Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-000686
(1408 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001092554.1| mortality factor 4-like protein 2 [Bos tauru... 560 e-160
Alignment gi|NP_001030525.1| mortality factor 4-like protein 1 [Bos tauru... 390 e-108
Alignment gi|NP_001179333.1| male-specific lethal 3 homolog [Bos taurus]. 50 4e-06
Alignment gi|XP_002700487.1| PREDICTED: male-specific lethal 3 homolog (D... 50 4e-06
Alignment gi|XP_002700486.1| PREDICTED: male-specific lethal 3 homolog (D... 50 4e-06
Alignment gi|XP_002707478.1| PREDICTED: male-specific lethal 3 homolog (D... 50 4e-06
>ref|NP_001092554.1| mortality factor 4-like protein 2 [Bos taurus].
Length = 287
Score = 560 bits (1444), Expect = e-160
Identities = 280/288 (97%), Positives = 283/288 (98%)
Frame = +3
Query: 492 MSSRKQGSQTRGQQSAEEDNFKKPTRSNMQRSKMRGASSGKKTAGPQQKNLEAALPGRWG 671
MSSRKQGSQTRG QSAEEDNFKKPTRSNMQRSKMRG SSGKKTAGPQQKNLEAALPGRWG
Sbjct: 1 MSSRKQGSQTRGHQSAEEDNFKKPTRSNMQRSKMRG-SSGKKTAGPQQKNLEAALPGRWG 59
Query: 672 GRSAETPPSGSVRKTRKNKQKTPGNGDGGSTSEAPQPPRKKRARADPTVESEEAFKNRME 851
GRSAE PPSGSVRKTR+NKQKTPGNGDGGSTSEAPQPPRKKRARADPTVESE+AFKNRME
Sbjct: 60 GRSAENPPSGSVRKTRRNKQKTPGNGDGGSTSEAPQPPRKKRARADPTVESEDAFKNRME 119
Query: 852 VKVKIPEELKPWLVEDWDLVTRQKQLFQLPAKKNVDAILEEYANCKKSQGNVDNKEYAVN 1031
VKVKIPEELKPWLVEDWDLVTRQKQLFQLPAKKNVD ILEEYANCK+SQGNVDNKEYAVN
Sbjct: 120 VKVKIPEELKPWLVEDWDLVTRQKQLFQLPAKKNVDTILEEYANCKRSQGNVDNKEYAVN 179
Query: 1032 EVVAGIKEYFNVMLGTQLLYKFERPQYAEILLAHPDAPMSQVYGAPHLLRLFVRIGAMLA 1211
EVV GIKEYFNVMLGTQLLYKFERPQYAEILLAHPDAPMSQVYGAPHLLRLFVRIGAMLA
Sbjct: 180 EVVGGIKEYFNVMLGTQLLYKFERPQYAEILLAHPDAPMSQVYGAPHLLRLFVRIGAMLA 239
Query: 1212 YTPLDEKSLALLLGYLHDFLKYLAKNAASLFTASDYKVASAEYHRKAL 1355
YTPLDEKSLALLLGYLHDFLKYLAKNAASLFTASDYKVASAEYHRKAL
Sbjct: 240 YTPLDEKSLALLLGYLHDFLKYLAKNAASLFTASDYKVASAEYHRKAL 287
>ref|NP_001030525.1| mortality factor 4-like protein 1 [Bos taurus].
Length = 296
Score = 390 bits (1001), Expect = e-108
Identities = 189/216 (87%), Positives = 204/216 (94%)
Frame = +3
Query: 708 RKTRKNKQKTPGNGDGGSTSEAPQPPRKKRARADPTVESEEAFKNRMEVKVKIPEELKPW 887
+KT+KNKQKTPGNGDGGSTSE PQPPRKKRAR DPTVE+EE F +R+EVKVKIPEELKPW
Sbjct: 81 QKTKKNKQKTPGNGDGGSTSETPQPPRKKRARVDPTVENEETFMSRVEVKVKIPEELKPW 140
Query: 888 LVEDWDLVTRQKQLFQLPAKKNVDAILEEYANCKKSQGNVDNKEYAVNEVVAGIKEYFNV 1067
LV+DWDL+TRQKQLF LPAKKNVD+ILE+YAN KKS+GN DNKEYAVNEVVAGIKEYFNV
Sbjct: 141 LVDDWDLITRQKQLFYLPAKKNVDSILEDYANYKKSRGNTDNKEYAVNEVVAGIKEYFNV 200
Query: 1068 MLGTQLLYKFERPQYAEILLAHPDAPMSQVYGAPHLLRLFVRIGAMLAYTPLDEKSLALL 1247
MLGTQLLYKFERPQYAEIL HPDAPMSQVYGAPHLLRLFVRIGAMLAYTPLDEKSLALL
Sbjct: 201 MLGTQLLYKFERPQYAEILADHPDAPMSQVYGAPHLLRLFVRIGAMLAYTPLDEKSLALL 260
Query: 1248 LGYLHDFLKYLAKNAASLFTASDYKVASAEYHRKAL 1355
L YLHDFLKYLAKN+A+LF+ASDY+VA EYHRKA+
Sbjct: 261 LNYLHDFLKYLAKNSATLFSASDYEVAPPEYHRKAV 296
>ref|NP_001179333.1| male-specific lethal 3 homolog [Bos taurus].
Length = 520
Score = 50.4 bits (119), Expect = 4e-06
Identities = 29/67 (43%), Positives = 39/67 (58%)
Frame = +3
Query: 1143 PMSQVYGAPHLLRLFVRIGAMLAYTPLDEKSLALLLGYLHDFLKYLAKNAASLFTASDYK 1322
P S +YGA HLLRLFV++ +L EK+L LL + FL++LA+ F S Y
Sbjct: 445 PPSYIYGAQHLLRLFVKLPEILGKMSFSEKNLKALLKHFDLFLRFLAEYHDDFFPESAY- 503
Query: 1323 VASAEYH 1343
VA+ E H
Sbjct: 504 VAACEAH 510
>ref|XP_002700487.1| PREDICTED: male-specific lethal 3 homolog (Drosophila) isoform 2 [Bos
taurus].
Length = 461
Score = 50.4 bits (119), Expect = 4e-06
Identities = 29/67 (43%), Positives = 39/67 (58%)
Frame = +3
Query: 1143 PMSQVYGAPHLLRLFVRIGAMLAYTPLDEKSLALLLGYLHDFLKYLAKNAASLFTASDYK 1322
P S +YGA HLLRLFV++ +L EK+L LL + FL++LA+ F S Y
Sbjct: 386 PPSYIYGAQHLLRLFVKLPEILGKMSFSEKNLKALLKHFDLFLRFLAEYHDDFFPESAY- 444
Query: 1323 VASAEYH 1343
VA+ E H
Sbjct: 445 VAACEAH 451
>ref|XP_002700486.1| PREDICTED: male-specific lethal 3 homolog (Drosophila) isoform 1 [Bos
taurus].
Length = 520
Score = 50.4 bits (119), Expect = 4e-06
Identities = 29/67 (43%), Positives = 39/67 (58%)
Frame = +3
Query: 1143 PMSQVYGAPHLLRLFVRIGAMLAYTPLDEKSLALLLGYLHDFLKYLAKNAASLFTASDYK 1322
P S +YGA HLLRLFV++ +L EK+L LL + FL++LA+ F S Y
Sbjct: 445 PPSYIYGAQHLLRLFVKLPEILGKMSFSEKNLKALLKHFDLFLRFLAEYHDDFFPESAY- 503
Query: 1323 VASAEYH 1343
VA+ E H
Sbjct: 504 VAACEAH 510
>ref|XP_002707478.1| PREDICTED: male-specific lethal 3 homolog (Drosophila) [Bos taurus].
Length = 461
Score = 50.4 bits (119), Expect = 4e-06
Identities = 29/67 (43%), Positives = 39/67 (58%)
Frame = +3
Query: 1143 PMSQVYGAPHLLRLFVRIGAMLAYTPLDEKSLALLLGYLHDFLKYLAKNAASLFTASDYK 1322
P S +YGA HLLRLFV++ +L EK+L LL + FL++LA+ F S Y
Sbjct: 386 PPSYIYGAQHLLRLFVKLPEILGKMSFSEKNLKALLKHFDLFLRFLAEYHDDFFPESAY- 444
Query: 1323 VASAEYH 1343
VA+ E H
Sbjct: 445 VAACEAH 451
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 53,691,108
Number of extensions: 1446160
Number of successful extensions: 5151
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 5081
Number of HSP's successfully gapped: 6
Length of query: 469
Length of database: 17,681,374
Length adjustment: 106
Effective length of query: 363
Effective length of database: 14,174,046
Effective search space: 5145178698
Effective search space used: 5145178698
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-000686
(1408 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_862139.1| PREDICTED: similar to Mortality factor 4-like p... 572 e-163
Alignment gi|XP_538122.1| PREDICTED: similar to Mortality factor 4-like p... 572 e-163
Alignment gi|XP_852758.1| PREDICTED: similar to Mortality factor 4-like p... 409 e-116
Alignment gi|XP_548862.2| PREDICTED: similar to Male-specific lethal 3-li... 50 4e-06
>ref|XP_862139.1| PREDICTED: similar to Mortality factor 4-like protein 2 (MORF-related
gene X protein) (Transcription factor-like protein MRGX)
(MSL3-2 protein) isoform 2 [Canis familiaris].
Length = 288
Score = 572 bits (1473), Expect = e-163
Identities = 285/288 (98%), Positives = 285/288 (98%)
Frame = +3
Query: 492 MSSRKQGSQTRGQQSAEEDNFKKPTRSNMQRSKMRGASSGKKTAGPQQKNLEAALPGRWG 671
MSSRKQGSQTRGQQSAEEDNFKKPTRSNMQRSKMRGASSGKKTAGPQQKNLE ALPGRWG
Sbjct: 1 MSSRKQGSQTRGQQSAEEDNFKKPTRSNMQRSKMRGASSGKKTAGPQQKNLEPALPGRWG 60
Query: 672 GRSAETPPSGSVRKTRKNKQKTPGNGDGGSTSEAPQPPRKKRARADPTVESEEAFKNRME 851
GRSAE PPSGSVRKTRKNKQKTPGNGDGGSTSEAPQPPRKKRARADPTVESEEAFKNRME
Sbjct: 61 GRSAENPPSGSVRKTRKNKQKTPGNGDGGSTSEAPQPPRKKRARADPTVESEEAFKNRME 120
Query: 852 VKVKIPEELKPWLVEDWDLVTRQKQLFQLPAKKNVDAILEEYANCKKSQGNVDNKEYAVN 1031
VKVKIPEELKPWLVEDWDLVTRQKQLFQLPAKKNVDAILEEYANCKKSQGNVDNKEYAVN
Sbjct: 121 VKVKIPEELKPWLVEDWDLVTRQKQLFQLPAKKNVDAILEEYANCKKSQGNVDNKEYAVN 180
Query: 1032 EVVAGIKEYFNVMLGTQLLYKFERPQYAEILLAHPDAPMSQVYGAPHLLRLFVRIGAMLA 1211
EVVAGIKEYFNVMLGTQLLYKFERPQYAEILLAHPDAPMSQVYGAPHLLRLFVRIGAMLA
Sbjct: 181 EVVAGIKEYFNVMLGTQLLYKFERPQYAEILLAHPDAPMSQVYGAPHLLRLFVRIGAMLA 240
Query: 1212 YTPLDEKSLALLLGYLHDFLKYLAKNAASLFTASDYKVASAEYHRKAL 1355
YTPLDEKSLALLLGYLHDFLKYLAKNA SLFTASDYKVASAEYHRKAL
Sbjct: 241 YTPLDEKSLALLLGYLHDFLKYLAKNATSLFTASDYKVASAEYHRKAL 288
>ref|XP_538122.1| PREDICTED: similar to Mortality factor 4-like protein 2 (MORF-related
gene X protein) (Transcription factor-like protein MRGX)
(MSL3-2 protein) isoform 1 [Canis familiaris].
Length = 288
Score = 572 bits (1473), Expect = e-163
Identities = 285/288 (98%), Positives = 285/288 (98%)
Frame = +3
Query: 492 MSSRKQGSQTRGQQSAEEDNFKKPTRSNMQRSKMRGASSGKKTAGPQQKNLEAALPGRWG 671
MSSRKQGSQTRGQQSAEEDNFKKPTRSNMQRSKMRGASSGKKTAGPQQKNLE ALPGRWG
Sbjct: 1 MSSRKQGSQTRGQQSAEEDNFKKPTRSNMQRSKMRGASSGKKTAGPQQKNLEPALPGRWG 60
Query: 672 GRSAETPPSGSVRKTRKNKQKTPGNGDGGSTSEAPQPPRKKRARADPTVESEEAFKNRME 851
GRSAE PPSGSVRKTRKNKQKTPGNGDGGSTSEAPQPPRKKRARADPTVESEEAFKNRME
Sbjct: 61 GRSAENPPSGSVRKTRKNKQKTPGNGDGGSTSEAPQPPRKKRARADPTVESEEAFKNRME 120
Query: 852 VKVKIPEELKPWLVEDWDLVTRQKQLFQLPAKKNVDAILEEYANCKKSQGNVDNKEYAVN 1031
VKVKIPEELKPWLVEDWDLVTRQKQLFQLPAKKNVDAILEEYANCKKSQGNVDNKEYAVN
Sbjct: 121 VKVKIPEELKPWLVEDWDLVTRQKQLFQLPAKKNVDAILEEYANCKKSQGNVDNKEYAVN 180
Query: 1032 EVVAGIKEYFNVMLGTQLLYKFERPQYAEILLAHPDAPMSQVYGAPHLLRLFVRIGAMLA 1211
EVVAGIKEYFNVMLGTQLLYKFERPQYAEILLAHPDAPMSQVYGAPHLLRLFVRIGAMLA
Sbjct: 181 EVVAGIKEYFNVMLGTQLLYKFERPQYAEILLAHPDAPMSQVYGAPHLLRLFVRIGAMLA 240
Query: 1212 YTPLDEKSLALLLGYLHDFLKYLAKNAASLFTASDYKVASAEYHRKAL 1355
YTPLDEKSLALLLGYLHDFLKYLAKNA SLFTASDYKVASAEYHRKAL
Sbjct: 241 YTPLDEKSLALLLGYLHDFLKYLAKNATSLFTASDYKVASAEYHRKAL 288
>ref|XP_852758.1| PREDICTED: similar to Mortality factor 4-like protein 1 (MORF-related
gene 15 protein) (Transcription factor-like protein
MRG15) (Testis expressed protein 189) [Canis familiaris].
Length = 385
Score = 409 bits (1050), Expect(2) = e-116
Identities = 205/272 (75%), Positives = 225/272 (82%)
Frame = +3
Query: 540 EEDNFKKPTRSNMQRSKMRGASSGKKTAGPQQKNLEAALPGRWGGRSAETPPSGSVRKTR 719
++ +K + KMRGA+ GKKT+G QQKN+E KT+
Sbjct: 134 KQRELQKANQEQYAEGKMRGAAPGKKTSGLQQKNVEV--------------------KTK 173
Query: 720 KNKQKTPGNGDGGSTSEAPQPPRKKRARADPTVESEEAFKNRMEVKVKIPEELKPWLVED 899
KNKQKTPGNGDGGSTSE P PPRKKRAR DPTVE+EE F NR+EVKVKIPEELKPWLV+D
Sbjct: 174 KNKQKTPGNGDGGSTSETPPPPRKKRARVDPTVENEETFMNRVEVKVKIPEELKPWLVDD 233
Query: 900 WDLVTRQKQLFQLPAKKNVDAILEEYANCKKSQGNVDNKEYAVNEVVAGIKEYFNVMLGT 1079
WDL+TRQKQLF LPAKKNVD+ILE+YAN KKS+GN DNKEYAVNEVVAGIKEYFNVMLGT
Sbjct: 234 WDLITRQKQLFYLPAKKNVDSILEDYANYKKSRGNTDNKEYAVNEVVAGIKEYFNVMLGT 293
Query: 1080 QLLYKFERPQYAEILLAHPDAPMSQVYGAPHLLRLFVRIGAMLAYTPLDEKSLALLLGYL 1259
QLLYKFERPQYAEIL HPDAPMSQVYGAPHLLRLFVRIGAMLAYTPLDEKSLALLL YL
Sbjct: 294 QLLYKFERPQYAEILADHPDAPMSQVYGAPHLLRLFVRIGAMLAYTPLDEKSLALLLNYL 353
Query: 1260 HDFLKYLAKNAASLFTASDYKVASAEYHRKAL 1355
HDFLKYLAKN+A+LF+ASDY+VA EYHRKA+
Sbjct: 354 HDFLKYLAKNSATLFSASDYEVAPPEYHRKAV 385
Score = 31.2 bits (69), Expect(2) = e-116
Identities = 15/19 (78%), Positives = 16/19 (84%)
Frame = +1
Query: 490 E*VPESRVLKLVDNNLQKK 546
E VPESRVLK VD NLQK+
Sbjct: 117 EWVPESRVLKYVDTNLQKQ 135
>ref|XP_548862.2| PREDICTED: similar to Male-specific lethal 3-like 1 (MSL3-like 1)
(Male-specific lethal-3 homolog 1) [Canis familiaris].
Length = 522
Score = 50.4 bits (119), Expect = 4e-06
Identities = 29/67 (43%), Positives = 39/67 (58%)
Frame = +3
Query: 1143 PMSQVYGAPHLLRLFVRIGAMLAYTPLDEKSLALLLGYLHDFLKYLAKNAASLFTASDYK 1322
P S +YGA HLLRLFV++ +L EK+L LL + FL++LA+ F S Y
Sbjct: 447 PPSYIYGAQHLLRLFVKLPEILGKMSFSEKNLKALLKHFDLFLRFLAEYHDDFFPESAY- 505
Query: 1323 VASAEYH 1343
VA+ E H
Sbjct: 506 VAACEAH 512
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 56,179,202
Number of extensions: 1493123
Number of successful extensions: 5657
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 5558
Number of HSP's successfully gapped: 5
Length of query: 469
Length of database: 18,874,504
Length adjustment: 106
Effective length of query: 363
Effective length of database: 15,340,888
Effective search space: 5568742344
Effective search space used: 5568742344
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-000686
(1408 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_036418.1| mortality factor 4-like protein 2 [Homo sapiens]. 568 e-162
Alignment gi|NP_001135898.1| mortality factor 4-like protein 2 [Homo sapi... 568 e-162
Alignment gi|NP_001135897.1| mortality factor 4-like protein 2 [Homo sapi... 568 e-162
Alignment gi|NP_001135904.1| mortality factor 4-like protein 2 [Homo sapi... 568 e-162
Alignment gi|NP_001135903.1| mortality factor 4-like protein 2 [Homo sapi... 568 e-162
Alignment gi|NP_001135902.1| mortality factor 4-like protein 2 [Homo sapi... 568 e-162
Alignment gi|NP_001135901.1| mortality factor 4-like protein 2 [Homo sapi... 568 e-162
Alignment gi|NP_001135900.1| mortality factor 4-like protein 2 [Homo sapi... 568 e-162
Alignment gi|NP_001135899.1| mortality factor 4-like protein 2 [Homo sapi... 568 e-162
Alignment gi|NP_001135896.1| mortality factor 4-like protein 2 [Homo sapi... 568 e-162
>ref|NP_036418.1| mortality factor 4-like protein 2 [Homo sapiens].
Length = 288
Score = 568 bits (1464), Expect = e-162
Identities = 283/288 (98%), Positives = 285/288 (98%)
Frame = +3
Query: 492 MSSRKQGSQTRGQQSAEEDNFKKPTRSNMQRSKMRGASSGKKTAGPQQKNLEAALPGRWG 671
MSSRKQGSQ RGQQSAEE+NFKKPTRSNMQRSKMRGASSGKKTAGPQQKNLE ALPGRWG
Sbjct: 1 MSSRKQGSQPRGQQSAEEENFKKPTRSNMQRSKMRGASSGKKTAGPQQKNLEPALPGRWG 60
Query: 672 GRSAETPPSGSVRKTRKNKQKTPGNGDGGSTSEAPQPPRKKRARADPTVESEEAFKNRME 851
GRSAE PPSGSVRKTRKNKQKTPGNGDGGSTSEAPQPPRKKRARADPTVESEEAFKNRME
Sbjct: 61 GRSAENPPSGSVRKTRKNKQKTPGNGDGGSTSEAPQPPRKKRARADPTVESEEAFKNRME 120
Query: 852 VKVKIPEELKPWLVEDWDLVTRQKQLFQLPAKKNVDAILEEYANCKKSQGNVDNKEYAVN 1031
VKVKIPEELKPWLVEDWDLVTRQKQLFQLPAKKNVDAILEEYANCKKSQGNVDNKEYAVN
Sbjct: 121 VKVKIPEELKPWLVEDWDLVTRQKQLFQLPAKKNVDAILEEYANCKKSQGNVDNKEYAVN 180
Query: 1032 EVVAGIKEYFNVMLGTQLLYKFERPQYAEILLAHPDAPMSQVYGAPHLLRLFVRIGAMLA 1211
EVVAGIKEYFNVMLGTQLLYKFERPQYAEILLAHPDAPMSQVYGAPHLLRLFVRIGAMLA
Sbjct: 181 EVVAGIKEYFNVMLGTQLLYKFERPQYAEILLAHPDAPMSQVYGAPHLLRLFVRIGAMLA 240
Query: 1212 YTPLDEKSLALLLGYLHDFLKYLAKNAASLFTASDYKVASAEYHRKAL 1355
YTPLDEKSLALLLGYLHDFLKYLAKN+ASLFTASDYKVASAEYHRKAL
Sbjct: 241 YTPLDEKSLALLLGYLHDFLKYLAKNSASLFTASDYKVASAEYHRKAL 288
>ref|NP_001135898.1| mortality factor 4-like protein 2 [Homo sapiens].
Length = 288
Score = 568 bits (1464), Expect = e-162
Identities = 283/288 (98%), Positives = 285/288 (98%)
Frame = +3
Query: 492 MSSRKQGSQTRGQQSAEEDNFKKPTRSNMQRSKMRGASSGKKTAGPQQKNLEAALPGRWG 671
MSSRKQGSQ RGQQSAEE+NFKKPTRSNMQRSKMRGASSGKKTAGPQQKNLE ALPGRWG
Sbjct: 1 MSSRKQGSQPRGQQSAEEENFKKPTRSNMQRSKMRGASSGKKTAGPQQKNLEPALPGRWG 60
Query: 672 GRSAETPPSGSVRKTRKNKQKTPGNGDGGSTSEAPQPPRKKRARADPTVESEEAFKNRME 851
GRSAE PPSGSVRKTRKNKQKTPGNGDGGSTSEAPQPPRKKRARADPTVESEEAFKNRME
Sbjct: 61 GRSAENPPSGSVRKTRKNKQKTPGNGDGGSTSEAPQPPRKKRARADPTVESEEAFKNRME 120
Query: 852 VKVKIPEELKPWLVEDWDLVTRQKQLFQLPAKKNVDAILEEYANCKKSQGNVDNKEYAVN 1031
VKVKIPEELKPWLVEDWDLVTRQKQLFQLPAKKNVDAILEEYANCKKSQGNVDNKEYAVN
Sbjct: 121 VKVKIPEELKPWLVEDWDLVTRQKQLFQLPAKKNVDAILEEYANCKKSQGNVDNKEYAVN 180
Query: 1032 EVVAGIKEYFNVMLGTQLLYKFERPQYAEILLAHPDAPMSQVYGAPHLLRLFVRIGAMLA 1211
EVVAGIKEYFNVMLGTQLLYKFERPQYAEILLAHPDAPMSQVYGAPHLLRLFVRIGAMLA
Sbjct: 181 EVVAGIKEYFNVMLGTQLLYKFERPQYAEILLAHPDAPMSQVYGAPHLLRLFVRIGAMLA 240
Query: 1212 YTPLDEKSLALLLGYLHDFLKYLAKNAASLFTASDYKVASAEYHRKAL 1355
YTPLDEKSLALLLGYLHDFLKYLAKN+ASLFTASDYKVASAEYHRKAL
Sbjct: 241 YTPLDEKSLALLLGYLHDFLKYLAKNSASLFTASDYKVASAEYHRKAL 288
>ref|NP_001135897.1| mortality factor 4-like protein 2 [Homo sapiens].
Length = 288
Score = 568 bits (1464), Expect = e-162
Identities = 283/288 (98%), Positives = 285/288 (98%)
Frame = +3
Query: 492 MSSRKQGSQTRGQQSAEEDNFKKPTRSNMQRSKMRGASSGKKTAGPQQKNLEAALPGRWG 671
MSSRKQGSQ RGQQSAEE+NFKKPTRSNMQRSKMRGASSGKKTAGPQQKNLE ALPGRWG
Sbjct: 1 MSSRKQGSQPRGQQSAEEENFKKPTRSNMQRSKMRGASSGKKTAGPQQKNLEPALPGRWG 60
Query: 672 GRSAETPPSGSVRKTRKNKQKTPGNGDGGSTSEAPQPPRKKRARADPTVESEEAFKNRME 851
GRSAE PPSGSVRKTRKNKQKTPGNGDGGSTSEAPQPPRKKRARADPTVESEEAFKNRME
Sbjct: 61 GRSAENPPSGSVRKTRKNKQKTPGNGDGGSTSEAPQPPRKKRARADPTVESEEAFKNRME 120
Query: 852 VKVKIPEELKPWLVEDWDLVTRQKQLFQLPAKKNVDAILEEYANCKKSQGNVDNKEYAVN 1031
VKVKIPEELKPWLVEDWDLVTRQKQLFQLPAKKNVDAILEEYANCKKSQGNVDNKEYAVN
Sbjct: 121 VKVKIPEELKPWLVEDWDLVTRQKQLFQLPAKKNVDAILEEYANCKKSQGNVDNKEYAVN 180
Query: 1032 EVVAGIKEYFNVMLGTQLLYKFERPQYAEILLAHPDAPMSQVYGAPHLLRLFVRIGAMLA 1211
EVVAGIKEYFNVMLGTQLLYKFERPQYAEILLAHPDAPMSQVYGAPHLLRLFVRIGAMLA
Sbjct: 181 EVVAGIKEYFNVMLGTQLLYKFERPQYAEILLAHPDAPMSQVYGAPHLLRLFVRIGAMLA 240
Query: 1212 YTPLDEKSLALLLGYLHDFLKYLAKNAASLFTASDYKVASAEYHRKAL 1355
YTPLDEKSLALLLGYLHDFLKYLAKN+ASLFTASDYKVASAEYHRKAL
Sbjct: 241 YTPLDEKSLALLLGYLHDFLKYLAKNSASLFTASDYKVASAEYHRKAL 288
>ref|NP_001135904.1| mortality factor 4-like protein 2 [Homo sapiens].
Length = 288
Score = 568 bits (1464), Expect = e-162
Identities = 283/288 (98%), Positives = 285/288 (98%)
Frame = +3
Query: 492 MSSRKQGSQTRGQQSAEEDNFKKPTRSNMQRSKMRGASSGKKTAGPQQKNLEAALPGRWG 671
MSSRKQGSQ RGQQSAEE+NFKKPTRSNMQRSKMRGASSGKKTAGPQQKNLE ALPGRWG
Sbjct: 1 MSSRKQGSQPRGQQSAEEENFKKPTRSNMQRSKMRGASSGKKTAGPQQKNLEPALPGRWG 60
Query: 672 GRSAETPPSGSVRKTRKNKQKTPGNGDGGSTSEAPQPPRKKRARADPTVESEEAFKNRME 851
GRSAE PPSGSVRKTRKNKQKTPGNGDGGSTSEAPQPPRKKRARADPTVESEEAFKNRME
Sbjct: 61 GRSAENPPSGSVRKTRKNKQKTPGNGDGGSTSEAPQPPRKKRARADPTVESEEAFKNRME 120
Query: 852 VKVKIPEELKPWLVEDWDLVTRQKQLFQLPAKKNVDAILEEYANCKKSQGNVDNKEYAVN 1031
VKVKIPEELKPWLVEDWDLVTRQKQLFQLPAKKNVDAILEEYANCKKSQGNVDNKEYAVN
Sbjct: 121 VKVKIPEELKPWLVEDWDLVTRQKQLFQLPAKKNVDAILEEYANCKKSQGNVDNKEYAVN 180
Query: 1032 EVVAGIKEYFNVMLGTQLLYKFERPQYAEILLAHPDAPMSQVYGAPHLLRLFVRIGAMLA 1211
EVVAGIKEYFNVMLGTQLLYKFERPQYAEILLAHPDAPMSQVYGAPHLLRLFVRIGAMLA
Sbjct: 181 EVVAGIKEYFNVMLGTQLLYKFERPQYAEILLAHPDAPMSQVYGAPHLLRLFVRIGAMLA 240
Query: 1212 YTPLDEKSLALLLGYLHDFLKYLAKNAASLFTASDYKVASAEYHRKAL 1355
YTPLDEKSLALLLGYLHDFLKYLAKN+ASLFTASDYKVASAEYHRKAL
Sbjct: 241 YTPLDEKSLALLLGYLHDFLKYLAKNSASLFTASDYKVASAEYHRKAL 288
>ref|NP_001135903.1| mortality factor 4-like protein 2 [Homo sapiens].
Length = 288
Score = 568 bits (1464), Expect = e-162
Identities = 283/288 (98%), Positives = 285/288 (98%)
Frame = +3
Query: 492 MSSRKQGSQTRGQQSAEEDNFKKPTRSNMQRSKMRGASSGKKTAGPQQKNLEAALPGRWG 671
MSSRKQGSQ RGQQSAEE+NFKKPTRSNMQRSKMRGASSGKKTAGPQQKNLE ALPGRWG
Sbjct: 1 MSSRKQGSQPRGQQSAEEENFKKPTRSNMQRSKMRGASSGKKTAGPQQKNLEPALPGRWG 60
Query: 672 GRSAETPPSGSVRKTRKNKQKTPGNGDGGSTSEAPQPPRKKRARADPTVESEEAFKNRME 851
GRSAE PPSGSVRKTRKNKQKTPGNGDGGSTSEAPQPPRKKRARADPTVESEEAFKNRME
Sbjct: 61 GRSAENPPSGSVRKTRKNKQKTPGNGDGGSTSEAPQPPRKKRARADPTVESEEAFKNRME 120
Query: 852 VKVKIPEELKPWLVEDWDLVTRQKQLFQLPAKKNVDAILEEYANCKKSQGNVDNKEYAVN 1031
VKVKIPEELKPWLVEDWDLVTRQKQLFQLPAKKNVDAILEEYANCKKSQGNVDNKEYAVN
Sbjct: 121 VKVKIPEELKPWLVEDWDLVTRQKQLFQLPAKKNVDAILEEYANCKKSQGNVDNKEYAVN 180
Query: 1032 EVVAGIKEYFNVMLGTQLLYKFERPQYAEILLAHPDAPMSQVYGAPHLLRLFVRIGAMLA 1211
EVVAGIKEYFNVMLGTQLLYKFERPQYAEILLAHPDAPMSQVYGAPHLLRLFVRIGAMLA
Sbjct: 181 EVVAGIKEYFNVMLGTQLLYKFERPQYAEILLAHPDAPMSQVYGAPHLLRLFVRIGAMLA 240
Query: 1212 YTPLDEKSLALLLGYLHDFLKYLAKNAASLFTASDYKVASAEYHRKAL 1355
YTPLDEKSLALLLGYLHDFLKYLAKN+ASLFTASDYKVASAEYHRKAL
Sbjct: 241 YTPLDEKSLALLLGYLHDFLKYLAKNSASLFTASDYKVASAEYHRKAL 288
>ref|NP_001135902.1| mortality factor 4-like protein 2 [Homo sapiens].
Length = 288
Score = 568 bits (1464), Expect = e-162
Identities = 283/288 (98%), Positives = 285/288 (98%)
Frame = +3
Query: 492 MSSRKQGSQTRGQQSAEEDNFKKPTRSNMQRSKMRGASSGKKTAGPQQKNLEAALPGRWG 671
MSSRKQGSQ RGQQSAEE+NFKKPTRSNMQRSKMRGASSGKKTAGPQQKNLE ALPGRWG
Sbjct: 1 MSSRKQGSQPRGQQSAEEENFKKPTRSNMQRSKMRGASSGKKTAGPQQKNLEPALPGRWG 60
Query: 672 GRSAETPPSGSVRKTRKNKQKTPGNGDGGSTSEAPQPPRKKRARADPTVESEEAFKNRME 851
GRSAE PPSGSVRKTRKNKQKTPGNGDGGSTSEAPQPPRKKRARADPTVESEEAFKNRME
Sbjct: 61 GRSAENPPSGSVRKTRKNKQKTPGNGDGGSTSEAPQPPRKKRARADPTVESEEAFKNRME 120
Query: 852 VKVKIPEELKPWLVEDWDLVTRQKQLFQLPAKKNVDAILEEYANCKKSQGNVDNKEYAVN 1031
VKVKIPEELKPWLVEDWDLVTRQKQLFQLPAKKNVDAILEEYANCKKSQGNVDNKEYAVN
Sbjct: 121 VKVKIPEELKPWLVEDWDLVTRQKQLFQLPAKKNVDAILEEYANCKKSQGNVDNKEYAVN 180
Query: 1032 EVVAGIKEYFNVMLGTQLLYKFERPQYAEILLAHPDAPMSQVYGAPHLLRLFVRIGAMLA 1211
EVVAGIKEYFNVMLGTQLLYKFERPQYAEILLAHPDAPMSQVYGAPHLLRLFVRIGAMLA
Sbjct: 181 EVVAGIKEYFNVMLGTQLLYKFERPQYAEILLAHPDAPMSQVYGAPHLLRLFVRIGAMLA 240
Query: 1212 YTPLDEKSLALLLGYLHDFLKYLAKNAASLFTASDYKVASAEYHRKAL 1355
YTPLDEKSLALLLGYLHDFLKYLAKN+ASLFTASDYKVASAEYHRKAL
Sbjct: 241 YTPLDEKSLALLLGYLHDFLKYLAKNSASLFTASDYKVASAEYHRKAL 288
>ref|NP_001135901.1| mortality factor 4-like protein 2 [Homo sapiens].
Length = 288
Score = 568 bits (1464), Expect = e-162
Identities = 283/288 (98%), Positives = 285/288 (98%)
Frame = +3
Query: 492 MSSRKQGSQTRGQQSAEEDNFKKPTRSNMQRSKMRGASSGKKTAGPQQKNLEAALPGRWG 671
MSSRKQGSQ RGQQSAEE+NFKKPTRSNMQRSKMRGASSGKKTAGPQQKNLE ALPGRWG
Sbjct: 1 MSSRKQGSQPRGQQSAEEENFKKPTRSNMQRSKMRGASSGKKTAGPQQKNLEPALPGRWG 60
Query: 672 GRSAETPPSGSVRKTRKNKQKTPGNGDGGSTSEAPQPPRKKRARADPTVESEEAFKNRME 851
GRSAE PPSGSVRKTRKNKQKTPGNGDGGSTSEAPQPPRKKRARADPTVESEEAFKNRME
Sbjct: 61 GRSAENPPSGSVRKTRKNKQKTPGNGDGGSTSEAPQPPRKKRARADPTVESEEAFKNRME 120
Query: 852 VKVKIPEELKPWLVEDWDLVTRQKQLFQLPAKKNVDAILEEYANCKKSQGNVDNKEYAVN 1031
VKVKIPEELKPWLVEDWDLVTRQKQLFQLPAKKNVDAILEEYANCKKSQGNVDNKEYAVN
Sbjct: 121 VKVKIPEELKPWLVEDWDLVTRQKQLFQLPAKKNVDAILEEYANCKKSQGNVDNKEYAVN 180
Query: 1032 EVVAGIKEYFNVMLGTQLLYKFERPQYAEILLAHPDAPMSQVYGAPHLLRLFVRIGAMLA 1211
EVVAGIKEYFNVMLGTQLLYKFERPQYAEILLAHPDAPMSQVYGAPHLLRLFVRIGAMLA
Sbjct: 181 EVVAGIKEYFNVMLGTQLLYKFERPQYAEILLAHPDAPMSQVYGAPHLLRLFVRIGAMLA 240
Query: 1212 YTPLDEKSLALLLGYLHDFLKYLAKNAASLFTASDYKVASAEYHRKAL 1355
YTPLDEKSLALLLGYLHDFLKYLAKN+ASLFTASDYKVASAEYHRKAL
Sbjct: 241 YTPLDEKSLALLLGYLHDFLKYLAKNSASLFTASDYKVASAEYHRKAL 288
>ref|NP_001135900.1| mortality factor 4-like protein 2 [Homo sapiens].
Length = 288
Score = 568 bits (1464), Expect = e-162
Identities = 283/288 (98%), Positives = 285/288 (98%)
Frame = +3
Query: 492 MSSRKQGSQTRGQQSAEEDNFKKPTRSNMQRSKMRGASSGKKTAGPQQKNLEAALPGRWG 671
MSSRKQGSQ RGQQSAEE+NFKKPTRSNMQRSKMRGASSGKKTAGPQQKNLE ALPGRWG
Sbjct: 1 MSSRKQGSQPRGQQSAEEENFKKPTRSNMQRSKMRGASSGKKTAGPQQKNLEPALPGRWG 60
Query: 672 GRSAETPPSGSVRKTRKNKQKTPGNGDGGSTSEAPQPPRKKRARADPTVESEEAFKNRME 851
GRSAE PPSGSVRKTRKNKQKTPGNGDGGSTSEAPQPPRKKRARADPTVESEEAFKNRME
Sbjct: 61 GRSAENPPSGSVRKTRKNKQKTPGNGDGGSTSEAPQPPRKKRARADPTVESEEAFKNRME 120
Query: 852 VKVKIPEELKPWLVEDWDLVTRQKQLFQLPAKKNVDAILEEYANCKKSQGNVDNKEYAVN 1031
VKVKIPEELKPWLVEDWDLVTRQKQLFQLPAKKNVDAILEEYANCKKSQGNVDNKEYAVN
Sbjct: 121 VKVKIPEELKPWLVEDWDLVTRQKQLFQLPAKKNVDAILEEYANCKKSQGNVDNKEYAVN 180
Query: 1032 EVVAGIKEYFNVMLGTQLLYKFERPQYAEILLAHPDAPMSQVYGAPHLLRLFVRIGAMLA 1211
EVVAGIKEYFNVMLGTQLLYKFERPQYAEILLAHPDAPMSQVYGAPHLLRLFVRIGAMLA
Sbjct: 181 EVVAGIKEYFNVMLGTQLLYKFERPQYAEILLAHPDAPMSQVYGAPHLLRLFVRIGAMLA 240
Query: 1212 YTPLDEKSLALLLGYLHDFLKYLAKNAASLFTASDYKVASAEYHRKAL 1355
YTPLDEKSLALLLGYLHDFLKYLAKN+ASLFTASDYKVASAEYHRKAL
Sbjct: 241 YTPLDEKSLALLLGYLHDFLKYLAKNSASLFTASDYKVASAEYHRKAL 288
>ref|NP_001135899.1| mortality factor 4-like protein 2 [Homo sapiens].
Length = 288
Score = 568 bits (1464), Expect = e-162
Identities = 283/288 (98%), Positives = 285/288 (98%)
Frame = +3
Query: 492 MSSRKQGSQTRGQQSAEEDNFKKPTRSNMQRSKMRGASSGKKTAGPQQKNLEAALPGRWG 671
MSSRKQGSQ RGQQSAEE+NFKKPTRSNMQRSKMRGASSGKKTAGPQQKNLE ALPGRWG
Sbjct: 1 MSSRKQGSQPRGQQSAEEENFKKPTRSNMQRSKMRGASSGKKTAGPQQKNLEPALPGRWG 60
Query: 672 GRSAETPPSGSVRKTRKNKQKTPGNGDGGSTSEAPQPPRKKRARADPTVESEEAFKNRME 851
GRSAE PPSGSVRKTRKNKQKTPGNGDGGSTSEAPQPPRKKRARADPTVESEEAFKNRME
Sbjct: 61 GRSAENPPSGSVRKTRKNKQKTPGNGDGGSTSEAPQPPRKKRARADPTVESEEAFKNRME 120
Query: 852 VKVKIPEELKPWLVEDWDLVTRQKQLFQLPAKKNVDAILEEYANCKKSQGNVDNKEYAVN 1031
VKVKIPEELKPWLVEDWDLVTRQKQLFQLPAKKNVDAILEEYANCKKSQGNVDNKEYAVN
Sbjct: 121 VKVKIPEELKPWLVEDWDLVTRQKQLFQLPAKKNVDAILEEYANCKKSQGNVDNKEYAVN 180
Query: 1032 EVVAGIKEYFNVMLGTQLLYKFERPQYAEILLAHPDAPMSQVYGAPHLLRLFVRIGAMLA 1211
EVVAGIKEYFNVMLGTQLLYKFERPQYAEILLAHPDAPMSQVYGAPHLLRLFVRIGAMLA
Sbjct: 181 EVVAGIKEYFNVMLGTQLLYKFERPQYAEILLAHPDAPMSQVYGAPHLLRLFVRIGAMLA 240
Query: 1212 YTPLDEKSLALLLGYLHDFLKYLAKNAASLFTASDYKVASAEYHRKAL 1355
YTPLDEKSLALLLGYLHDFLKYLAKN+ASLFTASDYKVASAEYHRKAL
Sbjct: 241 YTPLDEKSLALLLGYLHDFLKYLAKNSASLFTASDYKVASAEYHRKAL 288
>ref|NP_001135896.1| mortality factor 4-like protein 2 [Homo sapiens].
Length = 288
Score = 568 bits (1464), Expect = e-162
Identities = 283/288 (98%), Positives = 285/288 (98%)
Frame = +3
Query: 492 MSSRKQGSQTRGQQSAEEDNFKKPTRSNMQRSKMRGASSGKKTAGPQQKNLEAALPGRWG 671
MSSRKQGSQ RGQQSAEE+NFKKPTRSNMQRSKMRGASSGKKTAGPQQKNLE ALPGRWG
Sbjct: 1 MSSRKQGSQPRGQQSAEEENFKKPTRSNMQRSKMRGASSGKKTAGPQQKNLEPALPGRWG 60
Query: 672 GRSAETPPSGSVRKTRKNKQKTPGNGDGGSTSEAPQPPRKKRARADPTVESEEAFKNRME 851
GRSAE PPSGSVRKTRKNKQKTPGNGDGGSTSEAPQPPRKKRARADPTVESEEAFKNRME
Sbjct: 61 GRSAENPPSGSVRKTRKNKQKTPGNGDGGSTSEAPQPPRKKRARADPTVESEEAFKNRME 120
Query: 852 VKVKIPEELKPWLVEDWDLVTRQKQLFQLPAKKNVDAILEEYANCKKSQGNVDNKEYAVN 1031
VKVKIPEELKPWLVEDWDLVTRQKQLFQLPAKKNVDAILEEYANCKKSQGNVDNKEYAVN
Sbjct: 121 VKVKIPEELKPWLVEDWDLVTRQKQLFQLPAKKNVDAILEEYANCKKSQGNVDNKEYAVN 180
Query: 1032 EVVAGIKEYFNVMLGTQLLYKFERPQYAEILLAHPDAPMSQVYGAPHLLRLFVRIGAMLA 1211
EVVAGIKEYFNVMLGTQLLYKFERPQYAEILLAHPDAPMSQVYGAPHLLRLFVRIGAMLA
Sbjct: 181 EVVAGIKEYFNVMLGTQLLYKFERPQYAEILLAHPDAPMSQVYGAPHLLRLFVRIGAMLA 240
Query: 1212 YTPLDEKSLALLLGYLHDFLKYLAKNAASLFTASDYKVASAEYHRKAL 1355
YTPLDEKSLALLLGYLHDFLKYLAKN+ASLFTASDYKVASAEYHRKAL
Sbjct: 241 YTPLDEKSLALLLGYLHDFLKYLAKNSASLFTASDYKVASAEYHRKAL 288
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 55,117,245
Number of extensions: 1469339
Number of successful extensions: 5357
Number of sequences better than 1.0e-05: 21
Number of HSP's gapped: 5298
Number of HSP's successfully gapped: 23
Length of query: 469
Length of database: 18,297,164
Length adjustment: 106
Effective length of query: 363
Effective length of database: 14,802,980
Effective search space: 5373481740
Effective search space used: 5373481740
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-000686
(1408 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001161702.1| mortality factor 4-like protein 2 [Mus muscu... 552 e-157
Alignment gi|NP_001161701.1| mortality factor 4-like protein 2 [Mus muscu... 552 e-157
Alignment gi|NP_001161700.1| mortality factor 4-like protein 2 [Mus muscu... 552 e-157
Alignment gi|NP_001161699.1| mortality factor 4-like protein 2 [Mus muscu... 552 e-157
Alignment gi|NP_001161698.1| mortality factor 4-like protein 2 [Mus muscu... 552 e-157
Alignment gi|NP_001161697.1| mortality factor 4-like protein 2 [Mus muscu... 552 e-157
Alignment gi|NP_062742.4| mortality factor 4-like protein 2 [Mus musculus]. 552 e-157
Alignment gi|XP_899406.1| PREDICTED: predicted gene 6747 isoform 2 [Mus m... 411 e-120
Alignment gi|XP_003086071.1| PREDICTED: predicted gene 6747 isoform 1 [Mu... 411 e-120
Alignment gi|NP_077751.1| mortality factor 4-like protein 1 isoform b [Mu... 411 e-120
>ref|NP_001161702.1| mortality factor 4-like protein 2 [Mus musculus].
Length = 288
Score = 552 bits (1422), Expect = e-157
Identities = 273/288 (94%), Positives = 280/288 (97%)
Frame = +3
Query: 492 MSSRKQGSQTRGQQSAEEDNFKKPTRSNMQRSKMRGASSGKKTAGPQQKNLEAALPGRWG 671
MSSRKQ SQTRGQQSAEEDNFKKPTRSNMQRSKMRGA+SGKK+AG Q KNL+ ALPGRWG
Sbjct: 1 MSSRKQASQTRGQQSAEEDNFKKPTRSNMQRSKMRGAASGKKSAGSQPKNLDPALPGRWG 60
Query: 672 GRSAETPPSGSVRKTRKNKQKTPGNGDGGSTSEAPQPPRKKRARADPTVESEEAFKNRME 851
GRSAE PPSGSVRKTRKNKQK PGNGDGGSTSE PQPPRKKRARADPTVESEEAFK+RME
Sbjct: 61 GRSAENPPSGSVRKTRKNKQKAPGNGDGGSTSEVPQPPRKKRARADPTVESEEAFKSRME 120
Query: 852 VKVKIPEELKPWLVEDWDLVTRQKQLFQLPAKKNVDAILEEYANCKKSQGNVDNKEYAVN 1031
VKVKIPEELKPWLVEDWDLVTRQKQLFQLPAKKNVDAILEEYANCKKSQGNVDNKEYAVN
Sbjct: 121 VKVKIPEELKPWLVEDWDLVTRQKQLFQLPAKKNVDAILEEYANCKKSQGNVDNKEYAVN 180
Query: 1032 EVVAGIKEYFNVMLGTQLLYKFERPQYAEILLAHPDAPMSQVYGAPHLLRLFVRIGAMLA 1211
EVV GIKEYFNVMLGTQLLYKFERPQYAEILLAHPDAPMSQ+YGAPHLLRLFVRIGAMLA
Sbjct: 181 EVVGGIKEYFNVMLGTQLLYKFERPQYAEILLAHPDAPMSQIYGAPHLLRLFVRIGAMLA 240
Query: 1212 YTPLDEKSLALLLGYLHDFLKYLAKNAASLFTASDYKVASAEYHRKAL 1355
YTPLDEKSLALLLGYLHDFLKYLAKN+ASLFTASDYKVASA+YHRKAL
Sbjct: 241 YTPLDEKSLALLLGYLHDFLKYLAKNSASLFTASDYKVASADYHRKAL 288
>ref|NP_001161701.1| mortality factor 4-like protein 2 [Mus musculus].
Length = 288
Score = 552 bits (1422), Expect = e-157
Identities = 273/288 (94%), Positives = 280/288 (97%)
Frame = +3
Query: 492 MSSRKQGSQTRGQQSAEEDNFKKPTRSNMQRSKMRGASSGKKTAGPQQKNLEAALPGRWG 671
MSSRKQ SQTRGQQSAEEDNFKKPTRSNMQRSKMRGA+SGKK+AG Q KNL+ ALPGRWG
Sbjct: 1 MSSRKQASQTRGQQSAEEDNFKKPTRSNMQRSKMRGAASGKKSAGSQPKNLDPALPGRWG 60
Query: 672 GRSAETPPSGSVRKTRKNKQKTPGNGDGGSTSEAPQPPRKKRARADPTVESEEAFKNRME 851
GRSAE PPSGSVRKTRKNKQK PGNGDGGSTSE PQPPRKKRARADPTVESEEAFK+RME
Sbjct: 61 GRSAENPPSGSVRKTRKNKQKAPGNGDGGSTSEVPQPPRKKRARADPTVESEEAFKSRME 120
Query: 852 VKVKIPEELKPWLVEDWDLVTRQKQLFQLPAKKNVDAILEEYANCKKSQGNVDNKEYAVN 1031
VKVKIPEELKPWLVEDWDLVTRQKQLFQLPAKKNVDAILEEYANCKKSQGNVDNKEYAVN
Sbjct: 121 VKVKIPEELKPWLVEDWDLVTRQKQLFQLPAKKNVDAILEEYANCKKSQGNVDNKEYAVN 180
Query: 1032 EVVAGIKEYFNVMLGTQLLYKFERPQYAEILLAHPDAPMSQVYGAPHLLRLFVRIGAMLA 1211
EVV GIKEYFNVMLGTQLLYKFERPQYAEILLAHPDAPMSQ+YGAPHLLRLFVRIGAMLA
Sbjct: 181 EVVGGIKEYFNVMLGTQLLYKFERPQYAEILLAHPDAPMSQIYGAPHLLRLFVRIGAMLA 240
Query: 1212 YTPLDEKSLALLLGYLHDFLKYLAKNAASLFTASDYKVASAEYHRKAL 1355
YTPLDEKSLALLLGYLHDFLKYLAKN+ASLFTASDYKVASA+YHRKAL
Sbjct: 241 YTPLDEKSLALLLGYLHDFLKYLAKNSASLFTASDYKVASADYHRKAL 288
>ref|NP_001161700.1| mortality factor 4-like protein 2 [Mus musculus].
Length = 288
Score = 552 bits (1422), Expect = e-157
Identities = 273/288 (94%), Positives = 280/288 (97%)
Frame = +3
Query: 492 MSSRKQGSQTRGQQSAEEDNFKKPTRSNMQRSKMRGASSGKKTAGPQQKNLEAALPGRWG 671
MSSRKQ SQTRGQQSAEEDNFKKPTRSNMQRSKMRGA+SGKK+AG Q KNL+ ALPGRWG
Sbjct: 1 MSSRKQASQTRGQQSAEEDNFKKPTRSNMQRSKMRGAASGKKSAGSQPKNLDPALPGRWG 60
Query: 672 GRSAETPPSGSVRKTRKNKQKTPGNGDGGSTSEAPQPPRKKRARADPTVESEEAFKNRME 851
GRSAE PPSGSVRKTRKNKQK PGNGDGGSTSE PQPPRKKRARADPTVESEEAFK+RME
Sbjct: 61 GRSAENPPSGSVRKTRKNKQKAPGNGDGGSTSEVPQPPRKKRARADPTVESEEAFKSRME 120
Query: 852 VKVKIPEELKPWLVEDWDLVTRQKQLFQLPAKKNVDAILEEYANCKKSQGNVDNKEYAVN 1031
VKVKIPEELKPWLVEDWDLVTRQKQLFQLPAKKNVDAILEEYANCKKSQGNVDNKEYAVN
Sbjct: 121 VKVKIPEELKPWLVEDWDLVTRQKQLFQLPAKKNVDAILEEYANCKKSQGNVDNKEYAVN 180
Query: 1032 EVVAGIKEYFNVMLGTQLLYKFERPQYAEILLAHPDAPMSQVYGAPHLLRLFVRIGAMLA 1211
EVV GIKEYFNVMLGTQLLYKFERPQYAEILLAHPDAPMSQ+YGAPHLLRLFVRIGAMLA
Sbjct: 181 EVVGGIKEYFNVMLGTQLLYKFERPQYAEILLAHPDAPMSQIYGAPHLLRLFVRIGAMLA 240
Query: 1212 YTPLDEKSLALLLGYLHDFLKYLAKNAASLFTASDYKVASAEYHRKAL 1355
YTPLDEKSLALLLGYLHDFLKYLAKN+ASLFTASDYKVASA+YHRKAL
Sbjct: 241 YTPLDEKSLALLLGYLHDFLKYLAKNSASLFTASDYKVASADYHRKAL 288
>ref|NP_001161699.1| mortality factor 4-like protein 2 [Mus musculus].
Length = 288
Score = 552 bits (1422), Expect = e-157
Identities = 273/288 (94%), Positives = 280/288 (97%)
Frame = +3
Query: 492 MSSRKQGSQTRGQQSAEEDNFKKPTRSNMQRSKMRGASSGKKTAGPQQKNLEAALPGRWG 671
MSSRKQ SQTRGQQSAEEDNFKKPTRSNMQRSKMRGA+SGKK+AG Q KNL+ ALPGRWG
Sbjct: 1 MSSRKQASQTRGQQSAEEDNFKKPTRSNMQRSKMRGAASGKKSAGSQPKNLDPALPGRWG 60
Query: 672 GRSAETPPSGSVRKTRKNKQKTPGNGDGGSTSEAPQPPRKKRARADPTVESEEAFKNRME 851
GRSAE PPSGSVRKTRKNKQK PGNGDGGSTSE PQPPRKKRARADPTVESEEAFK+RME
Sbjct: 61 GRSAENPPSGSVRKTRKNKQKAPGNGDGGSTSEVPQPPRKKRARADPTVESEEAFKSRME 120
Query: 852 VKVKIPEELKPWLVEDWDLVTRQKQLFQLPAKKNVDAILEEYANCKKSQGNVDNKEYAVN 1031
VKVKIPEELKPWLVEDWDLVTRQKQLFQLPAKKNVDAILEEYANCKKSQGNVDNKEYAVN
Sbjct: 121 VKVKIPEELKPWLVEDWDLVTRQKQLFQLPAKKNVDAILEEYANCKKSQGNVDNKEYAVN 180
Query: 1032 EVVAGIKEYFNVMLGTQLLYKFERPQYAEILLAHPDAPMSQVYGAPHLLRLFVRIGAMLA 1211
EVV GIKEYFNVMLGTQLLYKFERPQYAEILLAHPDAPMSQ+YGAPHLLRLFVRIGAMLA
Sbjct: 181 EVVGGIKEYFNVMLGTQLLYKFERPQYAEILLAHPDAPMSQIYGAPHLLRLFVRIGAMLA 240
Query: 1212 YTPLDEKSLALLLGYLHDFLKYLAKNAASLFTASDYKVASAEYHRKAL 1355
YTPLDEKSLALLLGYLHDFLKYLAKN+ASLFTASDYKVASA+YHRKAL
Sbjct: 241 YTPLDEKSLALLLGYLHDFLKYLAKNSASLFTASDYKVASADYHRKAL 288
>ref|NP_001161698.1| mortality factor 4-like protein 2 [Mus musculus].
Length = 288
Score = 552 bits (1422), Expect = e-157
Identities = 273/288 (94%), Positives = 280/288 (97%)
Frame = +3
Query: 492 MSSRKQGSQTRGQQSAEEDNFKKPTRSNMQRSKMRGASSGKKTAGPQQKNLEAALPGRWG 671
MSSRKQ SQTRGQQSAEEDNFKKPTRSNMQRSKMRGA+SGKK+AG Q KNL+ ALPGRWG
Sbjct: 1 MSSRKQASQTRGQQSAEEDNFKKPTRSNMQRSKMRGAASGKKSAGSQPKNLDPALPGRWG 60
Query: 672 GRSAETPPSGSVRKTRKNKQKTPGNGDGGSTSEAPQPPRKKRARADPTVESEEAFKNRME 851
GRSAE PPSGSVRKTRKNKQK PGNGDGGSTSE PQPPRKKRARADPTVESEEAFK+RME
Sbjct: 61 GRSAENPPSGSVRKTRKNKQKAPGNGDGGSTSEVPQPPRKKRARADPTVESEEAFKSRME 120
Query: 852 VKVKIPEELKPWLVEDWDLVTRQKQLFQLPAKKNVDAILEEYANCKKSQGNVDNKEYAVN 1031
VKVKIPEELKPWLVEDWDLVTRQKQLFQLPAKKNVDAILEEYANCKKSQGNVDNKEYAVN
Sbjct: 121 VKVKIPEELKPWLVEDWDLVTRQKQLFQLPAKKNVDAILEEYANCKKSQGNVDNKEYAVN 180
Query: 1032 EVVAGIKEYFNVMLGTQLLYKFERPQYAEILLAHPDAPMSQVYGAPHLLRLFVRIGAMLA 1211
EVV GIKEYFNVMLGTQLLYKFERPQYAEILLAHPDAPMSQ+YGAPHLLRLFVRIGAMLA
Sbjct: 181 EVVGGIKEYFNVMLGTQLLYKFERPQYAEILLAHPDAPMSQIYGAPHLLRLFVRIGAMLA 240
Query: 1212 YTPLDEKSLALLLGYLHDFLKYLAKNAASLFTASDYKVASAEYHRKAL 1355
YTPLDEKSLALLLGYLHDFLKYLAKN+ASLFTASDYKVASA+YHRKAL
Sbjct: 241 YTPLDEKSLALLLGYLHDFLKYLAKNSASLFTASDYKVASADYHRKAL 288
>ref|NP_001161697.1| mortality factor 4-like protein 2 [Mus musculus].
Length = 288
Score = 552 bits (1422), Expect = e-157
Identities = 273/288 (94%), Positives = 280/288 (97%)
Frame = +3
Query: 492 MSSRKQGSQTRGQQSAEEDNFKKPTRSNMQRSKMRGASSGKKTAGPQQKNLEAALPGRWG 671
MSSRKQ SQTRGQQSAEEDNFKKPTRSNMQRSKMRGA+SGKK+AG Q KNL+ ALPGRWG
Sbjct: 1 MSSRKQASQTRGQQSAEEDNFKKPTRSNMQRSKMRGAASGKKSAGSQPKNLDPALPGRWG 60
Query: 672 GRSAETPPSGSVRKTRKNKQKTPGNGDGGSTSEAPQPPRKKRARADPTVESEEAFKNRME 851
GRSAE PPSGSVRKTRKNKQK PGNGDGGSTSE PQPPRKKRARADPTVESEEAFK+RME
Sbjct: 61 GRSAENPPSGSVRKTRKNKQKAPGNGDGGSTSEVPQPPRKKRARADPTVESEEAFKSRME 120
Query: 852 VKVKIPEELKPWLVEDWDLVTRQKQLFQLPAKKNVDAILEEYANCKKSQGNVDNKEYAVN 1031
VKVKIPEELKPWLVEDWDLVTRQKQLFQLPAKKNVDAILEEYANCKKSQGNVDNKEYAVN
Sbjct: 121 VKVKIPEELKPWLVEDWDLVTRQKQLFQLPAKKNVDAILEEYANCKKSQGNVDNKEYAVN 180
Query: 1032 EVVAGIKEYFNVMLGTQLLYKFERPQYAEILLAHPDAPMSQVYGAPHLLRLFVRIGAMLA 1211
EVV GIKEYFNVMLGTQLLYKFERPQYAEILLAHPDAPMSQ+YGAPHLLRLFVRIGAMLA
Sbjct: 181 EVVGGIKEYFNVMLGTQLLYKFERPQYAEILLAHPDAPMSQIYGAPHLLRLFVRIGAMLA 240
Query: 1212 YTPLDEKSLALLLGYLHDFLKYLAKNAASLFTASDYKVASAEYHRKAL 1355
YTPLDEKSLALLLGYLHDFLKYLAKN+ASLFTASDYKVASA+YHRKAL
Sbjct: 241 YTPLDEKSLALLLGYLHDFLKYLAKNSASLFTASDYKVASADYHRKAL 288
>ref|NP_062742.4| mortality factor 4-like protein 2 [Mus musculus].
Length = 288
Score = 552 bits (1422), Expect = e-157
Identities = 273/288 (94%), Positives = 280/288 (97%)
Frame = +3
Query: 492 MSSRKQGSQTRGQQSAEEDNFKKPTRSNMQRSKMRGASSGKKTAGPQQKNLEAALPGRWG 671
MSSRKQ SQTRGQQSAEEDNFKKPTRSNMQRSKMRGA+SGKK+AG Q KNL+ ALPGRWG
Sbjct: 1 MSSRKQASQTRGQQSAEEDNFKKPTRSNMQRSKMRGAASGKKSAGSQPKNLDPALPGRWG 60
Query: 672 GRSAETPPSGSVRKTRKNKQKTPGNGDGGSTSEAPQPPRKKRARADPTVESEEAFKNRME 851
GRSAE PPSGSVRKTRKNKQK PGNGDGGSTSE PQPPRKKRARADPTVESEEAFK+RME
Sbjct: 61 GRSAENPPSGSVRKTRKNKQKAPGNGDGGSTSEVPQPPRKKRARADPTVESEEAFKSRME 120
Query: 852 VKVKIPEELKPWLVEDWDLVTRQKQLFQLPAKKNVDAILEEYANCKKSQGNVDNKEYAVN 1031
VKVKIPEELKPWLVEDWDLVTRQKQLFQLPAKKNVDAILEEYANCKKSQGNVDNKEYAVN
Sbjct: 121 VKVKIPEELKPWLVEDWDLVTRQKQLFQLPAKKNVDAILEEYANCKKSQGNVDNKEYAVN 180
Query: 1032 EVVAGIKEYFNVMLGTQLLYKFERPQYAEILLAHPDAPMSQVYGAPHLLRLFVRIGAMLA 1211
EVV GIKEYFNVMLGTQLLYKFERPQYAEILLAHPDAPMSQ+YGAPHLLRLFVRIGAMLA
Sbjct: 181 EVVGGIKEYFNVMLGTQLLYKFERPQYAEILLAHPDAPMSQIYGAPHLLRLFVRIGAMLA 240
Query: 1212 YTPLDEKSLALLLGYLHDFLKYLAKNAASLFTASDYKVASAEYHRKAL 1355
YTPLDEKSLALLLGYLHDFLKYLAKN+ASLFTASDYKVASA+YHRKAL
Sbjct: 241 YTPLDEKSLALLLGYLHDFLKYLAKNSASLFTASDYKVASADYHRKAL 288
>ref|XP_899406.1| PREDICTED: predicted gene 6747 isoform 2 [Mus musculus].
Length = 323
Score = 411 bits (1056), Expect(2) = e-120
Identities = 206/272 (75%), Positives = 226/272 (83%)
Frame = +3
Query: 540 EEDNFKKPTRSNMQRSKMRGASSGKKTAGPQQKNLEAALPGRWGGRSAETPPSGSVRKTR 719
++ +K + KMRGA+ GKKT+G QQKN+E KT+
Sbjct: 72 KQRELQKANQEQYAEGKMRGAAPGKKTSGLQQKNVEV--------------------KTK 111
Query: 720 KNKQKTPGNGDGGSTSEAPQPPRKKRARADPTVESEEAFKNRMEVKVKIPEELKPWLVED 899
KNKQKTPGNGDGGSTSE PQPPRKKRAR DPTVE+EE F NR+EVKVKIPEELKPWLV+D
Sbjct: 112 KNKQKTPGNGDGGSTSETPQPPRKKRARVDPTVENEETFMNRVEVKVKIPEELKPWLVDD 171
Query: 900 WDLVTRQKQLFQLPAKKNVDAILEEYANCKKSQGNVDNKEYAVNEVVAGIKEYFNVMLGT 1079
WDL+TRQKQLF LPAKKNVD+ILE+YAN KKS+GN DNKEYAVNEVVAGIKEYFNVMLGT
Sbjct: 172 WDLITRQKQLFYLPAKKNVDSILEDYANYKKSRGNTDNKEYAVNEVVAGIKEYFNVMLGT 231
Query: 1080 QLLYKFERPQYAEILLAHPDAPMSQVYGAPHLLRLFVRIGAMLAYTPLDEKSLALLLGYL 1259
QLLYKFERPQYAEIL HPDAPMSQVYGAPHLLRLFVRIGAMLAYTPLDEKSLALLL YL
Sbjct: 232 QLLYKFERPQYAEILTDHPDAPMSQVYGAPHLLRLFVRIGAMLAYTPLDEKSLALLLNYL 291
Query: 1260 HDFLKYLAKNAASLFTASDYKVASAEYHRKAL 1355
HDFLKYLAKN+A+LF+ASDY+VA EYHRKA+
Sbjct: 292 HDFLKYLAKNSATLFSASDYEVAPPEYHRKAV 323
Score = 42.4 bits (98), Expect(2) = e-120
Identities = 20/27 (74%), Positives = 22/27 (81%)
Frame = +1
Query: 466 TGWNKNRVE*VPESRVLKLVDNNLQKK 546
+GWNKN E VPESRVLK VD NLQK+
Sbjct: 47 SGWNKNWDEWVPESRVLKYVDTNLQKQ 73
>ref|XP_003086071.1| PREDICTED: predicted gene 6747 isoform 1 [Mus musculus].
Length = 323
Score = 411 bits (1056), Expect(2) = e-120
Identities = 206/272 (75%), Positives = 226/272 (83%)
Frame = +3
Query: 540 EEDNFKKPTRSNMQRSKMRGASSGKKTAGPQQKNLEAALPGRWGGRSAETPPSGSVRKTR 719
++ +K + KMRGA+ GKKT+G QQKN+E KT+
Sbjct: 72 KQRELQKANQEQYAEGKMRGAAPGKKTSGLQQKNVEV--------------------KTK 111
Query: 720 KNKQKTPGNGDGGSTSEAPQPPRKKRARADPTVESEEAFKNRMEVKVKIPEELKPWLVED 899
KNKQKTPGNGDGGSTSE PQPPRKKRAR DPTVE+EE F NR+EVKVKIPEELKPWLV+D
Sbjct: 112 KNKQKTPGNGDGGSTSETPQPPRKKRARVDPTVENEETFMNRVEVKVKIPEELKPWLVDD 171
Query: 900 WDLVTRQKQLFQLPAKKNVDAILEEYANCKKSQGNVDNKEYAVNEVVAGIKEYFNVMLGT 1079
WDL+TRQKQLF LPAKKNVD+ILE+YAN KKS+GN DNKEYAVNEVVAGIKEYFNVMLGT
Sbjct: 172 WDLITRQKQLFYLPAKKNVDSILEDYANYKKSRGNTDNKEYAVNEVVAGIKEYFNVMLGT 231
Query: 1080 QLLYKFERPQYAEILLAHPDAPMSQVYGAPHLLRLFVRIGAMLAYTPLDEKSLALLLGYL 1259
QLLYKFERPQYAEIL HPDAPMSQVYGAPHLLRLFVRIGAMLAYTPLDEKSLALLL YL
Sbjct: 232 QLLYKFERPQYAEILADHPDAPMSQVYGAPHLLRLFVRIGAMLAYTPLDEKSLALLLNYL 291
Query: 1260 HDFLKYLAKNAASLFTASDYKVASAEYHRKAL 1355
HDFLKYLAKN+A+LF+ASDY+VA EYHRKA+
Sbjct: 292 HDFLKYLAKNSATLFSASDYEVAPPEYHRKAV 323
Score = 42.4 bits (98), Expect(2) = e-120
Identities = 20/27 (74%), Positives = 22/27 (81%)
Frame = +1
Query: 466 TGWNKNRVE*VPESRVLKLVDNNLQKK 546
+GWNKN E VPESRVLK VD NLQK+
Sbjct: 47 SGWNKNWDEWVPESRVLKYVDTNLQKQ 73
>ref|NP_077751.1| mortality factor 4-like protein 1 isoform b [Mus musculus].
Length = 323
Score = 411 bits (1056), Expect(2) = e-120
Identities = 206/272 (75%), Positives = 226/272 (83%)
Frame = +3
Query: 540 EEDNFKKPTRSNMQRSKMRGASSGKKTAGPQQKNLEAALPGRWGGRSAETPPSGSVRKTR 719
++ +K + KMRGA+ GKKT+G QQKN+E KT+
Sbjct: 72 KQRELQKANQEQYAEGKMRGAAPGKKTSGLQQKNVEV--------------------KTK 111
Query: 720 KNKQKTPGNGDGGSTSEAPQPPRKKRARADPTVESEEAFKNRMEVKVKIPEELKPWLVED 899
KNKQKTPGNGDGGSTSE PQPPRKKRAR DPTVE+EE F NR+EVKVKIPEELKPWLV+D
Sbjct: 112 KNKQKTPGNGDGGSTSETPQPPRKKRARVDPTVENEETFMNRVEVKVKIPEELKPWLVDD 171
Query: 900 WDLVTRQKQLFQLPAKKNVDAILEEYANCKKSQGNVDNKEYAVNEVVAGIKEYFNVMLGT 1079
WDL+TRQKQLF LPAKKNVD+ILE+YAN KKS+GN DNKEYAVNEVVAGIKEYFNVMLGT
Sbjct: 172 WDLITRQKQLFYLPAKKNVDSILEDYANYKKSRGNTDNKEYAVNEVVAGIKEYFNVMLGT 231
Query: 1080 QLLYKFERPQYAEILLAHPDAPMSQVYGAPHLLRLFVRIGAMLAYTPLDEKSLALLLGYL 1259
QLLYKFERPQYAEIL HPDAPMSQVYGAPHLLRLFVRIGAMLAYTPLDEKSLALLL YL
Sbjct: 232 QLLYKFERPQYAEILADHPDAPMSQVYGAPHLLRLFVRIGAMLAYTPLDEKSLALLLNYL 291
Query: 1260 HDFLKYLAKNAASLFTASDYKVASAEYHRKAL 1355
HDFLKYLAKN+A+LF+ASDY+VA EYHRKA+
Sbjct: 292 HDFLKYLAKNSATLFSASDYEVAPPEYHRKAV 323
Score = 42.4 bits (98), Expect(2) = e-120
Identities = 20/27 (74%), Positives = 22/27 (81%)
Frame = +1
Query: 466 TGWNKNRVE*VPESRVLKLVDNNLQKK 546
+GWNKN E VPESRVLK VD NLQK+
Sbjct: 47 SGWNKNWDEWVPESRVLKYVDTNLQKQ 73
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 46,704,855
Number of extensions: 1231774
Number of successful extensions: 4280
Number of sequences better than 1.0e-05: 19
Number of HSP's gapped: 4238
Number of HSP's successfully gapped: 22
Length of query: 469
Length of database: 15,617,559
Length adjustment: 105
Effective length of query: 364
Effective length of database: 12,463,779
Effective search space: 4536815556
Effective search space used: 4536815556
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-000686
(1408 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_003360452.1| PREDICTED: mortality factor 4-like protein 2... 577 e-165
Alignment gi|XP_003135318.1| PREDICTED: mortality factor 4-like protein 2... 577 e-165
Alignment gi|XP_003360451.1| PREDICTED: mortality factor 4-like protein 2... 577 e-165
Alignment gi|XP_003135317.1| PREDICTED: mortality factor 4-like protein 2... 577 e-165
Alignment gi|XP_003360450.1| PREDICTED: mortality factor 4-like protein 2... 577 e-165
Alignment gi|XP_003135315.1| PREDICTED: mortality factor 4-like protein 2... 577 e-165
Alignment gi|XP_003356693.1| PREDICTED: mortality factor 4-like protein 1... 409 e-120
Alignment gi|XP_001927776.1| PREDICTED: mortality factor 4-like protein 1... 409 e-120
Alignment gi|XP_001927789.1| PREDICTED: mortality factor 4-like protein 1... 410 e-114
Alignment gi|XP_003134973.1| PREDICTED: male-specific lethal 3 homolog [S... 50 2e-06
>ref|XP_003360452.1| PREDICTED: mortality factor 4-like protein 2-like [Sus scrofa].
Length = 288
Score = 577 bits (1487), Expect = e-165
Identities = 288/288 (100%), Positives = 288/288 (100%)
Frame = +3
Query: 492 MSSRKQGSQTRGQQSAEEDNFKKPTRSNMQRSKMRGASSGKKTAGPQQKNLEAALPGRWG 671
MSSRKQGSQTRGQQSAEEDNFKKPTRSNMQRSKMRGASSGKKTAGPQQKNLEAALPGRWG
Sbjct: 1 MSSRKQGSQTRGQQSAEEDNFKKPTRSNMQRSKMRGASSGKKTAGPQQKNLEAALPGRWG 60
Query: 672 GRSAETPPSGSVRKTRKNKQKTPGNGDGGSTSEAPQPPRKKRARADPTVESEEAFKNRME 851
GRSAETPPSGSVRKTRKNKQKTPGNGDGGSTSEAPQPPRKKRARADPTVESEEAFKNRME
Sbjct: 61 GRSAETPPSGSVRKTRKNKQKTPGNGDGGSTSEAPQPPRKKRARADPTVESEEAFKNRME 120
Query: 852 VKVKIPEELKPWLVEDWDLVTRQKQLFQLPAKKNVDAILEEYANCKKSQGNVDNKEYAVN 1031
VKVKIPEELKPWLVEDWDLVTRQKQLFQLPAKKNVDAILEEYANCKKSQGNVDNKEYAVN
Sbjct: 121 VKVKIPEELKPWLVEDWDLVTRQKQLFQLPAKKNVDAILEEYANCKKSQGNVDNKEYAVN 180
Query: 1032 EVVAGIKEYFNVMLGTQLLYKFERPQYAEILLAHPDAPMSQVYGAPHLLRLFVRIGAMLA 1211
EVVAGIKEYFNVMLGTQLLYKFERPQYAEILLAHPDAPMSQVYGAPHLLRLFVRIGAMLA
Sbjct: 181 EVVAGIKEYFNVMLGTQLLYKFERPQYAEILLAHPDAPMSQVYGAPHLLRLFVRIGAMLA 240
Query: 1212 YTPLDEKSLALLLGYLHDFLKYLAKNAASLFTASDYKVASAEYHRKAL 1355
YTPLDEKSLALLLGYLHDFLKYLAKNAASLFTASDYKVASAEYHRKAL
Sbjct: 241 YTPLDEKSLALLLGYLHDFLKYLAKNAASLFTASDYKVASAEYHRKAL 288
>ref|XP_003135318.1| PREDICTED: mortality factor 4-like protein 2-like isoform 4 [Sus
scrofa].
Length = 288
Score = 577 bits (1487), Expect = e-165
Identities = 288/288 (100%), Positives = 288/288 (100%)
Frame = +3
Query: 492 MSSRKQGSQTRGQQSAEEDNFKKPTRSNMQRSKMRGASSGKKTAGPQQKNLEAALPGRWG 671
MSSRKQGSQTRGQQSAEEDNFKKPTRSNMQRSKMRGASSGKKTAGPQQKNLEAALPGRWG
Sbjct: 1 MSSRKQGSQTRGQQSAEEDNFKKPTRSNMQRSKMRGASSGKKTAGPQQKNLEAALPGRWG 60
Query: 672 GRSAETPPSGSVRKTRKNKQKTPGNGDGGSTSEAPQPPRKKRARADPTVESEEAFKNRME 851
GRSAETPPSGSVRKTRKNKQKTPGNGDGGSTSEAPQPPRKKRARADPTVESEEAFKNRME
Sbjct: 61 GRSAETPPSGSVRKTRKNKQKTPGNGDGGSTSEAPQPPRKKRARADPTVESEEAFKNRME 120
Query: 852 VKVKIPEELKPWLVEDWDLVTRQKQLFQLPAKKNVDAILEEYANCKKSQGNVDNKEYAVN 1031
VKVKIPEELKPWLVEDWDLVTRQKQLFQLPAKKNVDAILEEYANCKKSQGNVDNKEYAVN
Sbjct: 121 VKVKIPEELKPWLVEDWDLVTRQKQLFQLPAKKNVDAILEEYANCKKSQGNVDNKEYAVN 180
Query: 1032 EVVAGIKEYFNVMLGTQLLYKFERPQYAEILLAHPDAPMSQVYGAPHLLRLFVRIGAMLA 1211
EVVAGIKEYFNVMLGTQLLYKFERPQYAEILLAHPDAPMSQVYGAPHLLRLFVRIGAMLA
Sbjct: 181 EVVAGIKEYFNVMLGTQLLYKFERPQYAEILLAHPDAPMSQVYGAPHLLRLFVRIGAMLA 240
Query: 1212 YTPLDEKSLALLLGYLHDFLKYLAKNAASLFTASDYKVASAEYHRKAL 1355
YTPLDEKSLALLLGYLHDFLKYLAKNAASLFTASDYKVASAEYHRKAL
Sbjct: 241 YTPLDEKSLALLLGYLHDFLKYLAKNAASLFTASDYKVASAEYHRKAL 288
>ref|XP_003360451.1| PREDICTED: mortality factor 4-like protein 2-like [Sus scrofa].
Length = 288
Score = 577 bits (1487), Expect = e-165
Identities = 288/288 (100%), Positives = 288/288 (100%)
Frame = +3
Query: 492 MSSRKQGSQTRGQQSAEEDNFKKPTRSNMQRSKMRGASSGKKTAGPQQKNLEAALPGRWG 671
MSSRKQGSQTRGQQSAEEDNFKKPTRSNMQRSKMRGASSGKKTAGPQQKNLEAALPGRWG
Sbjct: 1 MSSRKQGSQTRGQQSAEEDNFKKPTRSNMQRSKMRGASSGKKTAGPQQKNLEAALPGRWG 60
Query: 672 GRSAETPPSGSVRKTRKNKQKTPGNGDGGSTSEAPQPPRKKRARADPTVESEEAFKNRME 851
GRSAETPPSGSVRKTRKNKQKTPGNGDGGSTSEAPQPPRKKRARADPTVESEEAFKNRME
Sbjct: 61 GRSAETPPSGSVRKTRKNKQKTPGNGDGGSTSEAPQPPRKKRARADPTVESEEAFKNRME 120
Query: 852 VKVKIPEELKPWLVEDWDLVTRQKQLFQLPAKKNVDAILEEYANCKKSQGNVDNKEYAVN 1031
VKVKIPEELKPWLVEDWDLVTRQKQLFQLPAKKNVDAILEEYANCKKSQGNVDNKEYAVN
Sbjct: 121 VKVKIPEELKPWLVEDWDLVTRQKQLFQLPAKKNVDAILEEYANCKKSQGNVDNKEYAVN 180
Query: 1032 EVVAGIKEYFNVMLGTQLLYKFERPQYAEILLAHPDAPMSQVYGAPHLLRLFVRIGAMLA 1211
EVVAGIKEYFNVMLGTQLLYKFERPQYAEILLAHPDAPMSQVYGAPHLLRLFVRIGAMLA
Sbjct: 181 EVVAGIKEYFNVMLGTQLLYKFERPQYAEILLAHPDAPMSQVYGAPHLLRLFVRIGAMLA 240
Query: 1212 YTPLDEKSLALLLGYLHDFLKYLAKNAASLFTASDYKVASAEYHRKAL 1355
YTPLDEKSLALLLGYLHDFLKYLAKNAASLFTASDYKVASAEYHRKAL
Sbjct: 241 YTPLDEKSLALLLGYLHDFLKYLAKNAASLFTASDYKVASAEYHRKAL 288
>ref|XP_003135317.1| PREDICTED: mortality factor 4-like protein 2-like isoform 3 [Sus
scrofa].
Length = 288
Score = 577 bits (1487), Expect = e-165
Identities = 288/288 (100%), Positives = 288/288 (100%)
Frame = +3
Query: 492 MSSRKQGSQTRGQQSAEEDNFKKPTRSNMQRSKMRGASSGKKTAGPQQKNLEAALPGRWG 671
MSSRKQGSQTRGQQSAEEDNFKKPTRSNMQRSKMRGASSGKKTAGPQQKNLEAALPGRWG
Sbjct: 1 MSSRKQGSQTRGQQSAEEDNFKKPTRSNMQRSKMRGASSGKKTAGPQQKNLEAALPGRWG 60
Query: 672 GRSAETPPSGSVRKTRKNKQKTPGNGDGGSTSEAPQPPRKKRARADPTVESEEAFKNRME 851
GRSAETPPSGSVRKTRKNKQKTPGNGDGGSTSEAPQPPRKKRARADPTVESEEAFKNRME
Sbjct: 61 GRSAETPPSGSVRKTRKNKQKTPGNGDGGSTSEAPQPPRKKRARADPTVESEEAFKNRME 120
Query: 852 VKVKIPEELKPWLVEDWDLVTRQKQLFQLPAKKNVDAILEEYANCKKSQGNVDNKEYAVN 1031
VKVKIPEELKPWLVEDWDLVTRQKQLFQLPAKKNVDAILEEYANCKKSQGNVDNKEYAVN
Sbjct: 121 VKVKIPEELKPWLVEDWDLVTRQKQLFQLPAKKNVDAILEEYANCKKSQGNVDNKEYAVN 180
Query: 1032 EVVAGIKEYFNVMLGTQLLYKFERPQYAEILLAHPDAPMSQVYGAPHLLRLFVRIGAMLA 1211
EVVAGIKEYFNVMLGTQLLYKFERPQYAEILLAHPDAPMSQVYGAPHLLRLFVRIGAMLA
Sbjct: 181 EVVAGIKEYFNVMLGTQLLYKFERPQYAEILLAHPDAPMSQVYGAPHLLRLFVRIGAMLA 240
Query: 1212 YTPLDEKSLALLLGYLHDFLKYLAKNAASLFTASDYKVASAEYHRKAL 1355
YTPLDEKSLALLLGYLHDFLKYLAKNAASLFTASDYKVASAEYHRKAL
Sbjct: 241 YTPLDEKSLALLLGYLHDFLKYLAKNAASLFTASDYKVASAEYHRKAL 288
>ref|XP_003360450.1| PREDICTED: mortality factor 4-like protein 2-like [Sus scrofa].
Length = 288
Score = 577 bits (1487), Expect = e-165
Identities = 288/288 (100%), Positives = 288/288 (100%)
Frame = +3
Query: 492 MSSRKQGSQTRGQQSAEEDNFKKPTRSNMQRSKMRGASSGKKTAGPQQKNLEAALPGRWG 671
MSSRKQGSQTRGQQSAEEDNFKKPTRSNMQRSKMRGASSGKKTAGPQQKNLEAALPGRWG
Sbjct: 1 MSSRKQGSQTRGQQSAEEDNFKKPTRSNMQRSKMRGASSGKKTAGPQQKNLEAALPGRWG 60
Query: 672 GRSAETPPSGSVRKTRKNKQKTPGNGDGGSTSEAPQPPRKKRARADPTVESEEAFKNRME 851
GRSAETPPSGSVRKTRKNKQKTPGNGDGGSTSEAPQPPRKKRARADPTVESEEAFKNRME
Sbjct: 61 GRSAETPPSGSVRKTRKNKQKTPGNGDGGSTSEAPQPPRKKRARADPTVESEEAFKNRME 120
Query: 852 VKVKIPEELKPWLVEDWDLVTRQKQLFQLPAKKNVDAILEEYANCKKSQGNVDNKEYAVN 1031
VKVKIPEELKPWLVEDWDLVTRQKQLFQLPAKKNVDAILEEYANCKKSQGNVDNKEYAVN
Sbjct: 121 VKVKIPEELKPWLVEDWDLVTRQKQLFQLPAKKNVDAILEEYANCKKSQGNVDNKEYAVN 180
Query: 1032 EVVAGIKEYFNVMLGTQLLYKFERPQYAEILLAHPDAPMSQVYGAPHLLRLFVRIGAMLA 1211
EVVAGIKEYFNVMLGTQLLYKFERPQYAEILLAHPDAPMSQVYGAPHLLRLFVRIGAMLA
Sbjct: 181 EVVAGIKEYFNVMLGTQLLYKFERPQYAEILLAHPDAPMSQVYGAPHLLRLFVRIGAMLA 240
Query: 1212 YTPLDEKSLALLLGYLHDFLKYLAKNAASLFTASDYKVASAEYHRKAL 1355
YTPLDEKSLALLLGYLHDFLKYLAKNAASLFTASDYKVASAEYHRKAL
Sbjct: 241 YTPLDEKSLALLLGYLHDFLKYLAKNAASLFTASDYKVASAEYHRKAL 288
>ref|XP_003135315.1| PREDICTED: mortality factor 4-like protein 2-like isoform 1 [Sus
scrofa].
Length = 288
Score = 577 bits (1487), Expect = e-165
Identities = 288/288 (100%), Positives = 288/288 (100%)
Frame = +3
Query: 492 MSSRKQGSQTRGQQSAEEDNFKKPTRSNMQRSKMRGASSGKKTAGPQQKNLEAALPGRWG 671
MSSRKQGSQTRGQQSAEEDNFKKPTRSNMQRSKMRGASSGKKTAGPQQKNLEAALPGRWG
Sbjct: 1 MSSRKQGSQTRGQQSAEEDNFKKPTRSNMQRSKMRGASSGKKTAGPQQKNLEAALPGRWG 60
Query: 672 GRSAETPPSGSVRKTRKNKQKTPGNGDGGSTSEAPQPPRKKRARADPTVESEEAFKNRME 851
GRSAETPPSGSVRKTRKNKQKTPGNGDGGSTSEAPQPPRKKRARADPTVESEEAFKNRME
Sbjct: 61 GRSAETPPSGSVRKTRKNKQKTPGNGDGGSTSEAPQPPRKKRARADPTVESEEAFKNRME 120
Query: 852 VKVKIPEELKPWLVEDWDLVTRQKQLFQLPAKKNVDAILEEYANCKKSQGNVDNKEYAVN 1031
VKVKIPEELKPWLVEDWDLVTRQKQLFQLPAKKNVDAILEEYANCKKSQGNVDNKEYAVN
Sbjct: 121 VKVKIPEELKPWLVEDWDLVTRQKQLFQLPAKKNVDAILEEYANCKKSQGNVDNKEYAVN 180
Query: 1032 EVVAGIKEYFNVMLGTQLLYKFERPQYAEILLAHPDAPMSQVYGAPHLLRLFVRIGAMLA 1211
EVVAGIKEYFNVMLGTQLLYKFERPQYAEILLAHPDAPMSQVYGAPHLLRLFVRIGAMLA
Sbjct: 181 EVVAGIKEYFNVMLGTQLLYKFERPQYAEILLAHPDAPMSQVYGAPHLLRLFVRIGAMLA 240
Query: 1212 YTPLDEKSLALLLGYLHDFLKYLAKNAASLFTASDYKVASAEYHRKAL 1355
YTPLDEKSLALLLGYLHDFLKYLAKNAASLFTASDYKVASAEYHRKAL
Sbjct: 241 YTPLDEKSLALLLGYLHDFLKYLAKNAASLFTASDYKVASAEYHRKAL 288
>ref|XP_003356693.1| PREDICTED: mortality factor 4-like protein 1 [Sus scrofa].
Length = 377
Score = 409 bits (1052), Expect(2) = e-120
Identities = 205/272 (75%), Positives = 226/272 (83%)
Frame = +3
Query: 540 EEDNFKKPTRSNMQRSKMRGASSGKKTAGPQQKNLEAALPGRWGGRSAETPPSGSVRKTR 719
++ +K + KMRGA+ GKKT+G QQKN+E KT+
Sbjct: 126 KQRELQKANQEQYAEGKMRGAAPGKKTSGLQQKNVEV--------------------KTK 165
Query: 720 KNKQKTPGNGDGGSTSEAPQPPRKKRARADPTVESEEAFKNRMEVKVKIPEELKPWLVED 899
KNKQKTPGNG+GGSTSE PQPPRKKRAR DPTVE+EE F NR+EVKVKIPEELKPWLV+D
Sbjct: 166 KNKQKTPGNGEGGSTSETPQPPRKKRARVDPTVENEETFMNRVEVKVKIPEELKPWLVDD 225
Query: 900 WDLVTRQKQLFQLPAKKNVDAILEEYANCKKSQGNVDNKEYAVNEVVAGIKEYFNVMLGT 1079
WDL+TRQKQLF LPAKKNVD+ILE+YAN KKS+GN DNKEYAVNEVVAGIKEYFNVMLGT
Sbjct: 226 WDLITRQKQLFYLPAKKNVDSILEDYANYKKSRGNTDNKEYAVNEVVAGIKEYFNVMLGT 285
Query: 1080 QLLYKFERPQYAEILLAHPDAPMSQVYGAPHLLRLFVRIGAMLAYTPLDEKSLALLLGYL 1259
QLLYKFERPQYAEIL HPDAPMSQVYGAPHLLRLFVRIGAMLAYTPLDEKSLALLL YL
Sbjct: 286 QLLYKFERPQYAEILADHPDAPMSQVYGAPHLLRLFVRIGAMLAYTPLDEKSLALLLNYL 345
Query: 1260 HDFLKYLAKNAASLFTASDYKVASAEYHRKAL 1355
HDFLKYLAKN+A+LF+ASDY+VA EYHRKA+
Sbjct: 346 HDFLKYLAKNSATLFSASDYEVAPPEYHRKAV 377
Score = 42.4 bits (98), Expect(2) = e-120
Identities = 20/27 (74%), Positives = 22/27 (81%)
Frame = +1
Query: 466 TGWNKNRVE*VPESRVLKLVDNNLQKK 546
+GWNKN E VPESRVLK VD NLQK+
Sbjct: 101 SGWNKNWDEWVPESRVLKYVDTNLQKQ 127
>ref|XP_001927776.1| PREDICTED: mortality factor 4-like protein 1 isoform 1 [Sus scrofa].
Length = 323
Score = 409 bits (1052), Expect(2) = e-120
Identities = 205/272 (75%), Positives = 226/272 (83%)
Frame = +3
Query: 540 EEDNFKKPTRSNMQRSKMRGASSGKKTAGPQQKNLEAALPGRWGGRSAETPPSGSVRKTR 719
++ +K + KMRGA+ GKKT+G QQKN+E KT+
Sbjct: 72 KQRELQKANQEQYAEGKMRGAAPGKKTSGLQQKNVEV--------------------KTK 111
Query: 720 KNKQKTPGNGDGGSTSEAPQPPRKKRARADPTVESEEAFKNRMEVKVKIPEELKPWLVED 899
KNKQKTPGNG+GGSTSE PQPPRKKRAR DPTVE+EE F NR+EVKVKIPEELKPWLV+D
Sbjct: 112 KNKQKTPGNGEGGSTSETPQPPRKKRARVDPTVENEETFMNRVEVKVKIPEELKPWLVDD 171
Query: 900 WDLVTRQKQLFQLPAKKNVDAILEEYANCKKSQGNVDNKEYAVNEVVAGIKEYFNVMLGT 1079
WDL+TRQKQLF LPAKKNVD+ILE+YAN KKS+GN DNKEYAVNEVVAGIKEYFNVMLGT
Sbjct: 172 WDLITRQKQLFYLPAKKNVDSILEDYANYKKSRGNTDNKEYAVNEVVAGIKEYFNVMLGT 231
Query: 1080 QLLYKFERPQYAEILLAHPDAPMSQVYGAPHLLRLFVRIGAMLAYTPLDEKSLALLLGYL 1259
QLLYKFERPQYAEIL HPDAPMSQVYGAPHLLRLFVRIGAMLAYTPLDEKSLALLL YL
Sbjct: 232 QLLYKFERPQYAEILADHPDAPMSQVYGAPHLLRLFVRIGAMLAYTPLDEKSLALLLNYL 291
Query: 1260 HDFLKYLAKNAASLFTASDYKVASAEYHRKAL 1355
HDFLKYLAKN+A+LF+ASDY+VA EYHRKA+
Sbjct: 292 HDFLKYLAKNSATLFSASDYEVAPPEYHRKAV 323
Score = 42.4 bits (98), Expect(2) = e-120
Identities = 20/27 (74%), Positives = 22/27 (81%)
Frame = +1
Query: 466 TGWNKNRVE*VPESRVLKLVDNNLQKK 546
+GWNKN E VPESRVLK VD NLQK+
Sbjct: 47 SGWNKNWDEWVPESRVLKYVDTNLQKQ 73
>ref|XP_001927789.1| PREDICTED: mortality factor 4-like protein 1 isoform 2 [Sus scrofa].
Length = 362
Score = 410 bits (1053), Expect = e-114
Identities = 233/368 (63%), Positives = 261/368 (70%)
Frame = +3
Query: 252 KNWILVSGYHQKS*VCCIVRIRRSDPDCRTLLITESWVVSPTSSFPTIPEDL*GSIWENT 431
K +I SG+++KS VR RRS+ +TL E V + FP +PE
Sbjct: 41 KYFIHYSGWNKKS----AVRPRRSE---KTLKRREDIV----ALFP-VPEGAPSVHHPLL 88
Query: 432 RSSWKGKKEEDYWLE*KQG*MSSRKQGSQTRGQQSAEEDNFKKPTRSNMQRSKMRGASSG 611
SSW D W+ SR Q E +K + KMRGA+ G
Sbjct: 89 TSSW------DEWVP------ESRVLKYVDTNLQKQRE--LQKANQEQYAEGKMRGAAPG 134
Query: 612 KKTAGPQQKNLEAALPGRWGGRSAETPPSGSVRKTRKNKQKTPGNGDGGSTSEAPQPPRK 791
KKT+G QQKN+E KT+KNKQKTPGNG+GGSTSE PQPPRK
Sbjct: 135 KKTSGLQQKNVEV--------------------KTKKNKQKTPGNGEGGSTSETPQPPRK 174
Query: 792 KRARADPTVESEEAFKNRMEVKVKIPEELKPWLVEDWDLVTRQKQLFQLPAKKNVDAILE 971
KRAR DPTVE+EE F NR+EVKVKIPEELKPWLV+DWDL+TRQKQLF LPAKKNVD+ILE
Sbjct: 175 KRARVDPTVENEETFMNRVEVKVKIPEELKPWLVDDWDLITRQKQLFYLPAKKNVDSILE 234
Query: 972 EYANCKKSQGNVDNKEYAVNEVVAGIKEYFNVMLGTQLLYKFERPQYAEILLAHPDAPMS 1151
+YAN KKS+GN DNKEYAVNEVVAGIKEYFNVMLGTQLLYKFERPQYAEIL HPDAPMS
Sbjct: 235 DYANYKKSRGNTDNKEYAVNEVVAGIKEYFNVMLGTQLLYKFERPQYAEILADHPDAPMS 294
Query: 1152 QVYGAPHLLRLFVRIGAMLAYTPLDEKSLALLLGYLHDFLKYLAKNAASLFTASDYKVAS 1331
QVYGAPHLLRLFVRIGAMLAYTPLDEKSLALLL YLHDFLKYLAKN+A+LF+ASDY+VA
Sbjct: 295 QVYGAPHLLRLFVRIGAMLAYTPLDEKSLALLLNYLHDFLKYLAKNSATLFSASDYEVAP 354
Query: 1332 AEYHRKAL 1355
EYHRKA+
Sbjct: 355 PEYHRKAV 362
>ref|XP_003134973.1| PREDICTED: male-specific lethal 3 homolog [Sus scrofa].
Length = 522
Score = 50.4 bits (119), Expect = 2e-06
Identities = 29/67 (43%), Positives = 39/67 (58%)
Frame = +3
Query: 1143 PMSQVYGAPHLLRLFVRIGAMLAYTPLDEKSLALLLGYLHDFLKYLAKNAASLFTASDYK 1322
P S +YGA HLLRLFV++ +L EK+L LL + FL++LA+ F S Y
Sbjct: 447 PPSYIYGAQHLLRLFVKLPEILGKMSFSEKNLKALLKHFDLFLRFLAEYHDDFFPESAY- 505
Query: 1323 VASAEYH 1343
VA+ E H
Sbjct: 506 VAACEAH 512
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 34,579,872
Number of extensions: 927291
Number of successful extensions: 3492
Number of sequences better than 1.0e-05: 10
Number of HSP's gapped: 3466
Number of HSP's successfully gapped: 12
Length of query: 469
Length of database: 11,343,932
Length adjustment: 103
Effective length of query: 366
Effective length of database: 8,779,541
Effective search space: 3213312006
Effective search space used: 3213312006
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-000686
(1408 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_ChrX 1768 0.0
Sscrofa_Chr07 176 2e-41
>Sscrofa_ChrX
|| Length = 144288218
Score = 1768 bits (892), Expect = 0.0
Identities = 925/941 (98%)
Strand = Plus / Minus
Query: 468 tggttggaataaaaacagggttgaatgagttccagaaagcagggttctcaaactcgtgga 527
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 98344126 tggttggaataaaaacagggttgaatgagttccagaaagcagggttctcaaactcgtgga 98344067
Query: 528 caacaatctgcagaagaagacaacttcaaaaaaccaactagaagcaatatgcagagaagt 587
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 98344066 caacaatctgcagaagaagacaacttcaaaaaaccaactagaagcaatatgcagagaagt 98344007
Query: 588 aagatgagaggagcctcctcaggaaagaagaccgctggtccacagcagaagaatctggaa 647
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 98344006 aagatgagaggagcctcctcaggaaagaagaccgctggtccacagcagaagaatctggaa 98343947
Query: 648 gcagcactccccggcaggtnnnnnnntcgctctgcagagannnnnnnttcggggtccgtg 707
||||||||||||||||||| |||||||||||||| |||||||||||||
Sbjct: 98343946 gcagcactccccggcaggtgggggggtcgctctgcagagacccccccttcggggtccgtg 98343887
Query: 708 aggaagaccagaaagaacaaacagaagacccctggaaatggagatggtggcagtaccagc 767
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 98343886 aggaagaccagaaagaacaaacagaagacccctggaaatggagatggtggcagtaccagc 98343827
Query: 768 gaagcacctcagccacctcggaagaaaagggcccgggctgaccccactgtggaaagtgag 827
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 98343826 gaagcacctcagccacctcggaagaaaagggcccgggctgaccccactgtggaaagtgag 98343767
Query: 828 gaggcatttaagaatagaatggaagtgaaagtgaagattcctgaagaattaaaaccatgg 887
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 98343766 gaggcatttaagaatagaatggaagtgaaagtgaagattcctgaagaattaaaaccatgg 98343707
Query: 888 ctagttgaggactgggacttagttaccaggcagaagcagctctttcaactccctgctaag 947
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 98343706 ctagttgaggactgggacttagttaccaggcagaagcagctctttcaactccctgctaag 98343647
Query: 948 aaaaatgtagatgccattctggaagagtacgcaaattgcaagaaatcacagggaaatgtt 1007
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 98343646 aaaaatgtagatgccattctggaagagtacgcaaattgcaagaaatcacagggaaatgtt 98343587
Query: 1008 gataataaggagtatgcggttaatgaagttgtggcaggaataaaagagtatttcaatgtg 1067
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 98343586 gataataaggagtatgcggttaatgaagttgtggcaggaataaaagagtatttcaatgtg 98343527
Query: 1068 atgttgggcactcagctgctctataaatttgagaggccccagtatgccgaaatcctcttg 1127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 98343526 atgttgggcactcagctgctctataaatttgagaggccccagtatgccgaaatcctcttg 98343467
Query: 1128 gctcaccctgatgcgcccatgtcccaggtttatggggcaccacacctactgagattattt 1187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 98343466 gctcaccctgatgcgcccatgtcccaggtttatggggcaccacacctactgagattattt 98343407
Query: 1188 gtgagaattggagcaatgttggcatatacgccccttgatgagaagagccttgcattattg 1247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 98343406 gtgagaattggagcaatgttggcatatacgccccttgatgagaagagccttgcattattg 98343347
Query: 1248 ttgggctatctgcatgatttcctaaaatacctggcaaagaatgctgcgtctctgtttact 1307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 98343346 ttgggctatctgcatgatttcctaaaatacctggcaaagaatgctgcgtctctgtttact 98343287
Query: 1308 gccagtgattataaagtggcttctgctgagtaccaccgcaaagccctgtgagggtctcct 1367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 98343286 gccagtgattataaagtggcttctgctgagtaccaccgcaaagccctgtgagggtctcct 98343227
Query: 1368 gaccgctcgctngtatgtctggtatctgtaaacactctttt 1408
||||||||||| ||||||||||||||||||||||||||||
Sbjct: 98343226 gaccgctcgctgttatgtctggtatctgtaaacactctttt 98343186
Score = 519 bits (262), Expect = e-144
Identities = 269/270 (99%), Gaps = 1/270 (0%)
Strand = Plus / Minus
Query: 6 accgtgaaga-gcaggttgctagcacccgcctttactgcggctaagtgtcattgctgacg 64
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 98353833 accgtgaagaagcaggttgctagcacccgcctttactgcggctaagtgtcattgctgacg 98353774
Query: 65 tggtgggcttccaccaatcatttggttatggaacattctaaaacttaggcaagacgattg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 98353773 tggtgggcttccaccaatcatttggttatggaacattctaaaacttaggcaagacgattg 98353714
Query: 125 tgattggctagagggcgtaagcccgcctccagggtgacgtgtctgcctatggatatcagt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 98353713 tgattggctagagggcgtaagcccgcctccagggtgacgtgtctgcctatggatatcagt 98353654
Query: 185 tgccagagaaacctggctttactatggcggttggagggtcggcagtgatcacacgtcggc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 98353653 tgccagagaaacctggctttactatggcggttggagggtcggcagtgatcacacgtcggc 98353594
Query: 245 tgctggaaagaactggattctcgtttcagg 274
||||||||||||||||||||||||||||||
Sbjct: 98353593 tgctggaaagaactggattctcgtttcagg 98353564
Score = 210 bits (106), Expect = 2e-51
Identities = 106/106 (100%)
Strand = Plus / Minus
Query: 362 ggttgtgtctcccacctcatctttccctaccatcccagaagatctataaggttccatctg 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 98345346 ggttgtgtctcccacctcatctttccctaccatcccagaagatctataaggttccatctg 98345287
Query: 422 ggaaaacactagaagttcttggaagggaaagaaggaagaggattac 467
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 98345286 ggaaaacactagaagttcttggaagggaaagaaggaagaggattac 98345241
Score = 184 bits (93), Expect = 9e-44
Identities = 93/93 (100%)
Strand = Plus / Minus
Query: 272 aggctaccatcaaaaaagctaagtttgctgtatagtaaggatcagaagatctgatcctga 331
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 98352129 aggctaccatcaaaaaagctaagtttgctgtatagtaaggatcagaagatctgatcctga 98352070
Query: 332 ttgcagaacattgctgattacagaatcttgggt 364
|||||||||||||||||||||||||||||||||
Sbjct: 98352069 ttgcagaacattgctgattacagaatcttgggt 98352037
>Sscrofa_Chr07
|| Length = 134764511
Score = 176 bits (89), Expect = 2e-41
Identities = 152/173 (87%)
Strand = Plus / Plus
Query: 1016 ggagtatgcggttaatgaagttgtggcaggaataaaagagtatttcaatgtgatgttggg 1075
||||||||| |||||||||||||||||||| ||||| || || |||||||| ||||||||
Sbjct: 53610948 ggagtatgctgttaatgaagttgtggcagggataaaggaatacttcaatgtaatgttggg 53611007
Query: 1076 cactcagctgctctataaatttgagaggccccagtatgccgaaatcctcttggctcaccc 1135
||||||||| ||||| || |||||||| || |||||||| ||||| ||| | ||||||
Sbjct: 53611008 cactcagctactctacaagtttgagagaccacagtatgctgaaattctcgccgatcaccc 53611067
Query: 1136 tgatgcgcccatgtcccaggtttatggggcaccacacctactgagattatttg 1188
|||||||||||||||||||| ||||| |||||||| ||||||||||||||||
Sbjct: 53611068 cgatgcgcccatgtcccaggtgtatggagcaccacatctactgagattatttg 53611120
Score = 73.8 bits (37), Expect = 2e-10
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 738 cctggaaatggagatggtggcagtaccagcgaagcacctcagccacctcggaagaaaagg 797
|||||||||||||| ||||| |||||||| || |||||||||| ||||| |||||||||
Sbjct: 53606393 cctggaaatggagaaggtgggagtaccagtgagacacctcagcctcctcgcaagaaaagg 53606452
Query: 798 gcccg 802
|||||
Sbjct: 53606453 gcccg 53606457
Score = 71.9 bits (36), Expect = 9e-10
Identities = 54/60 (90%)
Strand = Plus / Plus
Query: 849 gaagtgaaagtgaagattcctgaagaattaaaaccatggctagttgaggactgggactta 908
||||| ||||| ||||||||||||||| | ||||||||||| ||||| ||||||||||||
Sbjct: 53608566 gaagttaaagtaaagattcctgaagaactcaaaccatggcttgttgatgactgggactta 53608625
Score = 69.9 bits (35), Expect = 4e-09
Identities = 50/55 (90%)
Strand = Plus / Plus
Query: 1192 gaattggagcaatgttggcatatacgccccttgatgagaagagccttgcattatt 1246
||||||||||||||||||| ||||| || || ||||||||||||||||| |||||
Sbjct: 53611328 gaattggagcaatgttggcctatacacctctggatgagaagagccttgctttatt 53611382
Score = 60.0 bits (30), Expect = 3e-06
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 489 tgaatgagttccagaaagcagggttctcaaactcgtggacaacaatctgcagaa 542
|||||| |||||||||||||| || |||||| |||||||| ||||||||||||
Sbjct: 53603287 tgaatgggttccagaaagcagagtactcaaatacgtggacaccaatctgcagaa 53603340
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 42,715,407
Number of extensions: 343
Number of successful extensions: 343
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 342
Number of HSP's successfully gapped: 9
Length of query: 1408
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 1387
Effective length of database: 2,808,413,156
Effective search space: 3895269047372
Effective search space used: 3895269047372
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)