Animal-Genome cDNA 20110601C-000598

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-000598
         (1794 letters)

Database: RefSeq49_BP.fasta 
           33,088 sequences; 17,681,374 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_776404.2| actin, cytoplasmic 1 [Bos taurus].                   759   0.0  
Alignment   gi|NP_001028790.1| actin, cytoplasmic 2 [Bos taurus].                754   0.0  
Alignment   gi|NP_001029674.1| actin, aortic smooth muscle [Bos taurus].         724   0.0  
Alignment   gi|NP_001029757.1| actin, alpha cardiac muscle 1 [Bos taurus].       722   0.0  
Alignment   gi|XP_002696363.1| PREDICTED: beta actin-like [Bos taurus].          722   0.0  
Alignment   gi|XP_001249299.2| PREDICTED: beta actin [Bos taurus].               722   0.0  
Alignment   gi|NP_001013610.1| actin, gamma-enteric smooth muscle [Bos taur...   720   0.0  
Alignment   gi|NP_776650.1| actin, alpha skeletal muscle [Bos taurus].           718   0.0  
Alignment   gi|NP_001096808.1| beta-centractin [Bos taurus].                     428   e-120
Alignment   gi|NP_001180177.1| alpha-centractin [Bos taurus].                    424   e-118

>ref|NP_776404.2| actin, cytoplasmic 1 [Bos taurus].
          Length = 375

 Score =  759 bits (1960), Expect = 0.0
 Identities = 375/375 (100%), Positives = 375/375 (100%)
 Frame = +2

Query: 98   MDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 277
            MDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
Sbjct: 1    MDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 60

Query: 278  KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 457
            KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 61   KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 120

Query: 458  QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL 637
            QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL
Sbjct: 121  QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL 180

Query: 638  AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY 817
            AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY
Sbjct: 181  AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY 240

Query: 818  ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS 997
            ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS
Sbjct: 241  ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS 300

Query: 998  GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 1177
            GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
Sbjct: 301  GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 360

Query: 1178 EYDESGPSIVHRKCF 1222
            EYDESGPSIVHRKCF
Sbjct: 361  EYDESGPSIVHRKCF 375


>ref|NP_001028790.1| actin, cytoplasmic 2 [Bos taurus].
          Length = 375

 Score =  754 bits (1947), Expect = 0.0
 Identities = 371/375 (98%), Positives = 375/375 (100%)
 Frame = +2

Query: 98   MDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 277
            M+++IAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
Sbjct: 1    MEEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 60

Query: 278  KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 457
            KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 61   KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 120

Query: 458  QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL 637
            QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL
Sbjct: 121  QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL 180

Query: 638  AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY 817
            AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY
Sbjct: 181  AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY 240

Query: 818  ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS 997
            ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS
Sbjct: 241  ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS 300

Query: 998  GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 1177
            GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
Sbjct: 301  GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 360

Query: 1178 EYDESGPSIVHRKCF 1222
            EYDESGPSIVHRKCF
Sbjct: 361  EYDESGPSIVHRKCF 375


>ref|NP_001029674.1| actin, aortic smooth muscle [Bos taurus].
          Length = 377

 Score =  724 bits (1868), Expect = 0.0
 Identities = 352/374 (94%), Positives = 363/374 (97%)
 Frame = +2

Query: 101  DDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 280
            ++D  ALV DNGSG+CKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 4    EEDSTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 63

Query: 281  RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 460
            RGILTLKYPIEHGI+TNWDDMEKIWHH+FYNELRVAPEEHP LLTEAPLNPKANREKMTQ
Sbjct: 64   RGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREKMTQ 123

Query: 461  IMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 640
            IMFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVTH VPIYEGYALPHAI+RLDLA
Sbjct: 124  IMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLA 183

Query: 641  GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 820
            GRDLTDYLMKILTERGYSF TTAEREIVRDIKEKLCYVALDFE EMATAASSSSLEKSYE
Sbjct: 184  GRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYE 243

Query: 821  LPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSG 1000
            LPDGQVITIGNERFRCPE LFQPSF+GMES GIHETT+NSIMKCD+DIRKDLYAN VLSG
Sbjct: 244  LPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSG 303

Query: 1001 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 1180
            GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE
Sbjct: 304  GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 363

Query: 1181 YDESGPSIVHRKCF 1222
            YDE+GPSIVHRKCF
Sbjct: 364  YDEAGPSIVHRKCF 377


>ref|NP_001029757.1| actin, alpha cardiac muscle 1 [Bos taurus].
          Length = 377

 Score =  722 bits (1863), Expect = 0.0
 Identities = 352/374 (94%), Positives = 362/374 (96%)
 Frame = +2

Query: 101  DDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 280
            D++  ALV DNGSG+ KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 4    DEETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 63

Query: 281  RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 460
            RGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP LLTEAPLNPKANREKMTQ
Sbjct: 64   RGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQ 123

Query: 461  IMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 640
            IMFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVTH VPIYEGYALPHAI+RLDLA
Sbjct: 124  IMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLA 183

Query: 641  GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 820
            GRDLTDYLMKILTERGYSF TTAEREIVRDIKEKLCYVALDFE EMATAASSSSLEKSYE
Sbjct: 184  GRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYE 243

Query: 821  LPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSG 1000
            LPDGQVITIGNERFRCPE LFQPSF+GMES GIHETT+NSIMKCD+DIRKDLYAN VLSG
Sbjct: 244  LPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSG 303

Query: 1001 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 1180
            GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE
Sbjct: 304  GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 363

Query: 1181 YDESGPSIVHRKCF 1222
            YDE+GPSIVHRKCF
Sbjct: 364  YDEAGPSIVHRKCF 377


>ref|XP_002696363.1| PREDICTED: beta actin-like [Bos taurus].
          Length = 376

 Score =  722 bits (1863), Expect = 0.0
 Identities = 349/374 (93%), Positives = 365/374 (97%)
 Frame = +2

Query: 101  DDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 280
            DD+++ALVVDNGSGMCKAGF GDDAPRAVFPS+VGRPRHQGVMVGMGQKD YVGDEAQSK
Sbjct: 3    DDELSALVVDNGSGMCKAGFGGDDAPRAVFPSMVGRPRHQGVMVGMGQKDCYVGDEAQSK 62

Query: 281  RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 460
            RGILTLKYPIEHG+VTNWDDMEKIWHHTFYNELRVAP+EHP+LLTEAPLNPK NREKMTQ
Sbjct: 63   RGILTLKYPIEHGVVTNWDDMEKIWHHTFYNELRVAPDEHPILLTEAPLNPKINREKMTQ 122

Query: 461  IMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 640
            IMFE FNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA
Sbjct: 123  IMFEAFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 182

Query: 641  GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 820
            GRDLTDYLMKILTERGYSFTTTAEREIVRD+KEKLCYVALDFEQEM + A+SSSLE+SYE
Sbjct: 183  GRDLTDYLMKILTERGYSFTTTAEREIVRDVKEKLCYVALDFEQEMVSTAASSSLERSYE 242

Query: 821  LPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSG 1000
            LPDGQVITIGNERFRCPEA+FQPSFLG+ES GIHETTFNSIMKCDVDIRKDLYANTVLSG
Sbjct: 243  LPDGQVITIGNERFRCPEAIFQPSFLGIESSGIHETTFNSIMKCDVDIRKDLYANTVLSG 302

Query: 1001 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 1180
            G+TMYPGIA+RMQKEI ALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE
Sbjct: 303  GSTMYPGIAERMQKEIVALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 362

Query: 1181 YDESGPSIVHRKCF 1222
            YDE+GP IVHRKCF
Sbjct: 363  YDEAGPPIVHRKCF 376


>ref|XP_001249299.2| PREDICTED: beta actin [Bos taurus].
          Length = 376

 Score =  722 bits (1863), Expect = 0.0
 Identities = 349/374 (93%), Positives = 365/374 (97%)
 Frame = +2

Query: 101  DDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 280
            DD+++ALVVDNGSGMCKAGF GDDAPRAVFPS+VGRPRHQGVMVGMGQKD YVGDEAQSK
Sbjct: 3    DDELSALVVDNGSGMCKAGFGGDDAPRAVFPSMVGRPRHQGVMVGMGQKDCYVGDEAQSK 62

Query: 281  RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 460
            RGILTLKYPIEHG+VTNWDDMEKIWHHTFYNELRVAP+EHP+LLTEAPLNPK NREKMTQ
Sbjct: 63   RGILTLKYPIEHGVVTNWDDMEKIWHHTFYNELRVAPDEHPILLTEAPLNPKINREKMTQ 122

Query: 461  IMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 640
            IMFE FNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA
Sbjct: 123  IMFEAFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 182

Query: 641  GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 820
            GRDLTDYLMKILTERGYSFTTTAEREIVRD+KEKLCYVALDFEQEM + A+SSSLE+SYE
Sbjct: 183  GRDLTDYLMKILTERGYSFTTTAEREIVRDVKEKLCYVALDFEQEMVSTAASSSLERSYE 242

Query: 821  LPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSG 1000
            LPDGQVITIGNERFRCPEA+FQPSFLG+ES GIHETTFNSIMKCDVDIRKDLYANTVLSG
Sbjct: 243  LPDGQVITIGNERFRCPEAIFQPSFLGIESSGIHETTFNSIMKCDVDIRKDLYANTVLSG 302

Query: 1001 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 1180
            G+TMYPGIA+RMQKEI ALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE
Sbjct: 303  GSTMYPGIAERMQKEIVALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 362

Query: 1181 YDESGPSIVHRKCF 1222
            YDE+GP IVHRKCF
Sbjct: 363  YDEAGPPIVHRKCF 376


>ref|NP_001013610.1| actin, gamma-enteric smooth muscle [Bos taurus].
          Length = 376

 Score =  720 bits (1859), Expect = 0.0
 Identities = 350/374 (93%), Positives = 362/374 (96%)
 Frame = +2

Query: 101  DDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 280
            +++  ALV DNGSG+CKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 3    EEETTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 62

Query: 281  RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 460
            RGILTLKYPIEHGI+TNWDDMEKIWHH+FYNELRVAPEEHP LLTEAPLNPKANREKMTQ
Sbjct: 63   RGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREKMTQ 122

Query: 461  IMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 640
            IMFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVTH VPIYEGYALPHAI+RLDLA
Sbjct: 123  IMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLA 182

Query: 641  GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 820
            GRDLTDYLMKILTERGYSF TTAEREIVRDIKEKLCYVALDFE EMATAASSSSLEKSYE
Sbjct: 183  GRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYE 242

Query: 821  LPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSG 1000
            LPDGQVITIGNERFRCPE LFQPSF+GMES GIHETT+NSIMKCD+DIRKDLYAN VLSG
Sbjct: 243  LPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSG 302

Query: 1001 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 1180
            GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK E
Sbjct: 303  GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKPE 362

Query: 1181 YDESGPSIVHRKCF 1222
            YDE+GPSIVHRKCF
Sbjct: 363  YDEAGPSIVHRKCF 376


>ref|NP_776650.1| actin, alpha skeletal muscle [Bos taurus].
          Length = 377

 Score =  718 bits (1853), Expect = 0.0
 Identities = 349/374 (93%), Positives = 361/374 (96%)
 Frame = +2

Query: 101  DDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 280
            +D+  ALV DNGSG+ KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 4    EDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 63

Query: 281  RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 460
            RGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP LLTEAPLNPKANREKMTQ
Sbjct: 64   RGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQ 123

Query: 461  IMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 640
            IMFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVTH VPIYEGYALPHAI+RLDLA
Sbjct: 124  IMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLA 183

Query: 641  GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 820
            GRDLTDYLMKILTERGYSF TTAEREIVRDIKEKLCYVALDFE EMATAASSSSLEKSYE
Sbjct: 184  GRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYE 243

Query: 821  LPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSG 1000
            LPDGQVITIGNERFRCPE LFQPSF+GMES GIHETT+NSIMKCD+DIRKDLYAN V+SG
Sbjct: 244  LPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSG 303

Query: 1001 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 1180
            GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSIL SLSTFQQMWI+KQE
Sbjct: 304  GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILRSLSTFQQMWITKQE 363

Query: 1181 YDESGPSIVHRKCF 1222
            YDE+GPSIVHRKCF
Sbjct: 364  YDEAGPSIVHRKCF 377


>ref|NP_001096808.1| beta-centractin [Bos taurus].
          Length = 376

 Score =  428 bits (1101), Expect = e-120
 Identities = 197/369 (53%), Positives = 275/369 (74%), Gaps = 1/369 (0%)
 Frame = +2

Query: 119  LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 298
            +V+DNGSG+ KAGFAGD  P+  FP+ VGRP+H  VM G  + D ++G +A+  RG+L +
Sbjct: 12   VVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHMRVMAGALEGDLFIGPKAEEHRGLLAI 71

Query: 299  KYPIEHGIVTNWDDMEKIWHHTFY-NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 475
            +YP+EHG+V +W+DME+IW + +  ++L+   EEHPVLLTEAPLNP  NREK  ++ FET
Sbjct: 72   RYPMEHGVVRDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPSKNREKAAEVFFET 131

Query: 476  FNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLT 655
            FN PA+++++QAVLSLYA+GRTTG+V+DSGDGVTH VP+YEG+A+PH+I+R+D+AGRD++
Sbjct: 132  FNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPVYEGFAMPHSIMRVDIAGRDVS 191

Query: 656  DYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQ 835
             YL  +L + G  F T+AE E+VR IKE+ CY++++ +++ A        +  Y LPDG 
Sbjct: 192  RYLRLLLRKEGADFHTSAEFEVVRTIKERACYLSINPQKDEALETE----KVQYTLPDGS 247

Query: 836  VITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMY 1015
             + +G  RFR PE LFQP  +G ES G+HE    +I K D+D+R+ L+AN +LSGG+T++
Sbjct: 248  TLNVGPARFRAPELLFQPDLIGDESEGLHEVLVFAIHKSDMDLRRTLFANIMLSGGSTLF 307

Query: 1016 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 1195
             G  DR+  E+  LAP  +KIKI AP ER YS WIGGSILASL TF++MW+SK+EY+E G
Sbjct: 308  KGFGDRLLSEVKKLAPKDVKIKISAPQERLYSTWIGGSILASLDTFKKMWVSKKEYEEDG 367

Query: 1196 PSIVHRKCF 1222
               +HRK F
Sbjct: 368  SRAIHRKTF 376


>ref|NP_001180177.1| alpha-centractin [Bos taurus].
          Length = 376

 Score =  424 bits (1091), Expect = e-118
 Identities = 196/369 (53%), Positives = 276/369 (74%), Gaps = 1/369 (0%)
 Frame = +2

Query: 119  LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 298
            +V+DNGSG+ KAGFAGD  P+  FP+ VGRP+H  VM G  + D ++G +A+  RG+L++
Sbjct: 12   VVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHVRVMAGALEGDIFIGPKAEEHRGLLSI 71

Query: 299  KYPIEHGIVTNWDDMEKIWHHTFY-NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 475
            +YP+EHGIV +W+DME+IW + +  ++L+   EEHPVLLTEAPLNP+ NRE+  ++ FET
Sbjct: 72   RYPMEHGIVKDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPRKNRERAAEVFFET 131

Query: 476  FNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLT 655
            FN PA+++++QAVLSLYA+GRTTG+V+DSGDGVTH VPIYEG+A+PH+I+R+D+AGRD++
Sbjct: 132  FNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRIDIAGRDVS 191

Query: 656  DYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQ 835
             +L   L + GY F +++E EIV+ IKE+ CY++++ +++       +     Y LPDG 
Sbjct: 192  RFLRLYLRKEGYDFHSSSEFEIVKAIKERACYLSINPQKDETLETEKA----QYYLPDGS 247

Query: 836  VITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMY 1015
             I IG  RFR PE LF+P  +G ES GIHE    +I K D+D+R+ L++N VLSGG+T++
Sbjct: 248  TIEIGPSRFRAPELLFRPDLIGEESEGIHEVLVFAIQKSDMDLRRTLFSNIVLSGGSTLF 307

Query: 1016 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 1195
             G  DR+  E+  LAP  +KI+I AP ER YS WIGGSILASL TF++MW+SK+EY+E G
Sbjct: 308  KGFGDRLLSEVKKLAPKDVKIRISAPQERLYSTWIGGSILASLDTFKKMWVSKKEYEEDG 367

Query: 1196 PSIVHRKCF 1222
               +HRK F
Sbjct: 368  ARSIHRKTF 376


  Database: RefSeq49_BP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 17,681,374
  Number of sequences in database:  33,088
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 55,214,261
Number of extensions: 1412654
Number of successful extensions: 5714
Number of sequences better than 1.0e-05: 39
Number of HSP's gapped: 5599
Number of HSP's successfully gapped: 40
Length of query: 598
Length of database: 17,681,374
Length adjustment: 108
Effective length of query: 490
Effective length of database: 14,107,870
Effective search space: 6912856300
Effective search space used: 6912856300
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-000598
         (1794 letters)

Database: RefSeq49_CP.fasta 
           33,336 sequences; 18,874,504 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001182774.1| actin, cytoplasmic 1 [Canis lupus familiaris].    757   0.0  
Alignment   gi|XP_533132.2| PREDICTED: hypothetical protein XP_533132 [Cani...   748   0.0  
Alignment   gi|XP_861856.1| PREDICTED: similar to cytoplasmic beta-actin is...   746   0.0  
Alignment   gi|XP_534781.2| PREDICTED: similar to Actin, aortic smooth musc...   724   0.0  
Alignment   gi|XP_535424.1| PREDICTED: similar to Actin, alpha cardiac (Alp...   722   0.0  
Alignment   gi|XP_533002.2| PREDICTED: similar to Actin, gamma-enteric smoo...   720   0.0  
Alignment   gi|XP_544346.1| PREDICTED: similar to Actin, cytoplasmic 1 (Bet...   717   0.0  
Alignment   gi|NP_001003349.1| beta-actin-like [Canis lupus familiaris].         707   0.0  
Alignment   gi|XP_536888.2| PREDICTED: similar to cytoplasmic beta-actin is...   705   0.0  
Alignment   gi|XP_536230.2| PREDICTED: similar to cytoplasmic beta-actin [C...   684   0.0  

>ref|NP_001182774.1| actin, cytoplasmic 1 [Canis lupus familiaris].
          Length = 375

 Score =  757 bits (1954), Expect = 0.0
 Identities = 374/375 (99%), Positives = 374/375 (99%)
 Frame = +2

Query: 98   MDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 277
            MDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
Sbjct: 1    MDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 60

Query: 278  KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 457
            KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 61   KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 120

Query: 458  QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL 637
            QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL
Sbjct: 121  QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL 180

Query: 638  AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY 817
            AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY
Sbjct: 181  AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY 240

Query: 818  ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS 997
            ELPDGQVITIGNERFRCPEALFQPSFL MESCGIHETTFNSIMKCDVDIRKDLYANTVLS
Sbjct: 241  ELPDGQVITIGNERFRCPEALFQPSFLSMESCGIHETTFNSIMKCDVDIRKDLYANTVLS 300

Query: 998  GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 1177
            GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
Sbjct: 301  GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 360

Query: 1178 EYDESGPSIVHRKCF 1222
            EYDESGPSIVHRKCF
Sbjct: 361  EYDESGPSIVHRKCF 375


>ref|XP_533132.2| PREDICTED: hypothetical protein XP_533132 [Canis familiaris].
          Length = 375

 Score =  748 bits (1932), Expect = 0.0
 Identities = 368/375 (98%), Positives = 373/375 (99%)
 Frame = +2

Query: 98   MDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 277
            M+++IAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
Sbjct: 1    MEEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 60

Query: 278  KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 457
            KRGILTLKYPIEHGIVTNW+DMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK N EKMT
Sbjct: 61   KRGILTLKYPIEHGIVTNWEDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKTNGEKMT 120

Query: 458  QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL 637
            QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL
Sbjct: 121  QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL 180

Query: 638  AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY 817
            AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY
Sbjct: 181  AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY 240

Query: 818  ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS 997
            ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS
Sbjct: 241  ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS 300

Query: 998  GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 1177
            GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
Sbjct: 301  GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 360

Query: 1178 EYDESGPSIVHRKCF 1222
            EYDESGPSIVHRKCF
Sbjct: 361  EYDESGPSIVHRKCF 375


>ref|XP_861856.1| PREDICTED: similar to cytoplasmic beta-actin isoform 9 [Canis
            familiaris].
          Length = 376

 Score =  746 bits (1927), Expect = 0.0
 Identities = 372/376 (98%), Positives = 372/376 (98%), Gaps = 1/376 (0%)
 Frame = +2

Query: 98   MDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 277
            MDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
Sbjct: 1    MDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 60

Query: 278  KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 457
            KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 61   KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 120

Query: 458  QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL 637
            QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL
Sbjct: 121  QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL 180

Query: 638  AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY 817
            AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY
Sbjct: 181  AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY 240

Query: 818  ELPDGQVITIGNERFRCPEALFQPSFL-GMESCGIHETTFNSIMKCDVDIRKDLYANTVL 994
            ELPDGQVITIGNERFRCPEALF   FL GMESCGIHETTFNSIMKCDVDIRKDLYANTVL
Sbjct: 241  ELPDGQVITIGNERFRCPEALFHFCFLPGMESCGIHETTFNSIMKCDVDIRKDLYANTVL 300

Query: 995  SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK 1174
            SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK
Sbjct: 301  SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK 360

Query: 1175 QEYDESGPSIVHRKCF 1222
            QEYDESGPSIVHRKCF
Sbjct: 361  QEYDESGPSIVHRKCF 376


>ref|XP_534781.2| PREDICTED: similar to Actin, aortic smooth muscle (Alpha-actin 2)
            [Canis familiaris].
          Length = 377

 Score =  724 bits (1868), Expect = 0.0
 Identities = 352/374 (94%), Positives = 363/374 (97%)
 Frame = +2

Query: 101  DDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 280
            ++D  ALV DNGSG+CKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 4    EEDSTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 63

Query: 281  RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 460
            RGILTLKYPIEHGI+TNWDDMEKIWHH+FYNELRVAPEEHP LLTEAPLNPKANREKMTQ
Sbjct: 64   RGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREKMTQ 123

Query: 461  IMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 640
            IMFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVTH VPIYEGYALPHAI+RLDLA
Sbjct: 124  IMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLA 183

Query: 641  GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 820
            GRDLTDYLMKILTERGYSF TTAEREIVRDIKEKLCYVALDFE EMATAASSSSLEKSYE
Sbjct: 184  GRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYE 243

Query: 821  LPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSG 1000
            LPDGQVITIGNERFRCPE LFQPSF+GMES GIHETT+NSIMKCD+DIRKDLYAN VLSG
Sbjct: 244  LPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSG 303

Query: 1001 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 1180
            GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE
Sbjct: 304  GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 363

Query: 1181 YDESGPSIVHRKCF 1222
            YDE+GPSIVHRKCF
Sbjct: 364  YDEAGPSIVHRKCF 377


>ref|XP_535424.1| PREDICTED: similar to Actin, alpha cardiac (Alpha-cardiac actin)
            isoform 3 [Canis familiaris].
          Length = 377

 Score =  722 bits (1863), Expect = 0.0
 Identities = 352/374 (94%), Positives = 362/374 (96%)
 Frame = +2

Query: 101  DDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 280
            D++  ALV DNGSG+ KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 4    DEETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 63

Query: 281  RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 460
            RGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP LLTEAPLNPKANREKMTQ
Sbjct: 64   RGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQ 123

Query: 461  IMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 640
            IMFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVTH VPIYEGYALPHAI+RLDLA
Sbjct: 124  IMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLA 183

Query: 641  GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 820
            GRDLTDYLMKILTERGYSF TTAEREIVRDIKEKLCYVALDFE EMATAASSSSLEKSYE
Sbjct: 184  GRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYE 243

Query: 821  LPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSG 1000
            LPDGQVITIGNERFRCPE LFQPSF+GMES GIHETT+NSIMKCD+DIRKDLYAN VLSG
Sbjct: 244  LPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSG 303

Query: 1001 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 1180
            GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE
Sbjct: 304  GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 363

Query: 1181 YDESGPSIVHRKCF 1222
            YDE+GPSIVHRKCF
Sbjct: 364  YDEAGPSIVHRKCF 377


>ref|XP_533002.2| PREDICTED: similar to Actin, gamma-enteric smooth muscle (Smooth
            muscle gamma actin) (Alpha-actin 3) [Canis familiaris].
          Length = 376

 Score =  720 bits (1859), Expect = 0.0
 Identities = 350/374 (93%), Positives = 362/374 (96%)
 Frame = +2

Query: 101  DDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 280
            +++  ALV DNGSG+CKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 3    EEETTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 62

Query: 281  RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 460
            RGILTLKYPIEHGI+TNWDDMEKIWHH+FYNELRVAPEEHP LLTEAPLNPKANREKMTQ
Sbjct: 63   RGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREKMTQ 122

Query: 461  IMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 640
            IMFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVTH VPIYEGYALPHAI+RLDLA
Sbjct: 123  IMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLA 182

Query: 641  GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 820
            GRDLTDYLMKILTERGYSF TTAEREIVRDIKEKLCYVALDFE EMATAASSSSLEKSYE
Sbjct: 183  GRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYE 242

Query: 821  LPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSG 1000
            LPDGQVITIGNERFRCPE LFQPSF+GMES GIHETT+NSIMKCD+DIRKDLYAN VLSG
Sbjct: 243  LPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSG 302

Query: 1001 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 1180
            GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK E
Sbjct: 303  GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKPE 362

Query: 1181 YDESGPSIVHRKCF 1222
            YDE+GPSIVHRKCF
Sbjct: 363  YDEAGPSIVHRKCF 376


>ref|XP_544346.1| PREDICTED: similar to Actin, cytoplasmic 1 (Beta-actin 1) [Canis
            familiaris].
          Length = 376

 Score =  717 bits (1852), Expect = 0.0
 Identities = 346/374 (92%), Positives = 364/374 (97%)
 Frame = +2

Query: 101  DDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 280
            DD+++ALVVDNGSGMCKAGF GDDAPRAVFPS+VGRPRHQGVMVGMGQKD YVGDEAQSK
Sbjct: 3    DDELSALVVDNGSGMCKAGFGGDDAPRAVFPSMVGRPRHQGVMVGMGQKDCYVGDEAQSK 62

Query: 281  RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 460
            RGILTLKYPIEHG+VTNWDDMEKIWHHTFYNELRVAP+EHP+LLTEAPLNPK NREKMTQ
Sbjct: 63   RGILTLKYPIEHGVVTNWDDMEKIWHHTFYNELRVAPDEHPILLTEAPLNPKINREKMTQ 122

Query: 461  IMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 640
            IMFE FNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA
Sbjct: 123  IMFEAFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 182

Query: 641  GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 820
            GRDLTDYLMKILTERGY+FTTTAEREIVRD+KEKLCYVALDFEQEM +AA+SSSLE+SYE
Sbjct: 183  GRDLTDYLMKILTERGYNFTTTAEREIVRDVKEKLCYVALDFEQEMGSAAASSSLERSYE 242

Query: 821  LPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSG 1000
            LPDGQVIT+GNERFRCPE++FQPSFLG+ES GIHETTFNSIMKCDVDIRKDLYAN VLSG
Sbjct: 243  LPDGQVITLGNERFRCPESIFQPSFLGIESSGIHETTFNSIMKCDVDIRKDLYANIVLSG 302

Query: 1001 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 1180
            G+TMYPGIADRMQKEI  LAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE
Sbjct: 303  GSTMYPGIADRMQKEIMTLAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 362

Query: 1181 YDESGPSIVHRKCF 1222
            YDE+GP IVHRKCF
Sbjct: 363  YDEAGPPIVHRKCF 376


>ref|NP_001003349.1| beta-actin-like [Canis lupus familiaris].
          Length = 375

 Score =  707 bits (1825), Expect = 0.0
 Identities = 353/375 (94%), Positives = 357/375 (95%)
 Frame = +2

Query: 98   MDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 277
            MDD+IAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV MGQKDSYVGDEAQS
Sbjct: 1    MDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVRMGQKDSYVGDEAQS 60

Query: 278  KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 457
            KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEE PVLLTEAPLNPKANREKMT
Sbjct: 61   KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEAPVLLTEAPLNPKANREKMT 120

Query: 458  QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL 637
            QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL
Sbjct: 121  QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL 180

Query: 638  AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY 817
            AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKE+               ASSSSLEKSY
Sbjct: 181  AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEEALLRRPGLRAGDGHGASSSSLEKSY 240

Query: 818  ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS 997
            ELPDGQVITIGNERFRCP+ALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS
Sbjct: 241  ELPDGQVITIGNERFRCPKALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS 300

Query: 998  GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 1177
            GGTTMYPGIADRMQKEITALAP+ MKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
Sbjct: 301  GGTTMYPGIADRMQKEITALAPARMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 360

Query: 1178 EYDESGPSIVHRKCF 1222
            EYDESGPSIVHRKCF
Sbjct: 361  EYDESGPSIVHRKCF 375


>ref|XP_536888.2| PREDICTED: similar to cytoplasmic beta-actin isoform 1 [Canis
            familiaris].
          Length = 361

 Score =  705 bits (1820), Expect = 0.0
 Identities = 356/375 (94%), Positives = 356/375 (94%)
 Frame = +2

Query: 98   MDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 277
            MDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
Sbjct: 1    MDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 60

Query: 278  KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 457
            KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 61   KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 120

Query: 458  QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL 637
            QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL
Sbjct: 121  QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL 180

Query: 638  AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY 817
            AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY
Sbjct: 181  AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY 240

Query: 818  ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS 997
            ELPDGQ               F P   GMESCGIHETTFNSIMKCDVDIRKDLYANTVLS
Sbjct: 241  ELPDGQ-----------SSFCFLP---GMESCGIHETTFNSIMKCDVDIRKDLYANTVLS 286

Query: 998  GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 1177
            GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
Sbjct: 287  GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 346

Query: 1178 EYDESGPSIVHRKCF 1222
            EYDESGPSIVHRKCF
Sbjct: 347  EYDESGPSIVHRKCF 361


>ref|XP_536230.2| PREDICTED: similar to cytoplasmic beta-actin [Canis familiaris].
          Length = 389

 Score =  684 bits (1766), Expect = 0.0
 Identities = 339/343 (98%), Positives = 339/343 (98%)
 Frame = +2

Query: 194  SIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYN 373
            SIVGRPRH GVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYN
Sbjct: 47   SIVGRPRHPGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYN 106

Query: 374  ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 553
            EL VAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV
Sbjct: 107  ELGVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 166

Query: 554  MDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI 733
            MDS DGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT AEREIVRDI
Sbjct: 167  MDSSDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTIAEREIVRDI 226

Query: 734  KEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESC 913
            KEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESC
Sbjct: 227  KEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESC 286

Query: 914  GIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP 1093
            GIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP
Sbjct: 287  GIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP 346

Query: 1094 PERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 1222
            PERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 347  PERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 389


  Database: RefSeq49_CP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,874,504
  Number of sequences in database:  33,336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 57,663,040
Number of extensions: 1405264
Number of successful extensions: 6036
Number of sequences better than 1.0e-05: 56
Number of HSP's gapped: 5932
Number of HSP's successfully gapped: 59
Length of query: 598
Length of database: 18,874,504
Length adjustment: 109
Effective length of query: 489
Effective length of database: 15,240,880
Effective search space: 7452790320
Effective search space used: 7452790320
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-000598
         (1794 letters)

Database: RefSeq49_HP.fasta 
           32,964 sequences; 18,297,164 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001092.1| actin, cytoplasmic 1 [Homo sapiens].                 759   0.0  
Alignment   gi|NP_001186883.1| actin, cytoplasmic 2 [Homo sapiens].              754   0.0  
Alignment   gi|NP_001605.1| actin, cytoplasmic 2 [Homo sapiens].                 754   0.0  
Alignment   gi|NP_001604.1| actin, aortic smooth muscle [Homo sapiens].          724   0.0  
Alignment   gi|NP_001135417.1| actin, aortic smooth muscle [Homo sapiens].       724   0.0  
Alignment   gi|NP_005150.1| actin, alpha cardiac muscle 1 proprotein [Homo ...   722   0.0  
Alignment   gi|NP_001606.1| actin, gamma-enteric smooth muscle isoform 1 pr...   720   0.0  
Alignment   gi|NP_001091.1| actin, alpha skeletal muscle [Homo sapiens].         720   0.0  
Alignment   gi|NP_001017992.1| beta-actin-like protein 2 [Homo sapiens].         711   0.0  
Alignment   gi|NP_001077007.1| POTE ankyrin domain family member E [Homo sa...   704   0.0  

>ref|NP_001092.1| actin, cytoplasmic 1 [Homo sapiens].
          Length = 375

 Score =  759 bits (1960), Expect = 0.0
 Identities = 375/375 (100%), Positives = 375/375 (100%)
 Frame = +2

Query: 98   MDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 277
            MDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
Sbjct: 1    MDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 60

Query: 278  KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 457
            KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 61   KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 120

Query: 458  QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL 637
            QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL
Sbjct: 121  QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL 180

Query: 638  AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY 817
            AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY
Sbjct: 181  AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY 240

Query: 818  ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS 997
            ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS
Sbjct: 241  ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS 300

Query: 998  GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 1177
            GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
Sbjct: 301  GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 360

Query: 1178 EYDESGPSIVHRKCF 1222
            EYDESGPSIVHRKCF
Sbjct: 361  EYDESGPSIVHRKCF 375


>ref|NP_001186883.1| actin, cytoplasmic 2 [Homo sapiens].
          Length = 375

 Score =  754 bits (1947), Expect = 0.0
 Identities = 371/375 (98%), Positives = 375/375 (100%)
 Frame = +2

Query: 98   MDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 277
            M+++IAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
Sbjct: 1    MEEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 60

Query: 278  KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 457
            KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 61   KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 120

Query: 458  QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL 637
            QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL
Sbjct: 121  QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL 180

Query: 638  AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY 817
            AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY
Sbjct: 181  AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY 240

Query: 818  ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS 997
            ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS
Sbjct: 241  ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS 300

Query: 998  GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 1177
            GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
Sbjct: 301  GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 360

Query: 1178 EYDESGPSIVHRKCF 1222
            EYDESGPSIVHRKCF
Sbjct: 361  EYDESGPSIVHRKCF 375


>ref|NP_001605.1| actin, cytoplasmic 2 [Homo sapiens].
          Length = 375

 Score =  754 bits (1947), Expect = 0.0
 Identities = 371/375 (98%), Positives = 375/375 (100%)
 Frame = +2

Query: 98   MDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 277
            M+++IAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
Sbjct: 1    MEEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 60

Query: 278  KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 457
            KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 61   KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 120

Query: 458  QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL 637
            QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL
Sbjct: 121  QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL 180

Query: 638  AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY 817
            AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY
Sbjct: 181  AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY 240

Query: 818  ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS 997
            ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS
Sbjct: 241  ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS 300

Query: 998  GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 1177
            GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
Sbjct: 301  GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 360

Query: 1178 EYDESGPSIVHRKCF 1222
            EYDESGPSIVHRKCF
Sbjct: 361  EYDESGPSIVHRKCF 375


>ref|NP_001604.1| actin, aortic smooth muscle [Homo sapiens].
          Length = 377

 Score =  724 bits (1868), Expect = 0.0
 Identities = 352/374 (94%), Positives = 363/374 (97%)
 Frame = +2

Query: 101  DDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 280
            ++D  ALV DNGSG+CKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 4    EEDSTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 63

Query: 281  RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 460
            RGILTLKYPIEHGI+TNWDDMEKIWHH+FYNELRVAPEEHP LLTEAPLNPKANREKMTQ
Sbjct: 64   RGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREKMTQ 123

Query: 461  IMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 640
            IMFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVTH VPIYEGYALPHAI+RLDLA
Sbjct: 124  IMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLA 183

Query: 641  GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 820
            GRDLTDYLMKILTERGYSF TTAEREIVRDIKEKLCYVALDFE EMATAASSSSLEKSYE
Sbjct: 184  GRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYE 243

Query: 821  LPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSG 1000
            LPDGQVITIGNERFRCPE LFQPSF+GMES GIHETT+NSIMKCD+DIRKDLYAN VLSG
Sbjct: 244  LPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSG 303

Query: 1001 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 1180
            GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE
Sbjct: 304  GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 363

Query: 1181 YDESGPSIVHRKCF 1222
            YDE+GPSIVHRKCF
Sbjct: 364  YDEAGPSIVHRKCF 377


>ref|NP_001135417.1| actin, aortic smooth muscle [Homo sapiens].
          Length = 377

 Score =  724 bits (1868), Expect = 0.0
 Identities = 352/374 (94%), Positives = 363/374 (97%)
 Frame = +2

Query: 101  DDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 280
            ++D  ALV DNGSG+CKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 4    EEDSTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 63

Query: 281  RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 460
            RGILTLKYPIEHGI+TNWDDMEKIWHH+FYNELRVAPEEHP LLTEAPLNPKANREKMTQ
Sbjct: 64   RGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREKMTQ 123

Query: 461  IMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 640
            IMFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVTH VPIYEGYALPHAI+RLDLA
Sbjct: 124  IMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLA 183

Query: 641  GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 820
            GRDLTDYLMKILTERGYSF TTAEREIVRDIKEKLCYVALDFE EMATAASSSSLEKSYE
Sbjct: 184  GRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYE 243

Query: 821  LPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSG 1000
            LPDGQVITIGNERFRCPE LFQPSF+GMES GIHETT+NSIMKCD+DIRKDLYAN VLSG
Sbjct: 244  LPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSG 303

Query: 1001 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 1180
            GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE
Sbjct: 304  GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 363

Query: 1181 YDESGPSIVHRKCF 1222
            YDE+GPSIVHRKCF
Sbjct: 364  YDEAGPSIVHRKCF 377


>ref|NP_005150.1| actin, alpha cardiac muscle 1 proprotein [Homo sapiens].
          Length = 377

 Score =  722 bits (1863), Expect = 0.0
 Identities = 352/374 (94%), Positives = 362/374 (96%)
 Frame = +2

Query: 101  DDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 280
            D++  ALV DNGSG+ KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 4    DEETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 63

Query: 281  RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 460
            RGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP LLTEAPLNPKANREKMTQ
Sbjct: 64   RGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQ 123

Query: 461  IMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 640
            IMFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVTH VPIYEGYALPHAI+RLDLA
Sbjct: 124  IMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLA 183

Query: 641  GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 820
            GRDLTDYLMKILTERGYSF TTAEREIVRDIKEKLCYVALDFE EMATAASSSSLEKSYE
Sbjct: 184  GRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYE 243

Query: 821  LPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSG 1000
            LPDGQVITIGNERFRCPE LFQPSF+GMES GIHETT+NSIMKCD+DIRKDLYAN VLSG
Sbjct: 244  LPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSG 303

Query: 1001 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 1180
            GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE
Sbjct: 304  GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 363

Query: 1181 YDESGPSIVHRKCF 1222
            YDE+GPSIVHRKCF
Sbjct: 364  YDEAGPSIVHRKCF 377


>ref|NP_001606.1| actin, gamma-enteric smooth muscle isoform 1 precursor [Homo
            sapiens].
          Length = 376

 Score =  720 bits (1859), Expect = 0.0
 Identities = 350/374 (93%), Positives = 362/374 (96%)
 Frame = +2

Query: 101  DDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 280
            +++  ALV DNGSG+CKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 3    EEETTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 62

Query: 281  RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 460
            RGILTLKYPIEHGI+TNWDDMEKIWHH+FYNELRVAPEEHP LLTEAPLNPKANREKMTQ
Sbjct: 63   RGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREKMTQ 122

Query: 461  IMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 640
            IMFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVTH VPIYEGYALPHAI+RLDLA
Sbjct: 123  IMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLA 182

Query: 641  GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 820
            GRDLTDYLMKILTERGYSF TTAEREIVRDIKEKLCYVALDFE EMATAASSSSLEKSYE
Sbjct: 183  GRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYE 242

Query: 821  LPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSG 1000
            LPDGQVITIGNERFRCPE LFQPSF+GMES GIHETT+NSIMKCD+DIRKDLYAN VLSG
Sbjct: 243  LPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSG 302

Query: 1001 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 1180
            GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK E
Sbjct: 303  GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKPE 362

Query: 1181 YDESGPSIVHRKCF 1222
            YDE+GPSIVHRKCF
Sbjct: 363  YDEAGPSIVHRKCF 376


>ref|NP_001091.1| actin, alpha skeletal muscle [Homo sapiens].
          Length = 377

 Score =  720 bits (1858), Expect = 0.0
 Identities = 350/374 (93%), Positives = 362/374 (96%)
 Frame = +2

Query: 101  DDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 280
            +D+  ALV DNGSG+ KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 4    EDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 63

Query: 281  RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 460
            RGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP LLTEAPLNPKANREKMTQ
Sbjct: 64   RGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQ 123

Query: 461  IMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 640
            IMFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVTH VPIYEGYALPHAI+RLDLA
Sbjct: 124  IMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLA 183

Query: 641  GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 820
            GRDLTDYLMKILTERGYSF TTAEREIVRDIKEKLCYVALDFE EMATAASSSSLEKSYE
Sbjct: 184  GRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYE 243

Query: 821  LPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSG 1000
            LPDGQVITIGNERFRCPE LFQPSF+GMES GIHETT+NSIMKCD+DIRKDLYAN V+SG
Sbjct: 244  LPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSG 303

Query: 1001 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 1180
            GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI+KQE
Sbjct: 304  GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQE 363

Query: 1181 YDESGPSIVHRKCF 1222
            YDE+GPSIVHRKCF
Sbjct: 364  YDEAGPSIVHRKCF 377


>ref|NP_001017992.1| beta-actin-like protein 2 [Homo sapiens].
          Length = 376

 Score =  711 bits (1835), Expect = 0.0
 Identities = 343/374 (91%), Positives = 362/374 (96%)
 Frame = +2

Query: 101  DDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 280
            D++++ALVVDNGSGMCKAGF GDDAPRAVFPS++GRPRHQGVMVGMGQKD YVGDEAQSK
Sbjct: 3    DNELSALVVDNGSGMCKAGFGGDDAPRAVFPSMIGRPRHQGVMVGMGQKDCYVGDEAQSK 62

Query: 281  RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 460
            RG+LTLKYPIEHG+VTNWDDMEKIW+HTFYNELRVAP+EHP+LLTEAPLNPK NREKMTQ
Sbjct: 63   RGVLTLKYPIEHGVVTNWDDMEKIWYHTFYNELRVAPDEHPILLTEAPLNPKINREKMTQ 122

Query: 461  IMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 640
            IMFE FNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTH VPIYEGYALPHAILRLDLA
Sbjct: 123  IMFEAFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHIVPIYEGYALPHAILRLDLA 182

Query: 641  GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 820
            GRDLTDYLMKILTERGY+FTTTAEREIVRD+KEKLCYVALDFEQEM  AA+SSS E+SYE
Sbjct: 183  GRDLTDYLMKILTERGYNFTTTAEREIVRDVKEKLCYVALDFEQEMVRAAASSSPERSYE 242

Query: 821  LPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSG 1000
            LPDGQVITIGNERFRCPEA+FQPSFLG+ES GIHETTFNSIMKCDVDIRKDLYANTVLSG
Sbjct: 243  LPDGQVITIGNERFRCPEAIFQPSFLGIESSGIHETTFNSIMKCDVDIRKDLYANTVLSG 302

Query: 1001 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 1180
            G+TMYPGIADRMQKEI  LAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE
Sbjct: 303  GSTMYPGIADRMQKEIITLAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 362

Query: 1181 YDESGPSIVHRKCF 1222
            YDE+GP IVHRKCF
Sbjct: 363  YDEAGPPIVHRKCF 376


>ref|NP_001077007.1| POTE ankyrin domain family member E [Homo sapiens].
          Length = 1075

 Score =  704 bits (1816), Expect = 0.0
 Identities = 345/378 (91%), Positives = 357/378 (94%)
 Frame = +2

Query: 89   QFAMDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDE 268
            +  MDDD A LV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPR QG+M GM QK+SYVG E
Sbjct: 698  ELTMDDDTAVLVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRQQGMMGGMHQKESYVGKE 757

Query: 269  AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 448
            AQSKRGILTLKYP+EHGI+TNWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANRE
Sbjct: 758  AQSKRGILTLKYPMEHGIITNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANRE 817

Query: 449  KMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILR 628
            KMTQIMFETFNTPAMYVAIQAV SLY SGRTTGIVMDSGDGVTHTVPIYEG ALPHA LR
Sbjct: 818  KMTQIMFETFNTPAMYVAIQAVPSLYTSGRTTGIVMDSGDGVTHTVPIYEGNALPHATLR 877

Query: 629  LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLE 808
            LDLAGR+L DYLMKILTERGY FTT AEREIVRDIKEKLCYVALDFEQEMATAASSSSLE
Sbjct: 878  LDLAGRELPDYLMKILTERGYRFTTMAEREIVRDIKEKLCYVALDFEQEMATAASSSSLE 937

Query: 809  KSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANT 988
            KSYELPDGQVITIGNERFRCPEALFQP FLGMESCGIHETTFNSIMK DVDIRKDLY NT
Sbjct: 938  KSYELPDGQVITIGNERFRCPEALFQPCFLGMESCGIHETTFNSIMKSDVDIRKDLYTNT 997

Query: 989  VLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 1168
            VLSGGTTMYPG+A RMQKEI ALAPS MKI+IIAPP+RKYSVW+GGSILASLSTFQQMWI
Sbjct: 998  VLSGGTTMYPGMAHRMQKEIAALAPSMMKIRIIAPPKRKYSVWVGGSILASLSTFQQMWI 1057

Query: 1169 SKQEYDESGPSIVHRKCF 1222
            SKQEYDESGPSIVHRKCF
Sbjct: 1058 SKQEYDESGPSIVHRKCF 1075


  Database: RefSeq49_HP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,297,164
  Number of sequences in database:  32,964
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 56,240,151
Number of extensions: 1364611
Number of successful extensions: 5475
Number of sequences better than 1.0e-05: 38
Number of HSP's gapped: 5381
Number of HSP's successfully gapped: 40
Length of query: 598
Length of database: 18,297,164
Length adjustment: 108
Effective length of query: 490
Effective length of database: 14,737,052
Effective search space: 7221155480
Effective search space used: 7221155480
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-000598
         (1794 letters)

Database: RefSeq49_MP.fasta 
           30,036 sequences; 15,617,559 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_031419.1| actin, cytoplasmic 1 [Mus musculus].                 759   0.0  
Alignment   gi|NP_033739.1| actin, cytoplasmic 2 [Mus musculus].                 754   0.0  
Alignment   gi|XP_003084637.1| PREDICTED: actin, cytoplasmic 2-like [Mus mu...   730   0.0  
Alignment   gi|NP_031418.1| actin, aortic smooth muscle [Mus musculus].          724   0.0  
Alignment   gi|NP_033738.1| actin, alpha cardiac muscle 1 [Mus musculus].        722   0.0  
Alignment   gi|NP_033740.2| actin, gamma-enteric smooth muscle [Mus musculu...   720   0.0  
Alignment   gi|NP_033736.1| actin, alpha skeletal muscle [Mus musculus].         720   0.0  
Alignment   gi|NP_780706.1| beta-actin-like protein 2 [Mus musculus].            719   0.0  
Alignment   gi|NP_666219.1| beta-centractin [Mus musculus].                      429   e-120
Alignment   gi|NP_058556.1| alpha-centractin [Mus musculus].                     424   e-119

>ref|NP_031419.1| actin, cytoplasmic 1 [Mus musculus].
          Length = 375

 Score =  759 bits (1960), Expect = 0.0
 Identities = 375/375 (100%), Positives = 375/375 (100%)
 Frame = +2

Query: 98   MDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 277
            MDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
Sbjct: 1    MDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 60

Query: 278  KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 457
            KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 61   KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 120

Query: 458  QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL 637
            QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL
Sbjct: 121  QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL 180

Query: 638  AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY 817
            AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY
Sbjct: 181  AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY 240

Query: 818  ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS 997
            ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS
Sbjct: 241  ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS 300

Query: 998  GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 1177
            GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
Sbjct: 301  GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 360

Query: 1178 EYDESGPSIVHRKCF 1222
            EYDESGPSIVHRKCF
Sbjct: 361  EYDESGPSIVHRKCF 375


>ref|NP_033739.1| actin, cytoplasmic 2 [Mus musculus].
          Length = 375

 Score =  754 bits (1947), Expect = 0.0
 Identities = 371/375 (98%), Positives = 375/375 (100%)
 Frame = +2

Query: 98   MDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 277
            M+++IAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
Sbjct: 1    MEEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 60

Query: 278  KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 457
            KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 61   KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 120

Query: 458  QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL 637
            QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL
Sbjct: 121  QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL 180

Query: 638  AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY 817
            AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY
Sbjct: 181  AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY 240

Query: 818  ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS 997
            ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS
Sbjct: 241  ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS 300

Query: 998  GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 1177
            GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
Sbjct: 301  GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 360

Query: 1178 EYDESGPSIVHRKCF 1222
            EYDESGPSIVHRKCF
Sbjct: 361  EYDESGPSIVHRKCF 375


>ref|XP_003084637.1| PREDICTED: actin, cytoplasmic 2-like [Mus musculus].
          Length = 389

 Score =  730 bits (1885), Expect = 0.0
 Identities = 360/364 (98%), Positives = 364/364 (100%)
 Frame = +2

Query: 98   MDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 277
            M+++IAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
Sbjct: 1    MEEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 60

Query: 278  KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 457
            KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 61   KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 120

Query: 458  QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL 637
            QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL
Sbjct: 121  QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL 180

Query: 638  AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY 817
            AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY
Sbjct: 181  AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY 240

Query: 818  ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS 997
            ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS
Sbjct: 241  ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS 300

Query: 998  GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 1177
            GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
Sbjct: 301  GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 360

Query: 1178 EYDE 1189
            EYDE
Sbjct: 361  EYDE 364


>ref|NP_031418.1| actin, aortic smooth muscle [Mus musculus].
          Length = 377

 Score =  724 bits (1868), Expect = 0.0
 Identities = 352/374 (94%), Positives = 363/374 (97%)
 Frame = +2

Query: 101  DDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 280
            ++D  ALV DNGSG+CKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 4    EEDSTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 63

Query: 281  RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 460
            RGILTLKYPIEHGI+TNWDDMEKIWHH+FYNELRVAPEEHP LLTEAPLNPKANREKMTQ
Sbjct: 64   RGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREKMTQ 123

Query: 461  IMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 640
            IMFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVTH VPIYEGYALPHAI+RLDLA
Sbjct: 124  IMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLA 183

Query: 641  GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 820
            GRDLTDYLMKILTERGYSF TTAEREIVRDIKEKLCYVALDFE EMATAASSSSLEKSYE
Sbjct: 184  GRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYE 243

Query: 821  LPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSG 1000
            LPDGQVITIGNERFRCPE LFQPSF+GMES GIHETT+NSIMKCD+DIRKDLYAN VLSG
Sbjct: 244  LPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSG 303

Query: 1001 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 1180
            GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE
Sbjct: 304  GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 363

Query: 1181 YDESGPSIVHRKCF 1222
            YDE+GPSIVHRKCF
Sbjct: 364  YDEAGPSIVHRKCF 377


>ref|NP_033738.1| actin, alpha cardiac muscle 1 [Mus musculus].
          Length = 377

 Score =  722 bits (1863), Expect = 0.0
 Identities = 352/374 (94%), Positives = 362/374 (96%)
 Frame = +2

Query: 101  DDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 280
            D++  ALV DNGSG+ KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 4    DEETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 63

Query: 281  RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 460
            RGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP LLTEAPLNPKANREKMTQ
Sbjct: 64   RGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQ 123

Query: 461  IMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 640
            IMFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVTH VPIYEGYALPHAI+RLDLA
Sbjct: 124  IMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLA 183

Query: 641  GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 820
            GRDLTDYLMKILTERGYSF TTAEREIVRDIKEKLCYVALDFE EMATAASSSSLEKSYE
Sbjct: 184  GRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYE 243

Query: 821  LPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSG 1000
            LPDGQVITIGNERFRCPE LFQPSF+GMES GIHETT+NSIMKCD+DIRKDLYAN VLSG
Sbjct: 244  LPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSG 303

Query: 1001 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 1180
            GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE
Sbjct: 304  GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 363

Query: 1181 YDESGPSIVHRKCF 1222
            YDE+GPSIVHRKCF
Sbjct: 364  YDEAGPSIVHRKCF 377


>ref|NP_033740.2| actin, gamma-enteric smooth muscle [Mus musculus].
          Length = 376

 Score =  720 bits (1859), Expect = 0.0
 Identities = 350/374 (93%), Positives = 362/374 (96%)
 Frame = +2

Query: 101  DDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 280
            +++  ALV DNGSG+CKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 3    EEETTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 62

Query: 281  RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 460
            RGILTLKYPIEHGI+TNWDDMEKIWHH+FYNELRVAPEEHP LLTEAPLNPKANREKMTQ
Sbjct: 63   RGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREKMTQ 122

Query: 461  IMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 640
            IMFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVTH VPIYEGYALPHAI+RLDLA
Sbjct: 123  IMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLA 182

Query: 641  GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 820
            GRDLTDYLMKILTERGYSF TTAEREIVRDIKEKLCYVALDFE EMATAASSSSLEKSYE
Sbjct: 183  GRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYE 242

Query: 821  LPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSG 1000
            LPDGQVITIGNERFRCPE LFQPSF+GMES GIHETT+NSIMKCD+DIRKDLYAN VLSG
Sbjct: 243  LPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSG 302

Query: 1001 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 1180
            GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK E
Sbjct: 303  GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKPE 362

Query: 1181 YDESGPSIVHRKCF 1222
            YDE+GPSIVHRKCF
Sbjct: 363  YDEAGPSIVHRKCF 376


>ref|NP_033736.1| actin, alpha skeletal muscle [Mus musculus].
          Length = 377

 Score =  720 bits (1858), Expect = 0.0
 Identities = 350/374 (93%), Positives = 362/374 (96%)
 Frame = +2

Query: 101  DDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 280
            +D+  ALV DNGSG+ KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 4    EDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 63

Query: 281  RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 460
            RGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP LLTEAPLNPKANREKMTQ
Sbjct: 64   RGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQ 123

Query: 461  IMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 640
            IMFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVTH VPIYEGYALPHAI+RLDLA
Sbjct: 124  IMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLA 183

Query: 641  GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 820
            GRDLTDYLMKILTERGYSF TTAEREIVRDIKEKLCYVALDFE EMATAASSSSLEKSYE
Sbjct: 184  GRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYE 243

Query: 821  LPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSG 1000
            LPDGQVITIGNERFRCPE LFQPSF+GMES GIHETT+NSIMKCD+DIRKDLYAN V+SG
Sbjct: 244  LPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSG 303

Query: 1001 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 1180
            GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI+KQE
Sbjct: 304  GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQE 363

Query: 1181 YDESGPSIVHRKCF 1222
            YDE+GPSIVHRKCF
Sbjct: 364  YDEAGPSIVHRKCF 377


>ref|NP_780706.1| beta-actin-like protein 2 [Mus musculus].
          Length = 376

 Score =  719 bits (1856), Expect = 0.0
 Identities = 348/375 (92%), Positives = 365/375 (97%)
 Frame = +2

Query: 98   MDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 277
            +DD++ ALVVDNGSGMCKAGF GDDAPRAVFPS+VGRPRHQGVMVGMGQKD YVGDEAQS
Sbjct: 2    VDDELTALVVDNGSGMCKAGFGGDDAPRAVFPSMVGRPRHQGVMVGMGQKDCYVGDEAQS 61

Query: 278  KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 457
            KRGILTLKYPIEHG+VTNWDDMEKIW+HTFYNELRVAP+EHP+LLTEAPLNPK NREKMT
Sbjct: 62   KRGILTLKYPIEHGVVTNWDDMEKIWYHTFYNELRVAPDEHPILLTEAPLNPKINREKMT 121

Query: 458  QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL 637
            QIMFE FNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL
Sbjct: 122  QIMFEAFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL 181

Query: 638  AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY 817
            AGRDLTDYLMKILTERGY+FTTTAEREIVRD+KEKLCYVALDFEQEM TAA+SSSLE+SY
Sbjct: 182  AGRDLTDYLMKILTERGYNFTTTAEREIVRDVKEKLCYVALDFEQEMVTAAASSSLERSY 241

Query: 818  ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS 997
            ELPDGQVITIGNERFRCPEA+FQPSFLG+ES GIHETTFNSIMKCDVDIRKDL+ANTVLS
Sbjct: 242  ELPDGQVITIGNERFRCPEAIFQPSFLGIESRGIHETTFNSIMKCDVDIRKDLFANTVLS 301

Query: 998  GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 1177
            GG+TMYPGIADRMQKEI  LAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
Sbjct: 302  GGSTMYPGIADRMQKEIVTLAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 361

Query: 1178 EYDESGPSIVHRKCF 1222
            EYDE+GP IVHRKCF
Sbjct: 362  EYDEAGPPIVHRKCF 376


>ref|NP_666219.1| beta-centractin [Mus musculus].
          Length = 376

 Score =  429 bits (1104), Expect = e-120
 Identities = 199/369 (53%), Positives = 276/369 (74%), Gaps = 1/369 (0%)
 Frame = +2

Query: 119  LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 298
            +V+DNGSG+ KAGFAGD  P+  FP+ VGRP+H  VM G  + D ++G +A+  RG+LT+
Sbjct: 12   VVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHMRVMAGALEGDLFIGPKAEEHRGLLTI 71

Query: 299  KYPIEHGIVTNWDDMEKIWHHTFY-NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 475
            +YP+EHG+V +W+DME+IW + +  ++L+   EEHPVLLTEAPLNP  NREK  ++ FET
Sbjct: 72   RYPMEHGVVRDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPSKNREKAAEVFFET 131

Query: 476  FNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLT 655
            FN PA+++++QAVLSLYA+GRTTG+V+DSGDGVTH VPIYEG+A+PH+I+R+D+AGRD++
Sbjct: 132  FNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRVDIAGRDVS 191

Query: 656  DYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQ 835
             YL  +L + G  F T+AE E+VR IKE+ CY++++ +++ A        +  Y LPDG 
Sbjct: 192  RYLRLLLRKEGADFHTSAEFEVVRTIKERACYLSINPQKDEALETE----KVQYTLPDGS 247

Query: 836  VITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMY 1015
             + +G  RFR PE LFQP  +G ES G+HE    +I K D+D+R+ L++N VLSGG+T++
Sbjct: 248  TLDVGPARFRAPELLFQPDLVGDESEGLHEVLAFAIHKSDMDLRRTLFSNIVLSGGSTLF 307

Query: 1016 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 1195
             G  DR+  E+  LAP  +KIKI AP ER YS WIGGSILASL TF++MW+SK+EY+E G
Sbjct: 308  KGFGDRLLSEVKKLAPKDVKIKISAPQERLYSTWIGGSILASLDTFKKMWVSKKEYEEDG 367

Query: 1196 PSIVHRKCF 1222
               +HRK F
Sbjct: 368  SRAIHRKTF 376


>ref|NP_058556.1| alpha-centractin [Mus musculus].
          Length = 376

 Score =  424 bits (1091), Expect = e-119
 Identities = 196/369 (53%), Positives = 276/369 (74%), Gaps = 1/369 (0%)
 Frame = +2

Query: 119  LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 298
            +V+DNGSG+ KAGFAGD  P+  FP+ VGRP+H  VM G  + D ++G +A+  RG+L++
Sbjct: 12   VVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHVRVMAGALEGDIFIGPKAEEHRGLLSI 71

Query: 299  KYPIEHGIVTNWDDMEKIWHHTFY-NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 475
            +YP+EHGIV +W+DME+IW + +  ++L+   EEHPVLLTEAPLNP+ NRE+  ++ FET
Sbjct: 72   RYPMEHGIVKDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPRKNRERAAEVFFET 131

Query: 476  FNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLT 655
            FN PA+++++QAVLSLYA+GRTTG+V+DSGDGVTH VPIYEG+A+PH+I+R+D+AGRD++
Sbjct: 132  FNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRIDIAGRDVS 191

Query: 656  DYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQ 835
             +L   L + GY F +++E EIV+ IKE+ CY++++ +++       +     Y LPDG 
Sbjct: 192  RFLRLYLRKEGYDFHSSSEFEIVKAIKERACYLSINPQKDETLETEKA----QYYLPDGS 247

Query: 836  VITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMY 1015
             I IG  RFR PE LF+P  +G ES GIHE    +I K D+D+R+ L++N VLSGG+T++
Sbjct: 248  TIEIGPSRFRAPELLFRPDLIGEESEGIHEVLVFAIQKSDMDLRRTLFSNIVLSGGSTLF 307

Query: 1016 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 1195
             G  DR+  E+  LAP  +KI+I AP ER YS WIGGSILASL TF++MW+SK+EY+E G
Sbjct: 308  KGFGDRLLSEVKKLAPKDVKIRISAPQERLYSTWIGGSILASLDTFKKMWVSKKEYEEDG 367

Query: 1196 PSIVHRKCF 1222
               +HRK F
Sbjct: 368  ARSIHRKTF 376


  Database: RefSeq49_MP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 15,617,559
  Number of sequences in database:  30,036
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 47,416,325
Number of extensions: 1133659
Number of successful extensions: 4398
Number of sequences better than 1.0e-05: 30
Number of HSP's gapped: 4292
Number of HSP's successfully gapped: 31
Length of query: 598
Length of database: 15,617,559
Length adjustment: 107
Effective length of query: 491
Effective length of database: 12,403,707
Effective search space: 6090220137
Effective search space used: 6090220137
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-000598
         (1794 letters)

Database: RefSeq49_SP.fasta 
           24,897 sequences; 11,343,932 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_003124328.1| PREDICTED: actin, cytoplasmic 1 [Sus scrofa].     759   0.0  
Alignment   gi|XP_003357976.1| PREDICTED: actin, cytoplasmic 2 [Sus scrofa].     754   0.0  
Alignment   gi|NP_001158122.1| actin, aortic smooth muscle [Sus scrofa].         724   0.0  
Alignment   gi|NP_001163988.1| actin, alpha cardiac muscle 1 [Sus scrofa].       722   0.0  
Alignment   gi|NP_001161267.1| actin, alpha skeletal muscle [Sus scrofa].        720   0.0  
Alignment   gi|XP_003121682.1| PREDICTED: actin, alpha cardiac muscle 1-lik...   720   0.0  
Alignment   gi|XP_003353462.1| PREDICTED: actin, alpha cardiac muscle 1-lik...   611   e-175
Alignment   gi|XP_003354819.1| PREDICTED: actin, gamma-enteric smooth muscl...   472   e-133
Alignment   gi|XP_003125076.2| PREDICTED: actin, gamma-enteric smooth muscl...   433   e-121
Alignment   gi|XP_001928912.1| PREDICTED: alpha-centractin [Sus scrofa].         424   e-119

>ref|XP_003124328.1| PREDICTED: actin, cytoplasmic 1 [Sus scrofa].
          Length = 375

 Score =  759 bits (1960), Expect = 0.0
 Identities = 375/375 (100%), Positives = 375/375 (100%)
 Frame = +2

Query: 98   MDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 277
            MDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
Sbjct: 1    MDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 60

Query: 278  KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 457
            KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 61   KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 120

Query: 458  QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL 637
            QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL
Sbjct: 121  QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL 180

Query: 638  AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY 817
            AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY
Sbjct: 181  AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY 240

Query: 818  ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS 997
            ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS
Sbjct: 241  ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS 300

Query: 998  GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 1177
            GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
Sbjct: 301  GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 360

Query: 1178 EYDESGPSIVHRKCF 1222
            EYDESGPSIVHRKCF
Sbjct: 361  EYDESGPSIVHRKCF 375


>ref|XP_003357976.1| PREDICTED: actin, cytoplasmic 2 [Sus scrofa].
          Length = 375

 Score =  754 bits (1947), Expect = 0.0
 Identities = 371/375 (98%), Positives = 375/375 (100%)
 Frame = +2

Query: 98   MDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 277
            M+++IAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
Sbjct: 1    MEEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 60

Query: 278  KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 457
            KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 61   KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 120

Query: 458  QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL 637
            QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL
Sbjct: 121  QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL 180

Query: 638  AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY 817
            AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY
Sbjct: 181  AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY 240

Query: 818  ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS 997
            ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS
Sbjct: 241  ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS 300

Query: 998  GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 1177
            GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
Sbjct: 301  GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 360

Query: 1178 EYDESGPSIVHRKCF 1222
            EYDESGPSIVHRKCF
Sbjct: 361  EYDESGPSIVHRKCF 375


>ref|NP_001158122.1| actin, aortic smooth muscle [Sus scrofa].
          Length = 377

 Score =  724 bits (1868), Expect = 0.0
 Identities = 352/374 (94%), Positives = 363/374 (97%)
 Frame = +2

Query: 101  DDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 280
            ++D  ALV DNGSG+CKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 4    EEDSTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 63

Query: 281  RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 460
            RGILTLKYPIEHGI+TNWDDMEKIWHH+FYNELRVAPEEHP LLTEAPLNPKANREKMTQ
Sbjct: 64   RGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREKMTQ 123

Query: 461  IMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 640
            IMFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVTH VPIYEGYALPHAI+RLDLA
Sbjct: 124  IMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLA 183

Query: 641  GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 820
            GRDLTDYLMKILTERGYSF TTAEREIVRDIKEKLCYVALDFE EMATAASSSSLEKSYE
Sbjct: 184  GRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYE 243

Query: 821  LPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSG 1000
            LPDGQVITIGNERFRCPE LFQPSF+GMES GIHETT+NSIMKCD+DIRKDLYAN VLSG
Sbjct: 244  LPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSG 303

Query: 1001 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 1180
            GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE
Sbjct: 304  GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 363

Query: 1181 YDESGPSIVHRKCF 1222
            YDE+GPSIVHRKCF
Sbjct: 364  YDEAGPSIVHRKCF 377


>ref|NP_001163988.1| actin, alpha cardiac muscle 1 [Sus scrofa].
          Length = 377

 Score =  722 bits (1863), Expect = 0.0
 Identities = 352/374 (94%), Positives = 362/374 (96%)
 Frame = +2

Query: 101  DDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 280
            D++  ALV DNGSG+ KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 4    DEETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 63

Query: 281  RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 460
            RGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP LLTEAPLNPKANREKMTQ
Sbjct: 64   RGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQ 123

Query: 461  IMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 640
            IMFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVTH VPIYEGYALPHAI+RLDLA
Sbjct: 124  IMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLA 183

Query: 641  GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 820
            GRDLTDYLMKILTERGYSF TTAEREIVRDIKEKLCYVALDFE EMATAASSSSLEKSYE
Sbjct: 184  GRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYE 243

Query: 821  LPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSG 1000
            LPDGQVITIGNERFRCPE LFQPSF+GMES GIHETT+NSIMKCD+DIRKDLYAN VLSG
Sbjct: 244  LPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSG 303

Query: 1001 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 1180
            GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE
Sbjct: 304  GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 363

Query: 1181 YDESGPSIVHRKCF 1222
            YDE+GPSIVHRKCF
Sbjct: 364  YDEAGPSIVHRKCF 377


>ref|NP_001161267.1| actin, alpha skeletal muscle [Sus scrofa].
          Length = 377

 Score =  720 bits (1858), Expect = 0.0
 Identities = 350/374 (93%), Positives = 362/374 (96%)
 Frame = +2

Query: 101  DDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 280
            +D+  ALV DNGSG+ KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 4    EDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 63

Query: 281  RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 460
            RGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP LLTEAPLNPKANREKMTQ
Sbjct: 64   RGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQ 123

Query: 461  IMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 640
            IMFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVTH VPIYEGYALPHAI+RLDLA
Sbjct: 124  IMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLA 183

Query: 641  GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 820
            GRDLTDYLMKILTERGYSF TTAEREIVRDIKEKLCYVALDFE EMATAASSSSLEKSYE
Sbjct: 184  GRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYE 243

Query: 821  LPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSG 1000
            LPDGQVITIGNERFRCPE LFQPSF+GMES GIHETT+NSIMKCD+DIRKDLYAN V+SG
Sbjct: 244  LPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSG 303

Query: 1001 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 1180
            GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI+KQE
Sbjct: 304  GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQE 363

Query: 1181 YDESGPSIVHRKCF 1222
            YDE+GPSIVHRKCF
Sbjct: 364  YDEAGPSIVHRKCF 377


>ref|XP_003121682.1| PREDICTED: actin, alpha cardiac muscle 1-like isoform 1 [Sus scrofa].
          Length = 377

 Score =  720 bits (1858), Expect = 0.0
 Identities = 351/374 (93%), Positives = 362/374 (96%)
 Frame = +2

Query: 101  DDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 280
            D++  ALV DNGSG+ KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 4    DEETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 63

Query: 281  RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 460
            RGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP LLTEAPLNPKANREKMTQ
Sbjct: 64   RGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQ 123

Query: 461  IMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 640
            IMFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVTH VPIYEGYALPHAI+RLDLA
Sbjct: 124  IMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLA 183

Query: 641  GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 820
            GRDLTDYLMKILTERGYSF TTAEREIVRDIKEKLC+VALDFE EMATAASSSSLEKSYE
Sbjct: 184  GRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCHVALDFENEMATAASSSSLEKSYE 243

Query: 821  LPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSG 1000
            LPDGQVITIGNERFRCPE LFQPSF+GMES GIHETT+NSIMKCD+DIRKDLYAN VLSG
Sbjct: 244  LPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSG 303

Query: 1001 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 1180
            GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE
Sbjct: 304  GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 363

Query: 1181 YDESGPSIVHRKCF 1222
            YDE+GPSIVHRKCF
Sbjct: 364  YDEAGPSIVHRKCF 377


>ref|XP_003353462.1| PREDICTED: actin, alpha cardiac muscle 1-like isoform 2 [Sus scrofa].
          Length = 334

 Score =  611 bits (1576), Expect = e-175
 Identities = 309/374 (82%), Positives = 319/374 (85%)
 Frame = +2

Query: 101  DDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 280
            D++  ALV DNGSG+ KAGFAGDDAPRAVFPSIVGRPRHQ                    
Sbjct: 4    DEETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQ-------------------- 43

Query: 281  RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 460
                                   IWHHTFYNELRVAPEEHP LLTEAPLNPKANREKMTQ
Sbjct: 44   -----------------------IWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQ 80

Query: 461  IMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 640
            IMFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVTH VPIYEGYALPHAI+RLDLA
Sbjct: 81   IMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLA 140

Query: 641  GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 820
            GRDLTDYLMKILTERGYSF TTAEREIVRDIKEKLC+VALDFE EMATAASSSSLEKSYE
Sbjct: 141  GRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCHVALDFENEMATAASSSSLEKSYE 200

Query: 821  LPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSG 1000
            LPDGQVITIGNERFRCPE LFQPSF+GMES GIHETT+NSIMKCD+DIRKDLYAN VLSG
Sbjct: 201  LPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSG 260

Query: 1001 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 1180
            GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE
Sbjct: 261  GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 320

Query: 1181 YDESGPSIVHRKCF 1222
            YDE+GPSIVHRKCF
Sbjct: 321  YDEAGPSIVHRKCF 334


>ref|XP_003354819.1| PREDICTED: actin, gamma-enteric smooth muscle-like [Sus scrofa].
          Length = 313

 Score =  472 bits (1215), Expect = e-133
 Identities = 231/247 (93%), Positives = 239/247 (96%)
 Frame = +2

Query: 344  EKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSL 523
            E+IWHH+FYNELRVAPEEHP LLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSL
Sbjct: 36   EQIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSL 95

Query: 524  YASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT 703
            YASGRTTGIV+DSGDGVTH VPIYEGYALPHAI+RLDLAGRDLTDYLMKILTERGYSF T
Sbjct: 96   YASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVT 155

Query: 704  TAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALF 883
            TAEREIVRDIKEKLCYVALDFE EMATAASSSSLEKSYELPDGQVITIGNERFRCPE LF
Sbjct: 156  TAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQVITIGNERFRCPETLF 215

Query: 884  QPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP 1063
            QPSF+GMES GIHETT+NSIMKCD+DIRKDLYAN VLSGGTTMYPGIADRMQKEITALAP
Sbjct: 216  QPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSGGTTMYPGIADRMQKEITALAP 275

Query: 1064 STMKIKI 1084
            STMKIK+
Sbjct: 276  STMKIKV 282


>ref|XP_003125076.2| PREDICTED: actin, gamma-enteric smooth muscle-like [Sus scrofa].
          Length = 268

 Score =  433 bits (1113), Expect = e-121
 Identities = 212/225 (94%), Positives = 218/225 (96%)
 Frame = +2

Query: 548  IVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR 727
            IV+DSGDGVTH VPIYEGYALPHAI+RLDLAGRDLTDYLMKILTERGYSF TTAEREIVR
Sbjct: 44   IVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVR 103

Query: 728  DIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGME 907
            DIKEKLCYVALDFE EMATAASSSSLEKSYELPDGQVITIGNERFRCPE LFQPSF+GME
Sbjct: 104  DIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQVITIGNERFRCPETLFQPSFIGME 163

Query: 908  SCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKII 1087
            S GIHETT+NSIMKCD+DIRKDLYAN VLSGGTTMYPGIADRMQKEITALAPSTMKIKII
Sbjct: 164  SAGIHETTYNSIMKCDIDIRKDLYANNVLSGGTTMYPGIADRMQKEITALAPSTMKIKII 223

Query: 1088 APPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 1222
            APPERKYSVWIGGSILASLSTFQQMWISK EYDE+GPSIVHRKCF
Sbjct: 224  APPERKYSVWIGGSILASLSTFQQMWISKPEYDEAGPSIVHRKCF 268


>ref|XP_001928912.1| PREDICTED: alpha-centractin [Sus scrofa].
          Length = 376

 Score =  424 bits (1091), Expect = e-119
 Identities = 196/369 (53%), Positives = 276/369 (74%), Gaps = 1/369 (0%)
 Frame = +2

Query: 119  LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 298
            +V+DNGSG+ KAGFAGD  P+  FP+ VGRP+H  VM G  + D ++G +A+  RG+L++
Sbjct: 12   VVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHVRVMAGALEGDIFIGPKAEEHRGLLSI 71

Query: 299  KYPIEHGIVTNWDDMEKIWHHTFY-NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 475
            +YP+EHGIV +W+DME+IW + +  ++L+   EEHPVLLTEAPLNP+ NRE+  ++ FET
Sbjct: 72   RYPMEHGIVKDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPRKNRERAAEVFFET 131

Query: 476  FNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLT 655
            FN PA+++++QAVLSLYA+GRTTG+V+DSGDGVTH VPIYEG+A+PH+I+R+D+AGRD++
Sbjct: 132  FNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRIDIAGRDVS 191

Query: 656  DYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQ 835
             +L   L + GY F +++E EIV+ IKE+ CY++++ +++       +     Y LPDG 
Sbjct: 192  RFLRLYLRKEGYDFHSSSEFEIVKAIKERACYLSINPQKDETLETEKA----QYYLPDGS 247

Query: 836  VITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMY 1015
             I IG  RFR PE LF+P  +G ES GIHE    +I K D+D+R+ L++N VLSGG+T++
Sbjct: 248  TIEIGPSRFRAPELLFRPDLIGEESEGIHEVLVFAIQKSDMDLRRTLFSNIVLSGGSTLF 307

Query: 1016 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 1195
             G  DR+  E+  LAP  +KI+I AP ER YS WIGGSILASL TF++MW+SK+EY+E G
Sbjct: 308  KGFGDRLLSEVKKLAPKDVKIRISAPQERLYSTWIGGSILASLDTFKKMWVSKKEYEEDG 367

Query: 1196 PSIVHRKCF 1222
               +HRK F
Sbjct: 368  ARSIHRKTF 376


  Database: RefSeq49_SP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 11,343,932
  Number of sequences in database:  24,897
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 36,291,806
Number of extensions: 1006212
Number of successful extensions: 3850
Number of sequences better than 1.0e-05: 29
Number of HSP's gapped: 3774
Number of HSP's successfully gapped: 32
Length of query: 598
Length of database: 11,343,932
Length adjustment: 105
Effective length of query: 493
Effective length of database: 8,729,747
Effective search space: 4303765271
Effective search space used: 4303765271
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

BLASTN 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-000598
         (1794 letters)

Database: Sscrofa_10.2.fasta 
           4582 sequences; 2,808,509,378 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Sscrofa_Chr03                                                         880   0.0  
Sscrofa_Chr12                                                         771   0.0  
Sscrofa_Chr16                                                         597   e-168
Sscrofa_Chr13                                                         476   e-131
Sscrofa_Chr14                                                         424   e-116
Sscrofa_Chr01                                                         359   3e-96
gb|GL894474.1| Sus scrofa unplaced genomic scaffold chrU_scaffol...    64   3e-07
Sscrofa_Chr18                                                          62   1e-06

>Sscrofa_Chr03 
||          Length = 144787322

 Score =  880 bits (444), Expect = 0.0
 Identities = 444/444 (100%)
 Strand = Plus / Minus

                                                                           
Query: 457     ccagatcatgttcgagaccttcaacaccccagccatgtacgtggccatccaggccgtgct 516
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4730916 ccagatcatgttcgagaccttcaacaccccagccatgtacgtggccatccaggccgtgct 4730857

                                                                           
Query: 517     gtccctgtacgcctctggccgcaccactggcatcgtgatggactccggagacggggtcac 576
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4730856 gtccctgtacgcctctggccgcaccactggcatcgtgatggactccggagacggggtcac 4730797

                                                                           
Query: 577     ccacacggtgcccatctacgaggggtacgccctgccccacgccatcctgcgtctggacct 636
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4730796 ccacacggtgcccatctacgaggggtacgccctgccccacgccatcctgcgtctggacct 4730737

                                                                           
Query: 637     ggctggccgggacctgaccgactacctcatgaagatcctgacggagcggggctacagctt 696
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4730736 ggctggccgggacctgaccgactacctcatgaagatcctgacggagcggggctacagctt 4730677

                                                                           
Query: 697     caccaccacggccgagcgggagatcgtgcgggacatcaaggagaagctgtgctacgtcgc 756
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4730676 caccaccacggccgagcgggagatcgtgcgggacatcaaggagaagctgtgctacgtcgc 4730617

                                                                           
Query: 757     cctggacttcgagcaggagatggccactgccgcgtcctcctcctccctggagaagagcta 816
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4730616 cctggacttcgagcaggagatggccactgccgcgtcctcctcctccctggagaagagcta 4730557

                                                                           
Query: 817     cgagctgcccgacggccaggtcatcaccatcggcaacgagcgcttccgctgccccgaggc 876
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4730556 cgagctgcccgacggccaggtcatcaccatcggcaacgagcgcttccgctgccccgaggc 4730497

                                       
Query: 877     gctcttccagccctccttcctggg 900
               ||||||||||||||||||||||||
Sbjct: 4730496 gctcttccagccctccttcctggg 4730473



 Score =  482 bits (243), Expect = e-133
 Identities = 243/243 (100%)
 Strand = Plus / Minus

                                                                           
Query: 218     cagggcgtgatggtgggcatgggccagaaggactcctacgtgggggacgaggcccagagc 277
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4731602 cagggcgtgatggtgggcatgggccagaaggactcctacgtgggggacgaggcccagagc 4731543

                                                                           
Query: 278     aagagaggcatcctgaccctcaagtaccccatcgagcacggcatcgtcaccaactgggac 337
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4731542 aagagaggcatcctgaccctcaagtaccccatcgagcacggcatcgtcaccaactgggac 4731483

                                                                           
Query: 338     gacatggagaagatctggcaccacaccttctacaacgagctgcgtgtggcccccgaggag 397
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4731482 gacatggagaagatctggcaccacaccttctacaacgagctgcgtgtggcccccgaggag 4731423

                                                                           
Query: 398     caccccgtgctgctgaccgaggcccccctgaaccccaaagccaaccgtgagaagatgacc 457
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4731422 caccccgtgctgctgaccgaggcccccctgaaccccaaagccaaccgtgagaagatgacc 4731363

                  
Query: 458     cag 460
               |||
Sbjct: 4731362 cag 4731360



 Score =  456 bits (230), Expect = e-125
 Identities = 230/230 (100%)
 Strand = Plus / Minus

                                                                           
Query: 1080    agatcatcgcgcctccagagcgcaagtactccgtgtggatcggcggctccatcctggcct 1139
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4730065 agatcatcgcgcctccagagcgcaagtactccgtgtggatcggcggctccatcctggcct 4730006

                                                                           
Query: 1140    cgctgtccaccttccagcagatgtggatcagcaagcaggagtacgacgagtccggcccct 1199
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4730005 cgctgtccaccttccagcagatgtggatcagcaagcaggagtacgacgagtccggcccct 4729946

                                                                           
Query: 1200    ccatcgtccaccgcaaatgcttctaggcggactgttagttgcattccacctttttcttga 1259
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4729945 ccatcgtccaccgcaaatgcttctaggcggactgttagttgcattccacctttttcttga 4729886

                                                                 
Query: 1260    caaaacctaacttgcgcagaaaatgagatgagattggcatggctttattt 1309
               ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4729885 caaaacctaacttgcgcagaaaatgagatgagattggcatggctttattt 4729836



 Score =  363 bits (183), Expect = 2e-97
 Identities = 183/183 (100%)
 Strand = Plus / Minus

                                                                           
Query: 899     ggcatggaatcctgcggcatccacgaaactaccttcaactccatcatgaagtgcgacgtc 958
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4730376 ggcatggaatcctgcggcatccacgaaactaccttcaactccatcatgaagtgcgacgtc 4730317

                                                                           
Query: 959     gacatccgcaaggacctctacgccaacacggtgctgtcgggtggcaccaccatgtaccca 1018
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4730316 gacatccgcaaggacctctacgccaacacggtgctgtcgggtggcaccaccatgtaccca 4730257

                                                                           
Query: 1019    ggcatcgccgacaggatgcagaaggagatcacggccctggcgcccagcacgatgaagatc 1078
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4730256 ggcatcgccgacaggatgcagaaggagatcacggccctggcgcccagcacgatgaagatc 4730197

                  
Query: 1079    aag 1081
               |||
Sbjct: 4730196 aag 4730194



 Score =  264 bits (133), Expect = 2e-67
 Identities = 133/133 (100%)
 Strand = Plus / Minus

                                                                           
Query: 89      cagttcgccatggatgacgatattgctgcgctcgtggtcgacaacggctccggcatgtgc 148
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4731863 cagttcgccatggatgacgatattgctgcgctcgtggtcgacaacggctccggcatgtgc 4731804

                                                                           
Query: 149     aaggccggctttgcgggcgacgatgctccccgggccgtcttcccctccatcgtggggcgc 208
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4731803 aaggccggctttgcgggcgacgatgctccccgggccgtcttcccctccatcgtggggcgc 4731744

                            
Query: 209     ccccgacaccagg 221
               |||||||||||||
Sbjct: 4731743 ccccgacaccagg 4731731



 Score =  220 bits (111), Expect = 2e-54
 Identities = 111/111 (100%)
 Strand = Plus / Minus

                                                                           
Query: 1369    cgcttgactcaggatttaaaaactggaacggtgaaggtgacagcagtcggttggatggag 1428
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4729776 cgcttgactcaggatttaaaaactggaacggtgaaggtgacagcagtcggttggatggag 4729717

                                                                  
Query: 1429    catcccccaaagttttacaatgtggccgaggactttgattgtacattgttc 1479
               |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4729716 catcccccaaagttttacaatgtggccgaggactttgattgtacattgttc 4729666



 Score =  216 bits (109), Expect = 3e-53
 Identities = 160/177 (90%)
 Strand = Plus / Minus

                                                                            
Query: 719      atcgtgcgggacatcaaggagaagctgtgctacgtcgccctggacttcgagcaggagatg 778
                |||||||| ||||||||||||||||||||||| || ||||||||||| ||| | ||||||
Sbjct: 72256562 atcgtgcgagacatcaaggagaagctgtgctatgtggccctggactttgagaacgagatg 72256503

                                                                            
Query: 779      gccactgccgcgtcctcctcctccctggagaagagctacgagctgcccgacggccaggtc 838
                ||||| || || ||||| |||||||||||||||||||| |||||||| ||||| ||||||
Sbjct: 72256502 gccacggcagcctcctcttcctccctggagaagagctatgagctgccggacggacaggtc 72256443

                                                                         
Query: 839      atcaccatcggcaacgagcgcttccgctgccccgaggcgctcttccagccctccttc 895
                |||||||||||||| ||||||||||||||||| ||| | ||||||||||||||||||
Sbjct: 72256442 atcaccatcggcaatgagcgcttccgctgcccggagaccctcttccagccctccttc 72256386



 Score =  167 bits (84), Expect = 3e-38
 Identities = 84/84 (100%)
 Strand = Plus / Minus

                                                                           
Query: 8       acagccgagaccgcgtccactccgccagcacaggcccctcgcccttgccgctccgccttc 67
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4732657 acagccgagaccgcgtccactccgccagcacaggcccctcgcccttgccgctccgccttc 4732598

                                       
Query: 68      gccgccggtctacaccgctaccag 91
               ||||||||||||||||||||||||
Sbjct: 4732597 gccgccggtctacaccgctaccag 4732574



 Score =  125 bits (63), Expect = 9e-26
 Identities = 135/159 (84%)
 Strand = Plus / Minus

                                                                            
Query: 923      gaaactaccttcaactccatcatgaagtgcgacgtcgacatccgcaaggacctctacgcc 982
                ||||| |||| ||| |||||||||||||| ||| | ||||||||||| ||| | ||||||
Sbjct: 72255320 gaaacaacctacaattccatcatgaagtgtgacattgacatccgcaaagacttatacgcc 72255261

                                                                            
Query: 983      aacacggtgctgtcgggtggcaccaccatgtacccaggcatcgccgacaggatgcagaag 1042
                ||||  || || || || || ||||| ||||| || ||||| ||||||||||||||||||
Sbjct: 72255260 aacaacgtcctctctgggggtaccactatgtatcctggcattgccgacaggatgcagaag 72255201

                                                       
Query: 1043     gagatcacggccctggcgcccagcacgatgaagatcaag 1081
                |||||||| |||||||| ||||| || ||||||||||||
Sbjct: 72255200 gagatcacagccctggcccccagtaccatgaagatcaag 72255162



 Score =  119 bits (60), Expect = 6e-24
 Identities = 114/132 (86%)
 Strand = Plus / Minus

                                                                            
Query: 1094     ccagagcgcaagtactccgtgtggatcggcggctccatcctggcctcgctgtccaccttc 1153
                |||||||| |||||||| || |||||||| ||||| ||||||||||| || |||||||||
Sbjct: 72252081 ccagagcggaagtactcggtctggatcggaggctctatcctggcctctctctccaccttc 72252022

                                                                            
Query: 1154     cagcagatgtggatcagcaagcaggagtacgacgagtccggcccctccatcgtccaccgc 1213
                ||||||||||||||||||||||  ||||| |||||| | || || ||||| |||||| | 
Sbjct: 72252021 cagcagatgtggatcagcaagccagagtatgacgaggcagggccttccattgtccacagg 72251962

                            
Query: 1214     aaatgcttctag 1225
                || |||||||||
Sbjct: 72251961 aagtgcttctag 72251950



 Score =  109 bits (55), Expect = 5e-21
 Identities = 112/131 (85%)
 Strand = Plus / Minus

                                                                            
Query: 545      ggcatcgtgatggactccggagacggggtcacccacacggtgcccatctacgaggggtac 604
                ||||||||  |||| ||||| || || ||||||||||  || || ||||| ||||| |||
Sbjct: 72257787 ggcatcgtcctggattccggggatggcgtcacccacaatgtccctatctatgagggatac 72257728

                                                                            
Query: 605      gccctgccccacgccatcctgcgtctggacctggctggccgggacctgaccgactacctc 664
                || ||||||||||||||| |||| ||||| ||||||||||| ||||| || |||||||||
Sbjct: 72257727 gcactgccccacgccatcatgcgcctggatctggctggccgcgacctcacggactacctc 72257668

                           
Query: 665      atgaagatcct 675
                |||||||||||
Sbjct: 72257667 atgaagatcct 72257657



 Score =  105 bits (53), Expect = 8e-20
 Identities = 98/113 (86%)
 Strand = Plus / Minus

                                                                            
Query: 348      agatctggcaccacaccttctacaacgagctgcgtgtggcccccgaggagcaccccgtgc 407
                |||||||||||||| ||||||||||||||||||| || || || ||||||||||||   |
Sbjct: 72310107 agatctggcaccactccttctacaacgagctgcgggtagcacctgaggagcaccccaccc 72310048

                                                                     
Query: 408      tgctgaccgaggcccccctgaaccccaaagccaaccgtgagaagatgacccag 460
                |||| || ||||||||||| || ||||| |||||| | |||||||||||||||
Sbjct: 72310047 tgctcacggaggcccccctaaatcccaaggccaacagggagaagatgacccag 72309995



 Score = 95.6 bits (48), Expect = 8e-17
 Identities = 57/60 (95%)
 Strand = Plus / Minus

                                                                           
Query: 1510    agtccttccaagtatcatgaaatgcattgttacaggaagtccctgcctttccaaaagctg 1569
               |||| ||||||||||||||| |||||||||||||||||||||||||||| ||||||||||
Sbjct: 4729635 agtcattccaagtatcatgagatgcattgttacaggaagtccctgccttcccaaaagctg 4729576


>Sscrofa_Chr12 
||          Length = 63588571

 Score =  771 bits (389), Expect = 0.0
 Identities = 431/445 (96%)
 Strand = Plus / Plus

                                                                           
Query: 456     cccagatcatgttcgagaccttcaacaccccagccatgtacgtggccatccaggccgtgc 515
               |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 1164341 cccagatcatgttcgagaccttcaacacgccggccatgtacgtggccatccaggccgtgc 1164400

                                                                           
Query: 516     tgtccctgtacgcctctggccgcaccactggcatcgtgatggactccggagacggggtca 575
               |||||||||||||||||||||||||||||||||| || |||||||| || || |||||||
Sbjct: 1164401 tgtccctgtacgcctctggccgcaccactggcattgtcatggactctggggatggggtca 1164460

                                                                           
Query: 576     cccacacggtgcccatctacgaggggtacgccctgccccacgccatcctgcgtctggacc 635
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1164461 cccacacggtgcccatctacgaggggtacgccctgccccacgccatcctgcgtctggacc 1164520

                                                                           
Query: 636     tggctggccgggacctgaccgactacctcatgaagatcctgacggagcggggctacagct 695
               |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1164521 tggctggccgggacctgaccgactacctcatgaagatcctcacggagcggggctacagct 1164580

                                                                           
Query: 696     tcaccaccacggccgagcgggagatcgtgcgggacatcaaggagaagctgtgctacgtcg 755
               ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 1164581 tcaccaccacggccgagcgggagatcgtgcgggacatcaaggagaagctctgctacgtcg 1164640

                                                                           
Query: 756     ccctggacttcgagcaggagatggccactgccgcgtcctcctcctccctggagaagagct 815
               |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 1164641 ccctggacttcgagcaggagatggccaccgccgcgtcctcctcctccctggagaagagct 1164700

                                                                           
Query: 816     acgagctgcccgacggccaggtcatcaccatcggcaacgagcgcttccgctgccccgagg 875
               ||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||
Sbjct: 1164701 acgagctgcccgacggccaggtcatcaccatcggcaacgagcgcttccggtgtccagagg 1164760

                                        
Query: 876     cgctcttccagccctccttcctggg 900
               |||||||||||||||||||| ||||
Sbjct: 1164761 cgctcttccagccctccttcttggg 1164785



 Score =  452 bits (228), Expect = e-124
 Identities = 330/364 (90%)
 Strand = Plus / Plus

                                                                           
Query: 93      tcgccatggatgacgatattgctgcgctcgtggtcgacaacggctccggcatgtgcaagg 152
               |||||||||| || || || || ||||| ||  ||||||| ||||||||||||||||| |
Sbjct: 1163688 tcgccatggaagaagagatcgccgcgctggtcatcgacaatggctccggcatgtgcaaag 1163747

                                                                           
Query: 153     ccggctttgcgggcgacgatgctccccgggccgtcttcccctccatcgtggggcgccccc 212
               | |||||||| || || || || ||||||||||| ||||| |||||||| ||||| ||||
Sbjct: 1163748 ctggctttgctggggatgacgccccccgggccgtgttcccgtccatcgtcgggcgtcccc 1163807

                                                                           
Query: 213     gacaccagggcgtgatggtgggcatgggccagaaggactcctacgtgggggacgaggccc 272
               |||||||||| || ||||||||||||||||||||||||  ||||||||| |||||||| |
Sbjct: 1163808 gacaccagggtgtcatggtgggcatgggccagaaggacagctacgtgggcgacgaggctc 1163867

                                                                           
Query: 273     agagcaagagaggcatcctgaccctcaagtaccccatcgagcacggcatcgtcaccaact 332
               |||||||| | ||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1163868 agagcaagcggggcatcctgaccctcaagtaccccatcgaacacggcatcgtcaccaact 1163927

                                                                           
Query: 333     gggacgacatggagaagatctggcaccacaccttctacaacgagctgcgtgtggcccccg 392
               ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||
Sbjct: 1163928 gggacgacatggagaagatctggcatcacaccttctacaacgagctgcgcgtggcccccg 1163987

                                                                           
Query: 393     aggagcaccccgtgctgctgaccgaggcccccctgaaccccaaagccaaccgtgagaaga 452
               ||||||||||||||||||| || |||||||||||||||||||| ||||||||||||||||
Sbjct: 1163988 aggagcaccccgtgctgctcacggaggcccccctgaaccccaaggccaaccgtgagaaga 1164047

                   
Query: 453     tgac 456
               ||||
Sbjct: 1164048 tgac 1164051



 Score =  268 bits (135), Expect = 1e-68
 Identities = 171/183 (93%)
 Strand = Plus / Plus

                                                                           
Query: 899     ggcatggaatcctgcggcatccacgaaactaccttcaactccatcatgaagtgcgacgtc 958
               |||||||| ||||||||||||||||| || ||||||||||| ||||||||||||||||| 
Sbjct: 1164879 ggcatggagtcctgcggcatccacgagaccaccttcaactcgatcatgaagtgcgacgtg 1164938

                                                                           
Query: 959     gacatccgcaaggacctctacgccaacacggtgctgtcgggtggcaccaccatgtaccca 1018
               |||||| | ||||||||||||||||||||||||||||| || || |||||||||||||| 
Sbjct: 1164939 gacatcaggaaggacctctacgccaacacggtgctgtctggcgggaccaccatgtacccc 1164998

                                                                           
Query: 1019    ggcatcgccgacaggatgcagaaggagatcacggccctggcgcccagcacgatgaagatc 1078
               |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1164999 ggcatcgccgacaggatgcagaaggagatcacggccctggcgcccagcaccatgaagatc 1165058

                  
Query: 1079    aag 1081
               |||
Sbjct: 1165059 aag 1165061



 Score =  258 bits (130), Expect = 9e-66
 Identities = 148/154 (96%)
 Strand = Plus / Plus

                                                                           
Query: 1080    agatcatcgcgcctccagagcgcaagtactccgtgtggatcggcggctccatcctggcct 1139
               |||||||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||
Sbjct: 1165151 agatcatcgcgcctcccgagcgcaagtactcggtgtggatcgggggctccatcctggcct 1165210

                                                                           
Query: 1140    cgctgtccaccttccagcagatgtggatcagcaagcaggagtacgacgagtccggcccct 1199
               |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct: 1165211 cgctgtccaccttccagcagatgtggatcagcaagcaggagtacgacgagtcgggcccgt 1165270

                                                 
Query: 1200    ccatcgtccaccgcaaatgcttctaggcggactg 1233
               |||||||||||||||||||||||||| |||||||
Sbjct: 1165271 ccatcgtccaccgcaaatgcttctagacggactg 1165304


>Sscrofa_Chr16 
||          Length = 86898991

 Score =  597 bits (301), Expect = e-168
 Identities = 727/865 (84%), Gaps = 3/865 (0%)
 Strand = Plus / Minus

                                                                            
Query: 134      ggctccggcatgtgcaaggccggctttgcgggcgacgatgctccccgggccgtcttcccc 193
                ||||| || ||||||||||| |||||||  || |||||||| |||||||| || ||||||
Sbjct: 38871137 ggctcagggatgtgcaaggcaggctttggtggtgacgatgccccccgggctgtgttcccc 38871078

                                                                            
Query: 194      tccatcgtggggcgcccccgacaccagggcgtgatggtgggcatgggccagaaggactcc 253
                ||| | || ||||| ||||| ||||||||||| ||||| ||||||||||||||||||| |
Sbjct: 38871077 tccgtggtagggcgtccccggcaccagggcgtcatggtaggcatgggccagaaggactgc 38871018

                                                                            
Query: 254      tacgtgggggacgaggcccagagcaagagaggcatcctgaccctcaagtaccccatcgag 313
                || |||||||| || |||||||||||||| |||||||||||||| ||||| ||||| |||
Sbjct: 38871017 tatgtgggggatgaagcccagagcaagaggggcatcctgaccctgaagtatcccattgag 38870958

                                                                            
Query: 314      cacggcatcgtcaccaactgggacgacatggagaagatctggcaccacaccttctacaac 373
                || ||  | |||||||||||||| |||||||||||||||||||||||||| |||||||| 
Sbjct: 38870957 catggagtggtcaccaactgggatgacatggagaagatctggcaccacactttctacaat 38870898

                                                                            
Query: 374      gagctgcgtgtggcccccgaggagcaccccgtgctgctgaccgaggcccccctgaacccc 433
                ||||| |||||||| || || ||||||||| | || || |||||||||||||| ||||||
Sbjct: 38870897 gagctccgtgtggcaccagatgagcaccccatcctcctcaccgaggcccccctcaacccc 38870838

                                                                            
Query: 434      aaagccaaccgtgagaagatgacccagatcatgttcgagaccttcaacaccccagccatg 493
                ||   |||||| ||||| ||||| ||||||||||||||| | |||||||| || ||||||
Sbjct: 38870837 aagatcaaccgagagaaaatgactcagatcatgttcgaggctttcaacacacctgccatg 38870778

                                                                            
Query: 494      tacgtggccatccaggccgtgctgtccctgtacgcctctggccgcaccactggcatcgtg 553
                || ||||| |||||||| ||| | ||||| || ||||| ||||| |||||||||||||||
Sbjct: 38870777 tatgtggctatccaggctgtgttatccctctatgcctcgggccggaccactggcatcgtg 38870718

                                                                            
Query: 554      atggactccggagacggggtcacccacacggtgcccatctacgaggggtacgccctgccc 613
                ||||| || || || |||||||| ||||| ||||||||||| || || ||||||||||||
Sbjct: 38870717 atggattctggggatggggtcactcacacagtgcccatctatgaaggctacgccctgccc 38870658

                                                                            
Query: 614      cacgccatcctgcgtctggacctggctggccgggacctgaccgactacctcatgaagatc 673
                || |||||||| |||||||||||||||||| | |||||||| ||||||||||||||||||
Sbjct: 38870657 catgccatcctccgtctggacctggctggcagagacctgactgactacctcatgaagatc 38870598

                                                                            
Query: 674      ctgacggagcggggctacagcttcaccaccacggccgagcgggagatcgtgcgggacatc 733
                |||||||| || ||||||| ||| |||||||| |||||||||||||| || || ||  ||
Sbjct: 38870597 ctgacggaacgaggctacaactttaccaccacagccgagcgggagattgtccgcgatgtc 38870538

                                                                            
Query: 734      aaggagaagctgtgctacgtcgccctggacttcgagcaggagatggccactgccgcgtcc 793
                || ||||||||||||||||| |||||||||||||| || ||||||| |  ||| ||  | 
Sbjct: 38870537 aaagagaagctgtgctacgtggccctggacttcgaacaagagatggtcggtgctgctgca 38870478

                                                                            
Query: 794      tcctcctccctggagaagagctacgagctgcccgacggccaggtcatcaccatcggcaac 853
                ||| |||| || || |  ||||| ||||| ||||| || ||||| |||||||| || || 
Sbjct: 38870477 tccccctcactcgaaagaagctatgagcttcccgatgggcaggtgatcaccattgggaat 38870418

                                                                            
Query: 854      gagcgcttccgctgccccgaggcgctcttccagccctccttcctgggcatggaatcctgc 913
                || ||||| || ||||| || ||  | |||||||| ||||| |||||||| || ||| ||
Sbjct: 38870417 gaacgctttcgatgccctgaagccattttccagccttcctttctgggcattgagtccagc 38870358

                                                                            
Query: 914      ggcatccacgaaactaccttcaactccatcatgaagtgcgacgtcgacatccgcaaggac 973
                || ||||| || ||  ||||| |||| |||| | |||| ||||| || || |||||||||
Sbjct: 38870357 gggatccatgagacacccttc-actctatcacg-agtgtgacgtggatattcgcaaggac 38870300

                                         
Query: 974      ctctacgccaacacggtgctgtcgg 998
                || || ||| |||| ||||||||||
Sbjct: 38870299 ctgtatgcc-acactgtgctgtcgg 38870276


>Sscrofa_Chr13 
||          Length = 218635234

 Score =  476 bits (240), Expect = e-131
 Identities = 771/942 (81%), Gaps = 12/942 (1%)
 Strand = Plus / Minus

                                                                             
Query: 284       ggcatcctgaccctcaagtaccccatcgagcacggcatcgtcaccaactgggacgacatg 343
                 ||||||||||||||||||||| |||  |||| | |||| |||||||||||||| ||||||
Sbjct: 154029096 ggcatcctgaccctcaagtactccactgagcccagcattgtcaccaactgggatgacatg 154029037

                                                                             
Query: 344       gagaagatctggcaccacaccttctacaacgagctgcgtgtggcccccgaggagcacccc 403
                 ||||||||||||||||||||||   |||| ||||||||||||||||| ||||||||||  
Sbjct: 154029036 gagaagatctggcaccacacct---acaatgagctgcgtgtggcccctgaggagcacctt 154028980

                                                                             
Query: 404       gtgctgctgaccgaggcccccctgaaccccaaagccaaccgtgagaagatgacccagatc 463
                 |||||   |||  |||||||| ||||| |||| | |||| |||||| ||| || ||| ||
Sbjct: 154028979 gtgctaacgacaaaggccccc-tgaactccaaggacaactgtgagacgataactcagttc 154028921

                                                                             
Query: 464       atgttcgagaccttcaacaccccagccatgtacgtggccatccaggccgt-gctgtccct 522
                 ||||| ||||  |||||||| |||||||| |  ||||||||||||||| | |||||||||
Sbjct: 154028920 atgttggagattttcaacactccagccatatgtgtggccatccaggccattgctgtccct 154028861

                                                                             
Query: 523       gtacgcctctggccgcaccactggcatcgtgatggactccggagacggggtcacccacac 582
                 |||| |||||||| ||||   | |||  || |||||||| || ||| |||| ||||||| 
Sbjct: 154028860 gtacacctctggctgcac---ttgcactgtcatggactctggggacagggttacccacat 154028804

                                                                             
Query: 583       ggtgcccatctacgaggggtacgccctgccccacgccatcctgcgtctggacctggctgg 642
                 |||||||||||| || ||||| | |||| | || || ||||||| |||||||||||||||
Sbjct: 154028803 ggtgcccatctatgaagggtatggcctgtctcaggctatcctgcatctggacctggctgg 154028744

                                                                             
Query: 643       ccgggacctgaccgactacctcatgaagatcctgacggagcggggctacagcttcaccac 702
                 ||| | ||||||| ||||| |||| |||||||| | ||| |||||||  || ||||||||
Sbjct: 154028743 ccgagtcctgacccactacttcataaagatcctcatggaccggggctgaaggttcaccac 154028684

                                                                             
Query: 703       cacggccgagcgggagatcgtgcgggacatcaaggagaagctgtgctacgtcgccctgga 762
                 ||| |  ||| |||||||| || | |||||||||||||| || ||||  ||| |||||||
Sbjct: 154028683 cacagaggagtgggagatcatgggtgacatcaaggagaaactctgctgtgtcaccctgga 154028624

                                                                             
Query: 763       cttcgagcaggagatggccactgccgcgtcctcctcctccctggagaagagctacgagct 822
                 |||| |||||||||| |||||  ||  ||||||||||||| ||||||| ||||||  |||
Sbjct: 154028623 cttcaagcaggagatagccaccaccatgtcctcctcctccatggagaaaagctacaggct 154028564

                                                                             
Query: 823       gcccgacggccaggtcatcaccatcggcaacgagcgcttccgctgccccgaggcgctctt 882
                  ||||| | |||||| ||||||||  ||||| || | ||| | || || ||   ||||||
Sbjct: 154028563 tcccgaagaccaggtgatcaccataagcaacaagtggttcaggtgtccagacatgctctt 154028504

                                                                             
Query: 883       ccagccctccttcctgggcatggaatcctgcggcatccacgaaactaccttcaactccat 942
                 |||| |||| |||||||| ||||| | ||| ||||||||| | || |||||||||| |||
Sbjct: 154028503 ccagtcctctttcctgggtatggagttctgtggcatccacaagaccaccttcaactgcat 154028444

                                                                             
Query: 943       catgaagtgcgacgtcgacatccgcaaggacctctacgccaacacggtgctgtcgggtgg 1002
                 ||||||||| |||  |||||||   |||| ||| || |||||||| |||||||| |||||
Sbjct: 154028443 catgaagtgtgacagcgacatcaagaagggcctgtatgccaacacagtgctgtctggtgg 154028384

                                                                             
Query: 1003      caccaccatgtacccaggcatcgccgacaggatgcagaaggagatcacggccctggcgcc 1062
                  |||||||||||||| |||||| || |||||| ||   |||||||||| || ||||  ||
Sbjct: 154028383 gaccaccatgtaccctggcatccccaacaggacgc---aggagatcacagctctggtccc 154028327

                                                                             
Query: 1063      cagcacgatgaagatcaagatcatcgcgcctccagagcgcaagtactccgtgtggatcgg 1122
                 || || |||||||||||||||||| || |||||  || ||| |||||| | |||||||||
Sbjct: 154028326 caccatgatgaagatcaagatcatggctcctccctagtgcatgtactctgcgtggatcgg 154028267

                                                                             
Query: 1123      cggctccatcctggcctcgctgtccaccttccagcagatgtggatcagcaagcaggagta 1182
                  || |||| ||||||||| || ||  ||||||||||||||| ||||||| ||||||||| 
Sbjct: 154028266 gggttccaccctggcctcactatctgccttccagcagatgt-gatcagccagcaggagtg 154028208

                                                           
Query: 1183      cgacgagtccggcccctccatcgtccaccgcaaatgcttcta 1224
                  ||| | || ||||  |||||| |||||| ||||| ||||||
Sbjct: 154028207 ggacaattcaggccagtccatcatccaccacaaatacttcta 154028166


>Sscrofa_Chr14 
||          Length = 153851969

 Score =  424 bits (214), Expect = e-116
 Identities = 298/326 (91%)
 Strand = Plus / Plus

                                                                            
Query: 218      cagggcgtgatggtgggcatgggccagaaggactcctacgtgggggacgaggcccagagc 277
                |||||||| |||||||| ||||| ||||| || ||||||||||| |||||||| ||||||
Sbjct: 65237534 cagggcgtcatggtgggtatgggtcagaaagattcctacgtgggcgacgaggctcagagc 65237593

                                                                            
Query: 278      aagagaggcatcctgaccctcaagtaccccatcgagcacggcatcgtcaccaactgggac 337
                |||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 65237594 aagagaggtatcctgaccctcaagtaccccatcgagcacggcatcatcaccaactgggac 65237653

                                                                            
Query: 338      gacatggagaagatctggcaccacaccttctacaacgagctgcgtgtggcccccgaggag 397
                ||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||
Sbjct: 65237654 gacatggagaagatctggcaccacaccttctacaacgagctccgggtggcccccgaggag 65237713

                                                                            
Query: 398      caccccgtgctgctgaccgaggcccccctgaaccccaaagccaaccgtgagaagatgacc 457
                ||||||   ||||| |||||||||||||| |||||||| |||||||| ||||||||||| 
Sbjct: 65237714 caccccaccctgctcaccgaggcccccctcaaccccaaggccaaccgcgagaagatgact 65237773

                                                                            
Query: 458      cagatcatgttcgagaccttcaacaccccagccatgtacgtggccatccaggccgtgctg 517
                ||||||||||| ||||||||||||   || ||||||||||||||||||||||| ||||||
Sbjct: 65237774 cagatcatgtttgagaccttcaacgtgcccgccatgtacgtggccatccaggcagtgctg 65237833

                                          
Query: 518      tccctgtacgcctctggccgcaccac 543
                ||||| |||||||| ||||| |||||
Sbjct: 65237834 tccctctacgcctccggccgtaccac 65237859



 Score =  274 bits (138), Expect = 2e-70
 Identities = 174/186 (93%)
 Strand = Plus / Plus

                                                                            
Query: 710      gagcgggagatcgtgcgggacatcaaggagaagctgtgctacgtcgccctggacttcgag 769
                ||||| ||||||||||| ||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 65238245 gagcgcgagatcgtgcgcgacatcaaggagaagctatgctacgtggccctggacttcgag 65238304

                                                                            
Query: 770      caggagatggccactgccgcgtcctcctcctccctggagaagagctacgagctgcccgac 829
                 | ||||||||||| ||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 65238305 aacgagatggccaccgccgcctcctcctcctccctggagaagagctacgagctgccagac 65238364

                                                                            
Query: 830      ggccaggtcatcaccatcggcaacgagcgcttccgctgccccgaggcgctcttccagccc 889
                ||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||
Sbjct: 65238365 ggccaggtcatcaccatcggcaacgagcgcttccgctgcccggaaacgctcttccagccc 65238424

                      
Query: 890      tccttc 895
                ||||||
Sbjct: 65238425 tccttc 65238430



 Score =  240 bits (121), Expect = 2e-60
 Identities = 172/189 (91%)
 Strand = Plus / Minus

                                                                             
Query: 707       gccgagcgggagatcgtgcgggacatcaaggagaagctgtgctacgtcgccctggacttc 766
                 |||||||| ||||| || |||||||||||||||||||||||||| || ||||||||||| 
Sbjct: 109858839 gccgagcgtgagattgtccgggacatcaaggagaagctgtgctatgtagccctggacttt 109858780

                                                                             
Query: 767       gagcaggagatggccactgccgcgtcctcctcctccctggagaagagctacgagctgccc 826
                 ||  | ||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 109858779 gaaaatgagatggccactgccgcgtcctcctcctccctggagaagagctacgagctgcct 109858720

                                                                             
Query: 827       gacggccaggtcatcaccatcggcaacgagcgcttccgctgccccgaggcgctcttccag 886
                 ||||| ||||| ||||||||||| |||||||||||||||||||| ||| | || ||||||
Sbjct: 109858719 gacgggcaggtgatcaccatcgggaacgagcgcttccgctgcccggagaccctgttccag 109858660

                          
Query: 887       ccctccttc 895
                 |||||||||
Sbjct: 109858659 ccctccttc 109858651



 Score =  232 bits (117), Expect = 5e-58
 Identities = 138/145 (95%)
 Strand = Plus / Plus

                                                                            
Query: 1080     agatcatcgcgcctccagagcgcaagtactccgtgtggatcggcggctccatcctggcct 1139
                |||||||||| || || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65238792 agatcatcgccccgccggagcgcaagtactccgtgtggatcggcggctccatcctggcct 65238851

                                                                            
Query: 1140     cgctgtccaccttccagcagatgtggatcagcaagcaggagtacgacgagtccggcccct 1199
                |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| |
Sbjct: 65238852 cgctgtccaccttccagcagatgtggatcaccaagcaggagtacgacgaggccggcccat 65238911

                                         
Query: 1200     ccatcgtccaccgcaaatgcttcta 1224
                | |||||||||||||||||||||||
Sbjct: 65238912 ctatcgtccaccgcaaatgcttcta 65238936



 Score =  172 bits (87), Expect = 4e-40
 Identities = 132/147 (89%)
 Strand = Plus / Minus

                                                                             
Query: 545       ggcatcgtgatggactccggagacggggtcacccacacggtgcccatctacgaggggtac 604
                 ||||| ||| ||||||| ||||| || ||||||||||  |||||||| |||||||| |||
Sbjct: 109860451 ggcattgtgctggactctggagatggtgtcacccacaacgtgcccatttacgagggctac 109860392

                                                                             
Query: 605       gccctgccccacgccatcctgcgtctggacctggctggccgggacctgaccgactacctc 664
                 |||||||||||||||||| |||||||||||||||| ||||| || || ||||||||||||
Sbjct: 109860391 gccctgccccacgccatcatgcgtctggacctggcgggccgagatctcaccgactacctc 109860332

                                            
Query: 665       atgaagatcctgacggagcggggctac 691
                 |||||||||||||||||||| ||||||
Sbjct: 109860331 atgaagatcctgacggagcgtggctac 109860305



 Score =  168 bits (85), Expect = 7e-39
 Identities = 130/145 (89%)
 Strand = Plus / Minus

                                                                             
Query: 1080      agatcatcgcgcctccagagcgcaagtactccgtgtggatcggcggctccatcctggcct 1139
                 ||||||| || ||||| |||||||| |||||||| ||||| || ||||||||||||||||
Sbjct: 109853150 agatcattgcccctcctgagcgcaaatactccgtctggattggtggctccatcctggcct 109853091

                                                                             
Query: 1140      cgctgtccaccttccagcagatgtggatcagcaagcaggagtacgacgagtccggcccct 1199
                 | ||||||||||||||||| |||||||||||||| ||||||||||||||  |||| || |
Sbjct: 109853090 ctctgtccaccttccagcaaatgtggatcagcaaacaggagtacgacgaagccgggccgt 109853031

                                          
Query: 1200      ccatcgtccaccgcaaatgcttcta 1224
                 |||| ||||||||||||||||||||
Sbjct: 109853030 ccattgtccaccgcaaatgcttcta 109853006



 Score =  143 bits (72), Expect = 4e-31
 Identities = 144/168 (85%)
 Strand = Plus / Plus

                                                                            
Query: 914      ggcatccacgaaactaccttcaactccatcatgaagtgcgacgtcgacatccgcaaggac 973
                |||||||| || ||||||| ||||  |||||||||||||||| |||| ||| | ||||||
Sbjct: 65238543 ggcatccatgagactacctacaacagcatcatgaagtgcgacatcgatatcaggaaggac 65238602

                                                                            
Query: 974      ctctacgccaacacggtgctgtcgggtggcaccaccatgtacccaggcatcgccgacagg 1033
                || ||||||||||  ||  |||| || ||||||||||||||||| |||||||| ||| | 
Sbjct: 65238603 ctgtacgccaacaatgtcatgtcagggggcaccaccatgtacccgggcatcgctgaccgc 65238662

                                                                
Query: 1034     atgcagaaggagatcacggccctggcgcccagcacgatgaagatcaag 1081
                ||||||||||||||||| || ||||| |||||||| ||||||||||||
Sbjct: 65238663 atgcagaaggagatcaccgctctggcccccagcaccatgaagatcaag 65238710



 Score =  135 bits (68), Expect = 9e-29
 Identities = 143/168 (85%)
 Strand = Plus / Minus

                                                                             
Query: 914       ggcatccacgaaactaccttcaactccatcatgaagtgcgacgtcgacatccgcaaggac 973
                 |||||||| || || |||| ||||  |||||||||||||||| | |||||| | ||||||
Sbjct: 109857385 ggcatccatgagaccacctacaacagcatcatgaagtgcgacattgacatcaggaaggac 109857326

                                                                             
Query: 974       ctctacgccaacacggtgctgtcgggtggcaccaccatgtacccaggcatcgccgacagg 1033
                 ||||| || ||||  || || || || ||||||||||||||||| ||||| |||||| | 
Sbjct: 109857325 ctctatgctaacaacgtcctctctgggggcaccaccatgtaccccggcattgccgaccgc 109857266

                                                                 
Query: 1034      atgcagaaggagatcacggccctggcgcccagcacgatgaagatcaag 1081
                 ||||||||||||||||| |||||||| |||||||| ||||||||||||
Sbjct: 109857265 atgcagaaggagatcacagccctggcacccagcaccatgaagatcaag 109857218



 Score =  125 bits (63), Expect = 9e-26
 Identities = 126/147 (85%)
 Strand = Plus / Plus

                                                                            
Query: 545      ggcatcgtgatggactccggagacggggtcacccacacggtgcccatctacgaggggtac 604
                ||||||||| | ||||| || ||||| ||||||||||  ||||||||||| ||||| |||
Sbjct: 65237983 ggcatcgtgctcgactctggcgacggcgtcacccacaacgtgcccatctatgagggctac 65238042

                                                                            
Query: 605      gccctgccccacgccatcctgcgtctggacctggctggccgggacctgaccgactacctc 664
                || ||||| ||||||||| |||| ||||||||||| ||||| || || ||||||||||| 
Sbjct: 65238043 gcgctgccacacgccatcatgcgcctggacctggccggccgcgatctcaccgactacctg 65238102

                                           
Query: 665      atgaagatcctgacggagcggggctac 691
                ||||||||||| || ||||| ||||||
Sbjct: 65238103 atgaagatcctcaccgagcgtggctac 65238129



 Score =  101 bits (51), Expect = 1e-18
 Identities = 108/127 (85%)
 Strand = Plus / Minus

                                                                             
Query: 219       agggcgtgatggtgggcatgggccagaaggactcctacgtgggggacgaggcccagagca 278
                 |||| ||||||||||| ||||| || || |||  ||||||||| ||||| ||||| ||||
Sbjct: 109866050 agggggtgatggtgggaatgggacaaaaagacagctacgtgggtgacgaagcccaaagca 109865991

                                                                             
Query: 279       agagaggcatcctgaccctcaagtaccccatcgagcacggcatcgtcaccaactgggacg 338
                 | ||||| ||||||||| | |||||||| || || ||||||||| ||||||||||||| |
Sbjct: 109865990 aaagaggaatcctgaccttgaagtacccaatagaacacggcatcatcaccaactgggatg 109865931

                        
Query: 339       acatgga 345
                 |||||||
Sbjct: 109865930 acatgga 109865924



 Score = 97.6 bits (49), Expect = 2e-17
 Identities = 97/113 (85%)
 Strand = Plus / Minus

                                                                             
Query: 348       agatctggcaccacaccttctacaacgagctgcgtgtggcccccgaggagcaccccgtgc 407
                 |||||||||||||| | |||||||| ||||| ||||| ||||| || ||||| ||    |
Sbjct: 109863454 agatctggcaccactctttctacaatgagcttcgtgttgccccagaagagcatccgaccc 109863395

                                                                      
Query: 408       tgctgaccgaggcccccctgaaccccaaagccaaccgtgagaagatgacccag 460
                 |||| |||||||| |||||||||||||| |||||||| |||||||||||||||
Sbjct: 109863394 tgctcaccgaggcacccctgaaccccaaggccaaccgggagaagatgacccag 109863342



 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 46/51 (90%)
 Strand = Plus / Minus

                                                                    
Query: 484       cccagccatgtacgtggccatccaggccgtgctgtccctgtacgcctctgg 534
                 |||||||||||| ||||| || ||||| ||||||||||| |||||||||||
Sbjct: 109861119 cccagccatgtatgtggctattcaggcggtgctgtccctctacgcctctgg 109861069


>Sscrofa_Chr01 
||          Length = 315321322

 Score =  359 bits (181), Expect = 3e-96
 Identities = 283/317 (89%)
 Strand = Plus / Plus

                                                                             
Query: 227       atggtgggcatgggccagaaggactcctacgtgggggacgaggcccagagcaagagaggc 286
                 |||||||| ||||| |||||||| ||||||||||| |||||||||||||||||| |||| 
Sbjct: 152414269 atggtgggtatgggtcagaaggattcctacgtgggtgacgaggcccagagcaagcgaggt 152414328

                                                                             
Query: 287       atcctgaccctcaagtaccccatcgagcacggcatcgtcaccaactgggacgacatggag 346
                 || |||||||||||||| ||||| ||||| |||||| ||||||||||||| |||||||||
Sbjct: 152414329 attctgaccctcaagtatcccattgagcatggcatcatcaccaactgggatgacatggag 152414388

                                                                             
Query: 347       aagatctggcaccacaccttctacaacgagctgcgtgtggcccccgaggagcaccccgtg 406
                 |||||||||||||||||||||||||||||||| ||||| |||||||||||||||||    
Sbjct: 152414389 aagatctggcaccacaccttctacaacgagctccgtgtagcccccgaggagcaccctact 152414448

                                                                             
Query: 407       ctgctgaccgaggcccccctgaaccccaaagccaaccgtgagaagatgacccagatcatg 466
                 ||||| || |||||||||||||||||||| |||||||| |||||||||||||||||||||
Sbjct: 152414449 ctgctcactgaggcccccctgaaccccaaggccaaccgcgagaagatgacccagatcatg 152414508

                                                                             
Query: 467       ttcgagaccttcaacaccccagccatgtacgtggccatccaggccgtgctgtccctgtac 526
                 || || ||||||||   ||| |||||||| |||||||||||||| ||||||||||| || 
Sbjct: 152414509 tttgaaaccttcaatgtccctgccatgtatgtggccatccaggcggtgctgtccctctat 152414568

                                  
Query: 527       gcctctggccgcaccac 543
                 || |||||||| |||||
Sbjct: 152414569 gcttctggccgtaccac 152414585



 Score =  151 bits (76), Expect = 2e-33
 Identities = 145/168 (86%)
 Strand = Plus / Plus

                                                                             
Query: 728       gacatcaaggagaagctgtgctacgtcgccctggacttcgagcaggagatggccactgcc 787
                 ||||| || |||||||||||||| || |||||||| || ||| | |||||||| || || 
Sbjct: 152415603 gacattaaagagaagctgtgctatgttgccctggattttgagaatgagatggctacagct 152415662

                                                                             
Query: 788       gcgtcctcctcctccctggagaagagctacgagctgcccgacggccaggtcatcaccatc 847
                 || || ||||||||| ||||||||||||| || ||||| || |||||||||||||| || 
Sbjct: 152415663 gcttcttcctcctccttggagaagagctatgaactgcctgatggccaggtcatcactatt 152415722

                                                                 
Query: 848       ggcaacgagcgcttccgctgccccgaggcgctcttccagccctccttc 895
                 ||||| ||||||||||||||||| ||| ||||||||||||||||||||
Sbjct: 152415723 ggcaatgagcgcttccgctgccctgagacgctcttccagccctccttc 152415770



 Score =  127 bits (64), Expect = 2e-26
 Identities = 112/128 (87%)
 Strand = Plus / Plus

                                                                             
Query: 1097      gagcgcaagtactccgtgtggatcggcggctccatcctggcctcgctgtccaccttccag 1156
                 ||||| |||||||| || ||||| || |||||||||||||| ||  ||||||||||||| 
Sbjct: 152417305 gagcgtaagtactctgtctggattgggggctccatcctggcatccttgtccaccttccaa 152417364

                                                                             
Query: 1157      cagatgtggatcagcaagcaggagtacgacgagtccggcccctccatcgtccaccgcaaa 1216
                 ||||||||||| |||||||| ||||| || ||| | ||||| ||||||||||||||||||
Sbjct: 152417365 cagatgtggattagcaagcaagagtatgatgaggcaggcccatccatcgtccaccgcaaa 152417424

                         
Query: 1217      tgcttcta 1224
                 ||||||||
Sbjct: 152417425 tgcttcta 152417432



 Score = 99.6 bits (50), Expect = 5e-18
 Identities = 140/171 (81%), Gaps = 8/171 (4%)
 Strand = Plus / Minus

                                                                             
Query: 627       gtctggacctggctggccgggacctgaccgactacctcatgaagatcctgacggagcggg 686
                 |||||||||||||||||| ||||||||| |||||||||| |||||| || | ||||    
Sbjct: 248571681 gtctggacctggctggccaggacctgactgactacctcaagaagattctcaaggag---- 248571626

                                                                             
Query: 687       gctacagcttcaccaccacggccgagcgggagatcgtgcgggacatcaaggagaagctgt 746
                     |||||||||  |||| |||||| ||||||| || || ||| ||||| ||||||| |
Sbjct: 248571625 ----cagcttcactgccacagccgagggggagattgttcgtgacttcaagaagaagctct 248571570

                                                                    
Query: 747       gctacgtcgccctggacttcgagcaggagatggccactgccgcgtcctcct 797
                 ||||||| || |||||||| ||||||||| |||||||| | ||||| ||||
Sbjct: 248571569 gctacgttgctctggacttggagcaggaggtggccactactgcgtcttcct 248571519



 Score = 89.7 bits (45), Expect = 5e-15
 Identities = 90/105 (85%)
 Strand = Plus / Plus

                                                                             
Query: 587       cccatctacgaggggtacgccctgccccacgccatcctgcgtctggacctggctggccgg 646
                 ||||| |||||||| || ||| |||| || |||||| |||||||||| |||||||| |||
Sbjct: 152415278 cccatttacgagggctatgccttgccacatgccatcatgcgtctggatctggctggtcgg 152415337

                                                              
Query: 647       gacctgaccgactacctcatgaagatcctgacggagcggggctac 691
                 || || || |||||||||||||||||||| || ||||| ||||||
Sbjct: 152415338 gatctcactgactacctcatgaagatcctcactgagcgtggctac 152415382



 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 67/78 (85%)
 Strand = Plus / Plus

                                                                             
Query: 1004      accaccatgtacccaggcatcgccgacaggatgcagaaggagatcacggccctggcgccc 1063
                 ||||||||||||||||| || || ||  | ||||| ||||| ||||| |||||||| |||
Sbjct: 152416658 accaccatgtacccaggtattgctgatcgcatgcaaaaggaaatcactgccctggctccc 152416717

                                   
Query: 1064      agcacgatgaagatcaag 1081
                 ||||| ||||||||||||
Sbjct: 152416718 agcaccatgaagatcaag 152416735



 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 58/67 (86%)
 Strand = Plus / Minus

                                                                             
Query: 1108      ctccgtgtggatcggcggctccatcctggcctcgctgtccaccttccagcagatgtggat 1167
                 ||||||||||| ||||||||||||||||||||| |||    ||||||||||| | ||| |
Sbjct: 280407481 ctccgtgtggaccggcggctccatcctggcctccctgcaggccttccagcagctctgggt 280407422

                        
Query: 1168      cagcaag 1174
                 |||||||
Sbjct: 280407421 cagcaag 280407415


>gb|GL894474.1| Sus scrofa unplaced genomic scaffold chrU_scaffold3135
          Length = 30778

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 112/136 (82%), Gaps = 2/136 (1%)
 Strand = Plus / Plus

                                                                         
Query: 690   acagcttcaccaccacggccgagcgggagatcgtgcgggacatcaaggagaagctgtgct 749
             |||||||||||||| |||| |||| ||| ||| |||  |||| ||||||| ||   ||||
Sbjct: 24293 acagcttcaccaccgcggctgagcagga-atcatgcctgacaccaaggagcagtgctgct 24351

                                                                         
Query: 750   acgtcgccctggacttcgagcaggagatggccactgccgcgtcctcctcctccctggaga 809
              ||| ||||||| ||| | ||||||||||||||| |||| |||||||  |||||| | | 
Sbjct: 24352 ccgtggccctggccttggcgcaggagatggccaccgccgtgtcctcccgctccct-gtgc 24410

                             
Query: 810   agagctacgagctgcc 825
             ||||||||||||||||
Sbjct: 24411 agagctacgagctgcc 24426


>Sscrofa_Chr18 
||          Length = 61220071

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 43/47 (91%)
 Strand = Plus / Minus

                                                               
Query: 1252     tttcttgacaaaacctaacttgcgcagaaaatgagatgagattggca 1298
                |||||||||||||||||||||| |||||||| ||||||  |||||||
Sbjct: 56666610 tttcttgacaaaacctaacttgtgcagaaaacgagatggcattggca 56666564


  Database: Sscrofa_10.2.fasta
    Posted date:  Nov 16, 2011 10:34 AM
  Number of letters in database: 2,808,509,378
  Number of sequences in database:  4582
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 35,595,023
Number of extensions: 229
Number of successful extensions: 229
Number of sequences better than 1.0e-05: 8
Number of HSP's gapped: 223
Number of HSP's successfully gapped: 42
Length of query: 1794
Length of database: 2,808,509,378
Length adjustment: 22
Effective length of query: 1772
Effective length of database: 2,808,408,574
Effective search space: 4976499993128
Effective search space used: 4976499993128
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)