISAEKAYHEQLSVAEIT++CFEP +
Sbjct: 241  SLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPIISAEKAYHEQLSVAEITSSCFEPNS 300

Query: 1005 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 1184
            QMVKCDPRHGKYMACC+LYRGDVVPKDVN AIA IKTKRTIQFVDWCPTGFKVGINYQPP
Sbjct: 301  QMVKCDPRHGKYMACCMLYRGDVVPKDVNVAIAAIKTKRTIQFVDWCPTGFKVGINYQPP 360

Query: 1185 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 1364
            TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361  TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420

Query: 1365 AREDMAALEKDYEEVGVDS 1421
            ARED+AALEKDYEEVG DS
Sbjct: 421  AREDLAALEKDYEEVGTDS 439


>ref|NP_001180343.1| tubulin alpha-8 chain isoform 2 [Homo sapiens].
          Length = 383

 Score =  697 bits (1800), Expect = 0.0
 Identities = 337/372 (90%), Positives = 350/372 (94%)
 Frame = +3

Query: 306  VDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLAD 485
            +DLEPTV+DEVR GTYRQLFHPEQLITGKEDAANNYARGHYT+GKE IDLVLDRIRKL D
Sbjct: 2    IDLEPTVVDEVRAGTYRQLFHPEQLITGKEDAANNYARGHYTVGKESIDLVLDRIRKLTD 61

Query: 486  QCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNS 665
             C+GLQGFL+FH            LLMERLS+DYGKKSKLEF+IYPAPQVSTAVVEPYNS
Sbjct: 62   ACSGLQGFLIFHSFGGGTGSGFTSLLMERLSLDYGKKSKLEFAIYPAPQVSTAVVEPYNS 121

Query: 666  ILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGA 845
            ILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLI QIVSSITASLRFDGA
Sbjct: 122  ILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGA 181

Query: 846  LNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDP 1025
            LNVDLTEFQTNLVPYPRIHFPL TYAP+ISAEKAYHEQLSVAEIT++CFEP +QMVKCDP
Sbjct: 182  LNVDLTEFQTNLVPYPRIHFPLVTYAPIISAEKAYHEQLSVAEITSSCFEPNSQMVKCDP 241

Query: 1026 RHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGD 1205
            RHGKYMACC+LYRGDVVPKDVN AIA IKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGD
Sbjct: 242  RHGKYMACCMLYRGDVVPKDVNVAIAAIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGD 301

Query: 1206 LAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAA 1385
            LAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEARED+AA
Sbjct: 302  LAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA 361

Query: 1386 LEKDYEEVGVDS 1421
            LEKDYEEVG DS
Sbjct: 362  LEKDYEEVGTDS 373


>ref|NP_079079.1| tubulin alpha chain-like 3 isoform 1 [Homo sapiens].
          Length = 446

 Score =  677 bits (1746), Expect = 0.0
 Identities = 317/443 (71%), Positives = 379/443 (85%), Gaps = 8/443 (1%)
 Frame = +3

Query: 105  MRECISIHVGQAGVQIGNACWELYCLEHGIQPDG--------QMPSDKTIGGGDDSFNTF 260
            MREC+SIH+GQAG+QIG+ACWELYCLEHGIQP+G        Q+ + K +   + SF+TF
Sbjct: 1    MRECLSIHIGQAGIQIGDACWELYCLEHGIQPNGVVLDTQQDQLENAK-MEHTNASFDTF 59

Query: 261  FSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGK 440
            F ET AGKHVPRA+FVDLEPTVID +RTG +R LFHPEQL++GKEDAANNYARG Y++G 
Sbjct: 60   FCETRAGKHVPRALFVDLEPTVIDGIRTGQHRSLFHPEQLLSGKEDAANNYARGRYSVGS 119

Query: 441  EIIDLVLDRIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIY 620
            E+IDLVL+R RKLA+QC GLQGFL+F             LLMERL+ +Y +K+KLEFS+Y
Sbjct: 120  EVIDLVLERTRKLAEQCGGLQGFLIFRSFGGGTGSGFTSLLMERLTGEYSRKTKLEFSVY 179

Query: 621  PAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIG 800
            PAP++STAVVEPYNS+LTTH+T EH+DC FMVDNEA+YDIC R L +E P++ ++NRL+ 
Sbjct: 180  PAPRISTAVVEPYNSVLTTHSTTEHTDCTFMVDNEAVYDICHRKLGVECPSHASINRLVV 239

Query: 801  QIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEIT 980
            Q+VSSITASLRF+G LNVDL EFQTNLVPYPRIHFP+  +AP++SA+KAYHEQ SV++IT
Sbjct: 240  QVVSSITASLRFEGPLNVDLIEFQTNLVPYPRIHFPMTAFAPIVSADKAYHEQFSVSDIT 299

Query: 981  NACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFK 1160
             ACFE +NQ+VKCDPR GKYMACCLLYRGDVVPK+VNAAIA  K++ ++QFVDWCPTGFK
Sbjct: 300  TACFESSNQLVKCDPRLGKYMACCLLYRGDVVPKEVNAAIAATKSRHSVQFVDWCPTGFK 359

Query: 1161 VGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEG 1340
            VGIN +PPTV+PGGDLAKV R++CMLSNTTAI EAWARLDHKFDLMYAKRAF+HWY+ EG
Sbjct: 360  VGINNRPPTVMPGGDLAKVHRSICMLSNTTAIVEAWARLDHKFDLMYAKRAFLHWYLREG 419

Query: 1341 MEEGEFSEAREDMAALEKDYEEV 1409
            MEE EF EARED+AALE+DYEEV
Sbjct: 420  MEEAEFLEAREDLAALERDYEEV 442


  Database: RefSeq49_HP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,297,164
  Number of sequences in database:  32,964
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 63,790,536
Number of extensions: 1823333
Number of successful extensions: 7285
Number of sequences better than 1.0e-05: 29
Number of HSP's gapped: 7151
Number of HSP's successfully gapped: 30
Length of query: 531
Length of database: 18,297,164
Length adjustment: 107
Effective length of query: 424
Effective length of database: 14,770,016
Effective search space: 6262486784
Effective search space used: 6262486784
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

Search to RefSeqMP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-000464
         (1593 letters)

Database: RefSeq49_MP.fasta 
           30,036 sequences; 15,617,559 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_035783.1| tubulin alpha-1A chain [Mus musculus].               874   0.0  
Alignment   gi|NP_035784.1| tubulin alpha-1B chain [Mus musculus].               870   0.0  
Alignment   gi|NP_033474.1| tubulin alpha-1C chain [Mus musculus].               867   0.0  
Alignment   gi|NP_033475.1| tubulin alpha-3 chain [Mus musculus].                867   0.0  
Alignment   gi|NP_033472.1| tubulin alpha-3 chain [Mus musculus].                867   0.0  
Alignment   gi|NP_033473.1| tubulin alpha-4A chain [Mus musculus].               852   0.0  
Alignment   gi|XP_486246.1| PREDICTED: tubulin alpha-1B chain isoform 1 [Mu...   841   0.0  
Alignment   gi|XP_909750.1| PREDICTED: tubulin alpha-1B chain isoform 4 [Mu...   841   0.0  
Alignment   gi|NP_059075.1| tubulin alpha-8 chain [Mus musculus].                802   0.0  
Alignment   gi|NP_001029051.2| tubulin alpha chain-like 3 [Mus musculus].        679   0.0  

>ref|NP_035783.1| tubulin alpha-1A chain [Mus musculus].
          Length = 451

 Score =  874 bits (2258), Expect = 0.0
 Identities = 428/440 (97%), Positives = 428/440 (97%)
 Frame = +3

Query: 105  MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 284
            MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
Sbjct: 1    MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60

Query: 285  HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 464
            HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
Sbjct: 61   HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 120

Query: 465  RIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTA 644
            RIRKLADQCTGLQGFLVFH            LLMERLSVDYGKKSKLEFSIYPAPQVSTA
Sbjct: 121  RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 180

Query: 645  VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 824
            VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
Sbjct: 181  VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 240

Query: 825  SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 1004
            SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
Sbjct: 241  SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 300

Query: 1005 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 1184
            QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
Sbjct: 301  QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 360

Query: 1185 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 1364
            TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361  TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420

Query: 1365 AREDMAALEKDYEEVGVDSV 1424
            AREDMAALEKDYEEVGVDSV
Sbjct: 421  AREDMAALEKDYEEVGVDSV 440


>ref|NP_035784.1| tubulin alpha-1B chain [Mus musculus].
          Length = 451

 Score =  870 bits (2248), Expect = 0.0
 Identities = 426/440 (96%), Positives = 427/440 (97%)
 Frame = +3

Query: 105  MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 284
            MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
Sbjct: 1    MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60

Query: 285  HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 464
            HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
Sbjct: 61   HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 120

Query: 465  RIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTA 644
            RIRKLADQCTGLQGFLVFH            LLMERLSVDYGKKSKLEFSIYPAPQVSTA
Sbjct: 121  RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 180

Query: 645  VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 824
            VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLI QIVSSITA
Sbjct: 181  VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA 240

Query: 825  SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 1004
            SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
Sbjct: 241  SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 300

Query: 1005 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 1184
            QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKR+IQFVDWCPTGFKVGINYQPP
Sbjct: 301  QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPP 360

Query: 1185 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 1364
            TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361  TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420

Query: 1365 AREDMAALEKDYEEVGVDSV 1424
            AREDMAALEKDYEEVGVDSV
Sbjct: 421  AREDMAALEKDYEEVGVDSV 440


>ref|NP_033474.1| tubulin alpha-1C chain [Mus musculus].
          Length = 449

 Score =  867 bits (2241), Expect = 0.0
 Identities = 424/439 (96%), Positives = 425/439 (96%)
 Frame = +3

Query: 105  MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 284
            MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
Sbjct: 1    MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60

Query: 285  HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 464
            HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
Sbjct: 61   HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 120

Query: 465  RIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTA 644
            RIRKLADQCTGLQGFLVFH            LLMERLSVDYGKKSKLEFSIYPAPQVSTA
Sbjct: 121  RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 180

Query: 645  VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 824
            VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLI QIVSSITA
Sbjct: 181  VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA 240

Query: 825  SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 1004
            SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQL+VAEITNACFEPAN
Sbjct: 241  SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNACFEPAN 300

Query: 1005 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 1184
            QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
Sbjct: 301  QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 360

Query: 1185 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 1364
            TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361  TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420

Query: 1365 AREDMAALEKDYEEVGVDS 1421
            AREDMAALEKDYEEVG DS
Sbjct: 421  AREDMAALEKDYEEVGADS 439


>ref|NP_033475.1| tubulin alpha-3 chain [Mus musculus].
          Length = 450

 Score =  867 bits (2240), Expect = 0.0
 Identities = 421/440 (95%), Positives = 427/440 (97%)
 Frame = +3

Query: 105  MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 284
            MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
Sbjct: 1    MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60

Query: 285  HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 464
            HVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI+DLVLD
Sbjct: 61   HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 120

Query: 465  RIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTA 644
            RIRKLAD CTGLQGFL+FH            LLMERLSVDYGKKSKLEF+IYPAPQVSTA
Sbjct: 121  RIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTA 180

Query: 645  VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 824
            VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
Sbjct: 181  VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 240

Query: 825  SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 1004
            SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
Sbjct: 241  SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 300

Query: 1005 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 1184
            QMVKCDPRHGKYMACC+LYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
Sbjct: 301  QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 360

Query: 1185 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 1364
            TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361  TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420

Query: 1365 AREDMAALEKDYEEVGVDSV 1424
            ARED+AALEKDYEEVGVDSV
Sbjct: 421  AREDLAALEKDYEEVGVDSV 440


>ref|NP_033472.1| tubulin alpha-3 chain [Mus musculus].
          Length = 450

 Score =  867 bits (2240), Expect = 0.0
 Identities = 421/440 (95%), Positives = 427/440 (97%)
 Frame = +3

Query: 105  MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 284
            MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
Sbjct: 1    MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60

Query: 285  HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 464
            HVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI+DLVLD
Sbjct: 61   HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 120

Query: 465  RIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTA 644
            RIRKLAD CTGLQGFL+FH            LLMERLSVDYGKKSKLEF+IYPAPQVSTA
Sbjct: 121  RIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTA 180

Query: 645  VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 824
            VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
Sbjct: 181  VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 240

Query: 825  SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 1004
            SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
Sbjct: 241  SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 300

Query: 1005 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 1184
            QMVKCDPRHGKYMACC+LYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
Sbjct: 301  QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 360

Query: 1185 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 1364
            TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361  TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420

Query: 1365 AREDMAALEKDYEEVGVDSV 1424
            ARED+AALEKDYEEVGVDSV
Sbjct: 421  AREDLAALEKDYEEVGVDSV 440


>ref|NP_033473.1| tubulin alpha-4A chain [Mus musculus].
          Length = 448

 Score =  852 bits (2201), Expect = 0.0
 Identities = 414/439 (94%), Positives = 420/439 (95%)
 Frame = +3

Query: 105  MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 284
            MRECIS+HVGQAGVQ+GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSF TFF ETGAGK
Sbjct: 1    MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFTTFFCETGAGK 60

Query: 285  HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 464
            HVPRAVFVDLEPTVIDE+R G YRQLFHPEQLITGKEDAANNYARGHYTIGKEIID VLD
Sbjct: 61   HVPRAVFVDLEPTVIDEIRNGPYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDPVLD 120

Query: 465  RIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTA 644
            RIRKL+DQCTGLQGFLVFH            LLMERLSVDYGKKSKLEFSIYPAPQVSTA
Sbjct: 121  RIRKLSDQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 180

Query: 645  VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 824
            VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLI QIVSSITA
Sbjct: 181  VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA 240

Query: 825  SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 1004
            SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
Sbjct: 241  SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 300

Query: 1005 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 1184
            QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIA IKTKR+IQFVDWCPTGFKVGINYQPP
Sbjct: 301  QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIAAIKTKRSIQFVDWCPTGFKVGINYQPP 360

Query: 1185 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 1364
            TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361  TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420

Query: 1365 AREDMAALEKDYEEVGVDS 1421
            AREDMAALEKDYEEVG+DS
Sbjct: 421  AREDMAALEKDYEEVGIDS 439


>ref|XP_486246.1| PREDICTED: tubulin alpha-1B chain isoform 1 [Mus musculus].
          Length = 450

 Score =  841 bits (2172), Expect = 0.0
 Identities = 415/440 (94%), Positives = 418/440 (95%)
 Frame = +3

Query: 105  MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 284
            MRECISIHVGQAGVQIGNACWELYCLEHGIQ DGQMPS KTI GGDDSFNTF SETGAGK
Sbjct: 1    MRECISIHVGQAGVQIGNACWELYCLEHGIQADGQMPSGKTIRGGDDSFNTF-SETGAGK 59

Query: 285  HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 464
            HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
Sbjct: 60   HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 119

Query: 465  RIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTA 644
             IRKLADQC GLQGFLVFH            LLMERLSVDYGKKSKLEFSIYPAPQVSTA
Sbjct: 120  TIRKLADQCIGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 179

Query: 645  VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 824
            VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIE PTYTNLNRLI QIVSSITA
Sbjct: 180  VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIEHPTYTNLNRLISQIVSSITA 239

Query: 825  SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 1004
            SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHE LSVAEITNACFEPAN
Sbjct: 240  SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEHLSVAEITNACFEPAN 299

Query: 1005 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 1184
            QMVKCDPRHGKYMACCLLYRGDV+PKDVNAAIATIKTKR+IQFVDWCPTGFKVGINYQPP
Sbjct: 300  QMVKCDPRHGKYMACCLLYRGDVIPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPP 359

Query: 1185 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 1364
            TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFV+WYVGE MEEGEFSE
Sbjct: 360  TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVYWYVGESMEEGEFSE 419

Query: 1365 AREDMAALEKDYEEVGVDSV 1424
            AREDMAALEKDYEEVGVDSV
Sbjct: 420  AREDMAALEKDYEEVGVDSV 439


>ref|XP_909750.1| PREDICTED: tubulin alpha-1B chain isoform 4 [Mus musculus].
          Length = 450

 Score =  841 bits (2172), Expect = 0.0
 Identities = 415/440 (94%), Positives = 418/440 (95%)
 Frame = +3

Query: 105  MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 284
            MRECISIHVGQAGVQIGNACWELYCLEHGIQ DGQMPS KTI GGDDSFNTF SETGAGK
Sbjct: 1    MRECISIHVGQAGVQIGNACWELYCLEHGIQADGQMPSGKTIRGGDDSFNTF-SETGAGK 59

Query: 285  HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 464
            HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
Sbjct: 60   HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 119

Query: 465  RIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTA 644
             IRKLADQC GLQGFLVFH            LLMERLSVDYGKKSKLEFSIYPAPQVSTA
Sbjct: 120  TIRKLADQCIGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 179

Query: 645  VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 824
            VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIE PTYTNLNRLI QIVSSITA
Sbjct: 180  VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIEHPTYTNLNRLISQIVSSITA 239

Query: 825  SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 1004
            SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHE LSVAEITNACFEPAN
Sbjct: 240  SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEHLSVAEITNACFEPAN 299

Query: 1005 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 1184
            QMVKCDPRHGKYMACCLLYRGDV+PKDVNAAIATIKTKR+IQFVDWCPTGFKVGINYQPP
Sbjct: 300  QMVKCDPRHGKYMACCLLYRGDVIPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPP 359

Query: 1185 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 1364
            TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFV+WYVGE MEEGEFSE
Sbjct: 360  TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVYWYVGESMEEGEFSE 419

Query: 1365 AREDMAALEKDYEEVGVDSV 1424
            AREDMAALEKDYEEVGVDSV
Sbjct: 420  AREDMAALEKDYEEVGVDSV 439


>ref|NP_059075.1| tubulin alpha-8 chain [Mus musculus].
          Length = 449

 Score =  802 bits (2072), Expect = 0.0
 Identities = 388/439 (88%), Positives = 404/439 (92%)
 Frame = +3

Query: 105  MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 284
            MRECIS+HVGQAGVQIGNACWEL+CLEHGIQ DG   +  +    DDSF TFFSETG GK
Sbjct: 1    MRECISVHVGQAGVQIGNACWELFCLEHGIQADGTFGTQASKINDDDSFTTFFSETGNGK 60

Query: 285  HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 464
            HVPRAV VDLEPTV+DEVR GTYRQLFHPEQLITGKEDAANNYARGHYT+GKE IDLVLD
Sbjct: 61   HVPRAVMVDLEPTVVDEVRAGTYRQLFHPEQLITGKEDAANNYARGHYTVGKESIDLVLD 120

Query: 465  RIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTA 644
            RIRKL D C+GLQGFL+FH            LLMERLS+DYGKKSKLEF+IYPAPQVSTA
Sbjct: 121  RIRKLTDACSGLQGFLIFHSFGGGTGSGFTSLLMERLSLDYGKKSKLEFAIYPAPQVSTA 180

Query: 645  VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 824
            VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLI QIVSSITA
Sbjct: 181  VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA 240

Query: 825  SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 1004
            SLRFDGALNVDLTEFQTNLVPYPRIHFPL TYAP+ISAEKAYHEQLSVAEIT++CFEP +
Sbjct: 241  SLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPIISAEKAYHEQLSVAEITSSCFEPNS 300

Query: 1005 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 1184
            QMVKCDPRHGKYMACC+LYRGDVVPKDVN AIA IKTKRTIQFVDWCPTGFKVGINYQPP
Sbjct: 301  QMVKCDPRHGKYMACCMLYRGDVVPKDVNVAIAAIKTKRTIQFVDWCPTGFKVGINYQPP 360

Query: 1185 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 1364
            TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361  TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420

Query: 1365 AREDMAALEKDYEEVGVDS 1421
            ARED+AALEKDYEEVG DS
Sbjct: 421  AREDLAALEKDYEEVGTDS 439


>ref|NP_001029051.2| tubulin alpha chain-like 3 [Mus musculus].
          Length = 446

 Score =  679 bits (1753), Expect = 0.0
 Identities = 321/444 (72%), Positives = 377/444 (84%), Gaps = 7/444 (1%)
 Frame = +3

Query: 105  MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDK-------TIGGGDDSFNTFF 263
            MREC+SIH+GQAGVQIG+ACWELYCLEHGIQPDG +   +        +   + S +TFF
Sbjct: 1    MRECLSIHIGQAGVQIGDACWELYCLEHGIQPDGFILDHQHDNLENPKVEHMNASLDTFF 60

Query: 264  SETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKE 443
             ET AGKHVPR +F+DLEPTVID +R G Y  LFHPEQL+ GKEDAAN YARG Y++G E
Sbjct: 61   HETRAGKHVPRTLFMDLEPTVIDGIRVGRYHSLFHPEQLVNGKEDAANTYARGRYSVGSE 120

Query: 444  IIDLVLDRIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYP 623
            +I+LVL+RIRKLA+QC+GLQGFL++             LLMERLSV+Y KK KLEFS+YP
Sbjct: 121  VIELVLERIRKLAEQCSGLQGFLIYRSFGGGTGSGFTSLLMERLSVEYCKKIKLEFSVYP 180

Query: 624  APQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQ 803
            +P++STAVVEPYN+ILTTH+T+E+SDCAFMVDNEA+YDIC+  L IERP+Y ++NRLI Q
Sbjct: 181  SPRISTAVVEPYNAILTTHSTIEYSDCAFMVDNEALYDICQHKLGIERPSYASINRLIAQ 240

Query: 804  IVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITN 983
            + SSITASLRF+G LNVDL EFQTNLVPYPRIHFP+   AP+ISAEKAY EQLSV+++T 
Sbjct: 241  VSSSITASLRFEGPLNVDLIEFQTNLVPYPRIHFPITALAPIISAEKAYQEQLSVSDVTA 300

Query: 984  ACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKV 1163
            +CFE +NQ+VKCDPR GKYMACCLLYRGDVVPKDVN AIA +K++ ++QFVDWCPTGFKV
Sbjct: 301  SCFEVSNQLVKCDPRLGKYMACCLLYRGDVVPKDVNEAIAAMKSRTSVQFVDWCPTGFKV 360

Query: 1164 GINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGM 1343
            GINYQPP VVPGGDLA+VQRAVCMLSNTTAI EAWARLDHKFDLMYAK+AF+HWY+ EGM
Sbjct: 361  GINYQPPAVVPGGDLARVQRAVCMLSNTTAIVEAWARLDHKFDLMYAKKAFLHWYITEGM 420

Query: 1344 EEGEFSEAREDMAALEKDYEEVGV 1415
            E GEF EARED+AALEKDYEEVG+
Sbjct: 421  ELGEFVEAREDLAALEKDYEEVGL 444


  Database: RefSeq49_MP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 15,617,559
  Number of sequences in database:  30,036
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 54,027,395
Number of extensions: 1522233
Number of successful extensions: 6180
Number of sequences better than 1.0e-05: 28
Number of HSP's gapped: 6028
Number of HSP's successfully gapped: 28
Length of query: 531
Length of database: 15,617,559
Length adjustment: 106
Effective length of query: 425
Effective length of database: 12,433,743
Effective search space: 5284340775
Effective search space used: 5284340775
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

Search to RefSeqSP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-000464
         (1593 letters)

Database: RefSeq49_SP.fasta 
           24,897 sequences; 11,343,932 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001038009.1| tubulin alpha-1B chain [Sus scrofa].              870   0.0  
Alignment   gi|XP_001929621.1| PREDICTED: tubulin alpha-3 chain [Sus scrofa].    867   0.0  
Alignment   gi|XP_003133048.1| PREDICTED: tubulin alpha-3 chain-like [Sus s...   867   0.0  
Alignment   gi|XP_001928233.1| PREDICTED: tubulin alpha-1D chain [Sus scrof...   865   0.0  
Alignment   gi|XP_003355423.1| PREDICTED: tubulin alpha-1C chain isoform 1 ...   865   0.0  
Alignment   gi|XP_001928370.3| PREDICTED: tubulin alpha-4A chain [Sus scrof...   852   0.0  
Alignment   gi|XP_003355425.1| PREDICTED: tubulin alpha-1C chain isoform 3 ...   788   0.0  
Alignment   gi|XP_003355424.1| PREDICTED: tubulin alpha-1C chain isoform 2 ...   788   0.0  
Alignment   gi|XP_003361673.1| PREDICTED: tubulin alpha-8 chain-like [Sus s...   691   0.0  
Alignment   gi|XP_003357831.1| PREDICTED: tubulin alpha chain-like 3-like [...   669   0.0  

>ref|NP_001038009.1| tubulin alpha-1B chain [Sus scrofa].
          Length = 451

 Score =  870 bits (2248), Expect = 0.0
 Identities = 426/440 (96%), Positives = 427/440 (97%)
 Frame = +3

Query: 105  MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 284
            MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
Sbjct: 1    MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60

Query: 285  HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 464
            HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
Sbjct: 61   HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 120

Query: 465  RIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTA 644
            RIRKLADQCTGLQGFLVFH            LLMERLSVDYGKKSKLEFSIYPAPQVSTA
Sbjct: 121  RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 180

Query: 645  VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 824
            VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLI QIVSSITA
Sbjct: 181  VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA 240

Query: 825  SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 1004
            SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
Sbjct: 241  SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 300

Query: 1005 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 1184
            QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKR+IQFVDWCPTGFKVGINYQPP
Sbjct: 301  QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPP 360

Query: 1185 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 1364
            TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361  TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420

Query: 1365 AREDMAALEKDYEEVGVDSV 1424
            AREDMAALEKDYEEVGVDSV
Sbjct: 421  AREDMAALEKDYEEVGVDSV 440


>ref|XP_001929621.1| PREDICTED: tubulin alpha-3 chain [Sus scrofa].
          Length = 450

 Score =  867 bits (2240), Expect = 0.0
 Identities = 421/440 (95%), Positives = 427/440 (97%)
 Frame = +3

Query: 105  MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 284
            MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
Sbjct: 1    MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60

Query: 285  HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 464
            HVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI+DLVLD
Sbjct: 61   HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 120

Query: 465  RIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTA 644
            RIRKLAD CTGLQGFL+FH            LLMERLSVDYGKKSKLEF+IYPAPQVSTA
Sbjct: 121  RIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTA 180

Query: 645  VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 824
            VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
Sbjct: 181  VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 240

Query: 825  SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 1004
            SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
Sbjct: 241  SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 300

Query: 1005 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 1184
            QMVKCDPRHGKYMACC+LYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
Sbjct: 301  QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 360

Query: 1185 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 1364
            TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361  TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420

Query: 1365 AREDMAALEKDYEEVGVDSV 1424
            ARED+AALEKDYEEVGVDSV
Sbjct: 421  AREDLAALEKDYEEVGVDSV 440


>ref|XP_003133048.1| PREDICTED: tubulin alpha-3 chain-like [Sus scrofa].
          Length = 450

 Score =  867 bits (2240), Expect = 0.0
 Identities = 421/440 (95%), Positives = 427/440 (97%)
 Frame = +3

Query: 105  MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 284
            MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
Sbjct: 1    MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60

Query: 285  HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 464
            HVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI+DLVLD
Sbjct: 61   HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 120

Query: 465  RIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTA 644
            RIRKLAD CTGLQGFL+FH            LLMERLSVDYGKKSKLEF+IYPAPQVSTA
Sbjct: 121  RIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTA 180

Query: 645  VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 824
            VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
Sbjct: 181  VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 240

Query: 825  SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 1004
            SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
Sbjct: 241  SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 300

Query: 1005 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 1184
            QMVKCDPRHGKYMACC+LYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
Sbjct: 301  QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 360

Query: 1185 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 1364
            TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361  TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420

Query: 1365 AREDMAALEKDYEEVGVDSV 1424
            ARED+AALEKDYEEVGVDSV
Sbjct: 421  AREDLAALEKDYEEVGVDSV 440


>ref|XP_001928233.1| PREDICTED: tubulin alpha-1D chain [Sus scrofa].
          Length = 452

 Score =  865 bits (2234), Expect = 0.0
 Identities = 421/440 (95%), Positives = 426/440 (96%)
 Frame = +3

Query: 105  MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 284
            MRECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
Sbjct: 1    MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60

Query: 285  HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 464
            HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKE+IDLVLD
Sbjct: 61   HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKELIDLVLD 120

Query: 465  RIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTA 644
            RIRKLADQCTGLQGFL+FH            LLMERLSVDYGKKSKLEFSIYPAPQVSTA
Sbjct: 121  RIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 180

Query: 645  VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 824
            VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
Sbjct: 181  VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 240

Query: 825  SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 1004
            SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
Sbjct: 241  SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 300

Query: 1005 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 1184
            QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIA IKTKR+IQFVDWCPTGFKVGINYQPP
Sbjct: 301  QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIAAIKTKRSIQFVDWCPTGFKVGINYQPP 360

Query: 1185 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 1364
            TVVP GDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361  TVVPRGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420

Query: 1365 AREDMAALEKDYEEVGVDSV 1424
            AREDMAALEKDYEEVG+DSV
Sbjct: 421  AREDMAALEKDYEEVGMDSV 440


>ref|XP_003355423.1| PREDICTED: tubulin alpha-1C chain isoform 1 [Sus scrofa].
          Length = 449

 Score =  865 bits (2234), Expect = 0.0
 Identities = 422/439 (96%), Positives = 425/439 (96%)
 Frame = +3

Query: 105  MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 284
            MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
Sbjct: 1    MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60

Query: 285  HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 464
            HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
Sbjct: 61   HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 120

Query: 465  RIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTA 644
            RIRKLADQCTGLQGFLVFH            LLMERLSVDYGKKSKLEFSIYPAPQVSTA
Sbjct: 121  RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 180

Query: 645  VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 824
            VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRL+ QIVSSITA
Sbjct: 181  VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLMSQIVSSITA 240

Query: 825  SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 1004
            SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQL+VAEITNACFEPAN
Sbjct: 241  SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNACFEPAN 300

Query: 1005 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 1184
            QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKR+IQFVDWCPTGFKVGINYQPP
Sbjct: 301  QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPP 360

Query: 1185 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 1364
            TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361  TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420

Query: 1365 AREDMAALEKDYEEVGVDS 1421
            AREDMAALEKDYEEVG DS
Sbjct: 421  AREDMAALEKDYEEVGADS 439


>ref|XP_001928370.3| PREDICTED: tubulin alpha-4A chain [Sus scrofa].
          Length = 448

 Score =  852 bits (2201), Expect = 0.0
 Identities = 414/439 (94%), Positives = 420/439 (95%)
 Frame = +3

Query: 105  MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 284
            MRECIS+HVGQAGVQ+GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSF TFF ETGAGK
Sbjct: 1    MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFTTFFCETGAGK 60

Query: 285  HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 464
            HVPRAVFVDLEPTVIDE+R G YRQLFHPEQLITGKEDAANNYARGHYTIGKEIID VLD
Sbjct: 61   HVPRAVFVDLEPTVIDEIRNGPYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDPVLD 120

Query: 465  RIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTA 644
            RIRKL+DQCTGLQGFLVFH            LLMERLSVDYGKKSKLEFSIYPAPQVSTA
Sbjct: 121  RIRKLSDQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 180

Query: 645  VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 824
            VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLI QIVSSITA
Sbjct: 181  VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA 240

Query: 825  SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 1004
            SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
Sbjct: 241  SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 300

Query: 1005 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 1184
            QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIA IKTKR+IQFVDWCPTGFKVGINYQPP
Sbjct: 301  QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIAAIKTKRSIQFVDWCPTGFKVGINYQPP 360

Query: 1185 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 1364
            TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361  TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420

Query: 1365 AREDMAALEKDYEEVGVDS 1421
            AREDMAALEKDYEEVG+DS
Sbjct: 421  AREDMAALEKDYEEVGIDS 439


>ref|XP_003355425.1| PREDICTED: tubulin alpha-1C chain isoform 3 [Sus scrofa].
          Length = 414

 Score =  788 bits (2035), Expect = 0.0
 Identities = 387/404 (95%), Positives = 390/404 (96%)
 Frame = +3

Query: 210  MPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITG 389
            MPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITG
Sbjct: 1    MPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITG 60

Query: 390  KEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLME 569
            KEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFH            LLME
Sbjct: 61   KEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLME 120

Query: 570  RLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRR 749
            RLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRR
Sbjct: 121  RLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRR 180

Query: 750  NLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPV 929
            NLDIERPTYTNLNRL+ QIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPV
Sbjct: 181  NLDIERPTYTNLNRLMSQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPV 240

Query: 930  ISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATI 1109
            ISAEKAYHEQL+VAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATI
Sbjct: 241  ISAEKAYHEQLTVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATI 300

Query: 1110 KTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKF 1289
            KTKR+IQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKF
Sbjct: 301  KTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKF 360

Query: 1290 DLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVGVDS 1421
            DLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVG DS
Sbjct: 361  DLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVGADS 404


>ref|XP_003355424.1| PREDICTED: tubulin alpha-1C chain isoform 2 [Sus scrofa].
          Length = 414

 Score =  788 bits (2035), Expect = 0.0
 Identities = 387/404 (95%), Positives = 390/404 (96%)
 Frame = +3

Query: 210  MPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITG 389
            MPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITG
Sbjct: 1    MPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITG 60

Query: 390  KEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLME 569
            KEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFH            LLME
Sbjct: 61   KEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLME 120

Query: 570  RLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRR 749
            RLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRR
Sbjct: 121  RLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRR 180

Query: 750  NLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPV 929
            NLDIERPTYTNLNRL+ QIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPV
Sbjct: 181  NLDIERPTYTNLNRLMSQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPV 240

Query: 930  ISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATI 1109
            ISAEKAYHEQL+VAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATI
Sbjct: 241  ISAEKAYHEQLTVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATI 300

Query: 1110 KTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKF 1289
            KTKR+IQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKF
Sbjct: 301  KTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKF 360

Query: 1290 DLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVGVDS 1421
            DLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVG DS
Sbjct: 361  DLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVGADS 404


>ref|XP_003361673.1| PREDICTED: tubulin alpha-8 chain-like [Sus scrofa].
          Length = 666

 Score =  691 bits (1783), Expect = 0.0
 Identities = 340/394 (86%), Positives = 353/394 (89%)
 Frame = +3

Query: 240  DDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYAR 419
            DDSF TFFSETG GKHVPRAV VDLEPTV+DEVR GTYRQLFHPEQLITGKEDAANNYAR
Sbjct: 270  DDSFTTFFSETGNGKHVPRAVMVDLEPTVVDEVRAGTYRQLFHPEQLITGKEDAANNYAR 329

Query: 420  GHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKS 599
            GHYT+GKE IDLVLDRIRKL D C+GLQGFL+FH            LLMERLS+DYGKKS
Sbjct: 330  GHYTVGKESIDLVLDRIRKLTDACSGLQGFLIFHSFGGGTGSGFTSLLMERLSLDYGKKS 389

Query: 600  KLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYT 779
            KLEF+IYPAPQVSTAVVEPYNSILTTHTTLEHS+ AFMVDNEAIYDICRRNLDIERPTYT
Sbjct: 390  KLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSESAFMVDNEAIYDICRRNLDIERPTYT 449

Query: 780  NLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQ 959
            NLNRLI QIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPL TYAP+ISAEKAYHEQ
Sbjct: 450  NLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPIISAEKAYHEQ 509

Query: 960  LSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVD 1139
            LSVAEIT++CFEP +QMVKCDPRHGKYMACC+LYRGDVVPKDVN AIA IKTKRTIQFVD
Sbjct: 510  LSVAEITSSCFEPNSQMVKCDPRHGKYMACCMLYRGDVVPKDVNVAIAAIKTKRTIQFVD 569

Query: 1140 WCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFV 1319
            WCPTGFKVGINYQPPTV               LSNTTAIAEAWARLDHKFDLMYAKRAFV
Sbjct: 570  WCPTGFKVGINYQPPTV-------XXXXXXXXLSNTTAIAEAWARLDHKFDLMYAKRAFV 622

Query: 1320 HWYVGEGMEEGEFSEAREDMAALEKDYEEVGVDS 1421
            HWYVGEGMEEGEFSEARED+AALEKDYEEVG DS
Sbjct: 623  HWYVGEGMEEGEFSEAREDLAALEKDYEEVGTDS 656


>ref|XP_003357831.1| PREDICTED: tubulin alpha chain-like 3-like [Sus scrofa].
          Length = 497

 Score =  669 bits (1725), Expect = 0.0
 Identities = 314/472 (66%), Positives = 385/472 (81%), Gaps = 16/472 (3%)
 Frame = +3

Query: 45   AVRSNNLSSPPSARRRKTAT-----MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQ 209
            AV  ++L + P+AR  + A       REC+S+H+GQAGVQIG+ACWELYCLEHGIQPDG 
Sbjct: 28   AVPGSHLPASPAARLLRAAEDPAALQRECLSVHIGQAGVQIGDACWELYCLEHGIQPDGV 87

Query: 210  MPSDKTIGGGDD-----------SFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYR 356
            +     + GG D           SF++FF ET AGKHVPRA+F+DLEPTV+D +R G YR
Sbjct: 88   V-----LDGGKDRVAHKMELAGASFDSFFCETRAGKHVPRALFMDLEPTVVDGIRAGRYR 142

Query: 357  QLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHXXXXX 536
             LFHPEQL++GKEDA+NNYARG YT+G EI+++VL+R+RKLA QC+GLQGFL+F      
Sbjct: 143  SLFHPEQLVSGKEDASNNYARGRYTVGPEIVEIVLERLRKLAKQCSGLQGFLIFRSFGGG 202

Query: 537  XXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMV 716
                   LLME+L ++Y  K+KLEFS+YPAP++STAVVEPYNS+LTTH T+EHSDC F++
Sbjct: 203  TGSGFTSLLMEQLLLEYSGKTKLEFSVYPAPRISTAVVEPYNSVLTTHPTIEHSDCTFLL 262

Query: 717  DNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPR 896
            DNEA+YDIC   LDIERP+Y ++NRL+ Q VSSITASLRF+GALNVDL EFQTNLVPYPR
Sbjct: 263  DNEAVYDICHHKLDIERPSYASINRLVSQAVSSITASLRFEGALNVDLVEFQTNLVPYPR 322

Query: 897  IHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVV 1076
            IHFP+ ++AP++S + A+HE+ SV +IT ACF+ +NQ+VKCDP  GKY+ACCLLYRGDVV
Sbjct: 323  IHFPMTSFAPILSPDNAHHEEPSVLDITAACFQRSNQLVKCDPGLGKYVACCLLYRGDVV 382

Query: 1077 PKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAI 1256
            P++VNAAIA +K++ ++QFVDWCPTGFKVGIN  PP  VPGGDLA+ QRAVCMLSNTTA+
Sbjct: 383  PREVNAAIAAVKSRDSVQFVDWCPTGFKVGINGHPPRAVPGGDLAEAQRAVCMLSNTTAV 442

Query: 1257 AEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVG 1412
            AEAWARL HKFDLM+AKRAF+HWY+ EGMEEGEF EARED+A LEKDYEEVG
Sbjct: 443  AEAWARLGHKFDLMFAKRAFLHWYIREGMEEGEFEEAREDLAVLEKDYEEVG 494


  Database: RefSeq49_SP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 11,343,932
  Number of sequences in database:  24,897
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 40,086,046
Number of extensions: 1156072
Number of successful extensions: 4865
Number of sequences better than 1.0e-05: 27
Number of HSP's gapped: 4786
Number of HSP's successfully gapped: 28
Length of query: 531
Length of database: 11,343,932
Length adjustment: 104
Effective length of query: 427
Effective length of database: 8,754,644
Effective search space: 3738232988
Effective search space used: 3738232988
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

Search to Sscrofa10_2

BLASTN 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-000464
         (1593 letters)

Database: Sscrofa_10.2.fasta 
           4582 sequences; 2,808,509,378 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Sscrofa_Chr05                                                        2099   0.0  
Sscrofa_Chr13                                                        1405   0.0  
Sscrofa_Chr03                                                        1138   0.0  
Sscrofa_Chr11                                                         868   0.0  
Sscrofa_Chr15                                                         769   0.0  
Sscrofa_Chr14                                                         515   e-143
gb|GL895007.2| Sus scrofa unplaced genomic scaffold ChrUScaf2891      424   e-116
gb|GL895352.1| Sus scrofa unplaced genomic scaffold chrU_scaffol...   194   1e-46
Sscrofa_Chr08                                                         119   5e-24
Sscrofa_Chr10                                                         103   3e-19

>Sscrofa_Chr05 
||          Length = 111506441

 Score = 2099 bits (1059), Expect = 0.0
 Identities = 1106/1118 (98%), Gaps = 3/1118 (0%)
 Strand = Plus / Minus

                                                                            
Query: 479      ggctgaccagtgcacaggtcttcagggcttcttggttttccacagctttggcgggggaac 538
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15593636 ggctgaccagtgcacaggtcttcagggcttcttggttttccacagctttggcgggggaac 15593577

                                                                            
Query: 539      gggttctgggttcacctccctgctgatggaacgtctctctgtcgattatggcaagaagtc 598
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15593576 gggttctgggttcacctccctgctgatggaacgtctctctgtcgattatggcaagaagtc 15593517

                                                                            
Query: 599      caagctggagttctccatttacccagccccccaggtttccacagctgtagttgagcccta 658
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15593516 caagctggagttctccatttacccagccccccaggtttccacagctgtagttgagcccta 15593457

                                                                            
Query: 659      caactccatcctcaccacccacaccaccctggagcactctgattgtgccttcatggtaga 718
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15593456 caactccatcctcaccacccacaccaccctggagcactctgattgtgccttcatggtaga 15593397

                                                                            
Query: 719      caatgaggccatctatgacatctgtcgtagaaacctcgatattgaacgcccaacctacac 778
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15593396 caatgaggccatctatgacatctgtcgtagaaacctcgatattgaacgcccaacctacac 15593337

                                                                            
Query: 779      taacctgaataggttgataggtcagattgtgtcctccatcactgcttccctgaggtttga 838
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15593336 taacctgaataggttgataggtcagattgtgtcctccatcactgcttccctgaggtttga 15593277

                                                                            
Query: 839      tggggccctgaatgttgatctgacagaattccagaccaacctggtgccctatccccgcat 898
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15593276 tggggccctgaatgttgatctgacagaattccagaccaacctggtgccctatccccgcat 15593217

                                                                            
Query: 899      ccatttccctctggccacatatgcccctgtcatctctgctgagaaagcctaccatgaaca 958
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15593216 ccatttccctctggccacatatgcccctgtcatctctgctgagaaagcctaccatgaaca 15593157

                                                                            
Query: 959      gctttctgtagcagagatcaccaatgcttgctttgagccagccaaccagatggtgaaatg 1018
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15593156 gctttctgtagcagagatcaccaatgcttgctttgagccagccaaccagatggtgaaatg 15593097

                                                                            
Query: 1019     tgaccctcgccatggtaaatacatggcctgctgcctgttgtaccgtggtgacgtggttcc 1078
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15593096 tgaccctcgccatggtaaatacatggcctgctgcctgttgtaccgtggtgacgtggttcc 15593037

                                                                            
Query: 1079     caaagacgtcaatgccgccatcgccaccatcaagaccaagcgtaccatccagtttgtgga 1138
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15593036 caaagacgtcaatgccgccatcgccaccatcaagaccaagcgtaccatccagtttgtgga 15592977

                                                                            
Query: 1139     ctggtgccccactggcttcaaggttggcattaattaccagccccccactgtggtccccgg 1198
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15592976 ctggtgccccactggcttcaaggttggcattaattaccagccccccactgtggtccccgg 15592917

                                                                            
Query: 1199     tggagacctggccaaagtacagcgggcagtgtgcatgctgagcaacaccacagccatcgc 1258
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15592916 tggagacctggccaaagtacagcgggcagtgtgcatgctgagcaacaccacagccatcgc 15592857

                                                                            
Query: 1259     tgaggcctgggctcgcctggaccacaagtttgacctgatgtatgccaagcgtgcctttgt 1318
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15592856 tgaggcctgggctcgcctggaccacaagtttgacctgatgtatgccaagcgtgcctttgt 15592797

                                                                            
Query: 1319     tcactggtacgtgggtgagggcatggaggaaggagagttttctgaggcccgtgaggacat 1378
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15592796 tcactggtacgtgggtgagggcatggaggaaggagagttttctgaggcccgtgaggacat 15592737

                                                                            
Query: 1379     ggctgcccttgagaaggattacgaggaggttggtgtggattctgttgaaagagagggaga 1438
                ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 15592736 ggctgcccttgagaaggattacgaggaggttggtgtggattctgttgaaggagagggaga 15592677

                                                                            
Query: 1439     gggaaaaggcgaggaatactaaagtt-aaatgtcacaaaggtgctgcttttacaggaaag 1497
                || | ||||||||||||||||||||| ||||||||||||||||||||||||||||| |||
Sbjct: 15592676 ggaagaaggcgaggaatactaaagttaaaatgtcacaaaggtgctgcttttacagggaag 15592617

                                                                            
Query: 1498     ctta-tctgtttt-aacattgaaaagttgtgggctgatcagttaatttgtatgtaacant 1555
                |||| |||||||| |||||||||||||||||| |||||||||||||||||||||| || |
Sbjct: 15592616 cttattctgttttaaacattgaaaagttgtggtctgatcagttaatttgtatgtagcagt 15592557

                                                      
Query: 1556     ggatactctcaaatacaattactgacctatgctttaaa 1593
                | ||||||||| ||||||||||||||||||||||||||
Sbjct: 15592556 gaatactctcatatacaattactgacctatgctttaaa 15592519



 Score = 1772 bits (894), Expect = 0.0
 Identities = 960/982 (97%)
 Strand = Plus / Minus

                                                                            
Query: 479      ggctgaccagtgcacaggtcttcagggcttcttggttttccacagctttggcgggggaac 538
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15557777 ggctgaccagtgcacaggtcttcagggcttcttggttttccacagctttggcgggggaac 15557718

                                                                            
Query: 539      gggttctgggttcacctccctgctgatggaacgtctctctgtcgattatggcaagaagtc 598
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15557717 gggttctgggttcacctccctgctgatggaacgtctctctgtcgattatggcaagaagtc 15557658

                                                                            
Query: 599      caagctggagttctccatttacccagccccccaggtttccacagctgtagttgagcccta 658
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15557657 caagctggagttctccatttacccagccccccaggtttccacagctgtagttgagcccta 15557598

                                                                            
Query: 659      caactccatcctcaccacccacaccaccctggagcactctgattgtgccttcatggtaga 718
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15557597 caactccatcctcaccacccacaccaccctggagcactctgattgtgccttcatggtaga 15557538

                                                                            
Query: 719      caatgaggccatctatgacatctgtcgtagaaacctcgatattgaacgcccaacctacac 778
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15557537 caatgaggccatctatgacatctgtcgtagaaacctcgatattgaacgcccaacctacac 15557478

                                                                            
Query: 779      taacctgaataggttgataggtcagattgtgtcctccatcactgcttccctgaggtttga 838
                ||| |||||  |  | ||  | || |||||||||||||||||||||||||||||||||||
Sbjct: 15557477 taatctgaaccgccttattagccaaattgtgtcctccatcactgcttccctgaggtttga 15557418

                                                                            
Query: 839      tggggccctgaatgttgatctgacagaattccagaccaacctggtgccctatccccgcat 898
                |||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 15557417 tggggccctgaacgttgatctgacagaattccagaccaacctggtgccctacccccgcat 15557358

                                                                            
Query: 899      ccatttccctctggccacatatgcccctgtcatctctgctgagaaagcctaccatgaaca 958
                ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 15557357 ccatttccctctggccacatacgcccctgtcatctctgctgagaaagcctaccatgaaca 15557298

                                                                            
Query: 959      gctttctgtagcagagatcaccaatgcttgctttgagccagccaaccagatggtgaaatg 1018
                ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 15557297 gctttctgtagcagagatcactaatgcttgctttgagccagccaaccagatggtgaaatg 15557238

                                                                            
Query: 1019     tgaccctcgccatggtaaatacatggcctgctgcctgttgtaccgtggtgacgtggttcc 1078
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15557237 tgaccctcgccatggtaaatacatggcctgctgcctgttgtaccgtggtgacgtggttcc 15557178

                                                                            
Query: 1079     caaagacgtcaatgccgccatcgccaccatcaagaccaagcgtaccatccagtttgtgga 1138
                ||||||||||||||| ||||| |||||||||||||||||||| | |||||||||||||||
Sbjct: 15557177 caaagacgtcaatgctgccattgccaccatcaagaccaagcgcagcatccagtttgtgga 15557118

                                                                            
Query: 1139     ctggtgccccactggcttcaaggttggcattaattaccagccccccactgtggtccccgg 1198
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 15557117 ctggtgccccactggcttcaaggttggcattaattaccagccccccactgtggtccctgg 15557058

                                                                            
Query: 1199     tggagacctggccaaagtacagcgggcagtgtgcatgctgagcaacaccacagccatcgc 1258
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15557057 tggagacctggccaaagtacagcgggcagtgtgcatgctgagcaacaccacagccatcgc 15556998

                                                                            
Query: 1259     tgaggcctgggctcgcctggaccacaagtttgacctgatgtatgccaagcgtgcctttgt 1318
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15556997 tgaggcctgggctcgcctggaccacaagtttgacctgatgtatgccaagcgtgcctttgt 15556938

                                                                            
Query: 1319     tcactggtacgtgggtgagggcatggaggaaggagagttttctgaggcccgtgaggacat 1378
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15556937 tcactggtacgtgggtgagggcatggaggaaggagagttttctgaggcccgtgaggacat 15556878

                                                                            
Query: 1379     ggctgcccttgagaaggattacgaggaggttggtgtggattctgttgaaagagagggaga 1438
                ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 15556877 ggctgcccttgagaaggattacgaggaggttggtgtggattctgttgaaggagagggaga 15556818

                                      
Query: 1439     gggaaaaggcgaggaatactaa 1460
                || | |||||||||||||||||
Sbjct: 15556817 ggaagaaggcgaggaatactaa 15556796



 Score = 1691 bits (853), Expect = 0.0
 Identities = 913/933 (97%)
 Strand = Plus / Plus

                                                                            
Query: 479      ggctgaccagtgcacaggtcttcagggcttcttggttttccacagctttggcgggggaac 538
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15675141 ggctgaccagtgcacaggtcttcagggcttcttggttttccacagctttggcgggggaac 15675200

                                                                            
Query: 539      gggttctgggttcacctccctgctgatggaacgtctctctgtcgattatggcaagaagtc 598
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15675201 gggttctgggttcacctccctgctgatggaacgtctctctgtcgattatggcaagaagtc 15675260

                                                                            
Query: 599      caagctggagttctccatttacccagccccccaggtttccacagctgtagttgagcccta 658
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15675261 caagctggagttctccatttacccagccccccaggtttccacagctgtagttgagcccta 15675320

                                                                            
Query: 659      caactccatcctcaccacccacaccaccctggagcactctgattgtgccttcatggtaga 718
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15675321 caactccatcctcaccacccacaccaccctggagcactctgattgtgccttcatggtaga 15675380

                                                                            
Query: 719      caatgaggccatctatgacatctgtcgtagaaacctcgatattgaacgcccaacctacac 778
                ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 15675381 caatgaggccatctacgacatctgtcgtagaaaccttgatattgaacgcccaacctacac 15675440

                                                                            
Query: 779      taacctgaataggttgataggtcagattgtgtcctccatcactgcttccctgaggtttga 838
                ||| |||||  |  | ||  | || |||||||||||||||||||||||||||||||||||
Sbjct: 15675441 taatctgaaccgcctcatgagccaaattgtgtcctccatcactgcttccctgaggtttga 15675500

                                                                            
Query: 839      tggggccctgaatgttgatctgacagaattccagaccaacctggtgccctatccccgcat 898
                ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 15675501 tggggccctgaatgttgatctgacagaattccagaccaacctggtgccctacccccgcat 15675560

                                                                            
Query: 899      ccatttccctctggccacatatgcccctgtcatctctgctgagaaagcctaccatgaaca 958
                ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 15675561 ccatttccctctggccacatacgcccccgtcatctctgctgagaaagcctaccatgaaca 15675620

                                                                            
Query: 959      gctttctgtagcagagatcaccaatgcttgctttgagccagccaaccagatggtgaaatg 1018
                |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 15675621 gcttactgtagcagagatcactaatgcttgctttgagccagccaaccagatggtgaaatg 15675680

                                                                            
Query: 1019     tgaccctcgccatggtaaatacatggcctgctgcctgttgtaccgtggtgacgtggttcc 1078
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15675681 tgaccctcgccatggtaaatacatggcctgctgcctgttgtaccgtggtgacgtggttcc 15675740

                                                                            
Query: 1079     caaagacgtcaatgccgccatcgccaccatcaagaccaagcgtaccatccagtttgtgga 1138
                |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 15675741 caaagacgtcaatgccgccatcgccaccatcaagaccaagcgcagcatccagtttgtgga 15675800

                                                                            
Query: 1139     ctggtgccccactggcttcaaggttggcattaattaccagccccccactgtggtccccgg 1198
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 15675801 ctggtgccccactggcttcaaggttggcattaattaccagccccccactgtggtccctgg 15675860

                                                                            
Query: 1199     tggagacctggccaaagtacagcgggcagtgtgcatgctgagcaacaccacagccatcgc 1258
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15675861 tggagacctggccaaagtacagcgggcagtgtgcatgctgagcaacaccacagccatcgc 15675920

                                                                            
Query: 1259     tgaggcctgggctcgcctggaccacaagtttgacctgatgtatgccaagcgtgcctttgt 1318
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15675921 tgaggcctgggctcgcctggaccacaagtttgacctgatgtatgccaagcgtgcctttgt 15675980

                                                                            
Query: 1319     tcactggtacgtgggtgagggcatggaggaaggagagttttctgaggcccgtgaggacat 1378
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15675981 tcactggtacgtgggtgagggcatggaggaaggagagttttctgaggcccgtgaggacat 15676040

                                                 
Query: 1379     ggctgcccttgagaaggattacgaggaggttgg 1411
                |||||||||||||||||||||||||||||||||
Sbjct: 15676041 ggctgcccttgagaaggattacgaggaggttgg 15676073



 Score =  846 bits (427), Expect = 0.0
 Identities = 571/619 (92%), Gaps = 15/619 (2%)
 Strand = Plus / Minus

                                                                            
Query: 839      tggggccctgaatgttgatctgacagaattccagaccaacctggtgccctatccccgcat 898
                ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 23375374 tggggccctgaatgttgatctgacagaattccagaccaatctggtgccctacccccgcat 23375315

                                                                            
Query: 899      ccatttccctctggccacatatgcccctgtcatctctgctgagaaagcctaccatgaaca 958
                ||||||| ||||||||||||| |||||||      ||| |        |||||| |||| 
Sbjct: 23375314 ccatttctctctggccacatacgcccctg------ctgtt--------ctaccaggaacg 23375269

                                                                            
Query: 959      gctttctgtagcagagatcaccaatgcttgctttgagccagccaaccagatggtgaaatg 1018
                ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 23375268 gctttctgtagcagagatcactaatgcttgctttgagccagccaaccagatggtgaaatg 23375209

                                                                            
Query: 1019     tgaccctcgccatggtaaatacatggcctgctgcctgttgtaccgtggtgacgtggttcc 1078
                 ||||||| ||||||||||||||||||||| ||||| ||||||| |||||||||||||||
Sbjct: 23375208 cgaccctcaccatggtaaatacatggcctgatgcctattgtaccatggtgacgtggttcc 23375149

                                                                            
Query: 1079     caaagacgtcaatgccgccatcgccaccatcaagaccaagcgtaccatccagtttgtgga 1138
                ||||||| ||||||||||||| |||||||||||||||||||| | |||||||||||||||
Sbjct: 23375148 caaagacatcaatgccgccattgccaccatcaagaccaagcgcagcatccagtttgtgga 23375089

                                                                            
Query: 1139     ctggtgccccactggcttcaaggttggcattaattaccagccccccactgtggtccccgg 1198
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||  || |
Sbjct: 23375088 ctggtgccccactggcttcaaggttggcattaattaccagccccccactgtggtggcctg 23375029

                                                                            
Query: 1199     t-ggagacctggccaaagtacagcgggcagtgtgcatgctgagcaacaccacagccatcg 1257
                  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23375028 acggagacctggccaaagtacagcgggcagtgtgcatgctgagcaacaccacagccatcg 23374969

                                                                            
Query: 1258     ctgaggcctgggctcgcctggaccacaagtttgacctgatgtatgccaagcgtgcctttg 1317
                |||||| ||||||| ||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 23374968 ctgaggactgggcttgcctggaccacaagtttgacctgatgtatgccaagtgtgcctttg 23374909

                                                                            
Query: 1318     ttcactggtacgtgggtgagggcatggaggaaggagagttttctgaggcccgtgaggaca 1377
                |||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23374908 ttcactagtatgtgggtgagggcatggaggaaggagagttttctgaggcccgtgaggaca 23374849

                                                                            
Query: 1378     tggctgcccttgagaaggattacgaggaggttggtgtggattctgttgaaagagagggag 1437
                |||||||||||||||||||||| ||| ||||||||| ||||||||||||  |||||||||
Sbjct: 23374848 tggctgcccttgagaaggattatgagaaggttggtgaggattctgttgagggagagggag 23374789

                                   
Query: 1438     agggaaaaggcgaggaata 1456
                ||| | |||||||||||||
Sbjct: 23374788 aggaagaaggcgaggaata 23374770



 Score =  846 bits (427), Expect = 0.0
 Identities = 571/619 (92%), Gaps = 15/619 (2%)
 Strand = Plus / Minus

                                                                            
Query: 839      tggggccctgaatgttgatctgacagaattccagaccaacctggtgccctatccccgcat 898
                ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 23553189 tggggccctgaatgttgatctgacagaattccagaccaatctggtgccctacccccgcat 23553130

                                                                            
Query: 899      ccatttccctctggccacatatgcccctgtcatctctgctgagaaagcctaccatgaaca 958
                ||||||| ||||||||||||| |||||||      ||| |        |||||| |||| 
Sbjct: 23553129 ccatttctctctggccacatacgcccctg------ctgtt--------ctaccaggaacg 23553084

                                                                            
Query: 959      gctttctgtagcagagatcaccaatgcttgctttgagccagccaaccagatggtgaaatg 1018
                ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 23553083 gctttctgtagcagagatcactaatgcttgctttgagccagccaaccagatggtgaaatg 23553024

                                                                            
Query: 1019     tgaccctcgccatggtaaatacatggcctgctgcctgttgtaccgtggtgacgtggttcc 1078
                 ||||||| ||||||||||||||||||||| ||||| ||||||| |||||||||||||||
Sbjct: 23553023 cgaccctcaccatggtaaatacatggcctgatgcctattgtaccatggtgacgtggttcc 23552964

                                                                            
Query: 1079     caaagacgtcaatgccgccatcgccaccatcaagaccaagcgtaccatccagtttgtgga 1138
                ||||||| ||||||||||||| |||||||||||||||||||| | |||||||||||||||
Sbjct: 23552963 caaagacatcaatgccgccattgccaccatcaagaccaagcgcagcatccagtttgtgga 23552904

                                                                            
Query: 1139     ctggtgccccactggcttcaaggttggcattaattaccagccccccactgtggtccccgg 1198
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||  || |
Sbjct: 23552903 ctggtgccccactggcttcaaggttggcattaattaccagccccccactgtggtggcctg 23552844

                                                                            
Query: 1199     t-ggagacctggccaaagtacagcgggcagtgtgcatgctgagcaacaccacagccatcg 1257
                  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23552843 acggagacctggccaaagtacagcgggcagtgtgcatgctgagcaacaccacagccatcg 23552784

                                                                            
Query: 1258     ctgaggcctgggctcgcctggaccacaagtttgacctgatgtatgccaagcgtgcctttg 1317
                |||||| ||||||| ||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 23552783 ctgaggactgggcttgcctggaccacaagtttgacctgatgtatgccaagtgtgcctttg 23552724

                                                                            
Query: 1318     ttcactggtacgtgggtgagggcatggaggaaggagagttttctgaggcccgtgaggaca 1377
                |||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23552723 ttcactagtatgtgggtgagggcatggaggaaggagagttttctgaggcccgtgaggaca 23552664

                                                                            
Query: 1378     tggctgcccttgagaaggattacgaggaggttggtgtggattctgttgaaagagagggag 1437
                |||||||||||||||||||||| ||| ||||||||| ||||||||||||  |||||||||
Sbjct: 23552663 tggctgcccttgagaaggattatgagaaggttggtgaggattctgttgagggagagggag 23552604

                                   
Query: 1438     agggaaaaggcgaggaata 1456
                ||| | |||||||||||||
Sbjct: 23552603 aggaagaaggcgaggaata 23552585



 Score =  444 bits (224), Expect = e-122
 Identities = 224/224 (100%)
 Strand = Plus / Minus

                                                                            
Query: 107      gcgtgagtgcatctccatccacgttggccaagctggtgtccagatcggcaatgcctgctg 166
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15558559 gcgtgagtgcatctccatccacgttggccaagctggtgtccagatcggcaatgcctgctg 15558500

                                                                            
Query: 167      ggagctctactgcctggaacacggcatccagcccgatggccagatgccgagtgacaagac 226
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15558499 ggagctctactgcctggaacacggcatccagcccgatggccagatgccgagtgacaagac 15558440

                                                                            
Query: 227      cattgggggaggagatgactccttcaacaccttcttcagtgagacaggcgctggcaagca 286
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15558439 cattgggggaggagatgactccttcaacaccttcttcagtgagacaggcgctggcaagca 15558380

                                                            
Query: 287      tgtgcccagggcagtgtttgtagacctggaacccacagtcattg 330
                ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15558379 tgtgcccagggcagtgtttgtagacctggaacccacagtcattg 15558336



 Score =  444 bits (224), Expect = e-122
 Identities = 224/224 (100%)
 Strand = Plus / Minus

                                                                            
Query: 107      gcgtgagtgcatctccatccacgttggccaagctggtgtccagatcggcaatgcctgctg 166
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15594415 gcgtgagtgcatctccatccacgttggccaagctggtgtccagatcggcaatgcctgctg 15594356

                                                                            
Query: 167      ggagctctactgcctggaacacggcatccagcccgatggccagatgccgagtgacaagac 226
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15594355 ggagctctactgcctggaacacggcatccagcccgatggccagatgccgagtgacaagac 15594296

                                                                            
Query: 227      cattgggggaggagatgactccttcaacaccttcttcagtgagacaggcgctggcaagca 286
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15594295 cattgggggaggagatgactccttcaacaccttcttcagtgagacaggcgctggcaagca 15594236

                                                            
Query: 287      tgtgcccagggcagtgtttgtagacctggaacccacagtcattg 330
                ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15594235 tgtgcccagggcagtgtttgtagacctggaacccacagtcattg 15594192



 Score =  440 bits (222), Expect = e-120
 Identities = 552/662 (83%)
 Strand = Plus / Plus

                                                                            
Query: 501      cagggcttcttggttttccacagctttggcgggggaacgggttctgggttcacctccctg 560
                ||||||||| || | |||||||| ||||| ||||| || || ||||| ||||| || |||
Sbjct: 72522876 cagggcttcctgatcttccacagttttggggggggcaccggctctggcttcacttctctg 72522935

                                                                            
Query: 561      ctgatggaacgtctctctgtcgattatggcaagaagtccaagctggagttctccatttac 620
                ||||||||||| |||||  | ||||| ||||||||||||||||| |||||  |||| |||
Sbjct: 72522936 ctgatggaacgcctctccctggattacggcaagaagtccaagctagagtttgccatctac 72522995

                                                                            
Query: 621      ccagccccccaggtttccacagctgtagttgagccctacaactccatcctcaccacccac 680
                || || |||||||| ||||| || || || || ||||||||||||||||| |||||||||
Sbjct: 72522996 ccggcaccccaggtctccacggccgtggtggaaccctacaactccatcctgaccacccac 72523055

                                                                            
Query: 681      accaccctggagcactctgattgtgccttcatggtagacaatgaggccatctatgacatc 740
                ||||||||||| || || || |||||||||||||| ||||| ||||||||||| ||||||
Sbjct: 72523056 accaccctggaacattcagactgtgccttcatggtggacaacgaggccatctacgacatc 72523115

                                                                            
Query: 741      tgtcgtagaaacctcgatattgaacgcccaacctacactaacctgaataggttgataggt 800
                || || || ||||| || || || ||||| |||||||| ||||| ||  |  | ||  | 
Sbjct: 72523116 tgccgcaggaacctggacatcgagcgccccacctacaccaacctcaaccgcctcatcagc 72523175

                                                                            
Query: 801      cagattgtgtcctccatcactgcttccctgaggtttgatggggccctgaatgttgatctg 860
                ||||| |||||||||||||| || |||||| | |||||||||||||| || || || |||
Sbjct: 72523176 cagatcgtgtcctccatcaccgcctccctgcgctttgatggggccctcaacgtggacctg 72523235

                                                                            
Query: 861      acagaattccagaccaacctggtgccctatccccgcatccatttccctctggccacatat 920
                || || ||||||||||||||||||||||| ||||||||||| ||||| |||| ||| || 
Sbjct: 72523236 accgagttccagaccaacctggtgccctacccccgcatccacttccccctggtcacctac 72523295

                                                                            
Query: 921      gcccctgtcatctctgctgagaaagcctaccatgaacagctttctgtagcagagatcacc 980
                || ||  |||||||||||||||| |||||||| || ||||| ||||| || |||||||||
Sbjct: 72523296 gcacccatcatctctgctgagaaggcctaccacgagcagctctctgtggctgagatcacc 72523355

                                                                            
Query: 981      aatgcttgctttgagccagccaaccagatggtgaaatgtgaccctcgccatggtaaatac 1040
                |   | |||||||||||   || |||||||||||| ||||| || || ||||| || |||
Sbjct: 72523356 agctcctgctttgagcccaacagccagatggtgaagtgtgatccccgtcatggcaagtac 72523415

                                                                            
Query: 1041     atggcctgctgcctgttgtaccgtggtgacgtggttcccaaagacgtcaatgccgccatc 1100
                |||||||||||| || | ||||| || |||||||| ||||| |||||||| | |||||| 
Sbjct: 72523416 atggcctgctgcatgctctaccggggggacgtggtgcccaaggacgtcaacgtcgccatt 72523475

                                                                            
Query: 1101     gccaccatcaagaccaagcgtaccatccagtttgtggactggtgccccactggcttcaag 1160
                ||| |||||||||||||| | |||||||||||||| |||||||| ||||| |||||||||
Sbjct: 72523476 gccgccatcaagaccaagaggaccatccagtttgtagactggtgtcccacaggcttcaag 72523535

                  
Query: 1161     gt 1162
                ||
Sbjct: 72523536 gt 72523537



 Score =  436 bits (220), Expect = e-119
 Identities = 223/224 (99%)
 Strand = Plus / Plus

                                                                            
Query: 107      gcgtgagtgcatctccatccacgttggccaagctggtgtccagatcggcaatgcctgctg 166
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15672306 gcgtgagtgcatctccatccacgttggccaagctggtgtccagatcggcaatgcctgctg 15672365

                                                                            
Query: 167      ggagctctactgcctggaacacggcatccagcccgatggccagatgccgagtgacaagac 226
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15672366 ggagctctactgcctggaacacggcatccagcccgatggccagatgccgagtgacaagac 15672425

                                                                            
Query: 227      cattgggggaggagatgactccttcaacaccttcttcagtgagacaggcgctggcaagca 286
                |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 15672426 cattgggggaggagatgactccttcaacaccttcttcagtgagacaggagctggcaagca 15672485

                                                            
Query: 287      tgtgcccagggcagtgtttgtagacctggaacccacagtcattg 330
                ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15672486 tgtgcccagggcagtgtttgtagacctggaacccacagtcattg 15672529



 Score =  299 bits (151), Expect = 2e-78
 Identities = 151/151 (100%)
 Strand = Plus / Minus

                                                                            
Query: 330      gatgaagttcgcactggcacctaccgccagctcttccaccctgagcagctcatcacaggc 389
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15558187 gatgaagttcgcactggcacctaccgccagctcttccaccctgagcagctcatcacaggc 15558128

                                                                            
Query: 390      aaggaagatgctgccaataactatgcccgaggtcactacaccattggcaaggagatcatt 449
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15558127 aaggaagatgctgccaataactatgcccgaggtcactacaccattggcaaggagatcatt 15558068

                                               
Query: 450      gacctcgtcttggaccgaattcggaaactgg 480
                |||||||||||||||||||||||||||||||
Sbjct: 15558067 gacctcgtcttggaccgaattcggaaactgg 15558037



 Score =  299 bits (151), Expect = 2e-78
 Identities = 151/151 (100%)
 Strand = Plus / Minus

                                                                            
Query: 330      gatgaagttcgcactggcacctaccgccagctcttccaccctgagcagctcatcacaggc 389
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15594043 gatgaagttcgcactggcacctaccgccagctcttccaccctgagcagctcatcacaggc 15593984

                                                                            
Query: 390      aaggaagatgctgccaataactatgcccgaggtcactacaccattggcaaggagatcatt 449
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15593983 aaggaagatgctgccaataactatgcccgaggtcactacaccattggcaaggagatcatt 15593924

                                               
Query: 450      gacctcgtcttggaccgaattcggaaactgg 480
                |||||||||||||||||||||||||||||||
Sbjct: 15593923 gacctcgtcttggaccgaattcggaaactgg 15593893



 Score =  299 bits (151), Expect = 2e-78
 Identities = 151/151 (100%)
 Strand = Plus / Plus

                                                                            
Query: 330      gatgaagttcgcactggcacctaccgccagctcttccaccctgagcagctcatcacaggc 389
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15672678 gatgaagttcgcactggcacctaccgccagctcttccaccctgagcagctcatcacaggc 15672737

                                                                            
Query: 390      aaggaagatgctgccaataactatgcccgaggtcactacaccattggcaaggagatcatt 449
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15672738 aaggaagatgctgccaataactatgcccgaggtcactacaccattggcaaggagatcatt 15672797

                                               
Query: 450      gacctcgtcttggaccgaattcggaaactgg 480
                |||||||||||||||||||||||||||||||
Sbjct: 15672798 gacctcgtcttggaccgaattcggaaactgg 15672828



 Score =  268 bits (135), Expect = 9e-69
 Identities = 219/247 (88%)
 Strand = Plus / Plus

                                                                            
Query: 1159     aggttggcattaattaccagccccccactgtggtccccggtggagacctggccaaagtac 1218
                |||| ||||| || ||||||||||| || ||||| || || |||||||||||||| || |
Sbjct: 72526912 aggtgggcatcaactaccagcccccgacggtggtgccagggggagacctggccaaggtgc 72526971

                                                                            
Query: 1219     agcgggcagtgtgcatgctgagcaacaccacagccatcgctgaggcctgggctcgcctgg 1278
                ||||||| ||||||||||||||||||||||| |||||||| ||||||||||| |||||||
Sbjct: 72526972 agcgggccgtgtgcatgctgagcaacaccacggccatcgcggaggcctgggcccgcctgg 72527031

                                                                            
Query: 1279     accacaagtttgacctgatgtatgccaagcgtgcctttgttcactggtacgtgggtgagg 1338
                |||||||||| ||||||||||| |||||||||||||| || |||||||| || || ||||
Sbjct: 72527032 accacaagttcgacctgatgtacgccaagcgtgccttcgtgcactggtatgtcggcgagg 72527091

                                                                            
Query: 1339     gcatggaggaaggagagttttctgaggcccgtgaggacatggctgcccttgagaaggatt 1398
                | ||||| |||||||| |||||||||||||| |||||| |||||||||| ||||||||||
Sbjct: 72527092 ggatggaagaaggagaattttctgaggcccgggaggacctggctgccctggagaaggatt 72527151

                       
Query: 1399     acgagga 1405
                | |||||
Sbjct: 72527152 atgagga 72527158



 Score =  194 bits (98), Expect = 1e-46
 Identities = 101/102 (99%)
 Strand = Plus / Minus

                                                                            
Query: 6        gtgcggcaggttctcttacatcgaccgcttaagagtcgcgctgtaagaagcaacaacctc 65
                |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15596564 gtgccgcaggttctcttacatcgaccgcttaagagtcgcgctgtaagaagcaacaacctc 15596505

                                                          
Query: 66       tcttctccgccatctgctcggcgccgcaaaacagcaactatg 107
                ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15596504 tcttctccgccatctgctcggcgccgcaaaacagcaactatg 15596463



 Score =  103 bits (52), Expect = 3e-19
 Identities = 76/84 (90%)
 Strand = Plus / Plus

                                                                            
Query: 114      tgcatctccatccacgttggccaagctggtgtccagatcggcaatgcctgctgggagctc 173
                ||||| ||| ||||||| |||||||| || || |||||||||||||||||||||||||||
Sbjct: 72519106 tgcatatccgtccacgtgggccaagccggggttcagatcggcaatgcctgctgggagctc 72519165

                                        
Query: 174      tactgcctggaacacggcatccag 197
                | ||||||||| ||||||||||||
Sbjct: 72519166 ttctgcctggagcacggcatccag 72519189



 Score = 89.7 bits (45), Expect = 4e-15
 Identities = 84/97 (86%)
 Strand = Plus / Plus

                                                                            
Query: 348      acctaccgccagctcttccaccctgagcagctcatcacaggcaaggaagatgctgccaat 407
                |||||||||||||||||||| || |||||||| |||||||| || || ||||| ||||| 
Sbjct: 72520765 acctaccgccagctcttccatccagagcagctgatcacaggaaaagaggatgcagccaac 72520824

                                                     
Query: 408      aactatgcccgaggtcactacaccattggcaaggaga 444
                ||||||||||| || ||||||||  | ||||||||||
Sbjct: 72520825 aactatgcccggggccactacacagtgggcaaggaga 72520861


>Sscrofa_Chr13 
||          Length = 218635234

 Score = 1405 bits (709), Expect = 0.0
 Identities = 1174/1332 (88%), Gaps = 39/1332 (2%)
 Strand = Plus / Minus

                                                                             
Query: 109       gtgagtgcatctccatccacgttggccaagctggtgtccagatcggcaatgcctgctggg 168
                 ||||||||||||| |||||| ||||||||||||||||||||||| ||| |||||||||||
Sbjct: 106118414 gtgagtgcatctctatccacattggccaagctggtgtccagatcagcagtgcctgctggg 106118355

                                                                             
Query: 169       agctctactgcctggaacacggcatccagcccgatggccagatgccgagtgacaagacca 228
                 |||| ||||||||||||||                     ||| || ||| |||||||| 
Sbjct: 106118354 agctatactgcctggaaca---------------------gataccaagtaacaagaccc 106118316

                                                                             
Query: 229       ttgggggaggagatgactccttcaacaccttcttca-gtgagacaggcgctggcaagcat 287
                  ||||||||||||||||||||||||||||||||| | |||||| ||| ||||||||||||
Sbjct: 106118315 ctgggggaggagatgactccttcaacaccttctttaagtgagataggagctggcaagcat 106118256

                                                                             
Query: 288       gtgcccagggcagtgtttgtagacctggaacccacagtcattgatgaagttcgcactggc 347
                 ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 106118255 gtgcccagggcag-gtttgtagacctggaacccacagtcattgatgaagttagcactggc 106118197

                                                                             
Query: 348       acctaccgccagctcttccaccctgagcagctcatcacaggcaaggaagatgctgccaat 407
                 |||||| ||| |||||||||||||||||||||||||||||||||  ||||||||||||||
Sbjct: 106118196 acctactgcctgctcttccaccctgagcagctcatcacaggcaaaaaagatgctgccaat 106118137

                                                                             
Query: 408       aactatgcccgaggtcactacaccattggcaaggagatcattgacctcgtcttggaccga 467
                 |||||| || || |||||||  |||||||||||||||||||||||||| ||||||||| |
Sbjct: 106118136 aactattccagaagtcactatcccattggcaaggagatcattgacctcatcttggaccca 106118077

                                                                             
Query: 468       attcggaaactggctgaccagtgcacaggtcttcagggcttcttggttttccacagcttt 527
                  ||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106118076 gttcagaa-ctggctgaccagtgcacaggtcttcagggcttcttggttttccacagcttt 106118018

                                                                             
Query: 528       ggcgggggaa-cgggttctgggttcacctccctgctgatggaacgtctctctgtcgatta 586
                 ||  |||||| | ||||||||||||||||| ||||||||||||||| |||||||||||||
Sbjct: 106118017 ggttggggaaactggttctgggttcacctctctgctgatggaacgtttctctgtcgatta 106117958

                                                                             
Query: 587       tggcaagaagtccaagctggagttctccatttacccagccccccaggtttccacagctgt 646
                 ||| || |||||||||||||| |||||||||||  |||||||| ||||||||||||||||
Sbjct: 106117957 tgggaataagtccaagctggaattctccatttattcagccccctaggtttccacagctgt 106117898

                                                                             
Query: 647       agttgagccctacaactccatcctcaccacccacaccaccctggagcactctgattgtgc 706
                 || |||||| ||||  |||||||| ||||||||||||||| ||||| |||||||||||||
Sbjct: 106117897 aggtgagccttacatttccatccttaccacccacaccaccgtggagaactctgattgtgc 106117838

                                                                             
Query: 707       cttcatggtagacaatgaggccatctatgacatctgtcgtagaaacctcgatattgaacg 766
                 ||||||||||||||||||||||||||||||||||| || ||||||||| |||||||| | 
Sbjct: 106117837 cttcatggtagacaatgaggccatctatgacatctttcatagaaaccttgatattgagca 106117778

                                                                             
Query: 767       cccaacctacactaacctgaataggttgataggtcagattgtgtcctccatcactgcttc 826
                 |||| |||||||||  |||||     | ||  | ||||||||||||||||||||||||||
Sbjct: 106117777 cccatcctacactactctgaaccacctcattagccagattgtgtcctccatcactgcttc 106117718

                                                                             
Query: 827       cctgaggtttgatggggccctgaatgttgatctgacagaattccagaccaacctggtgcc 886
                  |||||||||||||| ||| |||||||||||||||||||||||||||||| | || ||||
Sbjct: 106117717 tctgaggtttgatggagccatgaatgttgatctgacagaattccagaccagcttgttgcc 106117658

                                                                             
Query: 887       ctatccccgcatccatttccctctggccacatatgcccctgtcatctctgctgagaaagc 946
                 |||  || ||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 106117657 ctactcctgcatccatttccctctggccacatatgcccctgtcatctctgctgagaaagt 106117598

                                                                             
Query: 947       ctaccatgaacagctttctgtagcagagatcaccaatgcttgctttgagccagccaacca 1006
                 |||              |||||||||||||||||||||||||||||  ||||||||||||
Sbjct: 106117597 cta--------------ctgtagcagagatcaccaatgcttgctttaggccagccaacca 106117552

                                                                             
Query: 1007      gatggtgaaatgtgaccctcgccatggtaaatacatggcctgctgcctgttgtaccgtgg 1066
                 ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106117551 gatggtgaaatttgatcctcgccatggtaaatacatggcctgctgcctgttgtaccgtgg 106117492

                                                                             
Query: 1067      tgacgtggttcccaaagacgtcaatgccgccatcgccaccatcaagaccaagcgtaccat 1126
                  | |  ||||||| |||| ||||||||| |||| |||||||| ||||||||||  | |||
Sbjct: 106117491 cgtcacggttcccgaagaagtcaatgccaccattgccaccataaagaccaagcacagcat 106117432

                                                                             
Query: 1127      ccagtttgtggactggtgccccactggcttcaaggttggcattaattaccagccccccac 1186
                  |||||||||||||||||||||| |||||| || | ||||||| || ||||||| |||||
Sbjct: 106117431 tcagtttgtggactggtgccccaatggcttaaaagctggcattgataaccagccacccac 106117372

                                                                             
Query: 1187      tgtggtccccggtggagacctggccaaagtacagcgggcagtgtgcatgctgagcaacac 1246
                 |||||||||  ||||||| ||||| ||||||||| |||| |||||| |||||||||||||
Sbjct: 106117371 tgtggtcccttgtggagatctggcaaaagtacagagggctgtgtgcgtgctgagcaacac 106117312

                                                                             
Query: 1247      cacagccatcgctgaggcctgggctcgcctggaccacaagtttgacctgatgtatgccaa 1306
                 ||||||||||  |||| ||||||||| |||||||||||||||||||||||  ||||||||
Sbjct: 106117311 cacagccatcaatgagacctgggctcacctggaccacaagtttgacctgacatatgccaa 106117252

                                                                             
Query: 1307      gcgtgcctttgttcactggtacgtgggtgagggcatggaggaaggagagttttctgaggc 1366
                 || ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 106117251 gcatgcctttgttcgctggtacgtggatgagggcatggaggaaggagagttttctgaggc 106117192

                                                                             
Query: 1367      ccgtgaggacatggctgcccttgagaaggattacgaggaggttggtgtggattctgttga 1426
                 | || || ||||||||||||||||||||||||| ||| ||||||||||||||||||||||
Sbjct: 106117191 cagtaagaacatggctgcccttgagaaggattatgagtaggttggtgtggattctgttga 106117132

                             
Query: 1427      aagagagggaga 1438
                   ||||||||||
Sbjct: 106117131 gggagagggaga 106117120



 Score = 1398 bits (705), Expect = 0.0
 Identities = 1173/1332 (88%), Gaps = 39/1332 (2%)
 Strand = Plus / Minus

                                                                             
Query: 109       gtgagtgcatctccatccacgttggccaagctggtgtccagatcggcaatgcctgctggg 168
                 ||||||||||||| |||||| ||||||||||||||||||||||| ||| |||||||||||
Sbjct: 105966848 gtgagtgcatctctatccacattggccaagctggtgtccagatcagcagtgcctgctggg 105966789

                                                                             
Query: 169       agctctactgcctggaacacggcatccagcccgatggccagatgccgagtgacaagacca 228
                 |||| ||||||||||||||                     ||| || ||| |||||||| 
Sbjct: 105966788 agctatactgcctggaaca---------------------gataccaagtaacaagaccc 105966750

                                                                             
Query: 229       ttgggggaggagatgactccttcaacaccttcttca-gtgagacaggcgctggcaagcat 287
                  ||||||||||||||||||||||||||||||||| | |||||| ||| ||||||||||||
Sbjct: 105966749 ctgggggaggagatgactccttcaacaccttctttaagtgagataggagctggcaagcat 105966690

                                                                             
Query: 288       gtgcccagggcagtgtttgtagacctggaacccacagtcattgatgaagttcgcactggc 347
                 ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 105966689 gtgcccagggcag-gtttgtagacctggaacccacagtcattgatgaagttagcactggc 105966631

                                                                             
Query: 348       acctaccgccagctcttccaccctgagcagctcatcacaggcaaggaagatgctgccaat 407
                 |||||| ||| |||||||||||||||||||||||||||||||||  ||||||||||||||
Sbjct: 105966630 acctactgcctgctcttccaccctgagcagctcatcacaggcaaaaaagatgctgccaat 105966571

                                                                             
Query: 408       aactatgcccgaggtcactacaccattggcaaggagatcattgacctcgtcttggaccga 467
                 |||||| || || |||||||  |||||||||||||||||||||||||| ||||||||| |
Sbjct: 105966570 aactattccagaagtcactatcccattggcaaggagatcattgacctcatcttggaccca 105966511

                                                                             
Query: 468       attcggaaactggctgaccagtgcacaggtcttcagggcttcttggttttccacagcttt 527
                  ||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105966510 gttcagaa-ctggctgaccagtgcacaggtcttcagggcttcttggttttccacagcttt 105966452

                                                                             
Query: 528       ggcgggggaa-cgggttctgggttcacctccctgctgatggaacgtctctctgtcgatta 586
                 ||  |||||| | ||||||||||||||||| ||||||||||||||| |||||||||||||
Sbjct: 105966451 ggttggggaaactggttctgggttcacctctctgctgatggaacgtttctctgtcgatta 105966392

                                                                             
Query: 587       tggcaagaagtccaagctggagttctccatttacccagccccccaggtttccacagctgt 646
                 ||| || |||||||||||||| |||||||||||  |||||||| ||||||||||||||||
Sbjct: 105966391 tgggaataagtccaagctggaattctccatttattcagccccctaggtttccacagctgt 105966332

                                                                             
Query: 647       agttgagccctacaactccatcctcaccacccacaccaccctggagcactctgattgtgc 706
                 || |||||| ||||  |||||||| ||||||||||||||| ||||| |||||||||||||
Sbjct: 105966331 aggtgagccttacatttccatccttaccacccacaccaccgtggagaactctgattgtgc 105966272

                                                                             
Query: 707       cttcatggtagacaatgaggccatctatgacatctgtcgtagaaacctcgatattgaacg 766
                 ||||||||||||||||||||||||||||||||||| || ||||||||| |||||||| | 
Sbjct: 105966271 cttcatggtagacaatgaggccatctatgacatctttcatagaaaccttgatattgagca 105966212

                                                                             
Query: 767       cccaacctacactaacctgaataggttgataggtcagattgtgtcctccatcactgcttc 826
                 |||| |||||||||  |||||     | ||  | ||||||||||||||||||||||||||
Sbjct: 105966211 cccatcctacactactctgaaccacctcattagccagattgtgtcctccatcactgcttc 105966152

                                                                             
Query: 827       cctgaggtttgatggggccctgaatgttgatctgacagaattccagaccaacctggtgcc 886
                  |||||||||||||| ||| |||||||||||||||||||||||||||||| | || ||||
Sbjct: 105966151 tctgaggtttgatggagccatgaatgttgatctgacagaattccagaccagcttgttgcc 105966092

                                                                             
Query: 887       ctatccccgcatccatttccctctggccacatatgcccctgtcatctctgctgagaaagc 946
                 |||  || ||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 105966091 ctactcctgcatccatttccctctggccacatatgcccctgtcatctctgctgagaaagt 105966032

                                                                             
Query: 947       ctaccatgaacagctttctgtagcagagatcaccaatgcttgctttgagccagccaacca 1006
                 |||              |||||||||||||| ||||||||||||||  ||||||||||||
Sbjct: 105966031 cta--------------ctgtagcagagatccccaatgcttgctttaggccagccaacca 105965986

                                                                             
Query: 1007      gatggtgaaatgtgaccctcgccatggtaaatacatggcctgctgcctgttgtaccgtgg 1066
                 ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105965985 gatggtgaaatttgatcctcgccatggtaaatacatggcctgctgcctgttgtaccgtgg 105965926

                                                                             
Query: 1067      tgacgtggttcccaaagacgtcaatgccgccatcgccaccatcaagaccaagcgtaccat 1126
                  | |  ||||||| |||| ||||||||| |||| |||||||| ||||||||||  | |||
Sbjct: 105965925 cgtcacggttcccgaagaagtcaatgccaccattgccaccataaagaccaagcacagcat 105965866

                                                                             
Query: 1127      ccagtttgtggactggtgccccactggcttcaaggttggcattaattaccagccccccac 1186
                  |||||||||||||||||||||| |||||| || | ||||||| || ||||||| |||||
Sbjct: 105965865 tcagtttgtggactggtgccccaatggcttaaaagctggcattgataaccagccacccac 105965806

                                                                             
Query: 1187      tgtggtccccggtggagacctggccaaagtacagcgggcagtgtgcatgctgagcaacac 1246
                 |||||||||  ||||||| ||||| ||||||||| |||| |||||| |||||||||||||
Sbjct: 105965805 tgtggtcccttgtggagatctggcaaaagtacagagggctgtgtgcgtgctgagcaacac 105965746

                                                                             
Query: 1247      cacagccatcgctgaggcctgggctcgcctggaccacaagtttgacctgatgtatgccaa 1306
                 ||||||||||  |||| ||||||||| |||||||||||||||||||||||  ||||||||
Sbjct: 105965745 cacagccatcaatgagacctgggctcacctggaccacaagtttgacctgacatatgccaa 105965686

                                                                             
Query: 1307      gcgtgcctttgttcactggtacgtgggtgagggcatggaggaaggagagttttctgaggc 1366
                 || ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 105965685 gcatgcctttgttcgctggtacgtggatgagggcatggaggaaggagagttttctgaggc 105965626

                                                                             
Query: 1367      ccgtgaggacatggctgcccttgagaaggattacgaggaggttggtgtggattctgttga 1426
                 | || || ||||||||||||||||||||||||| ||| ||||||||||||||||||||||
Sbjct: 105965625 cagtaagaacatggctgcccttgagaaggattatgagtaggttggtgtggattctgttga 105965566

                             
Query: 1427      aagagagggaga 1438
                   ||||||||||
Sbjct: 105965565 gggagagggaga 105965554


>Sscrofa_Chr03 
||          Length = 144787322

 Score = 1138 bits (574), Expect = 0.0
 Identities = 781/846 (92%), Gaps = 3/846 (0%)
 Strand = Plus / Plus

                                                                             
Query: 597       tccaagctggagttctccatttacccagcccc-ccaggtttccacagctgtagttgagcc 655
                 |||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 132554009 tccaagctggagctctccatttacccagcccctccaggtttccacagctgtagttgagcc 132554068

                                                                             
Query: 656       ctacaactccatcctcaccacccacaccaccctggagcactctgattgtgccttcatggt 715
                 |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 132554069 ctacaactccatcctcaccacccacaccaccctggagcactcaggttgtgccttcatggt 132554128

                                                                             
Query: 716       agacaatgaggccatctatgacatctgtcgtagaaacctcgatattgaacgcccaaccta 775
                 || ||| |||||| ||| ||||| |||||||||||||||||||||||| |||||||||| 
Sbjct: 132554129 aggcaacgaggccgtctctgacacctgtcgtagaaacctcgatattgagcgcccaacctg 132554188

                                                                             
Query: 776       cactaacctgaataggttgataggtcagattgtgtcctccatcactgcttccctgaggtt 835
                 |||||| | |||  |  | ||  | |||||||||||||||||| ||||||||||||||||
Sbjct: 132554189 cactaatccgaaccgtcttatcagccagattgtgtcctccatcgctgcttccctgaggtt 132554248

                                                                             
Query: 836       tgatggggccctgaatgttgatctgacagaattccagaccaacctggtgccctatccccg 895
                 |||||||||  ||||||| ||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 132554249 tgatggggctttgaatgtggatctcacagaattccagaccaacctggtgccctacccccg 132554308

                                                                             
Query: 896       catccatttccctctggccacatatgcccctgtcatctctgctgagaaagcctaccatga 955
                 |||||| ||||||||||||||| ||||||||||||||||||||||||| |||||||| ||
Sbjct: 132554309 catccacttccctctggccacacatgcccctgtcatctctgctgagaa-gcctaccagga 132554367

                                                                             
Query: 956       acagctttctgtagcagagatcaccaatgcttgctttgagccagccaaccagatggtgaa 1015
                 ||||||||||||||||||| || | |||||| ||||  | ||||||||||||||||||||
Sbjct: 132554368 acagctttctgtagcagaggtcgctaatgctggcttcaaaccagccaaccagatggtgaa 132554427

                                                                             
Query: 1016      atgtgaccctcgccatggtaaatacatggcctgctgcctgttgtaccgtggtgacgtggt 1075
                 |||  |||||||||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 132554428 atgcaaccctcgccatggtaaatccatggcctgctgcctgttgtaccatggtgacgtggt 132554487

                                                                             
Query: 1076      tcccaaagacgtcaatgccgccatcgccaccatcaagaccaagcgtaccatccagtttgt 1135
                 ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct: 132554488 tcccaaagacgtcaatgccgccatcgccaccatcaagaccaagcgcagcatccagtttgt 132554547

                                                                             
Query: 1136      ggactggtgccccactggcttcaaggttggcattaattaccag-ccccccactgtggtcc 1194
                 ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| 
Sbjct: 132554548 ggactggtgccccactggcttcaaggttggcattaattaccagcccccccactgtggtct 132554607

                                                                             
Query: 1195      ccggtggagacctggccaaagtacagcgggcagtgtgcatgctgagcaacaccacagcca 1254
                 | || |||||||||||||||||||||||||| |||||||||||||||| |||  ||||||
Sbjct: 132554608 ctggcggagacctggccaaagtacagcgggctgtgtgcatgctgagcatcactgcagcca 132554667

                                                                             
Query: 1255      tcgctgaggcctgggctcgcctggaccacaagtttgacctgatgtatgccaagcgtgcct 1314
                   |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 132554668 ctgctgaggcctgggctcacctggaccacaagtttgacctgatgtatgccaagcgtgcct 132554727

                                                                             
Query: 1315      ttgttcactggtacgtgggtgagggcatggaggaaggagagttttctgaggcccgtgagg 1374
                  || ||||||||| ||||||||||||||||||||||||||||||||||||||| |||| |
Sbjct: 132554728 ctgctcactggtatgtgggtgagggcatggaggaaggagagttttctgaggcctgtgaag 132554787

                                                                             
Query: 1375      acatggctgcccttgagaaggattacgaggaggttggtgtggattctgttgaaagagagg 1434
                 ||||||||||||||||||||||||| |||||||||||| |||||||||||||  || |||
Sbjct: 132554788 acatggctgcccttgagaaggattatgaggaggttggtatggattctgttgagggaaagg 132554847

                       
Query: 1435      gagagg 1440
                 ||||||
Sbjct: 132554848 gagagg 132554853



 Score =  842 bits (425), Expect = 0.0
 Identities = 874/1018 (85%), Gaps = 18/1018 (1%)
 Strand = Plus / Plus

                                                                            
Query: 105      atgcgtgagtgcatctccatccacgttggccaagctggtgtccagatcggcaatgcctgc 164
                |||| |||||||||| |||||||||||||||| ||| ||||||||||| ||| |||||| 
Sbjct: 49835568 atgcttgagtgcatccccatccacgttggccaggctagtgtccagatcagcagtgcctgt 49835627

                                                                            
Query: 165      tgggagctctactgcctggaacacggcatccagcccgatggccagatgccgagtgacaag 224
                |||||| ||| ||||||||||||| |||||||||  ||| |||||||||| |||||||||
Sbjct: 49835628 tgggagttctcctgcctggaacacagcatccagcgtgatagccagatgccaagtgacaag 49835687

                                                                            
Query: 225      accattgggggaggagatgactccttcaacaccttcttcagtgagacaggcgctggcaag 284
                 |||||||   ||||||||||||||||| ||||||||| ||||         ||||||| 
Sbjct: 49835688 tccattgg---aggagatgactccttcagcaccttcttgagtg---------ctggcaaa 49835735

                                                                            
Query: 285      catgtgcccagggcagtgtttgtagacctggaacccacagtcattgatgaagttcgcact 344
                |  ||||||||||||||||| ||  ||||||||||| || |||||||||| ||| |||||
Sbjct: 49835736 c--gtgcccagggcagtgttagtcaacctggaaccctcaatcattgatgacgtttgcact 49835793

                                                                            
Query: 345      ggcacctaccgccagctcttccaccctgagcagctcatcacaggcaaggaagatgctgcc 404
                ||||||||| |||||||| |||||| |||||| |||||||||||||||||||||| | ||
Sbjct: 49835794 ggcacctac-gccagctcctccaccgtgagcatctcatcacaggcaaggaagatggtacc 49835852

                                                                            
Query: 405      aataactatgcccgaggtcactacaccattggcaaggagatcattgacctcgtcttggac 464
                 ||||| | ||||  |||||| |||||||||| |  |||||||||||||  |||||||||
Sbjct: 49835853 gataaccacgccccgggtcaccacaccattggtactgagatcattgaccgtgtcttggac 49835912

                                                                            
Query: 465      cgaattcggaaactggctgaccagtgcacaggtcttcagggcttcttggttttccacagc 524
                | | |   ||| |||||||||  ||||||| | || ||||||||||||||||||||||||
Sbjct: 49835913 ccagtgtagaagctggctgactggtgcacatgcctccagggcttcttggttttccacagc 49835972

                                                                            
Query: 525      tttggcgggggaacgggttctgggttcacctccctgctgatggaacgtctctctgtcgat 584
                | ||| |||||||| | |||||||||||||| |||||| |||| ||||||||||||||||
Sbjct: 49835973 tctggtgggggaactgattctgggttcaccttcctgcttatgggacgtctctctgtcgat 49836032

                                                                            
Query: 585      tatggcaagaagtccaagctggagttctccatttacccagccccccaggtttccacagct 644
                |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| |||
Sbjct: 49836033 tatggcaagaagtccaagctggaggtctccatttacccagccccccaggtttgcactgct 49836092

                                                                            
Query: 645      gtagttgagccctacaactccatcctcaccacccacaccaccctggagcactctgattgt 704
                ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||
Sbjct: 49836093 gtagttgagccctacaactccatcctctccacccacaccacccaggagcactctgattgt 49836152

                                                                            
Query: 705      gccttcatggtagacaatgaggccatctatgacatctgtcgtagaaacctcgatattgaa 764
                ||||||||||||| | |  || ||||||||||||||||| ||||||| | ||||||||| 
Sbjct: 49836153 gccttcatggtaggccacaagtccatctatgacatctgtggtagaaaacacgatattgag 49836212

                                                                            
Query: 765      cgcccaacctacactaacctgaataggttgataggtcagattgtgtcctccatcactgct 824
                |||||||||||||||   |||||     | ||  | | ||||||||||||||||||||||
Sbjct: 49836213 cgcccaacctacactcctctgaacctcgtcattag-ctgattgtgtcctccatcactgct 49836271

                                                                            
Query: 825      tccctgaggtttgatggggccctgaatgttgatctgacagaattccagaccaacctggtg 884
                |||||| |||| | ||| |||||||| |||||||||||||||| |||||||| | || ||
Sbjct: 49836272 tccctggggttgggtggagccctgaacgttgatctgacagaatgccagaccaccttgatg 49836331

                                                                            
Query: 885      ccctatccccgcatccatttccctctggccacatatgcccctgtcatctctgctgagaaa 944
                |||| || | ||||||||||||||||  |||| || | ||||||||||||||||||||||
Sbjct: 49836332 ccctgtcgctgcatccatttccctctttccactta-ggccctgtcatctctgctgagaaa 49836390

                                                                            
Query: 945      gcctaccatgaacagctttctgtagcagagatcaccaatgcttgctttgagccagccaac 1004
                ||||||||||||||||||||||||||||||||||| |||||||| || ||||||||||||
Sbjct: 49836391 gcctaccatgaacagctttctgtagcagagatcactaatgcttggttagagccagccaac 49836450

                                                                            
Query: 1005     cagatggtgaaatgtgaccctcgccatggtaaatacatggcctgctgcctgttgtaccgt 1064
                ||||||||||| | |||||||  |||||| ||| ||||||| | ||||  || |||| | 
Sbjct: 49836451 cagatggtgaagtatgacccttaccatgg-aaacacatggcttactgctggtcgtactgc 49836509

                                                                          
Query: 1065     ggtgacgtggttcccaaagacgtcaatgccgccatcgccaccatcaagaccaagcgta 1122
                   || ||| ||||||||||| || |||| |||||||||||| | |||||||||||||
Sbjct: 49836510 accgatgtgattcccaaagacatcgatgctgccatcgccacctttaagaccaagcgta 49836567



 Score =  222 bits (112), Expect = 5e-55
 Identities = 264/308 (85%), Gaps = 5/308 (1%)
 Strand = Plus / Plus

                                                                            
Query: 1110     aagaccaagcgtaccatccagtttgtggactggtgccccactggcttcaaggttggcatt 1169
                ||||||| ||||| |||||||||||||||||||| |||  ||||||||||| | ||||||
Sbjct: 49836864 aagaccaggcgtagcatccagtttgtggactggtaccctgctggcttcaag-tcggcatt 49836922

                                                                            
Query: 1170     aattaccagccccccactgtggtccccggtggagacctggccaaagtacagcgggcagtg 1229
                ||||||||||  |||||||||||||| ||||||||||||||| |||||||| |||| |||
Sbjct: 49836923 aattaccagcttcccactgtggtccctggtggagacctggcctaagtacagtgggctgtg 49836982

                                                                            
Query: 1230     tgcatgctgagcaacaccacagccatcgctgaggcctgggctcgcctggaccacaagttt 1289
                |||||| |||| |||||||||||  || ||||||||  |||| ||||||| | || ||| 
Sbjct: 49836983 tgcatgttgag-aacaccacagctgtcactgaggcccaggcttgcctggagcccaggttg 49837041

                                                                            
Query: 1290     gacctgatgtatgccaagcgtgcc-tttgttcactggtacgtgggtgagggcatggagga 1348
                |||||||||| |||||  | |||| |||||||||| |||| | ||| | |||||||||||
Sbjct: 49837042 gacctgatgtgtgccagtcatgccttttgttcact-gtacataggttaaggcatggagga 49837100

                                                                            
Query: 1349     aggagagttttctgaggcccgtgaggacatggctgcccttgagaaggattacgaggaggt 1408
                ||||| |||| || ||| || ||||||| |||||| ||||||||||||||| ||||||||
Sbjct: 49837101 aggag-gtttcctcaggtccatgaggacgtggctgtccttgagaaggattatgaggaggt 49837159

                        
Query: 1409     tggtgtgg 1416
                ||| ||||
Sbjct: 49837160 tggagtgg 49837167


>Sscrofa_Chr11 
||          Length = 87690581

 Score =  868 bits (438), Expect = 0.0
 Identities = 1046/1229 (85%), Gaps = 41/1229 (3%)
 Strand = Plus / Plus

                                                                            
Query: 203      tggccagatgccgagtgacaagaccattgggggaggagatgactccttcaacaccttctt 262
                |||||||||||| |||||||||||||||| |||| |||||||||||||||| ||||| ||
Sbjct: 32577670 tggccagatgccaagtgacaagaccattgagggaagagatgactccttcaataccttttt 32577729

                                                                            
Query: 263      cagtgaga-caggcg-ctggcaagcatgtgcccagggcagtgtttgtagacctggaaccc 320
                |||||||| |||||  ||| | ||||||| |||||||||||||||||||| ||| |||||
Sbjct: 32577730 cagtgagaacaggcaactgaccagcatgtacccagggcagtgtttgtagatctgaaaccc 32577789

                                                                            
Query: 321      acagtcattgatgaagttcgcact--ggcacctaccgccagctcttccaccctgagcagc 378
                | | ||||||||||||||| ||||  |||||||||  |||||||||||||||||||||||
Sbjct: 32577790 agaatcattgatgaagttcacactttggcacctactcccagctcttccaccctgagcagc 32577849

                                                                            
Query: 379      tcatcacaggcaaggaagatgctgccaataactatgcccgaggtcactacaccattggca 438
                |||||||||||||||||||||||| ||||||||||||| ||||||||| |||||||||||
Sbjct: 32577850 tcatcacaggcaaggaagatgctgtcaataactatgcctgaggtcacttcaccattggca 32577909

                                                                            
Query: 439      aggagatcattgacctcgtcttggaccgaattcggaaactggctgaccagtgcacaggtc 498
                ||||||||||||| || || |||||| ||||| |||||||||||||| |||||| |||||
Sbjct: 32577910 aggagatcattgatcttgtgttggactgaattgggaaactggctgacaagtgcataggtc 32577969

                                                                            
Query: 499      ttcagggcttcttggttttccacagctttggcgggggaacgggttctgggttcacctccc 558
                ||||| | ||||||| |||| |||||||  | |||| ||| ||| ||||||| |||||||
Sbjct: 32577970 ttcagtgtttcttggctttc-acagctt--gtggggaaactggt-ctgggtttacctccc 32578025

                                                                            
Query: 559      tgctgatggaacgtctctctgtcgattatggcaagaagtccaagctggagttctccattt 618
                ||| |||| ||| ||||| |||| |||| ||||| || |||| |||||| |||||  || 
Sbjct: 32578026 tgcagatg-aacatctct-tgtcaatta-ggcaaaaa-tcca-gctggaattctctgtt- 32578079

                                                                            
Query: 619      acccagccccccaggtttccacagctgtagttgagccctacaactccatcctcaccaccc 678
                ||||||||||| ||||||||||||||||| || ||||||| |||||||||||||||||||
Sbjct: 32578080 acccagccccc-aggtttccacagctgtaattaagccctataactccatcctcaccaccc 32578138

                                                                            
Query: 679      acaccaccctggagcactctgattgtgccttcatggtagacaatgaggccatctatgaca 738
                         ||||||||||||||||||  ||||| ||||||||||||||||||| |||||
Sbjct: 32578139 ---------tggagcactctgattgtgtgttcattgtagacaatgaggccatctgtgaca 32578189

                                                                            
Query: 739      tctgtcgtagaaacctcgatattgaacgcccaacctacactaacctgaataggttgatag 798
                |||||| |||||||||| || |||| | ||||  ||||||||| || ||     | ||  
Sbjct: 32578190 tctgtcatagaaacctcaattttgagcacccagtctacactaatcttaaccaccttatta 32578249

                                                                            
Query: 799      gtcagattgtgtcctccatcactgcttccctgaggtttgatggggccctgaatgttgatc 858
                | |||| ||||||||||||||||||||| ||||| |||| || | || ||||||||||  
Sbjct: 32578250 gccagactgtgtcctccatcactgcttctctgagctttggtgagacc-tgaatgttgacg 32578308

                                                                            
Query: 859      tgacagaattccagaccaacctggtgccctatccccgcatccatttccctctggccacat 918
                |||||||||||| ||||| | || |||||||||||| ||||||||||||| ||| |||||
Sbjct: 32578309 tgacagaattccggaccagcttgttgccctatccccacatccatttccctgtggtcacat 32578368

                                                                            
Query: 919      atgcccctgtcatctctgctgagaaagcctaccatgaacagctttctgtagcagagatca 978
                |||||||||||||||||||||| ||| ||||||||| ||||||| || ||||||| ||||
Sbjct: 32578369 atgcccctgtcatctctgctgaaaaa-cctaccatggacagcttgctatagcagaaatca 32578427

                                                                            
Query: 979      ccaatgcttgctttgagccagccaaccagatggtgaaatgtgaccctcgccatggtaaat 1038
                | |||||||| |||||||||||||||||||| |||||||||| ||||| ||| | | |||
Sbjct: 32578428 ctaatgcttgttttgagccagccaaccagatagtgaaatgtggccctcaccaag-tgaat 32578486

                                                                            
Query: 1039     acatggcctgctgcctgttgtaccgtggtgacgtggttcccaaagacgtcaatgccgcca 1098
                ||||||| |||| |||| ||||  ||||  | || |||| ||||||| ||||||| ||||
Sbjct: 32578487 acatggcttgctacctgctgtatagtggcaatgttgttctcaaagacatcaatgctgcca 32578546

                                                                            
Query: 1099     tcgccaccatcaagaccaagcgtaccatccagtttgtggactggtgccccactggcttca 1158
                | ||||||||||||||||| || | ||||||||||||||| ||||| |||||||||||||
Sbjct: 32578547 ttgccaccatcaagaccaatcgcagcatccagtttgtggaatggtgacccactggcttca 32578606

                                                                            
Query: 1159     aggttggcattaattaccagccccccactgtggtccccggtggagacctggccaaagtac 1218
                | |||||||||||||||||||| ||| |||||||||| ||  || |||||||||||||||
Sbjct: 32578607 aagttggcattaattaccagcctccccctgtggtccctggcagatacctggccaaagtac 32578666

                                                                            
Query: 1219     agcgggcagtgtgcatgctgagcaacaccacagccatcgctgaggcctgggctcgcctgg 1278
                || || | |||||| ||||||||||||||||||||||||||||||||||||||| || | 
Sbjct: 32578667 agtggtctgtgtgcgtgctgagcaacaccacagccatcgctgaggcctgggctcaccag- 32578725

                                                                            
Query: 1279     accacaagtttgacctgatgtatgccaagc-gtgcctttgttcactggtacgtgggtgag 1337
                           ||||||||||||||||||| ||||||||||||||| ||| ||||   ||
Sbjct: 32578726 -----------gacctgatgtatgccaagcagtgcctttgttcacttgtatgtggacaag 32578774

                                                                            
Query: 1338     ggcatggaggaaggagagttttctgaggcccgtgaggacatggctgcccttgagaaggat 1397
                ||||   |||||||||||||||||||||| |||||||||   |||||||||| |||  ||
Sbjct: 32578775 ggcacaaaggaaggagagttttctgaggctcgtgaggaccctgctgcccttgggaa-aat 32578833

                                             
Query: 1398     tacgaggaggttggtgtggattctgttga 1426
                || ||| ||||||  ||||| ||||||||
Sbjct: 32578834 tatgagtaggttgaggtggaatctgttga 32578862


>Sscrofa_Chr15 
||          Length = 157681621

 Score =  769 bits (388), Expect = 0.0
 Identities = 793/928 (85%)
 Strand = Plus / Minus

                                                                             
Query: 481       ctgaccagtgcacaggtcttcagggcttcttggttttccacagctttggcgggggaacgg 540
                 |||| ||||||||||| |||||||||||| |||| |||||||||||||| || || || |
Sbjct: 134326171 ctgatcagtgcacaggacttcagggcttcctggtgttccacagctttggaggcggcaccg 134326112

                                                                             
Query: 541       gttctgggttcacctccctgctgatggaacgtctctctgtcgattatggcaagaagtcca 600
                 | ||||| |||||||| || ||||||||  | |||||||| || || |||||||| ||||
Sbjct: 134326111 gctctggcttcacctcgctcctgatggagaggctctctgttgactacggcaagaaatcca 134326052

                                                                             
Query: 601       agctggagttctccatttacccagccccccaggtttccacagctgtagttgagccctaca 660
                 |||| ||||||||||| ||||| ||||| ||||| |||||||| || || ||||||||||
Sbjct: 134326051 agctcgagttctccatctaccccgccccgcaggtgtccacagccgtggtcgagccctaca 134325992

                                                                             
Query: 661       actccatcctcaccacccacaccaccctggagcactctgattgtgccttcatggtagaca 720
                 |||||||||| |||||||||||||||||||||||||| || |||||||||||||| ||||
Sbjct: 134325991 actccatcctgaccacccacaccaccctggagcactcagactgtgccttcatggtggaca 134325932

                                                                             
Query: 721       atgaggccatctatgacatctgtcgtagaaacctcgatattgaacgcccaacctacacta 780
                 | || ||||| || |||||||| ||  | ||||| || || || || || |||||||| |
Sbjct: 134325931 acgaagccatttacgacatctgccgccgcaacctggacatcgagcgtcccacctacacca 134325872

                                                                             
Query: 781       acctgaataggttgataggtcagattgtgtcctccatcactgcttccctgaggtttgatg 840
                 |||| ||  |  | ||  | || || || ||||||||||| || |||||| | ||||| |
Sbjct: 134325871 acctcaaccgcctcatcagccaaatcgtctcctccatcacagcgtccctgcgctttgacg 134325812

                                                                             
Query: 841       gggccctgaatgttgatctgacagaattccagaccaacctggtgccctatccccgcatcc 900
                 ||||||| || || || ||||| || ||||||||||||||||||||||| || |||||||
Sbjct: 134325811 gggccctcaacgtggacctgacggagttccagaccaacctggtgccctaccctcgcatcc 134325752

                                                                             
Query: 901       atttccctctggccacatatgcccctgtcatctctgctgagaaagcctaccatgaacagc 960
                 | ||||| |||||||| ||||| || ||||||||||| ||||| |||||||| || ||||
Sbjct: 134325751 acttcccgctggccacctatgcaccagtcatctctgcagagaaggcctaccacgagcagc 134325692

                                                                             
Query: 961       tttctgtagcagagatcaccaatgcttgctttgagccagccaaccagatggtgaaatgtg 1020
                 | || || |||||||||||||| || ||||| ||||| ||||||||||||||||| ||||
Sbjct: 134325691 tgtcggtggcagagatcaccaacgcctgcttcgagcctgccaaccagatggtgaagtgtg 134325632

                                                                             
Query: 1021      accctcgccatggtaaatacatggcctgctgcctgttgtaccgtggtgacgtggttccca 1080
                 | || || ||||| || |||||||||||||||||| ||||||| || |||||||| ||||
Sbjct: 134325631 atccccgtcatggcaagtacatggcctgctgcctgctgtaccgaggagacgtggtgccca 134325572

                                                                             
Query: 1081      aagacgtcaatgccgccatcgccaccatcaagaccaagcgtaccatccagtttgtggact 1140
                 | || |||||||||||||||||  |||||||||||||||| |  ||||||||||||||||
Sbjct: 134325571 aggatgtcaatgccgccatcgctgccatcaagaccaagcgcagtatccagtttgtggact 134325512

                                                                             
Query: 1141      ggtgccccactggcttcaaggttggcattaattaccagccccccactgtggtccccggtg 1200
                 |||||||||| |||||||||||||| || || |||||||||||||| || || ||||| |
Sbjct: 134325511 ggtgccccacgggcttcaaggttggtatcaactaccagccccccaccgtagtgcccgggg 134325452

                                                                             
Query: 1201      gagacctggccaaagtacagcgggcagtgtgcatgctgagcaacaccacagccatcgctg 1260
                 | ||||||||||| || ||||| || |||||||||||||||||||| || |||||||| |
Sbjct: 134325451 gtgacctggccaaggtgcagcgtgccgtgtgcatgctgagcaacacgaccgccatcgccg 134325392

                                                                             
Query: 1261      aggcctgggctcgcctggaccacaagtttgacctgatgtatgccaagcgtgcctttgttc 1320
                 |||||||||| ||||| ||||||||||| |||||||||||||||||| | || ||||| |
Sbjct: 134325391 aggcctgggcccgcctagaccacaagttcgacctgatgtatgccaagagggcgtttgtgc 134325332

                                                                             
Query: 1321      actggtacgtgggtgagggcatggaggaaggagagttttctgaggcccgtgaggacatgg 1380
                 ||||||||||||| |||||||||||||| || ||||| ||||||||||| ||||| ||||
Sbjct: 134325331 actggtacgtgggcgagggcatggaggagggcgagttctctgaggcccgggaggatatgg 134325272

                                             
Query: 1381      ctgcccttgagaaggattacgaggaggt 1408
                 ||||||| ||||||||||| ||||||||
Sbjct: 134325271 ctgccctggagaaggattatgaggaggt 134325244



 Score =  765 bits (386), Expect = 0.0
 Identities = 794/930 (85%)
 Strand = Plus / Plus

                                                                             
Query: 479       ggctgaccagtgcacaggtcttcagggcttcttggttttccacagctttggcgggggaac 538
                 |||||||||||||||||| || || || ||| |  | |||||||||||||| || || ||
Sbjct: 134346378 ggctgaccagtgcacaggactccaaggattcctcatcttccacagctttggaggcggcac 134346437

                                                                             
Query: 539       gggttctgggttcacctccctgctgatggaacgtctctctgtcgattatggcaagaagtc 598
                  || ||||| |||||||| || |||||||| || |||||||| || || |||||||| ||
Sbjct: 134346438 cggctctggcttcacctcgctcctgatggagcggctctctgttgactacggcaagaaatc 134346497

                                                                             
Query: 599       caagctggagttctccatttacccagccccccaggtttccacagctgtagttgagcccta 658
                 |||||| ||||||||||| ||||| ||||| ||||| |||||||| || || ||||||||
Sbjct: 134346498 caagctcgagttctccatctaccctgccccgcaggtgtccacagccgtggtcgagcccta 134346557

                                                                             
Query: 659       caactccatcctcaccacccacaccaccctggagcactctgattgtgccttcatggtaga 718
                 |||||||||||| |||||||||||||||||||||||||| || |||||||||||||| ||
Sbjct: 134346558 caactccatcctgaccacccacaccaccctggagcactcagactgtgccttcatggtgga 134346617

                                                                             
Query: 719       caatgaggccatctatgacatctgtcgtagaaacctcgatattgaacgcccaacctacac 778
                 ||| || |||||||| |||||||| ||  | ||||| || || || || || ||||||||
Sbjct: 134346618 caacgaagccatctacgacatctgccgccgcaacctggacatcgagcgtcccacctacac 134346677

                                                                             
Query: 779       taacctgaataggttgataggtcagattgtgtcctccatcactgcttccctgaggtttga 838
                  ||||| ||  |  | || || || || || ||||||||||| || |||||| | |||||
Sbjct: 134346678 caacctcaaccgcctcatcggccaaatcgtctcctccatcacagcgtccctgcgctttga 134346737

                                                                             
Query: 839       tggggccctgaatgttgatctgacagaattccagaccaacctggtgccctatccccgcat 898
                 ||||||||| || || || ||||| || ||||||||||||||||||||||| || |||||
Sbjct: 134346738 tggggccctcaacgtggacctgacggagttccagaccaacctggtgccctaccctcgcat 134346797

                                                                             
Query: 899       ccatttccctctggccacatatgcccctgtcatctctgctgagaaagcctaccatgaaca 958
                 ||| ||||| |||||||| ||||| || ||||||||||| ||||| |||||||| || ||
Sbjct: 134346798 ccacttccccctggccacctatgcaccagtcatctctgcagagaaggcctaccacgagca 134346857

                                                                             
Query: 959       gctttctgtagcagagatcaccaatgcttgctttgagccagccaaccagatggtgaaatg 1018
                 ||| || || |||||||||||||| || ||||| ||||| ||||||||||||||||| ||
Sbjct: 134346858 gctgtcggtggcagagatcaccaacgcctgcttcgagcctgccaaccagatggtgaagtg 134346917

                                                                             
Query: 1019      tgaccctcgccatggtaaatacatggcctgctgcctgttgtaccgtggtgacgtggttcc 1078
                 ||| || || ||||| || |||||||||||||||||| ||||||| || |||||||| ||
Sbjct: 134346918 tgatccccgtcatggcaagtacatggcctgctgcctgctgtaccgaggagacgtggtgcc 134346977

                                                                             
Query: 1079      caaagacgtcaatgccgccatcgccaccatcaagaccaagcgtaccatccagtttgtgga 1138
                 ||| || |||||||||||||||||  |||||||||||||||| |  ||||||||||||||
Sbjct: 134346978 caaggatgtcaatgccgccatcgctgccatcaagaccaagcgcagtatccagtttgtgga 134347037

                                                                             
Query: 1139      ctggtgccccactggcttcaaggttggcattaattaccagccccccactgtggtccccgg 1198
                 |||||||||||| |||||||||||||| || || |||||||||||||| || || ||| |
Sbjct: 134347038 ctggtgccccacgggcttcaaggttggtatcaactaccagccccccaccgtagtgcccag 134347097

                                                                             
Query: 1199      tggagacctggccaaagtacagcgggcagtgtgcatgctgagcaacaccacagccatcgc 1258
                  || ||||||||||| || ||||| || |||||||||||||||||||| || ||||||||
Sbjct: 134347098 gggtgacctggccaaggtgcagcgtgccgtgtgcatgctgagcaacacgaccgccatcgc 134347157

                                                                             
Query: 1259      tgaggcctgggctcgcctggaccacaagtttgacctgatgtatgccaagcgtgcctttgt 1318
                  ||||||||||| ||||| ||||||||||| |||||||||||||||||| | || |||||
Sbjct: 134347158 cgaggcctgggcccgcctagaccacaagttcgacctgatgtatgccaagagggcgtttgt 134347217

                                                                             
Query: 1319      tcactggtacgtgggtgagggcatggaggaaggagagttttctgaggcccgtgaggacat 1378
                  |||||||||||||| |||||||||||||| || ||||| ||||||||||| ||||| ||
Sbjct: 134347218 gcactggtacgtgggcgagggcatggaggagggcgagttctctgaggcccgggaggatat 134347277

                                               
Query: 1379      ggctgcccttgagaaggattacgaggaggt 1408
                 ||||||||| ||||||||||| ||||||||
Sbjct: 134347278 ggctgccctggagaaggattatgaggaggt 134347307



 Score =  208 bits (105), Expect = 7e-51
 Identities = 177/201 (88%)
 Strand = Plus / Minus

                                                                             
Query: 107       gcgtgagtgcatctccatccacgttggccaagctggtgtccagatcggcaatgcctgctg 166
                 |||||| ||||||||  |||| ||||| || || ||||||||||| ||||||||||||||
Sbjct: 134327107 gcgtgaatgcatctcagtccatgttgggcaggcaggtgtccagatgggcaatgcctgctg 134327048

                                                                             
Query: 167       ggagctctactgcctggaacacggcatccagcccgatggccagatgccgagtgacaagac 226
                 |||||||||||| |||||||| || |||||||| ||||| |||||||| |||||||||||
Sbjct: 134327047 ggagctctactgtctggaacatgggatccagccggatgggcagatgcccagtgacaagac 134326988

                                                                             
Query: 227       cattgggggaggagatgactccttcaacaccttcttcagtgagacaggcgctggcaagca 286
                 |||||| |||||||| |||||||||| |||||||||| |||| || || ||||| |||||
Sbjct: 134326987 cattggtggaggagacgactccttcaccaccttcttctgtgaaactggtgctggaaagca 134326928

                                      
Query: 287       tgtgcccagggcagtgtttgt 307
                 ||||||| ||||||| |||||
Sbjct: 134326927 tgtgccccgggcagtttttgt 134326907



 Score =  184 bits (93), Expect = 1e-43
 Identities = 174/201 (86%)
 Strand = Plus / Plus

                                                                             
Query: 107       gcgtgagtgcatctccatccacgttggccaagctggtgtccagatcggcaatgcctgctg 166
                 |||||||||||||||  ||||||| ||||| || ||||| ||||| ||||||||||||||
Sbjct: 134344993 gcgtgagtgcatctcagtccacgtgggccaggccggtgtgcagattggcaatgcctgctg 134345052

                                                                             
Query: 167       ggagctctactgcctggaacacggcatccagcccgatggccagatgccgagtgacaagac 226
                 ||||||||||||| ||||||| || |||||||| ||||| |||||||| || ||||||||
Sbjct: 134345053 ggagctctactgcttggaacatgggatccagccagatgggcagatgcccagcgacaagac 134345112

                                                                             
Query: 227       cattgggggaggagatgactccttcaacaccttcttcagtgagacaggcgctggcaagca 286
                 ||| || ||||| || ||||||||||| || ||||| || || || ||||| || |||||
Sbjct: 134345113 catcggaggaggggacgactccttcaatacgttctttagcgaaactggcgccggaaagca 134345172

                                      
Query: 287       tgtgcccagggcagtgtttgt 307
                 ||||||| |||||||||||||
Sbjct: 134345173 tgtgccccgggcagtgtttgt 134345193



 Score =  172 bits (87), Expect = 4e-40
 Identities = 135/151 (89%)
 Strand = Plus / Plus

                                                                             
Query: 330       gatgaagttcgcactggcacctaccgccagctcttccaccctgagcagctcatcacaggc 389
                 ||||| ||||| || ||||| ||||||||||||||||| || |||||||||||||| || 
Sbjct: 134345531 gatgaggttcggacgggcacgtaccgccagctcttccatccggagcagctcatcactggg 134345590

                                                                             
Query: 390       aaggaagatgctgccaataactatgcccgaggtcactacaccattggcaaggagatcatt 449
                 ||||||||||| |||||||||||||||||||| |||||||||||||| |||||| |||||
Sbjct: 134345591 aaggaagatgcggccaataactatgcccgaggccactacaccattggaaaggagctcatt 134345650

                                                
Query: 450       gacctcgtcttggaccgaattcggaaactgg 480
                 ||||| ||  |||||||||||||||| ||||
Sbjct: 134345651 gacctggtgctggaccgaattcggaagctgg 134345681



 Score =  125 bits (63), Expect = 8e-26
 Identities = 111/126 (88%), Gaps = 2/126 (1%)
 Strand = Plus / Minus

                                                                            
Query: 1309     gtgcctttgttcactggtacgtgggtgagggcatggaggaaggagagttttctgaggccc 1368
                |||| |||||||||||| || ||| |||| |||||||||||  ||||||||||||| |||
Sbjct: 64385992 gtgcttttgttcactggcacatggctgagagcatggaggaa--agagttttctgagcccc 64385935

                                                                            
Query: 1369     gtgaggacatggctgcccttgagaaggattacgaggaggttggtgtggattctgttgaaa 1428
                 ||| |||||| ||||||||||||||||||| || ||| ||||| |||||||||||||||
Sbjct: 64385934 atgaagacatgactgcccttgagaaggattatgaagagattggtatggattctgttgaaa 64385875

                      
Query: 1429     gagagg 1434
                ||||||
Sbjct: 64385874 gagagg 64385869



 Score =  125 bits (63), Expect = 8e-26
 Identities = 111/126 (88%), Gaps = 2/126 (1%)
 Strand = Plus / Plus

                                                                            
Query: 1309     gtgcctttgttcactggtacgtgggtgagggcatggaggaaggagagttttctgaggccc 1368
                |||| |||||||||||| || ||| |||| |||||||||||  ||||||||||||| |||
Sbjct: 64513538 gtgcttttgttcactggcacatggctgagagcatggaggaa--agagttttctgagcccc 64513595

                                                                            
Query: 1369     gtgaggacatggctgcccttgagaaggattacgaggaggttggtgtggattctgttgaaa 1428
                 ||| |||||| ||||||||||||||||||| || ||| ||||| |||||||||||||||
Sbjct: 64513596 atgaagacatgactgcccttgagaaggattatgaagagattggtatggattctgttgaaa 64513655

                      
Query: 1429     gagagg 1434
                ||||||
Sbjct: 64513656 gagagg 64513661



 Score =  107 bits (54), Expect = 2e-20
 Identities = 96/110 (87%)
 Strand = Plus / Minus

                                                                             
Query: 344       tggcacctaccgccagctcttccaccctgagcagctcatcacaggcaaggaagatgctgc 403
                 |||| ||||||| |||||||||||||| |||||||||||||| || || || ||||| ||
Sbjct: 134326557 tggcccctaccggcagctcttccacccagagcagctcatcactgggaaagaggatgcggc 134326498

                                                                   
Query: 404       caataactatgcccgaggtcactacaccattggcaaggagatcattgacc 453
                  || ||||||||||| |||||||||||||| |||||||| || |||||||
Sbjct: 134326497 taacaactatgcccgtggtcactacaccatcggcaaggaaattattgacc 134326448


>Sscrofa_Chr14 
||          Length = 153851969

 Score =  515 bits (260), Expect = e-143
 Identities = 575/680 (84%)
 Strand = Plus / Minus

                                                                            
Query: 483      gaccagtgcacaggtcttcagggcttcttggttttccacagctttggcgggggaacgggt 542
                |||| |||||| || || ||||||||| |  | |||||||||||||| || || || || 
Sbjct: 54046279 gacctgtgcacggggctgcagggcttcctcatcttccacagctttgggggcggcaccggc 54046220

                                                                            
Query: 543      tctgggttcacctccctgctgatggaacgtctctctgtcgattatggcaagaagtccaag 602
                || || ||| | || ||||| ||||| || ||||| || || || |||||||||||||||
Sbjct: 54046219 tcgggcttcgcatctctgctcatggagcggctctcggtggactacggcaagaagtccaag 54046160

                                                                            
Query: 603      ctggagttctccatttacccagccccccaggtttccacagctgtagttgagccctacaac 662
                ||||||||| |||||||||| ||||||||||| ||||| || || || ||||||||||||
Sbjct: 54046159 ctggagttcgccatttacccggccccccaggtctccacggccgtggtggagccctacaac 54046100

                                                                            
Query: 663      tccatcctcaccacccacaccaccctggagcactctgattgtgccttcatggtagacaat 722
                |||||||| ||||| ||||| |||||||||||||| || || ||||||||||| ||||| 
Sbjct: 54046099 tccatcctgaccacgcacacgaccctggagcactcggactgcgccttcatggtggacaac 54046040

                                                                            
Query: 723      gaggccatctatgacatctgtcgtagaaacctcgatattgaacgcccaacctacactaac 782
                ||||||||||| |||||||||||  | ||||| || || || || || |||||||| |||
Sbjct: 54046039 gaggccatctacgacatctgtcggcgcaacctggacatcgagcggcccacctacaccaac 54045980

                                                                            
Query: 783      ctgaataggttgataggtcagattgtgtcctccatcactgcttccctgaggtttgatggg 842
                || ||| |  |||| || ||||| |||||||||||||| || |||||| | || || |||
Sbjct: 54045979 ctcaatcgtctgatcgggcagatcgtgtcctccatcacagcctccctgcgcttcgacggg 54045920

                                                                            
Query: 843      gccctgaatgttgatctgacagaattccagaccaacctggtgccctatccccgcatccat 902
                ||||| || || || ||||| || ||||||||||||||||| ||||| ||||||||||| 
Sbjct: 54045919 gccctcaacgtggacctgacggagttccagaccaacctggtcccctacccccgcatccac 54045860

                                                                            
Query: 903      ttccctctggccacatatgcccctgtcatctctgctgagaaagcctaccatgaacagctt 962
                ||||| |||||||| || ||||| |||||||| || ||||| |||||||| || ||||| 
Sbjct: 54045859 ttccccctggccacctacgccccggtcatctcggccgagaaggcctaccacgagcagctg 54045800

                                                                            
Query: 963      tctgtagcagagatcaccaatgcttgctttgagccagccaaccagatggtgaaatgtgac 1022
                ||||| || ||||||||||| || ||||| ||||| |||||||||||||| || ||||||
Sbjct: 54045799 tctgtggccgagatcaccaacgcctgcttcgagccggccaaccagatggtcaagtgtgac 54045740

                                                                            
Query: 1023     cctcgccatggtaaatacatggcctgctgcctgttgtaccgtggtgacgtggttcccaaa 1082
                |||||||| || || ||||||||||||||| || ||||| | || |||||||| ||||||
Sbjct: 54045739 cctcgccacggcaagtacatggcctgctgcatgctgtacaggggagacgtggtccccaaa 54045680

                                                                            
Query: 1083     gacgtcaatgccgccatcgccaccatcaagaccaagcgtaccatccagtttgtggactgg 1142
                |||||||| || |||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 54045679 gacgtcaacgcggccatcgccaccatcaagaccaagcgcaccatccagtttgtggactgg 54045620

                                    
Query: 1143     tgccccactggcttcaaggt 1162
                ||||| ||||| ||||||||
Sbjct: 54045619 tgcccgactgggttcaaggt 54045600



 Score =  515 bits (260), Expect = e-143
 Identities = 575/680 (84%)
 Strand = Plus / Plus

                                                                            
Query: 483      gaccagtgcacaggtcttcagggcttcttggttttccacagctttggcgggggaacgggt 542
                |||| |||||| || || ||||||||| |  | |||||||||||||| || || || || 
Sbjct: 54217763 gacctgtgcacggggctgcagggcttcctcatcttccacagctttgggggcggcaccggc 54217822

                                                                            
Query: 543      tctgggttcacctccctgctgatggaacgtctctctgtcgattatggcaagaagtccaag 602
                || || ||| | || ||||| ||||| || ||||| || || || |||||||||||||||
Sbjct: 54217823 tcgggcttcgcatctctgctcatggagcggctctcggtggactacggcaagaagtccaag 54217882

                                                                            
Query: 603      ctggagttctccatttacccagccccccaggtttccacagctgtagttgagccctacaac 662
                ||||||||| |||||||||| ||||||||||| ||||| || || || ||||||||||||
Sbjct: 54217883 ctggagttcgccatttacccggccccccaggtctccacggccgtggtggagccctacaac 54217942

                                                                            
Query: 663      tccatcctcaccacccacaccaccctggagcactctgattgtgccttcatggtagacaat 722
                |||||||| ||||| ||||| |||||||||||||| || || ||||||||||| ||||| 
Sbjct: 54217943 tccatcctgaccacgcacacgaccctggagcactcggactgcgccttcatggtggacaac 54218002

                                                                            
Query: 723      gaggccatctatgacatctgtcgtagaaacctcgatattgaacgcccaacctacactaac 782
                ||||||||||| |||||||||||  | ||||| || || || || || |||||||| |||
Sbjct: 54218003 gaggccatctacgacatctgtcggcgcaacctggacatcgagcggcccacctacaccaac 54218062

                                                                            
Query: 783      ctgaataggttgataggtcagattgtgtcctccatcactgcttccctgaggtttgatggg 842
                || ||| |  |||| || ||||| |||||||||||||| || |||||| | || || |||
Sbjct: 54218063 ctcaatcgtctgatcgggcagatcgtgtcctccatcacagcctccctgcgcttcgacggg 54218122

                                                                            
Query: 843      gccctgaatgttgatctgacagaattccagaccaacctggtgccctatccccgcatccat 902
                ||||| || || || ||||| || ||||||||||||||||| ||||| ||||||||||| 
Sbjct: 54218123 gccctcaacgtggacctgacggagttccagaccaacctggtcccctacccccgcatccac 54218182

                                                                            
Query: 903      ttccctctggccacatatgcccctgtcatctctgctgagaaagcctaccatgaacagctt 962
                ||||| |||||||| || ||||| |||||||| || ||||| |||||||| || ||||| 
Sbjct: 54218183 ttccccctggccacctacgccccggtcatctcggccgagaaggcctaccacgagcagctg 54218242

                                                                            
Query: 963      tctgtagcagagatcaccaatgcttgctttgagccagccaaccagatggtgaaatgtgac 1022
                ||||| || ||||||||||| || ||||| ||||| |||||||||||||| || ||||||
Sbjct: 54218243 tctgtggccgagatcaccaacgcctgcttcgagccggccaaccagatggtcaagtgtgac 54218302

                                                                            
Query: 1023     cctcgccatggtaaatacatggcctgctgcctgttgtaccgtggtgacgtggttcccaaa 1082
                |||||||| || || ||||||||||||||| || ||||| | || |||||||| ||||||
Sbjct: 54218303 cctcgccacggcaagtacatggcctgctgcatgctgtacaggggagacgtggtccccaaa 54218362

                                                                            
Query: 1083     gacgtcaatgccgccatcgccaccatcaagaccaagcgtaccatccagtttgtggactgg 1142
                |||||||| || |||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 54218363 gacgtcaacgcggccatcgccaccatcaagaccaagcgcaccatccagtttgtggactgg 54218422

                                    
Query: 1143     tgccccactggcttcaaggt 1162
                ||||| ||||| ||||||||
Sbjct: 54218423 tgcccgactgggttcaaggt 54218442



 Score =  260 bits (131), Expect = 2e-66
 Identities = 227/259 (87%)
 Strand = Plus / Minus

                                                                            
Query: 1159     aggttggcattaattaccagccccccactgtggtccccggtggagacctggccaaagtac 1218
                |||| ||||| || |||||||||||||| |||||||| || |||||||||||||| || |
Sbjct: 54043229 aggtgggcatcaactaccagccccccacggtggtcccagggggagacctggccaaggtgc 54043170

                                                                            
Query: 1219     agcgggcagtgtgcatgctgagcaacaccacagccatcgctgaggcctgggctcgcctgg 1278
                ||||||| ||||||||||||||||||||||| |||||||| ||||||||||| |||||||
Sbjct: 54043169 agcgggccgtgtgcatgctgagcaacaccacggccatcgccgaggcctgggcccgcctgg 54043110

                                                                            
Query: 1279     accacaagtttgacctgatgtatgccaagcgtgcctttgttcactggtacgtgggtgagg 1338
                |||||||||| ||||| ||||| |||||||||||||| || |||||||||||||| || |
Sbjct: 54043109 accacaagttcgacctcatgtacgccaagcgtgccttcgtgcactggtacgtgggggaag 54043050

                                                                            
Query: 1339     gcatggaggaaggagagttttctgaggcccgtgaggacatggctgcccttgagaaggatt 1398
                |||||||||| || ||||| || |||||||| |||||| |||| || || ||||| ||||
Sbjct: 54043049 gcatggaggagggcgagttctcggaggcccgggaggacctggcggctctggagaaagatt 54042990

                                   
Query: 1399     acgaggaggttggtgtgga 1417
                |||| ||||| || |||||
Sbjct: 54042989 acgaagaggtgggcgtgga 54042971



 Score =  252 bits (127), Expect = 5e-64
 Identities = 226/259 (87%)
 Strand = Plus / Plus

                                                                            
Query: 1159     aggttggcattaattaccagccccccactgtggtccccggtggagacctggccaaagtac 1218
                |||| ||||| || |||||||||||||| |||||||| || |||||||||||||| || |
Sbjct: 54220385 aggtaggcatcaactaccagccccccacggtggtcccagggggagacctggccaaggtgc 54220444

                                                                            
Query: 1219     agcgggcagtgtgcatgctgagcaacaccacagccatcgctgaggcctgggctcgcctgg 1278
                ||||||| ||||||||||||||||||||||| |||||||| ||||||||||| |||||||
Sbjct: 54220445 agcgggccgtgtgcatgctgagcaacaccacggccatcgccgaggcctgggcccgcctgg 54220504

                                                                            
Query: 1279     accacaagtttgacctgatgtatgccaagcgtgcctttgttcactggtacgtgggtgagg 1338
                |||||||||| ||||| |||||||||||||||||||| || |||||||||||||| || |
Sbjct: 54220505 accacaagttcgacctcatgtatgccaagcgtgccttcgtgcactggtacgtgggggaag 54220564

                                                                            
Query: 1339     gcatggaggaaggagagttttctgaggcccgtgaggacatggctgcccttgagaaggatt 1398
                ||||||| || || ||||| || |||||| | |||||| |||| || || ||||| ||||
Sbjct: 54220565 gcatggaagagggcgagttctcggaggccagggaggacctggcggctctggagaaagatt 54220624

                                   
Query: 1399     acgaggaggttggtgtgga 1417
                |||| ||||| || |||||
Sbjct: 54220625 acgaagaggtgggcgtgga 54220643



 Score =  182 bits (92), Expect = 4e-43
 Identities = 182/212 (85%)
 Strand = Plus / Minus

                                                                            
Query: 111      gagtgcatctccatccacgttggccaagctggtgtccagatcggcaatgcctgctgggag 170
                ||||||||||| |||||||| || || || || || ||||||||||||||||||||||||
Sbjct: 54047701 gagtgcatctctatccacgtggggcaggcaggggttcagatcggcaatgcctgctgggag 54047642

                                                                            
Query: 171      ctctactgcctggaacacggcatccagcccgatggccagatgccgagtgacaagaccatt 230
                || |||||||| ||||| || || ||||||||||| |||||||| |||||||| ||||| 
Sbjct: 54047641 ctgtactgccttgaacatggaattcagcccgatggtcagatgcccagtgacaaaaccatc 54047582

                                                                            
Query: 231      gggggaggagatgactccttcaacaccttcttcagtgagacaggcgctggcaagcatgtg 290
                || || || || ||||| |||||||| |||||||||||||| || || |||||||| |||
Sbjct: 54047581 ggcggtggggacgactcgttcaacacgttcttcagtgagactggggccggcaagcacgtg 54047522

                                                
Query: 291      cccagggcagtgtttgtagacctggaacccac 322
                ||||| || |||||||| |||||||| |||||
Sbjct: 54047521 cccagagccgtgtttgtggacctggagcccac 54047490



 Score =  182 bits (92), Expect = 4e-43
 Identities = 182/212 (85%)
 Strand = Plus / Plus

                                                                            
Query: 111      gagtgcatctccatccacgttggccaagctggtgtccagatcggcaatgcctgctgggag 170
                ||||||||||| |||||||| || || || || || ||||||||||||||||||||||||
Sbjct: 54216341 gagtgcatctctatccacgtggggcaggcaggggttcagatcggcaatgcctgctgggag 54216400

                                                                            
Query: 171      ctctactgcctggaacacggcatccagcccgatggccagatgccgagtgacaagaccatt 230
                || |||||||| ||||| || || ||||||||||| |||||||| |||||||| ||||| 
Sbjct: 54216401 ctgtactgccttgaacatggaattcagcccgatggtcagatgcccagtgacaaaaccatc 54216460

                                                                            
Query: 231      gggggaggagatgactccttcaacaccttcttcagtgagacaggcgctggcaagcatgtg 290
                || || || || ||||| |||||||| |||||||||||||| || || |||||||| |||
Sbjct: 54216461 ggcggtggggacgactcgttcaacacgttcttcagtgagactggggccggcaagcacgtg 54216520

                                                
Query: 291      cccagggcagtgtttgtagacctggaacccac 322
                ||||| || |||||||| |||||||| |||||
Sbjct: 54216521 cccagagctgtgtttgtggacctggagcccac 54216552



 Score = 95.6 bits (48), Expect = 7e-17
 Identities = 99/116 (85%)
 Strand = Plus / Minus

                                                                            
Query: 330      gatgaagttcgcactggcacctaccgccagctcttccaccctgagcagctcatcacaggc 389
                |||||||| ||||| || |||||| | |||||||||||||| |||||||| ||||| || 
Sbjct: 54046693 gatgaagtgcgcacggggacctacaggcagctcttccacccggagcagctgatcaccggg 54046634

                                                                        
Query: 390      aaggaagatgctgccaataactatgcccgaggtcactacaccattggcaaggagat 445
                |||||||| || ||||| || || ||| |||| ||||||||||| |||||||||||
Sbjct: 54046633 aaggaagacgcagccaacaattacgccagaggccactacaccatcggcaaggagat 54046578



 Score = 95.6 bits (48), Expect = 7e-17
 Identities = 99/116 (85%)
 Strand = Plus / Plus

                                                                            
Query: 330      gatgaagttcgcactggcacctaccgccagctcttccaccctgagcagctcatcacaggc 389
                |||||||| ||||| || |||||| | |||||||||||||| |||||||| ||||| || 
Sbjct: 54217349 gatgaagtgcgcacggggacctacaggcagctcttccacccggagcagctgatcaccggg 54217408

                                                                        
Query: 390      aaggaagatgctgccaataactatgcccgaggtcactacaccattggcaaggagat 445
                |||||||| || ||||| || || ||| |||| ||||||||||| |||||||||||
Sbjct: 54217409 aaggaagacgcagccaacaattacgccagaggccactacaccatcggcaaggagat 54217464



 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 54/59 (91%)
 Strand = Plus / Plus

                                                                           
Query: 1331     gggtgagggcatggaggaaggagagttttctgaggcccgtgaggacatggctgcccttg 1389
                |||||||||||||| ||||||||||||   ||||||| |||||||||||||||||||||
Sbjct: 25285605 gggtgagggcatggtggaaggagagttccttgaggcctgtgaggacatggctgcccttg 25285663


>gb|GL895007.2| Sus scrofa unplaced genomic scaffold ChrUScaf2891
          Length = 58772

 Score =  424 bits (214), Expect = e-116
 Identities = 550/662 (83%)
 Strand = Plus / Minus

                                                                         
Query: 501   cagggcttcttggttttccacagctttggcgggggaacgggttctgggttcacctccctg 560
             ||||||||| || | |||||||| ||||| ||||| || || ||||| ||||| || |||
Sbjct: 17341 cagggcttcctgatcttccacagttttggggggggcaccggctctggcttcacttctctg 17282

                                                                         
Query: 561   ctgatggaacgtctctctgtcgattatggcaagaagtccaagctggagttctccatttac 620
             ||||||||||| |||||  | ||||| ||||||||||||||||| |||||  |||| |||
Sbjct: 17281 ctgatggaacgcctctccctggattacggcaagaagtccaagctagagtttgccatctac 17222

                                                                         
Query: 621   ccagccccccaggtttccacagctgtagttgagccctacaactccatcctcaccacccac 680
             || || |||||||| ||||| || || || || ||||||||||||||||| |||||||||
Sbjct: 17221 ccggcaccccaggtctccacggccgtggtggaaccctacaactccatcctgaccacccac 17162

                                                                         
Query: 681   accaccctggagcactctgattgtgccttcatggtagacaatgaggccatctatgacatc 740
             ||||||||||| || || ||  ||||||||||||| ||||| ||||||||||| ||||||
Sbjct: 17161 accaccctggaacattcagaaagtgccttcatggtggacaacgaggccatctacgacatc 17102

                                                                         
Query: 741   tgtcgtagaaacctcgatattgaacgcccaacctacactaacctgaataggttgataggt 800
             || || || ||||| || || || ||||| |||||||| ||||| ||  |  | ||  | 
Sbjct: 17101 tgccgcaggaacctggacatcgagcgccccacctacaccaacctcaaccgcctcatcagc 17042

                                                                         
Query: 801   cagattgtgtcctccatcactgcttccctgaggtttgatggggccctgaatgttgatctg 860
             ||||| |||||||||||||| || |||||| | |||||||||||||| || || || |||
Sbjct: 17041 cagatcgtgtcctccatcaccgcctccctgcgctttgatggggccctcaacgtggacctg 16982

                                                                         
Query: 861   acagaattccagaccaacctggtgccctatccccgcatccatttccctctggccacatat 920
             || || ||||||||||||||||||||||| ||||||||||| ||||| |||| ||| || 
Sbjct: 16981 accgagttccagaccaacctggtgccctacccccgcatccacttccccctggtcacctac 16922

                                                                         
Query: 921   gcccctgtcatctctgctgagaaagcctaccatgaacagctttctgtagcagagatcacc 980
             || ||  |||||||||||||||| |||||||| || ||||| ||||| || |||||||||
Sbjct: 16921 gcacccatcatctctgctgagaaggcctaccacgagcagctctctgtggctgagatcacc 16862

                                                                         
Query: 981   aatgcttgctttgagccagccaaccagatggtgaaatgtgaccctcgccatggtaaatac 1040
             |   | |||||||||||   || |||||||||||| ||||| || || ||||| || |||
Sbjct: 16861 agctcctgctttgagcccaacagccagatggtgaagtgtgatccccgtcatggcaagtac 16802

                                                                         
Query: 1041  atggcctgctgcctgttgtaccgtggtgacgtggttcccaaagacgtcaatgccgccatc 1100
             |||||||||||| || | ||||| || |||||||| ||||| |||||||| | |||||| 
Sbjct: 16801 atggcctgctgcatgctctaccggggggacgtggtgcccaaggacgtcaacgtcgccatt 16742

                                                                         
Query: 1101  gccaccatcaagaccaagcgtaccatccagtttgtggactggtgccccactggcttcaag 1160
             ||  |||||||||||||| | |||||||||||||| |||||||| ||||| |||||||||
Sbjct: 16741 gctgccatcaagaccaagaggaccatccagtttgtagactggtgtcccacaggcttcaag 16682

               
Query: 1161  gt 1162
             ||
Sbjct: 16681 gt 16680



 Score =  206 bits (104), Expect = 3e-50
 Identities = 155/172 (90%)
 Strand = Plus / Minus

                                                                         
Query: 1234  tgctgagcaacaccacagccatcgctgaggcctgggctcgcctggaccacaagtttgacc 1293
             |||||||||||||||| |||||||| ||||||||||| ||||||||||||||||| ||||
Sbjct: 13597 tgctgagcaacaccacggccatcgcggaggcctgggcccgcctggaccacaagttcgacc 13538

                                                                         
Query: 1294  tgatgtatgccaagcgtgcctttgttcactggtacgtgggtgagggcatggaggaaggag 1353
             ||||||| |||||||||||||| || |||||||| || || ||||| ||||| |||||||
Sbjct: 13537 tgatgtacgccaagcgtgccttcgtgcactggtatgtcggagaggggatggaagaaggag 13478

                                                                 
Query: 1354  agttttctgaggcccgtgaggacatggctgcccttgagaaggattacgagga 1405
             | |||||||||||||| |||||| |||||||||| ||||||||||| |||||
Sbjct: 13477 aattttctgaggcccgggaggacctggctgccctggagaaggattatgagga 13426



 Score = 89.7 bits (45), Expect = 4e-15
 Identities = 84/97 (86%)
 Strand = Plus / Minus

                                                                         
Query: 348   acctaccgccagctcttccaccctgagcagctcatcacaggcaaggaagatgctgccaat 407
             |||||||||||||||||||| || |||||||| |||||||| || || ||||| ||||| 
Sbjct: 19380 acctaccgccagctcttccatccagagcagctgatcacaggaaaagaggatgcagccaac 19321

                                                  
Query: 408   aactatgcccgaggtcactacaccattggcaaggaga 444
             ||||||||||| || ||||||||  | ||||||||||
Sbjct: 19320 aactatgcccggggccactacacagtgggcaaggaga 19284


>gb|GL895352.1| Sus scrofa unplaced genomic scaffold chrU_scaffold3926
          Length = 32274

 Score =  194 bits (98), Expect = 1e-46
 Identities = 132/142 (92%), Gaps = 1/142 (0%)
 Strand = Plus / Plus

                                                                        
Query: 105  atgcgtgagtgcatctccatccacgttggccaagctggtgtccagatcggcaatgcctgc 164
            |||| |||||||||||||||||||| |||||||||  |||||||| | |||| |||||||
Sbjct: 7333 atgcatgagtgcatctccatccacgctggccaagcctgtgtccaggttggcagtgcctgc 7392

                                                                        
Query: 165  tgggagctctactgcctggaacacggcatccagcccgatggccagatgccgagtgacaag 224
            ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 7393 tgggagctctactgcctggaacacggcatccagcctgatggccagatgcc-agtgacaag 7451

                                  
Query: 225  accattgggggaggagatgact 246
            || |||||||||||||||||||
Sbjct: 7452 actattgggggaggagatgact 7473


>Sscrofa_Chr08 
||          Length = 148491826

 Score =  119 bits (60), Expect = 5e-24
 Identities = 90/100 (90%)
 Strand = Plus / Plus

                                                                            
Query: 1276     tggaccacaagtttgacctgatgtatgccaagcgtgcctttgttcactggtacgtgggtg 1335
                |||||||||| ||||||||||| |||||||||| ||||| |||||||||||| |||||||
Sbjct: 60848335 tggaccacaactttgacctgatatatgccaagcctgcctctgttcactggtatgtgggtg 60848394

                                                        
Query: 1336     agggcatggaggaaggagagttttctgaggcccgtgagga 1375
                ||||| ||||||||||||||  ||||| ||||| ||||||
Sbjct: 60848395 agggcgtggaggaaggagagacttctggggcccatgagga 60848434


>Sscrofa_Chr10 
||          Length = 79102373

 Score =  103 bits (52), Expect = 3e-19
 Identities = 142/172 (82%)
 Strand = Plus / Minus

                                                                            
Query: 1128     cagtttgtggactggtgccccactggcttcaaggttggcattaattaccagccccccact 1187
                |||||||| || ||||| ||||||||||||||||| ||||| |||   || |||||||  
Sbjct: 71596456 cagtttgtagattggtgtcccactggcttcaaggtgggcatcaatggtcatccccccagg 71596397

                                                                            
Query: 1188     gtggtccccggtggagacctggccaaagtacagcgggcagtgtgcatgctgagcaacacc 1247
                | ||| || || || ||||||||| | |  |||||||| || ||||||||||||||||||
Sbjct: 71596396 gcggtgccaggaggggacctggccgaggcccagcgggctgtctgcatgctgagcaacacc 71596337

                                                                    
Query: 1248     acagccatcgctgaggcctgggctcgcctggaccacaagtttgacctgatgt 1299
                || ||  |||| ||||||||||| ||||||| ||||||||| ||||| ||||
Sbjct: 71596336 acggcggtcgcggaggcctgggcccgcctgggccacaagttcgacctcatgt 71596285



 Score =  103 bits (52), Expect = 3e-19
 Identities = 142/172 (82%)
 Strand = Plus / Plus

                                                                            
Query: 1128     cagtttgtggactggtgccccactggcttcaaggttggcattaattaccagccccccact 1187
                |||||||| || ||||| ||||||||||||||||| ||||| |||   || |||||||  
Sbjct: 71672445 cagtttgtagattggtgtcccactggcttcaaggtgggcatcaatggtcatccccccagg 71672504

                                                                            
Query: 1188     gtggtccccggtggagacctggccaaagtacagcgggcagtgtgcatgctgagcaacacc 1247
                | ||| || || || ||||||||| | |  |||||||| || ||||||||||||||||||
Sbjct: 71672505 gcggtgccaggaggggacctggccgaggcccagcgggctgtctgcatgctgagcaacacc 71672564

                                                                    
Query: 1248     acagccatcgctgaggcctgggctcgcctggaccacaagtttgacctgatgt 1299
                || ||  |||| ||||||||||| ||||||| ||||||||| ||||| ||||
Sbjct: 71672565 acggcggtcgcggaggcctgggcccgcctgggccacaagttcgacctcatgt 71672616



 Score = 65.9 bits (33), Expect = 6e-08
 Identities = 111/137 (81%)
 Strand = Plus / Minus

                                                                            
Query: 603      ctggagttctccatttacccagccccccaggtttccacagctgtagttgagccctacaac 662
                |||||||||||| | ||||||||||||  | | ||||| || || || ||||| || |||
Sbjct: 71596981 ctggagttctccgtctacccagcccccaggatctccactgccgtggtggagccttataac 71596922

                                                                            
Query: 663      tccatcctcaccacccacaccaccctggagcactctgattgtgccttcatggtagacaat 722
                ||| |||| ||||| ||| ||||| | |||||||| || ||  ||||| || | ||||||
Sbjct: 71596921 tccgtccttaccacacaccccaccatagagcactcagactgcaccttcctgctggacaat 71596862

                                 
Query: 723      gaggccatctatgacat 739
                |||||| ||||||||||
Sbjct: 71596861 gaggccgtctatgacat 71596845



 Score = 65.9 bits (33), Expect = 6e-08
 Identities = 111/137 (81%)
 Strand = Plus / Plus

                                                                            
Query: 603      ctggagttctccatttacccagccccccaggtttccacagctgtagttgagccctacaac 662
                |||||||||||| | ||||||||||||  | | ||||| || || || ||||| || |||
Sbjct: 71671920 ctggagttctccgtctacccagcccccaggatctccactgccgtggtggagccttataac 71671979

                                                                            
Query: 663      tccatcctcaccacccacaccaccctggagcactctgattgtgccttcatggtagacaat 722
                ||| |||| ||||| ||| ||||| | |||||||| || ||  ||||| || | ||||||
Sbjct: 71671980 tccgtccttaccacacaccccaccatagagcactcagactgcaccttcctgctggacaat 71672039

                                 
Query: 723      gaggccatctatgacat 739
                |||||| ||||||||||
Sbjct: 71672040 gaggccgtctatgacat 71672056



 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 65/76 (85%)
 Strand = Plus / Minus

                                                                            
Query: 124      tccacgttggccaagctggtgtccagatcggcaatgcctgctgggagctctactgcctgg 183
                ||||| ||||||||||||| |||||||| ||  |||| || ||||| ||||| |||||||
Sbjct: 71599685 tccacattggccaagctggcgtccagattggggatgcttgttgggaactctattgcctgg 71599626

                                
Query: 184      aacacggcatccagcc 199
                |||| || ||||||||
Sbjct: 71599625 aacatgggatccagcc 71599610



 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 65/76 (85%)
 Strand = Plus / Plus

                                                                            
Query: 124      tccacgttggccaagctggtgtccagatcggcaatgcctgctgggagctctactgcctgg 183
                ||||| ||||||||||||| |||||||| ||  |||| || ||||| ||||| |||||||
Sbjct: 71669216 tccacattggccaagctggcgtccagattggggatgcttgttgggaactctattgcctgg 71669275

                                
Query: 184      aacacggcatccagcc 199
                |||| || ||||||||
Sbjct: 71669276 aacatgggatccagcc 71669291


  Database: Sscrofa_10.2.fasta
    Posted date:  Nov 16, 2011 10:34 AM
  Number of letters in database: 2,808,509,378
  Number of sequences in database:  4582
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 43,830,697
Number of extensions: 413
Number of successful extensions: 413
Number of sequences better than 1.0e-05: 10
Number of HSP's gapped: 381
Number of HSP's successfully gapped: 73
Length of query: 1593
Length of database: 2,808,509,378
Length adjustment: 22
Effective length of query: 1571
Effective length of database: 2,808,408,574
Effective search space: 4412009869754
Effective search space used: 4412009869754
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)