Animal-Genome cDNA 20110601C-000719

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-000719
         (1148 letters)

Database: RefSeq49_BP.fasta 
           33,088 sequences; 17,681,374 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001030558.1| Friend of PRMT1 protein [Bos taurus].             134   2e-31

>ref|NP_001030558.1| Friend of PRMT1 protein [Bos taurus].
          Length = 248

 Score =  134 bits (336), Expect = 2e-31
 Identities = 82/147 (55%), Positives = 82/147 (55%)
 Frame = +2

Query: 395 MAAQSAPKVVLKSTTKMSLNERFTNMLKNKQPMPVNIXXXXXXXXXXXXXXXXXXXXXME 574
           MAAQSAPKVVLKSTTKMSLNERFTNMLKNKQPMPVNI                     ME
Sbjct: 1   MAAQSAPKVVLKSTTKMSLNERFTNMLKNKQPMPVNIRASMQQQQQLASARNRRLAQQME 60

Query: 575 NRPSVQAALKLKQSLKQRLGKSNIQXXXXXXXXXXXXXXXXXXXXXXXQXXXXXXXXXXX 754
           NRPSVQAALKLKQSLKQRLGKSNIQ                       Q           
Sbjct: 61  NRPSVQAALKLKQSLKQRLGKSNIQARLGRPIGALARGAIGGRGLPIIQRGLPRGGLRGG 120

Query: 755 XXXXXXXXXXMSLRGQNLLRGGRAVAP 835
                     MSLRGQNLLRGGRAVAP
Sbjct: 121 RATRTLLRGGMSLRGQNLLRGGRAVAP 147



 Score = 79.0 bits (193), Expect = 8e-15
 Identities = 38/39 (97%), Positives = 38/39 (97%)
 Frame = +3

Query: 1017 RPVLTKEQLDNQLDAYMSKTKGHLDAELDAYMAQTDP*T 1133
            RPVLTKEQLDNQLDAYMSKTKGHLDAELDAYMAQTDP T
Sbjct: 208  RPVLTKEQLDNQLDAYMSKTKGHLDAELDAYMAQTDPET 246


  Database: RefSeq49_BP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 17,681,374
  Number of sequences in database:  33,088
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 38,109,768
Number of extensions: 1051422
Number of successful extensions: 3782
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 3769
Number of HSP's successfully gapped: 2
Length of query: 382
Length of database: 17,681,374
Length adjustment: 104
Effective length of query: 278
Effective length of database: 14,240,222
Effective search space: 3958781716
Effective search space used: 3958781716
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-000719
         (1148 letters)

Database: RefSeq49_CP.fasta 
           33,336 sequences; 18,874,504 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_537264.2| PREDICTED: similar to Protein HT031 homolog iso...   129   5e-30
Alignment   gi|XP_852627.1| PREDICTED: similar to Protein HT031 homolog iso...   119   7e-27
Alignment   gi|XP_866068.1| PREDICTED: hypothetical protein XP_860975 isofo...    83   4e-16
Alignment   gi|XP_866086.1| PREDICTED: hypothetical protein XP_860993 isofo...    79   8e-15
Alignment   gi|XP_866040.1| PREDICTED: similar to Protein HT031 homolog iso...    66   5e-11
Alignment   gi|XP_848413.1| PREDICTED: similar to TPTE and PTEN homologous ...    62   1e-09
Alignment   gi|XP_851439.1| PREDICTED: similar to 40S ribosomal protein S2 ...    55   1e-07

>ref|XP_537264.2| PREDICTED: similar to Protein HT031 homolog isoform 1 [Canis
           familiaris].
          Length = 249

 Score =  129 bits (324), Expect = 5e-30
 Identities = 82/148 (55%), Positives = 82/148 (55%), Gaps = 1/148 (0%)
 Frame = +2

Query: 395 MAAQSAPKVVLKSTTKMSLNERFTNMLKNKQPMPVNIXXXXXXXXXXXXXXXXXXXXXME 574
           MAAQSAPKVVLKSTTKMSLNERFTNMLKNKQPMPVNI                     ME
Sbjct: 1   MAAQSAPKVVLKSTTKMSLNERFTNMLKNKQPMPVNIRASMQQQQQLASARNRRLAQQME 60

Query: 575 NRPSVQAALKLKQ-SLKQRLGKSNIQXXXXXXXXXXXXXXXXXXXXXXXQXXXXXXXXXX 751
           NRPSVQAALKLKQ SLKQRLGKSNIQ                       Q          
Sbjct: 61  NRPSVQAALKLKQKSLKQRLGKSNIQARLGRPIGTLARGAIGGRGLPIIQRGLPRGGLRG 120

Query: 752 XXXXXXXXXXXMSLRGQNLLRGGRAVAP 835
                      MSLRGQNLLRGGRAVAP
Sbjct: 121 GRATRTLLRGGMSLRGQNLLRGGRAVAP 148



 Score = 79.0 bits (193), Expect = 8e-15
 Identities = 38/39 (97%), Positives = 38/39 (97%)
 Frame = +3

Query: 1017 RPVLTKEQLDNQLDAYMSKTKGHLDAELDAYMAQTDP*T 1133
            RPVLTKEQLDNQLDAYMSKTKGHLDAELDAYMAQTDP T
Sbjct: 209  RPVLTKEQLDNQLDAYMSKTKGHLDAELDAYMAQTDPET 247


>ref|XP_852627.1| PREDICTED: similar to Protein HT031 homolog isoform 2 [Canis
           familiaris].
          Length = 276

 Score =  119 bits (297), Expect = 7e-27
 Identities = 82/175 (46%), Positives = 82/175 (46%), Gaps = 28/175 (16%)
 Frame = +2

Query: 395 MAAQSAPKVVLKSTTKMSLNERFTNMLKNKQPMPVNIXXXXXXXXXXXXXXXXXXXXXME 574
           MAAQSAPKVVLKSTTKMSLNERFTNMLKNKQPMPVNI                     ME
Sbjct: 1   MAAQSAPKVVLKSTTKMSLNERFTNMLKNKQPMPVNIRASMQQQQQLASARNRRLAQQME 60

Query: 575 NRPSVQAALKLKQ----------------------------SLKQRLGKSNIQXXXXXXX 670
           NRPSVQAALKLKQ                            SLKQRLGKSNIQ       
Sbjct: 61  NRPSVQAALKLKQTLYASPDSGCGRICPSCGWASGGRCHATSLKQRLGKSNIQARLGRPI 120

Query: 671 XXXXXXXXXXXXXXXXQXXXXXXXXXXXXXXXXXXXXXMSLRGQNLLRGGRAVAP 835
                           Q                     MSLRGQNLLRGGRAVAP
Sbjct: 121 GTLARGAIGGRGLPIIQRGLPRGGLRGGRATRTLLRGGMSLRGQNLLRGGRAVAP 175



 Score = 79.0 bits (193), Expect = 8e-15
 Identities = 38/39 (97%), Positives = 38/39 (97%)
 Frame = +3

Query: 1017 RPVLTKEQLDNQLDAYMSKTKGHLDAELDAYMAQTDP*T 1133
            RPVLTKEQLDNQLDAYMSKTKGHLDAELDAYMAQTDP T
Sbjct: 236  RPVLTKEQLDNQLDAYMSKTKGHLDAELDAYMAQTDPET 274


>ref|XP_866068.1| PREDICTED: hypothetical protein XP_860975 isoform 4 [Canis
           familiaris].
          Length = 224

 Score = 83.2 bits (204), Expect = 4e-16
 Identities = 57/123 (46%), Positives = 57/123 (46%), Gaps = 1/123 (0%)
 Frame = +2

Query: 470 MLKNKQPMPVNIXXXXXXXXXXXXXXXXXXXXXMENRPSVQAALKLKQ-SLKQRLGKSNI 646
           MLKNKQPMPVNI                     MENRPSVQAALKLKQ SLKQRLGKSNI
Sbjct: 1   MLKNKQPMPVNIRASMQQQQQLASARNRRLAQQMENRPSVQAALKLKQKSLKQRLGKSNI 60

Query: 647 QXXXXXXXXXXXXXXXXXXXXXXXQXXXXXXXXXXXXXXXXXXXXXMSLRGQNLLRGGRA 826
           Q                       Q                     MSLRGQNLLRGGRA
Sbjct: 61  QARLGRPIGTLARGAIGGRGLPIIQRGLPRGGLRGGRATRTLLRGGMSLRGQNLLRGGRA 120

Query: 827 VAP 835
           VAP
Sbjct: 121 VAP 123



 Score = 79.0 bits (193), Expect = 8e-15
 Identities = 38/39 (97%), Positives = 38/39 (97%)
 Frame = +3

Query: 1017 RPVLTKEQLDNQLDAYMSKTKGHLDAELDAYMAQTDP*T 1133
            RPVLTKEQLDNQLDAYMSKTKGHLDAELDAYMAQTDP T
Sbjct: 184  RPVLTKEQLDNQLDAYMSKTKGHLDAELDAYMAQTDPET 222


>ref|XP_866086.1| PREDICTED: hypothetical protein XP_860993 isoform 5 [Canis
            familiaris].
          Length = 118

 Score = 79.0 bits (193), Expect = 8e-15
 Identities = 38/39 (97%), Positives = 38/39 (97%)
 Frame = +3

Query: 1017 RPVLTKEQLDNQLDAYMSKTKGHLDAELDAYMAQTDP*T 1133
            RPVLTKEQLDNQLDAYMSKTKGHLDAELDAYMAQTDP T
Sbjct: 78   RPVLTKEQLDNQLDAYMSKTKGHLDAELDAYMAQTDPET 116


>ref|XP_866040.1| PREDICTED: similar to Protein HT031 homolog isoform 3 [Canis
           familiaris].
          Length = 60

 Score = 66.2 bits (160), Expect = 5e-11
 Identities = 36/57 (63%), Positives = 36/57 (63%)
 Frame = +2

Query: 443 MSLNERFTNMLKNKQPMPVNIXXXXXXXXXXXXXXXXXXXXXMENRPSVQAALKLKQ 613
           MSLNERFTNMLKNKQPMPVNI                     MENRPSVQAALKLKQ
Sbjct: 1   MSLNERFTNMLKNKQPMPVNIRASMQQQQQLASARNRRLAQQMENRPSVQAALKLKQ 57


>ref|XP_848413.1| PREDICTED: similar to TPTE and PTEN homologous inositol lipid
           phosphatase isoform gamma [Canis familiaris].
          Length = 692

 Score = 61.6 bits (148), Expect = 1e-09
 Identities = 31/38 (81%), Positives = 32/38 (84%)
 Frame = -3

Query: 495 GIGCLFFSILVKRSFRDILVVLFSTTFGADCAAIFKSR 382
           GIGCLF SILVKRS+RDILVVL ST  GADCAAI K R
Sbjct: 100 GIGCLFSSILVKRSWRDILVVLCSTALGADCAAILKPR 137


>ref|XP_851439.1| PREDICTED: similar to 40S ribosomal protein S2 [Canis familiaris].
          Length = 359

 Score = 55.5 bits (132), Expect = 1e-07
 Identities = 27/35 (77%), Positives = 29/35 (82%)
 Frame = -1

Query: 1103 IQFSIQVSFSFGHVCIQLVVQLLLGQYRASKGTFP 999
            I   IQVSF F HVCIQLVVQLLLGQ+RAS+GT P
Sbjct: 169  IHLGIQVSFCFRHVCIQLVVQLLLGQHRASEGTCP 203


  Database: RefSeq49_CP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,874,504
  Number of sequences in database:  33,336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 39,523,869
Number of extensions: 1035398
Number of successful extensions: 3803
Number of sequences better than 1.0e-05: 7
Number of HSP's gapped: 3787
Number of HSP's successfully gapped: 11
Length of query: 382
Length of database: 18,874,504
Length adjustment: 105
Effective length of query: 277
Effective length of database: 15,374,224
Effective search space: 4258660048
Effective search space used: 4258660048
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-000719
         (1148 letters)

Database: RefSeq49_HP.fasta 
           32,964 sequences; 18,297,164 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_056422.2| chromatin target of PRMT1 protein isoform 1 [Ho...   131   1e-30
Alignment   gi|NP_001193541.1| chromatin target of PRMT1 protein isoform 2 ...   127   3e-29

>ref|NP_056422.2| chromatin target of PRMT1 protein isoform 1 [Homo sapiens].
          Length = 248

 Score =  131 bits (330), Expect = 1e-30
 Identities = 81/147 (55%), Positives = 81/147 (55%)
 Frame = +2

Query: 395 MAAQSAPKVVLKSTTKMSLNERFTNMLKNKQPMPVNIXXXXXXXXXXXXXXXXXXXXXME 574
           MAAQSAPKVVLKSTTKMSLNERFTNMLKNKQP PVNI                     ME
Sbjct: 1   MAAQSAPKVVLKSTTKMSLNERFTNMLKNKQPTPVNIRASMQQQQQLASARNRRLAQQME 60

Query: 575 NRPSVQAALKLKQSLKQRLGKSNIQXXXXXXXXXXXXXXXXXXXXXXXQXXXXXXXXXXX 754
           NRPSVQAALKLKQSLKQRLGKSNIQ                       Q           
Sbjct: 61  NRPSVQAALKLKQSLKQRLGKSNIQARLGRPIGALARGAIGGRGLPIIQRGLPRGGLRGG 120

Query: 755 XXXXXXXXXXMSLRGQNLLRGGRAVAP 835
                     MSLRGQNLLRGGRAVAP
Sbjct: 121 RATRTLLRGGMSLRGQNLLRGGRAVAP 147



 Score = 79.0 bits (193), Expect = 8e-15
 Identities = 38/39 (97%), Positives = 38/39 (97%)
 Frame = +3

Query: 1017 RPVLTKEQLDNQLDAYMSKTKGHLDAELDAYMAQTDP*T 1133
            RPVLTKEQLDNQLDAYMSKTKGHLDAELDAYMAQTDP T
Sbjct: 208  RPVLTKEQLDNQLDAYMSKTKGHLDAELDAYMAQTDPET 246


>ref|NP_001193541.1| chromatin target of PRMT1 protein isoform 2 [Homo sapiens].
          Length = 249

 Score =  127 bits (318), Expect = 3e-29
 Identities = 81/148 (54%), Positives = 81/148 (54%), Gaps = 1/148 (0%)
 Frame = +2

Query: 395 MAAQSAPKVVLKSTTKMSLNERFTNMLKNKQPMPVNIXXXXXXXXXXXXXXXXXXXXXME 574
           MAAQSAPKVVLKSTTKMSLNERFTNMLKNKQP PVNI                     ME
Sbjct: 1   MAAQSAPKVVLKSTTKMSLNERFTNMLKNKQPTPVNIRASMQQQQQLASARNRRLAQQME 60

Query: 575 NRPSVQAALKLKQ-SLKQRLGKSNIQXXXXXXXXXXXXXXXXXXXXXXXQXXXXXXXXXX 751
           NRPSVQAALKLKQ SLKQRLGKSNIQ                       Q          
Sbjct: 61  NRPSVQAALKLKQKSLKQRLGKSNIQARLGRPIGALARGAIGGRGLPIIQRGLPRGGLRG 120

Query: 752 XXXXXXXXXXXMSLRGQNLLRGGRAVAP 835
                      MSLRGQNLLRGGRAVAP
Sbjct: 121 GRATRTLLRGGMSLRGQNLLRGGRAVAP 148



 Score = 79.0 bits (193), Expect = 8e-15
 Identities = 38/39 (97%), Positives = 38/39 (97%)
 Frame = +3

Query: 1017 RPVLTKEQLDNQLDAYMSKTKGHLDAELDAYMAQTDP*T 1133
            RPVLTKEQLDNQLDAYMSKTKGHLDAELDAYMAQTDP T
Sbjct: 209  RPVLTKEQLDNQLDAYMSKTKGHLDAELDAYMAQTDPET 247


  Database: RefSeq49_HP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,297,164
  Number of sequences in database:  32,964
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 38,670,808
Number of extensions: 1006754
Number of successful extensions: 3713
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 3701
Number of HSP's successfully gapped: 4
Length of query: 382
Length of database: 18,297,164
Length adjustment: 104
Effective length of query: 278
Effective length of database: 14,868,908
Effective search space: 4133556424
Effective search space used: 4133556424
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-000719
         (1148 letters)

Database: RefSeq49_MP.fasta 
           30,036 sequences; 15,617,559 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_075704.2| Friend of PRMT1 protein [Mus musculus].               83   4e-16

>ref|NP_075704.2| Friend of PRMT1 protein [Mus musculus].
          Length = 224

 Score = 83.2 bits (204), Expect = 4e-16
 Identities = 57/123 (46%), Positives = 57/123 (46%), Gaps = 1/123 (0%)
 Frame = +2

Query: 470 MLKNKQPMPVNIXXXXXXXXXXXXXXXXXXXXXMENRPSVQAALKLKQ-SLKQRLGKSNI 646
           MLKNKQPMPVNI                     MENRPSVQAALKLKQ SLKQRLGKSNI
Sbjct: 1   MLKNKQPMPVNIRASMQQQQQLASARNRRLAQQMENRPSVQAALKLKQKSLKQRLGKSNI 60

Query: 647 QXXXXXXXXXXXXXXXXXXXXXXXQXXXXXXXXXXXXXXXXXXXXXMSLRGQNLLRGGRA 826
           Q                       Q                     MSLRGQNLLRGGRA
Sbjct: 61  QARLGRPIGALARGAIGGRGLPIIQRGLPRGGLRGGRATRTLLRGGMSLRGQNLLRGGRA 120

Query: 827 VAP 835
           VAP
Sbjct: 121 VAP 123



 Score = 79.0 bits (193), Expect = 7e-15
 Identities = 38/39 (97%), Positives = 38/39 (97%)
 Frame = +3

Query: 1017 RPVLTKEQLDNQLDAYMSKTKGHLDAELDAYMAQTDP*T 1133
            RPVLTKEQLDNQLDAYMSKTKGHLDAELDAYMAQTDP T
Sbjct: 184  RPVLTKEQLDNQLDAYMSKTKGHLDAELDAYMAQTDPET 222


  Database: RefSeq49_MP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 15,617,559
  Number of sequences in database:  30,036
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 32,618,389
Number of extensions: 835607
Number of successful extensions: 2941
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 2934
Number of HSP's successfully gapped: 2
Length of query: 382
Length of database: 15,617,559
Length adjustment: 103
Effective length of query: 279
Effective length of database: 12,523,851
Effective search space: 3494154429
Effective search space used: 3494154429
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-000719
         (1148 letters)

Database: RefSeq49_SP.fasta 
           24,897 sequences; 11,343,932 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001230197.1| chromatin target of PRMT1 protein [Sus scrof...   129   3e-30

>ref|NP_001230197.1| chromatin target of PRMT1 protein [Sus scrofa].
          Length = 249

 Score =  129 bits (324), Expect = 3e-30
 Identities = 82/148 (55%), Positives = 82/148 (55%), Gaps = 1/148 (0%)
 Frame = +2

Query: 395 MAAQSAPKVVLKSTTKMSLNERFTNMLKNKQPMPVNIXXXXXXXXXXXXXXXXXXXXXME 574
           MAAQSAPKVVLKSTTKMSLNERFTNMLKNKQPMPVNI                     ME
Sbjct: 1   MAAQSAPKVVLKSTTKMSLNERFTNMLKNKQPMPVNIRASMQQQQQLASARNRRLAQQME 60

Query: 575 NRPSVQAALKLKQ-SLKQRLGKSNIQXXXXXXXXXXXXXXXXXXXXXXXQXXXXXXXXXX 751
           NRPSVQAALKLKQ SLKQRLGKSNIQ                       Q          
Sbjct: 61  NRPSVQAALKLKQKSLKQRLGKSNIQARLGRPIGALARGAIGGRGLPIIQRGLPRGGLRG 120

Query: 752 XXXXXXXXXXXMSLRGQNLLRGGRAVAP 835
                      MSLRGQNLLRGGRAVAP
Sbjct: 121 GRATRTLLRGGMSLRGQNLLRGGRAVAP 148



 Score = 79.0 bits (193), Expect = 5e-15
 Identities = 38/39 (97%), Positives = 38/39 (97%)
 Frame = +3

Query: 1017 RPVLTKEQLDNQLDAYMSKTKGHLDAELDAYMAQTDP*T 1133
            RPVLTKEQLDNQLDAYMSKTKGHLDAELDAYMAQTDP T
Sbjct: 209  RPVLTKEQLDNQLDAYMSKTKGHLDAELDAYMAQTDPET 247


  Database: RefSeq49_SP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 11,343,932
  Number of sequences in database:  24,897
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 25,098,403
Number of extensions: 752026
Number of successful extensions: 2412
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 2404
Number of HSP's successfully gapped: 2
Length of query: 382
Length of database: 11,343,932
Length adjustment: 101
Effective length of query: 281
Effective length of database: 8,829,335
Effective search space: 2481043135
Effective search space used: 2481043135
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)

BLASTN 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-000719
         (1148 letters)

Database: Sscrofa_10.2.fasta 
           4582 sequences; 2,808,509,378 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Sscrofa_Chr04                                                         529   e-147
gb|GL894908.2| Sus scrofa unplaced genomic scaffold ChrUScaf2792       92   8e-16
Sscrofa_ChrX                                                           92   8e-16
Sscrofa_Chr16                                                          92   8e-16
Sscrofa_Chr15                                                          92   8e-16
Sscrofa_Chr14                                                          92   8e-16
Sscrofa_Chr13                                                          92   8e-16
Sscrofa_Chr11                                                          92   8e-16
Sscrofa_Chr10                                                          92   8e-16
Sscrofa_Chr09                                                          92   8e-16

>Sscrofa_Chr04 
||          Length = 143465943

 Score =  529 bits (267), Expect = e-147
 Identities = 270/271 (99%)
 Strand = Plus / Minus

                                                                             
Query: 107       ttttgttttggagagcgagcgggagttggcggcagcggctgtggtgaaaggcaggaaagg 166
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 104898754 ttttgttttggagagcgagcgggagttggcggcagcggctgtggtgaaaggcaggaaagg 104898695

                                                                             
Query: 167       gcacgccgggcgagcaggcgaaccggccgaccggacagccacccagcagcaacgaactaa 226
                 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 104898694 gcacgccgggcgagcaggcgaaccggccgaccggacagccacccagcatcaacgaactaa 104898635

                                                                             
Query: 227       cctagcattctaccgtttaacacatacaaccaaccgcccaccaagttaatccgagcccct 286
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 104898634 cctagcattctaccgtttaacacatacaaccaaccgcccaccaagttaatccgagcccct 104898575

                                                                             
Query: 287       ccaccgtcaactcaggttcggccggcccccggccagcctgtcgcagccgtggtggcaacc 346
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 104898574 ccaccgtcaactcaggttcggccggcccccggccagcctgtcgcagccgtggtggcaacc 104898515

                                                
Query: 347       ccgggaggagcactggcgtccgtttccttcg 377
                 |||||||||||||||||||||||||||||||
Sbjct: 104898514 ccgggaggagcactggcgtccgtttccttcg 104898484



 Score =  377 bits (190), Expect = e-102
 Identities = 190/190 (100%)
 Strand = Plus / Minus

                                                                             
Query: 612       agagcttaaagcagcgcctgggtaagagtaacatccaggcacggttaggccgacccatag 671
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 104893276 agagcttaaagcagcgcctgggtaagagtaacatccaggcacggttaggccgacccatag 104893217

                                                                             
Query: 672       gggccctggccaggggagcaatcggaggacgaggcctgcccattatccagagaggcttgc 731
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 104893216 gggccctggccaggggagcaatcggaggacgaggcctgcccattatccagagaggcttgc 104893157

                                                                             
Query: 732       ccagaggaggactacgtgggggacgtgccacaagaaccctacttaggggcgggatgtcgc 791
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 104893156 ccagaggaggactacgtgggggacgtgccacaagaaccctacttaggggcgggatgtcgc 104893097

                           
Query: 792       tccgaggtca 801
                 ||||||||||
Sbjct: 104893096 tccgaggtca 104893087



 Score =  331 bits (167), Expect = 5e-88
 Identities = 204/215 (94%), Gaps = 1/215 (0%)
 Strand = Plus / Minus

                                                                             
Query: 934       aggtcggggtatgataggccggggaaagagggggctttggaggccgaggccgtggacgtg 993
                 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 104890470 aggtcggggtatgataggccggggaa-gagggggctttggaggccgaggccgtggacgtg 104890412

                                                                             
Query: 994       gacaagggaaaggtgcccttgctcgccctgtactgaccaaggagcagctggacaaccaat 1053
                 ||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 104890411 gacgagggagaggtgcccttgctcgccctgtactgaccaaggagcagctggacaaccaat 104890352

                                                                             
Query: 1054      tggatgcatacatgtccaaaactaaaggacacttggatgctgaattggatgcctacatgg 1113
                 |||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 104890351 tggatgcatacatgtcgaaaactaaaggacacttggatgctgagttggatgcctacatgg 104890292

                                                    
Query: 1114      cccaaacagatccttgaaccaagggttgaagcctg 1148
                 | || |||||||||  |||||| | ||||||||||
Sbjct: 104890291 cacagacagatcctgaaaccaatgattgaagcctg 104890257



 Score =  307 bits (155), Expect = 7e-81
 Identities = 155/155 (100%)
 Strand = Plus / Minus

                                                                             
Query: 459       gctttactaatatgctgaagaacaaacaaccgatgccagtgaatattcgggcttcgatgc 518
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 104895917 gctttactaatatgctgaagaacaaacaaccgatgccagtgaatattcgggcttcgatgc 104895858

                                                                             
Query: 519       agcaacaacagcagctagccagtgccagaaacagaagactggcccagcagatggagaata 578
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 104895857 agcaacaacagcagctagccagtgccagaaacagaagactggcccagcagatggagaata 104895798

                                                    
Query: 579       gaccctctgtccaggcagcattaaaacttaagcag 613
                 |||||||||||||||||||||||||||||||||||
Sbjct: 104895797 gaccctctgtccaggcagcattaaaacttaagcag 104895763



 Score =  283 bits (143), Expect = 1e-73
 Identities = 146/147 (99%)
 Strand = Plus / Minus

                                                                             
Query: 791       ctccgaggtcaaaacctgctccgaggtggacgagccgtagctccccgaatgggcttaaga 850
                 |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 104892292 ctccaaggtcaaaacctgctccgaggtggacgagccgtagctccccgaatgggcttaaga 104892233

                                                                             
Query: 851       agaggtggtgttcgaggtcgtggaggtcctgggagagggggcctagggcgtggagctatg 910
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 104892232 agaggtggtgttcgaggtcgtggaggtcctgggagagggggcctagggcgtggagctatg 104892173

                                            
Query: 911       ggtcgtggcggaatcggtggtagaggt 937
                 |||||||||||||||||||||||||||
Sbjct: 104892172 ggtcgtggcggaatcggtggtagaggt 104892146



 Score =  165 bits (83), Expect = 7e-38
 Identities = 83/83 (100%)
 Strand = Plus / Minus

                                                                             
Query: 377       gattctcgggatttgaagatggctgcacagtcagcaccgaaagttgtgctaaaaagcacc 436
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 104897315 gattctcgggatttgaagatggctgcacagtcagcaccgaaagttgtgctaaaaagcacc 104897256

                                        
Query: 437       accaagatgtctctaaatgagcg 459
                 |||||||||||||||||||||||
Sbjct: 104897255 accaagatgtctctaaatgagcg 104897233



 Score = 91.7 bits (46), Expect = 8e-16
 Identities = 46/46 (100%)
 Strand = Plus / Plus

                                                              
Query: 1        ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38607610 ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 38607655



 Score = 91.7 bits (46), Expect = 8e-16
 Identities = 46/46 (100%)
 Strand = Plus / Minus

                                                              
Query: 1        ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45506585 ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 45506540



 Score = 91.7 bits (46), Expect = 8e-16
 Identities = 46/46 (100%)
 Strand = Plus / Minus

                                                               
Query: 1         ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                 ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139592774 ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 139592729



 Score = 83.8 bits (42), Expect = 2e-13
 Identities = 45/46 (97%)
 Strand = Plus / Minus

                                                              
Query: 1        ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                |||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 44256131 ggacttcccgtgtggctcacaacataactacttggcgttgcttcta 44256086



 Score = 83.8 bits (42), Expect = 2e-13
 Identities = 45/46 (97%)
 Strand = Plus / Plus

                                                              
Query: 1        ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                ||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 58343883 ggacttcccgtgtggctcacaacataactactctgcgttgcttcta 58343928



 Score = 83.8 bits (42), Expect = 2e-13
 Identities = 42/42 (100%)
 Strand = Plus / Plus

                                                          
Query: 5        ttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64748162 ttcccgtgtggctcacaacataactactcggcgttgcttcta 64748203



 Score = 83.8 bits (42), Expect = 2e-13
 Identities = 45/46 (97%)
 Strand = Plus / Plus

                                                               
Query: 1         ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                 |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 116834425 ggacttcctgtgtggctcacaacataactactcggcgttgcttcta 116834470



 Score = 83.8 bits (42), Expect = 2e-13
 Identities = 45/46 (97%)
 Strand = Plus / Minus

                                                               
Query: 1         ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                 |||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 118013114 ggacttcccgtgtggctcacaacatagctactcggcgttgcttcta 118013069



 Score = 75.8 bits (38), Expect = 5e-11
 Identities = 44/46 (95%)
 Strand = Plus / Minus

                                                               
Query: 1         ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                 ||||||||| |||||||||||||||||||||||||| |||||||||
Sbjct: 106984993 ggacttcccatgtggctcacaacataactactcggcattgcttcta 106984948



 Score = 73.8 bits (37), Expect = 2e-10
 Identities = 43/45 (95%)
 Strand = Plus / Plus

                                                             
Query: 1        ggacttcccgtgtggctcacaacataactactcggcgttgcttct 45
                |||||||||||||||||| ||||||||||||| ||||||||||||
Sbjct: 76042502 ggacttcccgtgtggctcgcaacataactacttggcgttgcttct 76042546



 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 43/46 (93%)
 Strand = Plus / Plus

                                                              
Query: 1        ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                ||||||||| ||||||||||||||||||||| ||| ||||||||||
Sbjct: 54911951 ggacttcccatgtggctcacaacataactacccggtgttgcttcta 54911996



 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 34/34 (100%)
 Strand = Plus / Plus

                                                  
Query: 13       tggctcacaacataactactcggcgttgcttcta 46
                ||||||||||||||||||||||||||||||||||
Sbjct: 98407805 tggctcacaacataactactcggcgttgcttcta 98407838



 Score = 65.9 bits (33), Expect = 5e-08
 Identities = 42/45 (93%)
 Strand = Plus / Plus

                                                             
Query: 1        ggacttcccgtgtggctcacaacataactactcggcgttgcttct 45
                ||||||||| | |||||||||||||||||||| ||||||||||||
Sbjct: 20886710 ggacttcccatatggctcacaacataactacttggcgttgcttct 20886754



 Score = 65.9 bits (33), Expect = 5e-08
 Identities = 42/45 (93%)
 Strand = Plus / Plus

                                                             
Query: 2        gacttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                |||||||  |||||||||||||||||||||||||| |||||||||
Sbjct: 30970506 gacttcctctgtggctcacaacataactactcggcattgcttcta 30970550



 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 35/36 (97%)
 Strand = Plus / Plus

                                                    
Query: 11       tgtggctcacaacataactactcggcgttgcttcta 46
                |||||||||| |||||||||||||||||||||||||
Sbjct: 74407295 tgtggctcacgacataactactcggcgttgcttcta 74407330



 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 41/44 (93%)
 Strand = Plus / Plus

                                                             
Query: 3         acttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                 |||||||||||||||||||||||||| |||| | ||||||||||
Sbjct: 118756348 acttcccgtgtggctcacaacataaccactcagtgttgcttcta 118756391



 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 42/46 (91%)
 Strand = Plus / Plus

                                                              
Query: 1        ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                ||||||||| |||||||||| | ||||||||||||| |||||||||
Sbjct: 44387994 ggacttcccttgtggctcactatataactactcggcattgcttcta 44388039



 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 42/46 (91%)
 Strand = Plus / Plus

                                                              
Query: 1        ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                |||||||| ||||||||| |||||||||||||| || |||||||||
Sbjct: 67234811 ggacttcctgtgtggctcgcaacataactactcagcattgcttcta 67234856



 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                              
Query: 1        ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                ||||||| | |||||||||||||||||||||| || ||||||||||
Sbjct: 89040020 ggacttctcatgtggctcacaacataactacttggtgttgcttcta 89039975


>gb|GL894908.2| Sus scrofa unplaced genomic scaffold ChrUScaf2792
          Length = 52973

 Score = 91.7 bits (46), Expect = 8e-16
 Identities = 46/46 (100%)
 Strand = Plus / Plus

                                                           
Query: 1     ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 46
             ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 41963 ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 42008


>Sscrofa_ChrX 
||          Length = 144288218

 Score = 91.7 bits (46), Expect = 8e-16
 Identities = 46/46 (100%)
 Strand = Plus / Minus

                                                               
Query: 1         ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                 ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132052966 ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 132052921



 Score = 83.8 bits (42), Expect = 2e-13
 Identities = 45/46 (97%)
 Strand = Plus / Plus

                                                              
Query: 1        ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                |||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 85726206 ggacttcccgtgtggctcacaacataactactcggcattgcttcta 85726251



 Score = 81.8 bits (41), Expect = 8e-13
 Identities = 44/45 (97%)
 Strand = Plus / Minus

                                                              
Query: 1         ggacttcccgtgtggctcacaacataactactcggcgttgcttct 45
                 |||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 131952177 ggacttcccgtgtggctcacaacataactactcggcattgcttct 131952133



 Score = 75.8 bits (38), Expect = 5e-11
 Identities = 44/46 (95%)
 Strand = Plus / Plus

                                                              
Query: 1        ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                ||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 76247293 ggacttcccctgtggctcacaacataactactcagcgttgcttcta 76247338



 Score = 75.8 bits (38), Expect = 5e-11
 Identities = 44/46 (95%)
 Strand = Plus / Plus

                                                              
Query: 1        ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                |||||||||||||||| |||||||||||||||| ||||||||||||
Sbjct: 78250124 ggacttcccgtgtggcccacaacataactactcagcgttgcttcta 78250169



 Score = 71.9 bits (36), Expect = 7e-10
 Identities = 39/40 (97%)
 Strand = Plus / Minus

                                                        
Query: 7        cccgtgtggctcacaacataactactcggcgttgcttcta 46
                |||||||||||||||||||||||||| |||||||||||||
Sbjct: 68296573 cccgtgtggctcacaacataactacttggcgttgcttcta 68296534



 Score = 71.9 bits (36), Expect = 7e-10
 Identities = 36/36 (100%)
 Strand = Plus / Plus

                                                    
Query: 1        ggacttcccgtgtggctcacaacataactactcggc 36
                ||||||||||||||||||||||||||||||||||||
Sbjct: 82395400 ggacttcccgtgtggctcacaacataactactcggc 82395435



 Score = 69.9 bits (35), Expect = 3e-09
 Identities = 45/47 (95%), Gaps = 1/47 (2%)
 Strand = Plus / Minus

                                                                
Query: 1         ggacttcccgtgtggctca-caacataactactcggcgttgcttcta 46
                 ||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 124928939 ggacttcccgtgtggctcaacaacagaactactcggcgttgcttcta 124928893



 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 43/46 (93%)
 Strand = Plus / Minus

                                                              
Query: 1        ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                |||||| || ||||||||||||||||||| ||||||||||||||||
Sbjct: 27167419 ggactttccatgtggctcacaacataacttctcggcgttgcttcta 27167374



 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 43/46 (93%)
 Strand = Plus / Plus

                                                              
Query: 1        ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                |||||| || ||||||||||||||||||| ||||||||||||||||
Sbjct: 27369761 ggactttccatgtggctcacaacataacttctcggcgttgcttcta 27369806



 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 43/46 (93%)
 Strand = Plus / Plus

                                                              
Query: 1        ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                ||||||||| ||||||||||| ||||||||||||| ||||||||||
Sbjct: 51970668 ggacttcccctgtggctcacagcataactactcggtgttgcttcta 51970713



 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 40/42 (95%)
 Strand = Plus / Minus

                                                          
Query: 5        ttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                ||||| |||||||||||||||||||||||||| |||||||||
Sbjct: 74440651 ttcccttgtggctcacaacataactactcggcattgcttcta 74440610



 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 43/46 (93%)
 Strand = Plus / Plus

                                                              
Query: 1        ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                ||||||||| | |||||||||||||||||||||||| |||||||||
Sbjct: 86084482 ggacttcccatatggctcacaacataactactcggcattgcttcta 86084527



 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 43/46 (93%)
 Strand = Plus / Minus

                                                               
Query: 1         ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                 ||||||||||||||||||||||||||| |||| ||| |||||||||
Sbjct: 109345881 ggacttcccgtgtggctcacaacataagtacttggcattgcttcta 109345836



 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 32/32 (100%)
 Strand = Plus / Plus

                                                
Query: 1        ggacttcccgtgtggctcacaacataactact 32
                ||||||||||||||||||||||||||||||||
Sbjct: 53903517 ggacttcccgtgtggctcacaacataactact 53903548



 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 41/44 (93%)
 Strand = Plus / Plus

                                                            
Query: 1        ggacttcccgtgtggctcacaacataactactcggcgttgcttc 44
                ||||||||| ||||||||||| |||||||||||||| |||||||
Sbjct: 54186682 ggacttcccatgtggctcacagcataactactcggcattgcttc 54186725



 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 41/44 (93%)
 Strand = Plus / Plus

                                                            
Query: 1        ggacttcccgtgtggctcacaacataactactcggcgttgcttc 44
                ||||||||| ||||||||||| |||||||||||||| |||||||
Sbjct: 54522360 ggacttcccatgtggctcacagcataactactcggcattgcttc 54522403



 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 35/36 (97%)
 Strand = Plus / Minus

                                                     
Query: 1         ggacttcccgtgtggctcacaacataactactcggc 36
                 ||||||||| ||||||||||||||||||||||||||
Sbjct: 101245579 ggacttcccatgtggctcacaacataactactcggc 101245544



 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 35/36 (97%)
 Strand = Plus / Plus

                                                     
Query: 1         ggacttcccgtgtggctcacaacataactactcggc 36
                 ||||||||| ||||||||||||||||||||||||||
Sbjct: 120748137 ggacttcccatgtggctcacaacataactactcggc 120748172



 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                              
Query: 1        ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                |||||||| ||||||||| || |||| |||||||||||||||||||
Sbjct: 16039220 ggacttcctgtgtggctcgcagcatatctactcggcgttgcttcta 16039175



 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                              
Query: 1        ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                ||||||||| ||||||||||| |||||||| | |||||||||||||
Sbjct: 17555701 ggacttcccatgtggctcacagcataactatttggcgttgcttcta 17555656



 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 42/46 (91%)
 Strand = Plus / Plus

                                                              
Query: 1        ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                |||||||| |||||||||||| ||||||||||| || |||||||||
Sbjct: 28524787 ggacttcctgtgtggctcacagcataactactcagcattgcttcta 28524832



 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                              
Query: 1        ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                |||||||| |||||||||||| ||||||||||||| ||| ||||||
Sbjct: 31857507 ggacttcctgtgtggctcacagcataactactcggtgtttcttcta 31857462



 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                              
Query: 1        ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                ||||||||||| |||||||||| |||||||||| || |||||||||
Sbjct: 42278225 ggacttcccgtttggctcacaaaataactactcagctttgcttcta 42278180



 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 42/46 (91%)
 Strand = Plus / Plus

                                                              
Query: 1        ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                |||||||| |||||||||||| ||||||||||| || |||||||||
Sbjct: 72784310 ggacttcctgtgtggctcacagcataactactcagcattgcttcta 72784355



 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 42/46 (91%)
 Strand = Plus / Plus

                                                              
Query: 1        ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                |||||||| ||||||||||||| |||||||||| || |||||||||
Sbjct: 77328089 ggacttcctgtgtggctcacaaaataactactcagcattgcttcta 77328134



 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 42/46 (91%)
 Strand = Plus / Plus

                                                              
Query: 1        ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                |||||||| ||||||||||||| |||||||||| || |||||||||
Sbjct: 77488954 ggacttcctgtgtggctcacaaaataactactcagcattgcttcta 77488999


>Sscrofa_Chr16 
||          Length = 86898991

 Score = 91.7 bits (46), Expect = 8e-16
 Identities = 46/46 (100%)
 Strand = Plus / Plus

                                                              
Query: 1        ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 54725495 ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 54725540



 Score = 91.7 bits (46), Expect = 8e-16
 Identities = 46/46 (100%)
 Strand = Plus / Minus

                                                              
Query: 1        ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 54881690 ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 54881645



 Score = 83.8 bits (42), Expect = 2e-13
 Identities = 45/46 (97%)
 Strand = Plus / Minus

                                                              
Query: 1        ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                ||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 39484194 ggacttcccgtgtggctcacaacataactactcggtgttgcttcta 39484149



 Score = 83.8 bits (42), Expect = 2e-13
 Identities = 45/46 (97%)
 Strand = Plus / Minus

                                                              
Query: 1        ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                ||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 39605699 ggacttcccgtgtggctcacaacataactactcggtgttgcttcta 39605654



 Score = 79.8 bits (40), Expect = 3e-12
 Identities = 43/44 (97%)
 Strand = Plus / Plus

                                                            
Query: 3        acttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                |||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 47376732 acttcccgtgtggctcacaacataactattcggcgttgcttcta 47376775



 Score = 79.8 bits (40), Expect = 3e-12
 Identities = 43/44 (97%)
 Strand = Plus / Plus

                                                            
Query: 3        acttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                |||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 47447363 acttcccgtgtggctcacaacataactattcggcgttgcttcta 47447406



 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 43/46 (93%)
 Strand = Plus / Plus

                                                              
Query: 1        ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                ||||||||||||||||||||| ||||||||| |||| |||||||||
Sbjct: 64179293 ggacttcccgtgtggctcacagcataactacccggcattgcttcta 64179338



 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 43/46 (93%)
 Strand = Plus / Minus

                                                              
Query: 1        ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                ||||||||||||||||||||| |||||||||| || ||||||||||
Sbjct: 64673118 ggacttcccgtgtggctcacagcataactacttggtgttgcttcta 64673073



 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 43/46 (93%)
 Strand = Plus / Minus

                                                              
Query: 1        ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                ||||||||||||||||||||||| ||||||||| || |||||||||
Sbjct: 77231201 ggacttcccgtgtggctcacaacgtaactactcagcattgcttcta 77231156



 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 43/46 (93%)
 Strand = Plus / Plus

                                                              
Query: 1        ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                ||||||||| |||||||||||||||||||||| |||||| ||||||
Sbjct: 86801232 ggacttcccatgtggctcacaacataactacttggcgttacttcta 86801277



 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                        
Query: 1        ggacttcccgtgtggctcacaacataactactcggcgttg 40
                ||||||||||||||||||||| ||||||||||||| ||||
Sbjct: 34842033 ggacttcccgtgtggctcacagcataactactcggtgttg 34841994



 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                        
Query: 1        ggacttcccgtgtggctcacaacataactactcggcgttg 40
                ||||||||||||||||||||| ||||||||||||| ||||
Sbjct: 34904235 ggacttcccgtgtggctcacagcataactactcggtgttg 34904196



 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 32/32 (100%)
 Strand = Plus / Minus

                                                
Query: 1        ggacttcccgtgtggctcacaacataactact 32
                ||||||||||||||||||||||||||||||||
Sbjct: 44921736 ggacttcccgtgtggctcacaacataactact 44921705



 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                              
Query: 1        ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                ||||||||||||  ||||||  ||||||||||||||||||||||||
Sbjct: 46897602 ggacttcccgtgcagctcactgcataactactcggcgttgcttcta 46897557


>Sscrofa_Chr15 
||          Length = 157681621

 Score = 91.7 bits (46), Expect = 8e-16
 Identities = 46/46 (100%)
 Strand = Plus / Plus

                                                              
Query: 1        ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21152675 ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 21152720



 Score = 77.8 bits (39), Expect = 1e-11
 Identities = 42/43 (97%)
 Strand = Plus / Plus

                                                            
Query: 4         cttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                 |||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 124722805 cttcccgtgtggctcacaacataactactcggtgttgcttcta 124722847



 Score = 75.8 bits (38), Expect = 5e-11
 Identities = 44/46 (95%)
 Strand = Plus / Minus

                                                              
Query: 1        ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                ||||||||| |||||||||||||||||||||||||| |||||||||
Sbjct: 14057530 ggacttcccatgtggctcacaacataactactcggcattgcttcta 14057485



 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 43/46 (93%)
 Strand = Plus / Plus

                                                              
Query: 1        ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                |||||||| |||||||||||||||||||||||| || |||||||||
Sbjct: 57182723 ggacttcctgtgtggctcacaacataactactcagcattgcttcta 57182768



 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 43/46 (93%)
 Strand = Plus / Plus

                                                              
Query: 1        ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                |||||||||||||||||||||||||||||||| |||| || |||||
Sbjct: 97941066 ggacttcccgtgtggctcacaacataactacttggcgctgtttcta 97941111



 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 35/36 (97%)
 Strand = Plus / Plus

                                                    
Query: 1        ggacttcccgtgtggctcacaacataactactcggc 36
                ||||||||| ||||||||||||||||||||||||||
Sbjct: 18733722 ggacttcccatgtggctcacaacataactactcggc 18733757



 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 41/44 (93%)
 Strand = Plus / Plus

                                                            
Query: 3        acttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                |||||| |||||||||||||||||||||||| | ||||||||||
Sbjct: 19476644 acttcctgtgtggctcacaacataactactccgagttgcttcta 19476687



 Score = 61.9 bits (31), Expect = 7e-07
 Identities = 40/43 (93%)
 Strand = Plus / Plus

                                                          
Query: 1       ggacttcccgtgtggctcacaacataactactcggcgttgctt 43
               ||||||||||||||||||||| |||||||||| || |||||||
Sbjct: 4213101 ggacttcccgtgtggctcacagcataactacttggtgttgctt 4213143



 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                          
Query: 5        ttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                ||||| ||||||||||||||||||||||| | ||||||||||
Sbjct: 16692329 ttcccatgtggctcacaacataactactcagagttgcttcta 16692288



 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 43/46 (93%), Gaps = 1/46 (2%)
 Strand = Plus / Plus

                                                              
Query: 1        ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                |||||||| |||||||| ||||| ||||||||||||||||||||||
Sbjct: 52977305 ggacttcctgtgtggcttacaac-taactactcggcgttgcttcta 52977349



 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 43/46 (93%), Gaps = 1/46 (2%)
 Strand = Plus / Minus

                                                               
Query: 2         gacttcccgtgtggctcacaaca-taactactcggcgttgcttcta 46
                 |||||| |||||||||||||||| |||||||||||| |||||||||
Sbjct: 109785319 gacttctcgtgtggctcacaacattaactactcggcattgcttcta 109785274



 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 42/46 (91%)
 Strand = Plus / Plus

                                                               
Query: 1         ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                 |||| |||| ||||||||||||||||||||||| || |||||||||
Sbjct: 110829450 ggacctcccttgtggctcacaacataactactcagctttgcttcta 110829495


>Sscrofa_Chr14 
||          Length = 153851969

 Score = 91.7 bits (46), Expect = 8e-16
 Identities = 46/46 (100%)
 Strand = Plus / Minus

                                                              
Query: 1        ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73520486 ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 73520441



 Score = 83.8 bits (42), Expect = 2e-13
 Identities = 45/46 (97%)
 Strand = Plus / Minus

                                                              
Query: 1        ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                ||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 59866027 ggacttcccgtgtggctcacaacataactactcggtgttgcttcta 59865982



 Score = 83.8 bits (42), Expect = 2e-13
 Identities = 45/46 (97%)
 Strand = Plus / Plus

                                                              
Query: 1        ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                ||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 72480251 ggacttcccgtgtggctcacaacataactactcggtgttgcttcta 72480296



 Score = 77.8 bits (39), Expect = 1e-11
 Identities = 42/43 (97%)
 Strand = Plus / Plus

                                                           
Query: 1        ggacttcccgtgtggctcacaacataactactcggcgttgctt 43
                |||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 71758555 ggacttcccgtgtggctcacaacataactacttggcgttgctt 71758597



 Score = 77.8 bits (39), Expect = 1e-11
 Identities = 42/43 (97%)
 Strand = Plus / Minus

                                                            
Query: 4         cttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                 ||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 123029615 cttcccgtgtggctcacaacataactactcgacgttgcttcta 123029573



 Score = 75.8 bits (38), Expect = 5e-11
 Identities = 44/46 (95%)
 Strand = Plus / Plus

                                                              
Query: 1        ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                ||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 26908049 ggacttcccgtgtggctcacagcataactactcagcgttgcttcta 26908094



 Score = 75.8 bits (38), Expect = 5e-11
 Identities = 44/46 (95%)
 Strand = Plus / Minus

                                                              
Query: 1        ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                ||||||||| ||||||||||||||||||||||||| ||||||||||
Sbjct: 65002513 ggacttcccatgtggctcacaacataactactcggtgttgcttcta 65002468



 Score = 69.9 bits (35), Expect = 3e-09
 Identities = 41/43 (95%)
 Strand = Plus / Minus

                                                           
Query: 1        ggacttcccgtgtggctcacaacataactactcggcgttgctt 43
                ||||||||| ||||||||||||||||||| |||||||||||||
Sbjct: 65637025 ggacttcccatgtggctcacaacataactgctcggcgttgctt 65636983



 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 40/42 (95%)
 Strand = Plus / Plus

                                                          
Query: 2        gacttcccgtgtggctcacaacataactactcggcgttgctt 43
                |||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 28960046 gacttcccatgtggctcacaacataactactcggcattgctt 28960087



 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 43/46 (93%)
 Strand = Plus / Plus

                                                              
Query: 1        ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                |||||||| ||| ||||||||||||||||||||||| |||||||||
Sbjct: 62391659 ggacttcctgtgcggctcacaacataactactcggctttgcttcta 62391704



 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 43/46 (93%)
 Strand = Plus / Minus

                                                              
Query: 1        ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                ||||||||| ||||||||||||| ||||||||||| ||||||||||
Sbjct: 75539538 ggacttcccatgtggctcacaacttaactactcggtgttgcttcta 75539493



 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 43/46 (93%)
 Strand = Plus / Plus

                                                               
Query: 1         ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                 ||||||||| |||||||||||| ||||||||||||||||| |||||
Sbjct: 101573708 ggacttcccatgtggctcacaatataactactcggcgttgtttcta 101573753



 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 43/46 (93%)
 Strand = Plus / Minus

                                                               
Query: 1         ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                 ||||||||| |||||||||||| |||||||||| ||||||||||||
Sbjct: 123063244 ggacttcccatgtggctcacaatataactactcagcgttgcttcta 123063199



 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 43/46 (93%)
 Strand = Plus / Minus

                                                               
Query: 1         ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                 ||||||||| |||||||||||| |||||||||| ||||||||||||
Sbjct: 123063826 ggacttcccatgtggctcacaatataactactcagcgttgcttcta 123063781



 Score = 65.9 bits (33), Expect = 5e-08
 Identities = 42/45 (93%)
 Strand = Plus / Plus

                                                              
Query: 1         ggacttcccgtgtggctcacaacataactactcggcgttgcttct 45
                 ||||||||||||||||||||||| ||||| ||||| |||||||||
Sbjct: 140345639 ggacttcccgtgtggctcacaacctaactcctcggtgttgcttct 140345683



 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                              
Query: 1        ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                |||||||||||||||||||||| ||| ||||| || ||||||||||
Sbjct: 14261034 ggacttcccgtgtggctcacaatatatctacttggtgttgcttcta 14260989



 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                              
Query: 1        ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                |||||||| ||||||| ||||| ||||||||||||| |||||||||
Sbjct: 39891823 ggacttcctgtgtggcgcacaatataactactcggcattgcttcta 39891778



 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                              
Query: 1        ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                |||||||| ||||||||||||||||| ||||  |||||||||||||
Sbjct: 77910091 ggacttcctgtgtggctcacaacatagctacctggcgttgcttcta 77910046



 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 42/46 (91%)
 Strand = Plus / Plus

                                                              
Query: 1        ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                |||||||| |||||||||||| ||||||||||| | ||||||||||
Sbjct: 88890808 ggacttcctgtgtggctcacagcataactactcagtgttgcttcta 88890853



 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 42/46 (91%)
 Strand = Plus / Plus

                                                              
Query: 1        ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                ||||||||| ||||||||| |||||||||||| ||| |||||||||
Sbjct: 89678985 ggacttcccatgtggctcataacataactacttggcattgcttcta 89679030


>Sscrofa_Chr13 
||          Length = 218635234

 Score = 91.7 bits (46), Expect = 8e-16
 Identities = 46/46 (100%)
 Strand = Plus / Minus

                                                               
Query: 1         ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                 ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182202209 ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 182202164



 Score = 89.7 bits (45), Expect = 3e-15
 Identities = 45/45 (100%)
 Strand = Plus / Plus

                                                             
Query: 1        ggacttcccgtgtggctcacaacataactactcggcgttgcttct 45
                |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71334583 ggacttcccgtgtggctcacaacataactactcggcgttgcttct 71334627



 Score = 83.8 bits (42), Expect = 2e-13
 Identities = 45/46 (97%)
 Strand = Plus / Minus

                                                              
Query: 1        ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                |||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 93912366 ggacttcccgtgtggctcacaacataactactcggcattgcttcta 93912321



 Score = 83.8 bits (42), Expect = 2e-13
 Identities = 45/46 (97%)
 Strand = Plus / Minus

                                                              
Query: 1        ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                |||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 94005207 ggacttcccgtgtggctcacaacataactactcggcattgcttcta 94005162



 Score = 83.8 bits (42), Expect = 2e-13
 Identities = 45/46 (97%)
 Strand = Plus / Plus

                                                               
Query: 1         ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                 ||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 137177491 ggactgcccgtgtggctcacaacataactactcggcgttgcttcta 137177536



 Score = 81.8 bits (41), Expect = 8e-13
 Identities = 44/45 (97%)
 Strand = Plus / Plus

                                                              
Query: 1         ggacttcccgtgtggctcacaacataactactcggcgttgcttct 45
                 ||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 193246689 ggacttcccgtgtggctcacaacataactactcggtgttgcttct 193246733



 Score = 75.8 bits (38), Expect = 5e-11
 Identities = 44/46 (95%)
 Strand = Plus / Plus

                                                             
Query: 1       ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 46
               |||||||||||||||||||||||||||||||| ||| |||||||||
Sbjct: 7365163 ggacttcccgtgtggctcacaacataactactgggcattgcttcta 7365208



 Score = 75.8 bits (38), Expect = 5e-11
 Identities = 44/46 (95%)
 Strand = Plus / Minus

                                                             
Query: 1       ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 46
               ||||||||| |||||||||||||||||||||||||| |||||||||
Sbjct: 8656529 ggacttcccatgtggctcacaacataactactcggcattgcttcta 8656484



 Score = 75.8 bits (38), Expect = 5e-11
 Identities = 44/46 (95%)
 Strand = Plus / Minus

                                                             
Query: 1       ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 46
               ||||||||| |||||||||||||||||||||||||| |||||||||
Sbjct: 8854469 ggacttcccatgtggctcacaacataactactcggcattgcttcta 8854424



 Score = 75.8 bits (38), Expect = 5e-11
 Identities = 44/46 (95%)
 Strand = Plus / Minus

                                                              
Query: 1        ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                |||||||| |||||||||||||| ||||||||||||||||||||||
Sbjct: 78597976 ggacttcctgtgtggctcacaacgtaactactcggcgttgcttcta 78597931



 Score = 75.8 bits (38), Expect = 5e-11
 Identities = 44/46 (95%)
 Strand = Plus / Plus

                                                               
Query: 1         ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                 ||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct: 137802054 ggacttcccgtgtggctcacaacataattactcggctttgcttcta 137802099



 Score = 75.8 bits (38), Expect = 5e-11
 Identities = 44/46 (95%)
 Strand = Plus / Minus

                                                               
Query: 1         ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                 |||||||| |||||||||||||||||||||||| ||||||||||||
Sbjct: 150035458 ggacttcctgtgtggctcacaacataactactctgcgttgcttcta 150035413



 Score = 75.8 bits (38), Expect = 5e-11
 Identities = 44/46 (95%)
 Strand = Plus / Minus

                                                               
Query: 1         ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                 |||||||| ||||||||||||||||||||||||||| |||||||||
Sbjct: 167140695 ggacttcctgtgtggctcacaacataactactcggcattgcttcta 167140650



 Score = 75.8 bits (38), Expect = 5e-11
 Identities = 44/46 (95%)
 Strand = Plus / Minus

                                                               
Query: 1         ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                 ||||||||||||||||||||||||||||||||||| |||| |||||
Sbjct: 175616002 ggacttcccgtgtggctcacaacataactactcggtgttgtttcta 175615957



 Score = 71.9 bits (36), Expect = 7e-10
 Identities = 42/44 (95%)
 Strand = Plus / Minus

                                                            
Query: 3        acttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                ||||||| |||||||||||||||||||||| |||||||||||||
Sbjct: 54592346 acttcccatgtggctcacaacataactacttggcgttgcttcta 54592303



 Score = 71.9 bits (36), Expect = 7e-10
 Identities = 36/36 (100%)
 Strand = Plus / Plus

                                                    
Query: 11       tgtggctcacaacataactactcggcgttgcttcta 46
                ||||||||||||||||||||||||||||||||||||
Sbjct: 81976644 tgtggctcacaacataactactcggcgttgcttcta 81976679



 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 43/46 (93%)
 Strand = Plus / Plus

                                                               
Query: 1         ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                 ||||||||| |||||||||||||||||||||| ||| |||||||||
Sbjct: 146833211 ggacttcccatgtggctcacaacataactacttggcattgcttcta 146833256



 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 43/46 (93%)
 Strand = Plus / Plus

                                                               
Query: 1         ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                 ||||||||| |||||||||||||||||||| || ||||||||||||
Sbjct: 159322559 ggacttcccatgtggctcacaacataactaatccgcgttgcttcta 159322604



 Score = 65.9 bits (33), Expect = 5e-08
 Identities = 39/41 (95%)
 Strand = Plus / Minus

                                                          
Query: 6         tcccgtgtggctcacaacataactactcggcgttgcttcta 46
                 |||||||||||||||| ||||||| ||||||||||||||||
Sbjct: 215194633 tcccgtgtggctcacagcataactcctcggcgttgcttcta 215194593



 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 41/44 (93%)
 Strand = Plus / Plus

                                                             
Query: 1         ggacttcccgtgtggctcacaacataactactcggcgttgcttc 44
                 |||||||| |||||||||||||||||||||||| || |||||||
Sbjct: 180267034 ggacttcctgtgtggctcacaacataactactcagcattgcttc 180267077



 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                             
Query: 1       ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 46
               ||||||||| ||||||||||||||||||||| | | ||||||||||
Sbjct: 7635484 ggacttcccatgtggctcacaacataactacccagtgttgcttcta 7635439



 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 42/46 (91%)
 Strand = Plus / Plus

                                                               
Query: 1         ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                 ||||||||| ||||||||||||||||||| || ||| |||||||||
Sbjct: 186699900 ggacttcccatgtggctcacaacataacttcttggcattgcttcta 186699945


>Sscrofa_Chr11 
||          Length = 87690581

 Score = 91.7 bits (46), Expect = 8e-16
 Identities = 46/46 (100%)
 Strand = Plus / Minus

                                                              
Query: 1        ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28718408 ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 28718363



 Score = 87.7 bits (44), Expect = 1e-14
 Identities = 44/44 (100%)
 Strand = Plus / Plus

                                                            
Query: 1        ggacttcccgtgtggctcacaacataactactcggcgttgcttc 44
                ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80877857 ggacttcccgtgtggctcacaacataactactcggcgttgcttc 80877900



 Score = 83.8 bits (42), Expect = 2e-13
 Identities = 45/46 (97%)
 Strand = Plus / Plus

                                                              
Query: 1        ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                ||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 29473192 ggacttcccgtgtggctcacaacataactactcggtgttgcttcta 29473237



 Score = 75.8 bits (38), Expect = 5e-11
 Identities = 44/46 (95%)
 Strand = Plus / Minus

                                                              
Query: 1        ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                ||||||||  ||||||||||||||||||||||||||||||||||||
Sbjct: 11942219 ggacttcctatgtggctcacaacataactactcggcgttgcttcta 11942174



 Score = 75.8 bits (38), Expect = 5e-11
 Identities = 44/46 (95%)
 Strand = Plus / Plus

                                                              
Query: 1        ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                ||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 29806480 ggacttcccatgtggctcacaacataactactctgcgttgcttcta 29806525



 Score = 75.8 bits (38), Expect = 5e-11
 Identities = 44/46 (95%)
 Strand = Plus / Minus

                                                              
Query: 1        ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                ||||||||||||||||||||||||||||||||| | ||||||||||
Sbjct: 35076555 ggacttcccgtgtggctcacaacataactactcagtgttgcttcta 35076510



 Score = 75.8 bits (38), Expect = 5e-11
 Identities = 44/46 (95%)
 Strand = Plus / Plus

                                                              
Query: 1        ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                |||||||||||||||||||||||||||||||||||  |||||||||
Sbjct: 63087705 ggacttcccgtgtggctcacaacataactactcggatttgcttcta 63087750



 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 43/46 (93%)
 Strand = Plus / Plus

                                                              
Query: 1        ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                ||||||||||| |||||||||||||||||||| || ||||||||||
Sbjct: 11067325 ggacttcccgtatggctcacaacataactacttggtgttgcttcta 11067370



 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 35/36 (97%)
 Strand = Plus / Plus

                                                    
Query: 1        ggacttcccgtgtggctcacaacataactactcggc 36
                ||||||||| ||||||||||||||||||||||||||
Sbjct: 14009925 ggacttcccatgtggctcacaacataactactcggc 14009960



 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                              
Query: 1        ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                |||||||||  |||||||||||||||||||||||||  ||||||||
Sbjct: 13310260 ggacttcccacgtggctcacaacataactactcggcactgcttcta 13310215


>Sscrofa_Chr10 
||          Length = 79102373

 Score = 91.7 bits (46), Expect = 8e-16
 Identities = 46/46 (100%)
 Strand = Plus / Plus

                                                              
Query: 1        ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21214344 ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 21214389



 Score = 75.8 bits (38), Expect = 5e-11
 Identities = 45/46 (97%), Gaps = 1/46 (2%)
 Strand = Plus / Plus

                                                              
Query: 2        gacttcccgtgtggctcacaacataac-tactcggcgttgcttcta 46
                ||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 39500315 gacttcccgtgtggctcacaacataacttactcggcgttgcttcta 39500360



 Score = 75.8 bits (38), Expect = 5e-11
 Identities = 44/46 (95%)
 Strand = Plus / Plus

                                                              
Query: 1        ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                |||||||| |||||||||||||||||||||||| ||||||||||||
Sbjct: 42911478 ggacttccagtgtggctcacaacataactactcagcgttgcttcta 42911523



 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 43/46 (93%)
 Strand = Plus / Minus

                                                              
Query: 1        ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                ||||||||| ||||||| ||||||||||||| ||||||||||||||
Sbjct: 55540722 ggacttcccttgtggcttacaacataactacgcggcgttgcttcta 55540677



 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 43/46 (93%)
 Strand = Plus / Minus

                                                              
Query: 1        ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                |||||| ||||| ||||||||||||||||||||||| |||||||||
Sbjct: 64874171 ggacttgccgtggggctcacaacataactactcggcattgcttcta 64874126



 Score = 65.9 bits (33), Expect = 5e-08
 Identities = 42/45 (93%)
 Strand = Plus / Plus

                                                             
Query: 1        ggacttcccgtgtggctcacaacataactactcggcgttgcttct 45
                ||||||||||||||||| |||||| ||||||||||| ||||||||
Sbjct: 77176137 ggacttcccgtgtggctgacaacacaactactcggcattgcttct 77176181



 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 42/46 (91%)
 Strand = Plus / Plus

                                                              
Query: 1        ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                ||||||||| ||||||||||||| |||||||| || ||||||||||
Sbjct: 30460305 ggacttcccatgtggctcacaacgtaactacttggtgttgcttcta 30460350



 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 42/46 (91%)
 Strand = Plus / Plus

                                                              
Query: 1        ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                |||||||| |||||||||||||||||| ||||| || |||||||||
Sbjct: 54878435 ggacttcctgtgtggctcacaacataattactcagcattgcttcta 54878480


>Sscrofa_Chr09 
||          Length = 153670197

 Score = 91.7 bits (46), Expect = 8e-16
 Identities = 46/46 (100%)
 Strand = Plus / Plus

                                                              
Query: 1        ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12494227 ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 12494272



 Score = 91.7 bits (46), Expect = 8e-16
 Identities = 46/46 (100%)
 Strand = Plus / Plus

                                                              
Query: 1        ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55637660 ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 55637705



 Score = 91.7 bits (46), Expect = 8e-16
 Identities = 46/46 (100%)
 Strand = Plus / Minus

                                                              
Query: 1        ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55671977 ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 55671932



 Score = 83.8 bits (42), Expect = 2e-13
 Identities = 45/46 (97%)
 Strand = Plus / Plus

                                                              
Query: 1        ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                |||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 90549899 ggacttcccgtgtggctcacaacataactactcggcattgcttcta 90549944



 Score = 83.8 bits (42), Expect = 2e-13
 Identities = 45/46 (97%)
 Strand = Plus / Minus

                                                               
Query: 1         ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                 |||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 115938137 ggacttcccgtgtggctcacaacataactacttggcgttgcttcta 115938092



 Score = 83.8 bits (42), Expect = 2e-13
 Identities = 45/46 (97%)
 Strand = Plus / Plus

                                                               
Query: 1         ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                 |||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 139750614 ggacttcccgtgtggctcacaacataactacttggcgttgcttcta 139750659



 Score = 83.8 bits (42), Expect = 2e-13
 Identities = 45/46 (97%)
 Strand = Plus / Minus

                                                               
Query: 1         ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                 |||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 139809217 ggacttcccgtgtggctcacaacataactacttggcgttgcttcta 139809172



 Score = 75.8 bits (38), Expect = 5e-11
 Identities = 44/46 (95%)
 Strand = Plus / Minus

                                                             
Query: 1       ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 46
               ||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 7067598 ggacttcccctgtggctcacaacataactactcagcgttgcttcta 7067553



 Score = 75.8 bits (38), Expect = 5e-11
 Identities = 44/46 (95%)
 Strand = Plus / Plus

                                                              
Query: 1        ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                ||||||||| |||||||||||||||||||||| |||||||||||||
Sbjct: 25951852 ggacttcccatgtggctcacaacataactacttggcgttgcttcta 25951897



 Score = 75.8 bits (38), Expect = 5e-11
 Identities = 44/46 (95%)
 Strand = Plus / Plus

                                                               
Query: 1         ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                 ||||||||||||||||||||| ||| ||||||||||||||||||||
Sbjct: 103138595 ggacttcccgtgtggctcacagcatgactactcggcgttgcttcta 103138640



 Score = 71.9 bits (36), Expect = 7e-10
 Identities = 42/44 (95%)
 Strand = Plus / Plus

                                                             
Query: 1         ggacttcccgtgtggctcacaacataactactcggcgttgcttc 44
                 ||||||||  ||||||||||||||||||||||||||||||||||
Sbjct: 128547541 ggacttcctctgtggctcacaacataactactcggcgttgcttc 128547584



 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 43/46 (93%)
 Strand = Plus / Plus

                                                              
Query: 1        ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                ||||||||| |||||||||||||||| ||||||||| |||||||||
Sbjct: 23059149 ggacttcccatgtggctcacaacatacctactcggcattgcttcta 23059194



 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 43/46 (93%)
 Strand = Plus / Plus

                                                              
Query: 1        ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                ||||||||| ||||||||||||||||||||||| ||||| ||||||
Sbjct: 87410637 ggacttcccatgtggctcacaacataactactcagcgttccttcta 87410682



 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 43/46 (93%)
 Strand = Plus / Plus

                                                              
Query: 1        ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                ||||||||||||||||||||||| ||||| ||| ||||||||||||
Sbjct: 93977557 ggacttcccgtgtggctcacaacctaactcctcagcgttgcttcta 93977602



 Score = 65.9 bits (33), Expect = 5e-08
 Identities = 42/45 (93%)
 Strand = Plus / Plus

                                                             
Query: 2        gacttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                ||||||| |||||| ||||||||||||||||| ||||||||||||
Sbjct: 96018635 gacttcctgtgtggttcacaacataactactcagcgttgcttcta 96018679



 Score = 65.9 bits (33), Expect = 5e-08
 Identities = 42/45 (93%)
 Strand = Plus / Minus

                                                              
Query: 1         ggacttcccgtgtggctcacaacataactactcggcgttgcttct 45
                 ||||||| ||||||||||||||| |||||||||||| ||||||||
Sbjct: 132924013 ggacttcacgtgtggctcacaacgtaactactcggcattgcttct 132923969



 Score = 65.9 bits (33), Expect = 5e-08
 Identities = 42/45 (93%)
 Strand = Plus / Plus

                                                              
Query: 1         ggacttcccgtgtggctcacaacataactactcggcgttgcttct 45
                 ||||||||| |||||||||| |||||||||||||| |||||||||
Sbjct: 152585486 ggacttcccatgtggctcacgacataactactcggtgttgcttct 152585530



 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 32/32 (100%)
 Strand = Plus / Plus

                                                
Query: 1        ggacttcccgtgtggctcacaacataactact 32
                ||||||||||||||||||||||||||||||||
Sbjct: 55257555 ggacttcccgtgtggctcacaacataactact 55257586



 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 42/46 (91%)
 Strand = Plus / Plus

                                                              
Query: 1        ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                ||||||||| |||||| ||||||||||||||||| ||| |||||||
Sbjct: 19817303 ggacttcccctgtggcccacaacataactactcgacgtagcttcta 19817348



 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 42/46 (91%)
 Strand = Plus / Plus

                                                              
Query: 1        ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                ||||||||| ||||||||||||| |||||||  |||||||||||||
Sbjct: 95911507 ggacttcccttgtggctcacaacttaactacaaggcgttgcttcta 95911552



 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 42/46 (91%)
 Strand = Plus / Plus

                                                               
Query: 1         ggacttcccgtgtggctcacaacataactactcggcgttgcttcta 46
                 ||||||||| |||||||||||||| |||||| |||| |||||||||
Sbjct: 114622898 ggacttcccatgtggctcacaacacaactacccggcattgcttcta 114622943


  Database: Sscrofa_10.2.fasta
    Posted date:  Nov 16, 2011 10:34 AM
  Number of letters in database: 2,808,509,378
  Number of sequences in database:  4582
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 26,905,357
Number of extensions: 1279
Number of successful extensions: 1279
Number of sequences better than 1.0e-05: 31
Number of HSP's gapped: 1275
Number of HSP's successfully gapped: 311
Length of query: 1148
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 1127
Effective length of database: 2,808,413,156
Effective search space: 3165081626812
Effective search space used: 3165081626812
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)