Animal-Genome cDNA 20110601C-000642


Search to RefSeqBP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-000642
         (1919 letters)

Database: RefSeq49_BP.fasta 
           33,088 sequences; 17,681,374 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001033607.1| MHC class I heavy chain isoform 1 [Bos tauru...   518   e-147
Alignment   gi|NP_001035588.1| MHC Class I JSP.1 [Bos taurus].                   501   e-142
Alignment   gi|NP_001137215.1| hypothetical protein LOC790811 [Bos taurus].      499   e-141
Alignment   gi|NP_001098957.1| hypothetical protein LOC100125916 [Bos tauru...   498   e-141
Alignment   gi|XP_002697395.1| PREDICTED: MHC class I heavy chain [Bos taur...   495   e-140
Alignment   gi|XP_584616.5| PREDICTED: MHC class I heavy chain [Bos taurus].     495   e-140
Alignment   gi|NP_001108327.1| major histocompatibility complex, class I, A...   493   e-139
Alignment   gi|NP_001035644.1| major histocompatibility complex, class I, A...   493   e-139
Alignment   gi|NP_001035622.1| MHC class I heavy chain isoform 2 [Bos tauru...   491   e-139
Alignment   gi|XP_002697382.1| PREDICTED: MHC class I antigen clone 2 [Bos ...   491   e-139

>ref|NP_001033607.1| MHC class I heavy chain isoform 1 [Bos taurus].
          Length = 361

 Score =  518 bits (1333), Expect = e-147
 Identities = 255/359 (71%), Positives = 275/359 (76%)
 Frame = +1

Query: 58   LRIMGPRXXXXXXXXXXXXXXXREGPHSLRYFDTAVSRPDRGKPRFISVGYVDDTQFVRF 237
            +R+M PR                 G HSLRYF T VSRP  G+PRFI+VGYVDDTQFVRF
Sbjct: 1    MRVMRPRTLLLLLSGVLVLTETLAGSHSLRYFYTGVSRPGLGEPRFIAVGYVDDTQFVRF 60

Query: 238  DSDAPNPRMEPRAPWIEQEGQEYWDEETRNAMGSAQTFRVNLNNLRGYYNQSEAGSHTLQ 417
            DSDA +PR EPR PW+EQEG EYWD ETRN   +AQTFRVNLN L GYYNQSEAGSHTLQ
Sbjct: 61   DSDAADPRTEPRVPWMEQEGPEYWDRETRNLKDAAQTFRVNLNTLLGYYNQSEAGSHTLQ 120

Query: 418  SMYGCDVGPDWLFLRGYSQDAYDGADYIALNEDLRSWTAADTAAQITKRKWEAADEAEQM 597
             MYGCDV PD  FLRGY QDAYDG DYIALN+DLRSWTAADTAAQITKRKWEAA EAE+ 
Sbjct: 121  WMYGCDVEPDGRFLRGYRQDAYDGRDYIALNQDLRSWTAADTAAQITKRKWEAAGEAERR 180

Query: 598  RSYLEGACVEWLQKYLQMGNNTLQRAEPPKTHVTRHPSSDLGVTLRCWALGFYPKEISLT 777
            R+YLEG CVEWL++YL+ G +TL RA+PPK HVTRHPSSD  VTLRCWALGFYP+EISLT
Sbjct: 181  RNYLEGRCVEWLRRYLENGKDTLLRADPPKAHVTRHPSSDREVTLRCWALGFYPEEISLT 240

Query: 778  WQREGQDQSQDMELVETRPSGDGTFQKWAALVVPPGEEQSYTCHVQHEGLQEPLTLRWDP 957
            WQ  G+DQ+QDMELVETRPSGDGTFQKWAALVVP GEEQ YTC VQHEGL+EPLTLRW+P
Sbjct: 241  WQHNGEDQTQDMELVETRPSGDGTFQKWAALVVPSGEEQRYTCRVQHEGLREPLTLRWEP 300

Query: 958  PQXXXXXXXXXXXXXXXXXXXXXXXXXXXWRKKRSGEKGGSYTQAAGSDSAQGSDVSLT 1134
            PQ                           WRKK SGEKG  YTQAA SDSAQGSDVSLT
Sbjct: 301  PQ--TSFLTMGIIVGLVVLVVAVVAGAVIWRKKHSGEKGRIYTQAASSDSAQGSDVSLT 357


>ref|NP_001035588.1| MHC Class I JSP.1 [Bos taurus].
          Length = 359

 Score =  501 bits (1290), Expect = e-142
 Identities = 248/356 (69%), Positives = 269/356 (75%)
 Frame = +1

Query: 67   MGPRXXXXXXXXXXXXXXXREGPHSLRYFDTAVSRPDRGKPRFISVGYVDDTQFVRFDSD 246
            MGPR               R G HSLRYF TAVSRP  G+PRFI VGYVDDTQFVRFDSD
Sbjct: 1    MGPRTLLLLLSGVLVLTETRAGSHSLRYFYTAVSRPGLGEPRFIIVGYVDDTQFVRFDSD 60

Query: 247  APNPRMEPRAPWIEQEGQEYWDEETRNAMGSAQTFRVNLNNLRGYYNQSEAGSHTLQSMY 426
            A +PR+EPRA W+EQEG EYWD+ETR A   AQ FR+ LN LRGYYNQSEAGSHTLQ MY
Sbjct: 61   AGDPRVEPRARWVEQEGPEYWDQETRKAKDHAQFFRLGLNTLRGYYNQSEAGSHTLQWMY 120

Query: 427  GCDVGPDWLFLRGYSQDAYDGADYIALNEDLRSWTAADTAAQITKRKWEAADEAEQMRSY 606
            GCDVGPD   LRG+ Q  Y+G DYIALNEDLRSWTAADTAAQI+KRKWEAAD AE+ R+Y
Sbjct: 121  GCDVGPDGRLLRGFWQFGYEGRDYIALNEDLRSWTAADTAAQISKRKWEAADVAERQRNY 180

Query: 607  LEGACVEWLQKYLQMGNNTLQRAEPPKTHVTRHPSSDLGVTLRCWALGFYPKEISLTWQR 786
            LEG CVEWL +YL+ G +TL RA+PPK HVT HP S   VTLRCWALGFYP+EISLTWQR
Sbjct: 181  LEGTCVEWLPRYLENGKDTLLRADPPKAHVTHHPISGREVTLRCWALGFYPEEISLTWQR 240

Query: 787  EGQDQSQDMELVETRPSGDGTFQKWAALVVPPGEEQSYTCHVQHEGLQEPLTLRWDPPQX 966
             G+DQ+QDMELVETRPSGDGTFQKW ALVVP GEEQ YTC VQHEGLQEPLTLRW+PPQ 
Sbjct: 241  NGEDQTQDMELVETRPSGDGTFQKWVALVVPSGEEQRYTCSVQHEGLQEPLTLRWEPPQ- 299

Query: 967  XXXXXXXXXXXXXXXXXXXXXXXXXXWRKKRSGEKGGSYTQAAGSDSAQGSDVSLT 1134
                                      W KKRSGEKGG+Y QA+ SDSAQGSDVSLT
Sbjct: 300  TSFLTMGIIVGLVLLVTGAVVAGFVIWMKKRSGEKGGNYIQASRSDSAQGSDVSLT 355


>ref|NP_001137215.1| hypothetical protein LOC790811 [Bos taurus].
          Length = 361

 Score =  499 bits (1284), Expect = e-141
 Identities = 244/359 (67%), Positives = 269/359 (74%)
 Frame = +1

Query: 58   LRIMGPRXXXXXXXXXXXXXXXREGPHSLRYFDTAVSRPDRGKPRFISVGYVDDTQFVRF 237
            +R+MGPR               R G HS+RYF TAVSRP  G+P+++ VGYVDDTQFVRF
Sbjct: 1    MRVMGPRGLLLLLSGVLVLTGTRAGSHSMRYFSTAVSRPGLGEPQYLEVGYVDDTQFVRF 60

Query: 238  DSDAPNPRMEPRAPWIEQEGQEYWDEETRNAMGSAQTFRVNLNNLRGYYNQSEAGSHTLQ 417
            DSDAPNPRMEPRA W++QEG EYWDEET+ A G  Q FRVNLN LRGYYNQSEAGSHTLQ
Sbjct: 61   DSDAPNPRMEPRARWVKQEGPEYWDEETQRAKGITQVFRVNLNTLRGYYNQSEAGSHTLQ 120

Query: 418  SMYGCDVGPDWLFLRGYSQDAYDGADYIALNEDLRSWTAADTAAQITKRKWEAADEAEQM 597
             M GCDVGPD    RG+ Q  YDG DY+ALNEDLRSWTAADT AQI+KRK EAA  AE  
Sbjct: 121  WMCGCDVGPDGRLRRGFWQFGYDGRDYLALNEDLRSWTAADTGAQISKRKMEAAGAAESG 180

Query: 598  RSYLEGACVEWLQKYLQMGNNTLQRAEPPKTHVTRHPSSDLGVTLRCWALGFYPKEISLT 777
            R Y+EG CVEWL++YL+ G +TL RA+PPK HVT HP SD  VTLRCWALGFYPKEISLT
Sbjct: 181  RKYVEGTCVEWLRRYLENGKDTLLRADPPKAHVTHHPISDHEVTLRCWALGFYPKEISLT 240

Query: 778  WQREGQDQSQDMELVETRPSGDGTFQKWAALVVPPGEEQSYTCHVQHEGLQEPLTLRWDP 957
            WQR G+DQ+QDMELVETRPSGDG FQKWAALVVP GEEQ YTC VQHEGLQEPLTLRW+P
Sbjct: 241  WQRNGEDQTQDMELVETRPSGDGNFQKWAALVVPSGEEQRYTCRVQHEGLQEPLTLRWEP 300

Query: 958  PQXXXXXXXXXXXXXXXXXXXXXXXXXXXWRKKRSGEKGGSYTQAAGSDSAQGSDVSLT 1134
            PQ                           WRKK SGEKG +YTQA+ +DSAQGSDVSLT
Sbjct: 301  PQ--TPFLTVGIIVGLVLLVVAVVAGAVIWRKKCSGEKGRTYTQASSNDSAQGSDVSLT 357


>ref|NP_001098957.1| hypothetical protein LOC100125916 [Bos taurus].
          Length = 363

 Score =  498 bits (1282), Expect = e-141
 Identities = 244/359 (67%), Positives = 271/359 (75%)
 Frame = +1

Query: 58   LRIMGPRXXXXXXXXXXXXXXXREGPHSLRYFDTAVSRPDRGKPRFISVGYVDDTQFVRF 237
            +R+MGPR               R G HSLRYF TAVSRP  G+PRFISVGYVDDTQFVRF
Sbjct: 1    MRVMGPRTLLLLLSGVLVLTETRAGSHSLRYFYTAVSRPGLGEPRFISVGYVDDTQFVRF 60

Query: 238  DSDAPNPRMEPRAPWIEQEGQEYWDEETRNAMGSAQTFRVNLNNLRGYYNQSEAGSHTLQ 417
            DSDAPNPRMEPRA W+EQEG EYWD ETRN+  +AQ FRV+LN LRGYYNQSEAGSHTLQ
Sbjct: 61   DSDAPNPRMEPRARWVEQEGPEYWDRETRNSKDTAQGFRVDLNTLRGYYNQSEAGSHTLQ 120

Query: 418  SMYGCDVGPDWLFLRGYSQDAYDGADYIALNEDLRSWTAADTAAQITKRKWEAADEAEQM 597
             MYGC VGPD    RG++Q  YDG DY+ALNEDLRSWTA +T AQI+KRK EAA  AE+ 
Sbjct: 121  LMYGCYVGPDGSLRRGFTQYGYDGRDYLALNEDLRSWTAVETMAQISKRKVEAAGVAEKQ 180

Query: 598  RSYLEGACVEWLQKYLQMGNNTLQRAEPPKTHVTRHPSSDLGVTLRCWALGFYPKEISLT 777
            R+YLEG CVEWL++YL+ G +TL RA+PPK HVTRHP S   VTLRCWALGFYP+EISLT
Sbjct: 181  RNYLEGRCVEWLRRYLENGKDTLLRADPPKAHVTRHPISGREVTLRCWALGFYPEEISLT 240

Query: 778  WQREGQDQSQDMELVETRPSGDGTFQKWAALVVPPGEEQSYTCHVQHEGLQEPLTLRWDP 957
            WQR G+DQ+QDMELVETRPSGDG FQKWAAL+VP GEEQ YTC VQHEGLQEPLTL+W+P
Sbjct: 241  WQRNGEDQTQDMELVETRPSGDGNFQKWAALLVPSGEEQKYTCQVQHEGLQEPLTLKWEP 300

Query: 958  PQXXXXXXXXXXXXXXXXXXXXXXXXXXXWRKKRSGEKGGSYTQAAGSDSAQGSDVSLT 1134
            PQ                             KKRSGEK G+Y QA+ SDSAQGSDVSLT
Sbjct: 301  PQPSFLTMGIIVGLVLLVVTGAVVAGVVICMKKRSGEKRGTYIQASSSDSAQGSDVSLT 359


>ref|XP_002697395.1| PREDICTED: MHC class I heavy chain [Bos taurus].
          Length = 437

 Score =  495 bits (1275), Expect = e-140
 Identities = 241/370 (65%), Positives = 272/370 (73%)
 Frame = +1

Query: 22   IRLDSASLQTPRLRIMGPRXXXXXXXXXXXXXXXREGPHSLRYFDTAVSRPDRGKPRFIS 201
            +R DS S QT R+R+MGPR                 G HSL YF T VSRP  G+PRF +
Sbjct: 63   LRRDSVSPQTRRIRVMGPRTLLLLLSEVLVLTETWAGSHSLSYFCTCVSRPGLGEPRFFA 122

Query: 202  VGYVDDTQFVRFDSDAPNPRMEPRAPWIEQEGQEYWDEETRNAMGSAQTFRVNLNNLRGY 381
            VGYVDDTQF RFDSDAPNPRMEPRAPW+EQEG EYW+  TR+A  + Q  R  LN LRG+
Sbjct: 123  VGYVDDTQFARFDSDAPNPRMEPRAPWMEQEGPEYWEAMTRDAKKAQQRLRTGLNTLRGF 182

Query: 382  YNQSEAGSHTLQSMYGCDVGPDWLFLRGYSQDAYDGADYIALNEDLRSWTAADTAAQITK 561
            YNQSEAGSHTLQ ++GCDVGP+   LRG  Q+AYDGADY+ALNEDLRSWTAA+T AQITK
Sbjct: 183  YNQSEAGSHTLQWVFGCDVGPEGRLLRGIWQNAYDGADYLALNEDLRSWTAANTVAQITK 242

Query: 562  RKWEAADEAEQMRSYLEGACVEWLQKYLQMGNNTLQRAEPPKTHVTRHPSSDLGVTLRCW 741
            RKWE + EAE  R+YLE  CV+WL ++L+ G +TL RA+PPKTHV  HP SD  VTLRCW
Sbjct: 243  RKWETSGEAEFQRNYLEVKCVQWLLRHLETGKDTLLRADPPKTHVAHHPISDREVTLRCW 302

Query: 742  ALGFYPKEISLTWQREGQDQSQDMELVETRPSGDGTFQKWAALVVPPGEEQSYTCHVQHE 921
            ALGFYP+EISLTWQ++G+DQ+QDMELVETRPSGDGTFQKWAALVVP GEEQ YTCHVQHE
Sbjct: 303  ALGFYPEEISLTWQQDGEDQTQDMELVETRPSGDGTFQKWAALVVPSGEEQRYTCHVQHE 362

Query: 922  GLQEPLTLRWDPPQXXXXXXXXXXXXXXXXXXXXXXXXXXXWRKKRSGEKGGSYTQAAGS 1101
            GLQEPL+LRW PPQ                           WR K SG+ G  YTQAA S
Sbjct: 363  GLQEPLSLRWKPPQPSIPIMGIIVGLVLLMVTGAVVTGAVIWRNKHSGQTGRGYTQAASS 422

Query: 1102 DSAQGSDVSL 1131
            DSAQGSDVSL
Sbjct: 423  DSAQGSDVSL 432


>ref|XP_584616.5| PREDICTED: MHC class I heavy chain [Bos taurus].
          Length = 437

 Score =  495 bits (1275), Expect = e-140
 Identities = 241/370 (65%), Positives = 272/370 (73%)
 Frame = +1

Query: 22   IRLDSASLQTPRLRIMGPRXXXXXXXXXXXXXXXREGPHSLRYFDTAVSRPDRGKPRFIS 201
            +R DS S QT R+R+MGPR                 G HSL YF T VSRP  G+PRF +
Sbjct: 63   LRRDSVSPQTRRIRVMGPRTLLLLLSEVLVLTETWAGSHSLSYFCTCVSRPGLGEPRFFA 122

Query: 202  VGYVDDTQFVRFDSDAPNPRMEPRAPWIEQEGQEYWDEETRNAMGSAQTFRVNLNNLRGY 381
            VGYVDDTQF RFDSDAPNPRMEPRAPW+EQEG EYW+  TR+A  + Q  R  LN LRG+
Sbjct: 123  VGYVDDTQFARFDSDAPNPRMEPRAPWMEQEGPEYWEAMTRDAKKAQQRLRTGLNTLRGF 182

Query: 382  YNQSEAGSHTLQSMYGCDVGPDWLFLRGYSQDAYDGADYIALNEDLRSWTAADTAAQITK 561
            YNQSEAGSHTLQ ++GCDVGP+   LRG  Q+AYDGADY+ALNEDLRSWTAA+T AQITK
Sbjct: 183  YNQSEAGSHTLQWVFGCDVGPEGRLLRGIWQNAYDGADYLALNEDLRSWTAANTVAQITK 242

Query: 562  RKWEAADEAEQMRSYLEGACVEWLQKYLQMGNNTLQRAEPPKTHVTRHPSSDLGVTLRCW 741
            RKWE + EAE  R+YLE  CV+WL ++L+ G +TL RA+PPKTHV  HP SD  VTLRCW
Sbjct: 243  RKWETSGEAEFQRNYLEVKCVQWLLRHLETGKDTLLRADPPKTHVAHHPISDREVTLRCW 302

Query: 742  ALGFYPKEISLTWQREGQDQSQDMELVETRPSGDGTFQKWAALVVPPGEEQSYTCHVQHE 921
            ALGFYP+EISLTWQ++G+DQ+QDMELVETRPSGDGTFQKWAALVVP GEEQ YTCHVQHE
Sbjct: 303  ALGFYPEEISLTWQQDGEDQTQDMELVETRPSGDGTFQKWAALVVPSGEEQRYTCHVQHE 362

Query: 922  GLQEPLTLRWDPPQXXXXXXXXXXXXXXXXXXXXXXXXXXXWRKKRSGEKGGSYTQAAGS 1101
            GLQEPL+LRW PPQ                           WR K SG+ G  YTQAA S
Sbjct: 363  GLQEPLSLRWKPPQPSIPIMGIIVGLVLLMVTGAVVTGAVIWRNKHSGQTGRGYTQAASS 422

Query: 1102 DSAQGSDVSL 1131
            DSAQGSDVSL
Sbjct: 423  DSAQGSDVSL 432


>ref|NP_001108327.1| major histocompatibility complex, class I, A [Bos taurus].
          Length = 363

 Score =  493 bits (1270), Expect = e-139
 Identities = 241/337 (71%), Positives = 264/337 (78%)
 Frame = +1

Query: 124  REGPHSLRYFDTAVSRPDRGKPRFISVGYVDDTQFVRFDSDAPNPRMEPRAPWIEQEGQE 303
            R G HSLRYF TAVSRP  G+PRFISVGYVDDTQFVRFDSDAP+PR+EP A W+EQEG E
Sbjct: 24   RAGSHSLRYFYTAVSRPGLGEPRFISVGYVDDTQFVRFDSDAPDPRIEPTARWVEQEGPE 83

Query: 304  YWDEETRNAMGSAQTFRVNLNNLRGYYNQSEAGSHTLQSMYGCDVGPDWLFLRGYSQDAY 483
            YW +ET+    +AQ FRV LN LRGYYNQSEAGSHT+Q MYGCDVGPD L LRGY Q AY
Sbjct: 84   YWHQETQRTKDTAQFFRVYLNTLRGYYNQSEAGSHTVQEMYGCDVGPDGL-LRGYDQFAY 142

Query: 484  DGADYIALNEDLRSWTAADTAAQITKRKWEAADEAEQMRSYLEGACVEWLQKYLQMGNNT 663
            DG DYIALNEDLRSWTAADTAAQ+TK   EAA +A ++R YLEG CVEWL++YL  G +T
Sbjct: 143  DGRDYIALNEDLRSWTAADTAAQVTKHNAEAAGDAARVRIYLEGKCVEWLRRYLVTGKDT 202

Query: 664  LQRAEPPKTHVTRHPSSDLGVTLRCWALGFYPKEISLTWQREGQDQSQDMELVETRPSGD 843
            L RA+PPKTHV  HP SD  VTLRCWALGFYP+EISLTWQR+G+DQ+QDMELVETRPSGD
Sbjct: 203  LLRADPPKTHVAHHPISDREVTLRCWALGFYPEEISLTWQRDGEDQTQDMELVETRPSGD 262

Query: 844  GTFQKWAALVVPPGEEQSYTCHVQHEGLQEPLTLRWDPPQXXXXXXXXXXXXXXXXXXXX 1023
            GTFQKWAALVVP GEEQ YTCHVQHEGLQEPLTLRW+PPQ                    
Sbjct: 263  GTFQKWAALVVPSGEEQRYTCHVQHEGLQEPLTLRWEPPQPSIPIMGIIVGLVHLMVTGA 322

Query: 1024 XXXXXXXWRKKRSGEKGGSYTQAAGSDSAQGSDVSLT 1134
                   WRKK SGEKG  Y+QA+ SDS QGSDV LT
Sbjct: 323  MVTGAVIWRKKHSGEKGRIYSQASSSDSDQGSDVPLT 359


>ref|NP_001035644.1| major histocompatibility complex, class I, A [Bos taurus].
          Length = 362

 Score =  493 bits (1269), Expect = e-139
 Identities = 244/358 (68%), Positives = 267/358 (74%)
 Frame = +1

Query: 58   LRIMGPRXXXXXXXXXXXXXXXREGPHSLRYFDTAVSRPDRGKPRFISVGYVDDTQFVRF 237
            +R++GPR                 G HSLRYF TAVSRP  G+PRFISVGYVDDTQFVRF
Sbjct: 1    MRVVGPRTLLLLLPGALILTETWAGSHSLRYFYTAVSRPGLGEPRFISVGYVDDTQFVRF 60

Query: 238  DSDAPNPRMEPRAPWIEQEGQEYWDEETRNAMGSAQTFRVNLNNLRGYYNQSEAGSHTLQ 417
            DSDAP+PR+EP A W+EQEG EYW +ET+    +AQ FRV LN LRGYYNQSEAGSHT+Q
Sbjct: 61   DSDAPDPRIEPTARWVEQEGPEYWHQETQRTKDTAQFFRVYLNTLRGYYNQSEAGSHTVQ 120

Query: 418  SMYGCDVGPDWLFLRGYSQDAYDGADYIALNEDLRSWTAADTAAQITKRKWEAADEAEQM 597
             MYGCDVGPD L LRGY Q AYDG DYIALNEDLRSWTAADTAAQ+TK   EAA +A ++
Sbjct: 121  EMYGCDVGPDGL-LRGYDQFAYDGRDYIALNEDLRSWTAADTAAQVTKHNAEAAGDAARV 179

Query: 598  RSYLEGACVEWLQKYLQMGNNTLQRAEPPKTHVTRHPSSDLGVTLRCWALGFYPKEISLT 777
            R YLEG CVEWL++YL  G +TL RA+PPKTHV  HP SD  VTLRCWALGFYP EISLT
Sbjct: 180  RIYLEGKCVEWLRRYLVTGKDTLLRADPPKTHVAHHPISDHEVTLRCWALGFYPDEISLT 239

Query: 778  WQREGQDQSQDMELVETRPSGDGTFQKWAALVVPPGEEQSYTCHVQHEGLQEPLTLRWDP 957
            WQR+G+DQ+QDMELVETRPSGDGTFQKWAALVVP GEEQ YTCHVQHEGLQEPLTLRW+P
Sbjct: 240  WQRDGEDQTQDMELVETRPSGDGTFQKWAALVVPSGEEQRYTCHVQHEGLQEPLTLRWEP 299

Query: 958  PQXXXXXXXXXXXXXXXXXXXXXXXXXXXWRKKRSGEKGGSYTQAAGSDSAQGSDVSL 1131
            PQ                           WRKK SGEKG  YTQ A S S QGSDVSL
Sbjct: 300  PQPSIPIMGIIVGLVLLMVTGAVVTGAMIWRKKHSGEKGRGYTQTASSYSDQGSDVSL 357


>ref|NP_001035622.1| MHC class I heavy chain isoform 2 [Bos taurus].
          Length = 358

 Score =  491 bits (1265), Expect = e-139
 Identities = 246/356 (69%), Positives = 265/356 (74%)
 Frame = +1

Query: 67   MGPRXXXXXXXXXXXXXXXREGPHSLRYFDTAVSRPDRGKPRFISVGYVDDTQFVRFDSD 246
            MGPR                 G HSLRYF TAVSRP  G+PRFI+VGYVDDTQF RFDSD
Sbjct: 1    MGPRTLLLLLSGVLVLTETLAGSHSLRYFSTAVSRPGLGEPRFIAVGYVDDTQFTRFDSD 60

Query: 247  APNPRMEPRAPWIEQEGQEYWDEETRNAMGSAQTFRVNLNNLRGYYNQSEAGSHTLQSMY 426
            APNPR EPR PW+EQEG EYWD  TR    +AQTFRV LN LRGYYNQSEAGSHTLQ M 
Sbjct: 61   APNPREEPRVPWMEQEGLEYWDRNTRIYKDTAQTFRVYLNALRGYYNQSEAGSHTLQWMS 120

Query: 427  GCDVGPDWLFLRGYSQDAYDGADYIALNEDLRSWTAADTAAQITKRKWEAADEAEQMRSY 606
            GCDVGPD   LRG+ Q  YDG +YIALNEDLRSWTAADTAAQITKRKWEAA  AE  R+Y
Sbjct: 121  GCDVGPDGRLLRGFWQFGYDGRNYIALNEDLRSWTAADTAAQITKRKWEAAGAAEGERNY 180

Query: 607  LEGACVEWLQKYLQMGNNTLQRAEPPKTHVTRHPSSDLGVTLRCWALGFYPKEISLTWQR 786
            +EG CVE L++YL+ G + L RA+PPK HVT HP S+  VTLRCWALGFYP+EISLTWQR
Sbjct: 181  VEGRCVEGLRRYLENGKDALLRADPPKAHVTHHPISEREVTLRCWALGFYPEEISLTWQR 240

Query: 787  EGQDQSQDMELVETRPSGDGTFQKWAALVVPPGEEQSYTCHVQHEGLQEPLTLRWDPPQX 966
            EG+DQ+QDMELVETRPSGDGTFQKWAALVVP GEEQ YTC VQHEGLQEPLTLRW+PPQ 
Sbjct: 241  EGEDQTQDMELVETRPSGDGTFQKWAALVVPSGEEQRYTCRVQHEGLQEPLTLRWEPPQ- 299

Query: 967  XXXXXXXXXXXXXXXXXXXXXXXXXXWRKKRSGEKGGSYTQAAGSDSAQGSDVSLT 1134
                                      WRKKRSGEKG  YTQAA SDS QGSD+SLT
Sbjct: 300  -TSFLTMGIIVGLVLLVVAVVAGAVIWRKKRSGEKGRIYTQAASSDSTQGSDMSLT 354


>ref|XP_002697382.1| PREDICTED: MHC class I antigen clone 2 [Bos taurus].
          Length = 398

 Score =  491 bits (1265), Expect = e-139
 Identities = 243/343 (70%), Positives = 266/343 (77%)
 Frame = +1

Query: 136  HSLRYFDTAVSRPDRGKPRFISVGYVDDTQFVRFDSDAPNPRMEPRAPWIEQEGQEYWDE 315
            HSLRYF TAVSRP  G+PRFI VGYVDDT+FVRFDSDAP+PRMEPRA W+EQEG EYWD+
Sbjct: 52   HSLRYFYTAVSRPGLGEPRFIIVGYVDDTEFVRFDSDAPDPRMEPRARWVEQEGPEYWDQ 111

Query: 316  ETRNAMGSAQTFRVNLNNLRGYYNQSEAGSHTLQSMYGCDVGPDWLFLRGYSQDAYDGAD 495
            ETR A  +AQTFR NLN+LRGYYNQSEAGSHTLQ MYGCDVGPD   LRGY Q  YDG D
Sbjct: 112  ETRKAKDAAQTFRANLNSLRGYYNQSEAGSHTLQLMYGCDVGPDGSLLRGYEQYGYDGRD 171

Query: 496  YIALNEDLRSWTAADTAAQITKRKWEAADEAEQMRSYLEGACVEWLQKYLQMGNNTLQRA 675
            YIALNEDLRSWTAADTAAQI+KRK EAA +A ++R YL G CVE L++YL+ G  TL RA
Sbjct: 172  YIALNEDLRSWTAADTAAQISKRKVEAAGDAARVRIYLGGRCVESLRRYLETGKETLLRA 231

Query: 676  EPPKTHVTRHPSSDLGVTLRCWALGFYPKEISLTWQREGQDQSQDMELVETRPSGDGTFQ 855
            +PPK HVT HP S   VTLRCWALGFYP+EI LTWQ  G+DQ+QDMELVETRP GDG FQ
Sbjct: 232  DPPKAHVTHHPISGREVTLRCWALGFYPEEILLTWQHNGEDQTQDMELVETRPXGDGNFQ 291

Query: 856  KWAALVVPPGEEQSYTCHVQHEGLQEPLTLRWDPPQXXXXXXXXXXXXXXXXXXXXXXXX 1035
            KWAALVVP GEEQ YTCHVQHEGLQEPLTLRW+PPQ                        
Sbjct: 292  KWAALVVPSGEEQRYTCHVQHEGLQEPLTLRWEPPQ--TPFLTMGIIVGLVLLVVAVVAG 349

Query: 1036 XXXWRKKRSGEKGGSYTQAAGSDSAQGSDVSLTKDPRV*DSCL 1164
               WRKKRSGEKG +YTQA+ SDSAQGSDVSLT  P+    C+
Sbjct: 350  AVIWRKKRSGEKGRTYTQASSSDSAQGSDVSLTV-PKAASECI 391


  Database: RefSeq49_BP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 17,681,374
  Number of sequences in database:  33,088
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 75,703,924
Number of extensions: 2352452
Number of successful extensions: 14588
Number of sequences better than 1.0e-05: 67
Number of HSP's gapped: 14336
Number of HSP's successfully gapped: 67
Length of query: 639
Length of database: 17,681,374
Length adjustment: 109
Effective length of query: 530
Effective length of database: 14,074,782
Effective search space: 7459634460
Effective search space used: 7459634460
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

Search to RefSeqCP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-000642
         (1919 letters)

Database: RefSeq49_CP.fasta 
           33,336 sequences; 18,874,504 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001014767.1| MHC class I DLA-88 [Canis lupus familiaris].      483   e-136
Alignment   gi|NP_001014401.1| MHC class I DLA-12 [Canis lupus familiaris].      474   e-133
Alignment   gi|NP_001014400.1| MHC class I DLA-64 [Canis lupus familiaris].      441   e-123
Alignment   gi|XP_855624.1| PREDICTED: MHC class Ib [Canis familiaris].          396   e-110
Alignment   gi|NP_001018646.1| MHC class Ib [Canis lupus familiaris].            396   e-110
Alignment   gi|XP_536867.2| PREDICTED: similar to Zinc-alpha-2-glycoprotein...   198   1e-50
Alignment   gi|XP_533618.2| PREDICTED: similar to IgG receptor FcRn large s...   133   5e-31
Alignment   gi|NP_001014403.1| major histocompatibility complex, class II, ...    71   3e-12
Alignment   gi|XP_849737.1| PREDICTED: similar to HLA class II histocompati...    69   2e-11
Alignment   gi|XP_850173.1| PREDICTED: similar to T-cell surface glycoprote...    67   5e-11

>ref|NP_001014767.1| MHC class I DLA-88 [Canis lupus familiaris].
          Length = 361

 Score =  483 bits (1244), Expect = e-136
 Identities = 237/342 (69%), Positives = 264/342 (77%)
 Frame = +1

Query: 124  REGPHSLRYFDTAVSRPDRGKPRFISVGYVDDTQFVRFDSDAPNPRMEPRAPWIEQEGQE 303
            R G HSLRYF T+VSRP RG PRFI+VGYVDDTQFVRFDSDA   RMEPRAPW+EQEG E
Sbjct: 23   RAGSHSLRYFYTSVSRPGRGDPRFIAVGYVDDTQFVRFDSDAATGRMEPRAPWMEQEGPE 82

Query: 304  YWDEETRNAMGSAQTFRVNLNNLRGYYNQSEAGSHTLQSMYGCDVGPDWLFLRGYSQDAY 483
            YWD ETR    +AQ +RV+L+ LRGYYNQSEAGSHT Q+MYGCD+GP    LRGYSQDAY
Sbjct: 83   YWDRETRTVKETAQRYRVDLDTLRGYYNQSEAGSHTRQTMYGCDLGPGGRLLRGYSQDAY 142

Query: 484  DGADYIALNEDLRSWTAADTAAQITKRKWEAADEAEQMRSYLEGACVEWLQKYLQMGNNT 663
            DGADYIALNEDLRSWTAADTAAQIT+RKWEAA  AE  R+YLE  CVEWL++YL+MG  T
Sbjct: 143  DGADYIALNEDLRSWTAADTAAQITRRKWEAAGTAEHDRNYLETTCVEWLRRYLEMGKET 202

Query: 664  LQRAEPPKTHVTRHPSSDLGVTLRCWALGFYPKEISLTWQREGQDQSQDMELVETRPSGD 843
            L RAEPP T VTRHP SD  VTLRCWALGFYP EI+LTWQR+G+DQ+QD E+V+TRP+GD
Sbjct: 203  LLRAEPPSTRVTRHPISDHEVTLRCWALGFYPAEITLTWQRDGEDQTQDTEVVDTRPAGD 262

Query: 844  GTFQKWAALVVPPGEEQSYTCHVQHEGLQEPLTLRWDPPQXXXXXXXXXXXXXXXXXXXX 1023
            GTFQKWAA+VVP G+EQ YTCHVQHEGL EP+T RW+P                      
Sbjct: 263  GTFQKWAAVVVPSGQEQRYTCHVQHEGLAEPVTRRWEP--SPLSTIVIVSIAALVLLVVS 320

Query: 1024 XXXXXXXWRKKRSGEKGGSYTQAAGSDSAQGSDVSLTKDPRV 1149
                   WRK+RSG KG  Y+ AA  DSAQGSDVSLT  PRV
Sbjct: 321  GVIGAVIWRKQRSGGKGPGYSHAARDDSAQGSDVSLTA-PRV 361


>ref|NP_001014401.1| MHC class I DLA-12 [Canis lupus familiaris].
          Length = 358

 Score =  474 bits (1221), Expect = e-133
 Identities = 233/342 (68%), Positives = 263/342 (76%)
 Frame = +1

Query: 124  REGPHSLRYFDTAVSRPDRGKPRFISVGYVDDTQFVRFDSDAPNPRMEPRAPWIEQEGQE 303
            R G HSLRYF T+VSRP RG PRFI+VGYVDDTQFVRFDSDA   RMEPRAPW+EQEG E
Sbjct: 20   RAGSHSLRYFYTSVSRPGRGDPRFIAVGYVDDTQFVRFDSDAATGRMEPRAPWVEQEGPE 79

Query: 304  YWDEETRNAMGSAQTFRVNLNNLRGYYNQSEAGSHTLQSMYGCDVGPDWLFLRGYSQDAY 483
            YWD +TR    +A+TFRV+L+ LRGYYNQSEAGSHT Q M+GCD+GP    LRGYSQDAY
Sbjct: 80   YWDPQTRTIKETARTFRVDLDTLRGYYNQSEAGSHTFQWMFGCDLGPGGRLLRGYSQDAY 139

Query: 484  DGADYIALNEDLRSWTAADTAAQITKRKWEAADEAEQMRSYLEGACVEWLQKYLQMGNNT 663
            DGADYIALNEDLRSWTAAD AAQIT+RK EAA +A  +R+YLE  CVEWL++YL+MG  T
Sbjct: 140  DGADYIALNEDLRSWTAADAAAQITRRKREAAGDAGHLRNYLETTCVEWLRRYLEMGKET 199

Query: 664  LQRAEPPKTHVTRHPSSDLGVTLRCWALGFYPKEISLTWQREGQDQSQDMELVETRPSGD 843
            L RAEPP T VTRHP SD  VTLRCWALGFYP EI+LTWQR+G+DQ+QD E+V+TRP+GD
Sbjct: 200  LLRAEPPSTRVTRHPVSDHEVTLRCWALGFYPAEITLTWQRDGEDQTQDTEVVDTRPAGD 259

Query: 844  GTFQKWAALVVPPGEEQSYTCHVQHEGLQEPLTLRWDPPQXXXXXXXXXXXXXXXXXXXX 1023
            GTFQKWAA+VVP G+EQ YTCHVQHEGL EP+T RW+P                      
Sbjct: 260  GTFQKWAAVVVPSGQEQRYTCHVQHEGLVEPVTRRWEP--SPLSTIVIVSIAALVLLVVA 317

Query: 1024 XXXXXXXWRKKRSGEKGGSYTQAAGSDSAQGSDVSLTKDPRV 1149
                   WRK+RSG KG  Y+ AA  DSAQGSDVSLT  PRV
Sbjct: 318  GVIGAVIWRKQRSGGKGPGYSHAARDDSAQGSDVSLTA-PRV 358


>ref|NP_001014400.1| MHC class I DLA-64 [Canis lupus familiaris].
          Length = 361

 Score =  441 bits (1133), Expect = e-123
 Identities = 218/342 (63%), Positives = 252/342 (73%)
 Frame = +1

Query: 124  REGPHSLRYFDTAVSRPDRGKPRFISVGYVDDTQFVRFDSDAPNPRMEPRAPWIEQEGQE 303
            R G HSLR+F TAVSRP RG P +ISVGYVDDTQF+RF+SDA +P++EPRA W+EQEG E
Sbjct: 23   RAGSHSLRFFHTAVSRPGRGDPLYISVGYVDDTQFLRFNSDAASPKVEPRARWMEQEGPE 82

Query: 304  YWDEETRNAMGSAQTFRVNLNNLRGYYNQSEAGSHTLQSMYGCDVGPDWLFLRGYSQDAY 483
            +W+E+T  A   AQT R NL    GYYNQSEAGSHT Q   GCDVGPD   LRGY Q AY
Sbjct: 83   FWEEQTEIAKVHAQTSRSNLQTALGYYNQSEAGSHTFQWTSGCDVGPDGRLLRGYEQFAY 142

Query: 484  DGADYIALNEDLRSWTAADTAAQITKRKWEAADEAEQMRSYLEGACVEWLQKYLQMGNNT 663
            DGADY+AL+EDLRSWTAAD AAQIT+RKWEAA  A+  R YL+G CV+ L KYL+ G  T
Sbjct: 143  DGADYLALDEDLRSWTAADAAAQITRRKWEAAGAAQYYRVYLQGECVQSLLKYLERGKET 202

Query: 664  LQRAEPPKTHVTRHPSSDLGVTLRCWALGFYPKEISLTWQREGQDQSQDMELVETRPSGD 843
            LQ  +PPK ++TRHP SD  VTLRCWALGFYP EI+LTWQR+G+DQ+QD E+V+TRP+GD
Sbjct: 203  LQLTDPPKIYLTRHPISDHEVTLRCWALGFYPAEITLTWQRDGEDQTQDTEVVDTRPAGD 262

Query: 844  GTFQKWAALVVPPGEEQSYTCHVQHEGLQEPLTLRWDPPQXXXXXXXXXXXXXXXXXXXX 1023
            GTFQKWAA+VVP G+EQ YTCHVQHEGL EP+T RW+P                      
Sbjct: 263  GTFQKWAAVVVPSGQEQRYTCHVQHEGLAEPVTRRWEP--SPLSTIVIVSIAALVLLVVA 320

Query: 1024 XXXXXXXWRKKRSGEKGGSYTQAAGSDSAQGSDVSLTKDPRV 1149
                   WRK+RSG KG  Y+ AA  DSAQGSDVSLT  PRV
Sbjct: 321  GVIGAVIWRKQRSGGKGPGYSHAARDDSAQGSDVSLTA-PRV 361


>ref|XP_855624.1| PREDICTED: MHC class Ib [Canis familiaris].
          Length = 381

 Score =  396 bits (1018), Expect = e-110
 Identities = 197/352 (55%), Positives = 238/352 (67%), Gaps = 5/352 (1%)
 Frame = +1

Query: 130  GPHSLRYFDTAVSRPDRGKPRFISVGYVDDTQFVRFDSDAPNPRMEPRAPWIEQEGQEYW 309
            G HSLR+ +T VSRP  G+PR  +V YVDDT F RF+S+    R EP   W+EQEG EYW
Sbjct: 30   GSHSLRFLNTVVSRPGHGEPRHWAVAYVDDTPFERFNSEREGRRPEPLVRWLEQEGPEYW 89

Query: 310  DEETRNAMGSAQTFRVNLNNL-RGYYNQSEAGSHTLQSMYGCDVGPDWLFLRGYSQDAYD 486
            +E T N+    Q  R  LN + + Y NQS  GSHT Q++ GCDVGPD  FLRGY + AYD
Sbjct: 90   EERTLNSRTCTQVLRRTLNEVSQDYSNQSRTGSHTFQTITGCDVGPDGRFLRGYQRHAYD 149

Query: 487  GADYIALNEDLRSWTAADTAAQITKRKWEAADEAEQMRSYLEGACVEWLQKYLQMGNNTL 666
            G DYI L+EDLRSW   D  AQIT+RKW+AA  AE  +++LEG C+EWL+++L+ G  TL
Sbjct: 150  GLDYITLSEDLRSWIVEDPVAQITRRKWDAATVAENRKNFLEGRCLEWLRRHLENGRETL 209

Query: 667  QRAEPPKTHVTRHPSSDLGVTLRCWALGFYPKEISLTWQREGQDQSQDMELVETRPSGDG 846
            QRA+PPKT VTR P S+  VTL+CWALGFYP EI+LTWQR+G+DQ+QD ELVETRP GDG
Sbjct: 210  QRADPPKTSVTRRPISEHEVTLKCWALGFYPAEITLTWQRDGEDQTQDTELVETRPGGDG 269

Query: 847  TFQKWAALVVPPGEEQSYTCHVQHEGLQEPLTLRWD-PPQXXXXXXXXXXXXXXXXXXXX 1023
            TFQKWAA+VVP GEEQ YTCH+ H+ L +P+TLRW+ PPQ                    
Sbjct: 270  TFQKWAAVVVPSGEEQRYTCHILHKSLPKPITLRWEPPPQSTIPIVSIIAGLVLLVITGA 329

Query: 1024 XXXXXXXWRKKRSGEKGGSYTQAA---GSDSAQGSDVSLTKDPRV*DSCLVG 1170
                   WRKK SG KGGSY+QA    G  SAQ S +S+   P    SCLVG
Sbjct: 330  MLVGVVIWRKKHSGRKGGSYSQAENKYGGSSAQDSQMSVMA-PNEQASCLVG 380


>ref|NP_001018646.1| MHC class Ib [Canis lupus familiaris].
          Length = 381

 Score =  396 bits (1018), Expect = e-110
 Identities = 197/352 (55%), Positives = 238/352 (67%), Gaps = 5/352 (1%)
 Frame = +1

Query: 130  GPHSLRYFDTAVSRPDRGKPRFISVGYVDDTQFVRFDSDAPNPRMEPRAPWIEQEGQEYW 309
            G HSLR+ +T VSRP  G+PR  +V YVDDT F RF+S+    R EP   W+EQEG EYW
Sbjct: 30   GSHSLRFLNTVVSRPGHGEPRHWAVAYVDDTPFERFNSEREGRRPEPLVRWLEQEGPEYW 89

Query: 310  DEETRNAMGSAQTFRVNLNNL-RGYYNQSEAGSHTLQSMYGCDVGPDWLFLRGYSQDAYD 486
            +E T N+    Q  R  LN + + Y NQS  GSHT Q++ GCDVGPD  FLRGY + AYD
Sbjct: 90   EERTLNSRTCTQVLRRTLNEVSQDYSNQSRTGSHTFQTITGCDVGPDGRFLRGYQRHAYD 149

Query: 487  GADYIALNEDLRSWTAADTAAQITKRKWEAADEAEQMRSYLEGACVEWLQKYLQMGNNTL 666
            G DYI L+EDLRSW   D  AQIT+RKW+AA  AE  +++LEG C+EWL+++L+ G  TL
Sbjct: 150  GLDYITLSEDLRSWIVEDPVAQITRRKWDAATVAENRKNFLEGRCLEWLRRHLENGRETL 209

Query: 667  QRAEPPKTHVTRHPSSDLGVTLRCWALGFYPKEISLTWQREGQDQSQDMELVETRPSGDG 846
            QRA+PPKT VTR P S+  VTL+CWALGFYP EI+LTWQR+G+DQ+QD ELVETRP GDG
Sbjct: 210  QRADPPKTSVTRRPISEHEVTLKCWALGFYPAEITLTWQRDGEDQTQDTELVETRPGGDG 269

Query: 847  TFQKWAALVVPPGEEQSYTCHVQHEGLQEPLTLRWD-PPQXXXXXXXXXXXXXXXXXXXX 1023
            TFQKWAA+VVP GEEQ YTCH+ H+ L +P+TLRW+ PPQ                    
Sbjct: 270  TFQKWAAVVVPSGEEQRYTCHILHKSLTKPITLRWEPPPQSTIPIVSIIAGLVLLVITGA 329

Query: 1024 XXXXXXXWRKKRSGEKGGSYTQAA---GSDSAQGSDVSLTKDPRV*DSCLVG 1170
                   WRKK SG KGGSY+QA    G  SAQ S +S+   P    SCLVG
Sbjct: 330  MLVGVVIWRKKHSGRKGGSYSQAENKYGGSSAQDSQMSVMA-PNEQASCLVG 380


>ref|XP_536867.2| PREDICTED: similar to Zinc-alpha-2-glycoprotein precursor
           (Zn-alpha-2-glycoprotein) (Zn-alpha-2-GP) [Canis
           familiaris].
          Length = 315

 Score =  198 bits (504), Expect = 1e-50
 Identities = 106/287 (36%), Positives = 155/287 (54%), Gaps = 9/287 (3%)
 Frame = +1

Query: 130 GPHSLRYFDTAVSRPDRGKPRFISVGYVDDTQFVRFDSDAPNPRMEPRAPWIEQEGQEYW 309
           GP+SL +F T +SRP  G P F +  Y++D  F  +DS+    +  PR PW + EG E W
Sbjct: 26  GPYSLSFFYTGLSRPSDGFPSFQATAYLNDQDFFHYDSETG--KAIPRYPWSQMEGIEDW 83

Query: 310 DEETRNAMGSAQTFRVNLNNLRGYYNQSEAGSHTLQSMYGCDV------GPDWLFLRGYS 471
           ++E++        F V L ++  YY   E GSHT Q M+GC++      G  W +     
Sbjct: 84  EKESKLQKAREDIFMVTLKDIMEYYKDKE-GSHTFQGMFGCELQNNKNSGAFWRY----- 137

Query: 472 QDAYDGADYIALNEDLRSWTAADTAAQITKRKWEAADE-AEQMRSYLEGACVEWLQKYLQ 648
             AYDG ++I  N+++ +W   D AA  TK+KWEA +   ++ ++YLE  C   LQ+YL+
Sbjct: 138 --AYDGRNFIEFNKEIPAWVPQDPAALNTKKKWEAEEVYVQRAKAYLEEECPVMLQRYLE 195

Query: 649 MGNNTLQRAEPPKTHVTRHPSSDLGVTLRCWALGFYPKEISLTWQREGQDQSQDMELVET 828
            G   L R EPP   +T H + +   TL+CW  GFYP+EI L W  +  D  +       
Sbjct: 196 YGKTYLDRQEPPSVSITSHGTPEGIQTLKCWVSGFYPQEIDLHW-IQADDTQETKSGGAL 254

Query: 829 RPSGDGTFQKWAALVVPPGE--EQSYTCHVQHEGLQEPLTLRWDPPQ 963
            PSG+ T+Q W  +   P +    SY+C V+H  L +PLT+ WD  Q
Sbjct: 255 LPSGNNTYQAWVVMSASPQDLASFSYSCLVKHSSLSQPLTVLWDKRQ 301


>ref|XP_533618.2| PREDICTED: similar to IgG receptor FcRn large subunit p51 precursor
           (FcRn) (Neonatal Fc receptor) (IgG Fc fragment receptor
           transporter, alpha chain) [Canis familiaris].
          Length = 354

 Score =  133 bits (335), Expect = 5e-31
 Identities = 83/276 (30%), Positives = 134/276 (48%), Gaps = 2/276 (0%)
 Frame = +1

Query: 139 SLRYFDTAVSRPDRGKPRFISVGYVDDTQFVRFDSDAPNPRMEPRAPWI-EQEGQEYWDE 315
           SL Y  TAVS P  G P F + G++   Q++ +++     + EP   W+ E +   YW++
Sbjct: 28  SLLYHLTAVSAPPPGTPAFWASGWLGPQQYLSYNN--LRAQAEPYGAWVWENQVSWYWEK 85

Query: 316 ETRNAMGSAQTFRVNLNNLRGYYNQSEAGSHTLQSMYGCDVGPDWLFLRGYSQDAYDGAD 495
           ET +       F   L  L       + G +TLQ + GC++GPD   +   ++ A +G D
Sbjct: 86  ETTDLRTKEGLFLEALKAL------GDGGPYTLQGLLGCELGPDNTSVP-VAKFALNGED 138

Query: 496 YIALNEDLRSWTAADTAAQITKRKW-EAADEAEQMRSYLEGACVEWLQKYLQMGNNTLQR 672
           ++  +  L +W       +   ++W + A    + R++L  +C + L  +L+ G   L+ 
Sbjct: 139 FMTFDPKLGTWNGDWPETETVSKRWMQQAGAVSKERTFLLYSCPQRLLGHLERGRGNLEW 198

Query: 673 AEPPKTHVTRHPSSDLGVTLRCWALGFYPKEISLTWQREGQDQSQDMELVETRPSGDGTF 852
            EPP   +   P S     L C A  FYP E+ L + R G          +  P+GDG+F
Sbjct: 199 KEPPSMRLKARPGSPGFSVLTCSAFSFYPPELQLRFLRNGLAAGSGEG--DFGPNGDGSF 256

Query: 853 QKWAALVVPPGEEQSYTCHVQHEGLQEPLTLRWDPP 960
             W++L V  G+E  Y C VQH GL +PLT+  + P
Sbjct: 257 HAWSSLTVKSGDEHHYRCLVQHAGLPQPLTVELESP 292


>ref|NP_001014403.1| major histocompatibility complex, class II, DQ beta 1 [Canis lupus
           familiaris].
          Length = 269

 Score = 71.2 bits (173), Expect = 3e-12
 Identities = 47/165 (28%), Positives = 73/165 (44%), Gaps = 8/165 (4%)
 Frame = +1

Query: 481 YDGADYIALNEDLRSWTAADTAAQITKRKWEAA-DEAEQMRSYLEGACVEWLQKYLQMGN 657
           Y+  +++  + D+  + A     +     W    DE +++R+ L+  C      Y +   
Sbjct: 64  YNREEFVRFDSDVGEFRAVTELGRPDAEYWNRQKDEMDRVRAELDTVC---RHNYGREEL 120

Query: 658 NTLQRAEPP-------KTHVTRHPSSDLGVTLRCWALGFYPKEISLTWQREGQDQSQDME 816
            TLQR   P       KT V  H +      L C    FYP +I + W R  Q+Q+  + 
Sbjct: 121 TTLQRRVEPTVTIFPSKTEVLNHHN-----LLVCSVTDFYPGQIKVRWFRNDQEQTAGVV 175

Query: 817 LVETRPSGDGTFQKWAALVVPPGEEQSYTCHVQHEGLQEPLTLRW 951
                 +GD TFQ    L + P     YTCHV+H  LQ P+T++W
Sbjct: 176 STPLIRNGDWTFQILVMLEMTPQRGDVYTCHVEHASLQSPITVQW 220


>ref|XP_849737.1| PREDICTED: similar to HLA class II histocompatibility antigen, DM
           beta chain precursor (MHC class II antigen DMB) [Canis
           familiaris].
          Length = 263

 Score = 68.6 bits (166), Expect = 2e-11
 Identities = 34/99 (34%), Positives = 52/99 (52%), Gaps = 3/99 (3%)
 Frame = +1

Query: 670 RAEPPKTHVTRHP--SSDLGVTLRCWALGFYPKEISLTWQREGQD-QSQDMELVETRPSG 840
           R  PP   V +    ++   V L C+  GFYP +++++W++ GQ   S    L   +P+G
Sbjct: 111 RTRPPTVQVAKSTPFNTKESVMLACYVWGFYPADVTISWRKNGQPVPSHSSALNMAQPNG 170

Query: 841 DGTFQKWAALVVPPGEEQSYTCHVQHEGLQEPLTLRWDP 957
           D T+Q  + L   P  E +YTC V+H G  EP+   W P
Sbjct: 171 DWTYQTVSHLATTPSYEDTYTCVVEHIGAPEPVCEDWTP 209


>ref|XP_850173.1| PREDICTED: similar to T-cell surface glycoprotein CD1a precursor
           (CD1a antigen) (T-cell surface antigen T6/Leu-6) (hTa1
           thymocyte antigen) isoform 1 [Canis familiaris].
          Length = 357

 Score = 67.4 bits (163), Expect = 5e-11
 Identities = 51/189 (26%), Positives = 82/189 (43%), Gaps = 6/189 (3%)
 Frame = +1

Query: 412 LQSMYGCDVGPDWLFLRGYSQDAYDGADYIALNEDLRSWTAA----DTAAQITKRKWEAA 579
           +Q   GC++     F  G+ + AY G D I       SW  +      A Q +    +  
Sbjct: 114 VQMEIGCELRIGEPF-SGFMRYAYQGTDLIRFQNT--SWRPSPKGGSRAQQASSVFNQYH 170

Query: 580 DEAEQMRSYLEGACVEWLQKYLQMGNNTLQRAEPPKTHVTRHPSSDLG-VTLRCWALGFY 756
           ++ E     + G C  ++   L +G   LQR   P+  ++  PS   G + L C   GFY
Sbjct: 171 EDNEFTHELITGYCPRYVLSLLDVGKADLQRQVRPEAWLSAGPSPGPGRLQLVCHVSGFY 230

Query: 757 PKEISLTWQREGQDQSQDMELVETRPSGDGTFQKWAALVVPPGEEQSYTCHVQHEGL-QE 933
           PK + + W R G+ + Q  +  +  P  DGT+    +L V   E    +C V+H  L  +
Sbjct: 231 PKPVQVMWMR-GEQEQQGTQRGDVLPHADGTWYLQVSLDVKAKEAAGLSCRVRHSSLGGQ 289

Query: 934 PLTLRWDPP 960
            + L W+ P
Sbjct: 290 DMVLHWEQP 298


  Database: RefSeq49_CP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,874,504
  Number of sequences in database:  33,336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 79,088,803
Number of extensions: 2431552
Number of successful extensions: 15042
Number of sequences better than 1.0e-05: 25
Number of HSP's gapped: 14714
Number of HSP's successfully gapped: 28
Length of query: 639
Length of database: 18,874,504
Length adjustment: 109
Effective length of query: 530
Effective length of database: 15,240,880
Effective search space: 8077666400
Effective search space used: 8077666400
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

Search to RefSeqHP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-000642
         (1919 letters)

Database: RefSeq49_HP.fasta 
           32,964 sequences; 18,297,164 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_002107.3| HLA class I histocompatibility antigen, A-1 alp...   498   e-140
Alignment   gi|NP_001229687.1| HLA class I histocompatibility antigen, A-1 ...   485   e-137
Alignment   gi|NP_005505.2| major histocompatibility complex, class I, B pr...   484   e-137
Alignment   gi|NP_001229971.1| HLA class I histocompatibility antigen, Cw-1...   484   e-136
Alignment   gi|NP_002108.4| HLA class I histocompatibility antigen, Cw-1 al...   478   e-135
Alignment   gi|NP_005507.3| HLA class I histocompatibility antigen, alpha c...   460   e-129
Alignment   gi|NP_002118.1| HLA class I histocompatibility antigen, alpha c...   443   e-124
Alignment   gi|NP_001091949.1| HLA class I histocompatibility antigen, alph...   427   e-119
Alignment   gi|NP_061823.2| HLA class I histocompatibility antigen, alpha c...   426   e-119
Alignment   gi|NP_001091948.1| HLA class I histocompatibility antigen, alph...   259   6e-69

>ref|NP_002107.3| HLA class I histocompatibility antigen, A-1 alpha chain precursor
            [Homo sapiens].
          Length = 365

 Score =  498 bits (1281), Expect = e-140
 Identities = 242/361 (67%), Positives = 270/361 (74%), Gaps = 2/361 (0%)
 Frame = +1

Query: 58   LRIMGPRXXXXXXXXXXXXXXXREGPHSLRYFDTAVSRPDRGKPRFISVGYVDDTQFVRF 237
            + +M PR                 G HS+RYF T+VSRP RG+PRFI+VGYVDDTQFVRF
Sbjct: 1    MAVMAPRTLLLLLSGALALTQTWAGSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRF 60

Query: 238  DSDAPNPRMEPRAPWIEQEGQEYWDEETRNAMGSAQTFRVNLNNLRGYYNQSEAGSHTLQ 417
            DSDA + RMEPRAPWIEQEG EYWD+ETRN    +QT RV+L  LRGYYNQSEAGSHT+Q
Sbjct: 61   DSDAASQRMEPRAPWIEQEGPEYWDQETRNVKAQSQTDRVDLGTLRGYYNQSEAGSHTIQ 120

Query: 418  SMYGCDVGPDWLFLRGYSQDAYDGADYIALNEDLRSWTAADTAAQITKRKWEAADEAEQM 597
             MYGCDVG D  FLRGY QDAYDG DYIALNEDLRSWTAAD AAQITKRKWEAA EAEQ+
Sbjct: 121  IMYGCDVGSDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMAAQITKRKWEAAHEAEQL 180

Query: 598  RSYLEGACVEWLQKYLQMGNNTLQRAEPPKTHVTRHPSSDLGVTLRCWALGFYPKEISLT 777
            R+YL+G CVEWL++YL+ G  TLQR +PPKTH+T HP SD   TLRCWALGFYP EI+LT
Sbjct: 181  RAYLDGTCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHEATLRCWALGFYPAEITLT 240

Query: 778  WQREGQDQSQDMELVETRPSGDGTFQKWAALVVPPGEEQSYTCHVQHEGLQEPLTLRWD- 954
            WQR+G+DQ+QD ELVETRP+GDGTFQKWAA+VVP GEEQ YTCHVQHEGL +PLTLRW+ 
Sbjct: 241  WQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWEL 300

Query: 955  -PPQXXXXXXXXXXXXXXXXXXXXXXXXXXXWRKKRSGEKGGSYTQAAGSDSAQGSDVSL 1131
                                           WR+K S  KGGSYTQAA SDSAQGSDVSL
Sbjct: 301  SSQPTIPIVGIIAGLVLLGAVITGAVVAAVMWRRKSSDRKGGSYTQAASSDSAQGSDVSL 360

Query: 1132 T 1134
            T
Sbjct: 361  T 361


>ref|NP_001229687.1| HLA class I histocompatibility antigen, A-1 alpha chain precursor
            [Homo sapiens].
          Length = 365

 Score =  485 bits (1249), Expect = e-137
 Identities = 238/361 (65%), Positives = 264/361 (73%), Gaps = 2/361 (0%)
 Frame = +1

Query: 58   LRIMGPRXXXXXXXXXXXXXXXREGPHSLRYFDTAVSRPDRGKPRFISVGYVDDTQFVRF 237
            + +M PR                 G HS+RYF T+VSRP RG+PRFI+VGYVDDTQFVRF
Sbjct: 1    MAVMAPRTLLLLLSGALALTQTWAGSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRF 60

Query: 238  DSDAPNPRMEPRAPWIEQEGQEYWDEETRNAMGSAQTFRVNLNNLRGYYNQSEAGSHTLQ 417
            DSDA + +MEPRAPWIEQEG EYWD+ETRN    +QT R NL  LRGYYNQSE GSHT+Q
Sbjct: 61   DSDAASQKMEPRAPWIEQEGPEYWDQETRNMKAHSQTDRANLGTLRGYYNQSEDGSHTIQ 120

Query: 418  SMYGCDVGPDWLFLRGYSQDAYDGADYIALNEDLRSWTAADTAAQITKRKWEAADEAEQM 597
             MYGCDVGPD  FLRGY QDAYDG DYIALNEDLRSWTAAD AAQITKRKWEA   AEQ 
Sbjct: 121  IMYGCDVGPDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMAAQITKRKWEAVHAAEQR 180

Query: 598  RSYLEGACVEWLQKYLQMGNNTLQRAEPPKTHVTRHPSSDLGVTLRCWALGFYPKEISLT 777
            R YLEG CV+ L++YL+ G  TLQR +PPKTH+T HP SD   TLRCWALGFYP EI+LT
Sbjct: 181  RVYLEGRCVDGLRRYLENGKETLQRTDPPKTHMTHHPISDHEATLRCWALGFYPAEITLT 240

Query: 778  WQREGQDQSQDMELVETRPSGDGTFQKWAALVVPPGEEQSYTCHVQHEGLQEPLTLRWD- 954
            WQR+G+DQ+QD ELVETRP+GDGTFQKWAA+VVP GEEQ YTCHVQHEGL +PLTLRW+ 
Sbjct: 241  WQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWEL 300

Query: 955  -PPQXXXXXXXXXXXXXXXXXXXXXXXXXXXWRKKRSGEKGGSYTQAAGSDSAQGSDVSL 1131
                                           WR+K S  KGGSYTQAA SDSAQGSDVSL
Sbjct: 301  SSQPTIPIVGIIAGLVLLGAVITGAVVAAVMWRRKSSDRKGGSYTQAASSDSAQGSDVSL 360

Query: 1132 T 1134
            T
Sbjct: 361  T 361


>ref|NP_005505.2| major histocompatibility complex, class I, B precursor [Homo
            sapiens].
          Length = 362

 Score =  484 bits (1247), Expect = e-137
 Identities = 241/359 (67%), Positives = 267/359 (74%), Gaps = 2/359 (0%)
 Frame = +1

Query: 64   IMGPRXXXXXXXXXXXXXXXREGPHSLRYFDTAVSRPDRGKPRFISVGYVDDTQFVRFDS 243
            +M PR                 G HS+RYF T+VSRP RG+PRFISVGYVDDTQFVRFDS
Sbjct: 3    VMAPRTVLLLLSAALALTETWAGSHSMRYFYTSVSRPGRGEPRFISVGYVDDTQFVRFDS 62

Query: 244  DAPNPRMEPRAPWIEQEGQEYWDEETRNAMGSAQTFRVNLNNLRGYYNQSEAGSHTLQSM 423
            DA +PR EPRAPWIEQEG EYWD  T+     AQT R +L NLRGYYNQSEAGSHTLQSM
Sbjct: 63   DAASPREEPRAPWIEQEGPEYWDRNTQIYKAQAQTDRESLRNLRGYYNQSEAGSHTLQSM 122

Query: 424  YGCDVGPDWLFLRGYSQDAYDGADYIALNEDLRSWTAADTAAQITKRKWEAADEAEQMRS 603
            YGCDVGPD   LRG+ Q AYDG DYIALNEDLRSWTAADTAAQIT+RKWEAA EAEQ R+
Sbjct: 123  YGCDVGPDGRLLRGHDQYAYDGKDYIALNEDLRSWTAADTAAQITQRKWEAAREAEQRRA 182

Query: 604  YLEGACVEWLQKYLQMGNNTLQRAEPPKTHVTRHPSSDLGVTLRCWALGFYPKEISLTWQ 783
            YLEG CVEWL++YL+ G + L+RA+PPKTHVT HP SD   TLRCWALGFYP EI+LTWQ
Sbjct: 183  YLEGECVEWLRRYLENGKDKLERADPPKTHVTHHPISDHEATLRCWALGFYPAEITLTWQ 242

Query: 784  REGQDQSQDMELVETRPSGDGTFQKWAALVVPPGEEQSYTCHVQHEGLQEPLTLRWDP-- 957
            R+G+DQ+QD ELVETRP+GD TFQKWAA+VVP GEEQ YTCHVQHEGL +PLTLRW+P  
Sbjct: 243  RDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWEPSS 302

Query: 958  PQXXXXXXXXXXXXXXXXXXXXXXXXXXXWRKKRSGEKGGSYTQAAGSDSAQGSDVSLT 1134
                                          R+K SG KGGSY+QAA SDSAQGSDVSLT
Sbjct: 303  QSTVPIVGIVAGLAVLAVVVIGAVVAAVMCRRKSSGGKGGSYSQAACSDSAQGSDVSLT 361


>ref|NP_001229971.1| HLA class I histocompatibility antigen, Cw-1 alpha chain precursor
            [Homo sapiens].
          Length = 366

 Score =  484 bits (1245), Expect = e-136
 Identities = 240/361 (66%), Positives = 267/361 (73%), Gaps = 3/361 (0%)
 Frame = +1

Query: 58   LRIMGPRXXXXXXXXXXXXXXXREGPHSLRYFDTAVSRPDRGKPRFISVGYVDDTQFVRF 237
            +R+M PR                   HS+RYFDTAVSRP RG+PRFISVGYVDDTQFVRF
Sbjct: 1    MRVMAPRALLLLLSGGLALTETWACSHSMRYFDTAVSRPGRGEPRFISVGYVDDTQFVRF 60

Query: 238  DSDAPNPRMEPRAPWIEQEGQEYWDEETRNAMGSAQTFRVNLNNLRGYYNQSEAGSHTLQ 417
            DSDA +PR EPRAPW+EQEG EYWD ET+N    AQ  RV+L NLRGYYNQSE GSHTLQ
Sbjct: 61   DSDAASPRGEPRAPWVEQEGPEYWDRETQNYKRQAQADRVSLRNLRGYYNQSEDGSHTLQ 120

Query: 418  SMYGCDVGPDWLFLRGYSQDAYDGADYIALNEDLRSWTAADTAAQITKRKWEAADEAEQM 597
             MYGCD+GPD   LRGY Q AYDG DYIALNEDLRSWTAADTAAQIT+RK EAA  AEQ+
Sbjct: 121  RMYGCDLGPDGRLLRGYDQSAYDGKDYIALNEDLRSWTAADTAAQITQRKLEAARAAEQL 180

Query: 598  RSYLEGACVEWLQKYLQMGNNTLQRAEPPKTHVTRHPSSDLGVTLRCWALGFYPKEISLT 777
            R+YLEG CVEWL++YL+ G  TLQRAEPPKTHVT HP SD   TLRCWALGFYP EI+LT
Sbjct: 181  RAYLEGTCVEWLRRYLENGKETLQRAEPPKTHVTHHPLSDHEATLRCWALGFYPAEITLT 240

Query: 778  WQREGQDQSQDMELVETRPSGDGTFQKWAALVVPPGEEQSYTCHVQHEGLQEPLTLRWDP 957
            WQR+G+DQ+QD ELVETRP+GDGTFQKWAA+VVP G+EQ YTCH+QHEGLQEPLTL W+P
Sbjct: 241  WQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGQEQRYTCHMQHEGLQEPLTLSWEP 300

Query: 958  ---PQXXXXXXXXXXXXXXXXXXXXXXXXXXXWRKKRSGEKGGSYTQAAGSDSAQGSDVS 1128
               P                             R+K SG KGGS +QAA S+SAQGSD S
Sbjct: 301  SSQPTIPIMGIVAGLAVLVVLAVLGAVVTAMMCRRKSSGGKGGSCSQAACSNSAQGSDES 360

Query: 1129 L 1131
            L
Sbjct: 361  L 361


>ref|NP_002108.4| HLA class I histocompatibility antigen, Cw-1 alpha chain precursor
            [Homo sapiens].
          Length = 366

 Score =  478 bits (1230), Expect = e-135
 Identities = 238/361 (65%), Positives = 265/361 (73%), Gaps = 3/361 (0%)
 Frame = +1

Query: 58   LRIMGPRXXXXXXXXXXXXXXXREGPHSLRYFDTAVSRPDRGKPRFISVGYVDDTQFVRF 237
            +R+M PR                   HS+RYFDTAVSRP RG+PRFISVGYVDDTQFVRF
Sbjct: 1    MRVMAPRALLLLLSGGLALTETWACSHSMRYFDTAVSRPGRGEPRFISVGYVDDTQFVRF 60

Query: 238  DSDAPNPRMEPRAPWIEQEGQEYWDEETRNAMGSAQTFRVNLNNLRGYYNQSEAGSHTLQ 417
            DSDA +PR EPRAPW+EQEG EYWD ET+     AQ  RV+L NLRGYYNQSE GSHTLQ
Sbjct: 61   DSDAASPRGEPRAPWVEQEGPEYWDRETQKYKRQAQADRVSLRNLRGYYNQSEDGSHTLQ 120

Query: 418  SMYGCDVGPDWLFLRGYSQDAYDGADYIALNEDLRSWTAADTAAQITKRKWEAADEAEQM 597
             M GCD+GPD   LRGY Q AYDG DYIALNEDLRSWTAADTAAQIT+RK EAA  AEQ+
Sbjct: 121  RMSGCDLGPDGRLLRGYDQSAYDGKDYIALNEDLRSWTAADTAAQITQRKLEAARAAEQL 180

Query: 598  RSYLEGACVEWLQKYLQMGNNTLQRAEPPKTHVTRHPSSDLGVTLRCWALGFYPKEISLT 777
            R+YLEG CVEWL++YL+ G  TLQRAEPPKTHVT HP SD   TLRCWALGFYP EI+LT
Sbjct: 181  RAYLEGTCVEWLRRYLENGKETLQRAEPPKTHVTHHPLSDHEATLRCWALGFYPAEITLT 240

Query: 778  WQREGQDQSQDMELVETRPSGDGTFQKWAALVVPPGEEQSYTCHVQHEGLQEPLTLRWDP 957
            WQR+G+DQ+QD ELVETRP+GDGTFQKWAA+VVP G+EQ YTCH+QHEGLQEPLTL W+P
Sbjct: 241  WQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGQEQRYTCHMQHEGLQEPLTLSWEP 300

Query: 958  ---PQXXXXXXXXXXXXXXXXXXXXXXXXXXXWRKKRSGEKGGSYTQAAGSDSAQGSDVS 1128
               P                             R+K SG KGGS +QAA S+SAQGSD S
Sbjct: 301  SSQPTIPIMGIVAGLAVLVVLAVLGAVVTAMMCRRKSSGGKGGSCSQAACSNSAQGSDES 360

Query: 1129 L 1131
            L
Sbjct: 361  L 361


>ref|NP_005507.3| HLA class I histocompatibility antigen, alpha chain E precursor [Homo
            sapiens].
          Length = 358

 Score =  460 bits (1184), Expect = e-129
 Identities = 222/333 (66%), Positives = 250/333 (75%), Gaps = 2/333 (0%)
 Frame = +1

Query: 130  GPHSLRYFDTAVSRPDRGKPRFISVGYVDDTQFVRFDSDAPNPRMEPRAPWIEQEGQEYW 309
            G HSL+YF T+VSRP RG+PRFISVGYVDDTQFVRFD+DA +PRM PRAPW+EQEG EYW
Sbjct: 22   GSHSLKYFHTSVSRPGRGEPRFISVGYVDDTQFVRFDNDAASPRMVPRAPWMEQEGSEYW 81

Query: 310  DEETRNAMGSAQTFRVNLNNLRGYYNQSEAGSHTLQSMYGCDVGPDWLFLRGYSQDAYDG 489
            D ETR+A  +AQ FRVNL  LRGYYNQSEAGSHTLQ M+GC++GPD  FLRGY Q AYDG
Sbjct: 82   DRETRSARDTAQIFRVNLRTLRGYYNQSEAGSHTLQWMHGCELGPDGRFLRGYEQFAYDG 141

Query: 490  ADYIALNEDLRSWTAADTAAQITKRKWEAADEAEQMRSYLEGACVEWLQKYLQMGNNTLQ 669
             DY+ LNEDLRSWTA DTAAQI+++K   A EAE  R+YLE  CVEWL KYL+ G  TL 
Sbjct: 142  KDYLTLNEDLRSWTAVDTAAQISEQKSNDASEAEHQRAYLEDTCVEWLHKYLEKGKETLL 201

Query: 670  RAEPPKTHVTRHPSSDLGVTLRCWALGFYPKEISLTWQREGQDQSQDMELVETRPSGDGT 849
              EPPKTHVT HP SD   TLRCWALGFYP EI+LTWQ++G+  +QD ELVETRP+GDGT
Sbjct: 202  HLEPPKTHVTHHPISDHEATLRCWALGFYPAEITLTWQQDGEGHTQDTELVETRPAGDGT 261

Query: 850  FQKWAALVVPPGEEQSYTCHVQHEGLQEPLTLRWDPPQ--XXXXXXXXXXXXXXXXXXXX 1023
            FQKWAA+VVP GEEQ YTCHVQHEGL EP+TLRW P                        
Sbjct: 262  FQKWAAVVVPSGEEQRYTCHVQHEGLPEPVTLRWKPASQPTIPIVGIIAGLVLLGSVVSG 321

Query: 1024 XXXXXXXWRKKRSGEKGGSYTQAAGSDSAQGSD 1122
                   WRKK SG KGGSY++A  SDSAQGS+
Sbjct: 322  AVVAAVIWRKKSSGGKGGSYSKAEWSDSAQGSE 354


>ref|NP_002118.1| HLA class I histocompatibility antigen, alpha chain G precursor
           [Homo sapiens].
          Length = 338

 Score =  443 bits (1140), Expect = e-124
 Identities = 210/296 (70%), Positives = 233/296 (78%)
 Frame = +1

Query: 64  IMGPRXXXXXXXXXXXXXXXREGPHSLRYFDTAVSRPDRGKPRFISVGYVDDTQFVRFDS 243
           +M PR                 G HS+RYF  AVSRP RG+PRFI++GYVDDTQFVRFDS
Sbjct: 3   VMAPRTLFLLLSGALTLTETWAGSHSMRYFSAAVSRPGRGEPRFIAMGYVDDTQFVRFDS 62

Query: 244 DAPNPRMEPRAPWIEQEGQEYWDEETRNAMGSAQTFRVNLNNLRGYYNQSEAGSHTLQSM 423
           D+  PRMEPRAPW+EQEG EYW+EETRN    AQT R+NL  LRGYYNQSEA SHTLQ M
Sbjct: 63  DSACPRMEPRAPWVEQEGPEYWEEETRNTKAHAQTDRMNLQTLRGYYNQSEASSHTLQWM 122

Query: 424 YGCDVGPDWLFLRGYSQDAYDGADYIALNEDLRSWTAADTAAQITKRKWEAADEAEQMRS 603
            GCD+G D   LRGY Q AYDG DY+ALNEDLRSWTAADTAAQI+KRK EAA+ AEQ R+
Sbjct: 123 IGCDLGSDGRLLRGYEQYAYDGKDYLALNEDLRSWTAADTAAQISKRKCEAANVAEQRRA 182

Query: 604 YLEGACVEWLQKYLQMGNNTLQRAEPPKTHVTRHPSSDLGVTLRCWALGFYPKEISLTWQ 783
           YLEG CVEWL +YL+ G   LQRA+PPKTHVT HP  D   TLRCWALGFYP EI LTWQ
Sbjct: 183 YLEGTCVEWLHRYLENGKEMLQRADPPKTHVTHHPVFDYEATLRCWALGFYPAEIILTWQ 242

Query: 784 REGQDQSQDMELVETRPSGDGTFQKWAALVVPPGEEQSYTCHVQHEGLQEPLTLRW 951
           R+G+DQ+QD+ELVETRP+GDGTFQKWAA+VVP GEEQ YTCHVQHEGL EPL LRW
Sbjct: 243 RDGEDQTQDVELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPLMLRW 298


>ref|NP_001091949.1| HLA class I histocompatibility antigen, alpha chain F isoform 1
            precursor [Homo sapiens].
          Length = 442

 Score =  427 bits (1099), Expect = e-119
 Identities = 209/332 (62%), Positives = 240/332 (72%), Gaps = 2/332 (0%)
 Frame = +1

Query: 130  GPHSLRYFDTAVSRPDRGKPRFISVGYVDDTQFVRFDSDAPNPRMEPRAPWIEQEGQEYW 309
            G HSLRYF TAVSRP RG+PR+I+V YVDDTQF+RFDSDA  PRMEPR PW+EQEG +YW
Sbjct: 22   GSHSLRYFSTAVSRPGRGEPRYIAVEYVDDTQFLRFDSDAAIPRMEPREPWVEQEGPQYW 81

Query: 310  DEETRNAMGSAQTFRVNLNNLRGYYNQSEAGSHTLQSMYGCDVGPDWLFLRGYSQDAYDG 489
            +  T  A  +AQT RV L NL   YNQSEAGSHTLQ M GCD+GPD   LRGY Q AYDG
Sbjct: 82   EWTTGYAKANAQTDRVALRNLLRRYNQSEAGSHTLQGMNGCDMGPDGRLLRGYHQHAYDG 141

Query: 490  ADYIALNEDLRSWTAADTAAQITKRKWEAADEAEQMRSYLEGACVEWLQKYLQMGNNTLQ 669
             DYI+LNEDLRSWTAADT AQIT+R +EA + AE+ R+YLEG C+E L++YL+ G  TLQ
Sbjct: 142  KDYISLNEDLRSWTAADTVAQITQRFYEAEEYAEEFRTYLEGECLELLRRYLENGKETLQ 201

Query: 670  RAEPPKTHVTRHPSSDLGVTLRCWALGFYPKEISLTWQREGQDQSQDMELVETRPSGDGT 849
            RA+PPK HV  HP SD   TLRCWALGFYP EI+LTWQR+G++Q+QD ELVETRP+GDGT
Sbjct: 202  RADPPKAHVAHHPISDHEATLRCWALGFYPAEITLTWQRDGEEQTQDTELVETRPAGDGT 261

Query: 850  FQKWAALVVPPGEEQSYTCHVQHEGLQEPLTLRWD--PPQXXXXXXXXXXXXXXXXXXXX 1023
            FQKWAA+VVPPGEEQ YTCHVQHEGL +PL LRW+  P                      
Sbjct: 262  FQKWAAVVVPPGEEQRYTCHVQHEGLPQPLILRWEQSPQPTIPIVGIVAGLVVLGAVVTG 321

Query: 1024 XXXXXXXWRKKRSGEKGGSYTQAAGSDSAQGS 1119
                   WRKK S    GSY+QAA      G+
Sbjct: 322  AVVAAVMWRKKSSDRNRGSYSQAAAYSVVSGN 353


>ref|NP_061823.2| HLA class I histocompatibility antigen, alpha chain F isoform 2
            precursor [Homo sapiens].
          Length = 346

 Score =  426 bits (1096), Expect = e-119
 Identities = 208/324 (64%), Positives = 238/324 (73%), Gaps = 2/324 (0%)
 Frame = +1

Query: 130  GPHSLRYFDTAVSRPDRGKPRFISVGYVDDTQFVRFDSDAPNPRMEPRAPWIEQEGQEYW 309
            G HSLRYF TAVSRP RG+PR+I+V YVDDTQF+RFDSDA  PRMEPR PW+EQEG +YW
Sbjct: 22   GSHSLRYFSTAVSRPGRGEPRYIAVEYVDDTQFLRFDSDAAIPRMEPREPWVEQEGPQYW 81

Query: 310  DEETRNAMGSAQTFRVNLNNLRGYYNQSEAGSHTLQSMYGCDVGPDWLFLRGYSQDAYDG 489
            +  T  A  +AQT RV L NL   YNQSEAGSHTLQ M GCD+GPD   LRGY Q AYDG
Sbjct: 82   EWTTGYAKANAQTDRVALRNLLRRYNQSEAGSHTLQGMNGCDMGPDGRLLRGYHQHAYDG 141

Query: 490  ADYIALNEDLRSWTAADTAAQITKRKWEAADEAEQMRSYLEGACVEWLQKYLQMGNNTLQ 669
             DYI+LNEDLRSWTAADT AQIT+R +EA + AE+ R+YLEG C+E L++YL+ G  TLQ
Sbjct: 142  KDYISLNEDLRSWTAADTVAQITQRFYEAEEYAEEFRTYLEGECLELLRRYLENGKETLQ 201

Query: 670  RAEPPKTHVTRHPSSDLGVTLRCWALGFYPKEISLTWQREGQDQSQDMELVETRPSGDGT 849
            RA+PPK HV  HP SD   TLRCWALGFYP EI+LTWQR+G++Q+QD ELVETRP+GDGT
Sbjct: 202  RADPPKAHVAHHPISDHEATLRCWALGFYPAEITLTWQRDGEEQTQDTELVETRPAGDGT 261

Query: 850  FQKWAALVVPPGEEQSYTCHVQHEGLQEPLTLRWD--PPQXXXXXXXXXXXXXXXXXXXX 1023
            FQKWAA+VVPPGEEQ YTCHVQHEGL +PL LRW+  P                      
Sbjct: 262  FQKWAAVVVPPGEEQRYTCHVQHEGLPQPLILRWEQSPQPTIPIVGIVAGLVVLGAVVTG 321

Query: 1024 XXXXXXXWRKKRSGEKGGSYTQAA 1095
                   WRKK S    GSY+QAA
Sbjct: 322  AVVAAVMWRKKSSDRNRGSYSQAA 345


>ref|NP_001091948.1| HLA class I histocompatibility antigen, alpha chain F isoform 3
           precursor [Homo sapiens].
          Length = 254

 Score =  259 bits (662), Expect = 6e-69
 Identities = 126/183 (68%), Positives = 145/183 (79%)
 Frame = +1

Query: 130 GPHSLRYFDTAVSRPDRGKPRFISVGYVDDTQFVRFDSDAPNPRMEPRAPWIEQEGQEYW 309
           G HSLRYF TAVSRP RG+PR+I+V YVDDTQF+RFDSDA  PRMEPR PW+EQEG +YW
Sbjct: 22  GSHSLRYFSTAVSRPGRGEPRYIAVEYVDDTQFLRFDSDAAIPRMEPREPWVEQEGPQYW 81

Query: 310 DEETRNAMGSAQTFRVNLNNLRGYYNQSEAGSHTLQSMYGCDVGPDWLFLRGYSQDAYDG 489
           +  T  A  +AQT RV L NL   YNQSEAGSHTLQ M GCD+GPD   LRGY Q AYDG
Sbjct: 82  EWTTGYAKANAQTDRVALRNLLRRYNQSEAGSHTLQGMNGCDMGPDGRLLRGYHQHAYDG 141

Query: 490 ADYIALNEDLRSWTAADTAAQITKRKWEAADEAEQMRSYLEGACVEWLQKYLQMGNNTLQ 669
            DYI+LNEDLRSWTAADT AQIT+R +EA + AE+ R+YLEG C+E L++YL+ G  TLQ
Sbjct: 142 KDYISLNEDLRSWTAADTVAQITQRFYEAEEYAEEFRTYLEGECLELLRRYLENGKETLQ 201

Query: 670 RAE 678
           RAE
Sbjct: 202 RAE 204


  Database: RefSeq49_HP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,297,164
  Number of sequences in database:  32,964
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 77,176,749
Number of extensions: 2351564
Number of successful extensions: 13966
Number of sequences better than 1.0e-05: 76
Number of HSP's gapped: 13716
Number of HSP's successfully gapped: 82
Length of query: 639
Length of database: 18,297,164
Length adjustment: 109
Effective length of query: 530
Effective length of database: 14,704,088
Effective search space: 7793166640
Effective search space used: 7793166640
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

Search to RefSeqMP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-000642
         (1919 letters)

Database: RefSeq49_MP.fasta 
           30,036 sequences; 15,617,559 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_001473611.1| PREDICTED: h-2 class I histocompatibility an...   436   e-122
Alignment   gi|XP_003086103.1| PREDICTED: h-2 class I histocompatibility an...   434   e-122
Alignment   gi|XP_001473590.1| PREDICTED: h-2 class I histocompatibility an...   434   e-122
Alignment   gi|XP_003086102.1| PREDICTED: h-2 class I histocompatibility an...   434   e-121
Alignment   gi|XP_003086104.1| PREDICTED: h-2 class I histocompatibility an...   433   e-121
Alignment   gi|NP_034528.1| H-2 class I histocompatibility antigen, D-37 al...   433   e-121
Alignment   gi|NP_034521.1| H-2 class I histocompatibility antigen, Q10 alp...   431   e-120
Alignment   gi|NP_034510.3| H-2 class I histocompatibility antigen, L-D alp...   430   e-120
Alignment   gi|XP_003086847.1| PREDICTED: h-2 class I histocompatibility an...   425   e-119
Alignment   gi|NP_001074501.2| hypothetical protein LOC667977 [Mus musculus].    424   e-119

>ref|XP_001473611.1| PREDICTED: h-2 class I histocompatibility antigen, K-W28 alpha
            chain-like isoform 2 [Mus musculus].
          Length = 368

 Score =  436 bits (1121), Expect = e-122
 Identities = 212/338 (62%), Positives = 248/338 (73%), Gaps = 2/338 (0%)
 Frame = +1

Query: 124  REGPHSLRYFDTAVSRPDRGKPRFISVGYVDDTQFVRFDSDAPNPRMEPRAPWIEQEGQE 303
            R GPHSLRYF TAVSRP  G+PRFI+VGYVDDTQFVRFDSDA NPR EPRAPW+EQEG E
Sbjct: 20   RAGPHSLRYFVTAVSRPGLGEPRFIAVGYVDDTQFVRFDSDADNPRFEPRAPWMEQEGPE 79

Query: 304  YWDEETRNAMGSAQTFRVNLNNLRGYYNQSEAGSHTLQSMYGCDVGPDWLFLRGYSQDAY 483
            YW+E+T+ A    Q FRV+L   + YYNQS+ GSHT Q M+GCDVG DW  LRGY Q AY
Sbjct: 80   YWEEQTQRAKSDEQWFRVSLRTAQRYYNQSKGGSHTFQRMFGCDVGSDWRLLRGYQQFAY 139

Query: 484  DGADYIALNEDLRSWTAADTAAQITKRKWEAADEAEQMRSYLEGACVEWLQKYLQMGNNT 663
            DG DYIALNEDL++WTAADTAA IT+RKWE A +AE  R+YLEG CVEWL++YL++GN T
Sbjct: 140  DGRDYIALNEDLKTWTAADTAALITRRKWEQAGDAEYYRAYLEGECVEWLRRYLELGNET 199

Query: 664  LQRAEPPKTHVTRHPSSDLGVTLRCWALGFYPKEISLTWQREGQDQSQDMELVETRPSGD 843
            L R + PK HVT HP S + VTLRCWALGFYP +I+LTWQ  G+D ++DMELVETRP+GD
Sbjct: 200  LLRTDSPKAHVTYHPRSQVDVTLRCWALGFYPADITLTWQLNGEDLTEDMELVETRPAGD 259

Query: 844  GTFQKWAALVVPPGEEQSYTCHVQHEGLQEPLTLRWD-PPQXXXXXXXXXXXXXXXXXXX 1020
            GTFQKWAA+VVP G+EQ+YTCHV H+GL EPLTLRW  PP                    
Sbjct: 260  GTFQKWAAVVVPLGKEQNYTCHVHHKGLPEPLTLRWKLPPSTVSNTVIIAVLVVLGAAIV 319

Query: 1021 XXXXXXXXWRKKR-SGEKGGSYTQAAGSDSAQGSDVSL 1131
                     + +R +G KG +Y  A GS   Q SD+SL
Sbjct: 320  TGAVVAFVMKMRRNTGGKGVNYALAPGS---QTSDLSL 354


>ref|XP_003086103.1| PREDICTED: h-2 class I histocompatibility antigen, K-W28 alpha
            chain-like [Mus musculus].
          Length = 380

 Score =  434 bits (1117), Expect = e-122
 Identities = 211/336 (62%), Positives = 247/336 (73%), Gaps = 2/336 (0%)
 Frame = +1

Query: 130  GPHSLRYFDTAVSRPDRGKPRFISVGYVDDTQFVRFDSDAPNPRMEPRAPWIEQEGQEYW 309
            GPHSLRYF TAVSRP  G+PRFI+VGYVDDTQFVRFDSDA NPR EPRAPW+EQEG EYW
Sbjct: 34   GPHSLRYFVTAVSRPGLGEPRFIAVGYVDDTQFVRFDSDADNPRFEPRAPWMEQEGPEYW 93

Query: 310  DEETRNAMGSAQTFRVNLNNLRGYYNQSEAGSHTLQSMYGCDVGPDWLFLRGYSQDAYDG 489
            +E+T+ A    Q FRV+L   + YYNQS+ GSHT Q M+GCDVG DW  LRGY Q AYDG
Sbjct: 94   EEQTQRAKSDEQWFRVSLRTAQRYYNQSKGGSHTFQRMFGCDVGSDWRLLRGYQQFAYDG 153

Query: 490  ADYIALNEDLRSWTAADTAAQITKRKWEAADEAEQMRSYLEGACVEWLQKYLQMGNNTLQ 669
             DYIALNEDL++WTAADTAA IT+RKWE A +AE  R+YLEG CVEWL++YL++GN TL 
Sbjct: 154  RDYIALNEDLKTWTAADTAALITRRKWEQAGDAEYYRAYLEGECVEWLRRYLELGNETLL 213

Query: 670  RAEPPKTHVTRHPSSDLGVTLRCWALGFYPKEISLTWQREGQDQSQDMELVETRPSGDGT 849
            R + PK HVT HP S + VTLRCWALGFYP +I+LTWQ  G+D ++DMELVETRP+GDGT
Sbjct: 214  RTDSPKAHVTYHPRSQVDVTLRCWALGFYPADITLTWQLNGEDLTEDMELVETRPAGDGT 273

Query: 850  FQKWAALVVPPGEEQSYTCHVQHEGLQEPLTLRWD-PPQXXXXXXXXXXXXXXXXXXXXX 1026
            FQKWAA+VVP G+EQ+YTCHV H+GL EPLTLRW  PP                      
Sbjct: 274  FQKWAAVVVPLGKEQNYTCHVHHKGLPEPLTLRWKLPPSTVSNTVIIAVLVVLGAAIVTG 333

Query: 1027 XXXXXXWRKKR-SGEKGGSYTQAAGSDSAQGSDVSL 1131
                   + +R +G KG +Y  A GS   Q SD+SL
Sbjct: 334  AVVAFVMKMRRNTGGKGVNYALAPGS---QTSDLSL 366


>ref|XP_001473590.1| PREDICTED: h-2 class I histocompatibility antigen, K-W28 alpha
            chain-like isoform 1 [Mus musculus].
          Length = 385

 Score =  434 bits (1117), Expect = e-122
 Identities = 211/336 (62%), Positives = 247/336 (73%), Gaps = 2/336 (0%)
 Frame = +1

Query: 130  GPHSLRYFDTAVSRPDRGKPRFISVGYVDDTQFVRFDSDAPNPRMEPRAPWIEQEGQEYW 309
            GPHSLRYF TAVSRP  G+PRFI+VGYVDDTQFVRFDSDA NPR EPRAPW+EQEG EYW
Sbjct: 39   GPHSLRYFVTAVSRPGLGEPRFIAVGYVDDTQFVRFDSDADNPRFEPRAPWMEQEGPEYW 98

Query: 310  DEETRNAMGSAQTFRVNLNNLRGYYNQSEAGSHTLQSMYGCDVGPDWLFLRGYSQDAYDG 489
            +E+T+ A    Q FRV+L   + YYNQS+ GSHT Q M+GCDVG DW  LRGY Q AYDG
Sbjct: 99   EEQTQRAKSDEQWFRVSLRTAQRYYNQSKGGSHTFQRMFGCDVGSDWRLLRGYQQFAYDG 158

Query: 490  ADYIALNEDLRSWTAADTAAQITKRKWEAADEAEQMRSYLEGACVEWLQKYLQMGNNTLQ 669
             DYIALNEDL++WTAADTAA IT+RKWE A +AE  R+YLEG CVEWL++YL++GN TL 
Sbjct: 159  RDYIALNEDLKTWTAADTAALITRRKWEQAGDAEYYRAYLEGECVEWLRRYLELGNETLL 218

Query: 670  RAEPPKTHVTRHPSSDLGVTLRCWALGFYPKEISLTWQREGQDQSQDMELVETRPSGDGT 849
            R + PK HVT HP S + VTLRCWALGFYP +I+LTWQ  G+D ++DMELVETRP+GDGT
Sbjct: 219  RTDSPKAHVTYHPRSQVDVTLRCWALGFYPADITLTWQLNGEDLTEDMELVETRPAGDGT 278

Query: 850  FQKWAALVVPPGEEQSYTCHVQHEGLQEPLTLRWD-PPQXXXXXXXXXXXXXXXXXXXXX 1026
            FQKWAA+VVP G+EQ+YTCHV H+GL EPLTLRW  PP                      
Sbjct: 279  FQKWAAVVVPLGKEQNYTCHVHHKGLPEPLTLRWKLPPSTVSNTVIIAVLVVLGAAIVTG 338

Query: 1027 XXXXXXWRKKR-SGEKGGSYTQAAGSDSAQGSDVSL 1131
                   + +R +G KG +Y  A GS   Q SD+SL
Sbjct: 339  AVVAFVMKMRRNTGGKGVNYALAPGS---QTSDLSL 371


>ref|XP_003086102.1| PREDICTED: h-2 class I histocompatibility antigen, K-W28 alpha
           chain-like [Mus musculus].
          Length = 370

 Score =  434 bits (1115), Expect = e-121
 Identities = 198/279 (70%), Positives = 229/279 (82%)
 Frame = +1

Query: 124 REGPHSLRYFDTAVSRPDRGKPRFISVGYVDDTQFVRFDSDAPNPRMEPRAPWIEQEGQE 303
           R GPHSLRYF TAVSRP  G+PRFI+VGYVDDTQFVRFDSDA NPR EPRAPW+EQEG E
Sbjct: 20  RAGPHSLRYFVTAVSRPGLGEPRFIAVGYVDDTQFVRFDSDADNPRFEPRAPWMEQEGPE 79

Query: 304 YWDEETRNAMGSAQTFRVNLNNLRGYYNQSEAGSHTLQSMYGCDVGPDWLFLRGYSQDAY 483
           YW+E+T+ A    Q FRV+L   + YYNQS+ GSHT Q M+GCDVG DW  LRGY Q AY
Sbjct: 80  YWEEQTQRAKSDEQWFRVSLRTAQRYYNQSKGGSHTFQRMFGCDVGSDWRLLRGYQQFAY 139

Query: 484 DGADYIALNEDLRSWTAADTAAQITKRKWEAADEAEQMRSYLEGACVEWLQKYLQMGNNT 663
           DG DYIALNEDL++WTAADTAA IT+RKWE A +AE  R+YLEG CVEWL++YL++GN T
Sbjct: 140 DGRDYIALNEDLKTWTAADTAALITRRKWEQAGDAEYYRAYLEGECVEWLRRYLELGNET 199

Query: 664 LQRAEPPKTHVTRHPSSDLGVTLRCWALGFYPKEISLTWQREGQDQSQDMELVETRPSGD 843
           L R + PK HVT HP S + VTLRCWALGFYP +I+LTWQ  G+D ++DMELVETRP+GD
Sbjct: 200 LLRTDSPKAHVTYHPRSQVDVTLRCWALGFYPADITLTWQLNGEDLTEDMELVETRPAGD 259

Query: 844 GTFQKWAALVVPPGEEQSYTCHVQHEGLQEPLTLRWDPP 960
           GTFQKWAA+VVP G+EQ+YTCHV H+GL EPLTLRW  P
Sbjct: 260 GTFQKWAAVVVPLGKEQNYTCHVHHKGLPEPLTLRWKLP 298


>ref|XP_003086104.1| PREDICTED: h-2 class I histocompatibility antigen, K-W28 alpha
            chain-like [Mus musculus].
          Length = 370

 Score =  433 bits (1113), Expect = e-121
 Identities = 211/337 (62%), Positives = 247/337 (73%), Gaps = 2/337 (0%)
 Frame = +1

Query: 127  EGPHSLRYFDTAVSRPDRGKPRFISVGYVDDTQFVRFDSDAPNPRMEPRAPWIEQEGQEY 306
            E PHSLRYF TAVSRP  G+PRFI+VGYVDDTQFVRFDSDA NPR EPRAPW+EQEG EY
Sbjct: 23   ECPHSLRYFVTAVSRPGLGEPRFIAVGYVDDTQFVRFDSDADNPRFEPRAPWMEQEGPEY 82

Query: 307  WDEETRNAMGSAQTFRVNLNNLRGYYNQSEAGSHTLQSMYGCDVGPDWLFLRGYSQDAYD 486
            W+E+T+ A    Q FRV+L   + YYNQS+ GSHT Q M+GCDVG DW  LRGY Q AYD
Sbjct: 83   WEEQTQRAKSDEQWFRVSLRTAQRYYNQSKGGSHTFQRMFGCDVGSDWRLLRGYQQFAYD 142

Query: 487  GADYIALNEDLRSWTAADTAAQITKRKWEAADEAEQMRSYLEGACVEWLQKYLQMGNNTL 666
            G DYIALNEDL++WTAADTAA IT+RKWE A +AE  R+YLEG CVEWL++YL++GN TL
Sbjct: 143  GRDYIALNEDLKTWTAADTAALITRRKWEQAGDAEYYRAYLEGECVEWLRRYLELGNETL 202

Query: 667  QRAEPPKTHVTRHPSSDLGVTLRCWALGFYPKEISLTWQREGQDQSQDMELVETRPSGDG 846
             R + PK HVT HP S + VTLRCWALGFYP +I+LTWQ  G+D ++DMELVETRP+GDG
Sbjct: 203  LRTDSPKAHVTYHPRSQVDVTLRCWALGFYPADITLTWQLNGEDLTEDMELVETRPAGDG 262

Query: 847  TFQKWAALVVPPGEEQSYTCHVQHEGLQEPLTLRWD-PPQXXXXXXXXXXXXXXXXXXXX 1023
            TFQKWAA+VVP G+EQ+YTCHV H+GL EPLTLRW  PP                     
Sbjct: 263  TFQKWAAVVVPLGKEQNYTCHVHHKGLPEPLTLRWKLPPSTVSNTVIIAVLVVLGAAIVT 322

Query: 1024 XXXXXXXWRKKR-SGEKGGSYTQAAGSDSAQGSDVSL 1131
                    + +R +G KG +Y  A GS   Q SD+SL
Sbjct: 323  GAVVAFVMKMRRNTGGKGVNYALAPGS---QTSDLSL 356


>ref|NP_034528.1| H-2 class I histocompatibility antigen, D-37 alpha chain precursor
           [Mus musculus].
          Length = 357

 Score =  433 bits (1113), Expect = e-121
 Identities = 202/279 (72%), Positives = 227/279 (81%)
 Frame = +1

Query: 124 REGPHSLRYFDTAVSRPDRGKPRFISVGYVDDTQFVRFDSDAPNPRMEPRAPWIEQEGQE 303
           +  PHSLRYF TAVSRP  G+PRFI VGYVDDTQFVRFDSDA NPRMEPRA WIEQEG E
Sbjct: 19  QSSPHSLRYFTTAVSRPGLGEPRFIIVGYVDDTQFVRFDSDAENPRMEPRARWIEQEGPE 78

Query: 304 YWDEETRNAMGSAQTFRVNLNNLRGYYNQSEAGSHTLQSMYGCDVGPDWLFLRGYSQDAY 483
           YW+ ET  A    + FRVNL  L GYYNQS   SHTLQ MYGCDVGPD   LRGY Q+AY
Sbjct: 79  YWERETWKARDMGRNFRVNLRTLLGYYNQSNDESHTLQWMYGCDVGPDGRLLRGYCQEAY 138

Query: 484 DGADYIALNEDLRSWTAADTAAQITKRKWEAADEAEQMRSYLEGACVEWLQKYLQMGNNT 663
           DG DYI+LNEDLRSWTA D A+QI+K K EA DEA Q R+YL+G CVEWL +YL++GN T
Sbjct: 139 DGQDYISLNEDLRSWTANDIASQISKHKSEAVDEAHQQRAYLQGPCVEWLHRYLRLGNET 198

Query: 664 LQRAEPPKTHVTRHPSSDLGVTLRCWALGFYPKEISLTWQREGQDQSQDMELVETRPSGD 843
           LQR++PPK HVT HP S+  VTLRCWALGFYP +I+LTWQ  G++ +QDMELVETRP+GD
Sbjct: 199 LQRSDPPKAHVTHHPRSEDEVTLRCWALGFYPADITLTWQLNGEELTQDMELVETRPAGD 258

Query: 844 GTFQKWAALVVPPGEEQSYTCHVQHEGLQEPLTLRWDPP 960
           GTFQKWAA+VVP G+EQ YTCHV HEGL EPLTLRW+PP
Sbjct: 259 GTFQKWAAVVVPLGKEQYYTCHVYHEGLPEPLTLRWEPP 297


>ref|NP_034521.1| H-2 class I histocompatibility antigen, Q10 alpha chain precursor
           [Mus musculus].
          Length = 325

 Score =  431 bits (1108), Expect = e-120
 Identities = 200/298 (67%), Positives = 233/298 (78%)
 Frame = +1

Query: 67  MGPRXXXXXXXXXXXXXXXREGPHSLRYFDTAVSRPDRGKPRFISVGYVDDTQFVRFDSD 246
           M PR               + G HS+RYF+T+VSRP  G+PRFI VGYVDDTQFVRFDSD
Sbjct: 4   MAPRTLLLLLAAALAPTQTQAGSHSMRYFETSVSRPGLGEPRFIIVGYVDDTQFVRFDSD 63

Query: 247 APNPRMEPRAPWIEQEGQEYWDEETRNAMGSAQTFRVNLNNLRGYYNQSEAGSHTLQSMY 426
           A  PRMEPRAPW+EQEG EYW+ ET+ A G+ Q+F V+L  L GYYNQSE+GSHT+Q MY
Sbjct: 64  AETPRMEPRAPWMEQEGPEYWERETQRAKGNEQSFHVSLRTLLGYYNQSESGSHTIQWMY 123

Query: 427 GCDVGPDWLFLRGYSQDAYDGADYIALNEDLRSWTAADTAAQITKRKWEAADEAEQMRSY 606
           GC VG D  FLRGY Q AYDG DYIALNEDL++WTAAD AA IT+RKWE A  AE  R+Y
Sbjct: 124 GCKVGSDGRFLRGYLQYAYDGRDYIALNEDLKTWTAADVAAIITRRKWEQAGAAEYYRAY 183

Query: 607 LEGACVEWLQKYLQMGNNTLQRAEPPKTHVTRHPSSDLGVTLRCWALGFYPKEISLTWQR 786
           LE  CVEWL +YL++G  TL R +PPKTHVT HP S+  VTLRCWALGFYP +I+LTWQ 
Sbjct: 184 LEAECVEWLLRYLELGKETLLRTDPPKTHVTHHPGSEGDVTLRCWALGFYPADITLTWQL 243

Query: 787 EGQDQSQDMELVETRPSGDGTFQKWAALVVPPGEEQSYTCHVQHEGLQEPLTLRWDPP 960
            G++ +QDMELVETRP+GDGTFQKWA++VVP G+EQ+YTCHV HEGL EPLTLRW+PP
Sbjct: 244 NGEELTQDMELVETRPAGDGTFQKWASVVVPLGKEQNYTCHVYHEGLPEPLTLRWEPP 301


>ref|NP_034510.3| H-2 class I histocompatibility antigen, L-D alpha chain precursor
            [Mus musculus].
          Length = 362

 Score =  430 bits (1105), Expect = e-120
 Identities = 209/353 (59%), Positives = 245/353 (69%), Gaps = 2/353 (0%)
 Frame = +1

Query: 67   MGPRXXXXXXXXXXXXXXXREGPHSLRYFDTAVSRPDRGKPRFISVGYVDDTQFVRFDSD 246
            M PR               R GPHS+RYF+TAVSRP   +PR+ISVGYVD+ +FVRFDSD
Sbjct: 4    MAPRTLLLLLAAALAPTQTRAGPHSMRYFETAVSRPGLEEPRYISVGYVDNKEFVRFDSD 63

Query: 247  APNPRMEPRAPWIEQEGQEYWDEETRNAMGSAQTFRVNLNNLRGYYNQSEAGSHTLQSMY 426
            A NPR EPRAPW+EQEG EYW+ ET+ A G  Q FRV+L NL GYYNQS  GSHTLQ M 
Sbjct: 64   AENPRYEPRAPWMEQEGPEYWERETQKAKGQEQWFRVSLRNLLGYYNQSAGGSHTLQQMS 123

Query: 427  GCDVGPDWLFLRGYSQDAYDGADYIALNEDLRSWTAADTAAQITKRKWEAADEAEQMRSY 606
            GCD+G DW  LRGY Q AY+G DYIALNEDL++WTAAD AAQIT+RKWE +  AE  ++Y
Sbjct: 124  GCDLGSDWRLLRGYLQFAYEGRDYIALNEDLKTWTAADMAAQITRRKWEQSGAAEHYKAY 183

Query: 607  LEGACVEWLQKYLQMGNNTLQRAEPPKTHVTRHPSSDLGVTLRCWALGFYPKEISLTWQR 786
            LEG CVEWL +YL+ GN TL R + PK HVT HP S   VTLRCWALGFYP +I+LTWQ 
Sbjct: 184  LEGECVEWLHRYLKNGNATLLRTDSPKAHVTHHPRSKGEVTLRCWALGFYPADITLTWQL 243

Query: 787  EGQDQSQDMELVETRPSGDGTFQKWAALVVPPGEEQSYTCHVQHEGLQEPLTLRWDPPQX 966
             G++ +QDMELVETRP+GDGTFQKWA++VVP G+EQ+YTC V HEGL EPLTLRW+PP  
Sbjct: 244  NGEELTQDMELVETRPAGDGTFQKWASVVVPLGKEQNYTCRVYHEGLPEPLTLRWEPPPS 303

Query: 967  XXXXXXXXXXXXXXXXXXXXXXXXXXWRKKR--SGEKGGSYTQAAGSDSAQGS 1119
                                        K+R  +G KGG Y  A GS S++ S
Sbjct: 304  TDSYMVIVAVLGVLGAMAIIGAVVAFVMKRRRNTGGKGGDYALAPGSQSSEMS 356


>ref|XP_003086847.1| PREDICTED: h-2 class I histocompatibility antigen, D-37 alpha
            chain-like [Mus musculus].
          Length = 377

 Score =  425 bits (1092), Expect = e-119
 Identities = 207/331 (62%), Positives = 237/331 (71%), Gaps = 2/331 (0%)
 Frame = +1

Query: 136  HSLRYFDTAVSRPDRGKPRFISVGYVDDTQFVRFDSDAPNPRMEPRAPWIEQEGQEYWDE 315
            HSLRYF T VSRP  G+PRFI VGYVDDTQFVRFDSD+ NPRMEPRA WIEQEG EYW+ 
Sbjct: 42   HSLRYFHTVVSRPGLGEPRFIIVGYVDDTQFVRFDSDSENPRMEPRARWIEQEGPEYWER 101

Query: 316  ETRNAMGSAQTFRVNLNNLRGYYNQSEAGSHTLQSMYGCDVGPDWLFLRGYSQDAYDGAD 495
            ETR A    + FRVNL  L GYYNQS+  SHTLQ MYGCDVGPD   LRGY Q+AYDG D
Sbjct: 102  ETRKARDMGRNFRVNLRTLLGYYNQSKDESHTLQWMYGCDVGPDGRLLRGYCQEAYDGQD 161

Query: 496  YIALNEDLRSWTAADTAAQITKRKWEAADEAEQMRSYLEGACVEWLQKYLQMGNNTLQRA 675
            YI+LNEDLRSWTA + A+ I+K K EA DEA Q R+YL+G CVEWL  YLQ+G+ TL R+
Sbjct: 162  YISLNEDLRSWTATNLASHISKCKSEAVDEAHQQRAYLQGPCVEWLHTYLQLGSETLLRS 221

Query: 676  EPPKTHVTRHPSSDLGVTLRCWALGFYPKEISLTWQREGQDQSQDMELVETRPSGDGTFQ 855
            +PPK HVTRHP  +  VTLRCWALGFYP +I+LTWQ  G++ +QDMELVETRP+GDGTFQ
Sbjct: 222  DPPKAHVTRHPRPEGDVTLRCWALGFYPADITLTWQLNGEELTQDMELVETRPAGDGTFQ 281

Query: 856  KWAALVVPPGEEQSYTCHVQHEGLQEPLTLRWDPPQXXXXXXXXXXXXXXXXXXXXXXXX 1035
            KWA++VVP G+EQ+YTCHV HEGL EPLTLRW+PP                         
Sbjct: 282  KWASVVVPLGKEQNYTCHVYHEGLPEPLTLRWEPPPSTVSNMVIIAVLVVLGAVIVIVAV 341

Query: 1036 XXXWRKKRSGEKG--GSYTQAAGSDSAQGSD 1122
                 K+R  + G  G Y    GS S Q SD
Sbjct: 342  VAFVMKRRKTQVGVKGCYAHVLGSKSFQTSD 372


>ref|NP_001074501.2| hypothetical protein LOC667977 [Mus musculus].
          Length = 368

 Score =  424 bits (1091), Expect = e-119
 Identities = 205/338 (60%), Positives = 245/338 (72%), Gaps = 2/338 (0%)
 Frame = +1

Query: 124  REGPHSLRYFDTAVSRPDRGKPRFISVGYVDDTQFVRFDSDAPNPRMEPRAPWIEQEGQE 303
            R GPHS+RYF+TAVSRP  G+P FISVGYVDDTQFVRFD DA NPRMEPRAPW+EQEG E
Sbjct: 24   RPGPHSMRYFETAVSRPGLGEPWFISVGYVDDTQFVRFDGDAENPRMEPRAPWMEQEGPE 83

Query: 304  YWDEETRNAMGSAQTFRVNLNNLRGYYNQSEAGSHTLQSMYGCDVGPDWLFLRGYSQDAY 483
            YW+ ET+ A G  Q F+ +L NL  YYNQS  GSHT Q MYGCD+G D   LRGY Q AY
Sbjct: 84   YWERETQIAKGHEQGFQGSLRNLLHYYNQSAGGSHTFQRMYGCDLGSDGRLLRGYWQFAY 143

Query: 484  DGADYIALNEDLRSWTAADTAAQITKRKWEAADEAEQMRSYLEGACVEWLQKYLQMGNNT 663
            DG+DYIALN+DL++WTAAD AAQIT+R+WE    AE +R+YLE  C+EWL++YL++G  T
Sbjct: 144  DGSDYIALNQDLKTWTAADLAAQITRRRWEQGGVAETLRAYLEDPCLEWLRRYLELGKET 203

Query: 664  LQRAEPPKTHVTRHPSSDLGVTLRCWALGFYPKEISLTWQREGQDQSQDMELVETRPSGD 843
            L R +PPK HVT HP S+  VTLRCWALGFYP +I+LTWQ  G++ +QDMELVETRP+GD
Sbjct: 204  LLRTDPPKVHVTHHPRSEDDVTLRCWALGFYPADITLTWQLNGEELTQDMELVETRPAGD 263

Query: 844  GTFQKWAALVVPPGEEQSYTCHVQHEGLQEPLTLRWDP-PQXXXXXXXXXXXXXXXXXXX 1020
            GTFQKWA++VVP G+EQ+YTCHV HEGL EPLTLRW+P P                    
Sbjct: 264  GTFQKWASVVVPLGKEQNYTCHVYHEGLPEPLTLRWEPRPSRDSNMVIIAVLVVLGVVII 323

Query: 1021 XXXXXXXXWRKKRS-GEKGGSYTQAAGSDSAQGSDVSL 1131
                     + +R  G K  +Y  A GS+S QGS + L
Sbjct: 324  IGAMVPFVLKSRRKIGGKEENYALAGGSNSVQGSALFL 361


  Database: RefSeq49_MP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 15,617,559
  Number of sequences in database:  30,036
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 64,899,754
Number of extensions: 1935739
Number of successful extensions: 11064
Number of sequences better than 1.0e-05: 130
Number of HSP's gapped: 10832
Number of HSP's successfully gapped: 140
Length of query: 639
Length of database: 15,617,559
Length adjustment: 108
Effective length of query: 531
Effective length of database: 12,373,671
Effective search space: 6570419301
Effective search space used: 6570419301
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

Search to RefSeqSP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-000642
         (1919 letters)

Database: RefSeq49_SP.fasta 
           24,897 sequences; 11,343,932 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001090896.1| MHC class I antigen 3 [Sus scrofa].               656   0.0  
Alignment   gi|NP_001107174.1| MHC class I antigen 2 [Sus scrofa].               588   e-168
Alignment   gi|NP_001090900.1| MHC class I antigen 1 [Sus scrofa].               563   e-160
Alignment   gi|XP_003356639.1| PREDICTED: patr class I histocompatibility a...   560   e-160
Alignment   gi|XP_003128290.1| PREDICTED: patr class I histocompatibility a...   560   e-160
Alignment   gi|NP_001107528.1| MHC class I antigen 5 [Sus scrofa].               545   e-155
Alignment   gi|NP_998933.1| MHC class I antigen 7 [Sus scrofa].                  449   e-126
Alignment   gi|NP_001107175.1| MHC class I antigen 8 [Sus scrofa].               449   e-126
Alignment   gi|NP_001107176.1| MHC class I antigen 6 [Sus scrofa].               408   e-114
Alignment   gi|XP_003361021.1| PREDICTED: class I histocompatibility antige...   258   1e-68

>ref|NP_001090896.1| MHC class I antigen 3 [Sus scrofa].
          Length = 361

 Score =  656 bits (1693), Expect = 0.0
 Identities = 318/361 (88%), Positives = 318/361 (88%)
 Frame = +1

Query: 67   MGPRXXXXXXXXXXXXXXXREGPHSLRYFDTAVSRPDRGKPRFISVGYVDDTQFVRFDSD 246
            MGPR               REGPHSLRYFDTAVSRPDRGKPRFISVGYVDDTQFVRFDSD
Sbjct: 1    MGPRALFLLLSGTLALTGTREGPHSLRYFDTAVSRPDRGKPRFISVGYVDDTQFVRFDSD 60

Query: 247  APNPRMEPRAPWIEQEGQEYWDEETRNAMGSAQTFRVNLNNLRGYYNQSEAGSHTLQSMY 426
            APNPRMEPRAPWIEQEGQEYWDEETRNAMGSAQTFRVNLNNLRGYYNQSEAGSHTLQSMY
Sbjct: 61   APNPRMEPRAPWIEQEGQEYWDEETRNAMGSAQTFRVNLNNLRGYYNQSEAGSHTLQSMY 120

Query: 427  GCDVGPDWLFLRGYSQDAYDGADYIALNEDLRSWTAADTAAQITKRKWEAADEAEQMRSY 606
            GCDVGPDWLFLRGYSQDAYDGADYIALNEDLRSWTAADTAAQITKRKWEAADEAEQMRSY
Sbjct: 121  GCDVGPDWLFLRGYSQDAYDGADYIALNEDLRSWTAADTAAQITKRKWEAADEAEQMRSY 180

Query: 607  LEGACVEWLQKYLQMGNNTLQRAEPPKTHVTRHPSSDLGVTLRCWALGFYPKEISLTWQR 786
            LEGACVEWLQKYLQMGNNTLQRAEPPKTHVTRHPSSDLGVTLRCWALGFYPKEISLTWQR
Sbjct: 181  LEGACVEWLQKYLQMGNNTLQRAEPPKTHVTRHPSSDLGVTLRCWALGFYPKEISLTWQR 240

Query: 787  EGQDQSQDMELVETRPSGDGTFQKWAALVVPPGEEQSYTCHVQHEGLQEPLTLRWDPPQX 966
            EGQDQSQDMELVETRPSGDGTFQKWAALVVPPGEEQSYTCHVQHEGLQEPLTLRWDPPQ 
Sbjct: 241  EGQDQSQDMELVETRPSGDGTFQKWAALVVPPGEEQSYTCHVQHEGLQEPLTLRWDPPQP 300

Query: 967  XXXXXXXXXXXXXXXXXXXXXXXXXXWRKKRSGEKGGSYTQAAGSDSAQGSDVSLTKDPR 1146
                                      WRKKR GEKGGSYTQAAGSDSAQGSDVSLTKDPR
Sbjct: 301  PVPIVGIIVGLVLVLVAGAVVAGVVIWRKKRPGEKGGSYTQAAGSDSAQGSDVSLTKDPR 360

Query: 1147 V 1149
            V
Sbjct: 361  V 361


>ref|NP_001107174.1| MHC class I antigen 2 [Sus scrofa].
          Length = 364

 Score =  588 bits (1516), Expect = e-168
 Identities = 288/364 (79%), Positives = 298/364 (81%)
 Frame = +1

Query: 58   LRIMGPRXXXXXXXXXXXXXXXREGPHSLRYFDTAVSRPDRGKPRFISVGYVDDTQFVRF 237
            +R+ GP+                 GPHSL YF TAVSRPDRG  RFI+VGYVDDTQFVRF
Sbjct: 1    MRVRGPQAILILLSGALALTGTWAGPHSLSYFYTAVSRPDRGDSRFIAVGYVDDTQFVRF 60

Query: 238  DSDAPNPRMEPRAPWIEQEGQEYWDEETRNAMGSAQTFRVNLNNLRGYYNQSEAGSHTLQ 417
            DSDAPNPRMEPRAPWI+QEGQ+YWD ETRN MGSAQT RVNL  LRGYYNQSEAGSHT+Q
Sbjct: 61   DSDAPNPRMEPRAPWIQQEGQDYWDRETRNVMGSAQTDRVNLKTLRGYYNQSEAGSHTIQ 120

Query: 418  SMYGCDVGPDWLFLRGYSQDAYDGADYIALNEDLRSWTAADTAAQITKRKWEAADEAEQM 597
             MYGCDVGPD L LRGY QDAYDGADYIALNEDLRSWTAADTAAQITKRKWEAAD AE  
Sbjct: 121  VMYGCDVGPDGLLLRGYRQDAYDGADYIALNEDLRSWTAADTAAQITKRKWEAADAAEGE 180

Query: 598  RSYLEGACVEWLQKYLQMGNNTLQRAEPPKTHVTRHPSSDLGVTLRCWALGFYPKEISLT 777
            RSYL+G CVE LQKYL+MG +TLQRAEPPKTHVTRHPSSDLGVTLRCWALGFYPKEISLT
Sbjct: 181  RSYLQGLCVEGLQKYLEMGKDTLQRAEPPKTHVTRHPSSDLGVTLRCWALGFYPKEISLT 240

Query: 778  WQREGQDQSQDMELVETRPSGDGTFQKWAALVVPPGEEQSYTCHVQHEGLQEPLTLRWDP 957
            WQREGQDQSQDMELVETRPSGDGTFQKWAALVVPPGEEQSYTCHVQHEG QEP TLRWDP
Sbjct: 241  WQREGQDQSQDMELVETRPSGDGTFQKWAALVVPPGEEQSYTCHVQHEGPQEPRTLRWDP 300

Query: 958  PQXXXXXXXXXXXXXXXXXXXXXXXXXXXWRKKRSGEKGGSYTQAAGSDSAQGSDVSLTK 1137
            PQ                           WRKKRSGEKGGSYTQAAGSDSAQGSDVSLTK
Sbjct: 301  PQPPIPIVGIIVGLVLVLVAGAMVTGVVIWRKKRSGEKGGSYTQAAGSDSAQGSDVSLTK 360

Query: 1138 DPRV 1149
            DPRV
Sbjct: 361  DPRV 364


>ref|NP_001090900.1| MHC class I antigen 1 [Sus scrofa].
          Length = 361

 Score =  563 bits (1451), Expect = e-160
 Identities = 278/361 (77%), Positives = 291/361 (80%)
 Frame = +1

Query: 67   MGPRXXXXXXXXXXXXXXXREGPHSLRYFDTAVSRPDRGKPRFISVGYVDDTQFVRFDSD 246
            MGP                + GPHSL YF TAVSRPD G  RFI VGYVDDTQFVRFDSD
Sbjct: 1    MGPGALFLLLSGTLALTGTQAGPHSLSYFYTAVSRPDLGDSRFIEVGYVDDTQFVRFDSD 60

Query: 247  APNPRMEPRAPWIEQEGQEYWDEETRNAMGSAQTFRVNLNNLRGYYNQSEAGSHTLQSMY 426
            A NPRMEPRAPWIE+EGQ+YWDEETR    +AQ  RV+L  LRGYYNQSEAGSHTLQSM+
Sbjct: 61   ALNPRMEPRAPWIEKEGQDYWDEETRKVKETAQINRVDLKTLRGYYNQSEAGSHTLQSMF 120

Query: 427  GCDVGPDWLFLRGYSQDAYDGADYIALNEDLRSWTAADTAAQITKRKWEAADEAEQMRSY 606
            GC +GPD L LRGY QDAYDGADYIALNEDLRSWTAADTAAQITKRKWEAADEAEQ RSY
Sbjct: 121  GCYLGPDGLLLRGYRQDAYDGADYIALNEDLRSWTAADTAAQITKRKWEAADEAEQWRSY 180

Query: 607  LEGACVEWLQKYLQMGNNTLQRAEPPKTHVTRHPSSDLGVTLRCWALGFYPKEISLTWQR 786
            L+G CVE L++YL+MG +TLQRA+PPKTHVTRHPSSDLGVTLRCWALGFYPKEISLTWQR
Sbjct: 181  LQGLCVESLREYLEMGKDTLQRADPPKTHVTRHPSSDLGVTLRCWALGFYPKEISLTWQR 240

Query: 787  EGQDQSQDMELVETRPSGDGTFQKWAALVVPPGEEQSYTCHVQHEGLQEPLTLRWDPPQX 966
            EGQDQSQDMELVETRPSGDGTFQKWAALVVPPGEEQSYTCHVQHEGLQEPLTLRWDP Q 
Sbjct: 241  EGQDQSQDMELVETRPSGDGTFQKWAALVVPPGEEQSYTCHVQHEGLQEPLTLRWDPAQP 300

Query: 967  XXXXXXXXXXXXXXXXXXXXXXXXXXWRKKRSGEKGGSYTQAAGSDSAQGSDVSLTKDPR 1146
                                      WRKKRSGEKGGSYTQAAGSDS QGSDVSLTK PR
Sbjct: 301  PVPIVGIIVGLVLVLVAGAVVAGVVIWRKKRSGEKGGSYTQAAGSDSDQGSDVSLTKGPR 360

Query: 1147 V 1149
            V
Sbjct: 361  V 361


>ref|XP_003356639.1| PREDICTED: patr class I histocompatibility antigen, A-126 alpha
            chain-like [Sus scrofa].
          Length = 361

 Score =  560 bits (1444), Expect = e-160
 Identities = 276/361 (76%), Positives = 289/361 (80%)
 Frame = +1

Query: 67   MGPRXXXXXXXXXXXXXXXREGPHSLRYFDTAVSRPDRGKPRFISVGYVDDTQFVRFDSD 246
            MGP                + GPHSL YF TAVSRPDRG  RF  VGYVDDTQFVRFDSD
Sbjct: 1    MGPGALFLLLSGALALTGTQAGPHSLSYFYTAVSRPDRGDSRFFIVGYVDDTQFVRFDSD 60

Query: 247  APNPRMEPRAPWIEQEGQEYWDEETRNAMGSAQTFRVNLNNLRGYYNQSEAGSHTLQSMY 426
            APN +MEPRA WI+QEG EYWD ET+ +  +AQT+RV L  LRGYYNQSEAGSHTLQ MY
Sbjct: 61   APNAKMEPRAQWIKQEGPEYWDRETQISKETAQTYRVGLKTLRGYYNQSEAGSHTLQRMY 120

Query: 427  GCDVGPDWLFLRGYSQDAYDGADYIALNEDLRSWTAADTAAQITKRKWEAADEAEQMRSY 606
            GC +GPD L LRGY QDAYDGADY+ALNEDLRSWTAADTAAQITKRKWEAADEAE  RSY
Sbjct: 121  GCYLGPDGLLLRGYRQDAYDGADYLALNEDLRSWTAADTAAQITKRKWEAADEAEGERSY 180

Query: 607  LEGACVEWLQKYLQMGNNTLQRAEPPKTHVTRHPSSDLGVTLRCWALGFYPKEISLTWQR 786
            L+G CVE L+KYL+MG +TLQRAEPPKTHVTRHPSSDLGVTLRCWALGFYPKEISLTWQR
Sbjct: 181  LQGLCVESLRKYLEMGKDTLQRAEPPKTHVTRHPSSDLGVTLRCWALGFYPKEISLTWQR 240

Query: 787  EGQDQSQDMELVETRPSGDGTFQKWAALVVPPGEEQSYTCHVQHEGLQEPLTLRWDPPQX 966
            EGQDQSQDMELVETRPSGDGTFQKWAALVVPPGEEQSYTCHVQHEGLQEPLTLRWDPPQ 
Sbjct: 241  EGQDQSQDMELVETRPSGDGTFQKWAALVVPPGEEQSYTCHVQHEGLQEPLTLRWDPPQT 300

Query: 967  XXXXXXXXXXXXXXXXXXXXXXXXXXWRKKRSGEKGGSYTQAAGSDSAQGSDVSLTKDPR 1146
                                      WRKKRSGEKGGSYTQAAGSDS QGSDVSLTK PR
Sbjct: 301  PVPIVGIIVGLVLVLVAGAVVAGVVIWRKKRSGEKGGSYTQAAGSDSDQGSDVSLTKGPR 360

Query: 1147 V 1149
            V
Sbjct: 361  V 361


>ref|XP_003128290.1| PREDICTED: patr class I histocompatibility antigen, A-126 alpha
            chain-like [Sus scrofa].
          Length = 361

 Score =  560 bits (1444), Expect = e-160
 Identities = 274/361 (75%), Positives = 289/361 (80%)
 Frame = +1

Query: 67   MGPRXXXXXXXXXXXXXXXREGPHSLRYFDTAVSRPDRGKPRFISVGYVDDTQFVRFDSD 246
            MGP                + GPHSL YF TAVSRPDRG  RFI+VGYVDDTQFVRFD+ 
Sbjct: 1    MGPGALFLLLSGTLALTGTQAGPHSLSYFYTAVSRPDRGDSRFIAVGYVDDTQFVRFDNY 60

Query: 247  APNPRMEPRAPWIEQEGQEYWDEETRNAMGSAQTFRVNLNNLRGYYNQSEAGSHTLQSMY 426
            APNPRMEPR PWI+QEGQ+YWDEETR    +AQT+ V LN LRGYYNQSEAGSHTLQSM+
Sbjct: 61   APNPRMEPRVPWIQQEGQDYWDEETRKVKDNAQTYGVGLNTLRGYYNQSEAGSHTLQSMF 120

Query: 427  GCDVGPDWLFLRGYSQDAYDGADYIALNEDLRSWTAADTAAQITKRKWEAADEAEQMRSY 606
            GC +GPD L L GY QDAYDGADYIALNEDLRSWTAAD AAQI+KRKWEAAD AE  RSY
Sbjct: 121  GCYLGPDGLLLHGYRQDAYDGADYIALNEDLRSWTAADMAAQISKRKWEAADAAEHWRSY 180

Query: 607  LEGACVEWLQKYLQMGNNTLQRAEPPKTHVTRHPSSDLGVTLRCWALGFYPKEISLTWQR 786
            L+G CVE L++YL+MG +TLQRAEPPKTHVTRHPSSDLGVTLRCWALGFYPKEISLTWQR
Sbjct: 181  LQGLCVESLRRYLEMGKDTLQRAEPPKTHVTRHPSSDLGVTLRCWALGFYPKEISLTWQR 240

Query: 787  EGQDQSQDMELVETRPSGDGTFQKWAALVVPPGEEQSYTCHVQHEGLQEPLTLRWDPPQX 966
            EGQDQSQDMELVETRPSGDGTFQKWAALVVPPGEEQSYTCHVQHEGLQEPLTLRWDP Q 
Sbjct: 241  EGQDQSQDMELVETRPSGDGTFQKWAALVVPPGEEQSYTCHVQHEGLQEPLTLRWDPAQP 300

Query: 967  XXXXXXXXXXXXXXXXXXXXXXXXXXWRKKRSGEKGGSYTQAAGSDSAQGSDVSLTKDPR 1146
                                      WRK RSGEKGGSYTQAAGSDS QGSDVSLTKDPR
Sbjct: 301  PVPIVGIIVGLVLVLVAGAVVAGVVIWRKTRSGEKGGSYTQAAGSDSDQGSDVSLTKDPR 360

Query: 1147 V 1149
            V
Sbjct: 361  V 361


>ref|NP_001107528.1| MHC class I antigen 5 [Sus scrofa].
          Length = 361

 Score =  545 bits (1405), Expect = e-155
 Identities = 271/361 (75%), Positives = 284/361 (78%)
 Frame = +1

Query: 67   MGPRXXXXXXXXXXXXXXXREGPHSLRYFDTAVSRPDRGKPRFISVGYVDDTQFVRFDSD 246
            MGPR               R GPHSL Y  T+VSRP RG+PRFI+VG VDDT  VRFDSD
Sbjct: 1    MGPRGLFLLLSGALALTGTRAGPHSLSYLFTSVSRPGRGEPRFIAVGCVDDTPLVRFDSD 60

Query: 247  APNPRMEPRAPWIEQEGQEYWDEETRNAMGSAQTFRVNLNNLRGYYNQSEAGSHTLQSMY 426
            A  PR EPRA WIEQEG EYWDEETR +  +AQT R NLN LRGYYNQSEA SHT+QS++
Sbjct: 61   ARKPRKEPRAWWIEQEGPEYWDEETRISKDNAQTLRGNLNTLRGYYNQSEARSHTIQSLF 120

Query: 427  GCDVGPDWLFLRGYSQDAYDGADYIALNEDLRSWTAADTAAQITKRKWEAADEAEQMRSY 606
            GCDVGPD L LR Y QDAYDGADY+ALNEDLRSWTAADTAAQITKRKWE A+ AEQ RSY
Sbjct: 121  GCDVGPDRLLLRRYRQDAYDGADYLALNEDLRSWTAADTAAQITKRKWETANVAEQERSY 180

Query: 607  LEGACVEWLQKYLQMGNNTLQRAEPPKTHVTRHPSSDLGVTLRCWALGFYPKEISLTWQR 786
            L+G CVE LQKYL+MG +TLQRAEPPKTHVTRHPSSDLGVTLRCWALGFYPKEISLTWQR
Sbjct: 181  LQGLCVEGLQKYLEMGEDTLQRAEPPKTHVTRHPSSDLGVTLRCWALGFYPKEISLTWQR 240

Query: 787  EGQDQSQDMELVETRPSGDGTFQKWAALVVPPGEEQSYTCHVQHEGLQEPLTLRWDPPQX 966
            EGQDQSQDMELVETRPSGDGTFQKWAALVVPPGEEQSYTCHVQHEGLQEPLTLRWDP Q 
Sbjct: 241  EGQDQSQDMELVETRPSGDGTFQKWAALVVPPGEEQSYTCHVQHEGLQEPLTLRWDPAQT 300

Query: 967  XXXXXXXXXXXXXXXXXXXXXXXXXXWRKKRSGEKGGSYTQAAGSDSAQGSDVSLTKDPR 1146
                                      WR KRSGEKGGSYTQAAGSDSAQGSDV L  DPR
Sbjct: 301  PVPMVGIIVGLVLVLVAGAMVAGVVIWRLKRSGEKGGSYTQAAGSDSAQGSDVFLPMDPR 360

Query: 1147 V 1149
            V
Sbjct: 361  V 361


>ref|NP_998933.1| MHC class I antigen 7 [Sus scrofa].
          Length = 401

 Score =  449 bits (1155), Expect = e-126
 Identities = 225/331 (67%), Positives = 244/331 (73%)
 Frame = +1

Query: 133  PHSLRYFDTAVSRPDRGKPRFISVGYVDDTQFVRFDSDAPNPRMEPRAPWIEQEGQEYWD 312
            PHSLRYF TAVSRP R  PRF  VGYVDDTQFVRFDS+APNPR EPR PW+E EG E  D
Sbjct: 23   PHSLRYFYTAVSRPSRRDPRFSVVGYVDDTQFVRFDSNAPNPREEPRTPWVELEGPECCD 82

Query: 313  EETRNAMGSAQTFRVNLNNLRGYYNQSEAGSHTLQSMYGCDVGPDWLFLRGYSQDAYDGA 492
              TR    ++Q F+V+LN LRGYYNQSEAGSHT Q + GC V  D   LRGYSQ AYDGA
Sbjct: 83   RNTRIYKDTSQNFQVSLNVLRGYYNQSEAGSHTYQWLCGCYVARDGRLLRGYSQFAYDGA 142

Query: 493  DYIALNEDLRSWTAADTAAQITKRKWEAADEAEQMRSYLEGACVEWLQKYLQMGNNTLQR 672
            DYI LNEDLRSWTA   AAQIT+RKWE    AEQ R+YLE ACV+ L +YL  G  TLQR
Sbjct: 143  DYIVLNEDLRSWTAVGMAAQITRRKWEEETVAEQSRAYLEVACVQSLHRYLANGKETLQR 202

Query: 673  AEPPKTHVTRHPSSDLGVTLRCWALGFYPKEISLTWQREGQDQSQDMELVETRPSGDGTF 852
            ++PPKTHVTRHPSSD  VTLRCWALGFYPKEISLTWQ+EGQDQSQD+E+VETRPSGDGTF
Sbjct: 203  SDPPKTHVTRHPSSDNKVTLRCWALGFYPKEISLTWQQEGQDQSQDVEVVETRPSGDGTF 262

Query: 853  QKWAALVVPPGEEQSYTCHVQHEGLQEPLTLRWDPPQXXXXXXXXXXXXXXXXXXXXXXX 1032
            +KWAALVVPPGEEQSYTCHVQHEGLQEPLTLRWDPPQ                       
Sbjct: 263  RKWAALVVPPGEEQSYTCHVQHEGLQEPLTLRWDPPQPPVPIVGIIVGLVLVLVTGAVVT 322

Query: 1033 XXXXWRKKRSGEKGGSYTQAAGSDSAQGSDV 1125
                WRKK SG K   Y QA  S  ++ S V
Sbjct: 323  GVVIWRKKCSGGKVRKYQQAERSSRSENSGV 353


>ref|NP_001107175.1| MHC class I antigen 8 [Sus scrofa].
          Length = 355

 Score =  449 bits (1154), Expect = e-126
 Identities = 216/333 (64%), Positives = 249/333 (74%)
 Frame = +1

Query: 130  GPHSLRYFDTAVSRPDRGKPRFISVGYVDDTQFVRFDSDAPNPRMEPRAPWIEQEGQEYW 309
            G HS+RYF T VSRP  G+PR++ VGYVDDTQFVRFDS+A NPRMEPRAPW+EQEGQEYW
Sbjct: 20   GSHSMRYFHTVVSRPGYGEPRYLEVGYVDDTQFVRFDSEAQNPRMEPRAPWVEQEGQEYW 79

Query: 310  DEETRNAMGSAQTFRVNLNNLRGYYNQSEAGSHTLQSMYGCDVGPDWLFLRGYSQDAYDG 489
            DEET+      Q FR NL  LRGYYNQSE GSHT Q  YGC+ G     L  + Q AYDG
Sbjct: 80   DEETQRVKDLVQNFRRNLMILRGYYNQSETGSHTFQLTYGCEEGSHGRPLHVHWQYAYDG 139

Query: 490  ADYIALNEDLRSWTAADTAAQITKRKWEAADEAEQMRSYLEGACVEWLQKYLQMGNNTLQ 669
             DYI LNEDL SWTAAD AA++T+RKW+ +   E+ +SYLEG CVEWL++YL+ G   LQ
Sbjct: 140  EDYITLNEDLSSWTAADMAARVTQRKWDKSRAHERFKSYLEGTCVEWLRRYLENGREMLQ 199

Query: 670  RAEPPKTHVTRHPSSDLGVTLRCWALGFYPKEISLTWQREGQDQSQDMELVETRPSGDGT 849
            RA+PPK +VT HPSSD  VTLRCWALGFYPKEISLTW+REGQDQSQD+E+VETRPSGDGT
Sbjct: 200  RADPPKAYVTCHPSSDNKVTLRCWALGFYPKEISLTWRREGQDQSQDVEVVETRPSGDGT 259

Query: 850  FQKWAALVVPPGEEQSYTCHVQHEGLQEPLTLRWDPPQXXXXXXXXXXXXXXXXXXXXXX 1029
            FQKWAALVVPPGEEQSYTCHV+HEGLQEPLTLRW+P +                      
Sbjct: 260  FQKWAALVVPPGEEQSYTCHVKHEGLQEPLTLRWEPSR----LSAITIVGIVAGLVLLGA 315

Query: 1030 XXXXXWRKKRSGEKGGSYTQAAGSDSAQGSDVS 1128
                 W+K+ SG K GSY+QA  ++S + SDVS
Sbjct: 316  VITVIWKKRFSGRKRGSYSQAPSNNSVENSDVS 348


>ref|NP_001107176.1| MHC class I antigen 6 [Sus scrofa].
          Length = 369

 Score =  408 bits (1049), Expect = e-114
 Identities = 201/322 (62%), Positives = 229/322 (71%)
 Frame = +1

Query: 130  GPHSLRYFDTAVSRPDRGKPRFISVGYVDDTQFVRFDSDAPNPRMEPRAPWIEQEGQEYW 309
            G HSLRY    VSRP  G   + SVG++DDTQFVRF SDA NPR+EPRAPW+EQEG+EYW
Sbjct: 50   GSHSLRYLHILVSRPGHGSDLYSSVGFLDDTQFVRFSSDAANPRVEPRAPWMEQEGREYW 109

Query: 310  DEETRNAMGSAQTFRVNLNNLRGYYNQSEAGSHTLQSMYGCDVGPDWLFLRGYSQDAYDG 489
            D +T  A   ++  R NL  + G +N S++ SH+   + GCDVG +   LRGY Q +YDG
Sbjct: 110  DRQTDIAKEHSKASRSNLRVIIGNHNHSQSESHSFLWVSGCDVGSEGRILRGYEQFSYDG 169

Query: 490  ADYIALNEDLRSWTAADTAAQITKRKWEAADEAEQMRSYLEGACVEWLQKYLQMGNNTLQ 669
             DYI LNEDLRSWTA  T AQI +RKWEA   AEQ R+YLE  CVEWL+KYL+ G + LQ
Sbjct: 170  DDYIVLNEDLRSWTAISTVAQIIRRKWEAEGVAEQYRAYLEIECVEWLRKYLEKGKDVLQ 229

Query: 670  RAEPPKTHVTRHPSSDLGVTLRCWALGFYPKEISLTWQREGQDQSQDMELVETRPSGDGT 849
            RA PPKTHVTRHP  D  VTLRCWALGFYPKEISLTWQR+G+DQ+QDMELVETRPSGDGT
Sbjct: 230  RAVPPKTHVTRHPFYDNKVTLRCWALGFYPKEISLTWQRDGEDQTQDMELVETRPSGDGT 289

Query: 850  FQKWAALVVPPGEEQSYTCHVQHEGLQEPLTLRWDPPQXXXXXXXXXXXXXXXXXXXXXX 1029
            FQKWAALVVP GEEQSYTC VQHEGLQEPLTLRW+PP                       
Sbjct: 290  FQKWAALVVPSGEEQSYTCQVQHEGLQEPLTLRWEPP---PLSLNLIMICIAVSVLVVTV 346

Query: 1030 XXXXXWRKKRSGEKGGSYTQAA 1095
                 WRK+ SG   G+Y QAA
Sbjct: 347  LGTVIWRKRNSGGNRGNYVQAA 368


>ref|XP_003361021.1| PREDICTED: class I histocompatibility antigen, Gogo-C*0101/C*0102
           alpha chain-like [Sus scrofa].
          Length = 374

 Score =  258 bits (658), Expect = 1e-68
 Identities = 127/278 (45%), Positives = 176/278 (63%), Gaps = 1/278 (0%)
 Frame = +1

Query: 130 GPHSLRYFDTAVSRPDRGKPRFISVGYVDDTQFVRFDSDAPNPRMEPRAPWIEQEGQEYW 309
           G HSLRY   A+S P  G P+F++VGYVDD  F+R+DS     + EP+APW+     +YW
Sbjct: 40  GTHSLRYHYLALSEPGPGLPQFLAVGYVDDQVFIRYDSR--RGKAEPQAPWMAHMDAQYW 97

Query: 310 DEETRNAMGSAQTFRVNLNNLRGYYNQSEAGSHTLQSMYGCDVGPDWLFLRGYSQDAYDG 489
           ++ET+     A+  +V +  + GYYNQS +G H+ Q M+GC++  D     G+ Q  +DG
Sbjct: 98  EKETKKQRIWAKVQQVEMWTVMGYYNQS-SGMHSTQRMFGCEIQEDG-HSTGFWQFGFDG 155

Query: 490 ADYIALNEDLRSWTAADTAAQITKRKWEAAD-EAEQMRSYLEGACVEWLQKYLQMGNNTL 666
            D+++L+ +  SW +A+  A  TKR WE     AE  ++Y+EG C+  L+KYL++G    
Sbjct: 156 QDHLSLDLETLSWVSAEPVAVRTKRWWETERCYAEYDKAYVEGVCLTSLRKYLELGGQRF 215

Query: 667 QRAEPPKTHVTRHPSSDLGVTLRCWALGFYPKEISLTWQREGQDQSQDMELVETRPSGDG 846
            R EPP   VT+H + D G TLRCWALGFYP++ISL+W    ++ +   E VETRPSGDG
Sbjct: 216 SRREPPTVRVTKHTAQDGGTTLRCWALGFYPQDISLSWWLGEKELTSKTEYVETRPSGDG 275

Query: 847 TFQKWAALVVPPGEEQSYTCHVQHEGLQEPLTLRWDPP 960
           T+Q W A  VP GEE  YTCHVQH  L   LT+ W+ P
Sbjct: 276 TYQTWLATQVPAGEEIQYTCHVQHSSLNHTLTVTWESP 313


  Database: RefSeq49_SP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 11,343,932
  Number of sequences in database:  24,897
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 48,970,432
Number of extensions: 1528250
Number of successful extensions: 9274
Number of sequences better than 1.0e-05: 36
Number of HSP's gapped: 9136
Number of HSP's successfully gapped: 37
Length of query: 639
Length of database: 11,343,932
Length adjustment: 105
Effective length of query: 534
Effective length of database: 8,729,747
Effective search space: 4661684898
Effective search space used: 4661684898
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

Search to Sscrofa10_2

BLASTN 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-000642
         (1919 letters)

Database: Sscrofa_10.2.fasta 
           4582 sequences; 2,808,509,378 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Sscrofa_Chr07                                                        1207   0.0  
gb|GL896105.1| Sus scrofa unplaced genomic scaffold chrU_scaffol...   573   e-160
Sscrofa_Chr14                                                         444   e-122
Sscrofa_Chr13                                                         438   e-120
Sscrofa_Chr04                                                         438   e-120
Sscrofa_ChrX                                                          430   e-117
Sscrofa_Chr03                                                         416   e-113
Sscrofa_Chr11                                                         404   e-110
Sscrofa_Chr01                                                         404   e-110
Sscrofa_Chr09                                                         398   e-108

>Sscrofa_Chr07 
||          Length = 134764511

 Score = 1207 bits (609), Expect = 0.0
 Identities = 609/609 (100%)
 Strand = Plus / Minus

                                                                            
Query: 1146     agtgtgagacagctgccttgtggggactaagggacacaagatttgttcacgtcccacttt 1205
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24642186 agtgtgagacagctgccttgtggggactaagggacacaagatttgttcacgtcccacttt 24642127

                                                                            
Query: 1206     gtgacttcagaccccctgactcctatttctgcagctgcctctgaaagggtctgtgttcct 1265
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24642126 gtgacttcagaccccctgactcctatttctgcagctgcctctgaaagggtctgtgttcct 24642067

                                                                            
Query: 1266     atgagcatcctgagaggaggtggggaccctggcccagccctgccccccatgtcccctctt 1325
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24642066 atgagcatcctgagaggaggtggggaccctggcccagccctgccccccatgtcccctctt 24642007

                                                                            
Query: 1326     caccctgacctgtgttctctttcctgatccactttccagctccaacaggttggggggagg 1385
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24642006 caccctgacctgtgttctctttcctgatccactttccagctccaacaggttggggggagg 24641947

                                                                            
Query: 1386     caggcggcaatggaccatctccatccttatgctaagttcattgccctgactggtgactgc 1445
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24641946 caggcggcaatggaccatctccatccttatgctaagttcattgccctgactggtgactgc 24641887

                                                                            
Query: 1446     ggggagccgaggaaacacaggaggccaaggaagggaactagcctgacggcacagttccaa 1505
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24641886 ggggagccgaggaaacacaggaggccaaggaagggaactagcctgacggcacagttccaa 24641827

                                                                            
Query: 1506     aggcagggttcctaaccaagggaaaagagcctacccaccggcgcagttccaagggtaggt 1565
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24641826 aggcagggttcctaaccaagggaaaagagcctacccaccggcgcagttccaagggtaggt 24641767

                                                                            
Query: 1566     ttagaaatagggaaaggggcttacccagtggcacagttccaagggcaagttataaaaata 1625
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24641766 ttagaaatagggaaaggggcttacccagtggcacagttccaagggcaagttataaaaata 24641707

                                                                            
Query: 1626     atgaggctcacctgctaacccgactacaacggcaacaataacaaaacgaaggttttgcac 1685
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24641706 atgaggctcacctgctaacccgactacaacggcaacaataacaaaacgaaggttttgcac 24641647

                                                                            
Query: 1686     aatagtgcaagaataaaaattgcttcttggaaaattcagtctttcctgttgtttacttat 1745
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24641646 aatagtgcaagaataaaaattgcttcttggaaaattcagtctttcctgttgtttacttat 24641587

                         
Query: 1746     tactcagcc 1754
                |||||||||
Sbjct: 24641586 tactcagcc 24641578



 Score =  553 bits (279), Expect = e-154
 Identities = 279/279 (100%)
 Strand = Plus / Minus

                                                                            
Query: 674      cagagcctccaaagacacatgtgacccgccaccccagctctgacctgggggtcaccctga 733
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24643497 cagagcctccaaagacacatgtgacccgccaccccagctctgacctgggggtcaccctga 24643438

                                                                            
Query: 734      ggtgctgggccctgggcttctaccctaaggagatctccctgacctggcagcgcgagggcc 793
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24643437 ggtgctgggccctgggcttctaccctaaggagatctccctgacctggcagcgcgagggcc 24643378

                                                                            
Query: 794      aggaccagagccaagacatggagctggtggagaccaggccctcaggggatgggaccttcc 853
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24643377 aggaccagagccaagacatggagctggtggagaccaggccctcaggggatgggaccttcc 24643318

                                                                            
Query: 854      agaagtgggcggccctggtggtgcctcctggagaggagcagagctacacctgccatgtgc 913
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24643317 agaagtgggcggccctggtggtgcctcctggagaggagcagagctacacctgccatgtgc 24643258

                                                       
Query: 914      agcacgagggcctgcaggagcccctcaccctgagatggg 952
                |||||||||||||||||||||||||||||||||||||||
Sbjct: 24643257 agcacgagggcctgcaggagcccctcaccctgagatggg 24643219



 Score =  521 bits (263), Expect = e-145
 Identities = 270/271 (99%), Gaps = 1/271 (0%)
 Strand = Plus / Minus

                                                                            
Query: 131      gtccccactccctgaggtatttcgacaccgccgtgtcccggcccgaccgcgggaagcccc 190
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24644858 gtccccactccctgaggtatttcgacaccgccgtgtcccggcccgaccgcgggaagcccc 24644799

                                                                            
Query: 191      gtttcatctccgtcggctacgtggacgacacgcagttcgtgcggttcgacagcgacgccc 250
                ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24644798 gtt-catctccgtcggctacgtggacgacacgcagttcgtgcggttcgacagcgacgccc 24644740

                                                                            
Query: 251      cgaatccgcggatggagccgcgggcgccgtggatagagcaggaggggcaggagtattggg 310
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24644739 cgaatccgcggatggagccgcgggcgccgtggatagagcaggaggggcaggagtattggg 24644680

                                                                            
Query: 311      atgaggagacgcggaacgccatgggcagcgcacagactttccgagtgaacctgaacaacc 370
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24644679 atgaggagacgcggaacgccatgggcagcgcacagactttccgagtgaacctgaacaacc 24644620

                                               
Query: 371      tgcgcggctactacaaccagagcgaggccgg 401
                |||||||||||||||||||||||||||||||
Sbjct: 24644619 tgcgcggctactacaaccagagcgaggccgg 24644589



 Score =  521 bits (263), Expect = e-145
 Identities = 275/279 (98%)
 Strand = Plus / Minus

                                                                            
Query: 674      cagagcctccaaagacacatgtgacccgccaccccagctctgacctgggggtcaccctga 733
                |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||
Sbjct: 24685333 cagagcctccaaagacacatgtgacccgccaccccagctctgacctcggggtcaccttga 24685274

                                                                            
Query: 734      ggtgctgggccctgggcttctaccctaaggagatctccctgacctggcagcgcgagggcc 793
                |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 24685273 ggtgctgggccctgggcttctaccctaaggagatctccctgacctggcagcgggagggcc 24685214

                                                                            
Query: 794      aggaccagagccaagacatggagctggtggagaccaggccctcaggggatgggaccttcc 853
                ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24685213 aggaccagagccaggacatggagctggtggagaccaggccctcaggggatgggaccttcc 24685154

                                                                            
Query: 854      agaagtgggcggccctggtggtgcctcctggagaggagcagagctacacctgccatgtgc 913
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24685153 agaagtgggcggccctggtggtgcctcctggagaggagcagagctacacctgccatgtgc 24685094

                                                       
Query: 914      agcacgagggcctgcaggagcccctcaccctgagatggg 952
                |||||||||||||||||||||||||||||||||||||||
Sbjct: 24685093 agcacgagggcctgcaggagcccctcaccctgagatggg 24685055



 Score =  513 bits (259), Expect = e-142
 Identities = 274/279 (98%)
 Strand = Plus / Minus

                                                                            
Query: 674      cagagcctccaaagacacatgtgacccgccaccccagctctgacctgggggtcaccctga 733
                ||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||
Sbjct: 24722401 cagagcctccaaagacacatgtgacccactaccccagctctgacctgggggtcaccctga 24722342

                                                                            
Query: 734      ggtgctgggccctgggcttctaccctaaggagatctccctgacctggcagcgcgagggcc 793
                |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 24722341 ggtgctgggccctgggcttctaccctaaggagatctccctgacctggcagcgggagggcc 24722282

                                                                            
Query: 794      aggaccagagccaagacatggagctggtggagaccaggccctcaggggatgggaccttcc 853
                | ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24722281 aagaccagagccaggacatggagctggtggagaccaggccctcaggggatgggaccttcc 24722222

                                                                            
Query: 854      agaagtgggcggccctggtggtgcctcctggagaggagcagagctacacctgccatgtgc 913
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24722221 agaagtgggcggccctggtggtgcctcctggagaggagcagagctacacctgccatgtgc 24722162

                                                       
Query: 914      agcacgagggcctgcaggagcccctcaccctgagatggg 952
                |||||||||||||||||||||||||||||||||||||||
Sbjct: 24722161 agcacgagggcctgcaggagcccctcaccctgagatggg 24722123



 Score =  513 bits (259), Expect = e-142
 Identities = 274/279 (98%)
 Strand = Plus / Minus

                                                                            
Query: 674      cagagcctccaaagacacatgtgacccgccaccccagctctgacctgggggtcaccctga 733
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 24749848 cagagcctccaaagacacatgtgacccgccaccccagctctgacctgggggtcaccttga 24749789

                                                                            
Query: 734      ggtgctgggccctgggcttctaccctaaggagatctccctgacctggcagcgcgagggcc 793
                |||||||||| ||||||||| ||||||||||||||||||||||||||||||| |||||||
Sbjct: 24749788 ggtgctgggctctgggcttccaccctaaggagatctccctgacctggcagcgggagggcc 24749729

                                                                            
Query: 794      aggaccagagccaagacatggagctggtggagaccaggccctcaggggatgggaccttcc 853
                ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24749728 aggaccagagccaggacatggagctggtggagaccaggccctcaggggatgggaccttcc 24749669

                                                                            
Query: 854      agaagtgggcggccctggtggtgcctcctggagaggagcagagctacacctgccatgtgc 913
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24749668 agaagtgggcggccctggtggtgcctcctggagaggagcagagctacacctgccatgtgc 24749609

                                                       
Query: 914      agcacgagggcctgcaggagcccctcaccctgagatggg 952
                |||||||||||||||||||||||||||||||||||||||
Sbjct: 24749608 agcacgagggcctgcaggagcccctcaccctgagatggg 24749570



 Score =  513 bits (259), Expect = e-142
 Identities = 274/279 (98%)
 Strand = Plus / Minus

                                                                            
Query: 674      cagagcctccaaagacacatgtgacccgccaccccagctctgacctgggggtcaccctga 733
                |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||
Sbjct: 26675878 cagaccctccaaagacacatgtgacccgccaccccagctctgacctcggggtcaccttga 26675819

                                                                            
Query: 734      ggtgctgggccctgggcttctaccctaaggagatctccctgacctggcagcgcgagggcc 793
                |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 26675818 ggtgctgggccctgggcttctaccctaaggagatctccctgaactggcagcgcgagggcc 26675759

                                                                            
Query: 794      aggaccagagccaagacatggagctggtggagaccaggccctcaggggatgggaccttcc 853
                ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26675758 aggaccagagccaggacatggagctggtggagaccaggccctcaggggatgggaccttcc 26675699

                                                                            
Query: 854      agaagtgggcggccctggtggtgcctcctggagaggagcagagctacacctgccatgtgc 913
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26675698 agaagtgggcggccctggtggtgcctcctggagaggagcagagctacacctgccatgtgc 26675639

                                                       
Query: 914      agcacgagggcctgcaggagcccctcaccctgagatggg 952
                |||||||||||||||||||||||||||||||||||||||
Sbjct: 26675638 agcacgagggcctgcaggagcccctcaccctgagatggg 26675600



 Score =  505 bits (255), Expect = e-140
 Identities = 273/279 (97%)
 Strand = Plus / Minus

                                                                            
Query: 674      cagagcctccaaagacacatgtgacccgccaccccagctctgacctgggggtcaccctga 733
                |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||
Sbjct: 24706186 cagaccctccaaagacacatgtgacccgccaccccagctctgacctcggggtcaccttga 24706127

                                                                            
Query: 734      ggtgctgggccctgggcttctaccctaaggagatctccctgacctggcagcgcgagggcc 793
                |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 24706126 ggtgctgggccctgggcttctaccctaaggagatctccctgacctggcagcgggagggcc 24706067

                                                                            
Query: 794      aggaccagagccaagacatggagctggtggagaccaggccctcaggggatgggaccttcc 853
                ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24706066 aggaccagagccaggacttggagctggtggagaccaggccctcaggggatgggaccttcc 24706007

                                                                            
Query: 854      agaagtgggcggccctggtggtgcctcctggagaggagcagagctacacctgccatgtgc 913
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24706006 agaagtgggcggccctggtggtgcctcctggagaggagcagagctacacctgccatgtgc 24705947

                                                       
Query: 914      agcacgagggcctgcaggagcccctcaccctgagatggg 952
                |||||||||||||||||||||||||||||||||||||||
Sbjct: 24705946 agcacgagggcctgcaggagcccctcaccctgagatggg 24705908



 Score =  498 bits (251), Expect = e-138
 Identities = 273/279 (97%), Gaps = 1/279 (0%)
 Strand = Plus / Minus

                                                                            
Query: 674      cagagcctccaaagacacatgtgacccgccaccccagctctgacctgggggtcaccctga 733
                ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||
Sbjct: 24657273 cagagcctccaaagacacatgtgacccgccaccccagctctgacctgagggtcaccttga 24657214

                                                                            
Query: 734      ggtgctgggccctgggcttctaccctaaggagatctccctgacctggcagcgcgagggcc 793
                |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct: 24657213 ggtgctgggccctgggcttctaccctaaggagatctccctgacctggcagcgggaggggc 24657154

                                                                            
Query: 794      aggaccagagccaagacatggagctggtggagaccaggccctcaggggatgggaccttcc 853
                ||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 24657153 aggaccagagccaggacatggagctggtggagaccaggccctca-gggatgggaccttcc 24657095

                                                                            
Query: 854      agaagtgggcggccctggtggtgcctcctggagaggagcagagctacacctgccatgtgc 913
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24657094 agaagtgggcggccctggtggtgcctcctggagaggagcagagctacacctgccatgtgc 24657035

                                                       
Query: 914      agcacgagggcctgcaggagcccctcaccctgagatggg 952
                |||||||||||||||||||||||||||||||||||||||
Sbjct: 24657034 agcacgagggcctgcaggagcccctcaccctgagatggg 24656996



 Score =  462 bits (233), Expect = e-127
 Identities = 266/277 (96%)
 Strand = Plus / Minus

                                                                            
Query: 400      gggtctcacaccctccagagcatgtacggctgcgacgtggggccagactggctcttcctc 459
                |||||||||||| ||||||||||||||||||||||||||||||||||| ||||| |||||
Sbjct: 24644365 gggtctcacaccttccagagcatgtacggctgcgacgtggggccagacgggctcctcctc 24644306

                                                                            
Query: 460      cgcgggtacagtcaggacgcctacgacggcgccgattacatcgccctgaacgaggacctg 519
                |||||||||||||||   | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 24644305 cgcgggtacagtcagtttggctacgacggcgccgattacatcgccctgaacgaggacctg 24644246

                                                                            
Query: 520      cgctcctggaccgcggcggacacggcggctcagatcaccaagcgcaagtgggaggcggcc 579
                |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 24644245 cgctcctggaccgcggcggacacggcggctcagatcaccaagcgcaagagggaggcggcc 24644186

                                                                            
Query: 580      gatgaggcggagcaaatgagaagctacctggagggcgcgtgtgtggagtggctccagaaa 639
                |||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 24644185 gatgcggcggagcaaatgagaagctacctggagggcgcgtgtgtggtgtggctccagaaa 24644126

                                                     
Query: 640      tacctgcagatggggaataacacgctgcagcgcgcag 676
                |||||| ||||||||||||||||||||||||||||||
Sbjct: 24644125 tacctggagatggggaataacacgctgcagcgcgcag 24644089



 Score =  426 bits (215), Expect = e-116
 Identities = 263/279 (94%)
 Strand = Plus / Plus

                                                                            
Query: 674      cagagcctccaaagacacatgtgacccgccaccccagctctgacctgggggtcaccctga 733
                |||| |||||||||||||||||||||||||||||||||||||||      |||||| |||
Sbjct: 27616062 cagatcctccaaagacacatgtgacccgccaccccagctctgacaataaagtcaccttga 27616121

                                                                            
Query: 734      ggtgctgggccctgggcttctaccctaaggagatctccctgacctggcagcgcgagggcc 793
                |||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| |
Sbjct: 27616122 ggtgctgggccctgggcttctaccctaaggagatctccctgacctggcagcaggaggggc 27616181

                                                                            
Query: 794      aggaccagagccaagacatggagctggtggagaccaggccctcaggggatgggaccttcc 853
                ||||||||||||| ||| ||||| | ||||| ||||||||||||||||||||||||||||
Sbjct: 27616182 aggaccagagccaggacgtggaggttgtggaaaccaggccctcaggggatgggaccttcc 27616241

                                                                            
Query: 854      agaagtgggcggccctggtggtgcctcctggagaggagcagagctacacctgccatgtgc 913
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27616242 agaagtgggcggccctggtggtgcctcctggagaggagcagagctacacctgccatgtgc 27616301

                                                       
Query: 914      agcacgagggcctgcaggagcccctcaccctgagatggg 952
                |||||||||||||||||||||||||||||||||||||||
Sbjct: 27616302 agcacgagggcctgcaggagcccctcaccctgagatggg 27616340



 Score =  420 bits (212), Expect = e-114
 Identities = 287/312 (91%)
 Strand = Plus / Plus

                                                                            
Query: 1443     tgcggggagccgaggaaacacaggaggccaaggaagggaactagcctgacggcacagttc 1502
                |||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 12277709 tgcggggagccgaggagatacaggaggccaaggaagggaactagcctgacggcacagttc 12277768

                                                                            
Query: 1503     caaaggcagggttcctaaccaagggaaaagagcctacccaccggcgcagttccaagggta 1562
                | |||||||||||||||||| ||| |||| |||| |||| ||||| |||||||||||| |
Sbjct: 12277769 cgaaggcagggttcctaaccgaggaaaaaaagcccacccgccggcacagttccaagggca 12277828

                                                                            
Query: 1563     ggtttagaaatagggaaaggggcttacccagtggcacagttccaagggcaagttataaaa 1622
                |||||||||| || |||| |||||||||| ||||||||||||  |||||||||| |||||
Sbjct: 12277829 ggtttagaaacagagaaaagggcttacccggtggcacagttctgagggcaagttctaaaa 12277888

                                                                            
Query: 1623     ataatgaggctcacctgctaacccgactacaacggcaacaataacaaaacgaaggttttg 1682
                ||||||||||||||||||||| ||||| ||||  ||||||||||||||| ||||| ||||
Sbjct: 12277889 ataatgaggctcacctgctaatccgacaacaatagcaacaataacaaaatgaaggctttg 12277948

                                                                            
Query: 1683     cacaatagtgcaagaataaaaattgcttcttggaaaattcagtctttcctgttgtttact 1742
                |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 12277949 cacactagtgcaagaataaaaattgcttcttggaaaattcagtctttcctgttatttact 12278008

                            
Query: 1743     tattactcagcc 1754
                ||||||||||||
Sbjct: 12278009 tattactcagcc 12278020



 Score =  412 bits (208), Expect = e-112
 Identities = 256/272 (94%)
 Strand = Plus / Minus

                                                                            
Query: 130      ggtccccactccctgaggtatttcgacaccgccgtgtcccggcccgaccgcgggaagccc 189
                ||||||||||||||||| ||||||  |||||||||||||||||||||||||||| |||||
Sbjct: 24627128 ggtccccactccctgagctatttctccaccgccgtgtcccggcccgaccgcggggagccc 24627069

                                                                            
Query: 190      cgtttcatctccgtcggctacgtggacgacacgcagttcgtgcggttcgacagcgacgcc 249
                || |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24627068 cgcttcatcgccgtcggctacgtggacgacacgcagttcgtgcggttcgacagcgacgcc 24627009

                                                                            
Query: 250      ccgaatccgcggatggagccgcgggcgccgtggatagagcaggaggggcaggagtattgg 309
                || ||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||
Sbjct: 24627008 cccaatccgcggatggagccgcgggcgccgtggatacagcaggaggggcaggactattgg 24626949

                                                                            
Query: 310      gatgaggagacgcggaacgccatgggcagcgcacagactttccgagtgaacctgaacaac 369
                |||  |||||||||||||| |||||||||||||||||||  ||||||||||||||| | |
Sbjct: 24626948 gatcgggagacgcggaacgtcatgggcagcgcacagactgaccgagtgaacctgaagacc 24626889

                                                
Query: 370      ctgcgcggctactacaaccagagcgaggccgg 401
                ||||||||||||||||||||||||||||||||
Sbjct: 24626888 ctgcgcggctactacaaccagagcgaggccgg 24626857



 Score =  412 bits (208), Expect = e-112
 Identities = 256/272 (94%)
 Strand = Plus / Minus

                                                                            
Query: 130      ggtccccactccctgaggtatttcgacaccgccgtgtcccggcccgaccgcgggaagccc 189
                ||||||||||||||||| ||||||  |||||||||||||||||||||||||||| |  ||
Sbjct: 24751227 ggtccccactccctgagctatttcttcaccgccgtgtcccggcccgaccgcggggactcc 24751168

                                                                            
Query: 190      cgtttcatctccgtcggctacgtggacgacacgcagttcgtgcggttcgacagcgacgcc 249
                || |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24751167 cgcttcatcgccgtcggctacgtggacgacacgcagttcgtgcggttcgacagcgacgcc 24751108

                                                                            
Query: 250      ccgaatccgcggatggagccgcgggcgccgtggatagagcaggaggggcaggagtattgg 309
                |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 24751107 ccgaatccgcggatggagccgcgggcgccgtggatacagcaggaggggcaggagtattgg 24751048

                                                                            
Query: 310      gatgaggagacgcggaacgccatgggcagcgcacagactttccgagtgaacctgaacaac 369
                ||||||||||||||||||||||||| || |||||||| |  ||||||||||||||| | |
Sbjct: 24751047 gatgaggagacgcggaacgccatggacaacgcacagattaaccgagtgaacctgaagacc 24750988

                                                
Query: 370      ctgcgcggctactacaaccagagcgaggccgg 401
                ||||||||||||||||||||||||||||||||
Sbjct: 24750987 ctgcgcggctactacaaccagagcgaggccgg 24750956



 Score =  387 bits (195), Expect = e-104
 Identities = 252/271 (92%)
 Strand = Plus / Minus

                                                                            
Query: 682      ccaaagacacatgtgacccgccaccccagctctgacctgggggtcaccctgaggtgctgg 741
                |||||| || |||||||| |||||||||||||||||      ||||||||||||||||||
Sbjct: 27628600 ccaaaggcatatgtgacctgccaccccagctctgacaataaagtcaccctgaggtgctgg 27628541

                                                                            
Query: 742      gccctgggcttctaccctaaggagatctccctgacctggcagcgcgagggccaggaccag 801
                |||||||||||||||||||||||||||||||||||||||| ||| ||||| |||||||||
Sbjct: 27628540 gccctgggcttctaccctaaggagatctccctgacctggcggcgggaggggcaggaccag 27628481

                                                                            
Query: 802      agccaagacatggagctggtggagaccaggccctcaggggatgggaccttccagaagtgg 861
                ||||| ||| ||||| | ||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 27628480 agccaggacgtggaggttgtggaaaccaggccctcaggggatgggaccttccagaagtgg 27628421

                                                                            
Query: 862      gcggccctggtggtgcctcctggagaggagcagagctacacctgccatgtgcagcacgag 921
                ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 27628420 gcggccctggtggtgcctcctggagaggagcagagctacacctgccatgtgaagcacgag 27628361

                                               
Query: 922      ggcctgcaggagcccctcaccctgagatggg 952
                |||||||||||||| ||||||||||||||||
Sbjct: 27628360 ggcctgcaggagccactcaccctgagatggg 27628330



 Score =  369 bits (186), Expect = 4e-99
 Identities = 252/274 (91%)
 Strand = Plus / Plus

                                                                            
Query: 679      cctccaaagacacatgtgacccgccaccccagctctgacctgggggtcaccctgaggtgc 738
                ||||||||||| ||||||||||||||||||  || ||||      ||||| || || |||
Sbjct: 27604571 cctccaaagactcatgtgacccgccaccccttctatgacaataaagtcactctaagatgc 27604630

                                                                            
Query: 739      tgggccctgggcttctaccctaaggagatctccctgacctggcagcgcgagggccaggac 798
                ||||||||||||||||||||||||||||||||||||||||||||||  ||||| ||||||
Sbjct: 27604631 tgggccctgggcttctaccctaaggagatctccctgacctggcagcaggaggggcaggac 27604690

                                                                            
Query: 799      cagagccaagacatggagctggtggagaccaggccctcaggggatgggaccttccagaag 858
                |||| ||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||
Sbjct: 27604691 cagacccaggacatggagctcgtggagaccaggccttcaggggatgggaccttccagaag 27604750

                                                                            
Query: 859      tgggcggccctggtggtgcctcctggagaggagcagagctacacctgccatgtgcagcac 918
                ||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||
Sbjct: 27604751 tgggcggccctggtggtgccttctggagaggagcagagctacacctgccaggtgcagcac 27604810

                                                  
Query: 919      gagggcctgcaggagcccctcaccctgagatggg 952
                ||||||||||||||||||||||||||||||||||
Sbjct: 27604811 gagggcctgcaggagcccctcaccctgagatggg 27604844



 Score =  355 bits (179), Expect = 6e-95
 Identities = 209/219 (95%)
 Strand = Plus / Minus

                                                                            
Query: 1146     agtgtgagacagctgccttgtggggactaagggacacaagatttgttcacgtcccacttt 1205
                ||||||||||| |||||||||||||||| ||||||||||||||||||||| |||||||||
Sbjct: 24748521 agtgtgagacaactgccttgtggggactgagggacacaagatttgttcacatcccacttt 24748462

                                                                            
Query: 1206     gtgacttcagaccccctgactcctatttctgcagctgcctctgaaagggtctgtgttcct 1265
                ||||||||||| |||||||||||| ||||||||||||| |||||||||||||||||||||
Sbjct: 24748461 gtgacttcagatcccctgactcctgtttctgcagctgcatctgaaagggtctgtgttcct 24748402

                                                                            
Query: 1266     atgagcatcctgagaggaggtggggaccctggcccagccctgccccccatgtcccctctt 1325
                ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct: 24748401 atgagcatcctgagaggaggtggggaccctggcccagccctgccccccacgtcccctcct 24748342

                                                       
Query: 1326     caccctgacctgtgttctctttcctgatccactttccag 1364
                ||||||||||||||||||||| |||||||| ||||||||
Sbjct: 24748341 caccctgacctgtgttctcttccctgatcctctttccag 24748303



 Score =  349 bits (176), Expect = 4e-93
 Identities = 248/272 (91%)
 Strand = Plus / Minus

                                                                            
Query: 130      ggtccccactccctgaggtatttcgacaccgccgtgtcccggcccgaccgcgggaagccc 189
                ||||||||||||||||| |||||| ||||||||||||||||||||||||||||| |  | 
Sbjct: 24686712 ggtccccactccctgagctatttctacaccgccgtgtcccggcccgaccgcggggactct 24686653

                                                                            
Query: 190      cgtttcatctccgtcggctacgtggacgacacgcagttcgtgcggttcgacagcgacgcc 249
                || |||||| |||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct: 24686652 cgcttcatcgccgtcggctacgtggacgacacgcagttcgtgcggttcgacaactacgcc 24686593

                                                                            
Query: 250      ccgaatccgcggatggagccgcgggcgccgtggatagagcaggaggggcaggagtattgg 309
                |||||||||||||||||||| |||| |||||||||| |||||||||||||||| ||||||
Sbjct: 24686592 ccgaatccgcggatggagcctcgggtgccgtggatacagcaggaggggcaggactattgg 24686533

                                                                            
Query: 310      gatgaggagacgcggaacgccatgggcagcgcacagactttccgagtgaacctgaacaac 369
                ||||||||||||||||| | || || || ||||||||||| | |||||  |||||||| |
Sbjct: 24686532 gatgaggagacgcggaaagtcaaggacaacgcacagacttacggagtgggcctgaacacc 24686473

                                                
Query: 370      ctgcgcggctactacaaccagagcgaggccgg 401
                ||||||||||||||||||||||||||||||||
Sbjct: 24686472 ctgcgcggctactacaaccagagcgaggccgg 24686441



 Score =  339 bits (171), Expect = 3e-90
 Identities = 219/235 (93%)
 Strand = Plus / Minus

                                                                            
Query: 1146     agtgtgagacagctgccttgtggggactaagggacacaagatttgttcacgtcccacttt 1205
                |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 24704880 agtgtgagacagctgccttgtggggactgagtgacacaagatttgttcacgtcccacttt 24704821

                                                                            
Query: 1206     gtgacttcagaccccctgactcctatttctgcagctgcctctgaaagggtctgtgttcct 1265
                ||||||||||| |||||||||||||||||||||||||| |||||| | ||||||||||||
Sbjct: 24704820 gtgacttcagatcccctgactcctatttctgcagctgcatctgaatgtgtctgtgttcct 24704761

                                                                            
Query: 1266     atgagcatcctgagaggaggtggggaccctggcccagccctgccccccatgtcccctctt 1325
                ||| ||||| ||||||||||||||||| |||||||||||||| |||||| |||||||| |
Sbjct: 24704760 atgcgcatcatgagaggaggtggggacactggcccagccctgtcccccacgtcccctcct 24704701

                                                                       
Query: 1326     caccctgacctgtgttctctttcctgatccactttccagctccaacaggttgggg 1380
                ||||||||||||||||||||| ||||||||||||| |||||||| ||||| ||||
Sbjct: 24704700 caccctgacctgtgttctcttccctgatccacttttcagctccagcaggtggggg 24704646



 Score =  335 bits (169), Expect = 5e-89
 Identities = 250/277 (90%)
 Strand = Plus / Minus

                                                                            
Query: 400      gggtctcacaccctccagagcatgtacggctgcgacgtggggccagactggctcttcctc 459
                |||||||||||||||||||||||||  |||||| || |||| |||||| ||||| |||||
Sbjct: 24686217 gggtctcacaccctccagagcatgtttggctgctacttgggaccagacgggctcctcctc 24686158

                                                                            
Query: 460      cgcgggtacagtcaggacgcctacgacggcgccgattacatcgccctgaacgaggacctg 519
                | ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24686157 cacgggtacagacaggacgcctacgacggcgccgattacatcgccctgaacgaggacctg 24686098

                                                                            
Query: 520      cgctcctggaccgcggcggacacggcggctcagatcaccaagcgcaagtgggaggcggcc 579
                |||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||
Sbjct: 24686097 cgctcctggaccgcggcggacatggcggctcagatctccaagcgcaagtgggaggcggcc 24686038

                                                                            
Query: 580      gatgaggcggagcaaatgagaagctacctggagggcgcgtgtgtggagtggctccagaaa 639
                |||| |||||||||   ||| ||||||||| ||||   ||||||||||| |||||  | |
Sbjct: 24686037 gatgcggcggagcactggaggagctacctgcagggactgtgtgtggagtcgctccgcaga 24685978

                                                     
Query: 640      tacctgcagatggggaataacacgctgcagcgcgcag 676
                |||||| ||||||||||  ||||||||||||||||||
Sbjct: 24685977 tacctggagatggggaaggacacgctgcagcgcgcag 24685941



 Score =  327 bits (165), Expect = 1e-86
 Identities = 249/277 (89%)
 Strand = Plus / Minus

                                                                            
Query: 400      gggtctcacaccctccagagcatgtacggctgcgacgtggggccagactggctcttcctc 459
                |||||||||||||||||||| ||||  |||||| || |||| |||||| ||||| |||||
Sbjct: 24750731 gggtctcacaccctccagagaatgtttggctgctacttgggaccagacgggctcctcctc 24750672

                                                                            
Query: 460      cgcgggtacagtcaggacgcctacgacggcgccgattacatcgccctgaacgaggacctg 519
                |||||||||  |||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 24750671 cgcgggtacgatcaggacgcctacgacggcgccgattacctcgccctgaacgaggacctg 24750612

                                                                            
Query: 520      cgctcctggaccgcggcggacacggcggctcagatcaccaagcgcaagtgggaggcggcc 579
                |||||||||||||||||||||| ||||||||||||| |||||||||||  ||||| ||||
Sbjct: 24750611 cgctcctggaccgcggcggacatggcggctcagatctccaagcgcaagcaggaggaggcc 24750552

                                                                            
Query: 580      gatgaggcggagcaaatgagaagctacctggagggcgcgtgtgtggagtggctccagaaa 639
                |||| ||||||||  ||||| ||||||||| ||||| |||||||||||| |||||  |||
Sbjct: 24750551 gatgtggcggagcggatgaggagctacctgcagggcacgtgtgtggagtcgctccgcaaa 24750492

                                                     
Query: 640      tacctgcagatggggaataacacgctgcagcgcgcag 676
                |||||| ||||||||||  ||||||||||||||||||
Sbjct: 24750491 tacctggagatggggaaggacacgctgcagcgcgcag 24750455



 Score =  325 bits (164), Expect = 5e-86
 Identities = 271/306 (88%), Gaps = 3/306 (0%)
 Strand = Plus / Minus

                                                                            
Query: 1447     gggagccgaggaaacacaggaggccaaggaagggaactagcctgacggcacagttccaaa 1506
                |||||||||||| | |||| ||||||||||||||||||||||||| ||||||||||| ||
Sbjct: 20392506 gggagccgaggagatacagaaggccaaggaagggaactagcctgatggcacagttccgaa 20392447

                                                                            
Query: 1507     ggcagggttcctaaccaagggaaaagagcctacccaccggcgcagttccaagggtaggtt 1566
                |||||||||||| |  ||   |||| ||||||||| ||||| | ||||  |||| |||||
Sbjct: 20392446 ggcagggttcctgaggaa---aaaaaagcctacccgccggcaccgttctgagggcaggtt 20392390

                                                                            
Query: 1567     tagaaatagggaaaggggcttacccagtggcacagttccaagggcaagttataaaaataa 1626
                ||||||||||||||  ||||||||  | ||||| ||||  |||||||||| |||||||||
Sbjct: 20392389 tagaaatagggaaaaaggcttaccaggcggcactgttctgagggcaagttctaaaaataa 20392330

                                                                            
Query: 1627     tgaggctcacctgctaacccgactacaacggcaacaataacaaaacgaaggttttgcaca 1686
                ||||||||||||||||||||||| |||||| ||||||||| |||| ||||| ||||||||
Sbjct: 20392329 tgaggctcacctgctaacccgacaacaacgacaacaataataaaatgaaggctttgcaca 20392270

                                                                            
Query: 1687     atagtgcaagaataaaaattgcttcttggaaaattcagtctttcctgttgtttacttatt 1746
                |||||||||| |||||||||| ||||||||||||||||||||||||||| ||||||||||
Sbjct: 20392269 atagtgcaaggataaaaattgtttcttggaaaattcagtctttcctgttatttacttatt 20392210

                      
Query: 1747     actcag 1752
                ||||||
Sbjct: 20392209 actcag 20392204



 Score =  319 bits (161), Expect = 3e-84
 Identities = 248/277 (89%)
 Strand = Plus / Minus

                                                                            
Query: 400      gggtctcacaccctccagagcatgtacggctgcgacgtggggccagactggctcttcctc 459
                ||||||||||||||||||||| |||  |||||||||||||| |||||| ||||| |||||
Sbjct: 24658161 gggtctcacaccctccagagcttgtttggctgcgacgtgggaccagaccggctcctcctc 24658102

                                                                            
Query: 460      cgcgggtacagtcaggacgcctacgacggcgccgattacatcgccctgaacgaggacctg 519
                ||| ||||| | | |||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct: 24658101 cgccggtaccgacgggacacctacgacggcgccgattacgtcgccctgaacgaggacctg 24658042

                                                                            
Query: 520      cgctcctggaccgcggcggacacggcggctcagatcaccaagcgcaagtgggaggcggcc 579
                |||||||||||||||||||||||||||||||||||| ||||  ||||||||||| |||||
Sbjct: 24658041 cgctcctggaccgcggcggacacggcggctcagatctccaaatgcaagtgggagacggcc 24657982

                                                                            
Query: 580      gatgaggcggagcaaatgagaagctacctggagggcgcgtgtgtggagtggctccagaaa 639
                 ||| |||||||||   ||| ||||||||| ||||| |||||||||||||||| ||||||
Sbjct: 24657981 aatgtggcggagcaggagaggagctacctgcagggcacgtgtgtggagtggcttcagaaa 24657922

                                                     
Query: 640      tacctgcagatggggaataacacgctgcagcgcgcag 676
                |||||| |||||||| |  ||||||||||||||||||
Sbjct: 24657921 tacctggagatgggggaggacacgctgcagcgcgcag 24657885



 Score =  315 bits (159), Expect = 5e-83
 Identities = 216/235 (91%)
 Strand = Plus / Minus

                                                                            
Query: 1146     agtgtgagacagctgccttgtggggactaagggacacaagatttgttcacgtcccacttt 1205
                |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 24655959 agtgtgagacagctgccttgtggggactgagggacacaagatttgttcacgtcccacttt 24655900

                                                                            
Query: 1206     gtgacttcagaccccctgactcctatttctgcagctgcctctgaaagggtctgtgttcct 1265
                ||||||||||| |||||||||||| |||||||||||||||||||||| ||||||||| ||
Sbjct: 24655899 gtgacttcagatcccctgactcctgtttctgcagctgcctctgaaagtgtctgtgtttct 24655840

                                                                            
Query: 1266     atgagcatcctgagaggaggtggggaccctggcccagccctgccccccatgtcccctctt 1325
                ||||||||| |||||| ||||||| || |||||| | ||||| ||||||  ||||||| |
Sbjct: 24655839 atgagcatcatgagagtaggtgggaacactggcctaaccctgtcccccacatcccctcct 24655780

                                                                       
Query: 1326     caccctgacctgtgttctctttcctgatccactttccagctccaacaggttgggg 1380
                ||||||||||||||||||||| ||||||||||||| |||||||| ||||| ||||
Sbjct: 24655779 caccctgacctgtgttctcttccctgatccacttttcagctccagcaggtggggg 24655725



 Score =  311 bits (157), Expect = 8e-82
 Identities = 218/237 (91%), Gaps = 1/237 (0%)
 Strand = Plus / Plus

                                                                            
Query: 1146     agtgtgagacagctgccttgtggggactaagggacacaagatttgttcacgtcccacttt 1205
                |||||||||||||||||||||||||||| || |||||| |||||||||||||||||||||
Sbjct: 24604646 agtgtgagacagctgccttgtggggactgagtgacaca-gatttgttcacgtcccacttt 24604704

                                                                            
Query: 1206     gtgacttcagaccccctgactcctatttctgcagctgcctctgaaagggtctgtgttcct 1265
                ||||||||||| |||||||||||| |||||||||| || | |||| | |||||||| |||
Sbjct: 24604705 gtgacttcagatcccctgactcctgtttctgcagcagcatttgaatgtgtctgtgtccct 24604764

                                                                            
Query: 1266     atgagcatcctgagaggaggtggggaccctggcccagccctgccccccatgtcccctctt 1325
                ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| |
Sbjct: 24604765 atgagcatcctgagaggaggtggggaccctggcccagtcctgccccccacgtcccctcct 24604824

                                                                         
Query: 1326     caccctgacctgtgttctctttcctgatccactttccagctccaacaggttgggggg 1382
                ||||||||||||||||||||| |||||||| |||||||| |||| ||||| ||||||
Sbjct: 24604825 caccctgacctgtgttctcttccctgatcctctttccagttccagcaggtggggggg 24604881



 Score =  311 bits (157), Expect = 8e-82
 Identities = 247/277 (89%)
 Strand = Plus / Minus

                                                                            
Query: 400      gggtctcacaccctccagagcatgtacggctgcgacgtggggccagactggctcttcctc 459
                ||||||||||||||||||||| |||  |||||||||||||| |||||| ||||| |||||
Sbjct: 24723290 gggtctcacaccctccagagcttgtttggctgcgacgtgggaccagaccggctcctcctc 24723231

                                                                            
Query: 460      cgcgggtacagtcaggacgcctacgacggcgccgattacatcgccctgaacgaggacctg 519
                ||| ||||| | | ||||| ||||||||||||||||||  ||||||||||| ||||||||
Sbjct: 24723230 cgccggtaccgacgggacgtctacgacggcgccgattaggtcgccctgaacaaggacctg 24723171

                                                                            
Query: 520      cgctcctggaccgcggcggacacggcggctcagatcaccaagcgcaagtgggaggcggcc 579
                ||||||||||||||||| |||||||||||||||||| |||||| |||||||||| |||||
Sbjct: 24723170 cgctcctggaccgcggctgacacggcggctcagatctccaagcacaagtgggagacggcc 24723111

                                                                            
Query: 580      gatgaggcggagcaaatgagaagctacctggagggcgcgtgtgtggagtggctccagaaa 639
                 ||| |||||||||   ||| ||||||||| ||||| |||||||||||||||||||||||
Sbjct: 24723110 aatgtggcggagcaggagaggagctacctgcagggcacgtgtgtggagtggctccagaaa 24723051

                                                     
Query: 640      tacctgcagatggggaataacacgctgcagcgcgcag 676
                |||||| |||||||| |  ||||||||||||||||||
Sbjct: 24723050 tacctggagatgggggaggacacgctgcagcgcgcag 24723014



 Score =  307 bits (155), Expect = 1e-80
 Identities = 272/307 (88%), Gaps = 3/307 (0%)
 Strand = Plus / Minus

                                                                            
Query: 1443     tgcggggagccgaggaaacacaggaggccaaggaagggaactagcctgacggcacagttc 1502
                ||||||||||| |||| |  ||||||||||||||||||||||||||||||||||||||||
Sbjct: 80560412 tgcggggagccaaggagatgcaggaggccaaggaagggaactagcctgacggcacagttc 80560353

                                                                            
Query: 1503     caaaggcagggttcctaaccaagggaaaaga-gcctacccaccggcgcagttccaagggt 1561
                | |||||||||||||||||| ||| |||| | |||||||  ||||| |||||||||||| 
Sbjct: 80560352 cgaaggcagggttcctaaccgaggaaaaaaaagcctacctgccggcacagttccaagggc 80560293

                                                                            
Query: 1562     aggtttagaaatagggaaaggggcttacccagtggcacagttccaagggcaagttataaa 1621
                |||||||||||||||| || |||||||||| |||||||||||   |||||||||| ||||
Sbjct: 80560292 aggtttagaaataggggaaagggcttacccggtggcacagttatgagggcaagttctaaa 80560233

                                                                            
Query: 1622     aataatgaggctcacctgctaacccgactacaacggcaacaataacaaaacgaaggtttt 1681
                |||||||||||||||||||||||| ||| |||| ||| |||||||||||| ||||| |||
Sbjct: 80560232 aataatgaggctcacctgctaacctgacaacaatggctacaataacaaaatgaaggcttt 80560173

                                                                            
Query: 1682     gcacaatagtgcaagaataaaaattgcttcttgg-aaaattcagtctttcctgttgttta 1740
                |||||| ||||||||||| ||||| |||||| || |||| |||||||||| |||  ||||
Sbjct: 80560172 gcacaacagtgcaagaat-aaaatcgcttctcggaaaaaatcagtctttcttgtcattta 80560114

                       
Query: 1741     cttatta 1747
                |||||||
Sbjct: 80560113 cttatta 80560107



 Score =  303 bits (153), Expect = 2e-79
 Identities = 232/257 (90%), Gaps = 1/257 (0%)
 Strand = Plus / Plus

                                                                            
Query: 1496     acagttccaaaggcagggttcctaaccaagggaaaagagcctacccaccggcgcagttcc 1555
                |||||||| |||||||||||||||||| ||| |||| ||||||||||||||| |||||||
Sbjct: 33055141 acagttccgaaggcagggttcctaaccgaggaaaaaaagcctacccaccggcacagttcc 33055200

                                                                            
Query: 1556     aagggtaggtttagaaatagggaaaggggcttacccagtggcacagttccaagggcaagt 1615
                 |||| ||||| ||||||||||||| |||||||||| |  |||||||||| |||||||||
Sbjct: 33055201 gagggcaggttcagaaatagggaaaagggcttaccccgcagcacagttccgagggcaagt 33055260

                                                                            
Query: 1616     tataaaaataatgaggctcacctgctaacccgactacaacggcaacaataacaaaacgaa 1675
                | |||||| ||||||||||||||||||||||||| ||||| ||||||||||||||| |||
Sbjct: 33055261 tctaaaaacaatgaggctcacctgctaacccgacaacaac-gcaacaataacaaaatgaa 33055319

                                                                            
Query: 1676     ggttttgcacaatagtgcaagaataaaaattgcttcttggaaaattcagtctttcctgtt 1735
                || ||||||||| |||||||||||  |||| |||||||||||||||||||||||||||||
Sbjct: 33055320 ggctttgcacaacagtgcaagaatggaaatcgcttcttggaaaattcagtctttcctgtt 33055379

                                 
Query: 1736     gtttacttattactcag 1752
                 ||||||||||| ||||
Sbjct: 33055380 atttacttattattcag 33055396



 Score =  299 bits (151), Expect = 3e-78
 Identities = 202/219 (92%)
 Strand = Plus / Minus

                                                                            
Query: 1146     agtgtgagacagctgccttgtggggactaagggacacaagatttgttcacgtcccacttt 1205
                ||||||||| ||||||||||| |||||| |||||||||||||||||||||||||||||||
Sbjct: 24721089 agtgtgagagagctgccttgtagggactgagggacacaagatttgttcacgtcccacttt 24721030

                                                                            
Query: 1206     gtgacttcagaccccctgactcctatttctgcagctgcctctgaaagggtctgtgttcct 1265
                |||||| |||| |||||||||| | |||||||||| || |||||||| ||||||||||||
Sbjct: 24721029 gtgactccagatcccctgactcttgtttctgcagcagcatctgaaagtgtctgtgttcct 24720970

                                                                            
Query: 1266     atgagcatcctgagaggaggtggggaccctggcccagccctgccccccatgtcccctctt 1325
                ||||||||| ||||| ||||||||||||||||||||| |||||||||||||||||||  |
Sbjct: 24720969 atgagcatcatgagaagaggtggggaccctggcccagtcctgccccccatgtccccttct 24720910

                                                       
Query: 1326     caccctgacctgtgttctctttcctgatccactttccag 1364
                ||||||||||||||||||||| |||||||| ||||||||
Sbjct: 24720909 caccctgacctgtgttctcttccctgatcctctttccag 24720871



 Score =  287 bits (145), Expect = 1e-74
 Identities = 184/197 (93%)
 Strand = Plus / Minus

                                                                            
Query: 130      ggtccccactccctgaggtatttcgacaccgccgtgtcccggcccgaccgcgggaagccc 189
                |||||||||||||| || |||||   |||||||||||||||||||||||||||| |||||
Sbjct: 24707549 ggtccccactccctaagctattttttcaccgccgtgtcccggcccgaccgcggggagccc 24707490

                                                                            
Query: 190      cgtttcatctccgtcggctacgtggacgacacgcagttcgtgcggttcgacagcgacgcc 249
                ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 24707489 cgtttcatcgccgtcggctacgtgaacgacacgcagttcgtgcggttcgacagcgacgcc 24707430

                                                                            
Query: 250      ccgaatccgcggatggagccgcgggcgccgtggatagagcaggaggggcaggagtattgg 309
                ||||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||||
Sbjct: 24707429 ccgaatccgcggatggagccgcgggcgccgtggatggagcaggaggggcaggactgttgg 24707370

                                 
Query: 310      gatgaggagacgcggaa 326
                ||| || ||||||||||
Sbjct: 24707369 gatcagcagacgcggaa 24707353



 Score =  280 bits (141), Expect = 3e-72
 Identities = 243/277 (87%)
 Strand = Plus / Minus

                                                                            
Query: 400      gggtctcacaccctccagagcatgtacggctgcgacgtggggccagactggctcttcctc 459
                ||||||||||||||||||| || ||| |||||||||||||| |||||| ||||| |||||
Sbjct: 24707089 gggtctcacaccctccagaccaagtagggctgcgacgtgggaccagacgggctcctcctc 24707030

                                                                            
Query: 460      cgcgggtacagtcaggacgcctacgacggcgccgattacatcgccctgaacgaggacctg 519
                | | ||||||| ||||||||||||| |||| | |||||| ||||||||||||||||||||
Sbjct: 24707029 ctctggtacagacaggacgcctacggcggccctgattacgtcgccctgaacgaggacctg 24706970

                                                                            
Query: 520      cgctcctggaccgcggcggacacggcggctcagatcaccaagcgcaagtgggaggcggcc 579
                |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 24706969 cgctcctggaccgcggcggacacggcggctcagatcgccaagcgcaagtgggaggcggcc 24706910

                                                                            
Query: 580      gatgaggcggagcaaatgagaagctacctggagggcgcgtgtgtggagtggctccagaaa 639
                 ||| ||| |||||   ||| ||||||||| |||||  |||||||||||||||||  | |
Sbjct: 24706909 aatgtggcagagcaggagaggagctacctgcagggccggtgtgtggagtggctccgcaga 24706850

                                                     
Query: 640      tacctgcagatggggaataacacgctgcagcgcgcag 676
                ||| || ||||||  ||  |||||||||||| |||||
Sbjct: 24706849 tacgtggagatggcaaaggacacgctgcagcacgcag 24706813



 Score =  272 bits (137), Expect = 7e-70
 Identities = 197/219 (89%), Gaps = 11/219 (5%)
 Strand = Plus / Minus

                                                                            
Query: 1146     agtgtgagacagctgccttgtggggactaagggacacaagatttgttcacgtcccacttt 1205
                |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||
Sbjct: 24684019 agtgtgagacagctgccttgtgggaactgagggacacaagatttgttcacgtcccacttt 24683960

                                                                            
Query: 1206     gtgacttcagaccccctgactcctatttctgcagctgcctctgaaagggtctgtgttcct 1265
                |||| | |||| |||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 24683959 gtgaatccagatcccctgactcctgtttctgcagctgcctctgaaagggtctgtgttcct 24683900

                                                                            
Query: 1266     atgagcatcctgagaggaggtggggaccctggcccagccctgccccccatgtcccctctt 1325
                ||||||||||||||||||||||||||||||||           |||||| |||||||| |
Sbjct: 24683899 atgagcatcctgagaggaggtggggaccctgg-----------cccccacgtcccctcct 24683851

                                                       
Query: 1326     caccctgacctgtgttctctttcctgatccactttccag 1364
                ||||||||||||||||||||| | |||||| ||||||||
Sbjct: 24683850 caccctgacctgtgttctcttccatgatcctctttccag 24683812



 Score =  264 bits (133), Expect = 2e-67
 Identities = 226/257 (87%)
 Strand = Plus / Minus

                                                                            
Query: 1496     acagttccaaaggcagggttcctaaccaagggaaaagagcctacccaccggcgcagttcc 1555
                |||||||| |||||||||| ||||||| |||  ||| ||||||||| ||||| |||||||
Sbjct: 50593875 acagttccgaaggcagggtacctaaccgaggagaaaaagcctacccgccggcacagttcc 50593816

                                                                            
Query: 1556     aagggtaggtttagaaatagggaaaggggcttacccagtggcacagttccaagggcaagt 1615
                 |||| ||||||||||| ||||||| |||||||| | |  |||||||||| |||||||||
Sbjct: 50593815 gagggcaggtttagaaacagggaaaagggcttactcggcagcacagttccgagggcaagt 50593756

                                                                            
Query: 1616     tataaaaataatgaggctcacctgctaacccgactacaacggcaacaataacaaaacgaa 1675
                | || ||  ||||||||||||||||||||||||| ||||||||||||||||||||| |||
Sbjct: 50593755 tctataagcaatgaggctcacctgctaacccgacaacaacggcaacaataacaaaatgaa 50593696

                                                                            
Query: 1676     ggttttgcacaatagtgcaagaataaaaattgcttcttggaaaattcagtctttcctgtt 1735
                || ||||| ||| ||||||||||||||||| |||||| |||||| |||||||||||||||
Sbjct: 50593695 ggctttgcgcaacagtgcaagaataaaaatcgcttctcggaaaaatcagtctttcctgtt 50593636

                                 
Query: 1736     gtttacttattactcag 1752
                 ||||||||||| ||||
Sbjct: 50593635 atttacttattattcag 50593619



 Score =  262 bits (132), Expect = 6e-67
 Identities = 132/132 (100%)
 Strand = Plus / Minus

                                                                            
Query: 1        gcggttctaaactctccatccattcgcctcgactccgcttctctccagactccgaggctg 60
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24645306 gcggttctaaactctccatccattcgcctcgactccgcttctctccagactccgaggctg 24645247

                                                                            
Query: 61       aggatcatggggccccgagccctcttcttgctgctgtcggggaccctggccctgactggt 120
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24645246 aggatcatggggccccgagccctcttcttgctgctgtcggggaccctggccctgactggt 24645187

                            
Query: 121      acccgggagggt 132
                ||||||||||||
Sbjct: 24645186 acccgggagggt 24645175



 Score =  260 bits (131), Expect = 3e-66
 Identities = 197/219 (89%)
 Strand = Plus / Minus

                                                                            
Query: 1146     agtgtgagacagctgccttgtggggactaagggacacaagatttgttcacgtcccacttt 1205
                ||||||||||||||||||||||||||| ||| |  || ||||| |||||| |||||||||
Sbjct: 26674560 agtgtgagacagctgccttgtggggaccaagtgttacgagattcgttcacatcccacttt 26674501

                                                                            
Query: 1206     gtgacttcagaccccctgactcctatttctgcagctgcctctgaaagggtctgtgttcct 1265
                ||||||||||| |||||||||||| |||||||||| || | |||  | |||||||| |||
Sbjct: 26674500 gtgacttcagatcccctgactcctgtttctgcagcagcatttgagtgtgtctgtgtccct 26674441

                                                                            
Query: 1266     atgagcatcctgagaggaggtggggaccctggcccagccctgccccccatgtcccctctt 1325
                ||||||||| |||||||||||||||||||||||||||||||| |||||| |||||||| |
Sbjct: 26674440 atgagcatcatgagaggaggtggggaccctggcccagccctgtcccccacgtcccctcct 26674381

                                                       
Query: 1326     caccctgacctgtgttctctttcctgatccactttccag 1364
                ||||||||||||||||||||| |||||||| ||||||||
Sbjct: 26674380 caccctgacctgtgttctcttccctgatcctctttccag 26674342



 Score =  250 bits (126), Expect = 2e-63
 Identities = 234/270 (86%)
 Strand = Plus / Minus

                                                                            
Query: 130      ggtccccactccctgaggtatttcgacaccgccgtgtcccggcccgaccgcgggaagccc 189
                ||||||||||||||||| ||| ||  |||| | ||||||||||| | ||||||| |||||
Sbjct: 24723781 ggtccccactccctgagctatctcttcacctcggtgtcccggcctggccgcggggagccc 24723722

                                                                            
Query: 190      cgtttcatctccgtcggctacgtggacgacacgcagttcgtgcggttcgacagcgacgcc 249
                || |||||| ||||||||| |||||||||||||| ||| |||||||||||||||||||||
Sbjct: 24723721 cgcttcatcgccgtcggctgcgtggacgacacgccgttggtgcggttcgacagcgacgcc 24723662

                                                                            
Query: 250      ccgaatccgcggatggagccgcgggcgccgtggatagagcaggaggggcaggagtattgg 309
                ||||| | | ||| |||||||||||||  |  |||| |||||||||||| ||||||||||
Sbjct: 24723661 ccgaagctgaggaaggagccgcgggcgtggaagataaagcaggaggggccggagtattgg 24723602

                                                                            
Query: 310      gatgaggagacgcggaacgccatgggcagcgcacagactttccgagtgaacctgaacaac 369
                || ||||||||||||| |  || || || |||||||||| || ||| ||| ||||||| |
Sbjct: 24723601 gacgaggagacgcggatcagcaaggacaacgcacagactctctgagggaaactgaacacc 24723542

                                              
Query: 370      ctgcgcggctactacaaccagagcgaggcc 399
                ||||||||||||||||||||||||||||||
Sbjct: 24723541 ctgcgcggctactacaaccagagcgaggcc 24723512



 Score =  242 bits (122), Expect = 6e-61
 Identities = 234/270 (86%), Gaps = 1/270 (0%)
 Strand = Plus / Minus

                                                                            
Query: 130      ggtccccactccctgaggtatttcgacaccgccgtgtcccggcccgaccgcgggaagccc 189
                ||||||||||||||||| ||| ||  |||| | ||||||||||| | ||||||| |||||
Sbjct: 24658651 ggtccccactccctgagctatctcttcacctcggtgtcccggcctggccgcggggagccc 24658592

                                                                            
Query: 190      cgtttcatctccgtcggctacgtggacgacacgcagttcgtgcggttcgacagcgacgcc 249
                || |||||| ||||||||| |||||||||||||| ||| |||||||||||||||||||||
Sbjct: 24658591 cgcttcatcgccgtcggctgcgtggacgacacgccgttggtgcggttcgacagcgacgcc 24658532

                                                                            
Query: 250      ccgaatccgcggatggagccgcgggcgccgtggatagagcaggaggggcaggagtattgg 309
                ||||| | | ||| |||||||||||||  |  |||| |||||||||||| |||||| |||
Sbjct: 24658531 ccgaagctgaggaaggagccgcgggcgtggaagataaagcaggaggggccggagta-tgg 24658473

                                                                            
Query: 310      gatgaggagacgcggaacgccatgggcagcgcacagactttccgagtgaacctgaacaac 369
                || ||||||||||||| |  || || || |||||||||| |||||| ||| ||||||| |
Sbjct: 24658472 gacgaggagacgcggatcagcaaggacaacgcacagactctccgagggaaactgaacacc 24658413

                                              
Query: 370      ctgcgcggctactacaaccagagcgaggcc 399
                ||||||||||||||||||||||||||||||
Sbjct: 24658412 ctgcgcggctactacaaccagagcgaggcc 24658383



 Score =  226 bits (114), Expect = 4e-56
 Identities = 114/114 (100%)
 Strand = Plus / Minus

                                                                            
Query: 952      gaccctcctcagccccccgtccccatcgtgggcatcactgttggcctggttctcgtcctg 1011
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24643101 gaccctcctcagccccccgtccccatcgtgggcatcactgttggcctggttctcgtcctg 24643042

                                                                      
Query: 1012     gttgctggagccgtggtggctggagttgtgatctggaggaagaagcgctcaggt 1065
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24643041 gttgctggagccgtggtggctggagttgtgatctggaggaagaagcgctcaggt 24642988



 Score =  210 bits (106), Expect = 2e-51
 Identities = 112/114 (98%)
 Strand = Plus / Minus

                                                                            
Query: 952      gaccctcctcagccccccgtccccatcgtgggcatcactgttggcctggttctcgtcctg 1011
                ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 24749451 gaccctcctcagccccccgtccccatcgtgggcatcattgttggcctggttctcgtcctg 24749392

                                                                      
Query: 1012     gttgctggagccgtggtggctggagttgtgatctggaggaagaagcgctcaggt 1065
                || |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24749391 gtcgctggagccgtggtggctggagttgtgatctggaggaagaagcgctcaggt 24749338



 Score =  200 bits (101), Expect = 2e-48
 Identities = 164/185 (88%)
 Strand = Plus / Minus

                                                                            
Query: 136      cactccctgaggtatttcgacaccgccgtgtcccggcccgaccgcgggaagccccgtttc 195
                |||||| ||||||||||| |||| | |||||||||||||| || |||| ||||||| | |
Sbjct: 27210466 cactccatgaggtatttccacacggtcgtgtcccggcccggccacggggagccccggtac 27210407

                                                                            
Query: 196      atctccgtcggctacgtggacgacacgcagttcgtgcggttcgacagcgacgccccgaat 255
                 |    |||||||| ||||||||||||||||||||||||||||||||||| || | ||||
Sbjct: 27210406 cttgaggtcggctatgtggacgacacgcagttcgtgcggttcgacagcgaagctcagaat 27210347

                                                                            
Query: 256      ccgcggatggagccgcgggcgccgtggatagagcaggaggggcaggagtattgggatgag 315
                ||| ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||
Sbjct: 27210346 ccgaggatggagccgcgggcgccgtgggtggagcaggaggggcaggagtattgggatgag 27210287

                     
Query: 316      gagac 320
                |||||
Sbjct: 27210286 gagac 27210282



 Score =  200 bits (101), Expect = 2e-48
 Identities = 164/185 (88%)
 Strand = Plus / Minus

                                                                            
Query: 136      cactccctgaggtatttcgacaccgccgtgtcccggcccgaccgcgggaagccccgtttc 195
                |||||| ||||||||||| |||| | |||||||||||||| || |||| ||||||| | |
Sbjct: 27629992 cactccatgaggtatttccacacggtcgtgtcccggcccggccacggggagccccggtac 27629933

                                                                            
Query: 196      atctccgtcggctacgtggacgacacgcagttcgtgcggttcgacagcgacgccccgaat 255
                 |    |||||||| ||||||||||||||||||||||||||||||||||| || | ||||
Sbjct: 27629932 cttgaggtcggctatgtggacgacacgcagttcgtgcggttcgacagcgaagctcagaat 27629873

                                                                            
Query: 256      ccgcggatggagccgcgggcgccgtggatagagcaggaggggcaggagtattgggatgag 315
                ||| ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||
Sbjct: 27629872 ccgaggatggagccgcgggcgccgtgggtggagcaggaggggcaggagtattgggatgag 27629813

                     
Query: 316      gagac 320
                |||||
Sbjct: 27629812 gagac 27629808



 Score =  194 bits (98), Expect = 1e-46
 Identities = 110/114 (96%)
 Strand = Plus / Plus

                                                                            
Query: 952      gaccctcctcagccccccgtccccatcgtgggcatcactgttggcctggttctcgtcctg 1011
                |||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||
Sbjct: 24603747 gaccctcctcagccccccatccccatcgtgggcatcattgttggcctggttctcgtcctg 24603806

                                                                      
Query: 1012     gttgctggagccgtggtggctggagttgtgatctggaggaagaagcgctcaggt 1065
                || ||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 24603807 gtcgctggagccatggtggctggagttgtgatctggaggaagaagcgctcaggt 24603860



 Score =  194 bits (98), Expect = 1e-46
 Identities = 110/114 (96%)
 Strand = Plus / Plus

                                                                            
Query: 952      gaccctcctcagccccccgtccccatcgtgggcatcactgttggcctggttctcgtcctg 1011
                ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 27616458 gaccctcctcagccccccgtccccatcgtgggcatcattgttggcctggttctcgtcctg 27616517

                                                                      
Query: 1012     gttgctggagccgtggtggctggagttgtgatctggaggaagaagcgctcaggt 1065
                || ||||||||||||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 27616518 gtcgctggagccgtggtgactggagttgtgatctggaggaagaagtgctcaggt 27616571



 Score =  192 bits (97), Expect = 5e-46
 Identities = 112/116 (96%), Gaps = 1/116 (0%)
 Strand = Plus / Minus

                                                                            
Query: 1805     gattcantaaaattggaacaacaaaaattggaatgagtttcaccttggtgaaattccccc 1864
                |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24641527 gattcagtaaaattggaacaacaaaaattggaatgagtttcaccttggtgaaattccccc 24641468

                                                                        
Query: 1865     tattcaaatctaatacaagcaaaaac-aagtgttcactggtttgttaccagtaaaa 1919
                |||||| ||||||||||||||||||| ||||||||||||||||||||| |||||||
Sbjct: 24641467 tattcagatctaatacaagcaaaaacaaagtgttcactggtttgttacaagtaaaa 24641412



 Score =  186 bits (94), Expect = 3e-44
 Identities = 109/114 (95%)
 Strand = Plus / Minus

                                                                            
Query: 952      gaccctcctcagccccccgtccccatcgtgggcatcactgttggcctggttctcgtcctg 1011
                |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 24722005 gaccctgctcagccccccgtccccatcgtgggcatcactgttggcctggttctggtcctg 24721946

                                                                      
Query: 1012     gttgctggagccgtggtggctggagttgtgatctggaggaagaagcgctcaggt 1065
                || ||||||||| |||||||||||| ||||||||||||||||||||||||||||
Sbjct: 24721945 gtcgctggagccatggtggctggagctgtgatctggaggaagaagcgctcaggt 24721892



 Score =  180 bits (91), Expect = 2e-42
 Identities = 106/111 (95%)
 Strand = Plus / Minus

                                                                            
Query: 955      cctcctcagccccccgtccccatcgtgggcatcactgttggcctggttctcgtcctggtt 1014
                ||||| |||||||||||||||||||||||||||  |||||||||||||||||||||||| 
Sbjct: 26675478 cctccacagccccccgtccccatcgtgggcatctttgttggcctggttctcgtcctggtc 26675419

                                                                   
Query: 1015     gctggagccgtggtggctggagttgtgatctggaggaagaagcgctcaggt 1065
                ||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 26675418 gctggagccatggtggctggagttgtgatctggaggaagaagcgctcaggt 26675368



 Score =  178 bits (90), Expect = 7e-42
 Identities = 108/114 (94%)
 Strand = Plus / Minus

                                                                            
Query: 952      gaccctcctcagccccccgtccccatcgtgggcatcactgttggcctggttctcgtcctg 1011
                |||||| |||||||||||||||||||||||||||||| ||||||||||||||| ||||||
Sbjct: 24684937 gaccctgctcagccccccgtccccatcgtgggcatcattgttggcctggttctggtcctg 24684878

                                                                      
Query: 1012     gttgctggagccgtggtggctggagttgtgatctggaggaagaagcgctcaggt 1065
                || |||||||| ||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 24684877 gtcgctggagctgtggtggctggagttgtgatctggaggaagacgcgctcaggt 24684824



 Score =  178 bits (90), Expect = 7e-42
 Identities = 108/114 (94%)
 Strand = Plus / Minus

                                                                            
Query: 952      gaccctcctcagccccccgtccccatcgtgggcatcactgttggcctggttctcgtcctg 1011
                |||||| ||||||||||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 24705789 gaccctgctcagccccccgtccccatggtgggcatcactgttggcctggttcttgtcctg 24705730

                                                                      
Query: 1012     gttgctggagccgtggtggctggagttgtgatctggaggaagaagcgctcaggt 1065
                || ||||||||| |||||||||||||||||||||||||||||||| ||||||||
Sbjct: 24705729 gtcgctggagccatggtggctggagttgtgatctggaggaagaagtgctcaggt 24705676



 Score =  155 bits (78), Expect = 1e-34
 Identities = 153/178 (85%)
 Strand = Plus / Plus

                                                                            
Query: 135      ccactccctgaggtatttcgacaccgccgtgtcccggcccgaccgcgggaagccccgttt 194
                ||||||||||||| || || ||||||||||||||||||||| |||| || || |||| | 
Sbjct: 24620297 ccactccctgagggatgtctacaccgccgtgtcccggcccggccgcagggagacccgctc 24620356

                                                                            
Query: 195      catctccgtcggctacgtggacgacacgcagttcgtgcggttcgacagcgacgccccgaa 254
                |||  |||||||||||||||||||||||||  || || ||||||||||||||||||||||
Sbjct: 24620357 cattgccgtcggctacgtggacgacacgcaactcatgaggttcgacagcgacgccccgaa 24620416

                                                                          
Query: 255      tccgcggatggagccgcgggcgccgtggatagagcaggaggggcaggagtattgggat 312
                ||||  | |||||| |||| || ||||||| |||||| ||||||  ||||||||||||
Sbjct: 24620417 tccgaaggtggagctgcggccgtcgtggatggagcagcaggggccagagtattgggat 24620474



 Score =  143 bits (72), Expect = 4e-31
 Identities = 222/272 (81%)
 Strand = Plus / Plus

                                                                            
Query: 130      ggtccccactccctgaggtatttcgacaccgccgtgtcccggcccgaccgcgggaagccc 189
                |||||||||||||||||||||||| |||| ||||||||||| ||    ||  || | |||
Sbjct: 27614449 ggtccccactccctgaggtatttctacacagccgtgtcccgaccgagtcgacgggatccc 27614508

                                                                            
Query: 190      cgtttcatctccgtcggctacgtggacgacacgcagttcgtgcggttcgacagcgacgcc 249
                || |||  |  ||||||||| || |||||||||||||||||||||||||||||| | |||
Sbjct: 27614509 cgcttctccgtcgtcggctatgtagacgacacgcagttcgtgcggttcgacagcaatgcc 27614568

                                                                            
Query: 250      ccgaatccgcggatggagccgcgggcgccgtggatagagcaggaggggcaggagtattgg 309
                ||||||||| ||  |||||||||| | |||||| | |||| |||||| | ||||||||| 
Sbjct: 27614569 ccgaatccgagggaggagccgcggacaccgtgggtggagctggagggcccggagtattgc 27614628

                                                                            
Query: 310      gatgaggagacgcggaacgccatgggcagcgcacagactttccgagtgaacctgaacaac 369
                |||  | | || || | |  || || || | |||||| ||||| ||||| ||||||   |
Sbjct: 27614629 gatcggaacacacgcatctacaaggacacctcacagaatttccaagtgagcctgaatgtc 27614688

                                                
Query: 370      ctgcgcggctactacaaccagagcgaggccgg 401
                ||||||||||||||||||||||||||||||||
Sbjct: 27614689 ctgcgcggctactacaaccagagcgaggccgg 27614720



 Score =  143 bits (72), Expect = 4e-31
 Identities = 108/120 (90%)
 Strand = Plus / Plus

                                                                            
Query: 455      tcctccgcgggtacagtcaggacgcctacgacggcgccgattacatcgccctgaacgagg 514
                ||||||||||||||||||||  |||||| |||||||| |||||||||| |||||||||||
Sbjct: 27614948 tcctccgcgggtacagtcagttcgcctatgacggcgcggattacatcgtcctgaacgagg 27615007

                                                                            
Query: 515      acctgcgctcctggaccgcggcggacacggcggctcagatcaccaagcgcaagtgggagg 574
                ||||||||||||||||||||| || || |||||||||||||||   |||||| |||||||
Sbjct: 27615008 acctgcgctcctggaccgcggtgggcatggcggctcagatcactcggcgcaaatgggagg 27615067



 Score =  141 bits (71), Expect = 2e-30
 Identities = 104/115 (90%)
 Strand = Plus / Minus

                                                                            
Query: 2        cggttctaaactctccatccattcgcctcgactccgcttctctccagactccgaggctga 61
                ||||||||||||||||| |||  || |||  ||| ||||||| |||||||||||||||||
Sbjct: 24687156 cggttctaaactctccacccacccggctctgctcagcttctccccagactccgaggctga 24687097

                                                                       
Query: 62       ggatcatggggccccgagccctcttcttgctgctgtcggggaccctggccctgac 116
                |||||||||||||  ||||||||||| ||||||||||||||||||||||||||||
Sbjct: 24687096 ggatcatggggcctggagccctcttcctgctgctgtcggggaccctggccctgac 24687042



 Score =  139 bits (70), Expect = 6e-30
 Identities = 103/114 (90%)
 Strand = Plus / Minus

                                                                            
Query: 952      gaccctcctcagccccccgtccccatcgtgggcatcactgttggcctggttctcgtcctg 1011
                |||||| |||||||||| |||||||| |||| ||||| |||||||||||| || ||||||
Sbjct: 24656878 gaccctgctcagccccctgtccccattgtggacatcattgttggcctggtactggtcctg 24656819

                                                                      
Query: 1012     gttgctggagccgtggtggctggagttgtgatctggaggaagaagcgctcaggt 1065
                ||  |||||||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct: 24656818 gtctctggagccatggtgactggagttgtgatctggaggaagaagcgctcaggt 24656765



 Score =  137 bits (69), Expect = 3e-29
 Identities = 84/89 (94%)
 Strand = Plus / Minus

                                                                            
Query: 28       ctcgactccgcttctctccagactccgaggctgaggatcatggggccccgagccctcttc 87
                |||||||| ||||||| |||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 24659078 ctcgactcagcttctccccagactccgcggctgaggatcatggggccccgagccctcttc 24659019

                                             
Query: 88       ttgctgctgtcggggaccctggccctgac 116
                 |||||||||||||| |||||||||||||
Sbjct: 24659018 ctgctgctgtcgggggccctggccctgac 24658990



 Score =  129 bits (65), Expect = 6e-27
 Identities = 83/89 (93%)
 Strand = Plus / Minus

                                                                            
Query: 28       ctcgactccgcttctctccagactccgaggctgaggatcatggggccccgagccctcttc 87
                |||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||||
Sbjct: 24724204 ctcgactccgcttctccccagactccgcggctgaggatcatggggccccgaggcctcttc 24724145

                                             
Query: 88       ttgctgctgtcggggaccctggccctgac 116
                 ||||||| |||||| |||||||||||||
Sbjct: 24724144 ctgctgctctcgggggccctggccctgac 24724116



 Score =  119 bits (60), Expect = 6e-24
 Identities = 75/80 (93%)
 Strand = Plus / Minus

                                                                            
Query: 37       gcttctctccagactccgaggctgaggatcatggggccccgagccctcttcttgctgctg 96
                ||||||| |||||| |||||||||||||||||||||||  ||||||||||| ||||||||
Sbjct: 24751635 gcttctccccagaccccgaggctgaggatcatggggcctggagccctcttcctgctgctg 24751576

                                    
Query: 97       tcggggaccctggccctgac 116
                ||||||||||||||||||||
Sbjct: 24751575 tcggggaccctggccctgac 24751556



 Score =  117 bits (59), Expect = 2e-23
 Identities = 101/115 (87%)
 Strand = Plus / Minus

                                                                            
Query: 2        cggttctaaactctccatccattcgcctcgactccgcttctctccagactccgaggctga 61
                ||||||||||||||||| ||| |||||||||||||||||||| ||||||   |||||| |
Sbjct: 24708005 cggttctaaactctccaaccactcgcctcgactccgcttctccccagacaaagaggctaa 24707946

                                                                       
Query: 62       ggatcatggggccccgagccctcttcttgctgctgtcggggaccctggccctgac 116
                |||||||||||||  |||||||  || |||||||||| ||| |||||||||||||
Sbjct: 24707945 ggatcatggggcctggagcccttgtcctgctgctgtccggggccctggccctgac 24707891



 Score =  107 bits (54), Expect = 2e-20
 Identities = 70/74 (94%), Gaps = 1/74 (1%)
 Strand = Plus / Minus

                                                                            
Query: 1839     gagtttcaccttggtgaaattccccctattcaaatctaatacaagcaaaaac-aagtgtt 1897
                |||||||||||||||||||||||||||||||| ||||||| ||||||||||| |||||||
Sbjct: 20392101 gagtttcaccttggtgaaattccccctattcagatctaatgcaagcaaaaacaaagtgtt 20392042

                              
Query: 1898     cactggtttgttac 1911
                || |||||||||||
Sbjct: 20392041 cattggtttgttac 20392028



 Score =  107 bits (54), Expect = 2e-20
 Identities = 54/54 (100%)
 Strand = Plus / Minus

                                                                      
Query: 1094     caggcagtgacagtgcccagggctctgatgtgtccctcaccaaggatcctagag 1147
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24642398 caggcagtgacagtgcccagggctctgatgtgtccctcaccaaggatcctagag 24642345



 Score =  105 bits (53), Expect = 9e-20
 Identities = 89/101 (88%)
 Strand = Plus / Plus

                                                                            
Query: 212      tggacgacacgcagttcgtgcggttcgacagcgacgccccgaatccgcggatggagccgc 271
                ||||||||||||||||||| ||||||  |||||| ||| |||||||  || ||||||| |
Sbjct: 27603284 tggacgacacgcagttcgtacggttcagcagcgatgccgcgaatccaagggtggagcctc 27603343

                                                         
Query: 272      gggcgccgtggatagagcaggaggggcaggagtattgggat 312
                ||||||||||||| ||||||||||||| ||| |||||||||
Sbjct: 27603344 gggcgccgtggatggagcaggaggggcgggaatattgggat 27603384



 Score =  103 bits (52), Expect = 4e-19
 Identities = 74/80 (92%), Gaps = 1/80 (1%)
 Strand = Plus / Minus

                                                                            
Query: 1839     gagtttcaccttggtgaaattccccctattcaaatctaatacaagcaaaaac-aagtgtt 1897
                |||||||||||||||||||||||||||||||| |||||||  |||||||||| |||||||
Sbjct: 80559999 gagtttcaccttggtgaaattccccctattcagatctaatgtaagcaaaaactaagtgtt 80559940

                                    
Query: 1898     cactggtttgttaccagtaa 1917
                || ||||||||||| |||||
Sbjct: 80559939 cattggtttgttacaagtaa 80559920



 Score = 95.6 bits (48), Expect = 9e-17
 Identities = 73/80 (91%), Gaps = 1/80 (1%)
 Strand = Plus / Plus

                                                                            
Query: 1839     gagtttcaccttggtgaaattccccctattcaaatctaatacaagcaaaaac-aagtgtt 1897
                |||||||||||||||||||||||||||||||| ||||||   |||||||||| |||||||
Sbjct: 12278117 gagtttcaccttggtgaaattccccctattcagatctaacgtaagcaaaaacaaagtgtt 12278176

                                    
Query: 1898     cactggtttgttaccagtaa 1917
                || ||||||||||| |||||
Sbjct: 12278177 cattggtttgttacaagtaa 12278196



 Score = 91.7 bits (46), Expect = 1e-15
 Identities = 52/54 (96%)
 Strand = Plus / Plus

                                                                      
Query: 1094     caggcagtgacagtgcccagggctctgatgtgtccctcaccaaggatcctagag 1147
                ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||
Sbjct: 24604434 caggcagtgacagtgcccagggctccgatgtgtcccttaccaaggatcctagag 24604487



 Score = 83.8 bits (42), Expect = 3e-13
 Identities = 51/54 (94%)
 Strand = Plus / Minus

                                                                      
Query: 1094     caggcagtgacagtgcccagggctctgatgtgtccctcaccaaggatcctagag 1147
                ||||||||||||||| ||||||||| ||||||||||| ||||||||||||||||
Sbjct: 24684231 caggcagtgacagtgaccagggctccgatgtgtcccttaccaaggatcctagag 24684178



 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 83/97 (85%)
 Strand = Plus / Minus

                                                                            
Query: 476      acgcctacgacggcgccgattacatcgccctgaacgaggacctgcgctcctggaccgcgg 535
                |||||||||||||||  ||||||||| |  |||||||||||||| | |||||||| || |
Sbjct: 27209855 acgcctacgacggcgaggattacatcactttgaacgaggacctgagttcctggactgcag 27209796

                                                     
Query: 536      cggacacggcggctcagatcaccaagcgcaagtggga 572
                |||||| |||||||| | ||||  |||||||||||||
Sbjct: 27209795 cggacatggcggctcgggtcacacagcgcaagtggga 27209759



 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 83/97 (85%)
 Strand = Plus / Minus

                                                                            
Query: 476      acgcctacgacggcgccgattacatcgccctgaacgaggacctgcgctcctggaccgcgg 535
                |||||||||||||||  ||||||||| |  |||||||||||||| | |||||||| || |
Sbjct: 27629381 acgcctacgacggcgaggattacatcactttgaacgaggacctgagttcctggactgcag 27629322

                                                     
Query: 536      cggacacggcggctcagatcaccaagcgcaagtggga 572
                |||||| |||||||| | ||||  |||||||||||||
Sbjct: 27629321 cggacatggcggctcgggtcacacagcgcaagtggga 27629285



 Score = 79.8 bits (40), Expect = 5e-12
 Identities = 52/56 (92%)
 Strand = Plus / Plus

                                                                        
Query: 479      cctacgacggcgccgattacatcgccctgaacgaggacctgcgctcctggaccgcg 534
                |||||||||||| ||||||||||| |||||| || |||||||||||||||||||||
Sbjct: 27603797 cctacgacggcgacgattacatcgtcctgaatgaagacctgcgctcctggaccgcg 27603852



 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 39/39 (100%)
 Strand = Plus / Plus

                                                       
Query: 1059     ctcaggtgaaaaaggagggagctacactcaggctgcagg 1097
                |||||||||||||||||||||||||||||||||||||||
Sbjct: 24604269 ctcaggtgaaaaaggagggagctacactcaggctgcagg 24604307



 Score = 75.8 bits (38), Expect = 8e-11
 Identities = 50/54 (92%)
 Strand = Plus / Minus

                                                                      
Query: 1094     caggcagtgacagtgcccagggctctgatgtgtccctcaccaaggatcctagag 1147
                ||||||||||||||| ||||||||| ||||||||||| ||||||| ||||||||
Sbjct: 24748733 caggcagtgacagtgaccagggctccgatgtgtcccttaccaagggtcctagag 24748680



 Score = 75.8 bits (38), Expect = 8e-11
 Identities = 50/54 (92%)
 Strand = Plus / Minus

                                                                      
Query: 1094     caggcagtgacagtgcccagggctctgatgtgtccctcaccaaggatcctagag 1147
                ||||||| |||||||||||| |||||| ||||||||||| ||||||||||||||
Sbjct: 26674772 caggcagggacagtgcccagagctctggtgtgtccctcatcaaggatcctagag 26674719



 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 37/37 (100%)
 Strand = Plus / Minus

                                                     
Query: 1061     caggtgaaaaaggagggagctacactcaggctgcagg 1097
                |||||||||||||||||||||||||||||||||||||
Sbjct: 24642561 caggtgaaaaaggagggagctacactcaggctgcagg 24642525



 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 37/37 (100%)
 Strand = Plus / Minus

                                                     
Query: 1061     caggtgaaaaaggagggagctacactcaggctgcagg 1097
                |||||||||||||||||||||||||||||||||||||
Sbjct: 24684394 caggtgaaaaaggagggagctacactcaggctgcagg 24684358



 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 37/37 (100%)
 Strand = Plus / Minus

                                                     
Query: 1061     caggtgaaaaaggagggagctacactcaggctgcagg 1097
                |||||||||||||||||||||||||||||||||||||
Sbjct: 24748893 caggtgaaaaaggagggagctacactcaggctgcagg 24748857



 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 33/33 (100%)
 Strand = Plus / Minus

                                                 
Query: 1094     caggcagtgacagtgcccagggctctgatgtgt 1126
                |||||||||||||||||||||||||||||||||
Sbjct: 24656172 caggcagtgacagtgcccagggctctgatgtgt 24656140



 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 33/33 (100%)
 Strand = Plus / Minus

                                                 
Query: 1094     caggcagtgacagtgcccagggctctgatgtgt 1126
                |||||||||||||||||||||||||||||||||
Sbjct: 24705083 caggcagtgacagtgcccagggctctgatgtgt 24705051



 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 33/33 (100%)
 Strand = Plus / Minus

                                                 
Query: 1065     tgaaaaaggagggagctacactcaggctgcagg 1097
                |||||||||||||||||||||||||||||||||
Sbjct: 26674930 tgaaaaaggagggagctacactcaggctgcagg 26674898



 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 32/32 (100%)
 Strand = Plus / Minus

                                                
Query: 1094     caggcagtgacagtgcccagggctctgatgtg 1125
                ||||||||||||||||||||||||||||||||
Sbjct: 24721300 caggcagtgacagtgcccagggctctgatgtg 24721269



 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 32/32 (100%)
 Strand = Plus / Minus

                                                
Query: 1061     caggtgaaaaaggagggagctacactcaggct 1092
                ||||||||||||||||||||||||||||||||
Sbjct: 24721463 caggtgaaaaaggagggagctacactcaggct 24721432


>gb|GL896105.1| Sus scrofa unplaced genomic scaffold chrU_scaffold479
          Length = 309

 Score =  573 bits (289), Expect = e-160
 Identities = 304/309 (98%)
 Strand = Plus / Plus

                                                                        
Query: 1325 tcaccctgacctgtgttctctttcctgatccactttccagctccaacaggttggggggag 1384
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    tcaccctgacctgtgttctctttcctgatccactttccagctccaacaggttggggggag 60

                                                                        
Query: 1385 gcaggcggcaatggaccatctccatccttatgctaagttcattgccctgactggtgactg 1444
            ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||
Sbjct: 61   gcaggcggcaatggaccatctccatccttatactaaattcattgccctgactggtgactg 120

                                                                        
Query: 1445 cggggagccgaggaaacacaggaggccaaggaagggaactagcctgacggcacagttcca 1504
            ||||||||| |||| |||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 121  cggggagccaaggagacacaggaggccaaggaagggaactagcctgatggcacagttcca 180

                                                                        
Query: 1505 aaggcagggttcctaaccaagggaaaagagcctacccaccggcgcagttccaagggtagg 1564
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181  aaggcagggttcctaaccaagggaaaagagcctacccaccggcgcagttccaagggtagg 240

                                                                        
Query: 1565 tttagaaatagggaaaggggcttacccagtggcacagttccaagggcaagttataaaaat 1624
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241  tttagaaatagggaaaggggcttacccagtggcacagttccaagggcaagttataaaaat 300

                     
Query: 1625 aatgaggct 1633
            |||||||||
Sbjct: 301  aatgaggct 309


>Sscrofa_Chr14 
||          Length = 153851969

 Score =  444 bits (224), Expect = e-122
 Identities = 290/312 (92%)
 Strand = Plus / Minus

                                                                             
Query: 1443      tgcggggagccgaggaaacacaggaggccaaggaagggaactagcctgacggcacagttc 1502
                 |||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 116915238 tgcggggagccgaggagatacaggaggccaaggaagggaactagcctgacggcacagttc 116915179

                                                                             
Query: 1503      caaaggcagggttcctaaccaagggaaaagagcctacccaccggcgcagttccaagggta 1562
                 | |||||||||||||||||| |||  ||| ||||||||||||||| ||||||| |||| |
Sbjct: 116915178 cgaaggcagggttcctaaccgaggagaaaaagcctacccaccggcacagttccgagggca 116915119

                                                                             
Query: 1563      ggtttagaaatagggaaaggggcttacccagtggcacagttccaagggcaagttataaaa 1622
                 |||||||||||||||||| || ||||||  | ||||||||||| |||||||||| |||||
Sbjct: 116915118 ggtttagaaatagggaaaaggacttacctggcggcacagttccgagggcaagttctaaaa 116915059

                                                                             
Query: 1623      ataatgaggctcacctgctaacccgactacaacggcaacaataacaaaacgaaggttttg 1682
                 ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||
Sbjct: 116915058 ataatgaggctcacctgctaacccgacaacaacggcaacaataacaaaatgaaggctttg 116914999

                                                                             
Query: 1683      cacaatagtgcaagaataaaaattgcttcttggaaaattcagtctttcctgttgtttact 1742
                 ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 116914998 cacaatagtgcaagaataaaaattgcttcttggaaaattcagtcttttctgttatttact 116914939

                             
Query: 1743      tattactcagcc 1754
                 ||||||||||||
Sbjct: 116914938 tattactcagcc 116914927



 Score =  313 bits (158), Expect = 2e-82
 Identities = 257/290 (88%)
 Strand = Plus / Plus

                                                                            
Query: 1463     caggaggccaaggaagggaactagcctgacggcacagttccaaaggcagggttcctaacc 1522
                ||||||||| |||||| ||| |||| ||||||||||||||||||||||||||||||||||
Sbjct: 52241982 caggaggccgaggaagagaattagcttgacggcacagttccaaaggcagggttcctaacc 52242041

                                                                            
Query: 1523     aagggaaaagagcctacccaccggcgcagttccaagggtaggtttagaaatagggaaagg 1582
                 ||| |||| ||||||||  ||||| ||||||| |||| ||||||||||||||||||| |
Sbjct: 52242042 gaggaaaaaaagcctacctgccggcacagttccgagggcaggtttagaaatagggaaaag 52242101

                                                                            
Query: 1583     ggcttacccagtggcacagttccaagggcaagttataaaaataatgaggctcacctgcta 1642
                ||||||||  | ||||||||||| |||||||||| | |||| ||||||||||||| ||||
Sbjct: 52242102 ggcttaccaggcggcacagttccgagggcaagttctgaaaacaatgaggctcacccgcta 52242161

                                                                            
Query: 1643     acccgactacaacggcaacaataacaaaacgaaggttttgcacaatagtgcaagaataaa 1702
                ||||||| |||| ||||||||| |||||| ||||| ||||||||| ||||||||||||||
Sbjct: 52242162 acccgacaacaatggcaacaatgacaaaatgaaggctttgcacaacagtgcaagaataaa 52242221

                                                                  
Query: 1703     aattgcttcttggaaaattcagtctttcctgttgtttacttattactcag 1752
                ||| ||||||||| |||  |||||||||||||| |||||||||| |||||
Sbjct: 52242222 aatcgcttcttgggaaaaccagtctttcctgttatttacttattcctcag 52242271



 Score =  305 bits (154), Expect = 5e-80
 Identities = 256/290 (88%)
 Strand = Plus / Minus

                                                                            
Query: 1463     caggaggccaaggaagggaactagcctgacggcacagttccaaaggcagggttcctaacc 1522
                ||||||||| |||||| ||| |||| ||||||||||||||||||||||||||||||||||
Sbjct: 52060637 caggaggccgaggaagagaattagcttgacggcacagttccaaaggcagggttcctaacc 52060578

                                                                            
Query: 1523     aagggaaaagagcctacccaccggcgcagttccaagggtaggtttagaaatagggaaagg 1582
                 ||| |||| ||||||||  ||||| ||||||| |||| ||||||||||||||||||| |
Sbjct: 52060577 gaggaaaaaaagcctacctgccggcacagttccgagggcaggtttagaaatagggaaaag 52060518

                                                                            
Query: 1583     ggcttacccagtggcacagttccaagggcaagttataaaaataatgaggctcacctgcta 1642
                ||||||||  | ||||||||||| |||||||||| | |||| ||||||||||||| ||||
Sbjct: 52060517 ggcttaccaggcggcacagttccgagggcaagttctgaaaacaatgaggctcacccgcta 52060458

                                                                            
Query: 1643     acccgactacaacggcaacaataacaaaacgaaggttttgcacaatagtgcaagaataaa 1702
                ||||||| |||| ||||||||| |||||| ||||| ||||||||| |||| |||||||||
Sbjct: 52060457 acccgacaacaatggcaacaatgacaaaatgaaggctttgcacaacagtgtaagaataaa 52060398

                                                                  
Query: 1703     aattgcttcttggaaaattcagtctttcctgttgtttacttattactcag 1752
                ||| ||||||||| |||  |||||||||||||| |||||||||| |||||
Sbjct: 52060397 aatcgcttcttgggaaaaccagtctttcctgttatttacttattcctcag 52060348



 Score =  283 bits (143), Expect = 2e-73
 Identities = 267/308 (86%), Gaps = 4/308 (1%)
 Strand = Plus / Plus

                                                                             
Query: 1443      tgcggggagccgaggaaacacaggaggccaaggaagggaactagcctgacggcacagttc 1502
                 ||||||||||| |||| |  ||||||||| |||||||||||||||| ||| |||||||||
Sbjct: 127802474 tgcggggagccaaggagatgcaggaggcctaggaagggaactagccggacagcacagttc 127802533

                                                                             
Query: 1503      caaaggcagggttcctaaccaagggaaaagagcctacccaccggcgcagttccaagggta 1562
                   |||||||||||||||||||||| |||| ||||||||  | ||| ||||||| |||| |
Sbjct: 127802534 tgaaggcagggttcctaaccaaggaaaaaaagcctacctgctggcacagttccgagggca 127802593

                                                                             
Query: 1563      ggtttagaaatagggaaaggggcttacccagtggcacagttccaagggcaagttataaaa 1622
                 |||||||||||||||||| |||||||||| | ||||||||||  |||||||| | |||||
Sbjct: 127802594 ggtttagaaatagggaaaagggcttaccctgcggcacagttctgagggcaagctctaaaa 127802653

                                                                             
Query: 1623      ataatgaggctcacctgctaacccgactacaacggcaacaataacaaaacgaaggttttg 1682
                 ||||||||||||||||||||||||||| |||| ||| |||||||||||| ||||| ||||
Sbjct: 127802654 ataatgaggctcacctgctaacccgacaacaatggctacaataacaaaatgaaggctttg 127802713

                                                                             
Query: 1683      cacaatag----tgcaagaataaaaattgcttcttggaaaattcagtctttcctgttgtt 1738
                 ||||| ||    |||||||||||||||   ||||||||||| |||||||||| |||| ||
Sbjct: 127802714 cacaacagtgcatgcaagaataaaaatcatttcttggaaaaatcagtctttcttgttatt 127802773

                         
Query: 1739      tacttatt 1746
                 || |||||
Sbjct: 127802774 taattatt 127802781



 Score =  276 bits (139), Expect = 4e-71
 Identities = 267/307 (86%), Gaps = 2/307 (0%)
 Strand = Plus / Minus

                                                                             
Query: 1441      actgcggggagccgaggaaacacaggaggccaaggaagggaactagcctgacggcacagt 1500
                 |||||||||||||||||| |  ||||||||| |||||||||||||||||||| |||| ||
Sbjct: 153664489 actgcggggagccgaggacatgcaggaggccgaggaagggaactagcctgacagcacggt 153664430

                                                                             
Query: 1501      tccaaaggcagggttcctaaccaagggaaaagagcctacccaccggcgcagttccaaggg 1560
                 |||||||||||||||||| ||| ||| | || ||||||||| | ||| ||||||| ||||
Sbjct: 153664429 tccaaaggcagggttcctcaccgaggaacaa-agcctacccgctggcacagttccgaggg 153664371

                                                                             
Query: 1561      taggtttagaaatagggaaaggggcttacccagtggcacagttccaagggcaagttataa 1620
                  |||||||||||||||| || |||||||||  |  |||||||||| |||||||||| |||
Sbjct: 153664370 caggtttagaaataggggaaagggcttacctggcagcacagttccgagggcaagttctaa 153664311

                                                                             
Query: 1621      aaataatgaggctcacctgctaacccgactacaacggcaacaataacaaaacgaaggttt 1680
                 ||||||||||||||||||||||||||||| |||||  |||||||||||| | ||||| ||
Sbjct: 153664310 aaataatgaggctcacctgctaacccgacaacaacatcaacaataacaagatgaaggctt 153664251

                                                                             
Query: 1681      tgcacaatagtgcaagaataaaaattgcttcttggaaaattcagtctttcctgttgttta 1740
                 ||||||| ||| |||||||||||    ||||| |||||| |||||||||| |||| ||||
Sbjct: 153664250 tgcacaacagtacaagaataaaacca-cttctgggaaaaatcagtctttcttgttattta 153664192

                        
Query: 1741      cttatta 1747
                 |||||||
Sbjct: 153664191 cttatta 153664185



 Score =  276 bits (139), Expect = 4e-71
 Identities = 267/307 (86%), Gaps = 2/307 (0%)
 Strand = Plus / Plus

                                                                             
Query: 1441      actgcggggagccgaggaaacacaggaggccaaggaagggaactagcctgacggcacagt 1500
                 |||||||||||||||||| |  ||||||||| |||||||||||||||||||| |||| ||
Sbjct: 153808065 actgcggggagccgaggacatgcaggaggccgaggaagggaactagcctgacagcacggt 153808124

                                                                             
Query: 1501      tccaaaggcagggttcctaaccaagggaaaagagcctacccaccggcgcagttccaaggg 1560
                 |||||||||||||||||| ||| ||| | || ||||||||| | ||| ||||||| ||||
Sbjct: 153808125 tccaaaggcagggttcctcaccgaggaacaa-agcctacccgctggcacagttccgaggg 153808183

                                                                             
Query: 1561      taggtttagaaatagggaaaggggcttacccagtggcacagttccaagggcaagttataa 1620
                  |||||||||||||||| || |||||||||  |  |||||||||| |||||||||| |||
Sbjct: 153808184 caggtttagaaataggggaaagggcttacctggcagcacagttccgagggcaagttctaa 153808243

                                                                             
Query: 1621      aaataatgaggctcacctgctaacccgactacaacggcaacaataacaaaacgaaggttt 1680
                 ||||||||||||||||||||||||||||| |||||  |||||||||||| | ||||| ||
Sbjct: 153808244 aaataatgaggctcacctgctaacccgacaacaacatcaacaataacaagatgaaggctt 153808303

                                                                             
Query: 1681      tgcacaatagtgcaagaataaaaattgcttcttggaaaattcagtctttcctgttgttta 1740
                 ||||||| ||| |||||||||||    ||||| |||||| |||||||||| |||| ||||
Sbjct: 153808304 tgcacaacagtacaagaataaaacca-cttctgggaaaaatcagtctttcttgttattta 153808362

                        
Query: 1741      cttatta 1747
                 |||||||
Sbjct: 153808363 cttatta 153808369



 Score =  238 bits (120), Expect = 9e-60
 Identities = 248/290 (85%), Gaps = 3/290 (1%)
 Strand = Plus / Minus

                                                                            
Query: 1463     caggaggccaaggaagggaactagcctgacggcacagttccaaaggcagggttcctaacc 1522
                ||||||||| || |||||||||||||||| ||| ||||||| ||||||||||| ||||||
Sbjct: 52073845 caggaggccgagaaagggaactagcctgatggcgcagttccgaaggcagggttactaacc 52073786

                                                                            
Query: 1523     aagggaaaagagcctacccaccggcgcagttccaagggtaggtttagaaatagggaaagg 1582
                |||| |||  ||||||||| | ||| | ||||  |||| ||||||||||||||| ||| |
Sbjct: 52073785 aaggaaaagaagcctacccgctggcacggttctgagggcaggtttagaaataggaaaaag 52073726

                                                                            
Query: 1583     ggcttacccagtggcacagttccaagggcaagttataaaaataatgaggctcacctgcta 1642
                ||||||||  |  |||||||| | |||||||||| |||||| ||||||||||||||||||
Sbjct: 52073725 ggcttacctggcagcacagttacgagggcaagttctaaaaacaatgaggctcacctgcta 52073666

                                                                            
Query: 1643     acccgactacaacggcaacaataacaaaacgaaggttttgcacaatagtgcaagaataaa 1702
                ||| ||| | ||   |||||| ||||||| ||||| ||||||||| |||||||||||| |
Sbjct: 52073665 acctgacaataa---caacaaaaacaaaatgaaggctttgcacaacagtgcaagaataga 52073609

                                                                  
Query: 1703     aattgcttcttggaaaattcagtctttcctgttgtttacttattactcag 1752
                ||| ||||||| ||||||||||||||||||| | ||||||||||| ||||
Sbjct: 52073608 aatcgcttcttagaaaattcagtctttcctgctatttacttattattcag 52073559



 Score =  238 bits (120), Expect = 9e-60
 Identities = 248/290 (85%), Gaps = 3/290 (1%)
 Strand = Plus / Plus

                                                                            
Query: 1463     caggaggccaaggaagggaactagcctgacggcacagttccaaaggcagggttcctaacc 1522
                ||||||||| || |||||||||||||||| ||| ||||||| ||||||||||| ||||||
Sbjct: 52187527 caggaggccgagaaagggaactagcctgatggcgcagttccgaaggcagggttactaacc 52187586

                                                                            
Query: 1523     aagggaaaagagcctacccaccggcgcagttccaagggtaggtttagaaatagggaaagg 1582
                |||| |||  ||||||||| | ||| | ||||  |||| ||||||||||||||| ||| |
Sbjct: 52187587 aaggaaaagaagcctacccgctggcacggttctgagggcaggtttagaaataggaaaaag 52187646

                                                                            
Query: 1583     ggcttacccagtggcacagttccaagggcaagttataaaaataatgaggctcacctgcta 1642
                ||||||||  |  |||||||| | |||||||||| |||||| ||||||||||||||||||
Sbjct: 52187647 ggcttacctggcagcacagttacgagggcaagttctaaaaacaatgaggctcacctgcta 52187706

                                                                            
Query: 1643     acccgactacaacggcaacaataacaaaacgaaggttttgcacaatagtgcaagaataaa 1702
                ||| ||| | ||   |||||| ||||||| ||||| ||||||||| |||||||||||| |
Sbjct: 52187707 acctgacaataa---caacaaaaacaaaatgaaggctttgcacaacagtgcaagaataga 52187763

                                                                  
Query: 1703     aattgcttcttggaaaattcagtctttcctgttgtttacttattactcag 1752
                ||| ||||||| ||||||||||||||||||| | ||||||||||| ||||
Sbjct: 52187764 aatcgcttcttagaaaattcagtctttcctgctatttacttattattcag 52187813



 Score =  103 bits (52), Expect = 4e-19
 Identities = 74/80 (92%), Gaps = 1/80 (1%)
 Strand = Plus / Minus

                                                                             
Query: 1839      gagtttcaccttggtgaaattccccctattcaaatctaatacaagcaaaaac-aagtgtt 1897
                 |||||||||||||||||||||||||||||||| |||||||  |||||||||| |||||||
Sbjct: 116914826 gagtttcaccttggtgaaattccccctattcagatctaatgtaagcaaaaacaaagtgtt 116914767

                                     
Query: 1898      cactggtttgttaccagtaa 1917
                 || ||||||||||| |||||
Sbjct: 116914766 cattggtttgttacgagtaa 116914747



 Score = 95.6 bits (48), Expect = 9e-17
 Identities = 73/80 (91%), Gaps = 1/80 (1%)
 Strand = Plus / Plus

                                                                             
Query: 1839      gagtttcaccttggtgaaattccccctattcaaatctaatacaagcaaaaac-aagtgtt 1897
                 |||||||||||||||||||||||| ||||||| |||||||  |||||||||| |||||||
Sbjct: 127802875 gagtttcaccttggtgaaattccctctattcagatctaatgtaagcaaaaacaaagtgtt 127802934

                                     
Query: 1898      cactggtttgttaccagtaa 1917
                 || ||||||||||| |||||
Sbjct: 127802935 cattggtttgttacaagtaa 127802954



 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 37/38 (97%)
 Strand = Plus / Minus

                                                      
Query: 1841     gtttcaccttggtgaaattccccctattcaaatctaat 1878
                |||||||||||||| |||||||||||||||||||||||
Sbjct: 52073456 gtttcaccttggtggaattccccctattcaaatctaat 52073419



 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 37/38 (97%)
 Strand = Plus / Plus

                                                      
Query: 1841     gtttcaccttggtgaaattccccctattcaaatctaat 1878
                |||||||||||||| |||||||||||||||||||||||
Sbjct: 52187916 gtttcaccttggtggaattccccctattcaaatctaat 52187953


>Sscrofa_Chr13 
||          Length = 218635234

 Score =  438 bits (221), Expect = e-120
 Identities = 291/313 (92%), Gaps = 1/313 (0%)
 Strand = Plus / Minus

                                                                             
Query: 1443      tgcggggagccgaggaaacacaggaggccaaggaagggaactagcctgacggcacagttc 1502
                 |||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 185153321 tgcggggagccgaggagatacaggaggccaaggaagggaactagcctgacggcacagttc 185153262

                                                                             
Query: 1503      caaaggcagggttcctaaccaagggaaaagagcctacccaccggcgcagttccaagggta 1562
                 | |||||||||||||||||| ||| |||| ||||||||||| ||| ||||||| |||| |
Sbjct: 185153261 cgaaggcagggttcctaaccgaggaaaaaaagcctacccactggcacagttccgagggca 185153202

                                                                             
Query: 1563      ggtttagaaatagggaaaggggcttacccagtggcacagttccaagggcaagttataaaa 1622
                  |||||||||||||||||  | ||||||||||||||||||||| |||||||||| |||||
Sbjct: 185153201 agtttagaaatagggaaaaagacttacccagtggcacagttccgagggcaagttctaaaa 185153142

                                                                             
Query: 1623      ataatgaggctcacctgctaacccgactacaacggcaacaataac-aaaacgaaggtttt 1681
                 ||||||||||||||||||||||| ||| |||||||| |||||||| |||| |||||||||
Sbjct: 185153141 ataatgaggctcacctgctaacctgacaacaacggctacaataacaaaaatgaaggtttt 185153082

                                                                             
Query: 1682      gcacaatagtgcaagaataaaaattgcttcttggaaaattcagtctttcctgttgtttac 1741
                 |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 185153081 gcacaatagtgcaagaataaaaattgcttcttggaaaattcagtctttcctgttatttac 185153022

                              
Query: 1742      ttattactcagcc 1754
                 |||||||||||||
Sbjct: 185153021 ttattactcagcc 185153009



 Score =  353 bits (178), Expect = 2e-94
 Identities = 266/294 (90%), Gaps = 1/294 (0%)
 Strand = Plus / Plus

                                                                             
Query: 1462      acaggaggccaaggaagggaactagcctgacggcacagttccaaaggcagggttcctaac 1521
                 |||||||||||||||||||||||||||||| ||||||||||  |||||||||||||||||
Sbjct: 118134497 acaggaggccaaggaagggaactagcctgatggcacagttctgaaggcagggttcctaac 118134556

                                                                             
Query: 1522      caagggaaaagagcctacccaccggcgcagttccaagggtaggtttagaaatagggaaag 1581
                   ||| |||| ||||||||| |||||  |||||| |||| ||||||| ||||||||||||
Sbjct: 118134557 tgaggaaaaaaagcctacccgccggcatagttccgagggcaggtttaaaaatagggaaag 118134616

                                                                             
Query: 1582      ggg-cttacccagtggcacagttccaagggcaagttataaaaataatgaggctcacctgc 1640
                 ||| ||||||  | ||||||||||| |||||||||| |||||||||||||||||||||||
Sbjct: 118134617 ggggcttacctggcggcacagttccgagggcaagttctaaaaataatgaggctcacctgc 118134676

                                                                             
Query: 1641      taacccgactacaacggcaacaataacaaaacgaaggttttgcacaatagtgcaagaata 1700
                 ||||| ||| ||||||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 118134677 taacctgacaacaacggcaacaataacaaaatgaaggctttgcacaatagtgcaagaata 118134736

                                                                       
Query: 1701      aaaattgcttcttggaaaattcagtctttcctgttgtttacttattactcagcc 1754
                 |||||| |||||||||||||||| ||||||||||| ||||||| ||| ||||||
Sbjct: 118134737 aaaattacttcttggaaaattcactctttcctgttatttacttgttattcagcc 118134790



 Score =  341 bits (172), Expect = 9e-91
 Identities = 256/284 (90%)
 Strand = Plus / Plus

                                                                            
Query: 1452     ccgaggaaacacaggaggccaaggaagggaactagcctgacggcacagttccaaaggcag 1511
                ||||||| | |||||||||||||||||||||  ||||||||||||||||||| |||||||
Sbjct: 55298994 ccgaggagatacaggaggccaaggaagggaaacagcctgacggcacagttccgaaggcag 55299053

                                                                            
Query: 1512     ggttcctaaccaagggaaaagagcctacccaccggcgcagttccaagggtaggtttagaa 1571
                ||||||||||||||| |||| |||||||| |||||| |||||||||||  ||||||||| 
Sbjct: 55299054 ggttcctaaccaaggaaaaaaagcctacctaccggcacagttccaaggacaggtttagat 55299113

                                                                            
Query: 1572     atagggaaaggggcttacccagtggcacagttccaagggcaagttataaaaataatgagg 1631
                ||||||||| || |||||||||  |||||||||| |||||||||| ||||||||||||||
Sbjct: 55299114 atagggaaaaggacttacccagaagcacagttccgagggcaagttctaaaaataatgagg 55299173

                                                                            
Query: 1632     ctcacctgctaacccgactacaacggcaacaataacaaaacgaaggttttgcacaatagt 1691
                |||||||||||| ||||| ||| | |||||| |||||||| ||||| ||||||||| |||
Sbjct: 55299174 ctcacctgctaatccgacaacagcagcaacagtaacaaaatgaaggctttgcacaacagt 55299233

                                                            
Query: 1692     gcaagaataaaaattgcttcttggaaaattcagtctttcctgtt 1735
                ||||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 55299234 gcaagaataaaaattgccttttggaaaattcagtctttcctgtt 55299277



 Score =  337 bits (170), Expect = 1e-89
 Identities = 275/310 (88%)
 Strand = Plus / Plus

                                                                            
Query: 1443     tgcggggagccgaggaaacacaggaggccaaggaagggaactagcctgacggcacagttc 1502
                |||||||||||||||| |  ||||||||| |||| |||||||||||||| ||||||||||
Sbjct: 61831738 tgcggggagccgaggagatgcaggaggccgaggaggggaactagcctgatggcacagttc 61831797

                                                                            
Query: 1503     caaaggcagggttcctaaccaagggaaaagagcctacccaccggcgcagttccaagggta 1562
                  |||||||||||||||||| ||| || | | |||||||   ||| ||||||| |||| |
Sbjct: 61831798 tgaaggcagggttcctaaccgaggaaacaaaacctacccggtggcacagttcccagggca 61831857

                                                                            
Query: 1563     ggtttagaaatagggaaaggggcttacccagtggcacagttccaagggcaagttataaaa 1622
                |||||||||||||||||| |||||||||| ||||||||||||| |||||||||| |||||
Sbjct: 61831858 ggtttagaaatagggaaaagggcttacccggtggcacagttccgagggcaagttctaaaa 61831917

                                                                            
Query: 1623     ataatgaggctcacctgctaacccgactacaacggcaacaataacaaaacgaaggttttg 1682
                | ||||||||||||||||||||| ||| |||| || |||||||| |||| ||||| ||||
Sbjct: 61831918 acaatgaggctcacctgctaacctgacaacaatggtaacaataaaaaaatgaaggctttg 61831977

                                                                            
Query: 1683     cacaatagtgcaagaataaaaattgcttcttggaaaattcagtctttcctgttgtttact 1742
                |||||||| |||||||||||||| ||||||||||||| ||||||||||||||||||||||
Sbjct: 61831978 cacaatagcgcaagaataaaaatcgcttcttggaaaaatcagtctttcctgttgtttact 61832037

                          
Query: 1743     tattactcag 1752
                ||||| ||||
Sbjct: 61832038 tattattcag 61832047



 Score =  331 bits (167), Expect = 8e-88
 Identities = 270/303 (89%), Gaps = 1/303 (0%)
 Strand = Plus / Minus

                                                                             
Query: 1443      tgcggggagccgaggaaacacaggaggccaaggaagggaactagcctgacggcacagttc 1502
                 ||||||||||| |||| | ||||||| |||||||||||||||||||||| ||||||||||
Sbjct: 171962096 tgcggggagccaaggagatacaggagaccaaggaagggaactagcctgatggcacagttc 171962037

                                                                             
Query: 1503      caaaggcagggttcctaaccaagggaaaagagcctacccaccggcgcagttccaagggta 1562
                 | |||||||||||||||||| ||| |||| ||| ||||||||||| ||||||  |||| |
Sbjct: 171962036 cgaaggcagggttcctaacctaggaaaaaaagcatacccaccggcacagttctgagggca 171961977

                                                                             
Query: 1563      ggtttagaaatagggaaaggggcttacccagtggcacagttccaagggcaagttataaaa 1622
                 |||||||||||||||||| || ||||||| ||||||||||||  |||||||| | |||||
Sbjct: 171961976 ggtttagaaatagggaaaaggacttacccggtggcacagttctgagggcaag-tctaaaa 171961918

                                                                             
Query: 1623      ataatgaggctcacctgctaacccgactacaacggcaacaataacaaaacgaaggttttg 1682
                 | || ||||||||||||||| || ||| |||  |||||||||||||||| ||||| ||||
Sbjct: 171961917 acaaggaggctcacctgctatcctgacaacagtggcaacaataacaaaatgaaggctttg 171961858

                                                                             
Query: 1683      cacaatagtgcaagaataaaaattgcttcttggaaaattcagtctttcctgttgtttact 1742
                 |||||||||||||||||||||||||||| |||||||||||||||||||||||| | ||||
Sbjct: 171961857 cacaatagtgcaagaataaaaattgctttttggaaaattcagtctttcctgttatgtact 171961798

                    
Query: 1743      tat 1745
                 |||
Sbjct: 171961797 tat 171961795



 Score =  305 bits (154), Expect = 5e-80
 Identities = 267/302 (88%), Gaps = 2/302 (0%)
 Strand = Plus / Minus

                                                                          
Query: 1446   ggggagccgaggaaacacaggaggccaaggaagggaactagcctgacggcacagttccaa 1505
              ||||||||||||| |  |||| ||||||||||||||||||||||||||| ||||||||||
Sbjct: 710766 ggggagccgaggagatgcagggggccaaggaagggaactagcctgacggaacagttccaa 710707

                                                                          
Query: 1506   aggcagggttcctaaccaagggaaaagagcctacccaccggcgcagttccaagggtaggt 1565
              ||||||||||||||||| ||| |||| ||||||||||  ||| |||||||||||  ||||
Sbjct: 710706 aggcagggttcctaaccgaggaaaaaaagcctacccagtggcacagttccaaggacaggt 710647

                                                                          
Query: 1566   ttagaaatagggaaaggggcttacccagtggcacagttccaagggcaagttataaaaata 1625
              ||||||||||||||| |||||||||  | |||| |||||| ||||| |||| ||||||||
Sbjct: 710646 ttagaaatagggaaaagggcttacctggcggcatagttccgagggc-agttctaaaaata 710588

                                                                          
Query: 1626   atgaggctcacctgctaacccgactacaacggcaacaataacaaaacgaaggttttgcac 1685
              |||||| ||||||||||||||||  |||| |||||||||||||||| ||||| |||||||
Sbjct: 710587 atgagggtcacctgctaacccgataacaatggcaacaataacaaaatgaaggctttgcac 710528

                                                                          
Query: 1686   aatagtgcaagaataaaaattgcttcttggaaaattcagtctttcctgttgtttacttat 1745
              |||||||||||||| ||||| |||  |||||||| |||||||||| || | |||||||||
Sbjct: 710527 aatagtgcaagaat-aaaatcgctctttggaaaaatcagtctttcttgctatttacttat 710469

                
Query: 1746   ta 1747
              ||
Sbjct: 710468 ta 710467



 Score =  293 bits (148), Expect = 2e-76
 Identities = 263/300 (87%), Gaps = 1/300 (0%)
 Strand = Plus / Minus

                                                                             
Query: 1446      ggggagccgaggaaacacaggaggccaaggaagggaactagcctgacggcacagttccaa 1505
                 |||||||| |||| | ||||||| ||||||||||||| |||||||| ||||||||||| |
Sbjct: 172394277 ggggagccaaggagatacaggagaccaaggaagggaattagcctgatggcacagttccga 172394218

                                                                             
Query: 1506      aggcagggttcctaaccaagggaaaagagcctacccaccggcgcagttccaagggtaggt 1565
                 ||||||||||||||||| ||| |||| ||||||||  || || ||||||| | |  ||||
Sbjct: 172394217 aggcagggttcctaacctaggaaaaaaagcctacctgccagcacagttccgaagacaggt 172394158

                                                                             
Query: 1566      ttagaaatagggaaaggggcttacccagtggcacagttccaagggcaagttataaaaata 1625
                 ||||||||||||||| || ||||||| ||||||||||||  |||||||||  |||||| |
Sbjct: 172394157 ttagaaatagggaaaaggacttacccggtggcacagttctgagggcaagtc-taaaaaca 172394099

                                                                             
Query: 1626      atgaggctcacctgctaacccgactacaacggcaacaataacaaaacgaaggttttgcac 1685
                 | ||||||||||||||| || ||| |||  |||||||||||||||| ||||| |||||||
Sbjct: 172394098 aggaggctcacctgctatcctgacaacagtggcaacaataacaaaatgaaggctttgcac 172394039

                                                                             
Query: 1686      aatagtgcaagaataaaaattgcttcttggaaaattcagtctttcctgttgtttacttat 1745
                 ||||||||||||||||||||||||| |||||||||||||||||||||||| | |||||||
Sbjct: 172394038 aatagtgcaagaataaaaattgctttttggaaaattcagtctttcctgttatgtacttat 172393979



 Score =  268 bits (135), Expect = 1e-68
 Identities = 216/241 (89%), Gaps = 4/241 (1%)
 Strand = Plus / Plus

                                                                             
Query: 1514      ttcctaaccaagggaaaagagcctacccaccggcgcagttccaagggtaggtttagaaat 1573
                 ||||||||| ||| |||| ||||||||| ||||| ||||||| |||| ||||||||||||
Sbjct: 189081380 ttcctaaccgaggaaaaaaagcctacccgccggcacagttccgagggcaggtttagaaat 189081439

                                                                             
Query: 1574      agggaaaggggcttacccagtggcacagttccaagggcaagttataaaaataatgaggct 1633
                 |||| || |||||||||| ||||||||||||  |||||||||| ||||||||||||||||
Sbjct: 189081440 agggcaaagggcttacccggtggcacagttctgagggcaagttctaaaaataatgaggct 189081499

                                                                             
Query: 1634      cacctgctaacccgactacaacggcaacaataacaaaacgaaggttttgcacaatagtgc 1693
                 |||||||||||||||| ||||||   ||||||| |||| ||||| |||| ||||||||||
Sbjct: 189081500 cacctgctaacccgacaacaacg---acaataataaaatgaaggctttgtacaatagtgc 189081556

                                                                             
Query: 1694      aagaataaaaattgcttcttggaaaattcagtctttcctgttgtttacttattactcagc 1753
                 ||||||||||| ||||||||||| |||||||||||| ||||| |||||||||||||||||
Sbjct: 189081557 aagaataaaaaatgcttcttggagaattcagtcttt-ctgttatttacttattactcagc 189081615

                  
Query: 1754      c 1754
                 |
Sbjct: 189081616 c 189081616



 Score =  240 bits (121), Expect = 2e-60
 Identities = 160/173 (92%)
 Strand = Plus / Minus

                                                                             
Query: 1580      aggggcttacccagtggcacagttccaagggcaagttataaaaataatgaggctcacctg 1639
                 |||||||||||| ||||||||||||  |||||||||| ||||| ||||||||||||||||
Sbjct: 137802636 aggggcttacccggtggcacagttctgagggcaagttctaaaattaatgaggctcacctg 137802577

                                                                             
Query: 1640      ctaacccgactacaacggcaacaataacaaaacgaaggttttgcacaatagtgcaagaat 1699
                 |||||| ||| ||||||||||||||| ||||| ||||||||||||||||| |||||||||
Sbjct: 137802576 ctaacctgacaacaacggcaacaatagcaaaatgaaggttttgcacaataatgcaagaat 137802517

                                                                      
Query: 1700      aaaaattgcttcttggaaaattcagtctttcctgttgtttacttattactcag 1752
                 |||||||||||||||||| ||||||||||||||||| ||||||||||| ||||
Sbjct: 137802516 aaaaattgcttcttggaatattcagtctttcctgttatttacttattattcag 137802464



 Score =  220 bits (111), Expect = 2e-54
 Identities = 169/187 (90%), Gaps = 1/187 (0%)
 Strand = Plus / Plus

                                                                             
Query: 1562      aggtttagaaatagggaaag-gggcttacccagtggcacagttccaagggcaagttataa 1620
                 ||||||||||| |||||||  |||||||||  ||||||||||||| |||||||||| |||
Sbjct: 162985258 aggtttagaaacagggaaaaagggcttacctggtggcacagttccgagggcaagttctaa 162985317

                                                                             
Query: 1621      aaataatgaggctcacctgctaacccgactacaacggcaacaataacaaaacgaaggttt 1680
                 || |||||||||||||||||||||||||| |||| |||||||||||||||| ||||  ||
Sbjct: 162985318 aactaatgaggctcacctgctaacccgacaacaatggcaacaataacaaaatgaagcctt 162985377

                                                                             
Query: 1681      tgcacaatagtgcaagaataaaaattgcttcttggaaaattcagtctttcctgttgttta 1740
                 ||||||| |||||||||||| |||| ||||||||||||| ||||||||||||||| ||||
Sbjct: 162985378 tgcacaacagtgcaagaatagaaatcgcttcttggaaaaatcagtctttcctgttattta 162985437

                        
Query: 1741      cttatta 1747
                 |||||||
Sbjct: 162985438 cttatta 162985444



 Score =  198 bits (100), Expect = 8e-48
 Identities = 256/311 (82%), Gaps = 14/311 (4%)
 Strand = Plus / Minus

                                                                             
Query: 1442      ctgcggggagccgaggaaacacaggaggccaaggaagggaactagcctgacggcacagtt 1501
                 ||||||||||| ||||| |  |||||||||||||||||||||||| |||  |||||| ||
Sbjct: 161489696 ctgcggggagctgaggagatgcaggaggccaaggaagggaactagtctgttggcacaatt 161489637

                                                                             
Query: 1502      ccaaaggcagggttcctaaccaagggaaaagagcctacccaccggcgcagttccaagggt 1561
                  |||||||||||||||||||| ||| |||| ||||||||                |||| 
Sbjct: 161489636 tcaaaggcagggttcctaaccgaggaaaaaaagcctacctg--------------agggc 161489591

                                                                             
Query: 1562      aggtttagaaatagggaaaggggcttacccagtggcacagttccaagggcaagttataaa 1621
                 ||||||||||| ||||| | ||||||||   |   ||||||||  |||||||||| ||||
Sbjct: 161489590 aggtttagaaacagggagaagggcttacatggccacacagttctgagggcaagttctaaa 161489531

                                                                             
Query: 1622      aataatgaggctcacctgctaacccgactacaacggcaacaataacaaaacgaaggtttt 1681
                 || |||||||||||||||||||||| || |||| |||||||| ||||||| ||| | |||
Sbjct: 161489530 aacaatgaggctcacctgctaacccaacaacaatggcaacaaaaacaaaatgaatgcttt 161489471

                                                                             
Query: 1682      gcacaatagtgcaagaataaaaattgcttcttggaaaattcagtctttcctgttgtttac 1741
                 | |||| ||||||||||||||||| ||||||||||||| ||||||||||||||| |||||
Sbjct: 161489470 gtacaacagtgcaagaataaaaatcgcttcttggaaaaatcagtctttcctgttatttac 161489411

                            
Query: 1742      ttattactcag 1752
                 |||||| ||||
Sbjct: 161489410 ttattattcag 161489400



 Score =  143 bits (72), Expect = 4e-31
 Identities = 121/136 (88%), Gaps = 1/136 (0%)
 Strand = Plus / Minus

                                                                             
Query: 1446      ggggagccgaggaaacacaggaggccaaggaagggaactagcctgacggcacagttccaa 1505
                 ||||||||||||| | | ||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 137803042 ggggagccgaggagataaaggaggccaaggaagggaactagcctgacagcacagttccaa 137802983

                                                                             
Query: 1506      aggcagggttcctaaccaagg-gaaaagagcctacccaccggcgcagttccaagggtagg 1564
                 |||||||||||||||||||||  |||| ||||||||| ||||  ||||||| | |  |||
Sbjct: 137802982 aggcagggttcctaaccaaggaaaaaaaagcctacccgccggtacagttccgaagccagg 137802923

                                 
Query: 1565      tttagaaatagggaaa 1580
                 |||| |||||||||||
Sbjct: 137802922 tttaaaaatagggaaa 137802907



 Score =  133 bits (67), Expect = 4e-28
 Identities = 116/131 (88%), Gaps = 1/131 (0%)
 Strand = Plus / Plus

                                                                            
Query: 1617     ataaaaataatgaggctcacctgctaacccgactacaacggcaacaataacaaaacgaag 1676
                ||||||| ||||| ||||||| ||||| ||||| ||||| ||||||||||||||| ||||
Sbjct: 53897141 ataaaaacaatgaagctcacccgctaagccgacaacaacagcaacaataacaaaatgaag 53897200

                                                                            
Query: 1677     gttttgcacaatagtgcaagaataaaaattgcttcttggaaaattcagtctttcctgttg 1736
                | ||||||||| ||||||||||| |||||  |||||||||||| |||||||||| |||| 
Sbjct: 53897201 gctttgcacaacagtgcaagaat-aaaatcacttcttggaaaaatcagtctttcttgtta 53897259

                           
Query: 1737     tttacttatta 1747
                |||||||||||
Sbjct: 53897260 tttacttatta 53897270



 Score =  115 bits (58), Expect = 9e-23
 Identities = 77/82 (93%), Gaps = 1/82 (1%)
 Strand = Plus / Minus

                                                                             
Query: 1839      gagtttcaccttggtgaaattccccctattcaaatctaatacaagcaaaaac-aagtgtt 1897
                 ||||||||||||||||||||||| |||||||| ||||||||||||||||||| |||||||
Sbjct: 185152921 gagtttcaccttggtgaaattcctcctattcagatctaatacaagcaaaaacaaagtgtt 185152862

                                       
Query: 1898      cactggtttgttaccagtaaaa 1919
                 || ||||||||||| |||||||
Sbjct: 185152861 cattggtttgttacaagtaaaa 185152840



 Score =  111 bits (56), Expect = 1e-21
 Identities = 86/96 (89%)
 Strand = Plus / Plus

                                                                            
Query: 1446     ggggagccgaggaaacacaggaggccaaggaagggaactagcctgacggcacagttccaa 1505
                ||||||| ||||| |  ||||||||| |||||||||||||||||||| ||||||||||||
Sbjct: 53896552 ggggagctgaggagatgcaggaggccgaggaagggaactagcctgactgcacagttccaa 53896611

                                                    
Query: 1506     aggcagggttcctaaccaagggaaaagagcctaccc 1541
                ||||||||||||||||  ||| |||| |||||||||
Sbjct: 53896612 aggcagggttcctaacataggaaaaaaagcctaccc 53896647



 Score =  105 bits (53), Expect = 9e-20
 Identities = 78/85 (91%), Gaps = 1/85 (1%)
 Strand = Plus / Plus

                                                                             
Query: 1836      aatgagtttcaccttggtgaaattccccctattcaaatctaatacaagcaaaaac-aagt 1894
                 |||||||||||||||||||||||||| |||||||| |||||||  |||||||||| ||||
Sbjct: 118134886 aatgagtttcaccttggtgaaattcctcctattcagatctaatgtaagcaaaaacaaagt 118134945

                                          
Query: 1895      gttcactggtttgttaccagtaaaa 1919
                 ||||| ||||||||||| |||||||
Sbjct: 118134946 gttcattggtttgttacaagtaaaa 118134970



 Score =  103 bits (52), Expect = 4e-19
 Identities = 74/80 (92%), Gaps = 1/80 (1%)
 Strand = Plus / Plus

                                                                             
Query: 1839      gagtttcaccttggtgaaattccccctattcaaatctaatacaagcaaaaac-aagtgtt 1897
                 ||||||||||||||||||||||||||| |||| ||||||| ||||||||||| |||||||
Sbjct: 189081714 gagtttcaccttggtgaaattcccccttttcagatctaatgcaagcaaaaacaaagtgtt 189081773

                                     
Query: 1898      cactggtttgttaccagtaa 1917
                 || ||||||||||| |||||
Sbjct: 189081774 cattggtttgttacaagtaa 189081793



 Score = 99.6 bits (50), Expect = 6e-18
 Identities = 72/78 (92%), Gaps = 1/78 (1%)
 Strand = Plus / Minus

                                                                             
Query: 1841      gtttcaccttggtgaaattccccctattcaaatctaatacaagcaaaaac-aagtgttca 1899
                 |||||||||||||||||||||||||||||| |||||||  |||||||||| |||||||||
Sbjct: 171961683 gtttcaccttggtgaaattccccctattcagatctaatggaagcaaaaacaaagtgttca 171961624

                                   
Query: 1900      ctggtttgttaccagtaa 1917
                 ||| |||||||| |||||
Sbjct: 171961623 ctgttttgttacaagtaa 171961606



 Score = 95.6 bits (48), Expect = 9e-17
 Identities = 73/80 (91%), Gaps = 1/80 (1%)
 Strand = Plus / Minus

                                                                             
Query: 1839      gagtttcaccttggtgaaattccccctattcaaatctaatacaagcaaaaac-aagtgtt 1897
                 |||||||||||||||||||||||||||||||| |||||||  |||||||||| |||||||
Sbjct: 172393869 gagtttcaccttggtgaaattccccctattcagatctaatggaagcaaaaacaaagtgtt 172393810

                                     
Query: 1898      cactggtttgttaccagtaa 1917
                 ||| | |||||||| |||||
Sbjct: 172393809 cacagttttgttacaagtaa 172393790



 Score = 83.8 bits (42), Expect = 3e-13
 Identities = 67/74 (90%), Gaps = 1/74 (1%)
 Strand = Plus / Plus

                                                                            
Query: 1839     gagtttcaccttggtgaaattccccctattcaaatctaatacaagcaaaaac-aagtgtt 1897
                |||||||||||| |||||||||||| |||||| |||||||  |||||||||| |||||||
Sbjct: 55299371 gagtttcaccttagtgaaattccccttattcagatctaatgtaagcaaaaacaaagtgtt 55299430

                              
Query: 1898     cactggtttgttac 1911
                || |||||||||||
Sbjct: 55299431 cattggtttgttac 55299444



 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 71/81 (87%), Gaps = 2/81 (2%)
 Strand = Plus / Minus

                                                                             
Query: 1839      gagtttcaccttggtgaaattccccctattcaaatctaatacaa-gcaaaaac-aagtgt 1896
                 ||||||| || ||||||||| ||||||||||| |||||||  || |||||||| ||||||
Sbjct: 137802362 gagtttcgccctggtgaaatcccccctattcagatctaatgtaatgcaaaaacaaagtgt 137802303

                                      
Query: 1897      tcactggtttgttaccagtaa 1917
                 ||| ||||||||||| |||||
Sbjct: 137802302 tcattggtttgttacaagtaa 137802282


>Sscrofa_Chr04 
||          Length = 143465943

 Score =  438 bits (221), Expect = e-120
 Identities = 287/309 (92%)
 Strand = Plus / Minus

                                                                            
Query: 1446     ggggagccgaggaaacacaggaggccaaggaagggaactagcctgacggcacagttccaa 1505
                ||||||| ||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 88901442 ggggagcagaggagatacaggaggccaaggaagggaactagcctgacggcacagttccaa 88901383

                                                                            
Query: 1506     aggcagggttcctaaccaagggaaaagagcctacccaccggcgcagttccaagggtaggt 1565
                |||||||||||||| ||||||  ||| ||||||||| ||||| ||||||| |||| ||||
Sbjct: 88901382 aggcagggttcctagccaaggagaaaaagcctacccgccggcacagttccgagggcaggt 88901323

                                                                            
Query: 1566     ttagaaatagggaaaggggcttacccagtggcacagttccaagggcaagttataaaaata 1625
                ||||||||||||||| |||||||||||| ||||||||||||||||||||||  |||||||
Sbjct: 88901322 ttagaaatagggaaaagggcttacccagcggcacagttccaagggcaagttcgaaaaata 88901263

                                                                            
Query: 1626     atgaggctcacctgctaacccgactacaacggcaacaataacaaaacgaaggttttgcac 1685
                ||||||||||||||||| |||||| |||||| ||||||||| |||| ||||| |||||||
Sbjct: 88901262 atgaggctcacctgctatcccgacaacaacgacaacaataataaaatgaaggctttgcac 88901203

                                                                            
Query: 1686     aatagtgcaagaataaaaattgcttcttggaaaattcagtctttcctgttgtttacttat 1745
                |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 88901202 aatagtgcaagaataaaaattgcttcttggaaaattcagtctttcctgttatttacttat 88901143

                         
Query: 1746     tactcagcc 1754
                |||||||||
Sbjct: 88901142 tactcagcc 88901134



 Score =  375 bits (189), Expect = e-101
 Identities = 279/308 (90%), Gaps = 2/308 (0%)
 Strand = Plus / Plus

                                                                             
Query: 1442      ctgcggggagccgaggaaacacaggagg--ccaaggaagggaactagcctgacggcacag 1499
                 ||||||||||||||||| | ||||||||  |||| ||||||||||||||||| |||||||
Sbjct: 105103159 ctgcggggagccgaggagatacaggaggagccaacgaagggaactagcctgatggcacag 105103218

                                                                             
Query: 1500      ttccaaaggcagggttcctaaccaagggaaaagagcctacccaccggcgcagttccaagg 1559
                 || | |||||||||||||||||  |||||||| |||||||||   ||| ||||||| |||
Sbjct: 105103219 ttgcgaaggcagggttcctaactgagggaaaaaagcctacccgtaggcacagttccgagg 105103278

                                                                             
Query: 1560      gtaggtttagaaatagggaaaggggcttacccagtggcacagttccaagggcaagttata 1619
                 | ||||||||||||||||||| || ||||||| ||||||||||||||||||||||||  |
Sbjct: 105103279 gcaggtttagaaatagggaaaaggacttacccggtggcacagttccaagggcaagttcca 105103338

                                                                             
Query: 1620      aaaataatgaggctcacctgctaacccgactacaacggcaacaataacaaaacgaaggtt 1679
                 |||||||||||||||||||||||| ||||| |||| |||||||||||||||| || || |
Sbjct: 105103339 aaaataatgaggctcacctgctaagccgacaacaatggcaacaataacaaaatgatggct 105103398

                                                                             
Query: 1680      ttgcacaatagtgcaagaataaaaattgcttcttggaaaattcagtctttcctgttgttt 1739
                 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 105103399 ttgcacaatagtgcaagaataaaaattgcttcttggaaaattcagtctttcctgttattt 105103458

                         
Query: 1740      acttatta 1747
                 ||||||||
Sbjct: 105103459 acttatta 105103466



 Score =  375 bits (189), Expect = e-101
 Identities = 278/306 (90%), Gaps = 5/306 (1%)
 Strand = Plus / Plus

                                                                             
Query: 1447      gggagccgaggaaacacaggaggccaaggaagggaactagcctgacggcacagttccaaa 1506
                 |||||||||||| | |||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 123794544 gggagccgaggagatacaggaggccaaggaagggaactagcctgacggcactgttcctaa 123794603

                                                                             
Query: 1507      ggcagggttcctaaccaagggaaaaga--gcctacccaccggcgcagttccaagggtagg 1564
                 |||||| ||||||||||| | |||| |  | |||||| | ||| |||||||||||| | |
Sbjct: 123794604 ggcaggtttcctaaccaaagaaaaaaaaagtctacccgctggcacagttccaagggcaag 123794663

                                                                             
Query: 1565      tttagaaatagggaaaggggcttacccagtggc---acagttccaagggcaagttataaa 1621
                 |||||||||||||||| ||||||||||||||||   |||||||  |||||||||| ||||
Sbjct: 123794664 tttagaaatagggaaaagggcttacccagtggcggcacagttctgagggcaagttctaaa 123794723

                                                                             
Query: 1622      aataatgaggctcacctgctaacccgactacaacggcaacaataacaaaacgaaggtttt 1681
                 |||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| |||
Sbjct: 123794724 aataatgaggctcacctgctaacccgacaacaacggcaacaataacaaaatgaaggcttt 123794783

                                                                             
Query: 1682      gcacaatagtgcaagaataaaaattgcttcttggaaaattcagtctttcctgttgtttac 1741
                 | |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 123794784 gtacaatagtgcaagaataaaaattgcttcttggaaaattcagtctttcctgttatttac 123794843

                       
Query: 1742      ttatta 1747
                 ||||||
Sbjct: 123794844 ttatta 123794849



 Score =  315 bits (159), Expect = 5e-83
 Identities = 280/316 (88%), Gaps = 7/316 (2%)
 Strand = Plus / Minus

                                                                            
Query: 1443     tgcggggagccgaggaaacacaggaggccaaggaagggaactagcctgacgg-cacagtt 1501
                |||||||||||||||| | |||||||||  |||||||||||||||||||||| |||||||
Sbjct: 54831329 tgcggggagccgaggagatacaggaggctgaggaagggaactagcctgacgggcacagtt 54831270

                                                                            
Query: 1502     ccaaaggcagggttcctaaccaagggaaaagagcctacccaccggcgcagttccaagggt 1561
                || ||||||||||||||| |  |||||||| ||||||||| ||||| ||||||  |||| 
Sbjct: 54831269 ccgaaggcagggttccta-ctgagggaaaaaagcctacccgccggcacagttcagagggc 54831211

                                                                            
Query: 1562     aggtttagaaatagggaaaggggcttacccagtgg----cacagttccaagggcaagtta 1617
                |||| ||||||||||||| ||||||||||||| ||    ||||||||| |||||||||| 
Sbjct: 54831210 aggtatagaaatagggaatggggcttacccagcgggcggcacagttccgagggcaagttc 54831151

                                                                            
Query: 1618     taaaaataatgaggctcacctgctaacccgactacaacggcaacaataacaaaacgaagg 1677
                |||||||||||||||||||||||||||| |||  ||| ||| |||||||||||| |||||
Sbjct: 54831150 taaaaataatgaggctcacctgctaacctgacagcaatggctacaataacaaaatgaagg 54831091

                                                                            
Query: 1678     -ttttgcacaatagtgcaagaataaaaattgcttcttggaaaattcagtctttcctgttg 1736
                 |||||||||| ||||||||||||||||| ||||||||||||| ||||||||||||||| 
Sbjct: 54831090 cttttgcacaacagtgcaagaataaaaatcgcttcttggaaaaatcagtctttcctgtta 54831031

                                
Query: 1737     tttacttattactcag 1752
                ||||||||||| ||||
Sbjct: 54831030 tttacttattattcag 54831015



 Score =  111 bits (56), Expect = 1e-21
 Identities = 75/80 (93%), Gaps = 1/80 (1%)
 Strand = Plus / Plus

                                                                             
Query: 1839      gagtttcaccttggtgaaattccccctattcaaatctaatacaagcaaaaac-aagtgtt 1897
                 |||||||||||||||||||||||||||||||| ||||||| ||||||||||| |||||||
Sbjct: 105103574 gagtttcaccttggtgaaattccccctattcagatctaatgcaagcaaaaacaaagtgtt 105103633

                                     
Query: 1898      cactggtttgttaccagtaa 1917
                 || ||||||||||| |||||
Sbjct: 105103634 cattggtttgttacaagtaa 105103653



 Score =  103 bits (52), Expect = 4e-19
 Identities = 74/80 (92%), Gaps = 1/80 (1%)
 Strand = Plus / Plus

                                                                             
Query: 1841      gtttcaccttggtgaaattccccctattcaaatctaatacaagcaaaaac-aagtgttca 1899
                 |||||||||||||||||||||||||||||| |||||||  |||||||||| |||||||||
Sbjct: 123794940 gtttcaccttggtgaaattccccctattcagatctaatgtaagcaaaaacaaagtgttca 123794999

                                     
Query: 1900      ctggtttgttaccagtaaaa 1919
                  ||||||||||| |||||||
Sbjct: 123795000 ttggtttgttacaagtaaaa 123795019



 Score = 99.6 bits (50), Expect = 6e-18
 Identities = 75/82 (91%), Gaps = 1/82 (1%)
 Strand = Plus / Minus

                                                                            
Query: 1839     gagtttcaccttggtgaaattccccctattcaaatctaatacaagcaaaaac-aagtgtt 1897
                |||||||||||||||||||||||||||||||| ||| ||| ||||||||||| |||||||
Sbjct: 88901033 gagtttcaccttggtgaaattccccctattcagatccaatgcaagcaaaaacaaagtgtt 88900974

                                      
Query: 1898     cactggtttgttaccagtaaaa 1919
                || ||| ||||||| |||||||
Sbjct: 88900973 cattggcttgttacaagtaaaa 88900952



 Score = 97.6 bits (49), Expect = 2e-17
 Identities = 71/77 (92%), Gaps = 1/77 (1%)
 Strand = Plus / Minus

                                                                            
Query: 1842     tttcaccttggtgaaattccccctattcaaatctaatacaagcaaaaac-aagtgttcac 1900
                ||||||||||||||||||||||||||||| |||||||  |||||||||| ||||||||| 
Sbjct: 54830908 tttcaccttggtgaaattccccctattcagatctaatgtaagcaaaaacaaagtgttcat 54830849

                                 
Query: 1901     tggtttgttaccagtaa 1917
                ||||||||||| |||||
Sbjct: 54830848 tggtttgttacaagtaa 54830832


>Sscrofa_ChrX 
||          Length = 144288218

 Score =  430 bits (217), Expect = e-117
 Identities = 290/313 (92%), Gaps = 1/313 (0%)
 Strand = Plus / Plus

                                                                            
Query: 1443     tgcggggagccgaggaaacacaggaggccaaggaagggaactagcctgacggcacagttc 1502
                |||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 82812047 tgcggggagccgaggagatacaggaggccaaggaagggaactagcctgacggcacagttc 82812106

                                                                            
Query: 1503     caaaggcagggttcctaaccaagggaaaagagcctacccaccggcgcagttccaagggta 1562
                | |||||||||||||||||| ||| |||| ||||||||||| ||| ||||||| |||| |
Sbjct: 82812107 cgaaggcagggttcctaaccgaggaaaaaaagcctacccactggcacagttccgagggca 82812166

                                                                            
Query: 1563     ggtttagaaatagggaaaggggcttacccagtggcacagttccaagggcaagttataaaa 1622
                 |||||||||||||||||  | ||||||||||||||||||||| |||||||||| |||||
Sbjct: 82812167 agtttagaaatagggaaaaagacttacccagtggcacagttccgagggcaagttctaaaa 82812226

                                                                            
Query: 1623     ataatgaggctcacctgctaacccgactacaacggcaacaataac-aaaacgaaggtttt 1681
                ||||||||||||||||||||||| ||| |||||||| |||||||| |||| |||||||||
Sbjct: 82812227 ataatgaggctcacctgctaacctgacaacaacggctacaataacaaaaatgaaggtttt 82812286

                                                                            
Query: 1682     gcacaatagtgcaagaataaaaattgcttcttggaaaattcagtctttcctgttgtttac 1741
                ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||
Sbjct: 82812287 gcacaatagtgcaagaataaaaattgctttttggaaaattcagtctttcctgttatttac 82812346

                             
Query: 1742     ttattactcagcc 1754
                |||||||||||||
Sbjct: 82812347 ttattactcagcc 82812359



 Score =  391 bits (197), Expect = e-105
 Identities = 282/309 (91%), Gaps = 1/309 (0%)
 Strand = Plus / Minus

                                                                            
Query: 1441     actgcggggagccgaggaaacacaggaggccaaggaagggaactagcctgacggcacagt 1500
                |||||||||||||||||| | |||||||||||||||||||||||||||||| || |||||
Sbjct: 74537185 actgcggggagccgaggagatacaggaggccaaggaagggaactagcctgatggtacagt 74537126

                                                                            
Query: 1501     tccaaaggcagggttcctaaccaagggaaaagagcctacccaccggcgcagttccaaggg 1560
                |||||||||||||||||||||| ||| |||| ||||||||| ||||| ||||||||||||
Sbjct: 74537125 tccaaaggcagggttcctaaccgaggaaaaa-agcctacccgccggcacagttccaaggg 74537067

                                                                            
Query: 1561     taggtttagaaatagggaaaggggcttacccagtggcacagttccaagggcaagttataa 1620
                 |||||||||||||| |||| |||||||||  | ||||||||||  |||||||||| |||
Sbjct: 74537066 caggtttagaaatagagaaaagggcttacctggcggcacagttctgagggcaagttctaa 74537007

                                                                            
Query: 1621     aaataatgaggctcacctgctaacccgactacaacggcaacaataacaaaacgaaggttt 1680
                ||||||||||||||||||||||||| ||| |||||| ||||||||| |||  ||||| ||
Sbjct: 74537006 aaataatgaggctcacctgctaacctgacaacaacgacaacaataataaagtgaaggctt 74536947

                                                                            
Query: 1681     tgcacaatagtgcaagaataaaaattgcttcttggaaaattcagtctttcctgttgttta 1740
                | ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 74536946 tacacaatagtgcaagaataaaaattgcttcttggaaaattcagtctttcctgttattta 74536887

                         
Query: 1741     cttattact 1749
                |||||||||
Sbjct: 74536886 cttattact 74536878



 Score =  391 bits (197), Expect = e-105
 Identities = 282/309 (91%), Gaps = 1/309 (0%)
 Strand = Plus / Plus

                                                                            
Query: 1441     actgcggggagccgaggaaacacaggaggccaaggaagggaactagcctgacggcacagt 1500
                |||||||||||||||||| | |||||||||||||||||||||||||||||| || |||||
Sbjct: 74666825 actgcggggagccgaggagatacaggaggccaaggaagggaactagcctgatggtacagt 74666884

                                                                            
Query: 1501     tccaaaggcagggttcctaaccaagggaaaagagcctacccaccggcgcagttccaaggg 1560
                |||||||||||||||||||||| ||| |||| ||||||||| ||||| ||||||||||||
Sbjct: 74666885 tccaaaggcagggttcctaaccgaggaaaaa-agcctacccgccggcacagttccaaggg 74666943

                                                                            
Query: 1561     taggtttagaaatagggaaaggggcttacccagtggcacagttccaagggcaagttataa 1620
                 |||||||||||||| |||| |||||||||  | ||||||||||  |||||||||| |||
Sbjct: 74666944 caggtttagaaatagagaaaagggcttacctggcggcacagttctgagggcaagttctaa 74667003

                                                                            
Query: 1621     aaataatgaggctcacctgctaacccgactacaacggcaacaataacaaaacgaaggttt 1680
                ||||||||||||||||||||||||| ||| |||||| ||||||||| |||  ||||| ||
Sbjct: 74667004 aaataatgaggctcacctgctaacctgacaacaacgacaacaataataaagtgaaggctt 74667063

                                                                            
Query: 1681     tgcacaatagtgcaagaataaaaattgcttcttggaaaattcagtctttcctgttgttta 1740
                | ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 74667064 tacacaatagtgcaagaataaaaattgcttcttggaaaattcagtctttcctgttattta 74667123

                         
Query: 1741     cttattact 1749
                |||||||||
Sbjct: 74667124 cttattact 74667132



 Score =  391 bits (197), Expect = e-105
 Identities = 285/313 (91%), Gaps = 1/313 (0%)
 Strand = Plus / Plus

                                                                            
Query: 1443     tgcggggagccgaggaaacacaggaggccaaggaagggaactagcctgacggcacagttc 1502
                |||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 83585592 tgcggggagccgaggagatacaggaggccaaggaagggaactagcctgacggcacagttc 83585651

                                                                            
Query: 1503     caaaggcagggttcctaaccaagggaaaagagcctacccaccggcgcagttccaagggta 1562
                | |||||||||||||||||  | | ||||  |||||||| | ||| ||||||| |||| |
Sbjct: 83585652 cgaaggcagggttcctaactgatgaaaaaatgcctaccctctggcacagttccgagggca 83585711

                                                                            
Query: 1563     ggtttagaaatagggaaaggggcttacccagtggcacagttccaagggcaagttataaaa 1622
                ||||||||||||||||||||||||||||| | ||||||||||  ||| |||||| |||||
Sbjct: 83585712 ggtttagaaatagggaaaggggcttaccctgcggcacagttctgaggacaagttctaaaa 83585771

                                                                            
Query: 1623     ataatgaggctcacctgctaacccgactacaacggcaacaataacaaaacgaaggttttg 1682
                ||||||||||||||| |||||||| || ||||||||||||||||||||| ||||| ||||
Sbjct: 83585772 ataatgaggctcaccagctaacccaacaacaacggcaacaataacaaaatgaaggctttg 83585831

                                                                            
Query: 1683     cacaatagtgcaagaat-aaaaattgcttcttggaaaattcagtctttcctgttgtttac 1741
                ||||||||||||||||| |||||||||||||| ||||||||||||||||||||| |||||
Sbjct: 83585832 cacaatagtgcaagaataaaaaattgcttcttcgaaaattcagtctttcctgttatttac 83585891

                             
Query: 1742     ttattactcagcc 1754
                |||||||||||||
Sbjct: 83585892 ttattactcagcc 83585904



 Score =  365 bits (184), Expect = 6e-98
 Identities = 277/308 (89%)
 Strand = Plus / Minus

                                                                            
Query: 1447     gggagccgaggaaacacaggaggccaaggaagggaactagcctgacggcacagttccaaa 1506
                |||||||||||| | |||||||||||| ||||||||||||| ||||||||||||||   |
Sbjct: 28680888 gggagccgaggagatacaggaggccaaagaagggaactagcttgacggcacagttctgta 28680829

                                                                            
Query: 1507     ggcagggttcctaaccaagggaaaagagcctacccaccggcgcagttccaagggtaggtt 1566
                ||||||||| |||||| ||| |||| ||||||||  | ||| ||||||| |||| |||||
Sbjct: 28680828 ggcagggtttctaaccgaggaaaaaaagcctacctgcgggcacagttccgagggcaggtt 28680769

                                                                            
Query: 1567     tagaaatagggaaaggggcttacccagtggcacagttccaagggcaagttataaaaataa 1626
                |||||||||||||| || |||||||||  |||||||||  |||||||||| |||||||||
Sbjct: 28680768 tagaaatagggaaaaggacttacccagcagcacagttctgagggcaagttctaaaaataa 28680709

                                                                            
Query: 1627     tgaggctcacctgctaacccgactacaacggcaacaataacaaaacgaaggttttgcaca 1686
                |||||||||||||||||||  || |||| |||||||||||||||||||||  ||||||||
Sbjct: 28680708 tgaggctcacctgctaacctaacaacaatggcaacaataacaaaacgaagtctttgcaca 28680649

                                                                            
Query: 1687     atagtgcaagaataaaaattgcttcttggaaaattcagtctttcctgttgtttacttatt 1746
                ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 28680648 atagtgcaagaataaaaattgcttcttggaaaattcagtctttcctgttatttacttatt 28680589

                        
Query: 1747     actcagcc 1754
                ||||||||
Sbjct: 28680588 actcagcc 28680581



 Score =  349 bits (176), Expect = 4e-93
 Identities = 277/310 (89%), Gaps = 3/310 (0%)
 Strand = Plus / Minus

                                                                            
Query: 1443     tgcggggagccgaggaaacacaggaggccaaggaagggaactagcctgacggcacagttc 1502
                |||||||||||||||| |  ||||||||||||| ||||||||||||||| |||||||| |
Sbjct: 78168690 tgcggggagccgaggagatgcaggaggccaagggagggaactagcctgatggcacagtcc 78168631

                                                                            
Query: 1503     caaaggcagggttcctaaccaagggaaaagagcctacccaccggcgcagttccaagggta 1562
                | |||||||||||||||||||||| |||| ||||||||||| ||| ||||||| | || |
Sbjct: 78168630 cgaaggcagggttcctaaccaaggaaaaaaagcctacccactggcacagttccgatggca 78168571

                                                                            
Query: 1563     ggtttagaaatagggaaaggggcttacccagtggcacagttccaagggcaagttataaaa 1622
                |||||||||||||||||| |||||||||| | ||||||||||  |||||||||| |||||
Sbjct: 78168570 ggtttagaaatagggaaaagggcttaccctgcggcacagttctgagggcaagttctaaaa 78168511

                                                                            
Query: 1623     ataatgaggctcacctgctaacccgactacaacggcaacaataacaaaacgaaggttttg 1682
                ||||||||||||||||||||||||||| |||| ||| |||||||||||| ||||| ||||
Sbjct: 78168510 ataatgaggctcacctgctaacccgacaacaatggctacaataacaaaatgaaggctttg 78168451

                                                                            
Query: 1683     cacaatagtgcaagaataaaaattgcttcttggaaaattcagtctttcctgttgtttact 1742
                ||||| ||||||||||||||||| ||||||||||||| ||||||||   |||| ||||||
Sbjct: 78168450 cacaacagtgcaagaataaaaatcgcttcttggaaaaatcagtctt---tgttatttact 78168394

                          
Query: 1743     tattactcag 1752
                ||||| ||||
Sbjct: 78168393 tattattcag 78168384



 Score =  345 bits (174), Expect = 6e-92
 Identities = 274/306 (89%), Gaps = 1/306 (0%)
 Strand = Plus / Minus

                                                                            
Query: 1443     tgcggggagccgaggaaacacaggaggccaaggaagggaactagcctgacggcacagttc 1502
                |||||||||| ||||| |  ||||||||| ||||||||||||||||||||||||||||||
Sbjct: 96145595 tgcggggagctgaggagattcaggaggccgaggaagggaactagcctgacggcacagttc 96145536

                                                                            
Query: 1503     caaaggcagggttcctaaccaagggaaaagagcctacccaccggcgcagttccaagggta 1562
                | ||||||||||||||||||||||||||| ||||||||| ||||| |||||||||||| |
Sbjct: 96145535 cgaaggcagggttcctaaccaagggaaaaaagcctaccccccggcacagttccaagggca 96145476

                                                                            
Query: 1563     ggtttagaaatagggaaaggggcttacccagtggcacagttccaagggcaagttataaaa 1622
                |||||||||||||||||| |||||||||| | ||||||||||  |||||||||| |||||
Sbjct: 96145475 ggtttagaaatagggaaaagggcttaccctgcggcacagttctgagggcaagttctaaaa 96145416

                                                                            
Query: 1623     ataatgaggctcacctgctaacccgactacaacggcaacaataacaaaacgaaggttttg 1682
                ||||||||||||||||||||||| ||| |||| ||| |||||||||||| ||||| ||||
Sbjct: 96145415 ataatgaggctcacctgctaaccagacaacaatggctacaataacaaaatgaaggctttg 96145356

                                                                            
Query: 1683     cacaatagtgcaagaataaaaattgcttcttgg-aaaattcagtctttcctgttgtttac 1741
                ||||| |  ||||||||||||||   ||||||| |||| |||||||||| |||| |||||
Sbjct: 96145355 cacaacaaagcaagaataaaaatcatttcttggaaaaaatcagtctttcttgttatttac 96145296

                      
Query: 1742     ttatta 1747
                ||||||
Sbjct: 96145295 ttatta 96145290



 Score =  293 bits (148), Expect = 2e-76
 Identities = 259/296 (87%)
 Strand = Plus / Minus

                                                                            
Query: 1440     gactgcggggagccgaggaaacacaggaggccaaggaagggaactagcctgacggcacag 1499
                ||||||||||||||||||| |  ||||||||  ||||||||||||||||||| |||||||
Sbjct: 51210013 gactgcggggagccgaggagatgcaggaggctgaggaagggaactagcctgatggcacag 51209954

                                                                            
Query: 1500     ttccaaaggcagggttcctaaccaagggaaaagagcctacccaccggcgcagttccaagg 1559
                |||  |||||||||||||||||| ||| |||| ||||||||| || || ||||||  | |
Sbjct: 51209953 ttctgaaggcagggttcctaaccgaggaaaaaaagcctaccctcctgcacagttctgaag 51209894

                                                                            
Query: 1560     gtaggtttagaaatagggaaaggggcttacccagtggcacagttccaagggcaagttata 1619
                | ||||||||||||||||||| || ||||||| | || |||||||  |||||||||| ||
Sbjct: 51209893 gcaggtttagaaatagggaaaaggccttacccggcggtacagttctgagggcaagttcta 51209834

                                                                            
Query: 1620     aaaataatgaggctcacctgctaacccgactacaacggcaacaataacaaaacgaaggtt 1679
                ||||||||||||||||||||||||||| || |||| ||| |||||||||||| ||||| |
Sbjct: 51209833 aaaataatgaggctcacctgctaacccaacaacaatggctacaataacaaaatgaaggct 51209774

                                                                        
Query: 1680     ttgcacaatagtgcaagaataaaaattgcttcttggaaaattcagtctttcctgtt 1735
                |||||||| ||| ||||||||||||| ||||||||||||| |||||||||| ||||
Sbjct: 51209773 ttgcacaacagtccaagaataaaaatcgcttcttggaaaaatcagtctttcttgtt 51209718



 Score =  218 bits (110), Expect = 9e-54
 Identities = 159/174 (91%), Gaps = 1/174 (0%)
 Strand = Plus / Minus

                                                                            
Query: 1562     aggtttagaaatagggaaaggggcttacccagtggcacagttccaagggcaagttataaa 1621
                ||||||||||||||||||||||||||| |  | |||||||||| | ||||||||| ||||
Sbjct: 32341392 aggtttagaaatagggaaaggggcttaactggcggcacagttcta-gggcaagttctaaa 32341334

                                                                            
Query: 1622     aataatgaggctcacctgctaacccgactacaacggcaacaataacaaaacgaaggtttt 1681
                |||||||||||||||||||||||||||| |||  ||||||||||| |||| ||||| |||
Sbjct: 32341333 aataatgaggctcacctgctaacccgacaacagtggcaacaataagaaaatgaaggcttt 32341274

                                                                      
Query: 1682     gcacaatagtgcaagaataaaaattgcttcttggaaaattcagtctttcctgtt 1735
                |||||||||||||||||||||| ||||||||||||||||||||| |||||||||
Sbjct: 32341273 gcacaatagtgcaagaataaaagttgcttcttggaaaattcagtttttcctgtt 32341220



 Score =  218 bits (110), Expect = 9e-54
 Identities = 159/174 (91%), Gaps = 1/174 (0%)
 Strand = Plus / Plus

                                                                            
Query: 1562     aggtttagaaatagggaaaggggcttacccagtggcacagttccaagggcaagttataaa 1621
                ||||||||||||||||||||||||||| |  | |||||||||| | ||||||||| ||||
Sbjct: 32445491 aggtttagaaatagggaaaggggcttaactggcggcacagttcta-gggcaagttctaaa 32445549

                                                                            
Query: 1622     aataatgaggctcacctgctaacccgactacaacggcaacaataacaaaacgaaggtttt 1681
                |||||||||||||||||||||||||||| |||  ||||||||||| |||| ||||| |||
Sbjct: 32445550 aataatgaggctcacctgctaacccgacaacagtggcaacaataagaaaatgaaggcttt 32445609

                                                                      
Query: 1682     gcacaatagtgcaagaataaaaattgcttcttggaaaattcagtctttcctgtt 1735
                |||||||||||||||||||||| ||||||||||||||||||||| |||||||||
Sbjct: 32445610 gcacaatagtgcaagaataaaagttgcttcttggaaaattcagtttttcctgtt 32445663



 Score =  115 bits (58), Expect = 9e-23
 Identities = 77/82 (93%), Gaps = 1/82 (1%)
 Strand = Plus / Plus

                                                                            
Query: 1839     gagtttcaccttggtgaaattccccctattcaaatctaatacaagcaaaaac-aagtgtt 1897
                ||||||||||||||||||||||| |||||||| ||||||||||||||||||| |||||||
Sbjct: 82812446 gagtttcaccttggtgaaattcctcctattcagatctaatacaagcaaaaacaaagtgtt 82812505

                                      
Query: 1898     cactggtttgttaccagtaaaa 1919
                || ||||||||||| |||||||
Sbjct: 82812506 cattggtttgttacaagtaaaa 82812527



 Score =  107 bits (54), Expect = 2e-20
 Identities = 77/82 (93%), Gaps = 2/82 (2%)
 Strand = Plus / Minus

                                                                            
Query: 1839     gagtttcaccttggtgaaattccccctattcaaatctaatacaagcaaaaac-aagtgtt 1897
                |||||||||||||||||||||||||| ||||| ||||||| ||||||||||| |||||||
Sbjct: 74536773 gagtttcaccttggtgaaattccccc-attcagatctaatgcaagcaaaaacaaagtgtt 74536715

                                      
Query: 1898     cactggtttgttaccagtaaaa 1919
                |||||||||||||| |||||||
Sbjct: 74536714 cactggtttgttacaagtaaaa 74536693



 Score =  107 bits (54), Expect = 2e-20
 Identities = 77/82 (93%), Gaps = 2/82 (2%)
 Strand = Plus / Plus

                                                                            
Query: 1839     gagtttcaccttggtgaaattccccctattcaaatctaatacaagcaaaaac-aagtgtt 1897
                |||||||||||||||||||||||||| ||||| ||||||| ||||||||||| |||||||
Sbjct: 74667237 gagtttcaccttggtgaaattccccc-attcagatctaatgcaagcaaaaacaaagtgtt 74667295

                                      
Query: 1898     cactggtttgttaccagtaaaa 1919
                |||||||||||||| |||||||
Sbjct: 74667296 cactggtttgttacaagtaaaa 74667317



 Score =  103 bits (52), Expect = 4e-19
 Identities = 74/80 (92%), Gaps = 1/80 (1%)
 Strand = Plus / Minus

                                                                            
Query: 1839     gagtttcaccttggtgaaattccccctattcaaatctaatacaagcaaaaac-aagtgtt 1897
                |||||||||||||||||||||||||||||||| |||||||  |||||||||| |||||||
Sbjct: 28680482 gagtttcaccttggtgaaattccccctattcagatctaatgtaagcaaaaacaaagtgtt 28680423

                                    
Query: 1898     cactggtttgttaccagtaa 1917
                || ||||||||||| |||||
Sbjct: 28680422 cattggtttgttacgagtaa 28680403



 Score =  103 bits (52), Expect = 4e-19
 Identities = 75/80 (93%), Gaps = 2/80 (2%)
 Strand = Plus / Plus

                                                                            
Query: 1839     gagtttcaccttggtgaaattccccctattcaaatctaatacaagcaaaaac-aagtgtt 1897
                |||||||||||||||||||||||||| ||||| ||||||||||||||||||| |||||||
Sbjct: 83586002 gagtttcaccttggtgaaattccccc-attcagatctaatacaagcaaaaacaaagtgtt 83586060

                                    
Query: 1898     cactggtttgttaccagtaa 1917
                || ||||||||||| |||||
Sbjct: 83586061 cattggtttgttacaagtaa 83586080



 Score = 91.7 bits (46), Expect = 1e-15
 Identities = 68/74 (91%), Gaps = 1/74 (1%)
 Strand = Plus / Minus

                                                                            
Query: 1839     gagtttcaccttggtgaaattccccctattcaaatctaatacaagcaaaaac-aagtgtt 1897
                |||||||| ||||||||||||||||||||||| |||||||  |||||||||| |||||||
Sbjct: 32341109 gagtttcatcttggtgaaattccccctattcagatctaatgtaagcaaaaacaaagtgtt 32341050

                              
Query: 1898     cactggtttgttac 1911
                || |||||||||||
Sbjct: 32341049 cattggtttgttac 32341036



 Score = 91.7 bits (46), Expect = 1e-15
 Identities = 68/74 (91%), Gaps = 1/74 (1%)
 Strand = Plus / Plus

                                                                            
Query: 1839     gagtttcaccttggtgaaattccccctattcaaatctaatacaagcaaaaac-aagtgtt 1897
                |||||||| ||||||||||||||||||||||| |||||||  |||||||||| |||||||
Sbjct: 32445774 gagtttcatcttggtgaaattccccctattcagatctaatgtaagcaaaaacaaagtgtt 32445833

                              
Query: 1898     cactggtttgttac 1911
                || |||||||||||
Sbjct: 32445834 cattggtttgttac 32445847



 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 73/82 (89%), Gaps = 3/82 (3%)
 Strand = Plus / Minus

                                                                            
Query: 1441     actgcggggagccgaggaaacacaggaggccaaggaagggaactagcctgacggcacagt 1500
                ||||||||||||| |||| ||||||||||||||||   ||| ||||||||| ||||||||
Sbjct: 32341534 actgcggggagccaaggagacacaggaggccaagg---ggagctagcctgatggcacagt 32341478

                                      
Query: 1501     tccaaaggcagggttcctaacc 1522
                ||  ||||||||||||||||||
Sbjct: 32341477 tctgaaggcagggttcctaacc 32341456



 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 73/82 (89%), Gaps = 3/82 (3%)
 Strand = Plus / Plus

                                                                            
Query: 1441     actgcggggagccgaggaaacacaggaggccaaggaagggaactagcctgacggcacagt 1500
                ||||||||||||| |||| ||||||||||||||||   ||| ||||||||| ||||||||
Sbjct: 32445349 actgcggggagccaaggagacacaggaggccaagg---ggagctagcctgatggcacagt 32445405

                                      
Query: 1501     tccaaaggcagggttcctaacc 1522
                ||  ||||||||||||||||||
Sbjct: 32445406 tctgaaggcagggttcctaacc 32445427


>Sscrofa_Chr03 
||          Length = 144787322

 Score =  416 bits (210), Expect = e-113
 Identities = 288/314 (91%)
 Strand = Plus / Minus

                                                                            
Query: 1441     actgcggggagccgaggaaacacaggaggccaaggaagggaactagcctgacggcacagt 1500
                |||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 76531790 actgcggggagccgaggagatacaggaggccaaggaagggaactagcctgacggcacagt 76531731

                                                                            
Query: 1501     tccaaaggcagggttcctaaccaagggaaaagagcctacccaccggcgcagttccaaggg 1560
                ||| |||||||||||||||||| ||| |||| ||||||| ||||||| | ||||  ||||
Sbjct: 76531730 tccgaaggcagggttcctaaccgaggaaaaaaagcctacacaccggcccggttctgaggg 76531671

                                                                            
Query: 1561     taggtttagaaatagggaaaggggcttacccagtggcacagttccaagggcaagttataa 1620
                 |||||||||||||||||||||||||||||| | ||||||||||| |||||||||| |||
Sbjct: 76531670 caggtttagaaatagggaaaggggcttacccggcggcacagttccgagggcaagttctaa 76531611

                                                                            
Query: 1621     aaataatgaggctcacctgctaacccgactacaacggcaacaataacaaaacgaaggttt 1680
                |||||||||||||||||||||||||| ||  ||||| ||||||||| |||| ||||| ||
Sbjct: 76531610 aaataatgaggctcacctgctaacccaacagcaacgacaacaataataaaatgaaggctt 76531551

                                                                            
Query: 1681     tgcacaatagtgcaagaataaaaattgcttcttggaaaattcagtctttcctgttgttta 1740
                |||||||||||||| |||||||| ||||||||||||||||||||||||||||||| ||||
Sbjct: 76531550 tgcacaatagtgcaggaataaaagttgcttcttggaaaattcagtctttcctgttattta 76531491

                              
Query: 1741     cttattactcagcc 1754
                ||||||||||||||
Sbjct: 76531490 cttattactcagcc 76531477



 Score =  232 bits (117), Expect = 6e-58
 Identities = 247/290 (85%), Gaps = 9/290 (3%)
 Strand = Plus / Minus

                                                                            
Query: 1463     caggaggccaaggaagggaactagcctgacggcacagttccaaaggcagggttcctaacc 1522
                |||||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||||
Sbjct: 64160605 caggaggccaaggaagggaactagcctgacagcacaattccgaaggcagggttcctaacc 64160546

                                                                            
Query: 1523     aagggaaaagagcctacccaccggcgcagttccaagggtaggtttagaaatagggaaagg 1582
                 ||| |||| ||||||||  || || ||||||| ||||  |||||||||||||||||| |
Sbjct: 64160545 taggaaaaa-agcctacctgccagcacagttccgagggcgggtttagaaatagggaaaag 64160487

                                                                            
Query: 1583     ggcttacccagtggcacagttccaagggcaagttataaaaataatgaggctcacctgcta 1642
                || |||||||||        ||| |||||||||| |||||| |||||||| |||||  ||
Sbjct: 64160486 ggtttacccagt--------tcccagggcaagttctaaaaacaatgaggcccaccttgta 64160435

                                                                            
Query: 1643     acccgactacaacggcaacaataacaaaacgaaggttttgcacaatagtgcaagaataaa 1702
                ||| ||| |||| ||||||||||||||||  |||  ||||||||| ||||||||||||||
Sbjct: 64160434 acctgacaacaatggcaacaataacaaaataaagactttgcacaacagtgcaagaataaa 64160375

                                                                  
Query: 1703     aattgcttcttggaaaattcagtctttcctgttgtttacttattactcag 1752
                ||| ||||||||||||| ||||| ||| ||||| ||||||||||| ||||
Sbjct: 64160374 aatcgcttcttggaaaaatcagtattttctgttatttacttattattcag 64160325



 Score =  230 bits (116), Expect = 2e-57
 Identities = 155/168 (92%)
 Strand = Plus / Plus

                                                                            
Query: 1587     tacccagtggcacagttccaagggcaagttataaaaataatgaggctcacctgctaaccc 1646
                ||||| ||||||||||| |  ||||||||| |||||||||||||||||||||| ||||||
Sbjct: 76142261 tacccggtggcacagtttcgtgggcaagttctaaaaataatgaggctcacctgttaaccc 76142320

                                                                            
Query: 1647     gactacaacggcaacaataacaaaacgaaggttttgcacaatagtgcaagaataaaaatt 1706
                  | ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||
Sbjct: 76142321 agcaacaacggcaacaataacaaaatgaaggctttgcacaatagtgcaagaataaaaatt 76142380

                                                                
Query: 1707     gcttcttggaaaattcagtctttcctgttgtttacttattactcagcc 1754
                |||||||||||||||||||||| |||||| ||||||||||||||||||
Sbjct: 76142381 gcttcttggaaaattcagtcttccctgttatttacttattactcagcc 76142428



 Score =  109 bits (55), Expect = 6e-21
 Identities = 85/95 (89%)
 Strand = Plus / Plus

                                                                            
Query: 1447     gggagccgaggaaacacaggaggccaaggaagggaactagcctgacggcacagttccaaa 1506
                |||||||||||| | |||||||||||||||||||| ||||||||||||||||||||| ||
Sbjct: 76142171 gggagccgaggatatacaggaggccaaggaagggagctagcctgacggcacagttccgaa 76142230

                                                   
Query: 1507     ggcagggttcctaaccaagggaaaagagcctaccc 1541
                |||||  || |||||| ||| |||| |||||||||
Sbjct: 76142231 ggcagaatttctaaccgaggaaaaaaagcctaccc 76142265



 Score =  103 bits (52), Expect = 4e-19
 Identities = 74/80 (92%), Gaps = 1/80 (1%)
 Strand = Plus / Plus

                                                                            
Query: 1839     gagtttcaccttggtgaaattccccctattcaaatctaatacaagcaaaaac-aagtgtt 1897
                ||||||||||||||||||| |||||||||||| ||||||| ||||||||||| |||||||
Sbjct: 76142525 gagtttcaccttggtgaaagtccccctattcagatctaatgcaagcaaaaacaaagtgtt 76142584

                                    
Query: 1898     cactggtttgttaccagtaa 1917
                || ||||||||||| |||||
Sbjct: 76142585 cattggtttgttacaagtaa 76142604



 Score = 97.6 bits (49), Expect = 2e-17
 Identities = 71/77 (92%), Gaps = 1/77 (1%)
 Strand = Plus / Minus

                                                                            
Query: 1842     tttcaccttggtgaaattccccctattcaaatctaatacaagcaaaaac-aagtgttcac 1900
                |||||||||||||||| |||||||||||| ||||||| ||||||||||| ||||||||| 
Sbjct: 76531373 tttcaccttggtgaaagtccccctattcagatctaatgcaagcaaaaacgaagtgttcat 76531314

                                 
Query: 1901     tggtttgttaccagtaa 1917
                ||||||||||| |||||
Sbjct: 76531313 tggtttgttacaagtaa 76531297



 Score = 83.8 bits (42), Expect = 3e-13
 Identities = 48/50 (96%)
 Strand = Plus / Minus

                                                                 
Query: 1839    gagtttcaccttggtgaaattccccctattcaaatctaatacaagcaaaa 1888
               ||||||||||||||||||||| |||||||||| |||||||||||||||||
Sbjct: 6843777 gagtttcaccttggtgaaatttcccctattcagatctaatacaagcaaaa 6843728


>Sscrofa_Chr11 
||          Length = 87690581

 Score =  404 bits (204), Expect = e-110
 Identities = 286/310 (92%), Gaps = 5/310 (1%)
 Strand = Plus / Minus

                                                                            
Query: 1446     ggggagccgaggaaacacaggaggccaaggaagggaactagcctgacggcacagttccaa 1505
                ||||||||||||| | |||||||||| |||||||||||||||||||| |||||||||| |
Sbjct: 30567432 ggggagccgaggagatacaggaggccgaggaagggaactagcctgacagcacagttccga 30567373

                                                                            
Query: 1506     aggcagggttcctaaccaagggaaaagagcctacccaccggcgcagttccaagggtaggt 1565
                || |||||||||||||||||| |||| || |||||| ||||| ||||||| |||| ||||
Sbjct: 30567372 ag-cagggttcctaaccaaggaaaaaaagactacccgccggcacagttccgagggcaggt 30567314

                                                                            
Query: 1566     ttagaaatagggaaa-ggggcttacccagtggcacagttccaagggcaagttataaaaat 1624
                ||||||||||||||| ||||||||||| |||||||||||||||||||||||| |||||||
Sbjct: 30567313 ttagaaatagggaaaaggggcttacccggtggcacagttccaagggcaagttctaaaaat 30567254

                                                                            
Query: 1625     aatgaggctcacctgctaacccgactacaacggcaacaataacaaaacgaaggttttgca 1684
                |||||||||||||||||||||| ||   ||||||||||||||||||| ||||| ||||||
Sbjct: 30567253 aatgaggctcacctgctaacccaac---aacggcaacaataacaaaatgaaggctttgca 30567197

                                                                            
Query: 1685     caatagtgcaagaataaaaattgcttcttggaaaattcagtctttcctgttgtttactta 1744
                ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||
Sbjct: 30567196 caatagtgcaagaataaaaattgcttcttggaaaatttagtctttcctgttatttactta 30567137

                          
Query: 1745     ttactcagcc 1754
                ||||||||||
Sbjct: 30567136 ttactcagcc 30567127



 Score =  327 bits (165), Expect = 1e-86
 Identities = 268/301 (89%), Gaps = 1/301 (0%)
 Strand = Plus / Plus

                                                                            
Query: 1448     ggagccgaggaaacacaggaggccaaggaagggaactagcctgacggcacagttccaaag 1507
                ||||||||||| |  ||||||||||||||||||||||| ||||| ||||||||||| |||
Sbjct: 54480899 ggagccgaggagatgcaggaggccaaggaagggaactaacctgatggcacagttcctaag 54480958

                                                                            
Query: 1508     gcagggttcctaaccaagggaaaaga-gcctacccaccggcgcagttccaagggtaggtt 1566
                |||||||| |||||| |||||||| | |||||||| ||||| ||||||| |||| |||||
Sbjct: 54480959 gcagggtttctaaccgagggaaaaaaagcctacccgccggcacagttccgagggcaggtt 54481018

                                                                            
Query: 1567     tagaaatagggaaaggggcttacccagtggcacagttccaagggcaagttataaaaataa 1626
                |  ||||||||||| |||||||||  |  |||||| |||||||||||||| |||||||||
Sbjct: 54481019 ttaaaatagggaaaagggcttacctggcagcacagctccaagggcaagttctaaaaataa 54481078

                                                                            
Query: 1627     tgaggctcacctgctaacccgactacaacggcaacaataacaaaacgaaggttttgcaca 1686
                ||||||||||||||||||||||| |||| ||||| |||||||||| ||||| ||||||||
Sbjct: 54481079 tgaggctcacctgctaacccgacaacaatggcaataataacaaaatgaaggctttgcaca 54481138

                                                                            
Query: 1687     atagtgcaagaataaaaattgcttcttggaaaattcagtctttcctgttgtttacttatt 1746
                | ||||||| ||||||||| ||||||||||||| ||||||||||||||| ||||||||||
Sbjct: 54481139 acagtgcaaaaataaaaatcgcttcttggaaaaatcagtctttcctgttatttacttatt 54481198

                 
Query: 1747     a 1747
                |
Sbjct: 54481199 a 54481199



 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 69/76 (90%), Gaps = 1/76 (1%)
 Strand = Plus / Plus

                                                                            
Query: 1843     ttcaccttggtgaaattccccctattcaaatctaatacaagcaaaaac-aagtgttcact 1901
                |||||||||||||||||||||||||||| |||||||  |||||||||| |||||||||  
Sbjct: 54481305 ttcaccttggtgaaattccccctattcagatctaatgtaagcaaaaacaaagtgttcata 54481364

                                
Query: 1902     ggtttgttaccagtaa 1917
                |||||||||| |||||
Sbjct: 54481365 ggtttgttacaagtaa 54481380



 Score = 75.8 bits (38), Expect = 8e-11
 Identities = 50/54 (92%)
 Strand = Plus / Minus

                                                                      
Query: 1839     gagtttcaccttggtgaaattccccctattcaaatctaatacaagcaaaaacaa 1892
                ||||||||||||||| |||||||||||||||| |||||||  ||||||||||||
Sbjct: 30567025 gagtttcaccttggtaaaattccccctattcagatctaatgtaagcaaaaacaa 30566972


>Sscrofa_Chr01 
||          Length = 315321322

 Score =  404 bits (204), Expect = e-110
 Identities = 285/312 (91%)
 Strand = Plus / Minus

                                                                            
Query: 1443     tgcggggagccgaggaaacacaggaggccaaggaagggaactagcctgacggcacagttc 1502
                |||||||||||||||| |  |||||||||||||||||||||||||||||| |||||||||
Sbjct: 63877659 tgcggggagccgaggagattcaggaggccaaggaagggaactagcctgaccgcacagttc 63877600

                                                                            
Query: 1503     caaaggcagggttcctaaccaagggaaaagagcctacccaccggcgcagttccaagggta 1562
                |||||||||||||||||||||||| ||||  |||||||| || || ||||||  |||| |
Sbjct: 63877599 caaaggcagggttcctaaccaaggaaaaaaggcctacccgccagcacagttctgagggca 63877540

                                                                            
Query: 1563     ggtttagaaatagggaaaggggcttacccagtggcacagttccaagggcaagttataaaa 1622
                |||||||||||||||||| |||||||||| ||||||||||||| |||| ||||| |||||
Sbjct: 63877539 ggtttagaaatagggaaaagggcttacccggtggcacagttccgagggtaagttctaaaa 63877480

                                                                            
Query: 1623     ataatgaggctcacctgctaacccgactacaacggcaacaataacaaaacgaaggttttg 1682
                ||||||||||||||||||||||| ||| |||| | ||||||||| |||| ||||| ||||
Sbjct: 63877479 ataatgaggctcacctgctaaccggacaacaatgacaacaataataaaatgaaggctttg 63877420

                                                                            
Query: 1683     cacaatagtgcaagaataaaaattgcttcttggaaaattcagtctttcctgttgtttact 1742
                | ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 63877419 cgcaatagtgcaagaataaaaattgcttcttggaaaattcagtctttcctgttatttact 63877360

                            
Query: 1743     tattactcagcc 1754
                ||||||||||||
Sbjct: 63877359 tattactcagcc 63877348



 Score =  367 bits (185), Expect = 2e-98
 Identities = 279/309 (90%), Gaps = 1/309 (0%)
 Strand = Plus / Minus

                                                                             
Query: 1446      ggggagccgaggaaacacaggaggccaaggaagggaactagcctgacggcacagttccaa 1505
                 |||||||| |||| |  ||||||||||||||||||||||||||||| ||||||||||  |
Sbjct: 100439383 ggggagccaaggagatgcaggaggccaaggaagggaactagcctgatggcacagttcgga 100439324

                                                                             
Query: 1506      aggcagggttcctaaccaagggaaaagagcctacccaccggcgcagttccaagggtaggt 1565
                 ||||||||||||||||  |||||||| |||||||| |||||| ||||||| |||| ||||
Sbjct: 100439323 aggcagggttcctaactgagggaaaaaagcctaccaaccggcacagttccgagggcaggt 100439264

                                                                             
Query: 1566      ttagaaatagggaaaggggcttacccagtggcacagttccaagggcaagttataaaaata 1625
                 ||| ||||||||||| || | | ||||  |||||||||||||||||||||| ||||||||
Sbjct: 100439263 ttaaaaatagggaaaaggacctccccac-ggcacagttccaagggcaagttctaaaaata 100439205

                                                                             
Query: 1626      atgaggctcacctgctaacccgactacaacggcaacaataacaaaacgaaggttttgcac 1685
                 |||||||||||||||||||| ||| |||| |||||||||||||||| |||||||||||||
Sbjct: 100439204 atgaggctcacctgctaacctgacaacaatggcaacaataacaaaatgaaggttttgcac 100439145

                                                                             
Query: 1686      aatagtgcaagaataaaaattgcttcttggaaaattcagtctttcctgttgtttacttat 1745
                 ||||||| ||||||||| || ||||||||||||||||||||||||||||| |||||||||
Sbjct: 100439144 aatagtgaaagaataaagatcgcttcttggaaaattcagtctttcctgttatttacttat 100439085

                          
Query: 1746      tactcagcc 1754
                 |||||||||
Sbjct: 100439084 tactcagcc 100439076



 Score =  359 bits (181), Expect = 4e-96
 Identities = 274/305 (89%)
 Strand = Plus / Minus

                                                                             
Query: 1443      tgcggggagccgaggaaacacaggaggccaaggaagggaactagcctgacggcacagttc 1502
                 ||||| |||||||||| |  ||||||||| ||||||||||||||||||||  ||||||||
Sbjct: 275306384 tgcggagagccgaggagatgcaggaggccgaggaagggaactagcctgaccacacagttc 275306325

                                                                             
Query: 1503      caaaggcagggttcctaaccaagggaaaagagcctacccaccggcgcagttccaagggta 1562
                 | |||||||||||||||||| ||| |||| ||||||||| ||||| ||||||| |||| |
Sbjct: 275306324 cgaaggcagggttcctaaccgaggaaaaaaagcctacccgccggcacagttccgagggca 275306265

                                                                             
Query: 1563      ggtttagaaatagggaaaggggcttacccagtggcacagttccaagggcaagttataaaa 1622
                 ||||| |||||||||||| ||||||| |||| ||||||||||| |||||||||| |||||
Sbjct: 275306264 ggtttcgaaatagggaaaagggcttagccagcggcacagttccgagggcaagttctaaaa 275306205

                                                                             
Query: 1623      ataatgaggctcacctgctaacccgactacaacggcaacaataacaaaacgaaggttttg 1682
                 ||||||||||||||||||||||||||| |||| ||| |||||||||||| ||||| ||||
Sbjct: 275306204 ataatgaggctcacctgctaacccgacaacaatggctacaataacaaaatgaaggctttg 275306145

                                                                             
Query: 1683      cacaatagtgcaagaataaaaattgcttcttggaaaattcagtctttcctgttgtttact 1742
                 ||||| ||||||||||||||||| ||||||||||||| |||||||||| |||| ||||||
Sbjct: 275306144 cacaacagtgcaagaataaaaatcgcttcttggaaaaatcagtctttcttgttatttact 275306085

                      
Query: 1743      tatta 1747
                 |||||
Sbjct: 275306084 tatta 275306080



 Score =  339 bits (171), Expect = 3e-90
 Identities = 275/307 (89%), Gaps = 2/307 (0%)
 Strand = Plus / Plus

                                                                             
Query: 1442      ctgcggggagccgaggaaacacaggaggccaaggaagggaactagcctgacggcacagtt 1501
                 |||| |||||||||||| |  ||||||||| ||||||||||||||||||| |||||||||
Sbjct: 103233895 ctgcagggagccgaggagatgcaggaggccgaggaagggaactagcctgatggcacagtt 103233954

                                                                             
Query: 1502      ccaaaggcagggttcctaaccaagggaaaagagcctacccaccggcgcagttccaagggt 1561
                 || |||||||||||||||||| ||| |||| ||||||||| ||||| ||||||| |||| 
Sbjct: 103233955 ccgaaggcagggttcctaaccgaggaaaaaaagcctacccgccggcacagttccgagggc 103234014

                                                                             
Query: 1562      aggtttagaaatagggaaaggggctt-acccagtggcacagttccaagggcaagttataa 1620
                 |||||||||||| |||||| |||||| |||  ||||||||||||| || ||||||| |||
Sbjct: 103234015 aggtttagaaat-gggaaaagggcttaacctggtggcacagttcccagagcaagttctaa 103234073

                                                                             
Query: 1621      aaataatgaggctcacctgctaacccgactacaacggcaacaataacaaaacgaaggttt 1680
                 ||||||||||||||||||||||||| ||| ||||||||||||||||||||| ||||| ||
Sbjct: 103234074 aaataatgaggctcacctgctaacctgacaacaacggcaacaataacaaaatgaaggctt 103234133

                                                                             
Query: 1681      tgcacaatagtgcaagaataaaaattgcttcttggaaaattcagtctttcctgttgttta 1740
                 ||||||  ||||||||||||||||| ||||||||||||| |||||||||| |||| ||||
Sbjct: 103234134 tgcacagcagtgcaagaataaaaatcgcttcttggaaaaatcagtctttcttgttattta 103234193

                        
Query: 1741      cttatta 1747
                 |||||||
Sbjct: 103234194 cttatta 103234200



 Score =  319 bits (161), Expect = 3e-84
 Identities = 281/317 (88%), Gaps = 3/317 (0%)
 Strand = Plus / Minus

                                                                             
Query: 1440      gactgcggggagccgaggaaacacaggaggccaaggaagggaactagcctgacggcacag 1499
                 |||||||| ||||| |||| | || ||||||||||||||||||||||||||| |||||||
Sbjct: 311931885 gactgcggagagccaaggagatactggaggccaaggaagggaactagcctgaaggcacag 311931826

                                                                             
Query: 1500      ttccaaaggcagggttcctaaccaagggaaaaga-gcctacccaccggcgcagttccaag 1558
                 |||  |||||||||||||||||  ||| |||| | |||||||| | ||| ||||||  ||
Sbjct: 311931825 ttctgaaggcagggttcctaactgaggaaaaaaaagcctacccgctggcacagttctgag 311931766

                                                                             
Query: 1559      ggtaggtttagaaatagggaaa-ggggcttacccagtggcacagttccaagggcaagtta 1617
                 || |||||||| || ||||||| ||||||||||||| |||||||||||| | ||||||| 
Sbjct: 311931765 ggcaggtttaggaacagggaaaaggggcttacccaggggcacagttcca-gagcaagttc 311931707

                                                                             
Query: 1618      taaaaataatgaggctcacctgctaacccgactacaacggcaacaataacaaaacgaagg 1677
                 ||||||||||||||||||||||||||||| || |||| ||||||| |||||||| |||||
Sbjct: 311931706 taaaaataatgaggctcacctgctaacccaacaacaatggcaacagtaacaaaatgaagg 311931647

                                                                             
Query: 1678      ttttgcacaatagtgcaagaataaaaattgcttcttggaaaattcagtctttcctgttgt 1737
                  |||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| |
Sbjct: 311931646 ctttgcacaatagtgcaagaaaaaaaattgcttctgggaaaattcagtctttcctgttat 311931587

                                  
Query: 1738      ttacttattactcagcc 1754
                 |||||||||| ||||||
Sbjct: 311931586 ttacttattattcagcc 311931570



 Score =  297 bits (150), Expect = 1e-77
 Identities = 238/266 (89%), Gaps = 1/266 (0%)
 Strand = Plus / Plus

                                                                            
Query: 1439     tgactgcggggagccgaggaaacacaggaggccaaggaagggaactagcctgacggcaca 1498
                ||||||||| |||||||||| |  ||||||||| ||||||||||||||||||| ||||||
Sbjct: 83403212 tgactgcggagagccgaggagatgcaggaggccgaggaagggaactagcctgaaggcaca 83403271

                                                                            
Query: 1499     gttccaaaggcagggttcctaaccaagggaaaagagcctacccaccggcgcagttccaag 1558
                ||||| |||||||||||||||||| ||| |||| ||||||||| || || ||||||||||
Sbjct: 83403272 gttccgaaggcagggttcctaaccgaggaaaaaaagcctacccgccagcacagttccaag 83403331

                                                                            
Query: 1559     ggtaggttt-agaaatagggaaaggggcttacccagtggcacagttccaagggcaagtta 1617
                || |||||| | ||||||||||| |||||||||| | ||||||||||  |||||||||| 
Sbjct: 83403332 ggcaggttttaaaaatagggaaaagggcttacccggcggcacagttctgagggcaagttc 83403391

                                                                            
Query: 1618     taaaaataatgaggctcacctgctaacccgactacaacggcaacaataacaaaacgaagg 1677
                |||||| | ||||||||||||||||||||||| ||||||||||||||||||||| |||||
Sbjct: 83403392 taaaaacattgaggctcacctgctaacccgacaacaacggcaacaataacaaaatgaagg 83403451

                                          
Query: 1678     ttttgcacaatagtgcaagaataaaa 1703
                 ||||||||| |||||||||||||||
Sbjct: 83403452 ctttgcacaacagtgcaagaataaaa 83403477



 Score =  262 bits (132), Expect = 6e-67
 Identities = 266/308 (86%), Gaps = 2/308 (0%)
 Strand = Plus / Plus

                                                                             
Query: 1447      gggagccgaggaaacacaggaggccaaggaagggaactagcctgacggcacagttccaaa 1506
                 ||||||| |||| | |||||| ||||||||| |||| |||||||| ||||||||||  | 
Sbjct: 311916068 gggagccaaggagatacaggaagccaaggaaaggaagtagcctgaaggcacagttctga- 311916126

                                                                             
Query: 1507      ggcagggttcctaaccaagggaaaagagcctacccaccggcgcagttccaagggtaggtt 1566
                 ||||| |||||||||| ||  |||| ||||||||| | | | ||||||  |||| |||| 
Sbjct: 311916127 ggcagagttcctaaccgagttaaaaaagcctacccgctg-cacagttctgagggcaggta 311916185

                                                                             
Query: 1567      tagaaatagggaaaggggcttacccagtggcacagttccaagggcaagttataaaaataa 1626
                 |||||||||||||| |||||||||  | ||||||||||| |||||||||| |||||||||
Sbjct: 311916186 tagaaatagggaaaagggcttaccaggcggcacagttcctagggcaagttctaaaaataa 311916245

                                                                             
Query: 1627      tgaggctcacctgctaacccgactacaacggcaacaataacaaaacgaaggttttgcaca 1686
                 | | ||||||||||||||||    |||| ||||||| |||||||| ||||| ||||||||
Sbjct: 311916246 tcatgctcacctgctaacccagtaacaatggcaacagtaacaaaatgaaggctttgcaca 311916305

                                                                             
Query: 1687      atagtgcaagaataaaaattgcttcttggaaaattcagtctttcctgttgtttacttatt 1746
                 |||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||
Sbjct: 311916306 atagtgcaagaataaaaattgcttctgggaaaattcagtctttcctgttatttacttatt 311916365

                         
Query: 1747      actcagcc 1754
                 | ||||||
Sbjct: 311916366 attcagcc 311916373



 Score =  228 bits (115), Expect = 9e-57
 Identities = 148/159 (93%)
 Strand = Plus / Plus

                                                                            
Query: 1595     ggcacagttccaagggcaagttataaaaataatgaggctcacctgctaacccgactacaa 1654
                |||| |||||||| ||||||||||||||||||||||||||||||||||||| |||  |||
Sbjct: 74946870 ggcatagttccaaaggcaagttataaaaataatgaggctcacctgctaacctgacagcaa 74946929

                                                                            
Query: 1655     cggcaacaataacaaaacgaaggttttgcacaatagtgcaagaataaaaattgcttcttg 1714
                ||||||||||||||||| ||||| |||||||||||||| ||||||||||||||||| |||
Sbjct: 74946930 cggcaacaataacaaaatgaaggctttgcacaatagtggaagaataaaaattgctttttg 74946989

                                                       
Query: 1715     gaaaattcagtctttcctgttgtttacttattactcagc 1753
                ||||||||||||||||||||| ||||||||||| |||||
Sbjct: 74946990 gaaaattcagtctttcctgttatttacttattaatcagc 74947028



 Score =  224 bits (113), Expect = 1e-55
 Identities = 185/209 (88%)
 Strand = Plus / Minus

                                                                             
Query: 1544      cggcgcagttccaagggtaggtttagaaatagggaaaggggcttacccagtggcacagtt 1603
                 |||| ||||||| |||| ||||||||||||||||||| |||||||||  |||||||||||
Sbjct: 111484314 cggcacagttccgagggcaggtttagaaatagggaaaagggcttaccaggtggcacagtt 111484255

                                                                             
Query: 1604      ccaagggcaagttataaaaataatgaggctcacctgctaacccgactacaacggcaacaa 1663
                 || |||||||||| |||||| | ||||||||||||||||||||||| |||| ||||||||
Sbjct: 111484254 ccgagggcaagttctaaaaacagtgaggctcacctgctaacccgacaacaatggcaacaa 111484195

                                                                             
Query: 1664      taacaaaacgaaggttttgcacaatagtgcaagaataaaaattgcttcttggaaaattca 1723
                 |||||||| ||||| ||||||||| ||| |||||||  ||||  ||||||||||||||||
Sbjct: 111484194 taacaaaatgaaggctttgcacaacagtacaagaatggaaatctcttcttggaaaattca 111484135

                                              
Query: 1724      gtctttcctgttgtttacttattactcag 1752
                 |||||||||| | | ||||||||| ||||
Sbjct: 111484134 gtctttcctgctatctacttattattcag 111484106



 Score =  224 bits (113), Expect = 1e-55
 Identities = 185/209 (88%)
 Strand = Plus / Plus

                                                                             
Query: 1544      cggcgcagttccaagggtaggtttagaaatagggaaaggggcttacccagtggcacagtt 1603
                 |||| ||||||| |||| ||||||||||||||||||| |||||||||  |||||||||||
Sbjct: 111569912 cggcacagttccgagggcaggtttagaaatagggaaaagggcttaccaggtggcacagtt 111569971

                                                                             
Query: 1604      ccaagggcaagttataaaaataatgaggctcacctgctaacccgactacaacggcaacaa 1663
                 || |||||||||| |||||| | ||||||||||||||||||||||| |||| ||||||||
Sbjct: 111569972 ccgagggcaagttctaaaaacagtgaggctcacctgctaacccgacaacaatggcaacaa 111570031

                                                                             
Query: 1664      taacaaaacgaaggttttgcacaatagtgcaagaataaaaattgcttcttggaaaattca 1723
                 |||||||| ||||| ||||||||| ||| |||||||  ||||  ||||||||||||||||
Sbjct: 111570032 taacaaaatgaaggctttgcacaacagtacaagaatggaaatctcttcttggaaaattca 111570091

                                              
Query: 1724      gtctttcctgttgtttacttattactcag 1752
                 |||||||||| | | ||||||||| ||||
Sbjct: 111570092 gtctttcctgctatctacttattattcag 111570120



 Score =  218 bits (110), Expect = 9e-54
 Identities = 177/198 (89%), Gaps = 1/198 (0%)
 Strand = Plus / Minus

                                                                             
Query: 1557      agggtaggtttagaaatagggaaaggggcttacccagtggcacagttccaagggcaagtt 1616
                 |||| ||||||||||||| ||||| |||||||||  |||||||||||||||||||||| |
Sbjct: 312262679 agggcaggtttagaaatacggaaaagggcttacctggtggcacagttccaagggcaagct 312262620

                                                                             
Query: 1617      ataaaaataatgaggctcacctgctaacccgactacaacggcaacaataacaaaacgaag 1676
                  |||||| ||||||||||||||||||||||||| |||| |||||||| ||||||| ||||
Sbjct: 312262619 ctaaaaacaatgaggctcacctgctaacccgacaacaatggcaacaacaacaaaatgaag 312262560

                                                                             
Query: 1677      gttttgcacaatagtgcaagaataaaaattgcttcttggaaaattcagtctttcctgttg 1736
                 | ||||||||| ||||||||||||||| | ||||||| ||||| ||||||||||||||| 
Sbjct: 312262559 gctttgcacaacagtgcaagaataaaagtcgcttctt-gaaaaatcagtctttcctgtta 312262501

                                   
Query: 1737      tttacttattactcagcc 1754
                 || |||||||| ||||||
Sbjct: 312262500 ttaacttattattcagcc 312262483



 Score =  206 bits (104), Expect = 3e-50
 Identities = 191/220 (86%)
 Strand = Plus / Plus

                                                                             
Query: 1533      agcctacccaccggcgcagttccaagggtaggtttagaaatagggaaaggggcttaccca 1592
                 ||||||| ||| ||| ||||||||||||||| |||||||||||||||| | ||||| |||
Sbjct: 312009779 agcctactcactggcacagttccaagggtagatttagaaatagggaaaagtgcttatcca 312009838

                                                                             
Query: 1593      gtggcacagttccaagggcaagttataaaaataatgaggctcacctgctaacccgactac 1652
                 | ||||||||||| |||||||| | |||||| |||||||||||||||||||||| || ||
Sbjct: 312009839 gaggcacagttccgagggcaaggtctaaaaacaatgaggctcacctgctaacccaacaac 312009898

                                                                             
Query: 1653      aacggcaacaataacaaaacgaaggttttgcacaatagtgcaagaataaaaattgcttct 1712
                 || ||||||||| |||||| | ||| ||||||||| ||||||||| |  |||| ||||||
Sbjct: 312009899 aatggcaacaatgacaaaatgcaggctttgcacaacagtgcaagagtggaaatcgcttct 312009958

                                                         
Query: 1713      tggaaaattcagtctttcctgttgtttacttattactcag 1752
                 |||||||||||||||||| | |  ||||||||||| ||||
Sbjct: 312009959 tggaaaattcagtctttcttctcatttacttattattcag 312009998



 Score =  167 bits (84), Expect = 3e-38
 Identities = 108/116 (93%)
 Strand = Plus / Plus

                                                                            
Query: 1442     ctgcggggagccgaggaaacacaggaggccaaggaagggaactagcctgacggcacagtt 1501
                ||||||||||||||||| | |||||||||||||||||||||||||||||||||||| |||
Sbjct: 74946767 ctgcggggagccgaggagatacaggaggccaaggaagggaactagcctgacggcaccgtt 74946826

                                                                        
Query: 1502     ccaaaggcagggttcctaaccaagggaaaagagcctacccaccggcgcagttccaa 1557
                || |||||||||||||||||||||| |||| |||||||||||||||  ||||||||
Sbjct: 74946827 ccgaaggcagggttcctaaccaaggaaaaaaagcctacccaccggcatagttccaa 74946882



 Score =  159 bits (80), Expect = 7e-36
 Identities = 174/204 (85%), Gaps = 1/204 (0%)
 Strand = Plus / Plus

                                                                             
Query: 1549      cagttccaagggtaggtttagaaatagggaaaggggcttacccagtggcacagttccaag 1608
                 ||||||||||||||| |||||||||||||||| | | ||| |||| |||| |||||| ||
Sbjct: 311793994 cagttccaagggtagatttagaaatagggaaaagtgtttatccagaggcagagttccgag 311794053

                                                                             
Query: 1609      ggcaagttataaaaataatgaggctcacctgctaacccgactacaacggcaacaataaca 1668
                 |||||| | |||||| |||||||||||||||||||||| || | || ||||||||| |||
Sbjct: 311794054 ggcaaggtctaaaaacaatgaggctcacctgctaacccaac-ataatggcaacaatgaca 311794112

                                                                             
Query: 1669      aaacgaaggttttgcacaatagtgcaagaataaaaattgcttcttggaaaattcagtctt 1728
                 ||| | ||| ||||||||| ||||||||| |  |||| |||||||| |||||||||||||
Sbjct: 311794113 aaatgcaggctttgcacaacagtgcaagagtggaaatcgcttcttgtaaaattcagtctt 311794172

                                         
Query: 1729      tcctgttgtttacttattactcag 1752
                 || | |  ||||||||||| ||||
Sbjct: 311794173 tcttctcatttacttattattcag 311794196



 Score =  115 bits (58), Expect = 9e-23
 Identities = 77/82 (93%), Gaps = 1/82 (1%)
 Strand = Plus / Minus

                                                                            
Query: 1839     gagtttcaccttggtgaaattccccctattcaaatctaatacaagcaaaaac-aagtgtt 1897
                |||||||||||||||||||||||||||||||| ||||||| ||||||||||| |||||||
Sbjct: 63443871 gagtttcaccttggtgaaattccccctattcagatctaatgcaagcaaaaacaaagtgtt 63443812

                                      
Query: 1898     cactggtttgttaccagtaaaa 1919
                || ||||||||||| |||||||
Sbjct: 63443811 cattggtttgttacaagtaaaa 63443790



 Score =  103 bits (52), Expect = 4e-19
 Identities = 74/80 (92%), Gaps = 1/80 (1%)
 Strand = Plus / Minus

                                                                             
Query: 1839      gagtttcaccttggtgaaattccccctattcaaatctaatacaagcaaaaac-aagtgtt 1897
                 |||||||||||||||||||||||||||||||| |||||||  |||||||||| |||||||
Sbjct: 100438975 gagtttcaccttggtgaaattccccctattcagatctaatgaaagcaaaaacaaagtgtt 100438916

                                     
Query: 1898      cactggtttgttaccagtaa 1917
                 || ||||||||||| |||||
Sbjct: 100438915 cattggtttgttacaagtaa 100438896



 Score =  101 bits (51), Expect = 1e-18
 Identities = 73/79 (92%), Gaps = 1/79 (1%)
 Strand = Plus / Minus

                                                                            
Query: 1842     tttcaccttggtgaaattccccctattcaaatctaatacaagcaaaaac-aagtgttcac 1900
                ||||||||||||||||||||||||||||| |||||||  |||||||||| ||||||||||
Sbjct: 63877244 tttcaccttggtgaaattccccctattcagatctaatgtaagcaaaaacaaagtgttcac 63877185

                                   
Query: 1901     tggtttgttaccagtaaaa 1919
                || |||||||| |||||||
Sbjct: 63877184 tgttttgttacaagtaaaa 63877166



 Score = 95.6 bits (48), Expect = 9e-17
 Identities = 73/80 (91%), Gaps = 1/80 (1%)
 Strand = Plus / Minus

                                                                             
Query: 1839      gagtttcaccttggtgaaattccccctattcaaatctaatacaagcaaaaac-aagtgtt 1897
                 |||||||||| ||||||||| ||||||||||| |||||||  |||||||||| |||||||
Sbjct: 311931470 gagtttcaccctggtgaaatcccccctattcagatctaatgtaagcaaaaacaaagtgtt 311931411

                                     
Query: 1898      cactggtttgttaccagtaa 1917
                 |||||||||||||| |||||
Sbjct: 311931410 cactggtttgttacaagtaa 311931391



 Score = 83.8 bits (42), Expect = 3e-13
 Identities = 73/82 (89%), Gaps = 1/82 (1%)
 Strand = Plus / Plus

                                                                             
Query: 1839      gagtttcaccttggtgaaattccccctattcaaatctaatacaagcaaaaac-aagtgtt 1897
                 |||||||||| |||||||||||||||| |||| ||||| | | ||||||||| |||||||
Sbjct: 311916474 gagtttcaccctggtgaaattccccctcttcagatctagtgctagcaaaaacaaagtgtt 311916533

                                       
Query: 1898      cactggtttgttaccagtaaaa 1919
                 || ||||||||||| |||||||
Sbjct: 311916534 cattggtttgttacaagtaaaa 311916555



 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 39/40 (97%)
 Strand = Plus / Plus

                                                        
Query: 1839     gagtttcaccttggtgaaattccccctattcaaatctaat 1878
                |||||||||||||||||||||||||||||||| |||||||
Sbjct: 74947129 gagtttcaccttggtgaaattccccctattcagatctaat 74947168



 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 63/72 (87%)
 Strand = Plus / Minus

                                                                             
Query: 1441      actgcggggagccgaggaaacacaggaggccaaggaagggaactagcctgacggcacagt 1500
                 ||||| ||||||| |||| |  ||||||||||||||| ||||||||||| ||||||||||
Sbjct: 111484365 actgcagggagccaaggagatgcaggaggccaaggaaaggaactagcctaacggcacagt 111484306

                             
Query: 1501      tccaaaggcagg 1512
                 ||| | ||||||
Sbjct: 111484305 tccgagggcagg 111484294



 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 63/72 (87%)
 Strand = Plus / Plus

                                                                             
Query: 1441      actgcggggagccgaggaaacacaggaggccaaggaagggaactagcctgacggcacagt 1500
                 ||||| ||||||| |||| |  ||||||||||||||| ||||||||||| ||||||||||
Sbjct: 111569861 actgcagggagccaaggagatgcaggaggccaaggaaaggaactagcctaacggcacagt 111569920

                             
Query: 1501      tccaaaggcagg 1512
                 ||| | ||||||
Sbjct: 111569921 tccgagggcagg 111569932



 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 58/66 (87%)
 Strand = Plus / Minus

                                                                             
Query: 1447      gggagccgaggaaacacaggaggccaaggaagggaactagcctgacggcacagttccaaa 1506
                 |||||||||||| |  || |||||||||||||||||||||||||| ||||||| ||| | 
Sbjct: 312262737 gggagccgaggagatgcaagaggccaaggaagggaactagcctgatggcacagctccgag 312262678

                       
Query: 1507      ggcagg 1512
                 ||||||
Sbjct: 312262677 ggcagg 312262672



 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 36/37 (97%)
 Strand = Plus / Minus

                                                      
Query: 1842      tttcaccttggtgaaattccccctattcaaatctaat 1878
                 ||||||||||||| |||||||||||||||||||||||
Sbjct: 111484004 tttcaccttggtggaattccccctattcaaatctaat 111483968



 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 36/37 (97%)
 Strand = Plus / Plus

                                                      
Query: 1842      tttcaccttggtgaaattccccctattcaaatctaat 1878
                 ||||||||||||| |||||||||||||||||||||||
Sbjct: 111570222 tttcaccttggtggaattccccctattcaaatctaat 111570258



 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 47/52 (90%)
 Strand = Plus / Plus

                                                                    
Query: 1701     aaaattgcttcttggaaaattcagtctttcctgttgtttacttattactcag 1752
                ||||| ||||||||||||| ||||||||| ||||| ||||||||||| ||||
Sbjct: 83403761 aaaatcgcttcttggaaaaatcagtcttttctgttatttacttattattcag 83403812


>Sscrofa_Chr09 
||          Length = 153670197

 Score =  398 bits (201), Expect = e-108
 Identities = 285/313 (91%)
 Strand = Plus / Minus

                                                                             
Query: 1442      ctgcggggagccgaggaaacacaggaggccaaggaagggaactagcctgacggcacagtt 1501
                 |||||||||||| |||| |  |||||||||||||||||||||||||||||||||||||||
Sbjct: 115371598 ctgcggggagccaaggagatccaggaggccaaggaagggaactagcctgacggcacagtt 115371539

                                                                             
Query: 1502      ccaaaggcagggttcctaaccaagggaaaagagcctacccaccggcgcagttccaagggt 1561
                 |  |||||||||||||||||  ||| |||| ||||||||  | ||| ||||||  |||| 
Sbjct: 115371538 ctgaaggcagggttcctaacagaggaaaaaaagcctacctgctggcacagttctgagggc 115371479

                                                                             
Query: 1562      aggtttagaaatagggaaaggggcttacccagtggcacagttccaagggcaagttataaa 1621
                 ||||||||||||||||||| |||||||||| ||||| |||||||||||||||||| ||||
Sbjct: 115371478 aggtttagaaatagggaaaagggcttaccctgtggcccagttccaagggcaagttctaaa 115371419

                                                                             
Query: 1622      aataatgaggctcacctgctaacccgactacaacggcaacaataacaaaacgaaggtttt 1681
                 |||||||||||||||||||||||| ||| |||||||||||||| |||||| ||||| |||
Sbjct: 115371418 aataatgaggctcacctgctaacctgacaacaacggcaacaatcacaaaatgaaggcttt 115371359

                                                                             
Query: 1682      gcacaatagtgcaagaataaaaattgcttcttggaaaattcagtctttcctgttgtttac 1741
                 |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 115371358 gcacaatagtgcaagaataaaaattgcttcttggaaaattcagtctttcctgttatttac 115371299

                              
Query: 1742      ttattactcagcc 1754
                 |||||||| ||||
Sbjct: 115371298 ttattacttagcc 115371286



 Score =  335 bits (169), Expect = 5e-89
 Identities = 272/305 (89%), Gaps = 1/305 (0%)
 Strand = Plus / Minus

                                                                             
Query: 1443      tgcggggagccgaggaaacacaggaggccaaggaagggaactagcctgacggcacagttc 1502
                 |||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||
Sbjct: 102864981 tgcggggagccgaggagatgcaggaggccaaggaagggaactagcctgacggcacagttc 102864922

                                                                             
Query: 1503      caaaggcagggttcctaaccaagggaaaagagcctacccaccggcgcagttccaagggta 1562
                   ||||||| |||||||||| ||| |||| ||||| ||| || || |||||||||||| |
Sbjct: 102864921 tgaaggcagcgttcctaaccgaggaaaaaaagcctccccgccagcacagttccaagggca 102864862

                                                                             
Query: 1563      ggtttagaaatagggaaaggggcttacccagtggcacagttccaagggcaagttataaaa 1622
                 |||||||||||||||||| |||||||||| ||||||||||||| |||||||||| |||||
Sbjct: 102864861 ggtttagaaatagggaaaagggcttacccggtggcacagttccgagggcaagttctaaaa 102864802

                                                                             
Query: 1623      ataatgaggctcacctgctaacccgactacaacggcaacaataacaaaacgaaggttttg 1682
                 ||||||||||||||||||||||| ||| | || ||| |||||||||||| ||||| ||||
Sbjct: 102864801 ataatgaggctcacctgctaacctgacaagaatggctacaataacaaaatgaaggctttg 102864742

                                                                             
Query: 1683      cacaatagtgcaagaataaaaattgcttcttggaaaattcagtctttcctgttgtttact 1742
                 ||||| ||||||||||| ||||| ||||||||||||| |||||||||| ||   ||||||
Sbjct: 102864741 cacaacagtgcaagaat-aaaatcgcttcttggaaaaatcagtctttcttgccatttact 102864683

                      
Query: 1743      tatta 1747
                 |||||
Sbjct: 102864682 tatta 102864678



 Score =  252 bits (127), Expect = 6e-64
 Identities = 188/207 (90%), Gaps = 1/207 (0%)
 Strand = Plus / Plus

                                                                             
Query: 1549      cagttccaagggtaggtttagaaatagggaaaggggcttacccagtggcacagttccaag 1608
                 ||||||| |||| |||||||||||||||||||||||||||||  | ||| ||||||||||
Sbjct: 149186308 cagttccgagggcaggtttagaaatagggaaaggggcttacctggcggcccagttccaag 149186367

                                                                             
Query: 1609      ggcaagttataaaaataatgaggctcacctgctaacccgactacaacggcaacaataaca 1668
                 |||||||| ||||||||||||||||||||||||||||| || ||||| ||||||||||||
Sbjct: 149186368 ggcaagttctaaaaataatgaggctcacctgctaacccaacaacaacagcaacaataaca 149186427

                                                                             
Query: 1669      aaacgaaggttttgcacaatagtgcaagaat-aaaaattgcttcttggaaaattcagtct 1727
                 ||| ||||| | ||||||||||||||||||| ||||||  ||||||||||||||||||||
Sbjct: 149186428 aaatgaaggctctgcacaatagtgcaagaataaaaaatcacttcttggaaaattcagtct 149186487

                                            
Query: 1728      ttcctgttgtttacttattactcagcc 1754
                 |||||||| ||||| ||| ||||||||
Sbjct: 149186488 ttcctgttatttacctataactcagcc 149186514



 Score =  224 bits (113), Expect = 1e-55
 Identities = 170/189 (89%)
 Strand = Plus / Minus

                                                                            
Query: 1446     ggggagccgaggaaacacaggaggccaaggaagggaactagcctgacggcacagttccaa 1505
                ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 54914358 ggggagccgaggagatacaggaggccaaggaagggaactagcctgacggcacagttccta 54914299

                                                                            
Query: 1506     aggcagggttcctaaccaagggaaaagagcctacccaccggcgcagttccaagggtaggt 1565
                ||||||||| ||||||| ||| |||| ||||||||| || || ||||||  |||| ||||
Sbjct: 54914298 aggcagggtacctaaccgaggaaaaaaagcctacccgccagcacagttctgagggcaggt 54914239

                                                                            
Query: 1566     ttagaaatagggaaaggggcttacccagtggcacagttccaagggcaagttataaaaata 1625
                ||||||| ||||||| |||||||||| | ||||||||||| |||||||||| ||||||||
Sbjct: 54914238 ttagaaacagggaaaagggcttacccggcggcacagttccgagggcaagttctaaaaata 54914179

                         
Query: 1626     atgaggctc 1634
                |||||||||
Sbjct: 54914178 atgaggctc 54914170



 Score =  186 bits (94), Expect = 3e-44
 Identities = 126/136 (92%), Gaps = 3/136 (2%)
 Strand = Plus / Minus

                                                                            
Query: 1619     aaaaataatgaggctcacctgctaacccgactacaacggcaacaataacaaaacgaaggt 1678
                ||||| || ||||||||||||||||||||||   |||| ||||||||| |||| ||||| 
Sbjct: 54913908 aaaaaaaaagaggctcacctgctaacccgac---aacgacaacaataataaaatgaaggc 54913852

                                                                            
Query: 1679     tttgcacaatagtgcaagaataaaaattgcttcttggaaaattcagtctttcctgttgtt 1738
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 54913851 tttgcacaatagtgcaagaataaaaattgcttcttggaaaattcagtctttcctgttatt 54913792

                                
Query: 1739     tacttattactcagcc 1754
                ||||||||||||||||
Sbjct: 54913791 tacttattactcagcc 54913776



 Score =  182 bits (92), Expect = 5e-43
 Identities = 158/180 (87%)
 Strand = Plus / Minus

                                                                           
Query: 1549    cagttccaagggtaggtttagaaatagggaaaggggcttacccagtggcacagttccaag 1608
               ||||||| | || ||||||||||||||||||| |||||||||  | ||||||||||  ||
Sbjct: 2334855 cagttccgaaggcaggtttagaaatagggaaaagggcttacctggcggcacagttctgag 2334796

                                                                           
Query: 1609    ggcaagttataaaaataatgaggctcacctgctaacccgactacaacggcaacaataaca 1668
               |||||||| |||||||||||||||| |||||||||||| || |||| ||| |||||||||
Sbjct: 2334795 ggcaagttctaaaaataatgaggcttacctgctaacccaacaacaatggctacaataaca 2334736

                                                                           
Query: 1669    aaacgaaggttttgcacaatagtgcaagaataaaaattgcttcttggaaaattcagtctt 1728
               ||| ||||| ||||||||| |||||| ||||||||||  |||||||||||| ||||||||
Sbjct: 2334735 aaatgaaggctttgcacaacagtgcaggaataaaaatcacttcttggaaaaatcagtctt 2334676



 Score =  123 bits (62), Expect = 4e-25
 Identities = 78/82 (95%), Gaps = 1/82 (1%)
 Strand = Plus / Plus

                                                                             
Query: 1839      gagtttcaccttggtgaaattccccctattcaaatctaatacaagcaaaaac-aagtgtt 1897
                 |||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||
Sbjct: 149186615 gagtttcaccttggtgaaattccccctattcagatctaatacaagcaaaaacaaagtgtt 149186674

                                       
Query: 1898      cactggtttgttaccagtaaaa 1919
                 || ||||||||||| |||||||
Sbjct: 149186675 cattggtttgttacaagtaaaa 149186696



 Score =  121 bits (61), Expect = 2e-24
 Identities = 80/85 (94%), Gaps = 1/85 (1%)
 Strand = Plus / Minus

                                                                            
Query: 1836     aatgagtttcaccttggtgaaattccccctattcaaatctaatacaagcaaaaac-aagt 1894
                ||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| ||||
Sbjct: 54913694 aatgagtttcaccttggtgaaattccccctattcagatctaatgcaagcaaaaacaaagt 54913635

                                         
Query: 1895     gttcactggtttgttaccagtaaaa 1919
                ||||| ||||||||||| |||||||
Sbjct: 54913634 gttcattggtttgttacaagtaaaa 54913610



 Score =  103 bits (52), Expect = 4e-19
 Identities = 74/80 (92%), Gaps = 1/80 (1%)
 Strand = Plus / Minus

                                                                             
Query: 1839      gagtttcaccttggtgaaattccccctattcaaatctaatacaagcaaaaac-aagtgtt 1897
                 |||||||||||||||||||||||||||||||| |||||||  |||||||||| |||||||
Sbjct: 115371185 gagtttcaccttggtgaaattccccctattcagatctaatgtaagcaaaaacaaagtgtt 115371126

                                     
Query: 1898      cactggtttgttaccagtaa 1917
                 || ||||||||||| |||||
Sbjct: 115371125 cattggtttgttacaagtaa 115371106



 Score = 95.6 bits (48), Expect = 9e-17
 Identities = 66/72 (91%)
 Strand = Plus / Plus

                                                                             
Query: 1441      actgcggggagccgaggaaacacaggaggccaaggaagggaactagcctgacggcacagt 1500
                 ||||||||||||| |||| | ||||||||||||||||||||||||||||||| |||||||
Sbjct: 149186252 actgcggggagccaaggagatacaggaggccaaggaagggaactagcctgacagcacagt 149186311

                             
Query: 1501      tccaaaggcagg 1512
                 ||| | ||||||
Sbjct: 149186312 tccgagggcagg 149186323



 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 72/80 (90%), Gaps = 1/80 (1%)
 Strand = Plus / Minus

                                                                             
Query: 1839      gagtttcaccttggtgaaattccccctattcaaatctaatacaagcaaaaac-aagtgtt 1897
                 ||||||||||||| |||||||||||||||||| |||||||  |||||||||| |||||||
Sbjct: 102864573 gagtttcaccttgatgaaattccccctattcagatctaatgtaagcaaaaacaaagtgtt 102864514

                                     
Query: 1898      cactggtttgttaccagtaa 1917
                 |  ||||||||||| |||||
Sbjct: 102864513 cgttggtttgttacaagtaa 102864494



 Score = 85.7 bits (43), Expect = 8e-14
 Identities = 64/71 (90%)
 Strand = Plus / Minus

                                                                           
Query: 1442    ctgcggggagccgaggaaacacaggaggccaaggaagggaactagcctgacggcacagtt 1501
               |||||||||||| |||| |  ||||||||||||||||||||||||| |||| ||||||||
Sbjct: 2334910 ctgcggggagccaaggagatgcaggaggccaaggaagggaactagcttgacagcacagtt 2334851

                          
Query: 1502    ccaaaggcagg 1512
               || ||||||||
Sbjct: 2334850 ccgaaggcagg 2334840


  Database: Sscrofa_10.2.fasta
    Posted date:  Nov 16, 2011 10:34 AM
  Number of letters in database: 2,808,509,378
  Number of sequences in database:  4582
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 51,361,405
Number of extensions: 957
Number of successful extensions: 957
Number of sequences better than 1.0e-05: 25
Number of HSP's gapped: 828
Number of HSP's successfully gapped: 265
Length of query: 1919
Length of database: 2,808,509,378
Length adjustment: 22
Effective length of query: 1897
Effective length of database: 2,808,408,574
Effective search space: 5327551064878
Effective search space used: 5327551064878
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)