Animal-Genome cDNA 20110601C-000493


Search to RefSeqBP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-000493
         (2486 letters)

Database: RefSeq49_BP.fasta 
           33,088 sequences; 17,681,374 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_776365.1| interferon-induced GTP-binding protein Mx1 [Bos...   947   0.0  
Alignment   gi|NP_776366.1| interferon-induced GTP-binding protein Mx2 [Bos...   711   0.0  
Alignment   gi|NP_001070288.1| dynamin-1 [Bos taurus].                           235   2e-61
Alignment   gi|NP_001092839.1| dynamin-2 [Bos taurus].                           232   1e-60
Alignment   gi|NP_001230213.1| dynamin 3 [Bos taurus].                           226   1e-58
Alignment   gi|NP_001039959.1| dynamin-1-like protein [Bos taurus].              181   2e-45
Alignment   gi|NP_001179890.1| dynamin-like 120 kDa protein, mitochondrial ...    95   3e-19
Alignment   gi|XP_002684877.1| PREDICTED: optic atrophy 1 homolog [Bos taur...    95   3e-19

>ref|NP_776365.1| interferon-induced GTP-binding protein Mx1 [Bos taurus].
          Length = 648

 Score =  947 bits (2449), Expect = 0.0
 Identities = 495/656 (75%), Positives = 544/656 (82%)
 Frame = +3

Query: 171  MVYSNCESKEPDSVSASNHLLLNGNDELVEKSHKTGPENNLYSQYEEKVRPCIDLIDSLR 350
            MV+S+   +E DS  +S    LNG++++  KS       NLYSQYEEKVRPCIDLIDSLR
Sbjct: 1    MVHSDLGIEELDSPESS----LNGSEDMESKS-------NLYSQYEEKVRPCIDLIDSLR 49

Query: 351  ALGVEQDLALPAIAVIGDQSSGKSSVLEALSGVALPRGSGIVTRCPXXXXXXXXXNEEDE 530
            +LGVEQDLALPAIAVIGDQSSGKSSVLEALSGVALPRGSGIVTRCP         NE DE
Sbjct: 50   SLGVEQDLALPAIAVIGDQSSGKSSVLEALSGVALPRGSGIVTRCPLVLRLKKLGNE-DE 108

Query: 531  WKGKVSYRDSEIELSDASQVEKEVSAAQIAIAGEGVGISHELISLEVSSPHVPDLTLIDL 710
            WKGKVS+ D EIE+ DASQVEKE+S AQIAIAGEG GISHELISLEVSSPHVPDLTLIDL
Sbjct: 109  WKGKVSFLDKEIEIPDASQVEKEISEAQIAIAGEGTGISHELISLEVSSPHVPDLTLIDL 168

Query: 711  PGITRVAVGNQPYDIEYQIKSLIKKYICKQETINLVVVPCNVDIATTEALRMAQEVDPEG 890
            PGITRVAVGNQP DIEYQIKSLI+KYI +QETINLVVVP NVDIATTEALRMAQEVDP+G
Sbjct: 169  PGITRVAVGNQPPDIEYQIKSLIRKYILRQETINLVVVPANVDIATTEALRMAQEVDPQG 228

Query: 891  DRTIGILTKPDLVDKGTEDKIVDVARNLVFHPKKGYMIVKCRGQQDIQDQLSLAKALQKE 1070
            DRTIGILTKPDLVDKGTEDK+VDV RNLVFH KKGYMIVKCRGQQDI+ ++SL KALQ+E
Sbjct: 229  DRTIGILTKPDLVDKGTEDKVVDVVRNLVFHLKKGYMIVKCRGQQDIKHRMSLDKALQRE 288

Query: 1071 QAFFENHAHFRDLLEEGRATIPCLAERLTSELIMHICKTLPLLENQIKESHQKITEELQK 1250
            + FFE+HAHFRDLLEEG+ATIPCLAERLTSELIMHICKTLPLLENQIKE+HQ+ITEELQK
Sbjct: 289  RIFFEDHAHFRDLLEEGKATIPCLAERLTSELIMHICKTLPLLENQIKETHQRITEELQK 348

Query: 1251 YGSDIPEDESGKMFFLIDKIDAFNSDITALIQGEELVVEYECRLFTKMRNEFCKWSAVVE 1430
            YG DIPE+ES KMF LI+KID FN +I + I+GEE V +Y+ RLFTK+R EF KWSAVVE
Sbjct: 349  YGKDIPEEESEKMFCLIEKIDTFNKEIISTIEGEEFVEQYDSRLFTKVRAEFSKWSAVVE 408

Query: 1431 KNFKNGYDAICKQIQLFENQYRGRELPGFVNYKTFETIIKKQVSVLEEPAVDMLHTVTDL 1610
            KNF+ GY+AI K+I+ FEN+YRGRELPGFVNYKTFETIIKKQV VLEEPAVDMLHTVTD+
Sbjct: 409  KNFEKGYEAIRKEIKQFENRYRGRELPGFVNYKTFETIIKKQVRVLEEPAVDMLHTVTDI 468

Query: 1611 VRLAFTDVSETNFNEFFNLHRTAKSKIEDIKLEQEKEAETSIRLHFQMEQIVYCQDQVYR 1790
            +R  FTDVS  +FNEFFNLHRTAKSKIEDI+LEQE EAE SIRLHFQMEQ+VYCQDQVYR
Sbjct: 469  IRNTFTDVSGKHFNEFFNLHRTAKSKIEDIRLEQENEAEKSIRLHFQMEQLVYCQDQVYR 528

Query: 1791 GALQXXXXXXXXXXXXXXSNQYFLXXXXXXXXXXIAEIFQHLIAYHQEVGKRISSHIPLI 1970
             ALQ              SN YF             EIFQHL AY QEV  RIS HIPLI
Sbjct: 529  RALQQVREKEAEEEKNKKSNHYF---QSQVSEPSTDEIFQHLTAYQQEVSTRISGHIPLI 585

Query: 1971 IQFFILRTFGXXXXXXXXXXXXNKDQYDWLLRERSDTSDKRKFLKERLMRLTQARQ 2138
            IQFF+LRT+G            +KDQYDWLL+ER+DT DKRKFLKERL RLT+ARQ
Sbjct: 586  IQFFVLRTYGEQLKKSMLQLLQDKDQYDWLLKERTDTRDKRKFLKERLERLTRARQ 641


>ref|NP_776366.1| interferon-induced GTP-binding protein Mx2 [Bos taurus].
          Length = 710

 Score =  711 bits (1834), Expect = 0.0
 Identities = 374/625 (59%), Positives = 455/625 (72%), Gaps = 4/625 (0%)
 Frame = +3

Query: 276  GPENNLYSQYEEKVRPCIDLIDSLRALGVEQDLALPAIAVIGDQSSGKSSVLEALSGVAL 455
            GPENNLY +YEEKVRPCIDLIDSLRALGVEQDLALPAIAVIGDQSSGKSSVLEALSGVAL
Sbjct: 81   GPENNLYRKYEEKVRPCIDLIDSLRALGVEQDLALPAIAVIGDQSSGKSSVLEALSGVAL 140

Query: 456  PRGSGIVTRCPXXXXXXXXXNEEDEWKGKVSYRDSEIELSDASQVEKEVSAAQIAIAGEG 635
            PRGSGI+TRCP           E EW GK++YR+   +L + S+VE E+  AQ  IAG G
Sbjct: 141  PRGSGIITRCPLVLKLT---KRECEWTGKITYRNITQQLQNPSEVEWEIRRAQNIIAGNG 197

Query: 636  VGISHELISLEVSSPHVPDLTLIDLPGITRVAVGNQPYDIEYQIKSLIKKYICKQETINL 815
            +GISHELI+LE++SP VPDLTLIDLPGITRVAV NQP DI  QIK+LIKKYI +QETINL
Sbjct: 198  LGISHELINLEITSPEVPDLTLIDLPGITRVAVENQPQDIGLQIKALIKKYIQRQETINL 257

Query: 816  VVVPCNVDIATTEALRMAQEVDPEGDRTIGILTKPDLVDKGTEDKIVDVARNLVFHPKKG 995
            VVVPCNVDIATTEAL MAQEVDP+GDRTIGILTKPDLVDKGTE  ++ V +NL +H KKG
Sbjct: 258  VVVPCNVDIATTEALSMAQEVDPDGDRTIGILTKPDLVDKGTEKGVLKVMQNLTYHLKKG 317

Query: 996  YMIVKCRGQQDIQDQLSLAKALQKEQAFFENHAHFRDLLEEGRATIPCLAERLTSELIMH 1175
            YMIVKCRGQQDI ++LSLA+A +KE  FFE H +FR LL+EG+AT+P LAERLT+ELI H
Sbjct: 318  YMIVKCRGQQDITNKLSLAEATRKETMFFETHPYFRILLDEGKATVPLLAERLTTELIWH 377

Query: 1176 ICKTLPLLENQIKESHQKITEELQKYGSDIPEDESGKMFFLIDKIDAFNSDITALIQGEE 1355
            I K+LPLLENQIKE HQ+ TEELQ+YG DIP DE  KMFFLI+KI  FN DI  LI+GEE
Sbjct: 378  INKSLPLLENQIKEKHQRATEELQQYGDDIPSDEGDKMFFLIEKIKVFNEDIGKLIEGEE 437

Query: 1356 LVVEYECRLFTKMRNEFCKWSAVVEKNFKNGYDAICKQIQLFENQYRGRELPGFVNYKTF 1535
            +V+E E RL  K+R EF  W  ++  N +     + +++  +E +YRG+EL GFVNYKTF
Sbjct: 438  IVMETESRLCNKIREEFTSWILILTTNIEKVKSILNEEVSKYEKKYRGKELLGFVNYKTF 497

Query: 1536 ETIIKKQVSVLEEPAVDMLHTVTDLVRLAFTDVSETNFNEFFNLHRTAKSKIEDIKLEQE 1715
            ET++K  +  L +PA+ ML    ++V   F D ++ +F EF NLH+T ++KIEDIK +Q 
Sbjct: 498  ETVVKHYLGQLIDPALKMLQKAMEIVWQTFKDTAKKHFAEFCNLHQTVQNKIEDIKTKQM 557

Query: 1716 KEAETSIRLHFQMEQIVYCQDQVYRGAL----QXXXXXXXXXXXXXXSNQYFLXXXXXXX 1883
             EA   I+L F+ME++V+CQDQ+Y   L    +              S Q FL       
Sbjct: 558  AEAANLIQLQFRMEKLVFCQDQIYGVVLNKVREDIFNSMGKASETPQSKQPFL--NDQSS 615

Query: 1884 XXXIAEIFQHLIAYHQEVGKRISSHIPLIIQFFILRTFGXXXXXXXXXXXXNKDQYDWLL 2063
               I EI  HL AY  E  KR+++ IP IIQ+F+L+  G            +   Y WLL
Sbjct: 616  ISSIVEIGVHLNAYFMETSKRLANQIPFIIQYFMLQENGDKVQKAMMQLLQDTQHYSWLL 675

Query: 2064 RERSDTSDKRKFLKERLMRLTQARQ 2138
            +E+SDT+ KRKFLKE++ RLTQA+Q
Sbjct: 676  QEQSDTATKRKFLKEKIFRLTQAQQ 700


>ref|NP_001070288.1| dynamin-1 [Bos taurus].
          Length = 856

 Score =  235 bits (599), Expect = 2e-61
 Identities = 156/441 (35%), Positives = 235/441 (53%), Gaps = 5/441 (1%)
 Frame = +3

Query: 333  LIDSLRALGVEQDLALPAIAVIGDQSSGKSSVLEALSGVA-LPRGSGIVTRCPXXXXXXX 509
            L D+  A+G   DL LP IAV+G QS+GKSSVLE   G   LPRGSGIVTR P       
Sbjct: 16   LQDAFSAIGQNADLDLPQIAVVGGQSAGKSSVLENFVGRDFLPRGSGIVTRRPLVLQLVN 75

Query: 510  XXNEEDEW---KGKVSYRDSEIELSDASQVEKEVSAAQIAIAGEGVGISHELISLEVSSP 680
               E  E+   KGK        + +D  +V  E+ A    + G   GIS   I+L V SP
Sbjct: 76   ATTEYAEFLHCKGK--------KFTDFEEVRLEIEAETDRVTGTNKGISPVPINLRVYSP 127

Query: 681  HVPDLTLIDLPGITRVAVGNQPYDIEYQIKSLIKKYICKQETINLVVVPCNVDIATTEAL 860
            HV +LTL+DLPG+T+V VG+QP DIE+QI+ ++ +++ K+  + L V P N D+A ++AL
Sbjct: 128  HVLNLTLVDLPGMTKVPVGDQPPDIEFQIRDMLMQFVTKENCLILAVSPANSDLANSDAL 187

Query: 861  RMAQEVDPEGDRTIGILTKPDLVDKGTEDKIVDVARNLVFHPKKGYMIVKCRGQQDIQDQ 1040
            ++A+EVDP+G RTIG++TK DL+D+GT+ +  DV  N +   ++GY+ V  R Q+DI  +
Sbjct: 188  KVAKEVDPQGQRTIGVITKLDLMDEGTDAR--DVLENKLLPLRRGYIGVVNRSQKDIDGK 245

Query: 1041 LSLAKALQKEQAFFENHAHFRDLLEEGRATIPCLAERLTSELIMHICKTLPLLENQIKES 1220
              +  AL  E+ FF +H  +R L +  R   P L + L  +L  HI  TLP L N+++  
Sbjct: 246  KDITAALAAERKFFLSHPSYRHLAD--RMGTPYLQKVLNQQLTNHIRDTLPGLRNKLQSQ 303

Query: 1221 HQKITEELQKYGSDIPEDESGKMFFLIDKIDAFNSDITALIQGE-ELVVEYECRLFTKMR 1397
               I +E+++Y +  P+D + K   L+  +  F  D    I+G  + +  YE     ++ 
Sbjct: 304  LLSIEKEVEEYKNFRPDDPARKTKALLQMVQQFAVDFEKRIEGSGDQIDTYELSGGARIN 363

Query: 1398 NEFCKWSAVVEKNFKNGYDAICKQIQLFENQYRGRELPGFVNYKTFETIIKKQVSVLEEP 1577
              F +         +     + ++I        G     F     FE  +KKQV  L+EP
Sbjct: 364  RIFHERFPFELVKMEFDEKELRREISYAIKNIHGIRTGLFTPDLAFEATVKKQVQKLKEP 423

Query: 1578 AVDMLHTVTDLVRLAFTDVSE 1640
            ++  +  V   +       SE
Sbjct: 424  SIKCVDMVVSELTATIRKCSE 444


>ref|NP_001092839.1| dynamin-2 [Bos taurus].
          Length = 866

 Score =  232 bits (592), Expect = 1e-60
 Identities = 167/487 (34%), Positives = 259/487 (53%), Gaps = 10/487 (2%)
 Frame = +3

Query: 309  EKVRPCID-LIDSLRALGVEQDLALPAIAVIGDQSSGKSSVLEALSGVA-LPRGSGIVTR 482
            E++ P ++ L D+  ++G    L LP IAV+G QS+GKSSVLE   G   LPRGSGIVTR
Sbjct: 7    EELIPLVNKLQDAFSSIGQSCHLDLPQIAVVGGQSAGKSSVLENFVGRDFLPRGSGIVTR 66

Query: 483  CPXXXXXXXXXNEEDEWKGKVSYRDSEIELSDASQVEKEVSAAQIAIAGEGVGISHELIS 662
             P          E  E+    S + ++ E     +V +E+ A    + G   GIS   I+
Sbjct: 67   RPLILQLIFSKTEYAEFLHCKSRKFTDFE-----EVRQEIEAETDRVTGTNKGISPVPIN 121

Query: 663  LEVSSPHVPDLTLIDLPGITRVAVGNQPYDIEYQIKSLIKKYICKQETINLVVVPCNVDI 842
            L + SPHV +LTLIDLPGIT+V VG+QP DIEYQIK +I ++I ++ ++ L V P N+D+
Sbjct: 122  LRIYSPHVLNLTLIDLPGITKVPVGDQPQDIEYQIKDMILQFISRESSLILAVTPANMDL 181

Query: 843  ATTEALRMAQEVDPEGDRTIGILTKPDLVDKGTEDKIVDVARNLVFHPKKGYMIVKCRGQ 1022
            A ++AL++A+EVDP+G RTIG++TK DL+D+GT+ +  DV  N +   ++GY+ V  R Q
Sbjct: 182  ANSDALKLAKEVDPQGLRTIGVITKLDLMDEGTDAR--DVLENKLLPLRRGYIGVVNRSQ 239

Query: 1023 QDIQDQLSLAKALQKEQAFFENHAHFRDLLEEGRATIPCLAERLTSELIMHICKTLPLLE 1202
            +DI+ +  +  AL  E+ FF +H  +R + +  R   P L + L  +L  HI ++LP L 
Sbjct: 240  KDIEGKKDIRTALAAERKFFLSHPAYRHIAD--RMGTPHLQKTLNQQLTNHIRESLPALR 297

Query: 1203 NQIKESHQKITEELQKYGSDIPEDESGKMFFLIDKIDAFNSDITALIQG-----EELVVE 1367
            ++++     + +E+++Y +  P+D + K   L+  +  F  D    I+G     + L + 
Sbjct: 298  SKLQSQLLSLEKEVEEYKNFRPDDPTRKTKALLQMVQQFGVDFEKRIEGSGDQVDTLELS 357

Query: 1368 YECRLFTKMRNEFCKWSAVVEKNFKNGYDAICKQIQLFENQYRGRELPGFVNYKTFETII 1547
               R+       F      +E + K+    + ++I        G     F     FE I+
Sbjct: 358  GGARINRIFHERFPFELVKMEFDEKD----LRREISYAIKNIHGVRTGLFTPDLAFEAIV 413

Query: 1548 KKQVSVLEEPAVDMLHTVTDLVRLAFTDVSETNFNEFFNLHRTAKSKIED---IKLEQEK 1718
            KKQV  L+EP +  +    DLV             E  N  R   SK+     ++ E E+
Sbjct: 414  KKQVVKLKEPCLKCV----DLV-----------IQELINTVRQCTSKLSSYPRLREETER 458

Query: 1719 EAETSIR 1739
               T IR
Sbjct: 459  IVTTYIR 465


>ref|NP_001230213.1| dynamin 3 [Bos taurus].
          Length = 858

 Score =  226 bits (575), Expect = 1e-58
 Identities = 158/437 (36%), Positives = 233/437 (53%), Gaps = 6/437 (1%)
 Frame = +3

Query: 309  EKVRPCID-LIDSLRALGVEQDLALPAIAVIGDQSSGKSSVLEALSGVA-LPRGSGIVTR 482
            E++ P ++ L D+  ALG    L LP IAV+G QS+GKSSVLE   G   LPRGSGIVTR
Sbjct: 7    EELIPLVNRLQDAFSALGQSCLLELPQIAVVGGQSAGKSSVLENFVGRDFLPRGSGIVTR 66

Query: 483  CPXXXXXXXXXNEEDEW---KGKVSYRDSEIELSDASQVEKEVSAAQIAIAGEGVGISHE 653
             P          E  E+   KGK        + +D  +V  E+ A    + G   GIS  
Sbjct: 67   RPLVLQLITSKAEYAEFLHCKGK--------KFTDFDEVRHEIEAETDRVTGMNKGISSI 118

Query: 654  LISLEVSSPHVPDLTLIDLPGITRVAVGNQPYDIEYQIKSLIKKYICKQETINLVVVPCN 833
             I+L V SPHV +LTLIDLPGIT+V VG+QP DIEYQI+ +I ++I ++  + L V P N
Sbjct: 119  PINLRVYSPHVLNLTLIDLPGITKVPVGDQPPDIEYQIREMIMQFITRENCLILAVTPAN 178

Query: 834  VDIATTEALRMAQEVDPEGDRTIGILTKPDLVDKGTEDKIVDVARNLVFHPKKGYMIVKC 1013
             D+A ++AL++A+EVDP+G RTIG++TK DL+D+GT+ +  DV  N +   ++GY+ V  
Sbjct: 179  TDLANSDALKLAKEVDPQGLRTIGVITKLDLMDEGTDAR--DVLENKLLPLRRGYVGVVN 236

Query: 1014 RGQQDIQDQLSLAKALQKEQAFFENHAHFRDLLEEGRATIPCLAERLTSELIMHICKTLP 1193
            R Q+DI  +  +  A+  E+ FF +H  +R + +  R   P L + L  +L  HI  TLP
Sbjct: 237  RSQKDIDGKKDIKAAMLAERKFFLSHPAYRHIAD--RMGTPHLQKVLNQQLTNHIRDTLP 294

Query: 1194 LLENQIKESHQKITEELQKYGSDIPEDESGKMFFLIDKIDAFNSDITALIQGE-ELVVEY 1370
               N+++     I  E++ Y +  PED + K   L+  +  F  D    I+G  + V   
Sbjct: 295  NFRNKLQGQLLSIEHEVEAYKNFKPEDPTRKTKALLQMVQQFAVDFEKRIEGSGDQVDTL 354

Query: 1371 ECRLFTKMRNEFCKWSAVVEKNFKNGYDAICKQIQLFENQYRGRELPGFVNYKTFETIIK 1550
            E     K+   F +         +     + ++I        G     F     FE I+K
Sbjct: 355  ELSGGAKINRIFHERFPFEIVKMEFNEKELRREISYAIKNIHGIRTGLFTPDMAFEAIVK 414

Query: 1551 KQVSVLEEPAVDMLHTV 1601
            KQ+  L+ P++  +  V
Sbjct: 415  KQIVKLKGPSLKSVDLV 431


>ref|NP_001039959.1| dynamin-1-like protein [Bos taurus].
          Length = 749

 Score =  181 bits (460), Expect = 2e-45
 Identities = 150/468 (32%), Positives = 229/468 (48%), Gaps = 35/468 (7%)
 Frame = +3

Query: 372  LALPAIAVIGDQSSGKSSVLEALSG-VALPRGSGIVTRCPXXXXXXXXXNEE-------- 524
            + LP I V+G QSSGKSSVLE+L G   LPRG+GIVTR P          E+        
Sbjct: 23   IQLPQIVVVGTQSSGKSSVLESLVGRDLLPRGTGIVTRRPLILQLVHVAPEDKRKTTGEE 82

Query: 525  ------------------DEWKGKVSYRDSEIELSDASQVEKEVSAAQIAIAGEGVGISH 650
                              +EW GK  +  +++  +D  ++ +E+      I+G   G+S 
Sbjct: 83   NDPATWKNSRHLSKGVEAEEW-GKFLHTKNKL-YTDFDEIRQEIENETERISGNNKGVSP 140

Query: 651  ELISLEVSSPHVPDLTLIDLPGITRVAVGNQPYDIEYQIKSLIKKYICKQETINLVVVPC 830
            E I L++ SP+V +LTL+DLPG+T+V VG+QP DIE QI+ LI ++I    +I L V   
Sbjct: 141  EPIHLKIFSPNVVNLTLVDLPGMTKVPVGDQPKDIELQIRELILRFISNPNSIILAVTAA 200

Query: 831  NVDIATTEALRMAQEVDPEGDRTIGILTKPDLVDKGTEDKIVDVARNLVFHPKKGYMIVK 1010
            N D+AT+EAL++++EVDP+G RT+ ++TK DL+D GT+   +DV    V   K G + V 
Sbjct: 201  NTDMATSEALKISREVDPDGRRTLAVITKLDLMDAGTD--AMDVLMGRVIPVKLGIIGVV 258

Query: 1011 CRGQQDIQDQLSLAKALQKEQAFFENHAHFRDLLEEGRATIPCLAERLTSELIMHICKTL 1190
             R Q DI ++ S+  +++ E AF +    +  L    R     LA  L   L+ HI   L
Sbjct: 259  NRSQLDINNKKSVTDSIRDEYAFLQK--KYPSL--ANRNGTKYLARTLNRLLMHHIRDCL 314

Query: 1191 PLLENQIKESHQKITEELQKYGSDIPEDESGKMFFLIDKIDAFNSDITALIQGEELVVEY 1370
            P L+ +I     +    L  YG  + +D+S  +  LI K   F ++    I+G    +E 
Sbjct: 315  PELKTRINVLAAQYQSLLNSYGEPV-DDKSATLLQLITK---FATEYCNTIEGTAKYIET 370

Query: 1371 E-----CRLFTKMRNEFCKWSAVVEKNFKNGYDAICKQIQLFENQYRGRELPGFVNYKTF 1535
                   R+       F +    V+     G + I   I        G     FV   +F
Sbjct: 371  SELCGGARICYIFHETFGRTLESVDP--LGGLNTI--DILTAIRNATGPRPALFVPEVSF 426

Query: 1536 ETIIKKQVSVLEEPA---VDMLHTVTDLVRLAFTDVSETNFNEFFNLH 1670
            E ++K+Q+  LEEP+   V+++H     +    ++ S      F  LH
Sbjct: 427  ELLVKRQIKRLEEPSLRCVELVHEEMQRIIQHCSNYSTQELLRFPKLH 474


>ref|NP_001179890.1| dynamin-like 120 kDa protein, mitochondrial [Bos taurus].
          Length = 997

 Score = 94.7 bits (234), Expect = 3e-19
 Identities = 90/333 (27%), Positives = 146/333 (43%), Gaps = 7/333 (2%)
 Frame = +3

Query: 111  QRHSVKEKEGTFQLN*S--RKKMVYSNCESKEPDSVSASNHLLLNGNDELVEKSHKTGPE 284
            Q+  V +KE   QL       ++ Y     +          L+L  +D+ +   H    +
Sbjct: 242  QKRKVSDKEKIDQLQEELLHTQLKYQRILERLEKENKELRKLVLQKDDKGI---HHRKLK 298

Query: 285  NNLYSQYEEKVRPCIDLIDSLRALGVEQDLALPAIAVIGDQSSGKSSVLEALSGVAL-PR 461
             +L   Y E     +D++    A    QD  LP + V+GDQS+GK+SVLE ++   + PR
Sbjct: 299  KSLIDMYSE----VLDVLSDYDASYNTQD-HLPRVVVVGDQSAGKTSVLEMIAQARIFPR 353

Query: 462  GSG-IVTRCPXXXXXXXXXNEEDEWKGKVSYRDSEIELSDASQVEKEVSAAQIAIAGEGV 638
            GSG ++TR P         +    +K      D   E  D + +  E+         EG 
Sbjct: 354  GSGEMMTRSPVKVTLSEGPHHVALFKDSSREFDLTKE-EDLAALRHEIELRMRKNVKEGC 412

Query: 639  GISHELISLEVSSPHVPDLTLIDLPGITRVAVGNQPYDIEYQIKSLIKKYICKQETINLV 818
             +S E ISL V  P +  + L+DLPG+          D +  I S+ K Y+     I L 
Sbjct: 413  TVSPETISLNVKGPGLQRMVLVDLPGVINTVTSGMAPDTKETIFSISKAYMQNPNAIILC 472

Query: 819  VVPCNVDIATTEALRMAQEVDPEGDRTIGILTKPDLVDKG--TEDKIVDVARNLVFHPKK 992
            +   +VD   +    +  ++DP G RTI +LTK DL +K   +  +I  +    +F  K 
Sbjct: 473  IQDGSVDAERSIVTDLVSQMDPHGRRTIFVLTKVDLAEKNVTSPSRIQQIIEGKLFPMKA 532

Query: 993  -GYMIVKCRGQQDIQDQLSLAKALQKEQAFFEN 1088
             GY  V   G+ +  + +   +  ++E  FF+N
Sbjct: 533  LGYFAV-VTGKGNSSESIEAIRDYEEE--FFQN 562


>ref|XP_002684877.1| PREDICTED: optic atrophy 1 homolog [Bos taurus].
          Length = 997

 Score = 94.7 bits (234), Expect = 3e-19
 Identities = 90/333 (27%), Positives = 146/333 (43%), Gaps = 7/333 (2%)
 Frame = +3

Query: 111  QRHSVKEKEGTFQLN*S--RKKMVYSNCESKEPDSVSASNHLLLNGNDELVEKSHKTGPE 284
            Q+  V +KE   QL       ++ Y     +          L+L  +D+ +   H    +
Sbjct: 242  QKRKVSDKEKIDQLQEELLHTQLKYQRILERLEKENKELRKLVLQKDDKGI---HHRKLK 298

Query: 285  NNLYSQYEEKVRPCIDLIDSLRALGVEQDLALPAIAVIGDQSSGKSSVLEALSGVAL-PR 461
             +L   Y E     +D++    A    QD  LP + V+GDQS+GK+SVLE ++   + PR
Sbjct: 299  KSLIDMYSE----VLDVLSDYDASYNTQD-HLPRVVVVGDQSAGKTSVLEMIAQARIFPR 353

Query: 462  GSG-IVTRCPXXXXXXXXXNEEDEWKGKVSYRDSEIELSDASQVEKEVSAAQIAIAGEGV 638
            GSG ++TR P         +    +K      D   E  D + +  E+         EG 
Sbjct: 354  GSGEMMTRSPVKVTLSEGPHHVALFKDSSREFDLTKE-EDLAALRHEIELRMRKNVKEGC 412

Query: 639  GISHELISLEVSSPHVPDLTLIDLPGITRVAVGNQPYDIEYQIKSLIKKYICKQETINLV 818
             +S E ISL V  P +  + L+DLPG+          D +  I S+ K Y+     I L 
Sbjct: 413  TVSPETISLNVKGPGLQRMVLVDLPGVINTVTSGMAPDTKETIFSISKAYMQNPNAIILC 472

Query: 819  VVPCNVDIATTEALRMAQEVDPEGDRTIGILTKPDLVDKG--TEDKIVDVARNLVFHPKK 992
            +   +VD   +    +  ++DP G RTI +LTK DL +K   +  +I  +    +F  K 
Sbjct: 473  IQDGSVDAERSIVTDLVSQMDPHGRRTIFVLTKVDLAEKNVTSPSRIQQIIEGKLFPMKA 532

Query: 993  -GYMIVKCRGQQDIQDQLSLAKALQKEQAFFEN 1088
             GY  V   G+ +  + +   +  ++E  FF+N
Sbjct: 533  LGYFAV-VTGKGNSSESIEAIRDYEEE--FFQN 562


  Database: RefSeq49_BP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 17,681,374
  Number of sequences in database:  33,088
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 81,953,180
Number of extensions: 1972363
Number of successful extensions: 7124
Number of sequences better than 1.0e-05: 8
Number of HSP's gapped: 7093
Number of HSP's successfully gapped: 8
Length of query: 828
Length of database: 17,681,374
Length adjustment: 111
Effective length of query: 717
Effective length of database: 14,008,606
Effective search space: 10044170502
Effective search space used: 10044170502
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

Search to RefSeqCP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-000493
         (2486 letters)

Database: RefSeq49_CP.fasta 
           33,336 sequences; 18,874,504 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001003134.1| interferon-induced GTP-binding protein Mx1 [...   902   0.0  
Alignment   gi|NP_001003133.1| interferon-induced GTP-binding protein Mx2 [...   719   0.0  
Alignment   gi|XP_867906.1| PREDICTED: similar to Dynamin-2 (Dynamin UDNM) ...   236   8e-62
Alignment   gi|XP_867977.1| PREDICTED: similar to dynamin 2 isoform 2 isofo...   235   1e-61
Alignment   gi|XP_868105.1| PREDICTED: similar to dynamin 2 isoform 2 isofo...   235   2e-61
Alignment   gi|XP_868098.1| PREDICTED: similar to dynamin 2 isoform 4 isofo...   235   2e-61
Alignment   gi|XP_867921.1| PREDICTED: similar to dynamin 2 isoform 2 isofo...   235   2e-61
Alignment   gi|XP_868023.1| PREDICTED: similar to dynamin 2 isoform 2 isofo...   233   5e-61
Alignment   gi|XP_868019.1| PREDICTED: similar to dynamin 2 isoform 2 isofo...   233   5e-61
Alignment   gi|NP_001124521.1| dynamin-1 [Canis lupus familiaris].               233   9e-61

>ref|NP_001003134.1| interferon-induced GTP-binding protein Mx1 [Canis lupus familiaris].
          Length = 657

 Score =  902 bits (2331), Expect = 0.0
 Identities = 470/652 (72%), Positives = 530/652 (81%)
 Frame = +3

Query: 183  NCESKEPDSVSASNHLLLNGNDELVEKSHKTGPENNLYSQYEEKVRPCIDLIDSLRALGV 362
            N + K  DS    NH+LLNG  +  EK+   G  N+L SQYEEKVRPCIDLIDSLRALGV
Sbjct: 3    NSQGKITDSNPVPNHVLLNGLTDKAEKNQGIG--NSLCSQYEEKVRPCIDLIDSLRALGV 60

Query: 363  EQDLALPAIAVIGDQSSGKSSVLEALSGVALPRGSGIVTRCPXXXXXXXXXNEEDEWKGK 542
            EQDLALPAIAVIGDQSSGKSSVLEALSGVALPRGSGIVTRCP         NE DEW+GK
Sbjct: 61   EQDLALPAIAVIGDQSSGKSSVLEALSGVALPRGSGIVTRCPLVLKLKKLINE-DEWRGK 119

Query: 543  VSYRDSEIELSDASQVEKEVSAAQIAIAGEGVGISHELISLEVSSPHVPDLTLIDLPGIT 722
            VSY+D+E+E+SD S+VE E++ AQ AIAGEG GISHELISLEVSSPHVPDLTLIDLPGIT
Sbjct: 120  VSYQDTEMEISDPSEVEVEINKAQDAIAGEGQGISHELISLEVSSPHVPDLTLIDLPGIT 179

Query: 723  RVAVGNQPYDIEYQIKSLIKKYICKQETINLVVVPCNVDIATTEALRMAQEVDPEGDRTI 902
            RVAVGNQP DI  Q K LI+KYI KQETINLVVVPCNVDIATTEAL MAQEVDP+GDRTI
Sbjct: 180  RVAVGNQPADIGRQTKQLIRKYILKQETINLVVVPCNVDIATTEALSMAQEVDPDGDRTI 239

Query: 903  GILTKPDLVDKGTEDKIVDVARNLVFHPKKGYMIVKCRGQQDIQDQLSLAKALQKEQAFF 1082
            GILTKPDLVD+GTE K+VDVA+NLV H KKGYMIVKCRGQQDIQDQ+SLA+ALQKE+ FF
Sbjct: 240  GILTKPDLVDRGTEGKVVDVAQNLVCHLKKGYMIVKCRGQQDIQDQVSLAEALQKEKDFF 299

Query: 1083 ENHAHFRDLLEEGRATIPCLAERLTSELIMHICKTLPLLENQIKESHQKITEELQKYGSD 1262
            E+H HFR LLEEGRAT+P LAE+LTSELI HICKTLPLLENQIKE+H+KITEELQKYGSD
Sbjct: 300  EDHPHFRVLLEEGRATVPNLAEKLTSELITHICKTLPLLENQIKENHEKITEELQKYGSD 359

Query: 1263 IPEDESGKMFFLIDKIDAFNSDITALIQGEELVVEYECRLFTKMRNEFCKWSAVVEKNFK 1442
            +PEDE  KMFFLIDK++AFN DI++LIQGEE V E E RLFTK+RNEF KWSAV+EK F+
Sbjct: 360  VPEDEHEKMFFLIDKLNAFNQDISSLIQGEESVGEDESRLFTKIRNEFHKWSAVIEKKFQ 419

Query: 1443 NGYDAICKQIQLFENQYRGRELPGFVNYKTFETIIKKQVSVLEEPAVDMLHTVTDLVRLA 1622
             GY AI KQ++ FEN+YRGRELPGFVNYKTFE IIK+Q+  LEEPAVDMLHT+TD+V++A
Sbjct: 420  RGYKAIYKQMEKFENRYRGRELPGFVNYKTFEIIIKQQIKELEEPAVDMLHTITDMVQVA 479

Query: 1623 FTDVSETNFNEFFNLHRTAKSKIEDIKLEQEKEAETSIRLHFQMEQIVYCQDQVYRGALQ 1802
            F D+S+ NF+EFFNL+RT KSKIEDIK E EKEAE SIRLHFQMEQIVYCQD VY+ ALQ
Sbjct: 480  FGDISKANFDEFFNLYRTTKSKIEDIKFELEKEAEKSIRLHFQMEQIVYCQDHVYQRALQ 539

Query: 1803 XXXXXXXXXXXXXXSNQYFLXXXXXXXXXXIAEIFQHLIAYHQEVGKRISSHIPLIIQFF 1982
                          ++              ++EI +HL+AY QE   RISSHIPLIIQ+F
Sbjct: 540  RVREKDSDEEKKKKTSS-MSHDEVSSVNISLSEILEHLLAYRQEATNRISSHIPLIIQYF 598

Query: 1983 ILRTFGXXXXXXXXXXXXNKDQYDWLLRERSDTSDKRKFLKERLMRLTQARQ 2138
            IL+ +G            +KD Y WLL+ERSDTSDKRKFLKERL RL QAR+
Sbjct: 599  ILQVYGQKLQNGMLQLLQDKDTYSWLLKERSDTSDKRKFLKERLARLAQARR 650


>ref|NP_001003133.1| interferon-induced GTP-binding protein Mx2 [Canis lupus familiaris].
          Length = 711

 Score =  719 bits (1856), Expect = 0.0
 Identities = 379/667 (56%), Positives = 478/667 (71%), Gaps = 7/667 (1%)
 Frame = +3

Query: 159  SRKKMVYSNCESKEPDSVSASNHL-LLNGNDELVEKSHKT----GPENNLYSQYEEKVRP 323
            +R+ M   NC+    D V  +    LL  N + +E S       GPE +LYSQYE+KVRP
Sbjct: 40   ARQMMYPPNCQVGVQDPVYLAKEFNLLTLNPQQLEGSRHQQMAKGPEKSLYSQYEQKVRP 99

Query: 324  CIDLIDSLRALGVEQDLALPAIAVIGDQSSGKSSVLEALSGVALPRGSGIVTRCPXXXXX 503
            CIDL+DSLRALGVEQDLALPAIAVIGDQSSGKSSVLEALSGVALPRGSGIVTRCP     
Sbjct: 100  CIDLVDSLRALGVEQDLALPAIAVIGDQSSGKSSVLEALSGVALPRGSGIVTRCPLVLKL 159

Query: 504  XXXXNEEDEWKGKVSYRDSEIELSDASQVEKEVSAAQIAIAGEGVGISHELISLEVSSPH 683
                ++   W+G++SYR +E++  D SQVEKE+  AQ  IAG+G+GISHELISLE++SP 
Sbjct: 160  KRDPHKA--WRGRISYRKTELQFQDPSQVEKEIRQAQNIIAGQGLGISHELISLEITSPE 217

Query: 684  VPDLTLIDLPGITRVAVGNQPYDIEYQIKSLIKKYICKQETINLVVVPCNVDIATTEALR 863
            VPDLTLIDLPGITRVAVGNQP DI  QIK+LIK YI KQETINLVVVPCNVDIATTEAL 
Sbjct: 218  VPDLTLIDLPGITRVAVGNQPQDIGVQIKALIKNYIQKQETINLVVVPCNVDIATTEALS 277

Query: 864  MAQEVDPEGDRTIGILTKPDLVDKGTEDKIVDVARNLVFHPKKGYMIVKCRGQQDIQDQL 1043
            MAQEVDP GDRTIG+LTKPDLVD+GTE  +V+VA+NL +H +KGYMIV+CRGQ++I +QL
Sbjct: 278  MAQEVDPNGDRTIGVLTKPDLVDRGTEKTVVNVAQNLTYHLQKGYMIVRCRGQEEITNQL 337

Query: 1044 SLAKALQKEQAFFENHAHFRDLLEEGRATIPCLAERLTSELIMHICKTLPLLENQIKESH 1223
            SLA+A +KE+ FF+ H +FR LLEEG+AT+PCLAERLT ELI+HI K+LPLLE QI+ESH
Sbjct: 338  SLAEATEKERMFFQTHPYFRALLEEGKATVPCLAERLTKELILHINKSLPLLEKQIRESH 397

Query: 1224 QKITEELQKYGSDIPEDESGKMFFLIDKIDAFNSDITALIQGEELVVEYECRLFTKMRNE 1403
            Q+ T+EL + G  IP +E+ KMFFLI+KI  FN DI  LI+GEE+V + E RL+ K+R E
Sbjct: 398  QRATDELHQCGDSIPSNEADKMFFLIEKIKLFNQDIDKLIEGEEIVKKNETRLYNKIREE 457

Query: 1404 FCKWSAVVEKNFKNGYDAICKQIQLFENQYRGRELPGFVNYKTFETIIKKQVSVLEEPAV 1583
            F  W+ V+  N +   + + +++ ++E QYRG+EL GFVNYKTFETI+ + +  L EPA+
Sbjct: 458  FEHWALVLTANTQKVKNIVSEEVSVYEKQYRGKELLGFVNYKTFETIVHQYIEQLVEPAL 517

Query: 1584 DMLHTVTDLVRLAFTDVSETNFNEFFNLHRTAKSKIEDIKLEQEKEAETSIRLHFQMEQI 1763
             ML    ++V  AFTD ++ +F+ F NL +T ++KIEDIK  Q + AE  IRL F+MEQ+
Sbjct: 518  TMLRKTIEIVWQAFTDTAKKHFSVFSNLSQTIQNKIEDIKTRQAETAENLIRLQFRMEQL 577

Query: 1764 VYCQDQVYRGALQXXXXXXXXXXXXXXSNQY--FLXXXXXXXXXXIAEIFQHLIAYHQEV 1937
            VYCQDQ+Y   L+               +    F             EI  HL AY  E 
Sbjct: 578  VYCQDQIYSVVLRKVRKEVFNPAGKAAQDLQLKFPFPKDLPSMSSNDEIGVHLNAYFLET 637

Query: 1938 GKRISSHIPLIIQFFILRTFGXXXXXXXXXXXXNKDQYDWLLRERSDTSDKRKFLKERLM 2117
             KR+++ IP IIQ+F+L+  G             ++QY WLL+E +DTS KR+FLKE++ 
Sbjct: 638  SKRLANQIPFIIQYFVLQENGSCLQKAMMQILQEREQYSWLLQEHADTSAKRRFLKEKIY 697

Query: 2118 RLTQARQ 2138
            RL QAR+
Sbjct: 698  RLAQARR 704


>ref|XP_867906.1| PREDICTED: similar to Dynamin-2 (Dynamin UDNM) isoform 4 [Canis
            familiaris].
          Length = 875

 Score =  236 bits (602), Expect = 8e-62
 Identities = 164/492 (33%), Positives = 262/492 (53%), Gaps = 8/492 (1%)
 Frame = +3

Query: 309  EKVRPCID-LIDSLRALGVEQDLALPAIAVIGDQSSGKSSVLEALSGVA-LPRGSGIVTR 482
            E++ P ++ L D+  ++G    L LP IAV+G QS+GKSSVLE   G   LPRGSGIVTR
Sbjct: 7    EELIPLVNKLQDAFSSIGQSCHLDLPQIAVVGGQSAGKSSVLENFVGRDFLPRGSGIVTR 66

Query: 483  CPXXXXXXXXXNEEDEWKGKVSYRDSEIELSDASQVEKEVSAAQIAIAGEGVGISHELIS 662
             P              W G+ +Y    +  +D  +V +E+ A    + G   GIS   I+
Sbjct: 67   RPLILQLIFSKTGTAAW-GETAYSPGSV-FTDFDEVRQEIEAETDRVTGTNKGISPVPIN 124

Query: 663  LEVSSPHVPDLTLIDLPGITRVAVGNQPYDIEYQIKSLIKKYICKQETINLVVVPCNVDI 842
            L V SPHV +LTLIDLPGIT+V VG+QP DIEYQIK +I ++I ++ ++ L V P N+D+
Sbjct: 125  LRVYSPHVLNLTLIDLPGITKVPVGDQPPDIEYQIKDMILQFISRESSLILAVTPANMDL 184

Query: 843  ATTEALRMAQEVDPEGDRTIGILTKPDLVDKGTEDKIVDVARNLVFHPKKGYMIVKCRGQ 1022
            A ++AL++A+EVDP+G RTIG++TK DL+D+GT+ +  D+  N +   ++GY+ V  R Q
Sbjct: 185  ANSDALKLAKEVDPQGLRTIGVITKLDLMDEGTDAR--DILENKLLPLRRGYIGVVNRSQ 242

Query: 1023 QDIQDQLSLAKALQKEQAFFENHAHFRDLLEEGRATIPCLAERLTSELIMHICKTLPLLE 1202
            +DI+ +  +  AL  E+ FF +H  +R + +  R   P L + L  +L  HI ++LP L 
Sbjct: 243  KDIEGKKDIRAALAAERKFFLSHPAYRHMAD--RMGTPHLQKTLNQQLTNHIRESLPALR 300

Query: 1203 NQIKESHQKITEELQKYGSDIPEDESGKMFFLIDKIDAFNSDITALIQG-----EELVVE 1367
            ++++     + +E+++Y +  P+D + K   L+  +  F  D    I+G     + L + 
Sbjct: 301  SKLQSQLLSLEKEVEEYKNFRPDDPTRKTKALLQMVQQFGVDFEKRIEGSGDQVDTLELS 360

Query: 1368 YECRLFTKMRNEFCKWSAVVEKNFKNGYDAICKQIQLFENQYRGRELPGFVNYKTFETII 1547
               R+       F      +E + K+    + ++I        G     F     FE I+
Sbjct: 361  GGARINRIFHERFPFELVKMEFDEKD----LRREISYAIKNIHGVRTGLFTPDLAFEAIV 416

Query: 1548 KKQVSVLEEPAVDMLH-TVTDLVRLAFTDVSETNFNEFFNLHRTAKSKIEDIKLEQEKEA 1724
            KKQV  L+EP +  +   + +L+       S+   N +  L    +  +     E+E   
Sbjct: 417  KKQVVKLKEPCLKCVDLVIQELINTVRQCTSK--LNSYPRLREETERIVTTYIREREGRT 474

Query: 1725 ETSIRLHFQMEQ 1760
            +  I L   +EQ
Sbjct: 475  KDQILLLIDIEQ 486


>ref|XP_867977.1| PREDICTED: similar to dynamin 2 isoform 2 isoform 16 [Canis
            familiaris].
          Length = 892

 Score =  235 bits (600), Expect = 1e-61
 Identities = 165/506 (32%), Positives = 261/506 (51%), Gaps = 22/506 (4%)
 Frame = +3

Query: 309  EKVRPCID-LIDSLRALGVEQDLALPAIAVIGDQSSGKSSVLEALSGVA-LPRGSGIVTR 482
            E++ P ++ L D+  ++G    L LP IAV+G QS+GKSSVLE   G   LPRGSGIVTR
Sbjct: 7    EELIPLVNKLQDAFSSIGQSCHLDLPQIAVVGGQSAGKSSVLENFVGRDFLPRGSGIVTR 66

Query: 483  CPXXXXXXXXXNEEDEWKGKVSYRDSEIEL---------------SDASQVEKEVSAAQI 617
             P          E     G V +R     L               +D  +V +E+ A   
Sbjct: 67   RPLILQLIFSKTESRTGLGPVGFRSPFSSLPGEYAEFLHCKSKKFTDFDEVRQEIEAETD 126

Query: 618  AIAGEGVGISHELISLEVSSPHVPDLTLIDLPGITRVAVGNQPYDIEYQIKSLIKKYICK 797
             + G   GIS   I+L V SPHV +LTLIDLPGIT+V VG+QP DIEYQIK +I ++I +
Sbjct: 127  RVTGTNKGISPVPINLRVYSPHVLNLTLIDLPGITKVPVGDQPPDIEYQIKDMILQFISR 186

Query: 798  QETINLVVVPCNVDIATTEALRMAQEVDPEGDRTIGILTKPDLVDKGTEDKIVDVARNLV 977
            + ++ L V P N+D+A ++AL++A+EVDP+G RTIG++TK DL+D+GT+ +  D+  N +
Sbjct: 187  ESSLILAVTPANMDLANSDALKLAKEVDPQGLRTIGVITKLDLMDEGTDAR--DILENKL 244

Query: 978  FHPKKGYMIVKCRGQQDIQDQLSLAKALQKEQAFFENHAHFRDLLEEGRATIPCLAERLT 1157
               ++GY+ V  R Q+DI+ +  +  AL  E+ FF +H  +R + +  R   P L + L 
Sbjct: 245  LPLRRGYIGVVNRSQKDIEGKKDIRAALAAERKFFLSHPAYRHMAD--RMGTPHLQKTLN 302

Query: 1158 SELIMHICKTLPLLENQIKESHQKITEELQKYGSDIPEDESGKMFFLIDKIDAFNSDITA 1337
             +L  HI ++LP L ++++     + +E+++Y +  P+D + K   L+  +  F  D   
Sbjct: 303  QQLTNHIRESLPALRSKLQSQLLSLEKEVEEYKNFRPDDPTRKTKALLQMVQQFGVDFEK 362

Query: 1338 LIQG-----EELVVEYECRLFTKMRNEFCKWSAVVEKNFKNGYDAICKQIQLFENQYRGR 1502
             I+G     + L +    R+       F      +E + K+    + ++I        G 
Sbjct: 363  RIEGSGDQVDTLELSGGARINRIFHERFPFELVKMEFDEKD----LRREISYAIKNIHGV 418

Query: 1503 ELPGFVNYKTFETIIKKQVSVLEEPAVDMLHTVTDLVRLAFTDVSETNFNEFFNLHRTAK 1682
                F     FE I+KKQ+  L+EP++  +  V   +       +E   N +  L    +
Sbjct: 419  RTGLFTPDMAFEAIVKKQIVKLKEPSLKCVDLVVSELATVIKKCAE-KLNSYPRLREETE 477

Query: 1683 SKIEDIKLEQEKEAETSIRLHFQMEQ 1760
              +     E+E   +  I L   +EQ
Sbjct: 478  RIVTTYIREREGRTKDQILLLIDIEQ 503


>ref|XP_868105.1| PREDICTED: similar to dynamin 2 isoform 2 isoform 44 [Canis
            familiaris].
          Length = 872

 Score =  235 bits (599), Expect = 2e-61
 Identities = 163/491 (33%), Positives = 260/491 (52%), Gaps = 7/491 (1%)
 Frame = +3

Query: 309  EKVRPCID-LIDSLRALGVEQDLALPAIAVIGDQSSGKSSVLEALSGVA-LPRGSGIVTR 482
            E++ P ++ L D+  ++G    L LP IAV+G QS+GKSSVLE   G   LPRGSGIVTR
Sbjct: 7    EELIPLVNKLQDAFSSIGQSCHLDLPQIAVVGGQSAGKSSVLENFVGRDFLPRGSGIVTR 66

Query: 483  CPXXXXXXXXXNEEDEWKGKVSYRDSEIELSDASQVEKEVSAAQIAIAGEGVGISHELIS 662
             P          E  E+    S +      +D  +V +E+ A    + G   GIS   I+
Sbjct: 67   RPLILQLIFSKTEYAEFLHCKSKK-----FTDFDEVRQEIEAETDRVTGTNKGISPVPIN 121

Query: 663  LEVSSPHVPDLTLIDLPGITRVAVGNQPYDIEYQIKSLIKKYICKQETINLVVVPCNVDI 842
            L V SPHV +LTLIDLPGIT+V VG+QP DIEYQIK +I ++I ++ ++ L V P N+D+
Sbjct: 122  LRVYSPHVLNLTLIDLPGITKVPVGDQPPDIEYQIKDMILQFISRESSLILAVTPANMDL 181

Query: 843  ATTEALRMAQEVDPEGDRTIGILTKPDLVDKGTEDKIVDVARNLVFHPKKGYMIVKCRGQ 1022
            A ++AL++A+EVDP+G RTIG++TK DL+D+GT+ +  D+  N +   ++GY+ V  R Q
Sbjct: 182  ANSDALKLAKEVDPQGLRTIGVITKLDLMDEGTDAR--DILENKLLPLRRGYIGVVNRSQ 239

Query: 1023 QDIQDQLSLAKALQKEQAFFENHAHFRDLLEEGRATIPCLAERLTSELIMHICKTLPLLE 1202
            +DI+ +  +  AL  E+ FF +H  +R + +  R   P L + L  +L  HI ++LP L 
Sbjct: 240  KDIEGKKDIRAALAAERKFFLSHPAYRHMAD--RMGTPHLQKTLNQQLTNHIRESLPALR 297

Query: 1203 NQIKESHQKITEELQKYGSDIPEDESGKMFFLIDKIDAFNSDITALIQG-----EELVVE 1367
            ++++     + +E+++Y +  P+D + K   L+  +  F  D    I+G     + L + 
Sbjct: 298  SKLQSQLLSLEKEVEEYKNFRPDDPTRKTKALLQMVQQFGVDFEKRIEGSGDQVDTLELS 357

Query: 1368 YECRLFTKMRNEFCKWSAVVEKNFKNGYDAICKQIQLFENQYRGRELPGFVNYKTFETII 1547
               R+       F      +E + K+    + ++I        G     F     FE I+
Sbjct: 358  GGARINRIFHERFPFELVKMEFDEKD----LRREISYAIKNIHGVRTGLFTPDMAFEAIV 413

Query: 1548 KKQVSVLEEPAVDMLHTVTDLVRLAFTDVSETNFNEFFNLHRTAKSKIEDIKLEQEKEAE 1727
            KKQ+  L+EP++  +  V   +       +E   N +  L    +  +     E+E   +
Sbjct: 414  KKQIVKLKEPSLKCVDLVVSELATVIKKCAE-KLNSYPRLREETERIVTTYIREREGRTK 472

Query: 1728 TSIRLHFQMEQ 1760
              I L   +EQ
Sbjct: 473  DQILLLIDIEQ 483


>ref|XP_868098.1| PREDICTED: similar to dynamin 2 isoform 4 isoform 42 [Canis
            familiaris].
          Length = 868

 Score =  235 bits (599), Expect = 2e-61
 Identities = 163/491 (33%), Positives = 260/491 (52%), Gaps = 7/491 (1%)
 Frame = +3

Query: 309  EKVRPCID-LIDSLRALGVEQDLALPAIAVIGDQSSGKSSVLEALSGVA-LPRGSGIVTR 482
            E++ P ++ L D+  ++G    L LP IAV+G QS+GKSSVLE   G   LPRGSGIVTR
Sbjct: 7    EELIPLVNKLQDAFSSIGQSCHLDLPQIAVVGGQSAGKSSVLENFVGRDFLPRGSGIVTR 66

Query: 483  CPXXXXXXXXXNEEDEWKGKVSYRDSEIELSDASQVEKEVSAAQIAIAGEGVGISHELIS 662
             P          E  E+    S +      +D  +V +E+ A    + G   GIS   I+
Sbjct: 67   RPLILQLIFSKTEYAEFLHCKSKK-----FTDFDEVRQEIEAETDRVTGTNKGISPVPIN 121

Query: 663  LEVSSPHVPDLTLIDLPGITRVAVGNQPYDIEYQIKSLIKKYICKQETINLVVVPCNVDI 842
            L V SPHV +LTLIDLPGIT+V VG+QP DIEYQIK +I ++I ++ ++ L V P N+D+
Sbjct: 122  LRVYSPHVLNLTLIDLPGITKVPVGDQPPDIEYQIKDMILQFISRESSLILAVTPANMDL 181

Query: 843  ATTEALRMAQEVDPEGDRTIGILTKPDLVDKGTEDKIVDVARNLVFHPKKGYMIVKCRGQ 1022
            A ++AL++A+EVDP+G RTIG++TK DL+D+GT+ +  D+  N +   ++GY+ V  R Q
Sbjct: 182  ANSDALKLAKEVDPQGLRTIGVITKLDLMDEGTDAR--DILENKLLPLRRGYIGVVNRSQ 239

Query: 1023 QDIQDQLSLAKALQKEQAFFENHAHFRDLLEEGRATIPCLAERLTSELIMHICKTLPLLE 1202
            +DI+ +  +  AL  E+ FF +H  +R + +  R   P L + L  +L  HI ++LP L 
Sbjct: 240  KDIEGKKDIRAALAAERKFFLSHPAYRHMAD--RMGTPHLQKTLNQQLTNHIRESLPALR 297

Query: 1203 NQIKESHQKITEELQKYGSDIPEDESGKMFFLIDKIDAFNSDITALIQG-----EELVVE 1367
            ++++     + +E+++Y +  P+D + K   L+  +  F  D    I+G     + L + 
Sbjct: 298  SKLQSQLLSLEKEVEEYKNFRPDDPTRKTKALLQMVQQFGVDFEKRIEGSGDQVDTLELS 357

Query: 1368 YECRLFTKMRNEFCKWSAVVEKNFKNGYDAICKQIQLFENQYRGRELPGFVNYKTFETII 1547
               R+       F      +E + K+    + ++I        G     F     FE I+
Sbjct: 358  GGARINRIFHERFPFELVKMEFDEKD----LRREISYAIKNIHGVRTGLFTPDMAFEAIV 413

Query: 1548 KKQVSVLEEPAVDMLHTVTDLVRLAFTDVSETNFNEFFNLHRTAKSKIEDIKLEQEKEAE 1727
            KKQ+  L+EP++  +  V   +       +E   N +  L    +  +     E+E   +
Sbjct: 414  KKQIVKLKEPSLKCVDLVVSELATVIKKCAE-KLNSYPRLREETERIVTTYIREREGRTK 472

Query: 1728 TSIRLHFQMEQ 1760
              I L   +EQ
Sbjct: 473  DQILLLIDIEQ 483


>ref|XP_867921.1| PREDICTED: similar to dynamin 2 isoform 2 isoform 6 [Canis
            familiaris].
          Length = 876

 Score =  235 bits (599), Expect = 2e-61
 Identities = 163/491 (33%), Positives = 260/491 (52%), Gaps = 7/491 (1%)
 Frame = +3

Query: 309  EKVRPCID-LIDSLRALGVEQDLALPAIAVIGDQSSGKSSVLEALSGVA-LPRGSGIVTR 482
            E++ P ++ L D+  ++G    L LP IAV+G QS+GKSSVLE   G   LPRGSGIVTR
Sbjct: 7    EELIPLVNKLQDAFSSIGQSCHLDLPQIAVVGGQSAGKSSVLENFVGRDFLPRGSGIVTR 66

Query: 483  CPXXXXXXXXXNEEDEWKGKVSYRDSEIELSDASQVEKEVSAAQIAIAGEGVGISHELIS 662
             P          E  E+    S +      +D  +V +E+ A    + G   GIS   I+
Sbjct: 67   RPLILQLIFSKTEYAEFLHCKSKK-----FTDFDEVRQEIEAETDRVTGTNKGISPVPIN 121

Query: 663  LEVSSPHVPDLTLIDLPGITRVAVGNQPYDIEYQIKSLIKKYICKQETINLVVVPCNVDI 842
            L V SPHV +LTLIDLPGIT+V VG+QP DIEYQIK +I ++I ++ ++ L V P N+D+
Sbjct: 122  LRVYSPHVLNLTLIDLPGITKVPVGDQPPDIEYQIKDMILQFISRESSLILAVTPANMDL 181

Query: 843  ATTEALRMAQEVDPEGDRTIGILTKPDLVDKGTEDKIVDVARNLVFHPKKGYMIVKCRGQ 1022
            A ++AL++A+EVDP+G RTIG++TK DL+D+GT+ +  D+  N +   ++GY+ V  R Q
Sbjct: 182  ANSDALKLAKEVDPQGLRTIGVITKLDLMDEGTDAR--DILENKLLPLRRGYIGVVNRSQ 239

Query: 1023 QDIQDQLSLAKALQKEQAFFENHAHFRDLLEEGRATIPCLAERLTSELIMHICKTLPLLE 1202
            +DI+ +  +  AL  E+ FF +H  +R + +  R   P L + L  +L  HI ++LP L 
Sbjct: 240  KDIEGKKDIRAALAAERKFFLSHPAYRHMAD--RMGTPHLQKTLNQQLTNHIRESLPALR 297

Query: 1203 NQIKESHQKITEELQKYGSDIPEDESGKMFFLIDKIDAFNSDITALIQG-----EELVVE 1367
            ++++     + +E+++Y +  P+D + K   L+  +  F  D    I+G     + L + 
Sbjct: 298  SKLQSQLLSLEKEVEEYKNFRPDDPTRKTKALLQMVQQFGVDFEKRIEGSGDQVDTLELS 357

Query: 1368 YECRLFTKMRNEFCKWSAVVEKNFKNGYDAICKQIQLFENQYRGRELPGFVNYKTFETII 1547
               R+       F      +E + K+    + ++I        G     F     FE I+
Sbjct: 358  GGARINRIFHERFPFELVKMEFDEKD----LRREISYAIKNIHGVRTGLFTPDMAFEAIV 413

Query: 1548 KKQVSVLEEPAVDMLHTVTDLVRLAFTDVSETNFNEFFNLHRTAKSKIEDIKLEQEKEAE 1727
            KKQ+  L+EP++  +  V   +       +E   N +  L    +  +     E+E   +
Sbjct: 414  KKQIVKLKEPSLKCVDLVVSELATVIKKCAE-KLNSYPRLREETERIVTTYIREREGRTK 472

Query: 1728 TSIRLHFQMEQ 1760
              I L   +EQ
Sbjct: 473  DQILLLIDIEQ 483


>ref|XP_868023.1| PREDICTED: similar to dynamin 2 isoform 2 isoform 26 [Canis
            familiaris].
          Length = 894

 Score =  233 bits (595), Expect = 5e-61
 Identities = 166/508 (32%), Positives = 262/508 (51%), Gaps = 24/508 (4%)
 Frame = +3

Query: 309  EKVRPCID-LIDSLRALGVEQDLALPAIAVIGDQSSGKSSVLEALSGVA-LPRGSGIVTR 482
            E++ P ++ L D+  ++G    L LP IAV+G QS+GKSSVLE   G   LPRGSGIVTR
Sbjct: 7    EELIPLVNKLQDAFSSIGQSCHLDLPQIAVVGGQSAGKSSVLENFVGRDFLPRGSGIVTR 66

Query: 483  CPXXXXXXXXXNEEDE---WKGKVSYRDSEIE--------------LSDASQVEKEVSAA 611
             P          E  E     G V  +  E E               +D  +V +E+ A 
Sbjct: 67   RPLILQLIFSKTEPKERPGGSGAVHCKGPEAEDLKYAEFLHCKSKKFTDFDEVRQEIEAE 126

Query: 612  QIAIAGEGVGISHELISLEVSSPHVPDLTLIDLPGITRVAVGNQPYDIEYQIKSLIKKYI 791
               + G   GIS   I+L V SPHV +LTLIDLPGIT+V VG+QP DIEYQIK +I ++I
Sbjct: 127  TDRVTGTNKGISPVPINLRVYSPHVLNLTLIDLPGITKVPVGDQPPDIEYQIKDMILQFI 186

Query: 792  CKQETINLVVVPCNVDIATTEALRMAQEVDPEGDRTIGILTKPDLVDKGTEDKIVDVARN 971
             ++ ++ L V P N+D+A ++AL++A+EVDP+G RTIG++TK DL+D+GT+ +  D+  N
Sbjct: 187  SRESSLILAVTPANMDLANSDALKLAKEVDPQGLRTIGVITKLDLMDEGTDAR--DILEN 244

Query: 972  LVFHPKKGYMIVKCRGQQDIQDQLSLAKALQKEQAFFENHAHFRDLLEEGRATIPCLAER 1151
             +   ++GY+ V  R Q+DI+ +  +  AL  E+ FF +H  +R + +  R   P L + 
Sbjct: 245  KLLPLRRGYIGVVNRSQKDIEGKKDIRAALAAERKFFLSHPAYRHMAD--RMGTPHLQKT 302

Query: 1152 LTSELIMHICKTLPLLENQIKESHQKITEELQKYGSDIPEDESGKMFFLIDKIDAFNSDI 1331
            L  +L  HI ++LP L ++++     + +E+++Y +  P+D + K   L+  +  F  D 
Sbjct: 303  LNQQLTNHIRESLPALRSKLQSQLLSLEKEVEEYKNFRPDDPTRKTKALLQMVQQFGVDF 362

Query: 1332 TALIQG-----EELVVEYECRLFTKMRNEFCKWSAVVEKNFKNGYDAICKQIQLFENQYR 1496
               I+G     + L +    R+       F      +E + K+    + ++I        
Sbjct: 363  EKRIEGSGDQVDTLELSGGARINRIFHERFPFELVKMEFDEKD----LRREISYAIKNIH 418

Query: 1497 GRELPGFVNYKTFETIIKKQVSVLEEPAVDMLHTVTDLVRLAFTDVSETNFNEFFNLHRT 1676
            G     F     FE I+KKQ+  L+EP++  +  V   +       +E   N +  L   
Sbjct: 419  GVRTGLFTPDMAFEAIVKKQIVKLKEPSLKCVDLVVSELATVIKKCAE-KLNSYPRLREE 477

Query: 1677 AKSKIEDIKLEQEKEAETSIRLHFQMEQ 1760
             +  +     E+E   +  I L   +EQ
Sbjct: 478  TERIVTTYIREREGRTKDQILLLIDIEQ 505


>ref|XP_868019.1| PREDICTED: similar to dynamin 2 isoform 2 isoform 25 [Canis
            familiaris].
          Length = 874

 Score =  233 bits (595), Expect = 5e-61
 Identities = 162/491 (32%), Positives = 261/491 (53%), Gaps = 7/491 (1%)
 Frame = +3

Query: 309  EKVRPCID-LIDSLRALGVEQDLALPAIAVIGDQSSGKSSVLEALSGVA-LPRGSGIVTR 482
            E++ P ++ L D+  ++G    L LP IAV+G QS+GKSSVLE   G   LPRGSGIVTR
Sbjct: 7    EELIPLVNKLQDAFSSIGQSCHLDLPQIAVVGGQSAGKSSVLENFVGRDFLPRGSGIVTR 66

Query: 483  CPXXXXXXXXXNEEDEWKGKVSYRDSEIELSDASQVEKEVSAAQIAIAGEGVGISHELIS 662
             P            DE+   +  +  +   +D  +V +E+ A    + G   GIS   I+
Sbjct: 67   RPLILQLIFSKTA-DEYAEFLHCKSKKF--TDFDEVRQEIEAETDRVTGTNKGISPVPIN 123

Query: 663  LEVSSPHVPDLTLIDLPGITRVAVGNQPYDIEYQIKSLIKKYICKQETINLVVVPCNVDI 842
            L V SPHV +LTLIDLPGIT+V VG+QP DIEYQIK +I ++I ++ ++ L V P N+D+
Sbjct: 124  LRVYSPHVLNLTLIDLPGITKVPVGDQPPDIEYQIKDMILQFISRESSLILAVTPANMDL 183

Query: 843  ATTEALRMAQEVDPEGDRTIGILTKPDLVDKGTEDKIVDVARNLVFHPKKGYMIVKCRGQ 1022
            A ++AL++A+EVDP+G RTIG++TK DL+D+GT+ +  D+  N +   ++GY+ V  R Q
Sbjct: 184  ANSDALKLAKEVDPQGLRTIGVITKLDLMDEGTDAR--DILENKLLPLRRGYIGVVNRSQ 241

Query: 1023 QDIQDQLSLAKALQKEQAFFENHAHFRDLLEEGRATIPCLAERLTSELIMHICKTLPLLE 1202
            +DI+ +  +  AL  E+ FF +H  +R + +  R   P L + L  +L  HI ++LP L 
Sbjct: 242  KDIEGKKDIRAALAAERKFFLSHPAYRHMAD--RMGTPHLQKTLNQQLTNHIRESLPALR 299

Query: 1203 NQIKESHQKITEELQKYGSDIPEDESGKMFFLIDKIDAFNSDITALIQG-----EELVVE 1367
            ++++     + +E+++Y +  P+D + K   L+  +  F  D    I+G     + L + 
Sbjct: 300  SKLQSQLLSLEKEVEEYKNFRPDDPTRKTKALLQMVQQFGVDFEKRIEGSGDQVDTLELS 359

Query: 1368 YECRLFTKMRNEFCKWSAVVEKNFKNGYDAICKQIQLFENQYRGRELPGFVNYKTFETII 1547
               R+       F      +E + K+    + ++I        G     F     FE I+
Sbjct: 360  GGARINRIFHERFPFELVKMEFDEKD----LRREISYAIKNIHGVRTGLFTPDMAFEAIV 415

Query: 1548 KKQVSVLEEPAVDMLHTVTDLVRLAFTDVSETNFNEFFNLHRTAKSKIEDIKLEQEKEAE 1727
            KKQ+  L+EP++  +  V   +       +E   N +  L    +  +     E+E   +
Sbjct: 416  KKQIVKLKEPSLKCVDLVVSELATVIKKCAE-KLNSYPRLREETERIVTTYIREREGRTK 474

Query: 1728 TSIRLHFQMEQ 1760
              I L   +EQ
Sbjct: 475  DQILLLIDIEQ 485


>ref|NP_001124521.1| dynamin-1 [Canis lupus familiaris].
          Length = 864

 Score =  233 bits (593), Expect = 9e-61
 Identities = 156/428 (36%), Positives = 232/428 (54%), Gaps = 8/428 (1%)
 Frame = +3

Query: 333  LIDSLRALGVEQDLALPAIAVIGDQSSGKSSVLEALSGVA-LPRGSGIVTRCPXXXXXXX 509
            L D+  A+G   DL LP IAV+G QS+GKSSVLE   G   LPRGSGIVTR P       
Sbjct: 16   LQDAFSAIGQNADLDLPQIAVVGGQSAGKSSVLENFVGRDFLPRGSGIVTRRPLVLQLVN 75

Query: 510  XXNEEDEW---KGKVSYRDSEIELSDASQVEKEVSAAQIAIAGEGVGISHELISLEVSSP 680
               E  E+   KGK        + +D  +V  E+ A    + G   GIS   I+L V SP
Sbjct: 76   ATTEYAEFLHCKGK--------KFTDFEEVRLEIEAETDRVTGTNKGISPVPINLRVYSP 127

Query: 681  HVPDLTLIDLPGITRVAVGNQPYDIEYQIKSLIKKYICKQETINLVVVPCNVDIATTEAL 860
             V +LTL+DLPG+T+V VG+QP DIE+QI+ ++ +++ K+  + L V P N D+A ++AL
Sbjct: 128  QVLNLTLVDLPGMTKVPVGDQPPDIEFQIRDMLMQFVTKENCLILAVSPANSDLANSDAL 187

Query: 861  RMAQEVDPEGDRTIGILTKPDLVDKGTEDKIVDVARNLVFHPKKGYMIVKCRGQQDIQDQ 1040
            ++A+EVDP+G RTIG++TK DL+D+GT+ +  DV  N +   ++GY+ V  R Q+DI  +
Sbjct: 188  KVAKEVDPQGQRTIGVITKLDLMDEGTDAR--DVLENKLLPLRRGYIGVVNRSQKDIDGK 245

Query: 1041 LSLAKALQKEQAFFENHAHFRDLLEEGRATIPCLAERLTSELIMHICKTLPLLENQIKES 1220
              ++ AL  E  FF +H  +R L +  R   P L + L  +L  HI  TLP L N+++  
Sbjct: 246  KDISAALAAEXKFFLSHPSYRHLAD--RMGTPYLQKVLNQQLTNHIRDTLPGLRNRLQSQ 303

Query: 1221 HQKITEELQKYGSDIPEDESGKMFFLIDKIDAFNSDITALIQGE-ELVVEYECRLFTKMR 1397
               I +E+++Y +  P+D + K   L+  +  F  D    I+G  + +  YE     ++ 
Sbjct: 304  LLSIEKEVEEYKNFRPDDPARKTKALLQMVQQFAVDFEKRIEGSGDQIDTYELSGGARIN 363

Query: 1398 NEFCKWSAVVEKNFKNGYDAICKQIQLFENQYRGRELPGFVNYKTFETIIKKQVSVLEEP 1577
              F +         +     + ++I        G     F     FETI+KKQV  + EP
Sbjct: 364  RIFHERFPFELVKMEFDEKELRREISYAIKNIHGIRTGLFTPDMAFETIVKKQVKKIREP 423

Query: 1578 ---AVDML 1592
                VDM+
Sbjct: 424  CLKCVDMV 431


  Database: RefSeq49_CP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,874,504
  Number of sequences in database:  33,336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 85,664,304
Number of extensions: 2039022
Number of successful extensions: 7824
Number of sequences better than 1.0e-05: 60
Number of HSP's gapped: 7594
Number of HSP's successfully gapped: 71
Length of query: 828
Length of database: 18,874,504
Length adjustment: 111
Effective length of query: 717
Effective length of database: 15,174,208
Effective search space: 10879907136
Effective search space used: 10879907136
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

Search to RefSeqHP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-000493
         (2486 letters)

Database: RefSeq49_HP.fasta 
           32,964 sequences; 18,297,164 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001171517.1| interferon-induced GTP-binding protein Mx1 [...   932   0.0  
Alignment   gi|NP_001138397.1| interferon-induced GTP-binding protein Mx1 [...   932   0.0  
Alignment   gi|NP_002453.2| interferon-induced GTP-binding protein Mx1 [Hom...   932   0.0  
Alignment   gi|NP_002454.1| interferon-induced GTP-binding protein Mx2 [Hom...   707   0.0  
Alignment   gi|NP_001005336.1| dynamin-1 isoform 2 [Homo sapiens].               236   7e-62
Alignment   gi|NP_004399.2| dynamin-1 isoform 1 [Homo sapiens].                  236   7e-62
Alignment   gi|NP_001005361.1| dynamin-2 isoform 2 [Homo sapiens].               234   3e-61
Alignment   gi|NP_001005362.1| dynamin-2 isoform 4 [Homo sapiens].               234   3e-61
Alignment   gi|NP_001005360.1| dynamin-2 isoform 1 [Homo sapiens].               233   8e-61
Alignment   gi|NP_004936.2| dynamin-2 isoform 3 [Homo sapiens].                  233   8e-61

>ref|NP_001171517.1| interferon-induced GTP-binding protein Mx1 [Homo sapiens].
          Length = 662

 Score =  932 bits (2408), Expect = 0.0
 Identities = 477/656 (72%), Positives = 544/656 (82%)
 Frame = +3

Query: 171  MVYSNCESKEPDSVSASNHLLLNGNDELVEKSHKTGPENNLYSQYEEKVRPCIDLIDSLR 350
            MV S  +  + D  +AS+ LLLNG+  + +K+  +  ENNL SQYEEKVRPCIDLIDSLR
Sbjct: 1    MVVSEVDIAKADPAAASHPLLLNGDATVAQKNPGSVAENNLCSQYEEKVRPCIDLIDSLR 60

Query: 351  ALGVEQDLALPAIAVIGDQSSGKSSVLEALSGVALPRGSGIVTRCPXXXXXXXXXNEEDE 530
            ALGVEQDLALPAIAVIGDQSSGKSSVLEALSGVALPRGSGIVTRCP         NE D+
Sbjct: 61   ALGVEQDLALPAIAVIGDQSSGKSSVLEALSGVALPRGSGIVTRCPLVLKLKKLVNE-DK 119

Query: 531  WKGKVSYRDSEIELSDASQVEKEVSAAQIAIAGEGVGISHELISLEVSSPHVPDLTLIDL 710
            W+GKVSY+D EIE+SDAS+VEKE++ AQ AIAGEG+GISHELI+LE+SS  VPDLTLIDL
Sbjct: 120  WRGKVSYQDYEIEISDASEVEKEINKAQNAIAGEGMGISHELITLEISSRDVPDLTLIDL 179

Query: 711  PGITRVAVGNQPYDIEYQIKSLIKKYICKQETINLVVVPCNVDIATTEALRMAQEVDPEG 890
            PGITRVAVGNQP DI Y+IK+LIKKYI +QETI+LVVVP NVDIATTEAL MAQEVDPEG
Sbjct: 180  PGITRVAVGNQPADIGYKIKTLIKKYIQRQETISLVVVPSNVDIATTEALSMAQEVDPEG 239

Query: 891  DRTIGILTKPDLVDKGTEDKIVDVARNLVFHPKKGYMIVKCRGQQDIQDQLSLAKALQKE 1070
            DRTIGILTKPDLVDKGTEDK+VDV RNLVFH KKGYMIVKCRGQQ+IQDQLSL++ALQ+E
Sbjct: 240  DRTIGILTKPDLVDKGTEDKVVDVVRNLVFHLKKGYMIVKCRGQQEIQDQLSLSEALQRE 299

Query: 1071 QAFFENHAHFRDLLEEGRATIPCLAERLTSELIMHICKTLPLLENQIKESHQKITEELQK 1250
            + FFENH +FRDLLEEG+AT+PCLAE+LTSELI HICK+LPLLENQIKE+HQ+ITEELQK
Sbjct: 300  KIFFENHPYFRDLLEEGKATVPCLAEKLTSELITHICKSLPLLENQIKETHQRITEELQK 359

Query: 1251 YGSDIPEDESGKMFFLIDKIDAFNSDITALIQGEELVVEYECRLFTKMRNEFCKWSAVVE 1430
            YG DIPEDE+ KMFFLIDK++AFN DITAL+QGEE V E + RLFT++R+EF KWS ++E
Sbjct: 360  YGVDIPEDENEKMFFLIDKVNAFNQDITALMQGEETVGEEDIRLFTRLRHEFHKWSTIIE 419

Query: 1431 KNFKNGYDAICKQIQLFENQYRGRELPGFVNYKTFETIIKKQVSVLEEPAVDMLHTVTDL 1610
             NF+ G+  + ++IQ FENQYRGRELPGFVNY+TFETI+K+Q+  LEEPAVDMLHTVTD+
Sbjct: 420  NNFQEGHKILSRKIQKFENQYRGRELPGFVNYRTFETIVKQQIKALEEPAVDMLHTVTDM 479

Query: 1611 VRLAFTDVSETNFNEFFNLHRTAKSKIEDIKLEQEKEAETSIRLHFQMEQIVYCQDQVYR 1790
            VRLAFTDVS  NF EFFNLHRTAKSKIEDI+ EQE+E E  IRLHFQMEQIVYCQDQVYR
Sbjct: 480  VRLAFTDVSIKNFEEFFNLHRTAKSKIEDIRAEQEREGEKLIRLHFQMEQIVYCQDQVYR 539

Query: 1791 GALQXXXXXXXXXXXXXXSNQYFLXXXXXXXXXXIAEIFQHLIAYHQEVGKRISSHIPLI 1970
            GALQ              S  +            + EIFQHL+AYHQE  KRISSHIPLI
Sbjct: 540  GALQKVREKELEEEKKKKSWDFGAFQSSSATDSSMEEIFQHLMAYHQEASKRISSHIPLI 599

Query: 1971 IQFFILRTFGXXXXXXXXXXXXNKDQYDWLLRERSDTSDKRKFLKERLMRLTQARQ 2138
            IQFF+L+T+G            +KD Y WLL+ERSDTSDKRKFLKERL RLTQAR+
Sbjct: 600  IQFFMLQTYGQQLQKAMLQLLQDKDTYSWLLKERSDTSDKRKFLKERLARLTQARR 655


>ref|NP_001138397.1| interferon-induced GTP-binding protein Mx1 [Homo sapiens].
          Length = 662

 Score =  932 bits (2408), Expect = 0.0
 Identities = 477/656 (72%), Positives = 544/656 (82%)
 Frame = +3

Query: 171  MVYSNCESKEPDSVSASNHLLLNGNDELVEKSHKTGPENNLYSQYEEKVRPCIDLIDSLR 350
            MV S  +  + D  +AS+ LLLNG+  + +K+  +  ENNL SQYEEKVRPCIDLIDSLR
Sbjct: 1    MVVSEVDIAKADPAAASHPLLLNGDATVAQKNPGSVAENNLCSQYEEKVRPCIDLIDSLR 60

Query: 351  ALGVEQDLALPAIAVIGDQSSGKSSVLEALSGVALPRGSGIVTRCPXXXXXXXXXNEEDE 530
            ALGVEQDLALPAIAVIGDQSSGKSSVLEALSGVALPRGSGIVTRCP         NE D+
Sbjct: 61   ALGVEQDLALPAIAVIGDQSSGKSSVLEALSGVALPRGSGIVTRCPLVLKLKKLVNE-DK 119

Query: 531  WKGKVSYRDSEIELSDASQVEKEVSAAQIAIAGEGVGISHELISLEVSSPHVPDLTLIDL 710
            W+GKVSY+D EIE+SDAS+VEKE++ AQ AIAGEG+GISHELI+LE+SS  VPDLTLIDL
Sbjct: 120  WRGKVSYQDYEIEISDASEVEKEINKAQNAIAGEGMGISHELITLEISSRDVPDLTLIDL 179

Query: 711  PGITRVAVGNQPYDIEYQIKSLIKKYICKQETINLVVVPCNVDIATTEALRMAQEVDPEG 890
            PGITRVAVGNQP DI Y+IK+LIKKYI +QETI+LVVVP NVDIATTEAL MAQEVDPEG
Sbjct: 180  PGITRVAVGNQPADIGYKIKTLIKKYIQRQETISLVVVPSNVDIATTEALSMAQEVDPEG 239

Query: 891  DRTIGILTKPDLVDKGTEDKIVDVARNLVFHPKKGYMIVKCRGQQDIQDQLSLAKALQKE 1070
            DRTIGILTKPDLVDKGTEDK+VDV RNLVFH KKGYMIVKCRGQQ+IQDQLSL++ALQ+E
Sbjct: 240  DRTIGILTKPDLVDKGTEDKVVDVVRNLVFHLKKGYMIVKCRGQQEIQDQLSLSEALQRE 299

Query: 1071 QAFFENHAHFRDLLEEGRATIPCLAERLTSELIMHICKTLPLLENQIKESHQKITEELQK 1250
            + FFENH +FRDLLEEG+AT+PCLAE+LTSELI HICK+LPLLENQIKE+HQ+ITEELQK
Sbjct: 300  KIFFENHPYFRDLLEEGKATVPCLAEKLTSELITHICKSLPLLENQIKETHQRITEELQK 359

Query: 1251 YGSDIPEDESGKMFFLIDKIDAFNSDITALIQGEELVVEYECRLFTKMRNEFCKWSAVVE 1430
            YG DIPEDE+ KMFFLIDK++AFN DITAL+QGEE V E + RLFT++R+EF KWS ++E
Sbjct: 360  YGVDIPEDENEKMFFLIDKVNAFNQDITALMQGEETVGEEDIRLFTRLRHEFHKWSTIIE 419

Query: 1431 KNFKNGYDAICKQIQLFENQYRGRELPGFVNYKTFETIIKKQVSVLEEPAVDMLHTVTDL 1610
             NF+ G+  + ++IQ FENQYRGRELPGFVNY+TFETI+K+Q+  LEEPAVDMLHTVTD+
Sbjct: 420  NNFQEGHKILSRKIQKFENQYRGRELPGFVNYRTFETIVKQQIKALEEPAVDMLHTVTDM 479

Query: 1611 VRLAFTDVSETNFNEFFNLHRTAKSKIEDIKLEQEKEAETSIRLHFQMEQIVYCQDQVYR 1790
            VRLAFTDVS  NF EFFNLHRTAKSKIEDI+ EQE+E E  IRLHFQMEQIVYCQDQVYR
Sbjct: 480  VRLAFTDVSIKNFEEFFNLHRTAKSKIEDIRAEQEREGEKLIRLHFQMEQIVYCQDQVYR 539

Query: 1791 GALQXXXXXXXXXXXXXXSNQYFLXXXXXXXXXXIAEIFQHLIAYHQEVGKRISSHIPLI 1970
            GALQ              S  +            + EIFQHL+AYHQE  KRISSHIPLI
Sbjct: 540  GALQKVREKELEEEKKKKSWDFGAFQSSSATDSSMEEIFQHLMAYHQEASKRISSHIPLI 599

Query: 1971 IQFFILRTFGXXXXXXXXXXXXNKDQYDWLLRERSDTSDKRKFLKERLMRLTQARQ 2138
            IQFF+L+T+G            +KD Y WLL+ERSDTSDKRKFLKERL RLTQAR+
Sbjct: 600  IQFFMLQTYGQQLQKAMLQLLQDKDTYSWLLKERSDTSDKRKFLKERLARLTQARR 655


>ref|NP_002453.2| interferon-induced GTP-binding protein Mx1 [Homo sapiens].
          Length = 662

 Score =  932 bits (2408), Expect = 0.0
 Identities = 477/656 (72%), Positives = 544/656 (82%)
 Frame = +3

Query: 171  MVYSNCESKEPDSVSASNHLLLNGNDELVEKSHKTGPENNLYSQYEEKVRPCIDLIDSLR 350
            MV S  +  + D  +AS+ LLLNG+  + +K+  +  ENNL SQYEEKVRPCIDLIDSLR
Sbjct: 1    MVVSEVDIAKADPAAASHPLLLNGDATVAQKNPGSVAENNLCSQYEEKVRPCIDLIDSLR 60

Query: 351  ALGVEQDLALPAIAVIGDQSSGKSSVLEALSGVALPRGSGIVTRCPXXXXXXXXXNEEDE 530
            ALGVEQDLALPAIAVIGDQSSGKSSVLEALSGVALPRGSGIVTRCP         NE D+
Sbjct: 61   ALGVEQDLALPAIAVIGDQSSGKSSVLEALSGVALPRGSGIVTRCPLVLKLKKLVNE-DK 119

Query: 531  WKGKVSYRDSEIELSDASQVEKEVSAAQIAIAGEGVGISHELISLEVSSPHVPDLTLIDL 710
            W+GKVSY+D EIE+SDAS+VEKE++ AQ AIAGEG+GISHELI+LE+SS  VPDLTLIDL
Sbjct: 120  WRGKVSYQDYEIEISDASEVEKEINKAQNAIAGEGMGISHELITLEISSRDVPDLTLIDL 179

Query: 711  PGITRVAVGNQPYDIEYQIKSLIKKYICKQETINLVVVPCNVDIATTEALRMAQEVDPEG 890
            PGITRVAVGNQP DI Y+IK+LIKKYI +QETI+LVVVP NVDIATTEAL MAQEVDPEG
Sbjct: 180  PGITRVAVGNQPADIGYKIKTLIKKYIQRQETISLVVVPSNVDIATTEALSMAQEVDPEG 239

Query: 891  DRTIGILTKPDLVDKGTEDKIVDVARNLVFHPKKGYMIVKCRGQQDIQDQLSLAKALQKE 1070
            DRTIGILTKPDLVDKGTEDK+VDV RNLVFH KKGYMIVKCRGQQ+IQDQLSL++ALQ+E
Sbjct: 240  DRTIGILTKPDLVDKGTEDKVVDVVRNLVFHLKKGYMIVKCRGQQEIQDQLSLSEALQRE 299

Query: 1071 QAFFENHAHFRDLLEEGRATIPCLAERLTSELIMHICKTLPLLENQIKESHQKITEELQK 1250
            + FFENH +FRDLLEEG+AT+PCLAE+LTSELI HICK+LPLLENQIKE+HQ+ITEELQK
Sbjct: 300  KIFFENHPYFRDLLEEGKATVPCLAEKLTSELITHICKSLPLLENQIKETHQRITEELQK 359

Query: 1251 YGSDIPEDESGKMFFLIDKIDAFNSDITALIQGEELVVEYECRLFTKMRNEFCKWSAVVE 1430
            YG DIPEDE+ KMFFLIDK++AFN DITAL+QGEE V E + RLFT++R+EF KWS ++E
Sbjct: 360  YGVDIPEDENEKMFFLIDKVNAFNQDITALMQGEETVGEEDIRLFTRLRHEFHKWSTIIE 419

Query: 1431 KNFKNGYDAICKQIQLFENQYRGRELPGFVNYKTFETIIKKQVSVLEEPAVDMLHTVTDL 1610
             NF+ G+  + ++IQ FENQYRGRELPGFVNY+TFETI+K+Q+  LEEPAVDMLHTVTD+
Sbjct: 420  NNFQEGHKILSRKIQKFENQYRGRELPGFVNYRTFETIVKQQIKALEEPAVDMLHTVTDM 479

Query: 1611 VRLAFTDVSETNFNEFFNLHRTAKSKIEDIKLEQEKEAETSIRLHFQMEQIVYCQDQVYR 1790
            VRLAFTDVS  NF EFFNLHRTAKSKIEDI+ EQE+E E  IRLHFQMEQIVYCQDQVYR
Sbjct: 480  VRLAFTDVSIKNFEEFFNLHRTAKSKIEDIRAEQEREGEKLIRLHFQMEQIVYCQDQVYR 539

Query: 1791 GALQXXXXXXXXXXXXXXSNQYFLXXXXXXXXXXIAEIFQHLIAYHQEVGKRISSHIPLI 1970
            GALQ              S  +            + EIFQHL+AYHQE  KRISSHIPLI
Sbjct: 540  GALQKVREKELEEEKKKKSWDFGAFQSSSATDSSMEEIFQHLMAYHQEASKRISSHIPLI 599

Query: 1971 IQFFILRTFGXXXXXXXXXXXXNKDQYDWLLRERSDTSDKRKFLKERLMRLTQARQ 2138
            IQFF+L+T+G            +KD Y WLL+ERSDTSDKRKFLKERL RLTQAR+
Sbjct: 600  IQFFMLQTYGQQLQKAMLQLLQDKDTYSWLLKERSDTSDKRKFLKERLARLTQARR 655


>ref|NP_002454.1| interferon-induced GTP-binding protein Mx2 [Homo sapiens].
          Length = 715

 Score =  707 bits (1824), Expect = 0.0
 Identities = 373/642 (58%), Positives = 463/642 (72%), Gaps = 4/642 (0%)
 Frame = +3

Query: 222  NHLLLNGNDELVEKSHKT--GPENNLYSQYEEKVRPCIDLIDSLRALGVEQDLALPAIAV 395
            N L LN       +S     GPENNLYSQYE+KVRPCIDLIDSLRALGVEQDLALPAIAV
Sbjct: 64   NFLTLNNQPPPGNRSQPRAMGPENNLYSQYEQKVRPCIDLIDSLRALGVEQDLALPAIAV 123

Query: 396  IGDQSSGKSSVLEALSGVALPRGSGIVTRCPXXXXXXXXXNEEDEWKGKVSYRDSEIELS 575
            IGDQSSGKSSVLEALSGVALPRGSGIVTRCP          E   W G++SYR++E+EL 
Sbjct: 124  IGDQSSGKSSVLEALSGVALPRGSGIVTRCPLVLKLKKQPCEA--WAGRISYRNTELELQ 181

Query: 576  DASQVEKEVSAAQIAIAGEGVGISHELISLEVSSPHVPDLTLIDLPGITRVAVGNQPYDI 755
            D  QVEKE+  AQ  +AG G GISHELISLE++SP VPDLT+IDLPGITRVAV NQP DI
Sbjct: 182  DPGQVEKEIHKAQNVMAGNGRGISHELISLEITSPEVPDLTIIDLPGITRVAVDNQPRDI 241

Query: 756  EYQIKSLIKKYICKQETINLVVVPCNVDIATTEALRMAQEVDPEGDRTIGILTKPDLVDK 935
              QIK+LIKKYI +Q+TINLVVVPCNVDIATTEAL MA EVDPEGDRTIGILTKPDL+D+
Sbjct: 242  GLQIKALIKKYIQRQQTINLVVVPCNVDIATTEALSMAHEVDPEGDRTIGILTKPDLMDR 301

Query: 936  GTEDKIVDVARNLVFHPKKGYMIVKCRGQQDIQDQLSLAKALQKEQAFFENHAHFRDLLE 1115
            GTE  +++V RNL +  KKGYMIVKCRGQQ+I ++LSLA+A +KE  FF+ H +FR LLE
Sbjct: 302  GTEKSVMNVVRNLTYPLKKGYMIVKCRGQQEITNRLSLAEATKKEITFFQTHPYFRVLLE 361

Query: 1116 EGRATIPCLAERLTSELIMHICKTLPLLENQIKESHQKITEELQKYGSDIPEDESGKMFF 1295
            EG AT+P LAERLT+ELIMHI K+LPLLE QI+ESHQK TEEL++ G+DIP  E+ KMFF
Sbjct: 362  EGSATVPRLAERLTTELIMHIQKSLPLLEGQIRESHQKATEELRRCGADIPSQEADKMFF 421

Query: 1296 LIDKIDAFNSDITALIQGEELVVEYECRLFTKMRNEFCKWSAVVEKNFKNGYDAICKQIQ 1475
            LI+KI  FN DI  L++GEE+V E E RL+ K+R +F  W  ++  N +   + I ++++
Sbjct: 422  LIEKIKMFNQDIEKLVEGEEVVRENETRLYNKIREDFKNWVGILATNTQKVKNIIHEEVE 481

Query: 1476 LFENQYRGRELPGFVNYKTFETIIKKQVSVLEEPAVDMLHTVTDLVRLAFTDVSETNFNE 1655
             +E QYRG+EL GFVNYKTFE I+ + +  L EPA+ ML    ++++ AF +V++ +F E
Sbjct: 482  KYEKQYRGKELLGFVNYKTFEIIVHQYIQQLVEPALSMLQKAMEIIQQAFINVAKKHFGE 541

Query: 1656 FFNLHRTAKSKIEDIKLEQEKEAETSIRLHFQMEQIVYCQDQVYRGALQXXXXXXXXXXX 1835
            FFNL++T +S IEDIK++   +AE  I+L F+MEQ+V+CQDQ+Y   L+           
Sbjct: 542  FFNLNQTVQSTIEDIKVKHTAKAENMIQLQFRMEQMVFCQDQIYSVVLKKVREEIFNPLG 601

Query: 1836 XXXSNQYF--LXXXXXXXXXXIAEIFQHLIAYHQEVGKRISSHIPLIIQFFILRTFGXXX 2009
                N                  EI  HL AY  E  KR+++ IP IIQ+F+LR  G   
Sbjct: 602  TPSQNMKLNSHFPSNESSVSSFTEIGIHLNAYFLETSKRLANQIPFIIQYFMLRENGDSL 661

Query: 2010 XXXXXXXXXNKDQYDWLLRERSDTSDKRKFLKERLMRLTQAR 2135
                      K++Y WLL+E+S+T+ KR+ LKER+ RLTQAR
Sbjct: 662  QKAMMQILQEKNRYSWLLQEQSETATKRRILKERIYRLTQAR 703


>ref|NP_001005336.1| dynamin-1 isoform 2 [Homo sapiens].
          Length = 851

 Score =  236 bits (602), Expect = 7e-62
 Identities = 157/428 (36%), Positives = 233/428 (54%), Gaps = 8/428 (1%)
 Frame = +3

Query: 333  LIDSLRALGVEQDLALPAIAVIGDQSSGKSSVLEALSGVA-LPRGSGIVTRCPXXXXXXX 509
            L D+  A+G   DL LP IAV+G QS+GKSSVLE   G   LPRGSGIVTR P       
Sbjct: 16   LQDAFSAIGQNADLDLPQIAVVGGQSAGKSSVLENFVGRDFLPRGSGIVTRRPLVLQLVN 75

Query: 510  XXNEEDEW---KGKVSYRDSEIELSDASQVEKEVSAAQIAIAGEGVGISHELISLEVSSP 680
               E  E+   KGK        + +D  +V  E+ A    + G   GIS   I+L V SP
Sbjct: 76   ATTEYAEFLHCKGK--------KFTDFEEVRLEIEAETDRVTGTNKGISPVPINLRVYSP 127

Query: 681  HVPDLTLIDLPGITRVAVGNQPYDIEYQIKSLIKKYICKQETINLVVVPCNVDIATTEAL 860
            HV +LTL+DLPG+T+V VG+QP DIE+QI+ ++ +++ K+  + L V P N D+A ++AL
Sbjct: 128  HVLNLTLVDLPGMTKVPVGDQPPDIEFQIRDMLMQFVTKENCLILAVSPANSDLANSDAL 187

Query: 861  RMAQEVDPEGDRTIGILTKPDLVDKGTEDKIVDVARNLVFHPKKGYMIVKCRGQQDIQDQ 1040
            ++A+EVDP+G RTIG++TK DL+D+GT+ +  DV  N +   ++GY+ V  R Q+DI  +
Sbjct: 188  KVAKEVDPQGQRTIGVITKLDLMDEGTDAR--DVLENKLLPLRRGYIGVVNRSQKDIDGK 245

Query: 1041 LSLAKALQKEQAFFENHAHFRDLLEEGRATIPCLAERLTSELIMHICKTLPLLENQIKES 1220
              +  AL  E+ FF +H  +R L +  R   P L + L  +L  HI  TLP L N+++  
Sbjct: 246  KDITAALAAERKFFLSHPSYRHLAD--RMGTPYLQKVLNQQLTNHIRDTLPGLRNKLQSQ 303

Query: 1221 HQKITEELQKYGSDIPEDESGKMFFLIDKIDAFNSDITALIQGE-ELVVEYECRLFTKMR 1397
               I +E+++Y +  P+D + K   L+  +  F  D    I+G  + +  YE     ++ 
Sbjct: 304  LLSIEKEVEEYKNFRPDDPARKTKALLQMVQQFAVDFEKRIEGSGDQIDTYELSGGARIN 363

Query: 1398 NEFCKWSAVVEKNFKNGYDAICKQIQLFENQYRGRELPGFVNYKTFETIIKKQVSVLEEP 1577
              F +         +     + ++I        G     F     FETI+KKQV  + EP
Sbjct: 364  RIFHERFPFELVKMEFDEKELRREISYAIKNIHGIRTGLFTPDMAFETIVKKQVKKIREP 423

Query: 1578 ---AVDML 1592
                VDM+
Sbjct: 424  CLKCVDMV 431


>ref|NP_004399.2| dynamin-1 isoform 1 [Homo sapiens].
          Length = 864

 Score =  236 bits (602), Expect = 7e-62
 Identities = 157/428 (36%), Positives = 233/428 (54%), Gaps = 8/428 (1%)
 Frame = +3

Query: 333  LIDSLRALGVEQDLALPAIAVIGDQSSGKSSVLEALSGVA-LPRGSGIVTRCPXXXXXXX 509
            L D+  A+G   DL LP IAV+G QS+GKSSVLE   G   LPRGSGIVTR P       
Sbjct: 16   LQDAFSAIGQNADLDLPQIAVVGGQSAGKSSVLENFVGRDFLPRGSGIVTRRPLVLQLVN 75

Query: 510  XXNEEDEW---KGKVSYRDSEIELSDASQVEKEVSAAQIAIAGEGVGISHELISLEVSSP 680
               E  E+   KGK        + +D  +V  E+ A    + G   GIS   I+L V SP
Sbjct: 76   ATTEYAEFLHCKGK--------KFTDFEEVRLEIEAETDRVTGTNKGISPVPINLRVYSP 127

Query: 681  HVPDLTLIDLPGITRVAVGNQPYDIEYQIKSLIKKYICKQETINLVVVPCNVDIATTEAL 860
            HV +LTL+DLPG+T+V VG+QP DIE+QI+ ++ +++ K+  + L V P N D+A ++AL
Sbjct: 128  HVLNLTLVDLPGMTKVPVGDQPPDIEFQIRDMLMQFVTKENCLILAVSPANSDLANSDAL 187

Query: 861  RMAQEVDPEGDRTIGILTKPDLVDKGTEDKIVDVARNLVFHPKKGYMIVKCRGQQDIQDQ 1040
            ++A+EVDP+G RTIG++TK DL+D+GT+ +  DV  N +   ++GY+ V  R Q+DI  +
Sbjct: 188  KVAKEVDPQGQRTIGVITKLDLMDEGTDAR--DVLENKLLPLRRGYIGVVNRSQKDIDGK 245

Query: 1041 LSLAKALQKEQAFFENHAHFRDLLEEGRATIPCLAERLTSELIMHICKTLPLLENQIKES 1220
              +  AL  E+ FF +H  +R L +  R   P L + L  +L  HI  TLP L N+++  
Sbjct: 246  KDITAALAAERKFFLSHPSYRHLAD--RMGTPYLQKVLNQQLTNHIRDTLPGLRNKLQSQ 303

Query: 1221 HQKITEELQKYGSDIPEDESGKMFFLIDKIDAFNSDITALIQGE-ELVVEYECRLFTKMR 1397
               I +E+++Y +  P+D + K   L+  +  F  D    I+G  + +  YE     ++ 
Sbjct: 304  LLSIEKEVEEYKNFRPDDPARKTKALLQMVQQFAVDFEKRIEGSGDQIDTYELSGGARIN 363

Query: 1398 NEFCKWSAVVEKNFKNGYDAICKQIQLFENQYRGRELPGFVNYKTFETIIKKQVSVLEEP 1577
              F +         +     + ++I        G     F     FETI+KKQV  + EP
Sbjct: 364  RIFHERFPFELVKMEFDEKELRREISYAIKNIHGIRTGLFTPDMAFETIVKKQVKKIREP 423

Query: 1578 ---AVDML 1592
                VDM+
Sbjct: 424  CLKCVDMV 431


>ref|NP_001005361.1| dynamin-2 isoform 2 [Homo sapiens].
          Length = 870

 Score =  234 bits (597), Expect = 3e-61
 Identities = 163/491 (33%), Positives = 260/491 (52%), Gaps = 7/491 (1%)
 Frame = +3

Query: 309  EKVRPCID-LIDSLRALGVEQDLALPAIAVIGDQSSGKSSVLEALSGVA-LPRGSGIVTR 482
            E++ P ++ L D+  ++G    L LP IAV+G QS+GKSSVLE   G   LPRGSGIVTR
Sbjct: 7    EELIPLVNKLQDAFSSIGQSCHLDLPQIAVVGGQSAGKSSVLENFVGRDFLPRGSGIVTR 66

Query: 483  CPXXXXXXXXXNEEDEWKGKVSYRDSEIELSDASQVEKEVSAAQIAIAGEGVGISHELIS 662
             P          E  E+    S +      +D  +V +E+ A    + G   GIS   I+
Sbjct: 67   RPLILQLIFSKTEHAEFLHCKSKK-----FTDFDEVRQEIEAETDRVTGTNKGISPVPIN 121

Query: 663  LEVSSPHVPDLTLIDLPGITRVAVGNQPYDIEYQIKSLIKKYICKQETINLVVVPCNVDI 842
            L V SPHV +LTLIDLPGIT+V VG+QP DIEYQIK +I ++I ++ ++ L V P N+D+
Sbjct: 122  LRVYSPHVLNLTLIDLPGITKVPVGDQPPDIEYQIKDMILQFISRESSLILAVTPANMDL 181

Query: 843  ATTEALRMAQEVDPEGDRTIGILTKPDLVDKGTEDKIVDVARNLVFHPKKGYMIVKCRGQ 1022
            A ++AL++A+EVDP+G RTIG++TK DL+D+GT+ +  DV  N +   ++GY+ V  R Q
Sbjct: 182  ANSDALKLAKEVDPQGLRTIGVITKLDLMDEGTDAR--DVLENKLLPLRRGYIGVVNRSQ 239

Query: 1023 QDIQDQLSLAKALQKEQAFFENHAHFRDLLEEGRATIPCLAERLTSELIMHICKTLPLLE 1202
            +DI+ +  +  AL  E+ FF +H  +R + +  R   P L + L  +L  HI ++LP L 
Sbjct: 240  KDIEGKKDIRAALAAERKFFLSHPAYRHMAD--RMGTPHLQKTLNQQLTNHIRESLPALR 297

Query: 1203 NQIKESHQKITEELQKYGSDIPEDESGKMFFLIDKIDAFNSDITALIQG-----EELVVE 1367
            ++++     + +E+++Y +  P+D + K   L+  +  F  D    I+G     + L + 
Sbjct: 298  SKLQSQLLSLEKEVEEYKNFRPDDPTRKTKALLQMVQQFGVDFEKRIEGSGDQVDTLELS 357

Query: 1368 YECRLFTKMRNEFCKWSAVVEKNFKNGYDAICKQIQLFENQYRGRELPGFVNYKTFETII 1547
               R+       F      +E + K+    + ++I        G     F     FE I+
Sbjct: 358  GGARINRIFHERFPFELVKMEFDEKD----LRREISYAIKNIHGVRTGLFTPDMAFEAIV 413

Query: 1548 KKQVSVLEEPAVDMLHTVTDLVRLAFTDVSETNFNEFFNLHRTAKSKIEDIKLEQEKEAE 1727
            KKQ+  L+EP++  +  V   +       +E   + +  L    +  +     E+E   +
Sbjct: 414  KKQIVKLKEPSLKCVDLVVSELATVIKKCAE-KLSSYPRLREETERIVTTYIREREGRTK 472

Query: 1728 TSIRLHFQMEQ 1760
              I L   +EQ
Sbjct: 473  DQILLLIDIEQ 483


>ref|NP_001005362.1| dynamin-2 isoform 4 [Homo sapiens].
          Length = 866

 Score =  234 bits (597), Expect = 3e-61
 Identities = 163/491 (33%), Positives = 260/491 (52%), Gaps = 7/491 (1%)
 Frame = +3

Query: 309  EKVRPCID-LIDSLRALGVEQDLALPAIAVIGDQSSGKSSVLEALSGVA-LPRGSGIVTR 482
            E++ P ++ L D+  ++G    L LP IAV+G QS+GKSSVLE   G   LPRGSGIVTR
Sbjct: 7    EELIPLVNKLQDAFSSIGQSCHLDLPQIAVVGGQSAGKSSVLENFVGRDFLPRGSGIVTR 66

Query: 483  CPXXXXXXXXXNEEDEWKGKVSYRDSEIELSDASQVEKEVSAAQIAIAGEGVGISHELIS 662
             P          E  E+    S +      +D  +V +E+ A    + G   GIS   I+
Sbjct: 67   RPLILQLIFSKTEHAEFLHCKSKK-----FTDFDEVRQEIEAETDRVTGTNKGISPVPIN 121

Query: 663  LEVSSPHVPDLTLIDLPGITRVAVGNQPYDIEYQIKSLIKKYICKQETINLVVVPCNVDI 842
            L V SPHV +LTLIDLPGIT+V VG+QP DIEYQIK +I ++I ++ ++ L V P N+D+
Sbjct: 122  LRVYSPHVLNLTLIDLPGITKVPVGDQPPDIEYQIKDMILQFISRESSLILAVTPANMDL 181

Query: 843  ATTEALRMAQEVDPEGDRTIGILTKPDLVDKGTEDKIVDVARNLVFHPKKGYMIVKCRGQ 1022
            A ++AL++A+EVDP+G RTIG++TK DL+D+GT+ +  DV  N +   ++GY+ V  R Q
Sbjct: 182  ANSDALKLAKEVDPQGLRTIGVITKLDLMDEGTDAR--DVLENKLLPLRRGYIGVVNRSQ 239

Query: 1023 QDIQDQLSLAKALQKEQAFFENHAHFRDLLEEGRATIPCLAERLTSELIMHICKTLPLLE 1202
            +DI+ +  +  AL  E+ FF +H  +R + +  R   P L + L  +L  HI ++LP L 
Sbjct: 240  KDIEGKKDIRAALAAERKFFLSHPAYRHMAD--RMGTPHLQKTLNQQLTNHIRESLPALR 297

Query: 1203 NQIKESHQKITEELQKYGSDIPEDESGKMFFLIDKIDAFNSDITALIQG-----EELVVE 1367
            ++++     + +E+++Y +  P+D + K   L+  +  F  D    I+G     + L + 
Sbjct: 298  SKLQSQLLSLEKEVEEYKNFRPDDPTRKTKALLQMVQQFGVDFEKRIEGSGDQVDTLELS 357

Query: 1368 YECRLFTKMRNEFCKWSAVVEKNFKNGYDAICKQIQLFENQYRGRELPGFVNYKTFETII 1547
               R+       F      +E + K+    + ++I        G     F     FE I+
Sbjct: 358  GGARINRIFHERFPFELVKMEFDEKD----LRREISYAIKNIHGVRTGLFTPDMAFEAIV 413

Query: 1548 KKQVSVLEEPAVDMLHTVTDLVRLAFTDVSETNFNEFFNLHRTAKSKIEDIKLEQEKEAE 1727
            KKQ+  L+EP++  +  V   +       +E   + +  L    +  +     E+E   +
Sbjct: 414  KKQIVKLKEPSLKCVDLVVSELATVIKKCAE-KLSSYPRLREETERIVTTYIREREGRTK 472

Query: 1728 TSIRLHFQMEQ 1760
              I L   +EQ
Sbjct: 473  DQILLLIDIEQ 483


>ref|NP_001005360.1| dynamin-2 isoform 1 [Homo sapiens].
          Length = 870

 Score =  233 bits (593), Expect = 8e-61
 Identities = 168/487 (34%), Positives = 258/487 (52%), Gaps = 10/487 (2%)
 Frame = +3

Query: 309  EKVRPCID-LIDSLRALGVEQDLALPAIAVIGDQSSGKSSVLEALSGVA-LPRGSGIVTR 482
            E++ P ++ L D+  ++G    L LP IAV+G QS+GKSSVLE   G   LPRGSGIVTR
Sbjct: 7    EELIPLVNKLQDAFSSIGQSCHLDLPQIAVVGGQSAGKSSVLENFVGRDFLPRGSGIVTR 66

Query: 483  CPXXXXXXXXXNEEDEWKGKVSYRDSEIELSDASQVEKEVSAAQIAIAGEGVGISHELIS 662
             P          E  E+    S +      +D  +V +E+ A    + G   GIS   I+
Sbjct: 67   RPLILQLIFSKTEHAEFLHCKSKK-----FTDFDEVRQEIEAETDRVTGTNKGISPVPIN 121

Query: 663  LEVSSPHVPDLTLIDLPGITRVAVGNQPYDIEYQIKSLIKKYICKQETINLVVVPCNVDI 842
            L V SPHV +LTLIDLPGIT+V VG+QP DIEYQIK +I ++I ++ ++ L V P N+D+
Sbjct: 122  LRVYSPHVLNLTLIDLPGITKVPVGDQPPDIEYQIKDMILQFISRESSLILAVTPANMDL 181

Query: 843  ATTEALRMAQEVDPEGDRTIGILTKPDLVDKGTEDKIVDVARNLVFHPKKGYMIVKCRGQ 1022
            A ++AL++A+EVDP+G RTIG++TK DL+D+GT+ +  DV  N +   ++GY+ V  R Q
Sbjct: 182  ANSDALKLAKEVDPQGLRTIGVITKLDLMDEGTDAR--DVLENKLLPLRRGYIGVVNRSQ 239

Query: 1023 QDIQDQLSLAKALQKEQAFFENHAHFRDLLEEGRATIPCLAERLTSELIMHICKTLPLLE 1202
            +DI+ +  +  AL  E+ FF +H  +R + +  R   P L + L  +L  HI ++LP L 
Sbjct: 240  KDIEGKKDIRAALAAERKFFLSHPAYRHMAD--RMGTPHLQKTLNQQLTNHIRESLPALR 297

Query: 1203 NQIKESHQKITEELQKYGSDIPEDESGKMFFLIDKIDAFNSDITALIQG-----EELVVE 1367
            ++++     + +E+++Y +  P+D + K   L+  +  F  D    I+G     + L + 
Sbjct: 298  SKLQSQLLSLEKEVEEYKNFRPDDPTRKTKALLQMVQQFGVDFEKRIEGSGDQVDTLELS 357

Query: 1368 YECRLFTKMRNEFCKWSAVVEKNFKNGYDAICKQIQLFENQYRGRELPGFVNYKTFETII 1547
               R+       F      +E + K+    + ++I        G     F     FE I+
Sbjct: 358  GGARINRIFHERFPFELVKMEFDEKD----LRREISYAIKNIHGVRTGLFTPDLAFEAIV 413

Query: 1548 KKQVSVLEEPAVDMLHTVTDLVRLAFTDVSETNFNEFFNLHRTAKSKIED---IKLEQEK 1718
            KKQV  L+EP +  +    DLV             E  N  R   SK+     ++ E E+
Sbjct: 414  KKQVVKLKEPCLKCV----DLV-----------IQELINTVRQCTSKLSSYPRLREETER 458

Query: 1719 EAETSIR 1739
               T IR
Sbjct: 459  IVTTYIR 465


>ref|NP_004936.2| dynamin-2 isoform 3 [Homo sapiens].
          Length = 866

 Score =  233 bits (593), Expect = 8e-61
 Identities = 168/487 (34%), Positives = 258/487 (52%), Gaps = 10/487 (2%)
 Frame = +3

Query: 309  EKVRPCID-LIDSLRALGVEQDLALPAIAVIGDQSSGKSSVLEALSGVA-LPRGSGIVTR 482
            E++ P ++ L D+  ++G    L LP IAV+G QS+GKSSVLE   G   LPRGSGIVTR
Sbjct: 7    EELIPLVNKLQDAFSSIGQSCHLDLPQIAVVGGQSAGKSSVLENFVGRDFLPRGSGIVTR 66

Query: 483  CPXXXXXXXXXNEEDEWKGKVSYRDSEIELSDASQVEKEVSAAQIAIAGEGVGISHELIS 662
             P          E  E+    S +      +D  +V +E+ A    + G   GIS   I+
Sbjct: 67   RPLILQLIFSKTEHAEFLHCKSKK-----FTDFDEVRQEIEAETDRVTGTNKGISPVPIN 121

Query: 663  LEVSSPHVPDLTLIDLPGITRVAVGNQPYDIEYQIKSLIKKYICKQETINLVVVPCNVDI 842
            L V SPHV +LTLIDLPGIT+V VG+QP DIEYQIK +I ++I ++ ++ L V P N+D+
Sbjct: 122  LRVYSPHVLNLTLIDLPGITKVPVGDQPPDIEYQIKDMILQFISRESSLILAVTPANMDL 181

Query: 843  ATTEALRMAQEVDPEGDRTIGILTKPDLVDKGTEDKIVDVARNLVFHPKKGYMIVKCRGQ 1022
            A ++AL++A+EVDP+G RTIG++TK DL+D+GT+ +  DV  N +   ++GY+ V  R Q
Sbjct: 182  ANSDALKLAKEVDPQGLRTIGVITKLDLMDEGTDAR--DVLENKLLPLRRGYIGVVNRSQ 239

Query: 1023 QDIQDQLSLAKALQKEQAFFENHAHFRDLLEEGRATIPCLAERLTSELIMHICKTLPLLE 1202
            +DI+ +  +  AL  E+ FF +H  +R + +  R   P L + L  +L  HI ++LP L 
Sbjct: 240  KDIEGKKDIRAALAAERKFFLSHPAYRHMAD--RMGTPHLQKTLNQQLTNHIRESLPALR 297

Query: 1203 NQIKESHQKITEELQKYGSDIPEDESGKMFFLIDKIDAFNSDITALIQG-----EELVVE 1367
            ++++     + +E+++Y +  P+D + K   L+  +  F  D    I+G     + L + 
Sbjct: 298  SKLQSQLLSLEKEVEEYKNFRPDDPTRKTKALLQMVQQFGVDFEKRIEGSGDQVDTLELS 357

Query: 1368 YECRLFTKMRNEFCKWSAVVEKNFKNGYDAICKQIQLFENQYRGRELPGFVNYKTFETII 1547
               R+       F      +E + K+    + ++I        G     F     FE I+
Sbjct: 358  GGARINRIFHERFPFELVKMEFDEKD----LRREISYAIKNIHGVRTGLFTPDLAFEAIV 413

Query: 1548 KKQVSVLEEPAVDMLHTVTDLVRLAFTDVSETNFNEFFNLHRTAKSKIED---IKLEQEK 1718
            KKQV  L+EP +  +    DLV             E  N  R   SK+     ++ E E+
Sbjct: 414  KKQVVKLKEPCLKCV----DLV-----------IQELINTVRQCTSKLSSYPRLREETER 458

Query: 1719 EAETSIR 1739
               T IR
Sbjct: 459  IVTTYIR 465


  Database: RefSeq49_HP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,297,164
  Number of sequences in database:  32,964
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 83,990,433
Number of extensions: 2003532
Number of successful extensions: 7372
Number of sequences better than 1.0e-05: 24
Number of HSP's gapped: 7289
Number of HSP's successfully gapped: 24
Length of query: 828
Length of database: 18,297,164
Length adjustment: 111
Effective length of query: 717
Effective length of database: 14,638,160
Effective search space: 10495560720
Effective search space used: 10495560720
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

Search to RefSeqMP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-000493
         (2486 letters)

Database: RefSeq49_MP.fasta 
           30,036 sequences; 15,617,559 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_038634.1| interferon-induced GTP-binding protein Mx2 [Mus...   862   0.0  
Alignment   gi|NP_034976.1| interferon-induced GTP-binding protein Mx1 [Mus...   738   0.0  
Alignment   gi|NP_034195.2| dynamin-1 [Mus musculus].                            235   1e-61
Alignment   gi|NP_001034609.1| dynamin-2 [Mus musculus].                         233   7e-61
Alignment   gi|NP_001033708.1| dynamin-3 isoform 1 [Mus musculus].               224   2e-58
Alignment   gi|NP_766234.1| dynamin-3 isoform 2 [Mus musculus].                  224   2e-58
Alignment   gi|NP_001021118.1| dynamin-1-like protein isoform b [Mus muscul...   186   6e-47
Alignment   gi|NP_690029.2| dynamin-1-like protein isoform a [Mus musculus].     181   2e-45
Alignment   gi|NP_001186106.1| dynamin-like 120 kDa protein, mitochondrial ...    94   4e-19
Alignment   gi|NP_598513.1| dynamin-like 120 kDa protein, mitochondrial iso...    94   4e-19

>ref|NP_038634.1| interferon-induced GTP-binding protein Mx2 [Mus musculus].
          Length = 655

 Score =  862 bits (2228), Expect = 0.0
 Identities = 451/656 (68%), Positives = 513/656 (78%)
 Frame = +3

Query: 171  MVYSNCESKEPDSVSASNHLLLNGNDELVEKSHKTGPENNLYSQYEEKVRPCIDLIDSLR 350
            MV S  E+   DSV+     L +G   L EK  ++   NNL SQYEEKVRPCIDLIDSLR
Sbjct: 1    MVLSTEENTGVDSVN-----LPSGETGLGEKDQES--VNNLCSQYEEKVRPCIDLIDSLR 53

Query: 351  ALGVEQDLALPAIAVIGDQSSGKSSVLEALSGVALPRGSGIVTRCPXXXXXXXXXNEEDE 530
            ALGVEQDLALPAIAVIGDQSSGKSSVLEALSGVALPRGSGIVTRCP         NE +E
Sbjct: 54   ALGVEQDLALPAIAVIGDQSSGKSSVLEALSGVALPRGSGIVTRCPLVLKLRKL-NEGEE 112

Query: 531  WKGKVSYRDSEIELSDASQVEKEVSAAQIAIAGEGVGISHELISLEVSSPHVPDLTLIDL 710
            W+GKVSY D E+ELSD S+VE+ ++  Q  IAG G+GIS +LISL+VSSP+VPDLTLIDL
Sbjct: 113  WRGKVSYDDIEVELSDPSEVEEAINKGQNFIAGVGLGISDKLISLDVSSPNVPDLTLIDL 172

Query: 711  PGITRVAVGNQPYDIEYQIKSLIKKYICKQETINLVVVPCNVDIATTEALRMAQEVDPEG 890
            PGITRVAVGNQP DI  QIK LIK YI KQETINLVVVP NVDIATTEAL MAQEVDPEG
Sbjct: 173  PGITRVAVGNQPADIGRQIKRLIKTYIQKQETINLVVVPSNVDIATTEALSMAQEVDPEG 232

Query: 891  DRTIGILTKPDLVDKGTEDKIVDVARNLVFHPKKGYMIVKCRGQQDIQDQLSLAKALQKE 1070
            DRTIGILTKPDLVD+GTEDK+VDV RNLV+H KKGYMIVKCRGQQDIQ+QLSL +ALQ E
Sbjct: 233  DRTIGILTKPDLVDRGTEDKVVDVVRNLVYHLKKGYMIVKCRGQQDIQEQLSLTEALQNE 292

Query: 1071 QAFFENHAHFRDLLEEGRATIPCLAERLTSELIMHICKTLPLLENQIKESHQKITEELQK 1250
            Q FF+ H HFR LLE+G+AT+PCLAERLT+ELI+HICK+LPLLENQIKESHQ  +EELQK
Sbjct: 293  QIFFKEHPHFRVLLEDGKATVPCLAERLTAELILHICKSLPLLENQIKESHQSASEELQK 352

Query: 1251 YGSDIPEDESGKMFFLIDKIDAFNSDITALIQGEELVVEYECRLFTKMRNEFCKWSAVVE 1430
            YG DIPED+S K FFLI+KI+AFN DITAL+QGEE V E ECRLFT++R EF  WS  +E
Sbjct: 353  YGMDIPEDDSEKTFFLIEKINAFNQDITALVQGEENVAEGECRLFTRLRKEFLSWSKEIE 412

Query: 1431 KNFKNGYDAICKQIQLFENQYRGRELPGFVNYKTFETIIKKQVSVLEEPAVDMLHTVTDL 1610
            KNF  GY  +  ++  FE QYRGRELPGFVNYKTFE II++Q+  LEEPA++MLHTVT++
Sbjct: 413  KNFAKGYAVLYNEVWAFEKQYRGRELPGFVNYKTFENIIRRQIKTLEEPAIEMLHTVTEI 472

Query: 1611 VRLAFTDVSETNFNEFFNLHRTAKSKIEDIKLEQEKEAETSIRLHFQMEQIVYCQDQVYR 1790
            VR AFT VSE NF+EF+NLHRT KSK+EDI+LEQEKEAE SIRLHF+MEQI+YCQDQ+YR
Sbjct: 473  VRAAFTSVSEKNFSEFYNLHRTTKSKLEDIRLEQEKEAEMSIRLHFKMEQIIYCQDQIYR 532

Query: 1791 GALQXXXXXXXXXXXXXXSNQYFLXXXXXXXXXXIAEIFQHLIAYHQEVGKRISSHIPLI 1970
            GALQ                              +AEIFQHL AY QE   RISSH+PLI
Sbjct: 533  GALQKVREEEAEEEKKTKHGTSSSSQSQDLQTSSMAEIFQHLNAYRQEAHNRISSHVPLI 592

Query: 1971 IQFFILRTFGXXXXXXXXXXXXNKDQYDWLLRERSDTSDKRKFLKERLMRLTQARQ 2138
            IQ+FIL+ F             +KD   WLL+E+SDTS+KRKFLKERL RL QAR+
Sbjct: 593  IQYFILKMFAERLQKGMLQLLQDKDSCSWLLKEQSDTSEKRKFLKERLARLAQARR 648


>ref|NP_034976.1| interferon-induced GTP-binding protein Mx1 [Mus musculus].
          Length = 631

 Score =  738 bits (1906), Expect = 0.0
 Identities = 392/626 (62%), Positives = 463/626 (73%), Gaps = 8/626 (1%)
 Frame = +3

Query: 285  NNLYSQYEEKVRPCIDLIDSLRALGVEQDLALPAIAVIGDQSSGKSSVLEALSGVALPRG 464
            NNL   YEEKVRPCIDLID+LRALGVEQDLALPAIAVIGDQSSGKSSVLEALSGVALPRG
Sbjct: 5    NNLCRHYEEKVRPCIDLIDTLRALGVEQDLALPAIAVIGDQSSGKSSVLEALSGVALPRG 64

Query: 465  SGIVTRCPXXXXXXXXXNEEDEWKGKVSYRDSEIELSDASQVEKEVSAAQIAIAGEGVGI 644
            SGIVTRCP          E +EW+GKVSY D E+ELSD S+VE+ ++  Q  IAG G+GI
Sbjct: 65   SGIVTRCPLVLKLRKL-KEGEEWRGKVSYDDIEVELSDPSEVEEAINKGQNFIAGVGLGI 123

Query: 645  SHELISLEVSSPHVPDLTLIDLPGITRVAVGNQPYDIEYQIKSLIKKYICKQETINLVVV 824
            S +LISL+VSSP+VPDLTLIDLPGITRVAVGNQP DI  QIK LIK YI KQETINLVVV
Sbjct: 124  SDKLISLDVSSPNVPDLTLIDLPGITRVAVGNQPADIGRQIKRLIKTYIQKQETINLVVV 183

Query: 825  PCNVDIATTEALRMAQEVDPEGDRTIGILTKPDLVDKGTEDKIVDVARNLVFHPKKGYMI 1004
            P NVDIATTEAL MAQEVDPEGDRTIG+LTKPDLVD+G E K++DV RNLV+  KKGYMI
Sbjct: 184  PSNVDIATTEALSMAQEVDPEGDRTIGVLTKPDLVDRGAEGKVLDVMRNLVYPLKKGYMI 243

Query: 1005 VKCRGQQDIQDQLSLAKALQKEQAFFENHAHFRDLLEEGRATIPCLAERLTSELIMHICK 1184
            VKCRGQQDIQ+QLSL +A QKEQ FF++H++F  LLE+G+AT+PCLAERLT EL  HICK
Sbjct: 244  VKCRGQQDIQEQLSLTEAFQKEQVFFKDHSYFSILLEDGKATVPCLAERLTEELTSHICK 303

Query: 1185 TLPLLENQIKESHQKITEELQKYGSDIPEDESGKMFFLIDKIDAFNSDITALIQGEELVV 1364
            +LPLLE+QI  SHQ  +EELQKYG+DIPED+  +M FL++KI AFN +I  LIQ +E V 
Sbjct: 304  SLPLLEDQINSSHQSASEELQKYGADIPEDDRTRMSFLVNKISAFNRNIMNLIQAQETVS 363

Query: 1365 EYECRLFTKMRNEFCKWSAVVEKNFKNGYDAICKQIQLFENQYRGRELPGFVNYKTFETI 1544
            E + RLFTK+RNEF  W   +E+ FK     +  +++ FENQYRGRELPGFV+YK FE+I
Sbjct: 364  EGDSRLFTKLRNEFLAWDDHIEEYFKKDSPEVQSKMKEFENQYRGRELPGFVDYKAFESI 423

Query: 1545 IKKQVSVLEEPAVDMLHTVTDLVRLAFTDVSETNFNEFFNLHRTAKSKIEDIKLEQEKEA 1724
            IKK+V  LEE AV+ML  VT +V+ AF  +   +F +F NL  TAKSKI++I+L QEKEA
Sbjct: 424  IKKRVKALEESAVNMLRRVTKMVQTAFVKILSNDFGDFLNLCCTAKSKIKEIRLNQEKEA 483

Query: 1725 ETSIRLHFQMEQIVYCQDQVYRGAL--------QXXXXXXXXXXXXXXSNQYFLXXXXXX 1880
            E  IRLHFQMEQIVYCQDQVY+  L        +              +N  F       
Sbjct: 484  ENLIRLHFQMEQIVYCQDQVYKETLKTIREKEAEKEKTKALINPATFQNNSQF-----PQ 538

Query: 1881 XXXXIAEIFQHLIAYHQEVGKRISSHIPLIIQFFILRTFGXXXXXXXXXXXXNKDQYDWL 2060
                  E+ QHL AY+QE  + I   IPLIIQ+FIL+TFG            +  +  W 
Sbjct: 539  KGLTTTEMTQHLKAYYQECRRNIGRQIPLIIQYFILKTFGEEIEKMMLQLLQDTSKCSWF 598

Query: 2061 LRERSDTSDKRKFLKERLMRLTQARQ 2138
            L E+SDT +K+KFLK RL+RL +ARQ
Sbjct: 599  LEEQSDTREKKKFLKRRLLRLDEARQ 624


>ref|NP_034195.2| dynamin-1 [Mus musculus].
          Length = 864

 Score =  235 bits (600), Expect = 1e-61
 Identities = 157/428 (36%), Positives = 232/428 (54%), Gaps = 8/428 (1%)
 Frame = +3

Query: 333  LIDSLRALGVEQDLALPAIAVIGDQSSGKSSVLEALSGVA-LPRGSGIVTRCPXXXXXXX 509
            L D+  A+G   DL LP IAV+G QS+GKSSVLE   G   LPRGSGIVTR P       
Sbjct: 16   LQDAFSAIGQNADLDLPQIAVVGGQSAGKSSVLENFVGRDFLPRGSGIVTRRPLVLQLVN 75

Query: 510  XXNEEDEW---KGKVSYRDSEIELSDASQVEKEVSAAQIAIAGEGVGISHELISLEVSSP 680
               E  E+   KGK        + +D  +V  E+ A    + G   GIS   I+L V SP
Sbjct: 76   STTEYAEFLHCKGK--------KFTDFEEVRLEIEAETDRVTGTNKGISPVPINLRVYSP 127

Query: 681  HVPDLTLIDLPGITRVAVGNQPYDIEYQIKSLIKKYICKQETINLVVVPCNVDIATTEAL 860
            HV +LTL+DLPG+T+V VG+QP DIE+QI+ ++ +++ K+  + L V P N D+A ++AL
Sbjct: 128  HVLNLTLVDLPGMTKVPVGDQPPDIEFQIRDMLMQFVTKENCLILAVSPANSDLANSDAL 187

Query: 861  RMAQEVDPEGDRTIGILTKPDLVDKGTEDKIVDVARNLVFHPKKGYMIVKCRGQQDIQDQ 1040
            ++A+EVDP+G RTIG++TK DL+D+GT+ +  DV  N +   ++GY+ V  R Q+DI  +
Sbjct: 188  KIAKEVDPQGQRTIGVITKLDLMDEGTDAR--DVLENKLLPLRRGYIGVVNRSQKDIDGK 245

Query: 1041 LSLAKALQKEQAFFENHAHFRDLLEEGRATIPCLAERLTSELIMHICKTLPLLENQIKES 1220
              +  AL  E+ FF +H  +R L +  R   P L + L  +L  HI  TLP L N+++  
Sbjct: 246  KDITAALAAERKFFLSHPSYRHLAD--RMGTPYLQKVLNQQLTNHIRDTLPGLRNKLQSQ 303

Query: 1221 HQKITEELQKYGSDIPEDESGKMFFLIDKIDAFNSDITALIQGE-ELVVEYECRLFTKMR 1397
               I +E+ +Y +  P+D + K   L+  +  F  D    I+G  + +  YE     ++ 
Sbjct: 304  LLSIEKEVDEYKNFRPDDPARKTKALLQMVQQFAVDFEKRIEGSGDQIDTYELSGGARIN 363

Query: 1398 NEFCKWSAVVEKNFKNGYDAICKQIQLFENQYRGRELPGFVNYKTFETIIKKQVSVLEEP 1577
              F +         +     + ++I        G     F     FETI+KKQV  + EP
Sbjct: 364  RIFHERFPFELVKMEFDEKELRREISYAIKNIHGIRTGLFTPDMAFETIVKKQVKKIREP 423

Query: 1578 ---AVDML 1592
                VDM+
Sbjct: 424  CLKCVDMV 431


>ref|NP_001034609.1| dynamin-2 [Mus musculus].
          Length = 869

 Score =  233 bits (593), Expect = 7e-61
 Identities = 163/491 (33%), Positives = 260/491 (52%), Gaps = 7/491 (1%)
 Frame = +3

Query: 309  EKVRPCID-LIDSLRALGVEQDLALPAIAVIGDQSSGKSSVLEALSGVA-LPRGSGIVTR 482
            E++ P ++ L D+  ++G    L LP IAV+G QS+GKSSVLE   G   LPRGSGIVTR
Sbjct: 7    EELIPLVNKLQDAFSSIGQSCHLDLPQIAVVGGQSAGKSSVLENFVGRDFLPRGSGIVTR 66

Query: 483  CPXXXXXXXXXNEEDEWKGKVSYRDSEIELSDASQVEKEVSAAQIAIAGEGVGISHELIS 662
             P          E  E+    S +      +D  +V +E+ A    + G   GIS   I+
Sbjct: 67   RPLILQLIFSKTEYAEFLHCKSKK-----FTDFDEVRQEIEAETDRVTGTNKGISPVPIN 121

Query: 663  LEVSSPHVPDLTLIDLPGITRVAVGNQPYDIEYQIKSLIKKYICKQETINLVVVPCNVDI 842
            L V SPHV +LTLIDLPGIT+V VG+QP DIEYQIK +I ++I ++ ++ L V P N+D+
Sbjct: 122  LRVYSPHVLNLTLIDLPGITKVPVGDQPPDIEYQIKDMILQFISRESSLILAVTPANMDL 181

Query: 843  ATTEALRMAQEVDPEGDRTIGILTKPDLVDKGTEDKIVDVARNLVFHPKKGYMIVKCRGQ 1022
            A ++AL++A+EVDP+G RTIG++TK DL+D+GT+ +  DV  N +   ++GY+ V  R Q
Sbjct: 182  ANSDALKLAKEVDPQGLRTIGVITKLDLMDEGTDAR--DVLENKLLPLRRGYIGVVNRSQ 239

Query: 1023 QDIQDQLSLAKALQKEQAFFENHAHFRDLLEEGRATIPCLAERLTSELIMHICKTLPLLE 1202
            +DI+ +  +  AL  E+ FF +H  +R + +  R   P L + L  +L  HI ++LP L 
Sbjct: 240  KDIEGKKDIRAALAAERKFFLSHPAYRHMAD--RMGTPHLQKTLNQQLTNHIRESLPTLR 297

Query: 1203 NQIKESHQKITEELQKYGSDIPEDESGKMFFLIDKIDAFNSDITALIQG-----EELVVE 1367
            ++++     + +E+++Y +  P+D + K   L+  +  F  D    I+G     + L + 
Sbjct: 298  SKLQSQLLSLEKEVEEYKNFRPDDPTRKTKALLQMVQQFGVDFEKRIEGSGDQVDTLELS 357

Query: 1368 YECRLFTKMRNEFCKWSAVVEKNFKNGYDAICKQIQLFENQYRGRELPGFVNYKTFETII 1547
               R+       F      +E + K+    + ++I        G     F     FE I+
Sbjct: 358  GGARINRIFHERFPFELVKMEFDEKD----LRREISYAIKNIHGVRTGLFTPDMAFEAIV 413

Query: 1548 KKQVSVLEEPAVDMLHTVTDLVRLAFTDVSETNFNEFFNLHRTAKSKIEDIKLEQEKEAE 1727
            KKQ+  L+EP++  +  V   +       +E   + +  L    +  +     E+E   +
Sbjct: 414  KKQLVKLKEPSLKCVDLVVSELATVIKKCAE-KLSSYPRLREETERIVTTYIREREGRTK 472

Query: 1728 TSIRLHFQMEQ 1760
              I L   +EQ
Sbjct: 473  DQILLLIDIEQ 483


>ref|NP_001033708.1| dynamin-3 isoform 1 [Mus musculus].
          Length = 863

 Score =  224 bits (571), Expect = 2e-58
 Identities = 157/437 (35%), Positives = 233/437 (53%), Gaps = 6/437 (1%)
 Frame = +3

Query: 309  EKVRPCID-LIDSLRALGVEQDLALPAIAVIGDQSSGKSSVLEALSGVA-LPRGSGIVTR 482
            E++ P ++ L D+  ALG    L LP IAV+G QS+GKSSVLE   G   LPRGSGIVTR
Sbjct: 7    EELIPLVNRLQDAFSALGQSCLLELPQIAVVGGQSAGKSSVLENFVGRDFLPRGSGIVTR 66

Query: 483  CPXXXXXXXXXNEEDEW---KGKVSYRDSEIELSDASQVEKEVSAAQIAIAGEGVGISHE 653
             P          E  E+   KGK        + +D  +V  E+ A    + G   GIS  
Sbjct: 67   RPLVLQLVTSKAEYAEFLHCKGK--------KFTDFDEVRHEIEAETDRVTGMNKGISSI 118

Query: 654  LISLEVSSPHVPDLTLIDLPGITRVAVGNQPYDIEYQIKSLIKKYICKQETINLVVVPCN 833
             I+L V SPHV +LTLIDLPGIT+V VG+QP DIEYQI+ +I ++I ++  + L V P N
Sbjct: 119  PINLRVYSPHVLNLTLIDLPGITKVPVGDQPPDIEYQIRDMIMQFITRENCLILAVTPAN 178

Query: 834  VDIATTEALRMAQEVDPEGDRTIGILTKPDLVDKGTEDKIVDVARNLVFHPKKGYMIVKC 1013
             D+A ++AL++A+EVDP+G RTIG++TK DL+D+GT+ +  DV  N +   ++GY+ V  
Sbjct: 179  TDLANSDALKLAKEVDPQGLRTIGVITKLDLMDEGTDAR--DVLENKLLPLRRGYVGVVN 236

Query: 1014 RGQQDIQDQLSLAKALQKEQAFFENHAHFRDLLEEGRATIPCLAERLTSELIMHICKTLP 1193
            R Q+DI  +  +  A+  E+ FF +H  +R + +  R   P L + L  +L  HI  TLP
Sbjct: 237  RSQKDIDGKKDIKAAMLAERKFFLSHPAYRHIAD--RMGTPHLQKVLNQQLTNHIRDTLP 294

Query: 1194 LLENQIKESHQKITEELQKYGSDIPEDESGKMFFLIDKIDAFNSDITALIQGE-ELVVEY 1370
               N+++     I  E++ + +  PED + K   L+  +  F  D    I+G  + V   
Sbjct: 295  NFRNKLQGQLLSIEHEVEAFKNFKPEDPTRKTKALLQMVQQFAVDFEKRIEGSGDQVDTL 354

Query: 1371 ECRLFTKMRNEFCKWSAVVEKNFKNGYDAICKQIQLFENQYRGRELPGFVNYKTFETIIK 1550
            E     K+   F +         +     + ++I        G     F     FE I+K
Sbjct: 355  ELSGGAKINRIFHERFPFEIVKMEFNEKELRREISYAIKNIHGIRTGLFTPDMAFEAIVK 414

Query: 1551 KQVSVLEEPAVDMLHTV 1601
            KQ+  L+ P++  +  V
Sbjct: 415  KQIVKLKGPSLKSVDLV 431


>ref|NP_766234.1| dynamin-3 isoform 2 [Mus musculus].
          Length = 859

 Score =  224 bits (571), Expect = 2e-58
 Identities = 157/437 (35%), Positives = 233/437 (53%), Gaps = 6/437 (1%)
 Frame = +3

Query: 309  EKVRPCID-LIDSLRALGVEQDLALPAIAVIGDQSSGKSSVLEALSGVA-LPRGSGIVTR 482
            E++ P ++ L D+  ALG    L LP IAV+G QS+GKSSVLE   G   LPRGSGIVTR
Sbjct: 7    EELIPLVNRLQDAFSALGQSCLLELPQIAVVGGQSAGKSSVLENFVGRDFLPRGSGIVTR 66

Query: 483  CPXXXXXXXXXNEEDEW---KGKVSYRDSEIELSDASQVEKEVSAAQIAIAGEGVGISHE 653
             P          E  E+   KGK        + +D  +V  E+ A    + G   GIS  
Sbjct: 67   RPLVLQLVTSKAEYAEFLHCKGK--------KFTDFDEVRHEIEAETDRVTGMNKGISSI 118

Query: 654  LISLEVSSPHVPDLTLIDLPGITRVAVGNQPYDIEYQIKSLIKKYICKQETINLVVVPCN 833
             I+L V SPHV +LTLIDLPGIT+V VG+QP DIEYQI+ +I ++I ++  + L V P N
Sbjct: 119  PINLRVYSPHVLNLTLIDLPGITKVPVGDQPPDIEYQIRDMIMQFITRENCLILAVTPAN 178

Query: 834  VDIATTEALRMAQEVDPEGDRTIGILTKPDLVDKGTEDKIVDVARNLVFHPKKGYMIVKC 1013
             D+A ++AL++A+EVDP+G RTIG++TK DL+D+GT+ +  DV  N +   ++GY+ V  
Sbjct: 179  TDLANSDALKLAKEVDPQGLRTIGVITKLDLMDEGTDAR--DVLENKLLPLRRGYVGVVN 236

Query: 1014 RGQQDIQDQLSLAKALQKEQAFFENHAHFRDLLEEGRATIPCLAERLTSELIMHICKTLP 1193
            R Q+DI  +  +  A+  E+ FF +H  +R + +  R   P L + L  +L  HI  TLP
Sbjct: 237  RSQKDIDGKKDIKAAMLAERKFFLSHPAYRHIAD--RMGTPHLQKVLNQQLTNHIRDTLP 294

Query: 1194 LLENQIKESHQKITEELQKYGSDIPEDESGKMFFLIDKIDAFNSDITALIQGE-ELVVEY 1370
               N+++     I  E++ + +  PED + K   L+  +  F  D    I+G  + V   
Sbjct: 295  NFRNKLQGQLLSIEHEVEAFKNFKPEDPTRKTKALLQMVQQFAVDFEKRIEGSGDQVDTL 354

Query: 1371 ECRLFTKMRNEFCKWSAVVEKNFKNGYDAICKQIQLFENQYRGRELPGFVNYKTFETIIK 1550
            E     K+   F +         +     + ++I        G     F     FE I+K
Sbjct: 355  ELSGGAKINRIFHERFPFEIVKMEFNEKELRREISYAIKNIHGIRTGLFTPDMAFEAIVK 414

Query: 1551 KQVSVLEEPAVDMLHTV 1601
            KQ+  L+ P++  +  V
Sbjct: 415  KQIVKLKGPSLKSVDLV 431


>ref|NP_001021118.1| dynamin-1-like protein isoform b [Mus musculus].
          Length = 699

 Score =  186 bits (473), Expect = 6e-47
 Identities = 150/455 (32%), Positives = 229/455 (50%), Gaps = 22/455 (4%)
 Frame = +3

Query: 372  LALPAIAVIGDQSSGKSSVLEALSGV-ALPRGSGIVTRCPXXXXXXXXXNEE-------- 524
            + LP I V+G QSSGKSSVLE+L G   LPRG+G+VTR P          E+        
Sbjct: 23   IQLPQIVVVGTQSSGKSSVLESLVGRDLLPRGTGVVTRRPLILQLVHVSPEDKRKTTGEE 82

Query: 525  -----DEWKGKVSYRDSEIELSDASQVEKEVSAAQIAIAGEGVGISHELISLEVSSPHVP 689
                 +EW GK  +  +++  +D  ++ +E+      I+G   G+S E I L+V SP+V 
Sbjct: 83   NGVEAEEW-GKFLHTKNKL-YTDFDEIRQEIENETERISGNNKGVSPEPIHLKVFSPNVV 140

Query: 690  DLTLIDLPGITRVAVGNQPYDIEYQIKSLIKKYICKQETINLVVVPCNVDIATTEALRMA 869
            +LTL+DLPG+T+V VG+QP DIE QI+ LI ++I    +I L V   N D+AT+EAL+++
Sbjct: 141  NLTLVDLPGMTKVPVGDQPKDIELQIRELILRFISNPNSIILAVTAANTDMATSEALKIS 200

Query: 870  QEVDPEGDRTIGILTKPDLVDKGTEDKIVDVARNLVFHPKKGYMIVKCRGQQDIQDQLSL 1049
            +EVDP+G RT+ ++TK DL+D GT+   +DV    V   K G + V  R Q DI ++ S+
Sbjct: 201  REVDPDGRRTLAVITKLDLMDAGTD--AMDVLMGRVIPVKLGIIGVVNRSQLDINNKKSV 258

Query: 1050 AKALQKEQAFFENHAHFRDLLEEGRATIPCLAERLTSELIMHICKTLPLLENQIKESHQK 1229
              +++ E AF +    +  L    R     LA  L   L+ HI   LP L+ +I     +
Sbjct: 259  TDSIRDEYAFLQK--KYPSL--ANRNGTKYLARTLNRLLMHHIRDCLPELKTRINVLAAQ 314

Query: 1230 ITEELQKYGSDIPEDESGKMFFLIDKIDAFNSDITALIQGEELVVEYE-----CRLFTKM 1394
                L  YG  + +D+S  +  LI K   F ++    I+G    +E        R+    
Sbjct: 315  YQSLLNSYGEPV-DDKSATLLQLITK---FATEYCNTIEGTAKYIETSELCGGARICYIF 370

Query: 1395 RNEFCKWSAVVEKNFKNGYDAICKQIQLFENQYRGRELPGFVNYKTFETIIKKQVSVLEE 1574
               F +    V+     G + I   I        G     FV   +FE ++K+Q+  LEE
Sbjct: 371  HETFGRTLESVDP--LGGLNTI--DILTAIRNATGPRPALFVPEVSFELLVKRQIKRLEE 426

Query: 1575 PA---VDMLHTVTDLVRLAFTDVSETNFNEFFNLH 1670
            P+   V+++H     +    ++ S      F  LH
Sbjct: 427  PSLRCVELVHEEMQRIIQHCSNYSTQELLRFPKLH 461


>ref|NP_690029.2| dynamin-1-like protein isoform a [Mus musculus].
          Length = 712

 Score =  181 bits (460), Expect = 2e-45
 Identities = 150/468 (32%), Positives = 229/468 (48%), Gaps = 35/468 (7%)
 Frame = +3

Query: 372  LALPAIAVIGDQSSGKSSVLEALSG-VALPRGSGIVTRCPXXXXXXXXXNEE-------- 524
            + LP I V+G QSSGKSSVLE+L G   LPRG+G+VTR P          E+        
Sbjct: 23   IQLPQIVVVGTQSSGKSSVLESLVGRDLLPRGTGVVTRRPLILQLVHVSPEDKRKTTGEE 82

Query: 525  ------------------DEWKGKVSYRDSEIELSDASQVEKEVSAAQIAIAGEGVGISH 650
                              +EW GK  +  +++  +D  ++ +E+      I+G   G+S 
Sbjct: 83   NDPATWKNSRHLSKGVEAEEW-GKFLHTKNKL-YTDFDEIRQEIENETERISGNNKGVSP 140

Query: 651  ELISLEVSSPHVPDLTLIDLPGITRVAVGNQPYDIEYQIKSLIKKYICKQETINLVVVPC 830
            E I L+V SP+V +LTL+DLPG+T+V VG+QP DIE QI+ LI ++I    +I L V   
Sbjct: 141  EPIHLKVFSPNVVNLTLVDLPGMTKVPVGDQPKDIELQIRELILRFISNPNSIILAVTAA 200

Query: 831  NVDIATTEALRMAQEVDPEGDRTIGILTKPDLVDKGTEDKIVDVARNLVFHPKKGYMIVK 1010
            N D+AT+EAL++++EVDP+G RT+ ++TK DL+D GT+   +DV    V   K G + V 
Sbjct: 201  NTDMATSEALKISREVDPDGRRTLAVITKLDLMDAGTD--AMDVLMGRVIPVKLGIIGVV 258

Query: 1011 CRGQQDIQDQLSLAKALQKEQAFFENHAHFRDLLEEGRATIPCLAERLTSELIMHICKTL 1190
             R Q DI ++ S+  +++ E AF +    +  L    R     LA  L   L+ HI   L
Sbjct: 259  NRSQLDINNKKSVTDSIRDEYAFLQK--KYPSL--ANRNGTKYLARTLNRLLMHHIRDCL 314

Query: 1191 PLLENQIKESHQKITEELQKYGSDIPEDESGKMFFLIDKIDAFNSDITALIQGEELVVEY 1370
            P L+ +I     +    L  YG  + +D+S  +  LI K   F ++    I+G    +E 
Sbjct: 315  PELKTRINVLAAQYQSLLNSYGEPV-DDKSATLLQLITK---FATEYCNTIEGTAKYIET 370

Query: 1371 E-----CRLFTKMRNEFCKWSAVVEKNFKNGYDAICKQIQLFENQYRGRELPGFVNYKTF 1535
                   R+       F +    V+     G + I   I        G     FV   +F
Sbjct: 371  SELCGGARICYIFHETFGRTLESVDP--LGGLNTI--DILTAIRNATGPRPALFVPEVSF 426

Query: 1536 ETIIKKQVSVLEEPA---VDMLHTVTDLVRLAFTDVSETNFNEFFNLH 1670
            E ++K+Q+  LEEP+   V+++H     +    ++ S      F  LH
Sbjct: 427  ELLVKRQIKRLEEPSLRCVELVHEEMQRIIQHCSNYSTQELLRFPKLH 474


>ref|NP_001186106.1| dynamin-like 120 kDa protein, mitochondrial isoform 1 precursor [Mus
            musculus].
          Length = 978

 Score = 94.4 bits (233), Expect = 4e-19
 Identities = 80/279 (28%), Positives = 127/279 (45%), Gaps = 5/279 (1%)
 Frame = +3

Query: 267  HKTGPENNLYSQYEEKVRPCIDLIDSLRALGVEQDLALPAIAVIGDQSSGKSSVLEALSG 446
            H    + +L   Y E     +D++    A    QD  LP + V+GDQS+GK+SVLE ++ 
Sbjct: 274  HHRKLKKSLIDMYSE----VLDVLSDYDASYNTQD-HLPRVVVVGDQSAGKTSVLEMIAQ 328

Query: 447  VAL-PRGSG-IVTRCPXXXXXXXXXNEEDEWKGKVSYRDSEIELSDASQVEKEVSAAQIA 620
              + PRGSG ++TR P         +    +K      D   E  D + +  E+      
Sbjct: 329  ARIFPRGSGEMMTRSPVKVTLSEGPHHVALFKDSSREFDLTKE-EDLAALRHEIELRMRK 387

Query: 621  IAGEGVGISHELISLEVSSPHVPDLTLIDLPGITRVAVGNQPYDIEYQIKSLIKKYICKQ 800
               EG  +S E ISL V  P +  + L+DLPG+          D +  I S+ K Y+   
Sbjct: 388  NVKEGCTVSPETISLNVKGPGLQRMVLVDLPGVINTVTSGMAPDTKETIFSISKAYMQNP 447

Query: 801  ETINLVVVPCNVDIATTEALRMAQEVDPEGDRTIGILTKPDLVDK--GTEDKIVDVARNL 974
              I L +   +VD   +    +  ++DP G RTI +LTK DL +K   +  +I  +    
Sbjct: 448  NAIILCIQDGSVDAERSIVTDLVSQMDPHGRRTIFVLTKVDLAEKNVASPSRIQQIIEGK 507

Query: 975  VFHPKK-GYMIVKCRGQQDIQDQLSLAKALQKEQAFFEN 1088
            +F  K  GY  V   G+ +  + +   +  + E+ FF+N
Sbjct: 508  LFPMKALGYFAV-VTGKGNSSESIEAIR--EYEEEFFQN 543


>ref|NP_598513.1| dynamin-like 120 kDa protein, mitochondrial isoform 2 precursor [Mus
            musculus].
          Length = 960

 Score = 94.4 bits (233), Expect = 4e-19
 Identities = 80/279 (28%), Positives = 127/279 (45%), Gaps = 5/279 (1%)
 Frame = +3

Query: 267  HKTGPENNLYSQYEEKVRPCIDLIDSLRALGVEQDLALPAIAVIGDQSSGKSSVLEALSG 446
            H    + +L   Y E     +D++    A    QD  LP + V+GDQS+GK+SVLE ++ 
Sbjct: 256  HHRKLKKSLIDMYSE----VLDVLSDYDASYNTQD-HLPRVVVVGDQSAGKTSVLEMIAQ 310

Query: 447  VAL-PRGSG-IVTRCPXXXXXXXXXNEEDEWKGKVSYRDSEIELSDASQVEKEVSAAQIA 620
              + PRGSG ++TR P         +    +K      D   E  D + +  E+      
Sbjct: 311  ARIFPRGSGEMMTRSPVKVTLSEGPHHVALFKDSSREFDLTKE-EDLAALRHEIELRMRK 369

Query: 621  IAGEGVGISHELISLEVSSPHVPDLTLIDLPGITRVAVGNQPYDIEYQIKSLIKKYICKQ 800
               EG  +S E ISL V  P +  + L+DLPG+          D +  I S+ K Y+   
Sbjct: 370  NVKEGCTVSPETISLNVKGPGLQRMVLVDLPGVINTVTSGMAPDTKETIFSISKAYMQNP 429

Query: 801  ETINLVVVPCNVDIATTEALRMAQEVDPEGDRTIGILTKPDLVDK--GTEDKIVDVARNL 974
              I L +   +VD   +    +  ++DP G RTI +LTK DL +K   +  +I  +    
Sbjct: 430  NAIILCIQDGSVDAERSIVTDLVSQMDPHGRRTIFVLTKVDLAEKNVASPSRIQQIIEGK 489

Query: 975  VFHPKK-GYMIVKCRGQQDIQDQLSLAKALQKEQAFFEN 1088
            +F  K  GY  V   G+ +  + +   +  + E+ FF+N
Sbjct: 490  LFPMKALGYFAV-VTGKGNSSESIEAIR--EYEEEFFQN 525


  Database: RefSeq49_MP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 15,617,559
  Number of sequences in database:  30,036
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 71,064,861
Number of extensions: 1678289
Number of successful extensions: 5987
Number of sequences better than 1.0e-05: 10
Number of HSP's gapped: 5936
Number of HSP's successfully gapped: 11
Length of query: 828
Length of database: 15,617,559
Length adjustment: 110
Effective length of query: 718
Effective length of database: 12,313,599
Effective search space: 8841164082
Effective search space used: 8841164082
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

Search to RefSeqSP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-000493
         (2486 letters)

Database: RefSeq49_SP.fasta 
           24,897 sequences; 11,343,932 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_999226.1| interferon-induced GTP-binding protein Mx1 [Sus...  1183   0.0  
Alignment   gi|NP_001090885.1| interferon-induced GTP-binding protein Mx2 [...   442   e-124
Alignment   gi|XP_003122242.1| PREDICTED: dynamin-1 [Sus scrofa].                236   4e-62
Alignment   gi|XP_001928135.1| PREDICTED: dynamin-1 isoform 1 [Sus scrofa].      236   4e-62
Alignment   gi|XP_003353723.1| PREDICTED: dynamin-1-like isoform 2 [Sus scr...   236   4e-62
Alignment   gi|XP_003353722.1| PREDICTED: dynamin-1-like isoform 1 [Sus scr...   236   4e-62
Alignment   gi|XP_003354114.1| PREDICTED: dynamin-2-like [Sus scrofa].           206   5e-53
Alignment   gi|XP_003132828.2| PREDICTED: interferon-induced GTP-binding pr...   173   4e-43
Alignment   gi|XP_003355574.1| PREDICTED: dynamin-1-like protein-like [Sus ...   154   2e-37
Alignment   gi|XP_003361037.1| PREDICTED: dynamin-1-like, partial [Sus scro...    59   2e-08

>ref|NP_999226.1| interferon-induced GTP-binding protein Mx1 [Sus scrofa].
          Length = 663

 Score = 1183 bits (3060), Expect = 0.0
 Identities = 606/656 (92%), Positives = 610/656 (92%)
 Frame = +3

Query: 171  MVYSNCESKEPDSVSASNHLLLNGNDELVEKSHKTGPENNLYSQYEEKVRPCIDLIDSLR 350
            MVYS+CESKEPDSVSASNHLLLNGNDELVEKSHKTGPENNLYSQYEEKVRPCIDLIDSLR
Sbjct: 1    MVYSSCESKEPDSVSASNHLLLNGNDELVEKSHKTGPENNLYSQYEEKVRPCIDLIDSLR 60

Query: 351  ALGVEQDLALPAIAVIGDQSSGKSSVLEALSGVALPRGSGIVTRCPXXXXXXXXXNEEDE 530
            ALGVEQDLALPAIAVIGDQSSGKSSVLEALSGVALPRGSGIVTRCP         NEEDE
Sbjct: 61   ALGVEQDLALPAIAVIGDQSSGKSSVLEALSGVALPRGSGIVTRCPLVLKLKKLVNEEDE 120

Query: 531  WKGKVSYRDSEIELSDASQVEKEVSAAQIAIAGEGVGISHELISLEVSSPHVPDLTLIDL 710
            WKGKVSYRDSEIELSDASQVEKEVSAAQIAIAGEGVGISHELISLEVSSPHVPDLTLIDL
Sbjct: 121  WKGKVSYRDSEIELSDASQVEKEVSAAQIAIAGEGVGISHELISLEVSSPHVPDLTLIDL 180

Query: 711  PGITRVAVGNQPYDIEYQIKSLIKKYICKQETINLVVVPCNVDIATTEALRMAQEVDPEG 890
            PGITRVAVGNQPYDIEYQIKSLIKKYICKQETINLVVVPCNVDIATTEALRMAQEVDPEG
Sbjct: 181  PGITRVAVGNQPYDIEYQIKSLIKKYICKQETINLVVVPCNVDIATTEALRMAQEVDPEG 240

Query: 891  DRTIGILTKPDLVDKGTEDKIVDVARNLVFHPKKGYMIVKCRGQQDIQDQLSLAKALQKE 1070
            DRTIGILTKPDLVDKGTEDKIVDVARNLVFH KKGYMIVKCRGQQDIQ+QLSLAKALQKE
Sbjct: 241  DRTIGILTKPDLVDKGTEDKIVDVARNLVFHLKKGYMIVKCRGQQDIQEQLSLAKALQKE 300

Query: 1071 QAFFENHAHFRDLLEEGRATIPCLAERLTSELIMHICKTLPLLENQIKESHQKITEELQK 1250
            QAFFENHAHFRDLLEEGRATIPCLAERLTSELIMHICKTLPLLENQIKESHQKITEELQK
Sbjct: 301  QAFFENHAHFRDLLEEGRATIPCLAERLTSELIMHICKTLPLLENQIKESHQKITEELQK 360

Query: 1251 YGSDIPEDESGKMFFLIDKIDAFNSDITALIQGEELVVEYECRLFTKMRNEFCKWSAVVE 1430
            YGSDIPEDESGKMFFLIDKIDAFNSDITALIQGEELVVEYECRLFTKMRNEFC+WSAVVE
Sbjct: 361  YGSDIPEDESGKMFFLIDKIDAFNSDITALIQGEELVVEYECRLFTKMRNEFCRWSAVVE 420

Query: 1431 KNFKNGYDAICKQIQLFENQYRGRELPGFVNYKTFETIIKKQVSVLEEPAVDMLHTVTDL 1610
            KNFKNGYDAICKQIQLFENQYRGRELPGFVNYKTFETIIKKQVSVLEEPAVDMLHTVTDL
Sbjct: 421  KNFKNGYDAICKQIQLFENQYRGRELPGFVNYKTFETIIKKQVSVLEEPAVDMLHTVTDL 480

Query: 1611 VRLAFTDVSETNFNEFFNLHRTAKSKIEDIKLEQEKEAETSIRLHFQMEQIVYCQDQVYR 1790
            VRLAFTDVSETNFNEFFNLHRTAKSKIEDIKLEQEKEAETSIRLHFQMEQIVYCQDQVYR
Sbjct: 481  VRLAFTDVSETNFNEFFNLHRTAKSKIEDIKLEQEKEAETSIRLHFQMEQIVYCQDQVYR 540

Query: 1791 GALQXXXXXXXXXXXXXXSNQYFLXXXXXXXXXXIAEIFQHLIAYHQEVGKRISSHIPLI 1970
            GALQ              SNQYFL          IAEIFQHLIAYHQEVGKRISSHIPLI
Sbjct: 541  GALQKVREKEAEEEKNRKSNQYFLSSPAPSSDPSIAEIFQHLIAYHQEVGKRISSHIPLI 600

Query: 1971 IQFFILRTFGXXXXXXXXXXXXNKDQYDWLLRERSDTSDKRKFLKERLMRLTQARQ 2138
            IQFFILRTFG            NKDQYDWLLRERSDTSDKRKFLKERLMRLTQAR+
Sbjct: 601  IQFFILRTFGQQLQKSMLQLLQNKDQYDWLLRERSDTSDKRKFLKERLMRLTQARR 656


>ref|NP_001090885.1| interferon-induced GTP-binding protein Mx2 [Sus scrofa].
          Length = 389

 Score =  442 bits (1137), Expect = e-124
 Identities = 228/301 (75%), Positives = 257/301 (85%)
 Frame = +3

Query: 276  GPENNLYSQYEEKVRPCIDLIDSLRALGVEQDLALPAIAVIGDQSSGKSSVLEALSGVAL 455
            GPENNLYS +EEKVRPCIDLIDSLRALGVEQDLALP IAVIGDQSSGKSSVLEALSGV L
Sbjct: 81   GPENNLYSPFEEKVRPCIDLIDSLRALGVEQDLALPTIAVIGDQSSGKSSVLEALSGVPL 140

Query: 456  PRGSGIVTRCPXXXXXXXXXNEEDEWKGKVSYRDSEIELSDASQVEKEVSAAQIAIAGEG 635
            PRGSGI+TRCP          +E  W+G++SYR  E++L D SQVE+E+  AQ AIAG G
Sbjct: 141  PRGSGIITRCPLALRLK---KKECPWQGRISYRKVELQLQDPSQVEREIRKAQDAIAGSG 197

Query: 636  VGISHELISLEVSSPHVPDLTLIDLPGITRVAVGNQPYDIEYQIKSLIKKYICKQETINL 815
            VGISHELISLEV+SP VPDLTLIDLPGITRVAVGNQP DI  QIK+LI+KYI +Q+TINL
Sbjct: 198  VGISHELISLEVTSPEVPDLTLIDLPGITRVAVGNQPQDIGLQIKALIRKYIQEQQTINL 257

Query: 816  VVVPCNVDIATTEALRMAQEVDPEGDRTIGILTKPDLVDKGTEDKIVDVARNLVFHPKKG 995
            VVVPCNVDIATTEALRMAQEVDPEGDRTIGILTKPDLVD G E  +++V +NL +H KKG
Sbjct: 258  VVVPCNVDIATTEALRMAQEVDPEGDRTIGILTKPDLVDTGAEKVVLNVMQNLTYHLKKG 317

Query: 996  YMIVKCRGQQDIQDQLSLAKALQKEQAFFENHAHFRDLLEEGRATIPCLAERLTSELIMH 1175
            YMIVKCRGQQ+I ++LSLA+A ++E AFF +H HFR LLEEG+AT+P LAERLT ELI H
Sbjct: 318  YMIVKCRGQQEILNKLSLAEATKREIAFFHSHPHFRILLEEGKATVPRLAERLTVELIGH 377

Query: 1176 I 1178
            I
Sbjct: 378  I 378


>ref|XP_003122242.1| PREDICTED: dynamin-1 [Sus scrofa].
          Length = 851

 Score =  236 bits (602), Expect = 4e-62
 Identities = 157/428 (36%), Positives = 233/428 (54%), Gaps = 8/428 (1%)
 Frame = +3

Query: 333  LIDSLRALGVEQDLALPAIAVIGDQSSGKSSVLEALSGVA-LPRGSGIVTRCPXXXXXXX 509
            L D+  A+G   DL LP IAV+G QS+GKSSVLE   G   LPRGSGIVTR P       
Sbjct: 16   LQDAFSAIGQNADLDLPQIAVVGGQSAGKSSVLENFVGRDFLPRGSGIVTRRPLVLQLVN 75

Query: 510  XXNEEDEW---KGKVSYRDSEIELSDASQVEKEVSAAQIAIAGEGVGISHELISLEVSSP 680
               E  E+   KGK        + +D  +V  E+ A    + G   GIS   I+L V SP
Sbjct: 76   ATTEYAEFLHCKGK--------KFTDFEEVRLEIEAETDRVTGTNKGISPVPINLRVYSP 127

Query: 681  HVPDLTLIDLPGITRVAVGNQPYDIEYQIKSLIKKYICKQETINLVVVPCNVDIATTEAL 860
            HV +LTL+DLPG+T+V VG+QP DIE+QI+ ++ +++ K+  + L V P N D+A ++AL
Sbjct: 128  HVLNLTLVDLPGMTKVPVGDQPPDIEFQIRDMLMQFVTKENCLILAVSPANSDLANSDAL 187

Query: 861  RMAQEVDPEGDRTIGILTKPDLVDKGTEDKIVDVARNLVFHPKKGYMIVKCRGQQDIQDQ 1040
            ++A+EVDP+G RTIG++TK DL+D+GT+ +  DV  N +   ++GY+ V  R Q+DI  +
Sbjct: 188  KVAKEVDPQGQRTIGVITKLDLMDEGTDAR--DVLENKLLPLRRGYIGVVNRSQKDIDGK 245

Query: 1041 LSLAKALQKEQAFFENHAHFRDLLEEGRATIPCLAERLTSELIMHICKTLPLLENQIKES 1220
              +  AL  E+ FF +H  +R L +  R   P L + L  +L  HI  TLP L N+++  
Sbjct: 246  KDITAALAAERKFFLSHPSYRHLAD--RMGTPYLQKVLNQQLTNHIRDTLPGLRNKLQSQ 303

Query: 1221 HQKITEELQKYGSDIPEDESGKMFFLIDKIDAFNSDITALIQGE-ELVVEYECRLFTKMR 1397
               I +E+++Y +  P+D + K   L+  +  F  D    I+G  + +  YE     ++ 
Sbjct: 304  LLSIEKEVEEYKNFRPDDPARKTKALLQMVQQFAVDFEKRIEGSGDQIDTYELSGGARIN 363

Query: 1398 NEFCKWSAVVEKNFKNGYDAICKQIQLFENQYRGRELPGFVNYKTFETIIKKQVSVLEEP 1577
              F +         +     + ++I        G     F     FETI+KKQV  + EP
Sbjct: 364  RIFHERFPFELVKMEFDEKELRREISYAIKNIHGIRTGLFTPDMAFETIVKKQVKKIREP 423

Query: 1578 ---AVDML 1592
                VDM+
Sbjct: 424  CLKCVDMV 431


>ref|XP_001928135.1| PREDICTED: dynamin-1 isoform 1 [Sus scrofa].
          Length = 864

 Score =  236 bits (602), Expect = 4e-62
 Identities = 157/428 (36%), Positives = 233/428 (54%), Gaps = 8/428 (1%)
 Frame = +3

Query: 333  LIDSLRALGVEQDLALPAIAVIGDQSSGKSSVLEALSGVA-LPRGSGIVTRCPXXXXXXX 509
            L D+  A+G   DL LP IAV+G QS+GKSSVLE   G   LPRGSGIVTR P       
Sbjct: 16   LQDAFSAIGQNADLDLPQIAVVGGQSAGKSSVLENFVGRDFLPRGSGIVTRRPLVLQLVN 75

Query: 510  XXNEEDEW---KGKVSYRDSEIELSDASQVEKEVSAAQIAIAGEGVGISHELISLEVSSP 680
               E  E+   KGK        + +D  +V  E+ A    + G   GIS   I+L V SP
Sbjct: 76   ATTEYAEFLHCKGK--------KFTDFEEVRLEIEAETDRVTGTNKGISPVPINLRVYSP 127

Query: 681  HVPDLTLIDLPGITRVAVGNQPYDIEYQIKSLIKKYICKQETINLVVVPCNVDIATTEAL 860
            HV +LTL+DLPG+T+V VG+QP DIE+QI+ ++ +++ K+  + L V P N D+A ++AL
Sbjct: 128  HVLNLTLVDLPGMTKVPVGDQPPDIEFQIRDMLMQFVTKENCLILAVSPANSDLANSDAL 187

Query: 861  RMAQEVDPEGDRTIGILTKPDLVDKGTEDKIVDVARNLVFHPKKGYMIVKCRGQQDIQDQ 1040
            ++A+EVDP+G RTIG++TK DL+D+GT+ +  DV  N +   ++GY+ V  R Q+DI  +
Sbjct: 188  KVAKEVDPQGQRTIGVITKLDLMDEGTDAR--DVLENKLLPLRRGYIGVVNRSQKDIDGK 245

Query: 1041 LSLAKALQKEQAFFENHAHFRDLLEEGRATIPCLAERLTSELIMHICKTLPLLENQIKES 1220
              +  AL  E+ FF +H  +R L +  R   P L + L  +L  HI  TLP L N+++  
Sbjct: 246  KDITAALAAERKFFLSHPSYRHLAD--RMGTPYLQKVLNQQLTNHIRDTLPGLRNKLQSQ 303

Query: 1221 HQKITEELQKYGSDIPEDESGKMFFLIDKIDAFNSDITALIQGE-ELVVEYECRLFTKMR 1397
               I +E+++Y +  P+D + K   L+  +  F  D    I+G  + +  YE     ++ 
Sbjct: 304  LLSIEKEVEEYKNFRPDDPARKTKALLQMVQQFAVDFEKRIEGSGDQIDTYELSGGARIN 363

Query: 1398 NEFCKWSAVVEKNFKNGYDAICKQIQLFENQYRGRELPGFVNYKTFETIIKKQVSVLEEP 1577
              F +         +     + ++I        G     F     FETI+KKQV  + EP
Sbjct: 364  RIFHERFPFELVKMEFDEKELRREISYAIKNIHGIRTGLFTPDMAFETIVKKQVKKIREP 423

Query: 1578 ---AVDML 1592
                VDM+
Sbjct: 424  CLKCVDMV 431


>ref|XP_003353723.1| PREDICTED: dynamin-1-like isoform 2 [Sus scrofa].
          Length = 851

 Score =  236 bits (602), Expect = 4e-62
 Identities = 157/428 (36%), Positives = 233/428 (54%), Gaps = 8/428 (1%)
 Frame = +3

Query: 333  LIDSLRALGVEQDLALPAIAVIGDQSSGKSSVLEALSGVA-LPRGSGIVTRCPXXXXXXX 509
            L D+  A+G   DL LP IAV+G QS+GKSSVLE   G   LPRGSGIVTR P       
Sbjct: 16   LQDAFSAIGQNADLDLPQIAVVGGQSAGKSSVLENFVGRDFLPRGSGIVTRRPLVLQLVN 75

Query: 510  XXNEEDEW---KGKVSYRDSEIELSDASQVEKEVSAAQIAIAGEGVGISHELISLEVSSP 680
               E  E+   KGK        + +D  +V  E+ A    + G   GIS   I+L V SP
Sbjct: 76   ATTEYAEFLHCKGK--------KFTDFEEVRLEIEAETDRVTGTNKGISPVPINLRVYSP 127

Query: 681  HVPDLTLIDLPGITRVAVGNQPYDIEYQIKSLIKKYICKQETINLVVVPCNVDIATTEAL 860
            HV +LTL+DLPG+T+V VG+QP DIE+QI+ ++ +++ K+  + L V P N D+A ++AL
Sbjct: 128  HVLNLTLVDLPGMTKVPVGDQPPDIEFQIRDMLMQFVTKENCLILAVSPANSDLANSDAL 187

Query: 861  RMAQEVDPEGDRTIGILTKPDLVDKGTEDKIVDVARNLVFHPKKGYMIVKCRGQQDIQDQ 1040
            ++A+EVDP+G RTIG++TK DL+D+GT+ +  DV  N +   ++GY+ V  R Q+DI  +
Sbjct: 188  KVAKEVDPQGQRTIGVITKLDLMDEGTDAR--DVLENKLLPLRRGYIGVVNRSQKDIDGK 245

Query: 1041 LSLAKALQKEQAFFENHAHFRDLLEEGRATIPCLAERLTSELIMHICKTLPLLENQIKES 1220
              +  AL  E+ FF +H  +R L +  R   P L + L  +L  HI  TLP L N+++  
Sbjct: 246  KDITAALAAERKFFLSHPSYRHLAD--RMGTPYLQKVLNQQLTNHIRDTLPGLRNKLQSQ 303

Query: 1221 HQKITEELQKYGSDIPEDESGKMFFLIDKIDAFNSDITALIQGE-ELVVEYECRLFTKMR 1397
               I +E+++Y +  P+D + K   L+  +  F  D    I+G  + +  YE     ++ 
Sbjct: 304  LLSIEKEVEEYKNFRPDDPARKTKALLQMVQQFAVDFEKRIEGSGDQIDTYELSGGARIN 363

Query: 1398 NEFCKWSAVVEKNFKNGYDAICKQIQLFENQYRGRELPGFVNYKTFETIIKKQVSVLEEP 1577
              F +         +     + ++I        G     F     FETI+KKQV  + EP
Sbjct: 364  RIFHERFPFELVKMEFDEKELRREISYAIKNIHGIRTGLFTPDMAFETIVKKQVKKIREP 423

Query: 1578 ---AVDML 1592
                VDM+
Sbjct: 424  CLKCVDMV 431


>ref|XP_003353722.1| PREDICTED: dynamin-1-like isoform 1 [Sus scrofa].
          Length = 864

 Score =  236 bits (602), Expect = 4e-62
 Identities = 157/428 (36%), Positives = 233/428 (54%), Gaps = 8/428 (1%)
 Frame = +3

Query: 333  LIDSLRALGVEQDLALPAIAVIGDQSSGKSSVLEALSGVA-LPRGSGIVTRCPXXXXXXX 509
            L D+  A+G   DL LP IAV+G QS+GKSSVLE   G   LPRGSGIVTR P       
Sbjct: 16   LQDAFSAIGQNADLDLPQIAVVGGQSAGKSSVLENFVGRDFLPRGSGIVTRRPLVLQLVN 75

Query: 510  XXNEEDEW---KGKVSYRDSEIELSDASQVEKEVSAAQIAIAGEGVGISHELISLEVSSP 680
               E  E+   KGK        + +D  +V  E+ A    + G   GIS   I+L V SP
Sbjct: 76   ATTEYAEFLHCKGK--------KFTDFEEVRLEIEAETDRVTGTNKGISPVPINLRVYSP 127

Query: 681  HVPDLTLIDLPGITRVAVGNQPYDIEYQIKSLIKKYICKQETINLVVVPCNVDIATTEAL 860
            HV +LTL+DLPG+T+V VG+QP DIE+QI+ ++ +++ K+  + L V P N D+A ++AL
Sbjct: 128  HVLNLTLVDLPGMTKVPVGDQPPDIEFQIRDMLMQFVTKENCLILAVSPANSDLANSDAL 187

Query: 861  RMAQEVDPEGDRTIGILTKPDLVDKGTEDKIVDVARNLVFHPKKGYMIVKCRGQQDIQDQ 1040
            ++A+EVDP+G RTIG++TK DL+D+GT+ +  DV  N +   ++GY+ V  R Q+DI  +
Sbjct: 188  KVAKEVDPQGQRTIGVITKLDLMDEGTDAR--DVLENKLLPLRRGYIGVVNRSQKDIDGK 245

Query: 1041 LSLAKALQKEQAFFENHAHFRDLLEEGRATIPCLAERLTSELIMHICKTLPLLENQIKES 1220
              +  AL  E+ FF +H  +R L +  R   P L + L  +L  HI  TLP L N+++  
Sbjct: 246  KDITAALAAERKFFLSHPSYRHLAD--RMGTPYLQKVLNQQLTNHIRDTLPGLRNKLQSQ 303

Query: 1221 HQKITEELQKYGSDIPEDESGKMFFLIDKIDAFNSDITALIQGE-ELVVEYECRLFTKMR 1397
               I +E+++Y +  P+D + K   L+  +  F  D    I+G  + +  YE     ++ 
Sbjct: 304  LLSIEKEVEEYKNFRPDDPARKTKALLQMVQQFAVDFEKRIEGSGDQIDTYELSGGARIN 363

Query: 1398 NEFCKWSAVVEKNFKNGYDAICKQIQLFENQYRGRELPGFVNYKTFETIIKKQVSVLEEP 1577
              F +         +     + ++I        G     F     FETI+KKQV  + EP
Sbjct: 364  RIFHERFPFELVKMEFDEKELRREISYAIKNIHGIRTGLFTPDMAFETIVKKQVKKIREP 423

Query: 1578 ---AVDML 1592
                VDM+
Sbjct: 424  CLKCVDMV 431


>ref|XP_003354114.1| PREDICTED: dynamin-2-like [Sus scrofa].
          Length = 841

 Score =  206 bits (524), Expect = 5e-53
 Identities = 141/441 (31%), Positives = 230/441 (52%), Gaps = 5/441 (1%)
 Frame = +3

Query: 453  LPRGSGIVTRCPXXXXXXXXXNEEDEWKGKVSYRDSEIELSDASQVEKEVSAAQIAIAGE 632
            LPRGSGIVTR P          E  E+    S + ++ E     +V +E+ A    + G 
Sbjct: 27   LPRGSGIVTRRPLILQLIFSKTEYAEFLHCKSKKFTDFE-----EVRQEIEAETDRVTGT 81

Query: 633  GVGISHELISLEVSSPHVPDLTLIDLPGITRVAVGNQPYDIEYQIKSLIKKYICKQETIN 812
              GIS   I+L V SPHV +LTLIDLPGIT+V VG+QP DIEYQIK +I ++I ++ ++ 
Sbjct: 82   NKGISPVPINLRVYSPHVLNLTLIDLPGITKVPVGDQPPDIEYQIKDMILQFISRESSLI 141

Query: 813  LVVVPCNVDIATTEALRMAQEVDPEGDRTIGILTKPDLVDKGTEDKIVDVARNLVFHPKK 992
            L V P N+D+A ++AL++A+EVDP+G RTIG++TK DL+D+GT+ +  DV  N +   ++
Sbjct: 142  LAVTPANMDLANSDALKLAKEVDPQGLRTIGVITKLDLMDEGTDAR--DVLENKLLPLRR 199

Query: 993  GYMIVKCRGQQDIQDQLSLAKALQKEQAFFENHAHFRDLLEEGRATIPCLAERLTSELIM 1172
            GY+ V  R Q+DI+ +  +  AL  E+ FF +H  +R + +  R   P L + L  +L  
Sbjct: 200  GYIGVVNRSQKDIEGKKDIRAALAAERKFFLSHPAYRHMAD--RMGTPHLQKTLNQQLTN 257

Query: 1173 HICKTLPLLENQIKESHQKITEELQKYGSDIPEDESGKMFFLIDKIDAFNSDITALIQG- 1349
            HI ++LP L ++++     + +E+++Y +  P+D + K   L+  +  F  D    I+G 
Sbjct: 258  HIRESLPALRSKLQSQLLSLEKEVEEYKNFRPDDPTRKTKALLQMVQQFGVDFEKRIEGS 317

Query: 1350 ----EELVVEYECRLFTKMRNEFCKWSAVVEKNFKNGYDAICKQIQLFENQYRGRELPGF 1517
                + L +    R+       F      +E + K+    + ++I        G     F
Sbjct: 318  GDQVDTLELSGGARINRIFHERFPFELVKMEFDEKD----LRREISYAIKNIHGVRTGLF 373

Query: 1518 VNYKTFETIIKKQVSVLEEPAVDMLHTVTDLVRLAFTDVSETNFNEFFNLHRTAKSKIED 1697
                 FE I+KKQ+  L+EP++  +  V   +       +E   + +  L    +  +  
Sbjct: 374  TPDMAFEAIVKKQIVKLKEPSLKCVDLVVSELATVIKKCAE-KLSSYPRLREETERIVTT 432

Query: 1698 IKLEQEKEAETSIRLHFQMEQ 1760
               E+E   +  I L   +EQ
Sbjct: 433  YIREREGRTKDQILLLIDIEQ 453


>ref|XP_003132828.2| PREDICTED: interferon-induced GTP-binding protein Mx2-like [Sus
            scrofa].
          Length = 156

 Score =  173 bits (439), Expect = 4e-43
 Identities = 88/100 (88%), Positives = 88/100 (88%)
 Frame = +3

Query: 1929 QEVGKRISSHIPLIIQFFILRTFGXXXXXXXXXXXXNKDQYDWLLRERSDTSDKRKFLKE 2108
            QEVGKRISSHIPLIIQFFILRTFG            NKDQYDWLLRERSDTSDKRKFLKE
Sbjct: 57   QEVGKRISSHIPLIIQFFILRTFGQQLQKSMLQLLQNKDQYDWLLRERSDTSDKRKFLKE 116

Query: 2109 RLMRLTQARQVPRLNRALQAARGLQGTSPGNEDQPPSLTD 2228
            RLMRLTQARQVPRLNRALQAARGLQGTSPGNEDQPPSLTD
Sbjct: 117  RLMRLTQARQVPRLNRALQAARGLQGTSPGNEDQPPSLTD 156


>ref|XP_003355574.1| PREDICTED: dynamin-1-like protein-like [Sus scrofa].
          Length = 862

 Score =  154 bits (389), Expect = 2e-37
 Identities = 123/392 (31%), Positives = 197/392 (50%), Gaps = 8/392 (2%)
 Frame = +3

Query: 519  EEDEWKGKVSYRDSEIELSDASQVEKEVSAAQIAIAGEGVGISHELISLEVSSPHVPDLT 698
            E +EW GK  +  +++  +D  ++ +E+      I+G   G+S E I L++ SP+V +LT
Sbjct: 84   EAEEW-GKFLHTKNKL-YTDFDEIRQEIENETERISGNNKGVSPEPIHLKIFSPNVVNLT 141

Query: 699  LIDLPGITRVAVGNQPYDIEYQIKSLIKKYICKQETINLVVVPCNVDIATTEALRMAQEV 878
            L+DLPG+T+V VG+QP DIE QI+ LI ++I    +I L V   N D+AT+EAL++++EV
Sbjct: 142  LVDLPGMTKVPVGDQPKDIELQIRELILRFISNPNSIILAVTAANTDMATSEALKISREV 201

Query: 879  DPEGDRTIGILTKPDLVDKGTEDKIVDVARNLVFHPKKGYMIVKCRGQQDIQDQLSLAKA 1058
            DP+G RT+ ++TK DL+D GT+   +DV    V   K G + V  R Q DI ++ S+  +
Sbjct: 202  DPDGRRTLAVITKLDLMDAGTD--AMDVLMGRVIPVKLGIIGVVNRSQLDINNKKSVTDS 259

Query: 1059 LQKEQAFFENHAHFRDLLEEGRATIPCLAERLTSELIMHICKTLPLLENQIKESHQKITE 1238
            ++ E AF +    +  L    R     LA  L   L+ HI   LP L+ +I     +   
Sbjct: 260  IRDEYAFLQK--KYPSL--ANRNGTKYLARTLNRLLMHHIRDCLPELKTRINVLAAQYQS 315

Query: 1239 ELQKYGSDIPEDESGKMFFLIDKIDAFNSDITALIQGEELVVEYE-----CRLFTKMRNE 1403
             L  YG  + +D+S  +  LI K   F ++    I+G    +E        R+       
Sbjct: 316  LLNSYGEPV-DDKSATLLQLITK---FATEYCNTIEGTAKYIETSELCGGARICYIFHET 371

Query: 1404 FCKWSAVVEKNFKNGYDAICKQIQLFENQYRGRELPGFVNYKTFETIIKKQVSVLEEPA- 1580
            F +    V+     G + I   I        G     FV   +FE ++K+Q+  LEEP+ 
Sbjct: 372  FGRTLESVDP--LGGLNTI--DILTAIRNATGPRPALFVPEVSFELLVKRQIKRLEEPSL 427

Query: 1581 --VDMLHTVTDLVRLAFTDVSETNFNEFFNLH 1670
              V+++H     +    ++ S      F  LH
Sbjct: 428  RCVELVHEEMQRIIQHCSNYSTQELLRFPKLH 459


>ref|XP_003361037.1| PREDICTED: dynamin-1-like, partial [Sus scrofa].
          Length = 648

 Score = 58.5 bits (140), Expect = 2e-08
 Identities = 51/217 (23%), Positives = 89/217 (41%), Gaps = 1/217 (0%)
 Frame = +3

Query: 993  GYMIVKCRGQQDIQDQLSLAKALQKEQAFFENHAHFRDLLEEGRATIPCLAERLTSELIM 1172
            GY+ V  R Q+DI  +  +  AL  E+ FF +H  +R L +  R   P L + L  +L  
Sbjct: 2    GYIGVVNRSQKDIDGKKDITAALAAERKFFLSHPSYRHLAD--RMGTPYLQKVLNQQLTN 59

Query: 1173 HICKTLPLLENQIKESHQKITEELQKYGSDIPEDESGKMFFLIDKIDAFNSDITALIQGE 1352
                    L N+++     I +E+++Y +  P+D + K   L+  +  F  D    I+G 
Sbjct: 60   XXXXXXXXLRNKLQSQLLSIEKEVEEYKNFRPDDPARKTKALLQMVQQFAVDFEKRIEGS 119

Query: 1353 -ELVVEYECRLFTKMRNEFCKWSAVVEKNFKNGYDAICKQIQLFENQYRGRELPGFVNYK 1529
             + +  YE     ++   F +         +     + ++I        G     F    
Sbjct: 120  GDQIDTYELSGGARINRIFHERFPFELVKMEFDEKELRREISYAIKNIHGIRXGLFTPDL 179

Query: 1530 TFETIIKKQVSVLEEPAVDMLHTVTDLVRLAFTDVSE 1640
             FE  +KKQV  L+EP++  +  V   +       SE
Sbjct: 180  AFEATVKKQVQKLKEPSIKCVDMVVSELTATIRKCSE 216


  Database: RefSeq49_SP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 11,343,932
  Number of sequences in database:  24,897
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 52,797,643
Number of extensions: 1269563
Number of successful extensions: 4638
Number of sequences better than 1.0e-05: 10
Number of HSP's gapped: 4611
Number of HSP's successfully gapped: 10
Length of query: 828
Length of database: 11,343,932
Length adjustment: 107
Effective length of query: 721
Effective length of database: 8,679,953
Effective search space: 6258246113
Effective search space used: 6258246113
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

Search to Sscrofa10_2

BLASTN 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-000493
         (2486 letters)

Database: Sscrofa_10.2.fasta 
           4582 sequences; 2,808,509,378 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Sscrofa_Chr13                                                         906   0.0  

>Sscrofa_Chr13 
||          Length = 218635234

 Score =  906 bits (457), Expect = 0.0
 Identities = 457/457 (100%)
 Strand = Plus / Minus

                                                                             
Query: 1929      caggaggtcggcaagcgcatctccagccacatccctctgatcatccagttcttcatcctc 1988
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214989559 caggaggtcggcaagcgcatctccagccacatccctctgatcatccagttcttcatcctc 214989500

                                                                             
Query: 1989      cggacctttgggcagcagctgcagaagagcatgctgcagctgctgcagaacaaggaccaa 2048
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214989499 cggacctttgggcagcagctgcagaagagcatgctgcagctgctgcagaacaaggaccaa 214989440

                                                                             
Query: 2049      tacgactggctcctgagggagcgcagtgacaccagcgacaagaggaagttcctgaaggag 2108
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214989439 tacgactggctcctgagggagcgcagtgacaccagcgacaagaggaagttcctgaaggag 214989380

                                                                             
Query: 2109      cggctgatgcggctgacccaggctcgccaagttcccaggctgaaccgggctctccaggcg 2168
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214989379 cggctgatgcggctgacccaggctcgccaagttcccaggctgaaccgggctctccaggcg 214989320

                                                                             
Query: 2169      gcccggggtctccagggcacgtctccaggcaacgaggaccaacctccttccctaacagac 2228
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214989319 gcccggggtctccagggcacgtctccaggcaacgaggaccaacctccttccctaacagac 214989260

                                                                             
Query: 2229      tagcatcatgagctcctgtttcgcacatcctcctgtggttagtagactctaaagccaccg 2288
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214989259 tagcatcatgagctcctgtttcgcacatcctcctgtggttagtagactctaaagccaccg 214989200

                                                                             
Query: 2289      tccctgctgttagtggctgaggacttagcaagaagctgtgataagcacgctggctgcaag 2348
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214989199 tccctgctgttagtggctgaggacttagcaagaagctgtgataagcacgctggctgcaag 214989140

                                                      
Query: 2349      catcaggccatttacttgaatgagccccgccaacgct 2385
                 |||||||||||||||||||||||||||||||||||||
Sbjct: 214989139 catcaggccatttacttgaatgagccccgccaacgct 214989103



 Score =  906 bits (457), Expect = 0.0
 Identities = 457/457 (100%)
 Strand = Plus / Plus

                                                                             
Query: 1929      caggaggtcggcaagcgcatctccagccacatccctctgatcatccagttcttcatcctc 1988
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215346767 caggaggtcggcaagcgcatctccagccacatccctctgatcatccagttcttcatcctc 215346826

                                                                             
Query: 1989      cggacctttgggcagcagctgcagaagagcatgctgcagctgctgcagaacaaggaccaa 2048
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215346827 cggacctttgggcagcagctgcagaagagcatgctgcagctgctgcagaacaaggaccaa 215346886

                                                                             
Query: 2049      tacgactggctcctgagggagcgcagtgacaccagcgacaagaggaagttcctgaaggag 2108
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215346887 tacgactggctcctgagggagcgcagtgacaccagcgacaagaggaagttcctgaaggag 215346946

                                                                             
Query: 2109      cggctgatgcggctgacccaggctcgccaagttcccaggctgaaccgggctctccaggcg 2168
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215346947 cggctgatgcggctgacccaggctcgccaagttcccaggctgaaccgggctctccaggcg 215347006

                                                                             
Query: 2169      gcccggggtctccagggcacgtctccaggcaacgaggaccaacctccttccctaacagac 2228
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215347007 gcccggggtctccagggcacgtctccaggcaacgaggaccaacctccttccctaacagac 215347066

                                                                             
Query: 2229      tagcatcatgagctcctgtttcgcacatcctcctgtggttagtagactctaaagccaccg 2288
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215347067 tagcatcatgagctcctgtttcgcacatcctcctgtggttagtagactctaaagccaccg 215347126

                                                                             
Query: 2289      tccctgctgttagtggctgaggacttagcaagaagctgtgataagcacgctggctgcaag 2348
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215347127 tccctgctgttagtggctgaggacttagcaagaagctgtgataagcacgctggctgcaag 215347186

                                                      
Query: 2349      catcaggccatttacttgaatgagccccgccaacgct 2385
                 |||||||||||||||||||||||||||||||||||||
Sbjct: 215347187 catcaggccatttacttgaatgagccccgccaacgct 215347223



 Score =  500 bits (252), Expect = e-138
 Identities = 252/252 (100%)
 Strand = Plus / Minus

                                                                             
Query: 1681      agtccaaaattgaagacattaaattagaacaagaaaaagaagctgagacgtcgatccggc 1740
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214992731 agtccaaaattgaagacattaaattagaacaagaaaaagaagctgagacgtcgatccggc 214992672

                                                                             
Query: 1741      tccacttccaaatggagcagatcgtgtactgccaggaccaggtctatcggggcgcgctgc 1800
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214992671 tccacttccaaatggagcagatcgtgtactgccaggaccaggtctatcggggcgcgctgc 214992612

                                                                             
Query: 1801      agaaggtcagagagaaggaggcggaagaagaaaagaacagaaaatcaaaccagtactttc 1860
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214992611 agaaggtcagagagaaggaggcggaagaagaaaagaacagaaaatcaaaccagtactttc 214992552

                                                                             
Query: 1861      tgtcgtcgccggccccctcctcagacccctccatagccgagatctttcagcacctgattg 1920
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214992551 tgtcgtcgccggccccctcctcagacccctccatagccgagatctttcagcacctgattg 214992492

                             
Query: 1921      cctaccatcagg 1932
                 ||||||||||||
Sbjct: 214992491 cctaccatcagg 214992480



 Score =  385 bits (194), Expect = e-104
 Identities = 194/194 (100%)
 Strand = Plus / Minus

                                                                             
Query: 276       gggcctgagaacaacctgtacagccagtacgaggagaaagtgcggccctgcatcgacctc 335
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215009273 gggcctgagaacaacctgtacagccagtacgaggagaaagtgcggccctgcatcgacctc 215009214

                                                                             
Query: 336       atcgactcactgcgggccctgggcgtggagcaggacctggccctgcccgccatcgccgtc 395
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215009213 atcgactcactgcgggccctgggcgtggagcaggacctggccctgcccgccatcgccgtc 215009154

                                                                             
Query: 396       atcggggaccagagttcgggcaagagctccgtgctggaggccctgtcaggggtcgctctc 455
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215009153 atcggggaccagagttcgggcaagagctccgtgctggaggccctgtcaggggtcgctctc 215009094

                               
Query: 456       cccagaggcagcgg 469
                 ||||||||||||||
Sbjct: 215009093 cccagaggcagcgg 215009080



 Score =  383 bits (193), Expect = e-103
 Identities = 199/201 (99%)
 Strand = Plus / Minus

                                                                             
Query: 903       gggatcttgacgaagccggatctggtggacaaaggcactgaggacaagatagtggacgtg 962
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215001275 gggatcttgacgaagccggatctggtggacaaaggcactgaggacaagatagtggacgtg 215001216

                                                                             
Query: 963       gcgagaaacctggtcttccacccgaagaagggctacatgattgtcaagtgcaggggccag 1022
                 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 215001215 gcgagaaacctggtcttccacctgaagaagggctacatgattgtcaagtgcaggggccag 215001156

                                                                             
Query: 1023      caggacatccaggaccagctgagcctggccaaggccctgcagaaggagcaggccttcttt 1082
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215001155 caggacatccaggaccagctgagcctggccaaggccctgcagaaggagcaggccttcttt 215001096

                                      
Query: 1083      gaaaaccacgcacatttcagg 1103
                 |||||||||| ||||||||||
Sbjct: 215001095 gaaaaccacgaacatttcagg 215001075



 Score =  317 bits (160), Expect = 2e-83
 Identities = 160/160 (100%)
 Strand = Plus / Minus

                                                                             
Query: 1446      ggttatgacgccatatgtaaacaaatccagctcttcgaaaatcagtaccgggggagagag 1505
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214995979 ggttatgacgccatatgtaaacaaatccagctcttcgaaaatcagtaccgggggagagag 214995920

                                                                             
Query: 1506      ttgccagggtttgtgaattataagacatttgaaaccatcattaagaagcaggtcagtgtc 1565
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214995919 ttgccagggtttgtgaattataagacatttgaaaccatcattaagaagcaggtcagtgtc 214995860

                                                         
Query: 1566      ctggaagagccagccgtggacatgctgcacacagtgactg 1605
                 ||||||||||||||||||||||||||||||||||||||||
Sbjct: 214995859 ctggaagagccagccgtggacatgctgcacacagtgactg 214995820



 Score =  311 bits (157), Expect = 1e-81
 Identities = 157/157 (100%)
 Strand = Plus / Minus

                                                                             
Query: 608       agcccagattgccatcgctggggaaggcgtgggaatcagtcatgagctaatcagtctgga 667
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215005783 agcccagattgccatcgctggggaaggcgtgggaatcagtcatgagctaatcagtctgga 215005724

                                                                             
Query: 668       ggtcagctcccctcacgtcccagatctgaccctcatagaccttcctggcatcaccagggt 727
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215005723 ggtcagctcccctcacgtcccagatctgaccctcatagaccttcctggcatcaccagggt 215005664

                                                      
Query: 728       agctgtaggcaatcagccatacgacatcgaataccag 764
                 |||||||||||||||||||||||||||||||||||||
Sbjct: 215005663 agctgtaggcaatcagccatacgacatcgaataccag 215005627



 Score =  287 bits (145), Expect = 1e-74
 Identities = 166/173 (95%)
 Strand = Plus / Minus

                                                                             
Query: 276       gggcctgagaacaacctgtacagccagtacgaggagaaagtgcggccctgcatcgacctc 335
                 ||||| ||||||||||||||||||| || ||||||||| |||||||||||||||||||||
Sbjct: 215051508 gggcccgagaacaacctgtacagcccgttcgaggagaaggtgcggccctgcatcgacctc 215051449

                                                                             
Query: 336       atcgactcactgcgggccctgggcgtggagcaggacctggccctgcccgccatcgccgtc 395
                 |||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 215051448 atcgactcgctgcgggccctgggcgtggagcaggacctggccctgcccaccatcgccgtc 215051389

                                                                      
Query: 396       atcggggaccagagttcgggcaagagctccgtgctggaggccctgtcaggggt 448
                 ||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 215051388 atcggggaccagagttcgggcaagagctccgtgctggaggccctgtcgggggt 215051336



 Score =  285 bits (144), Expect = 6e-74
 Identities = 144/144 (100%)
 Strand = Plus / Minus

                                                                             
Query: 1305      aaaatcgatgcatttaatagtgatatcactgctttgatacaaggagaggaactggtggtg 1364
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214996503 aaaatcgatgcatttaatagtgatatcactgctttgatacaaggagaggaactggtggtg 214996444

                                                                             
Query: 1365      gagtacgagtgtcggctgtttaccaagatgcgaaatgagttctgcaaatggagtgctgtg 1424
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214996443 gagtacgagtgtcggctgtttaccaagatgcgaaatgagttctgcaaatggagtgctgtg 214996384

                                         
Query: 1425      gttgaaaagaatttcaaaaatggt 1448
                 ||||||||||||||||||||||||
Sbjct: 214996383 gttgaaaagaatttcaaaaatggt 214996360



 Score =  283 bits (143), Expect = 2e-73
 Identities = 143/143 (100%)
 Strand = Plus / Minus

                                                                             
Query: 762       cagatcaagtctctgatcaagaagtacatctgtaagcaggagaccatcaacttggtggtg 821
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215004663 cagatcaagtctctgatcaagaagtacatctgtaagcaggagaccatcaacttggtggtg 215004604

                                                                             
Query: 822       gtcccctgcaacgtggacattgccaccacggaggcgctgcgcatggcccaggaggtggac 881
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215004603 gtcccctgcaacgtggacattgccaccacggaggcgctgcgcatggcccaggaggtggac 215004544

                                        
Query: 882       cccgaaggagacaggaccatcgg 904
                 |||||||||||||||||||||||
Sbjct: 215004543 cccgaaggagacaggaccatcgg 215004521



 Score =  281 bits (142), Expect = 9e-73
 Identities = 142/142 (100%)
 Strand = Plus / Minus

                                                                             
Query: 468       ggaattgtgacaagatgccctcttgtgctgaaattgaaaaaactcgtgaacgaagaagac 527
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215007463 ggaattgtgacaagatgccctcttgtgctgaaattgaaaaaactcgtgaacgaagaagac 215007404

                                                                             
Query: 528       gaatggaagggcaaagtcagttaccgggacagcgagattgagctttcagatgcttcgcag 587
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215007403 gaatggaagggcaaagtcagttaccgggacagcgagattgagctttcagatgcttcgcag 215007344

                                       
Query: 588       gtggaaaaggaagtcagcgcag 609
                 ||||||||||||||||||||||
Sbjct: 215007343 gtggaaaaggaagtcagcgcag 215007322



 Score =  256 bits (129), Expect = 5e-65
 Identities = 129/129 (100%)
 Strand = Plus / Minus

                                                                             
Query: 148       agctgaactgatcaaggaagaagatggtttattccaactgtgaaagtaaagaacctgatt 207
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215010260 agctgaactgatcaaggaagaagatggtttattccaactgtgaaagtaaagaacctgatt 215010201

                                                                             
Query: 208       cagtttctgcatccaatcacctgttactaaatgggaatgatgaattggtggagaaaagtc 267
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215010200 cagtttctgcatccaatcacctgttactaaatgggaatgatgaattggtggagaaaagtc 215010141

                          
Query: 268       acaaaacag 276
                 |||||||||
Sbjct: 215010140 acaaaacag 215010132



 Score =  244 bits (123), Expect = 2e-61
 Identities = 123/123 (100%)
 Strand = Plus / Minus

                                                                             
Query: 1182      aaaactctgcccctgttagaaaaccaaataaaagagagtcaccagaaaataacagaggag 1241
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214997040 aaaactctgcccctgttagaaaaccaaataaaagagagtcaccagaaaataacagaggag 214996981

                                                                             
Query: 1242      ttacagaagtatggctccgatattccagaggatgaaagcgggaagatgttttttctgata 1301
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214996980 ttacagaagtatggctccgatattccagaggatgaaagcgggaagatgttttttctgata 214996921

                    
Query: 1302      gat 1304
                 |||
Sbjct: 214996920 gat 214996918



 Score =  204 bits (103), Expect = 2e-49
 Identities = 133/143 (93%)
 Strand = Plus / Minus

                                                                             
Query: 762       cagatcaagtctctgatcaagaagtacatctgtaagcaggagaccatcaacttggtggtg 821
                 ||||||||| | || |||| ||||||||||    ||||| ||||||||||||||||||||
Sbjct: 215046523 cagatcaaggcgctcatcaggaagtacatccaggagcagcagaccatcaacttggtggtg 215046464

                                                                             
Query: 822       gtcccctgcaacgtggacattgccaccacggaggcgctgcgcatggcccaggaggtggac 881
                 |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 215046463 gtcccctgcaacgtggacatcgccaccacggaggcgctgcgcatggcccaggaggtggac 215046404

                                        
Query: 882       cccgaaggagacaggaccatcgg 904
                 |||||||||||||||||||||||
Sbjct: 215046403 cccgaaggagacaggaccatcgg 215046381



 Score =  163 bits (82), Expect = 6e-37
 Identities = 82/82 (100%)
 Strand = Plus / Minus

                                                                             
Query: 1100      cagggatcttctggaggaagggcgggccacgatcccctgcctggcagaaagactgacctc 1159
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214998664 cagggatcttctggaggaagggcgggccacgatcccctgcctggcagaaagactgacctc 214998605

                                       
Query: 1160      tgaactcatcatgcacatctgt 1181
                 ||||||||||||||||||||||
Sbjct: 214998604 tgaactcatcatgcacatctgt 214998583



 Score =  155 bits (78), Expect = 1e-34
 Identities = 78/78 (100%)
 Strand = Plus / Minus

                                                                             
Query: 1605      gatttagtccggctcgccttcacagatgtttcagaaacaaattttaatgaatttttcaac 1664
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214993009 gatttagtccggctcgccttcacagatgtttcagaaacaaattttaatgaatttttcaac 214992950

                                   
Query: 1665      ctccacagaactgccaag 1682
                 ||||||||||||||||||
Sbjct: 214992949 ctccacagaactgccaag 214992932



 Score =  151 bits (76), Expect = 2e-33
 Identities = 76/76 (100%)
 Strand = Plus / Minus

                                                                             
Query: 74        agtgtgggagaacagccctgcatttctgctgacgggtcaacgtcacagcgtcaaagaaaa 133
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215011282 agtgtgggagaacagccctgcatttctgctgacgggtcaacgtcacagcgtcaaagaaaa 215011223

                                 
Query: 134       ggaaggtacatttcag 149
                 ||||||||||||||||
Sbjct: 215011222 ggaaggtacatttcag 215011207



 Score =  135 bits (68), Expect = 1e-28
 Identities = 71/72 (98%)
 Strand = Plus / Minus

                                                                             
Query: 1         ggggcgcggctcgcgcggcagaaaagcggaggagcagccagaccccggcgctggtcaccg 60
                 |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215014754 ggggcggggctcgcgcggcagaaaagcggaggagcagccagaccccggcgctggtcaccg 215014695

                             
Query: 61        caccggggacgg 72
                 ||||||||||||
Sbjct: 215014694 caccggggacgg 215014683



 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 49/49 (100%)
 Strand = Plus / Minus

                                                                  
Query: 2438      gtataggatactggtccccgcatagcatcatagaagggtcattctggtt 2486
                 |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214989050 gtataggatactggtccccgcatagcatcatagaagggtcattctggtt 214989002



 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 49/49 (100%)
 Strand = Plus / Plus

                                                                  
Query: 2438      gtataggatactggtccccgcatagcatcatagaagggtcattctggtt 2486
                 |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215347276 gtataggatactggtccccgcatagcatcatagaagggtcattctggtt 215347324



 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 114/138 (82%)
 Strand = Plus / Minus

                                                                             
Query: 608       agcccagattgccatcgctggggaaggcgtgggaatcagtcatgagctaatcagtctgga 667
                 |||||||  |||||||||||||   || || || ||||| || ||||| |||||||||||
Sbjct: 215048393 agcccaggatgccatcgctgggagcggagttggcatcagccacgagctcatcagtctgga 215048334

                                                                             
Query: 668       ggtcagctcccctcacgtcccagatctgaccctcatagaccttcctggcatcaccagggt 727
                 ||||| ||||||  | || ||||| ||||||||||| || ||||| ||||||||||||||
Sbjct: 215048333 ggtcacctccccggaggttccagacctgaccctcatcgatcttcccggcatcaccagggt 215048274

                                   
Query: 728       agctgtaggcaatcagcc 745
                  || || ||||| |||||
Sbjct: 215048273 ggccgtgggcaaccagcc 215048256



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 61/71 (85%)
 Strand = Plus / Minus

                                                                             
Query: 987       aagaagggctacatgattgtcaagtgcaggggccagcaggacatccaggaccagctgagc 1046
                 ||||||||||||||||| || |||||| | ||||||||||| |||  | || ||||||||
Sbjct: 215041583 aagaagggctacatgatagtgaagtgccgtggccagcaggagatcttgaacaagctgagc 215041524

                            
Query: 1047      ctggccaaggc 1057
                 |||||| ||||
Sbjct: 215041523 ctggccgaggc 215041513


  Database: Sscrofa_10.2.fasta
    Posted date:  Nov 16, 2011 10:34 AM
  Number of letters in database: 2,808,509,378
  Number of sequences in database:  4582
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 72,963,293
Number of extensions: 584
Number of successful extensions: 584
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 584
Number of HSP's successfully gapped: 22
Length of query: 2486
Length of database: 2,808,509,378
Length adjustment: 22
Effective length of query: 2464
Effective length of database: 2,808,408,574
Effective search space: 6919918726336
Effective search space used: 6919918726336
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)