Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-000771
(1445 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001075181.1| SERPINA3-8 [Bos taurus]. 361 e-143
Alignment gi|NP_001139774.1| serpin A3-6 [Bos taurus]. 355 e-137
Alignment gi|NP_777193.2| serpin A3-1 precursor [Bos taurus]. 349 e-137
Alignment gi|NP_001139773.1| serpin A3-2 [Bos taurus]. 350 e-136
Alignment gi|NP_001075213.1| serpin A3-5 [Bos taurus]. 347 e-135
Alignment gi|XP_002696874.1| PREDICTED: endopin 2C-like [Bos taurus]. 348 e-135
Alignment gi|XP_001252647.3| PREDICTED: endopin 2B-like [Bos taurus]. 342 e-134
Alignment gi|NP_001033293.1| serpin A3-3 [Bos taurus]. 342 e-133
Alignment gi|NP_001012283.2| serpin A3-7 [Bos taurus]. 335 e-131
Alignment gi|XP_001787316.2| PREDICTED: endopin 2C-like [Bos taurus]. 348 e-115
>ref|NP_001075181.1| SERPINA3-8 [Bos taurus].
Length = 418
Score = 361 bits (926), Expect(2) = e-143
Identities = 188/287 (65%), Positives = 219/287 (76%)
Frame = +1
Query: 130 MRAEGMSXXXXXXXXXXXXCSRVHCVPADDLASKTVTLKGQITKLPAHNTAVVSSNTDFA 309
MRAE MS CSRVHC+P + + + + T + H+ A SSNTDFA
Sbjct: 1 MRAERMSPLLALGLLVSGLCSRVHCLPENVAPEE----RHKGTSVDGHSLA--SSNTDFA 54
Query: 310 FSLYKQLVSLDPNKNVIFSPLSVSIALAFLSLGARGSTLTELLEGLKFNLTKTPEAEIHQ 489
FSLYKQL +PNKNVIFSPLS+SIALAFLSLGARG T+TE+LEGLKFNLT+TPE EIHQ
Sbjct: 55 FSLYKQLALKNPNKNVIFSPLSISIALAFLSLGARGPTVTEILEGLKFNLTETPEREIHQ 114
Query: 490 GFQHLLRALSQPSNLLQLNVGNAMFVDERLKLLDKFVQDARELYFSEVFSISFKDSDAAV 669
GFQHLL+ LS+PSN LQL+VGN MFV E+LKLLDKF +DA LY SE FS +FKD + A
Sbjct: 115 GFQHLLQMLSRPSNELQLSVGNTMFVQEQLKLLDKFREDALALYTSEAFSTNFKDPETAK 174
Query: 670 EFINNYVKNKTKGKIVDLFKQLSPDTVLVLVNCIYFKAKWKTPFDPSFTTEADFHVSKNR 849
IN+YVKNKT+GKIVDLFK L P T ++LVN IYFKA+W+TPFDP T ++ FHVSKN+
Sbjct: 175 SLINDYVKNKTRGKIVDLFKDLDPLTKVILVNYIYFKAQWRTPFDPKQTYKSQFHVSKNK 234
Query: 850 TVRVPMMGISGRTLPYFRDEELACTVVELPYTSNDSALFILPDDGRM 990
TV VPMM I PYFRDEEL CT+VEL YTSNDSALFILPD+G+M
Sbjct: 235 TVEVPMMSIGDLVTPYFRDEELDCTLVELTYTSNDSALFILPDEGKM 281
Score = 166 bits (420), Expect(2) = e-143
Identities = 86/132 (65%), Positives = 105/132 (79%), Gaps = 1/132 (0%)
Frame = +3
Query: 1008 QLLPETLRRWRDSLHQRRITALHLPRFSVSGDYTLHDILPHLGIKKVFSHQADLSGITDQ 1187
+L+PE L RWR+SL+ R I L+LPRFS++ DY L DIL L IKKVF+ +ADLSGITD
Sbjct: 287 KLIPEMLTRWRESLYPRGIHELNLPRFSIATDYKLKDILSQLEIKKVFTQEADLSGITDD 346
Query: 1188 ARLKVSQVVHRAVLDVDEEGTEGAAATGISIELTSI-EFLTVHFNRPFLFSIIHKDTQSI 1364
L+VSQVVH+AVLDV EEGTEGAAATG+ + +TSI + + FNRPFL +I+ KDTQSI
Sbjct: 347 HELEVSQVVHKAVLDVGEEGTEGAAATGVKVGITSINNHIPLSFNRPFLIAIVLKDTQSI 406
Query: 1365 IFSGKVTDPSQA 1400
IF GKVT+PSQA
Sbjct: 407 IFLGKVTNPSQA 418
>ref|NP_001139774.1| serpin A3-6 [Bos taurus].
Length = 414
Score = 355 bits (911), Expect(2) = e-137
Identities = 186/287 (64%), Positives = 217/287 (75%)
Frame = +1
Query: 130 MRAEGMSXXXXXXXXXXXXCSRVHCVPADDLASKTVTLKGQITKLPAHNTAVVSSNTDFA 309
MR E +S CSRVHC+P + T + ++T + H+ A SSNTDFA
Sbjct: 1 MRTERVSPLLALGILVAGLCSRVHCLPEN----VTPEEQHKVTSVDGHSLA--SSNTDFA 54
Query: 310 FSLYKQLVSLDPNKNVIFSPLSVSIALAFLSLGARGSTLTELLEGLKFNLTKTPEAEIHQ 489
FSLYKQL DPNKNVIFSPLSVSIALAFLSLGA G T+TE+LEGLKFNLT+TPE EIHQ
Sbjct: 55 FSLYKQLALKDPNKNVIFSPLSVSIALAFLSLGAHGPTVTEILEGLKFNLTETPETEIHQ 114
Query: 490 GFQHLLRALSQPSNLLQLNVGNAMFVDERLKLLDKFVQDARELYFSEVFSISFKDSDAAV 669
GFQHLL+ +QPSN LQL+VGNA+FV E LKLLDKF++DAR LY SE F +F+D +AA
Sbjct: 115 GFQHLLQTFNQPSNQLQLSVGNAIFVQEELKLLDKFIEDARVLYSSEAFPTNFRDPEAAK 174
Query: 670 EFINNYVKNKTKGKIVDLFKQLSPDTVLVLVNCIYFKAKWKTPFDPSFTTEADFHVSKNR 849
IN+YVKNKT+GKI +LFK LSP T LVLVN +YFKA+WKT FDP T + +FHVS N+
Sbjct: 175 SLINDYVKNKTQGKIEELFKDLSPRTELVLVNYVYFKAQWKTRFDPKHTEKTEFHVSDNK 234
Query: 850 TVRVPMMGISGRTLPYFRDEELACTVVELPYTSNDSALFILPDDGRM 990
TV VPMM + T PYFRDEEL CT+VEL YTSNDSALFILPD G+M
Sbjct: 235 TVEVPMMTLDLET-PYFRDEELGCTLVELTYTSNDSALFILPDKGKM 280
Score = 153 bits (387), Expect(2) = e-137
Identities = 82/131 (62%), Positives = 99/131 (75%)
Frame = +3
Query: 1008 QLLPETLRRWRDSLHQRRITALHLPRFSVSGDYTLHDILPHLGIKKVFSHQADLSGITDQ 1187
+L PE L RWR+SL RRI L+LP+FS+ +Y L+D L +GIKK+F+ ADLSGIT
Sbjct: 286 KLTPEMLTRWRNSLQPRRIHELYLPKFSIKSNYELNDTLSQMGIKKIFT-DADLSGITGT 344
Query: 1188 ARLKVSQVVHRAVLDVDEEGTEGAAATGISIELTSIEFLTVHFNRPFLFSIIHKDTQSII 1367
A L VSQVVH A LDVDEEGTEGAAATGI IE T + + V NRPFL +++ KDTQSII
Sbjct: 345 ADLVVSQVVHGAALDVDEEGTEGAAATGIGIERTFLRII-VRVNRPFLIAVVLKDTQSII 403
Query: 1368 FSGKVTDPSQA 1400
F GKVT+PS+A
Sbjct: 404 FLGKVTNPSEA 414
>ref|NP_777193.2| serpin A3-1 precursor [Bos taurus].
Length = 411
Score = 349 bits (895), Expect(2) = e-137
Identities = 183/265 (69%), Positives = 211/265 (79%)
Frame = +1
Query: 196 VHCVPADDLASKTVTLKGQITKLPAHNTAVVSSNTDFAFSLYKQLVSLDPNKNVIFSPLS 375
VHC+P + V +K Q ++ H A SSNTDFAFSLYKQL +PNKNVI SPLS
Sbjct: 22 VHCLP------ENVVVKDQHRRVDGHTLA--SSNTDFAFSLYKQLPLKNPNKNVILSPLS 73
Query: 376 VSIALAFLSLGARGSTLTELLEGLKFNLTKTPEAEIHQGFQHLLRALSQPSNLLQLNVGN 555
VSIALAFLSLGARGSTLTE+LEGLKFNLT+ E EIH FQHLL+AL+QPSN LQL+VGN
Sbjct: 74 VSIALAFLSLGARGSTLTEILEGLKFNLTEIQEKEIHHSFQHLLQALNQPSNQLQLSVGN 133
Query: 556 AMFVDERLKLLDKFVQDARELYFSEVFSISFKDSDAAVEFINNYVKNKTKGKIVDLFKQL 735
AMFV E LKLLDKF++DA+ LY SE F +F+DS+AA IN+YVKNKT+GKI +LFK L
Sbjct: 134 AMFVQEELKLLDKFIEDAQVLYSSEAFPTNFRDSEAARSLINDYVKNKTQGKIEELFKYL 193
Query: 736 SPDTVLVLVNCIYFKAKWKTPFDPSFTTEADFHVSKNRTVRVPMMGISGRTLPYFRDEEL 915
SP T LVLVN IYFKA+WKTPFDP T +A+FHVS N+TV VPMM + T PYFRDEEL
Sbjct: 194 SPRTELVLVNYIYFKAQWKTPFDPKHTEQAEFHVSDNKTVEVPMMTLDLET-PYFRDEEL 252
Query: 916 ACTVVELPYTSNDSALFILPDDGRM 990
CT+VEL YTSNDSALFILPD+G+M
Sbjct: 253 GCTLVELTYTSNDSALFILPDEGKM 277
Score = 158 bits (400), Expect(2) = e-137
Identities = 85/131 (64%), Positives = 103/131 (78%)
Frame = +3
Query: 1008 QLLPETLRRWRDSLHQRRITALHLPRFSVSGDYTLHDILPHLGIKKVFSHQADLSGITDQ 1187
+L PETL RWR+SL RRI L+LP+FS+ +Y L+DIL LGI+K+F++ ADLSGIT
Sbjct: 283 KLTPETLTRWRNSLQPRRIHELYLPKFSIKSNYELNDILSQLGIRKIFAN-ADLSGITGT 341
Query: 1188 ARLKVSQVVHRAVLDVDEEGTEGAAATGISIELTSIEFLTVHFNRPFLFSIIHKDTQSII 1367
A L VSQVVH A LDVDEEGTEGAAATGIS+E T + + V NRPFL +I+ KDTQSII
Sbjct: 342 ADLVVSQVVHGAALDVDEEGTEGAAATGISMERTILRII-VRVNRPFLIAIVLKDTQSII 400
Query: 1368 FSGKVTDPSQA 1400
F GKVT+PS+A
Sbjct: 401 FLGKVTNPSEA 411
>ref|NP_001139773.1| serpin A3-2 [Bos taurus].
Length = 411
Score = 350 bits (897), Expect(2) = e-136
Identities = 183/265 (69%), Positives = 211/265 (79%)
Frame = +1
Query: 196 VHCVPADDLASKTVTLKGQITKLPAHNTAVVSSNTDFAFSLYKQLVSLDPNKNVIFSPLS 375
VHC+P + V +K Q ++ H A SSNTDFAFSLYKQL +PNKNVI SPLS
Sbjct: 22 VHCLP------ENVVVKDQHRRVDGHTLA--SSNTDFAFSLYKQLALKNPNKNVILSPLS 73
Query: 376 VSIALAFLSLGARGSTLTELLEGLKFNLTKTPEAEIHQGFQHLLRALSQPSNLLQLNVGN 555
VSIALAFLSLGARGSTLTE+LEGLKFNLT+ E EIH FQHLL+AL+QPSN LQL+VGN
Sbjct: 74 VSIALAFLSLGARGSTLTEILEGLKFNLTEIQEKEIHHSFQHLLQALNQPSNQLQLSVGN 133
Query: 556 AMFVDERLKLLDKFVQDARELYFSEVFSISFKDSDAAVEFINNYVKNKTKGKIVDLFKQL 735
AMFV E LKLLDKF++DA+ LY SE F +F+DS+AA IN+YVKNKT+GKI +LFK L
Sbjct: 134 AMFVQEELKLLDKFIEDAQVLYSSEAFPTNFRDSEAARSLINDYVKNKTQGKIEELFKYL 193
Query: 736 SPDTVLVLVNCIYFKAKWKTPFDPSFTTEADFHVSKNRTVRVPMMGISGRTLPYFRDEEL 915
SP T LVLVN IYFKA+WKTPFDP T +A+FHVS N+TV VPMM + T PYFRDEEL
Sbjct: 194 SPRTELVLVNYIYFKAQWKTPFDPKHTEQAEFHVSDNKTVEVPMMTLDLET-PYFRDEEL 252
Query: 916 ACTVVELPYTSNDSALFILPDDGRM 990
CT+VEL YTSNDSALFILPD+G+M
Sbjct: 253 GCTLVELTYTSNDSALFILPDEGKM 277
Score = 156 bits (394), Expect(2) = e-136
Identities = 83/131 (63%), Positives = 101/131 (77%)
Frame = +3
Query: 1008 QLLPETLRRWRDSLHQRRITALHLPRFSVSGDYTLHDILPHLGIKKVFSHQADLSGITDQ 1187
+L PETL RWR+SL RRI L+LP+FS+ +Y L+DIL LGI+K+F++ ADLSGIT
Sbjct: 283 KLTPETLTRWRNSLQPRRIHELYLPKFSIKSNYELNDILSQLGIRKIFAN-ADLSGITGT 341
Query: 1188 ARLKVSQVVHRAVLDVDEEGTEGAAATGISIELTSIEFLTVHFNRPFLFSIIHKDTQSII 1367
A L VSQVVH A LDVDEEGTEG AATGI IE T + + V NRPFL +++ KDTQSII
Sbjct: 342 ADLVVSQVVHGAALDVDEEGTEGVAATGIGIERTFLRII-VRVNRPFLIAVVLKDTQSII 400
Query: 1368 FSGKVTDPSQA 1400
F GKVT+PS+A
Sbjct: 401 FLGKVTNPSEA 411
>ref|NP_001075213.1| serpin A3-5 [Bos taurus].
Length = 411
Score = 347 bits (891), Expect(2) = e-135
Identities = 180/265 (67%), Positives = 214/265 (80%)
Frame = +1
Query: 196 VHCVPADDLASKTVTLKGQITKLPAHNTAVVSSNTDFAFSLYKQLVSLDPNKNVIFSPLS 375
VHC+P + V +K Q ++ +H A SSNTDFAFSLYKQL +PNKNV+FSPLS
Sbjct: 22 VHCLP------ENVVVKDQRRRVDSHTLA--SSNTDFAFSLYKQLALKNPNKNVMFSPLS 73
Query: 376 VSIALAFLSLGARGSTLTELLEGLKFNLTKTPEAEIHQGFQHLLRALSQPSNLLQLNVGN 555
VS+ALAFLSLGARG TLTE+LEGLKFNLT+ E +IHQGFQHLL+AL++PSN LQL+VGN
Sbjct: 74 VSMALAFLSLGARGPTLTEILEGLKFNLTEIQETQIHQGFQHLLQALNRPSNQLQLSVGN 133
Query: 556 AMFVDERLKLLDKFVQDARELYFSEVFSISFKDSDAAVEFINNYVKNKTKGKIVDLFKQL 735
AMFV E LKLLDKF++DAR LY SE F +F+DS+AA IN+YVKNKT+GKI +LFK L
Sbjct: 134 AMFVQEELKLLDKFIEDARVLYSSEAFPTNFRDSEAARSLINDYVKNKTQGKIEELFKYL 193
Query: 736 SPDTVLVLVNCIYFKAKWKTPFDPSFTTEADFHVSKNRTVRVPMMGISGRTLPYFRDEEL 915
SP TVLVLVN IYFKA+WKT FDP T +A+FHVSKN+TV VPMM + T PYFRD+EL
Sbjct: 194 SPRTVLVLVNYIYFKAQWKTRFDPKHTEQAEFHVSKNKTVEVPMMTLDLET-PYFRDKEL 252
Query: 916 ACTVVELPYTSNDSALFILPDDGRM 990
C +VEL Y+SNDSALFILPD+G+M
Sbjct: 253 GCMLVELTYSSNDSALFILPDEGKM 277
Score = 155 bits (393), Expect(2) = e-135
Identities = 83/131 (63%), Positives = 100/131 (76%)
Frame = +3
Query: 1008 QLLPETLRRWRDSLHQRRITALHLPRFSVSGDYTLHDILPHLGIKKVFSHQADLSGITDQ 1187
+L PETL RWR+SL RRI L+LP+FS+ +Y L+D L +GIKK+F+ ADLSGIT
Sbjct: 283 KLTPETLTRWRNSLQPRRIHELYLPKFSIKSNYELNDTLSQMGIKKIFT-DADLSGITGT 341
Query: 1188 ARLKVSQVVHRAVLDVDEEGTEGAAATGISIELTSIEFLTVHFNRPFLFSIIHKDTQSII 1367
A L VSQVVH A LDVDEEGTEGAAATGI IE T + + V NRPFL +++ KDTQSII
Sbjct: 342 ADLVVSQVVHGAALDVDEEGTEGAAATGIGIERTFLRII-VRVNRPFLIAVVLKDTQSII 400
Query: 1368 FSGKVTDPSQA 1400
F GKVT+PS+A
Sbjct: 401 FLGKVTNPSEA 411
>ref|XP_002696874.1| PREDICTED: endopin 2C-like [Bos taurus].
Length = 417
Score = 348 bits (892), Expect(2) = e-135
Identities = 184/287 (64%), Positives = 216/287 (75%)
Frame = +1
Query: 130 MRAEGMSXXXXXXXXXXXXCSRVHCVPADDLASKTVTLKGQITKLPAHNTAVVSSNTDFA 309
MR E MS CSRVHC+P + T + ++T + H+ A SSNTDFA
Sbjct: 1 MRTERMSPLLALGLLVSGLCSRVHCLPEN----VTPEEQHKVTSVDGHSLA--SSNTDFA 54
Query: 310 FSLYKQLVSLDPNKNVIFSPLSVSIALAFLSLGARGSTLTELLEGLKFNLTKTPEAEIHQ 489
FSLYKQL DPNKNVIFSPLS+SIALAFLSLGA G T+TE+LEGLKFNLT+TPE EIHQ
Sbjct: 55 FSLYKQLALKDPNKNVIFSPLSISIALAFLSLGAHGPTVTEILEGLKFNLTETPETEIHQ 114
Query: 490 GFQHLLRALSQPSNLLQLNVGNAMFVDERLKLLDKFVQDARELYFSEVFSISFKDSDAAV 669
GFQHLL+ +QPSN LQL+VGNA+FV E LKLLDKF +DA Y SEV SI+FKDS+AAV
Sbjct: 115 GFQHLLQTFNQPSNQLQLSVGNAIFVPEELKLLDKFRKDAEAFYASEVLSINFKDSEAAV 174
Query: 670 EFINNYVKNKTKGKIVDLFKQLSPDTVLVLVNCIYFKAKWKTPFDPSFTTEADFHVSKNR 849
+ IN YVKNKT GKI L L T L+L+N I+FKA+WKTPF+P+ T E++FHVSKN
Sbjct: 175 KLINEYVKNKTHGKIEKLLNDLDVLTNLILLNYIFFKAQWKTPFNPNHTYESEFHVSKNE 234
Query: 850 TVRVPMMGISGRTLPYFRDEELACTVVELPYTSNDSALFILPDDGRM 990
V+VPMM + T PYFRDEEL CT+VEL YTSNDSALFILPD+G+M
Sbjct: 235 RVKVPMMTLRLET-PYFRDEELGCTLVELTYTSNDSALFILPDEGKM 280
Score = 154 bits (389), Expect(2) = e-135
Identities = 82/133 (61%), Positives = 97/133 (72%), Gaps = 2/133 (1%)
Frame = +3
Query: 1008 QLLPETLRRWRDSLHQRRITALHLPRFSVSGDYTLHDILPHLGIKKVFSHQADLSGITDQ 1187
+L PETL RWR+SL R I L LPRFS+S DY L DIL LGIKK+F+ AD SGIT+
Sbjct: 286 KLTPETLTRWRNSLQPRHIDELSLPRFSISSDYQLRDILSQLGIKKIFTSDADFSGITND 345
Query: 1188 ARLKVSQVVHRAVLDVDEEGTEGAAATGISIELTSIEF--LTVHFNRPFLFSIIHKDTQS 1361
+L VSQV+H+AVLDV EEGTEGAA T + I TS+ L + FNRPFL SI K+TQS
Sbjct: 346 HKLAVSQVIHKAVLDVGEEGTEGAAVTAV-IMFTSLPLHALNISFNRPFLLSIFCKETQS 404
Query: 1362 IIFSGKVTDPSQA 1400
IIF GKVT+P +A
Sbjct: 405 IIFLGKVTNPKEA 417
>ref|XP_001252647.3| PREDICTED: endopin 2B-like [Bos taurus].
Length = 417
Score = 342 bits (877), Expect(2) = e-134
Identities = 182/287 (63%), Positives = 211/287 (73%)
Frame = +1
Query: 130 MRAEGMSXXXXXXXXXXXXCSRVHCVPADDLASKTVTLKGQITKLPAHNTAVVSSNTDFA 309
MR E MS CSRVHC+P + VT + Q ++ SSNTDFA
Sbjct: 1 MRTERMSPLLALGLLVSGFCSRVHCLP------ENVTPEEQHKGTSVDGHSLASSNTDFA 54
Query: 310 FSLYKQLVSLDPNKNVIFSPLSVSIALAFLSLGARGSTLTELLEGLKFNLTKTPEAEIHQ 489
FSLYKQL DPNKNVIFSPLS+SIALAFLSLGA T+TE+LEGLKFNLT+TPE EIHQ
Sbjct: 55 FSLYKQLALKDPNKNVIFSPLSISIALAFLSLGAHDHTVTEILEGLKFNLTETPETEIHQ 114
Query: 490 GFQHLLRALSQPSNLLQLNVGNAMFVDERLKLLDKFVQDARELYFSEVFSISFKDSDAAV 669
GFQHLL+ +QPSN LQL+VGNAMFV E LKLLDKF +DA Y SEV S +FKDS+AAV
Sbjct: 115 GFQHLLQTFNQPSNQLQLSVGNAMFVSEELKLLDKFRKDAEAFYASEVLSTNFKDSEAAV 174
Query: 670 EFINNYVKNKTKGKIVDLFKQLSPDTVLVLVNCIYFKAKWKTPFDPSFTTEADFHVSKNR 849
+ IN YVKNKT GKI LF L T L+L+N I+FKA+WKTPF+P+ T E++FHVS+N
Sbjct: 175 KLINEYVKNKTHGKIEKLFNDLDVLTNLILLNYIFFKAQWKTPFNPNHTYESEFHVSQNE 234
Query: 850 TVRVPMMGISGRTLPYFRDEELACTVVELPYTSNDSALFILPDDGRM 990
V VPMM + T PYFRDEEL CT+VEL YTSNDSALFILPD+G+M
Sbjct: 235 RVIVPMMTLYLET-PYFRDEELGCTLVELTYTSNDSALFILPDEGKM 280
Score = 157 bits (398), Expect(2) = e-134
Identities = 82/132 (62%), Positives = 98/132 (74%), Gaps = 1/132 (0%)
Frame = +3
Query: 1008 QLLPETLRRWRDSLHQRRITALHLPRFSVSGDYTLHDILPHLGIKKVFSHQADLSGITDQ 1187
+L PETL RWR+SL R I L LPRFS+S DY L DIL LGIKK+F+ AD SGIT+
Sbjct: 286 KLTPETLTRWRNSLQPRHIDELSLPRFSISSDYQLRDILSQLGIKKIFTSDADFSGITND 345
Query: 1188 ARLKVSQVVHRAVLDVDEEGTEGAAATGISIELTS-IEFLTVHFNRPFLFSIIHKDTQSI 1364
+L VSQV+H+AVLDV EEGTEGAA T + + +S + LTV FNRPFL SI K+TQSI
Sbjct: 346 HKLAVSQVIHKAVLDVGEEGTEGAAVTAVVMATSSLLHTLTVSFNRPFLLSIFCKETQSI 405
Query: 1365 IFSGKVTDPSQA 1400
IF GKVT+P +A
Sbjct: 406 IFLGKVTNPKEA 417
>ref|NP_001033293.1| serpin A3-3 [Bos taurus].
Length = 411
Score = 342 bits (876), Expect(2) = e-133
Identities = 177/265 (66%), Positives = 209/265 (78%)
Frame = +1
Query: 196 VHCVPADDLASKTVTLKGQITKLPAHNTAVVSSNTDFAFSLYKQLVSLDPNKNVIFSPLS 375
VHC+P + V +K + ++ H A SSNTDFAFSLYKQL +PNKNV+FSPLS
Sbjct: 22 VHCLP------ENVVVKDRHRRVDGHTLA--SSNTDFAFSLYKQLALKNPNKNVMFSPLS 73
Query: 376 VSIALAFLSLGARGSTLTELLEGLKFNLTKTPEAEIHQGFQHLLRALSQPSNLLQLNVGN 555
VS+ALAFLSLGARG TLTE+LEGLKFNLT+ E +IHQGFQHLL+AL++P N LQL+VGN
Sbjct: 74 VSMALAFLSLGARGPTLTEILEGLKFNLTEIQETQIHQGFQHLLQALNRPRNQLQLSVGN 133
Query: 556 AMFVDERLKLLDKFVQDARELYFSEVFSISFKDSDAAVEFINNYVKNKTKGKIVDLFKQL 735
AMFV E LKLLDKF++DAR LY SE F +F+D +AA IN+YVKNKT+GKI +LFK L
Sbjct: 134 AMFVQEELKLLDKFIEDARVLYSSEAFPTNFRDPEAAKSLINDYVKNKTQGKIEELFKDL 193
Query: 736 SPDTVLVLVNCIYFKAKWKTPFDPSFTTEADFHVSKNRTVRVPMMGISGRTLPYFRDEEL 915
SP T LVLVN +YFKA+WKT FDP T +A+FHVS N+TV VPMM + T PYFRDEEL
Sbjct: 194 SPRTELVLVNYVYFKAQWKTRFDPKHTEQAEFHVSDNKTVEVPMMTLDLET-PYFRDEEL 252
Query: 916 ACTVVELPYTSNDSALFILPDDGRM 990
CT+VEL YTSNDSALFILPD G+M
Sbjct: 253 GCTLVELTYTSNDSALFILPDKGKM 277
Score = 153 bits (387), Expect(2) = e-133
Identities = 82/131 (62%), Positives = 99/131 (75%)
Frame = +3
Query: 1008 QLLPETLRRWRDSLHQRRITALHLPRFSVSGDYTLHDILPHLGIKKVFSHQADLSGITDQ 1187
+L PE L RWR+SL RRI L+LP+FS+ +Y L+D L +GIKK+F+ ADLSGIT
Sbjct: 283 KLTPEMLTRWRNSLQPRRIHELYLPKFSIKSNYELNDTLSQMGIKKIFT-DADLSGITGT 341
Query: 1188 ARLKVSQVVHRAVLDVDEEGTEGAAATGISIELTSIEFLTVHFNRPFLFSIIHKDTQSII 1367
A L VSQVVH A LDVDEEGTEGAAATGI IE T + + V NRPFL +++ KDTQSII
Sbjct: 342 ADLVVSQVVHGAALDVDEEGTEGAAATGIGIERTFLRII-VRVNRPFLIAVVLKDTQSII 400
Query: 1368 FSGKVTDPSQA 1400
F GKVT+PS+A
Sbjct: 401 FLGKVTNPSEA 411
>ref|NP_001012283.2| serpin A3-7 [Bos taurus].
Length = 417
Score = 335 bits (860), Expect(2) = e-131
Identities = 179/287 (62%), Positives = 209/287 (72%)
Frame = +1
Query: 130 MRAEGMSXXXXXXXXXXXXCSRVHCVPADDLASKTVTLKGQITKLPAHNTAVVSSNTDFA 309
MR E S CSRVHC+P + VT + Q ++ SSNTDFA
Sbjct: 1 MRTERTSFLLALGLLVSGFCSRVHCLP------ENVTPEEQHKGTSVDGHSLASSNTDFA 54
Query: 310 FSLYKQLVSLDPNKNVIFSPLSVSIALAFLSLGARGSTLTELLEGLKFNLTKTPEAEIHQ 489
FSLYKQL DPNKNVIFSPLS+SIALAFLSLGA T+TE+LEGLKFNLT+TPE EIHQ
Sbjct: 55 FSLYKQLALKDPNKNVIFSPLSISIALAFLSLGAHDHTVTEILEGLKFNLTETPETEIHQ 114
Query: 490 GFQHLLRALSQPSNLLQLNVGNAMFVDERLKLLDKFVQDARELYFSEVFSISFKDSDAAV 669
GFQHLL+ +QPSN LQL+VGNAMFV E LKLLDKF +DA Y SEV S +FKDS+A V
Sbjct: 115 GFQHLLQTFNQPSNQLQLSVGNAMFVSEELKLLDKFRKDAEAFYASEVLSTNFKDSEADV 174
Query: 670 EFINNYVKNKTKGKIVDLFKQLSPDTVLVLVNCIYFKAKWKTPFDPSFTTEADFHVSKNR 849
+ IN YVKNKT GKI LF L T L+L+N I+FKA+WKTPF+P+ T E++FHVS+N
Sbjct: 175 KLINEYVKNKTHGKIEKLFNDLDVLTNLILLNYIFFKAQWKTPFNPNHTYESEFHVSQNE 234
Query: 850 TVRVPMMGISGRTLPYFRDEELACTVVELPYTSNDSALFILPDDGRM 990
V VPMM + T PYFRDEEL CT+VEL +TSNDSALFILPD+G+M
Sbjct: 235 RVIVPMMTLYLET-PYFRDEELGCTLVELTHTSNDSALFILPDEGKM 280
Score = 154 bits (388), Expect(2) = e-131
Identities = 81/132 (61%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Frame = +3
Query: 1008 QLLPETLRRWRDSLHQRRITALHLPRFSVSGDYTLHDILPHLGIKKVFSHQADLSGITDQ 1187
+L PETL RWR+SL R I L LPRFS+S Y L DIL LGIKK+F+ AD SGITD
Sbjct: 286 KLTPETLTRWRNSLQPRLIHRLRLPRFSISSHYQLKDILSQLGIKKIFTSDADFSGITDD 345
Query: 1188 ARLKVSQVVHRAVLDVDEEGTEGAAATGISIELTS-IEFLTVHFNRPFLFSIIHKDTQSI 1364
+L VS V+H+AVLDV EEGTEGAA T + + +S + LTV FNRPFL SI K+TQSI
Sbjct: 346 HKLAVSHVIHKAVLDVGEEGTEGAAVTAVVMATSSLLHTLTVSFNRPFLLSIFCKETQSI 405
Query: 1365 IFSGKVTDPSQA 1400
IF GKVT+P +A
Sbjct: 406 IFLGKVTNPKEA 417
>ref|XP_001787316.2| PREDICTED: endopin 2C-like [Bos taurus].
Length = 411
Score = 348 bits (892), Expect(2) = e-115
Identities = 184/287 (64%), Positives = 216/287 (75%)
Frame = +1
Query: 130 MRAEGMSXXXXXXXXXXXXCSRVHCVPADDLASKTVTLKGQITKLPAHNTAVVSSNTDFA 309
MR E MS CSRVHC+P + T + ++T + H+ A SSNTDFA
Sbjct: 1 MRTERMSPLLALGLLVSGLCSRVHCLPEN----VTPEEQHKVTSVDGHSLA--SSNTDFA 54
Query: 310 FSLYKQLVSLDPNKNVIFSPLSVSIALAFLSLGARGSTLTELLEGLKFNLTKTPEAEIHQ 489
FSLYKQL DPNKNVIFSPLS+SIALAFLSLGA G T+TE+LEGLKFNLT+TPE EIHQ
Sbjct: 55 FSLYKQLALKDPNKNVIFSPLSISIALAFLSLGAHGPTVTEILEGLKFNLTETPETEIHQ 114
Query: 490 GFQHLLRALSQPSNLLQLNVGNAMFVDERLKLLDKFVQDARELYFSEVFSISFKDSDAAV 669
GFQHLL+ +QPSN LQL+VGNA+FV E LKLLDKF +DA Y SEV SI+FKDS+AAV
Sbjct: 115 GFQHLLQTFNQPSNQLQLSVGNAIFVPEELKLLDKFRKDAEAFYASEVLSINFKDSEAAV 174
Query: 670 EFINNYVKNKTKGKIVDLFKQLSPDTVLVLVNCIYFKAKWKTPFDPSFTTEADFHVSKNR 849
+ IN YVKNKT GKI L L T L+L+N I+FKA+WKTPF+P+ T E++FHVSKN
Sbjct: 175 KLINEYVKNKTHGKIEKLLNDLDVLTNLILLNYIFFKAQWKTPFNPNHTYESEFHVSKNE 234
Query: 850 TVRVPMMGISGRTLPYFRDEELACTVVELPYTSNDSALFILPDDGRM 990
V+VPMM + T PYFRDEEL CT+VEL YTSNDSALFILPD+G+M
Sbjct: 235 RVKVPMMTLRLET-PYFRDEELGCTLVELTYTSNDSALFILPDEGKM 280
Score = 87.0 bits (214), Expect(2) = e-115
Identities = 57/133 (42%), Positives = 78/133 (58%), Gaps = 2/133 (1%)
Frame = +3
Query: 1008 QLLPETLRRWRDSLHQRRITALHLPRFSVSGDYTLHDILPHLGIKKVFSHQADLSGITDQ 1187
+L PETL RWR+SL R+I + +V+ + + ++ + + +S
Sbjct: 286 KLTPETLTRWRNSLQPRQIEQVD---STVTDQEQVDERRSSEALRPLLTPCLPISSGNVP 342
Query: 1188 ARLKVSQVVHRAVLDVDEEGTEGAAATGISIELTSIEF--LTVHFNRPFLFSIIHKDTQS 1361
L QV+H+AVLDV EEGTEGAA T + I TS+ L + FNRPFL SI K+TQS
Sbjct: 343 VSL---QVIHKAVLDVGEEGTEGAAVTAV-IMFTSLPLHALNISFNRPFLLSIFCKETQS 398
Query: 1362 IIFSGKVTDPSQA 1400
IIF GKVT+P +A
Sbjct: 399 IIFLGKVTNPKEA 411
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 56,801,610
Number of extensions: 1696603
Number of successful extensions: 9418
Number of sequences better than 1.0e-05: 92
Number of HSP's gapped: 9107
Number of HSP's successfully gapped: 171
Length of query: 481
Length of database: 17,681,374
Length adjustment: 106
Effective length of query: 375
Effective length of database: 14,174,046
Effective search space: 5315267250
Effective search space used: 5315267250
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-000771
(1445 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_537546.2| PREDICTED: similar to Alpha-1-antichymotrypsin ... 332 e-130
Alignment gi|NP_001073578.1| serpin peptidase inhibitor, clade A (alpha-1... 230 5e-85
Alignment gi|XP_547962.2| PREDICTED: similar to serine (or cysteine) prot... 214 8e-85
Alignment gi|XP_537544.2| PREDICTED: similar to serine (or cysteine) prot... 226 4e-84
Alignment gi|XP_547960.2| PREDICTED: similar to Corticosteroid-binding gl... 229 6e-82
Alignment gi|XP_855206.1| PREDICTED: similar to serine (or cysteine) prot... 204 7e-77
Alignment gi|XP_855210.1| PREDICTED: similar to serine (or cysteine) prot... 207 1e-75
Alignment gi|XP_537545.1| PREDICTED: similar to serine (or cysteine) prot... 197 1e-74
Alignment gi|XP_538128.1| PREDICTED: similar to Thyroxine-binding globuli... 220 1e-72
Alignment gi|XP_855208.1| PREDICTED: similar to Corticosteroid-binding gl... 159 3e-50
>ref|XP_537546.2| PREDICTED: similar to Alpha-1-antichymotrypsin precursor (ACT)
[Canis familiaris].
Length = 421
Score = 332 bits (852), Expect(2) = e-130
Identities = 168/270 (62%), Positives = 210/270 (77%)
Frame = +1
Query: 187 CSRVHCVPADDLASKTVTLKGQITKLPAHNTAVVSSNTDFAFSLYKQLVSLDPNKNVIFS 366
C VHC+P + VT + + ++ + SSNTDF SLYK+L S P+KNVIFS
Sbjct: 15 CPTVHCLPEGMRDPENVTQEDLPNETSENSLRLASSNTDFTLSLYKELASKSPDKNVIFS 74
Query: 367 PLSVSIALAFLSLGARGSTLTELLEGLKFNLTKTPEAEIHQGFQHLLRALSQPSNLLQLN 546
P+S+SIALAFLSLGA+G+T TE+LEGLKFNLT+ P+ EIH+GFQHLLRAL QPS+ LQL+
Sbjct: 75 PMSISIALAFLSLGAQGTTQTEILEGLKFNLTEIPDREIHRGFQHLLRALHQPSSELQLS 134
Query: 547 VGNAMFVDERLKLLDKFVQDARELYFSEVFSISFKDSDAAVEFINNYVKNKTKGKIVDLF 726
VGNAMFV E+LKLL+ FV+DAR LY SE FS +F++S AA + IN+YVKN+T+GKIVDL
Sbjct: 135 VGNAMFVGEQLKLLETFVEDARALYASEAFSTNFQNSAAAEKLINDYVKNRTQGKIVDLV 194
Query: 727 KQLSPDTVLVLVNCIYFKAKWKTPFDPSFTTEADFHVSKNRTVRVPMMGISGRTLPYFRD 906
K L T +VLVN I+ KAKWKTPFDP T ++ F VSK+R+V+VPMM + +PYFRD
Sbjct: 195 KDLDLHTAVVLVNYIFLKAKWKTPFDPRDTFKSKFQVSKSRSVKVPMMNLEDVWVPYFRD 254
Query: 907 EELACTVVELPYTSNDSALFILPDDGRMAA 996
+ L+CTVVEL YTSNDSALF+LPD+GRM A
Sbjct: 255 DALSCTVVELQYTSNDSALFVLPDEGRMEA 284
Score = 151 bits (382), Expect(2) = e-130
Identities = 76/133 (57%), Positives = 98/133 (73%), Gaps = 3/133 (2%)
Frame = +3
Query: 1011 LLPETLRRWRDSLHQRRITALHLPRFSVSGDYTLHDILPHLGIKKVFSHQADLSGITDQA 1190
LLPETLRRW SL RRI L+LP+FS+S Y L D+LP LG+++VF+++ADLS +T
Sbjct: 289 LLPETLRRWTHSLQMRRIDNLYLPKFSISSSYNLEDVLPQLGVREVFTNEADLSRVTGHK 348
Query: 1191 RLKVSQVVHRAVLDVDEEGTEGAAATGISIELTSIE---FLTVHFNRPFLFSIIHKDTQS 1361
L VSQ+VH+ +LDV E GTE AAATG + S + +TV FNRPFLF I HKDT++
Sbjct: 349 NLAVSQIVHKTLLDVTELGTEAAAATGSKVVFFSGKIGPLVTVRFNRPFLFCIHHKDTEN 408
Query: 1362 IIFSGKVTDPSQA 1400
I+F GKVT+P+QA
Sbjct: 409 ILFWGKVTNPNQA 421
>ref|NP_001073578.1| serpin peptidase inhibitor, clade A (alpha-1 antiproteinase,
antitrypsin), member 1 [Canis lupus familiaris].
Length = 415
Score = 230 bits (586), Expect(2) = 5e-85
Identities = 118/250 (47%), Positives = 163/250 (65%), Gaps = 3/250 (1%)
Frame = +1
Query: 250 QITKLPAHNTA---VVSSNTDFAFSLYKQLVSLDPNKNVIFSPLSVSIALAFLSLGARGS 420
Q T P H A + + DFAFSLY+Q+ N+ FSP+S++ A A LSLG +G
Sbjct: 33 QETDDPEHQPACHKIAPNLADFAFSLYRQVAQESNTTNIFFSPVSIATAFAMLSLGTKGD 92
Query: 421 TLTELLEGLKFNLTKTPEAEIHQGFQHLLRALSQPSNLLQLNVGNAMFVDERLKLLDKFV 600
T T++++GL FNLT+ E E+HQGF LL L+QP N LQL G+ +F+++ +KLL+KF+
Sbjct: 93 THTQIMQGLGFNLTERAEREVHQGFHQLLSILNQPDNQLQLTTGSGLFINDTIKLLNKFL 152
Query: 601 QDARELYFSEVFSISFKDSDAAVEFINNYVKNKTKGKIVDLFKQLSPDTVLVLVNCIYFK 780
+D R LY SE F+I+F+ ++ A + INNYV+ T+GKIVDL K L DTV LVN I+FK
Sbjct: 153 EDVRNLYHSEAFTINFRHTEEAKKQINNYVEKGTQGKIVDLVKDLDEDTVFALVNYIFFK 212
Query: 781 AKWKTPFDPSFTTEADFHVSKNRTVRVPMMGISGRTLPYFRDEELACTVVELPYTSNDSA 960
KW+ PF+ TTE DFHV ++ TV+VPMM G L+ V+ + Y N +A
Sbjct: 213 GKWEKPFEVEHTTEEDFHVDEHTTVKVPMMSRLG-MFDIQHCATLSSWVLLMEYVGNATA 271
Query: 961 LFILPDDGRM 990
FILPD+G+M
Sbjct: 272 FFILPDEGKM 281
Score = 104 bits (260), Expect(2) = 5e-85
Identities = 57/130 (43%), Positives = 86/130 (66%)
Frame = +3
Query: 1008 QLLPETLRRWRDSLHQRRITALHLPRFSVSGDYTLHDILPHLGIKKVFSHQADLSGITDQ 1187
+L E L ++ + + R +L LP+ S+SG Y L +L +GI KVFS +ADLSGIT++
Sbjct: 287 KLTKEVLAKFLEKRYARS-ASLRLPKLSISGTYDLKSVLSKMGITKVFSAEADLSGITEE 345
Query: 1188 ARLKVSQVVHRAVLDVDEEGTEGAAATGISIELTSIEFLTVHFNRPFLFSIIHKDTQSII 1367
L +S+ +H+AVL +DE+GTE A AT + S+ +V FN+PFL I+ +DT+S +
Sbjct: 346 GPLMLSKGLHKAVLTIDEKGTEAAGATFLEAIPMSMP-PSVDFNKPFLIIIVDRDTKSPL 404
Query: 1368 FSGKVTDPSQ 1397
F GKV +P+Q
Sbjct: 405 FMGKVVNPTQ 414
>ref|XP_547962.2| PREDICTED: similar to serine (or cysteine) proteinase inhibitor,
clade A (alpha-1 antiproteinase, antitrypsin), member 4
[Canis familiaris].
Length = 417
Score = 214 bits (544), Expect(2) = 8e-85
Identities = 105/236 (44%), Positives = 151/236 (63%)
Frame = +1
Query: 283 VVSSNTDFAFSLYKQLVSLDPNKNVIFSPLSVSIALAFLSLGARGSTLTELLEGLKFNLT 462
+ NT FA Y + S P N+ FSPLS+S + A LSLGAR + T++LEGL FNLT
Sbjct: 45 IAPGNTAFALHFYHLMASQSPGSNIFFSPLSISASYAMLSLGARSHSKTQILEGLGFNLT 104
Query: 463 KTPEAEIHQGFQHLLRALSQPSNLLQLNVGNAMFVDERLKLLDKFVQDARELYFSEVFSI 642
+ E++IH+GFQHLL L P + L++++G+ +F+ + L +L +F+ D+ Y S++F
Sbjct: 105 EVSESDIHRGFQHLLHTLHLPDDRLEMHMGSTLFLSQDLLILPEFLNDSVAFYDSKLFLT 164
Query: 643 SFKDSDAAVEFINNYVKNKTKGKIVDLFKQLSPDTVLVLVNCIYFKAKWKTPFDPSFTTE 822
+F D + IN+++K +T+GKIVDL +L+ D +VLVN IYFKA W+ PF PS TT
Sbjct: 165 NFHDPVGTTQLINDHIKEETQGKIVDLVSKLNTDIAMVLVNYIYFKALWEKPFQPSMTTT 224
Query: 823 ADFHVSKNRTVRVPMMGISGRTLPYFRDEELACTVVELPYTSNDSALFILPDDGRM 990
DFHV +N V+VPMM Y D L C+V+ + Y N +A FILP+ G+M
Sbjct: 225 QDFHVDENTVVQVPMMLQDTAHHWYLNDRYLPCSVLRMDYKGNMTAFFILPNRGKM 280
Score = 120 bits (300), Expect(2) = 8e-85
Identities = 63/131 (48%), Positives = 86/131 (65%), Gaps = 2/131 (1%)
Frame = +3
Query: 1011 LLPETLRRWRDSLHQRRITALHLPRFSVSGDYTLHDILPHLGIKKVFSHQADLSGITDQA 1190
L PE L RW L +R++ LH P+FS+SG Y L++ILP +G +FS Q DLSGIT +
Sbjct: 287 LTPEMLTRWNRLLQKRKLE-LHFPKFSISGSYQLNEILPKMGFVDLFSRQVDLSGITKEK 345
Query: 1191 RLKVSQVVHRAVLDVDEEGTEGAAATGISIELTSI--EFLTVHFNRPFLFSIIHKDTQSI 1364
+L+VS+ H+A+L+VDE GT+ AAATGI S + FNRPF I +TQSI
Sbjct: 346 KLQVSKSFHKAILEVDEVGTQAAAATGIFTTFLSAWHNHRVLWFNRPFFVVIFSTNTQSI 405
Query: 1365 IFSGKVTDPSQ 1397
+F GKV +P++
Sbjct: 406 LFLGKVVNPTK 416
>ref|XP_537544.2| PREDICTED: similar to serine (or cysteine) proteinase inhibitor,
clade A (alpha-1 antiproteinase, antitrypsin), member 9
[Canis familiaris].
Length = 418
Score = 226 bits (577), Expect(2) = 4e-84
Identities = 122/266 (45%), Positives = 167/266 (62%), Gaps = 1/266 (0%)
Frame = +1
Query: 196 VHCVPADDLASKTVTLKGQITKLPAHNTAVVSSNTDFAFSLYKQLVSLDPNKNVIFSPLS 375
++CVP SK A + SSNTDFAF LY++L+ P++NV FSPLS
Sbjct: 18 IYCVPPPRAPSKGSPCMSSTRSTAASQLS--SSNTDFAFRLYQRLILKTPDQNVFFSPLS 75
Query: 376 VSIALAFLSLGARGSTLTELLEGLKFNLTKTPEAEIHQGFQHLLRALSQPSNLLQLNVGN 555
VS LA LSLGAR +T T++L+GL FNLT PE+ IHQ FQHLL +L P L L +G+
Sbjct: 76 VSACLAMLSLGARSATKTQILQGLGFNLTHLPESSIHQAFQHLLHSLRVPGKDLDLRMGS 135
Query: 556 AMFVDERLKLLDKFVQDARELYFSEVFSISFKDSDAAVEFINNYVKNKTKGKIVDLFKQL 735
+F+ + L L F+ D + LY S+VFS F S A E IN+YV+ +TKGK+V+L + L
Sbjct: 136 VLFIKKELWLQTNFLDDVKRLYESKVFSTDFSSSSTAREKINSYVEKETKGKVVNLIQSL 195
Query: 736 SPDTVLVLVNCIYFKAKWKTPFDPSFTTEAD-FHVSKNRTVRVPMMGISGRTLPYFRDEE 912
P TV+VLVN I+FK KW+ PF+P +T+++ F V K TV+VPMM + D E
Sbjct: 196 EPLTVMVLVNHIFFKGKWEKPFNPGYTSKSSPFLVGKRTTVKVPMMH-QVEEFAFGVDAE 254
Query: 913 LACTVVELPYTSNDSALFILPDDGRM 990
L C+V+ + Y + +A F+LP G+M
Sbjct: 255 LKCSVLRMDYDEDTAAFFVLPGQGKM 280
Score = 105 bits (261), Expect(2) = 4e-84
Identities = 58/132 (43%), Positives = 82/132 (62%), Gaps = 3/132 (2%)
Frame = +3
Query: 1011 LLPETLRRWRDSLHQRRITALHLPRFSVSGDYTLHDILPHLGIKKVFSHQADLSGITDQA 1190
L TLR+W L Q+R + +P+FS+S Y L ILP +GI+ F AD SGIT +
Sbjct: 287 LSSRTLRKWNHLL-QKRWIEVFIPKFSLSASYDLETILPKMGIRDAFDKNADFSGITKRD 345
Query: 1191 RLKVSQVVHRAVLDVDEEGTEGAAATGISIELTSIE---FLTVHFNRPFLFSIIHKDTQS 1361
L++S+ H+AVLDV EEGTE AAAT + + S + V FNR FL +I++ T +
Sbjct: 346 FLQLSKATHKAVLDVSEEGTEAAAATATKLIVRSKDGPSHTVVRFNRSFLLLLINRATDA 405
Query: 1362 IIFSGKVTDPSQ 1397
I+F GKV +P++
Sbjct: 406 ILFLGKVENPTK 417
>ref|XP_547960.2| PREDICTED: similar to Corticosteroid-binding globulin precursor
(CBG) (Transcortin) [Canis familiaris].
Length = 404
Score = 229 bits (585), Expect(2) = 6e-82
Identities = 112/232 (48%), Positives = 155/232 (66%)
Frame = +1
Query: 295 NTDFAFSLYKQLVSLDPNKNVIFSPLSVSIALAFLSLGARGSTLTELLEGLKFNLTKTPE 474
N DFAF+LY+ LV+ P+KNV SP+S+S+ALA LSLGA G T +LL+GL FNLTK E
Sbjct: 42 NVDFAFNLYRHLVASSPDKNVFISPVSISMALAMLSLGACGYTRVQLLQGLGFNLTKMSE 101
Query: 475 AEIHQGFQHLLRALSQPSNLLQLNVGNAMFVDERLKLLDKFVQDARELYFSEVFSISFKD 654
AEIHQGF+HL L + +L++ +GNA+F+D L+LL+ F D + Y E ++ F+D
Sbjct: 102 AEIHQGFRHLRHLLEKSDTMLEMTMGNALFLDRSLELLEPFSADTKHYYDLEAWATDFQD 161
Query: 655 SDAAVEFINNYVKNKTKGKIVDLFKQLSPDTVLVLVNCIYFKAKWKTPFDPSFTTEADFH 834
A IN Y+KNKT+GKIVDL +L +++LVN I+FK W+ PFDP T E DF+
Sbjct: 162 GTGASRQINEYIKNKTQGKIVDLLSKLDSSAMVILVNYIFFKGTWEHPFDPESTREEDFY 221
Query: 835 VSKNRTVRVPMMGISGRTLPYFRDEELACTVVELPYTSNDSALFILPDDGRM 990
V++ VRVP M T+ + D+ L C +V+L Y N + FILP++G+M
Sbjct: 222 VNETTVVRVPTM-FQSSTIKHLNDQVLPCQLVQLEYMGNGTVFFILPEEGKM 272
Score = 94.7 bits (234), Expect(2) = 6e-82
Identities = 51/125 (40%), Positives = 79/125 (63%)
Frame = +3
Query: 1020 ETLRRWRDSLHQRRITALHLPRFSVSGDYTLHDILPHLGIKKVFSHQADLSGITDQARLK 1199
+T++RW +S + ++ L++P+ S+SG Y L IL +GI + + AD SG+T +A+ K
Sbjct: 282 DTIQRWSESFTRSQVN-LYIPKVSLSGAYDLRAILRDMGIADLLDNGADFSGMTREAQPK 340
Query: 1200 VSQVVHRAVLDVDEEGTEGAAATGISIELTSIEFLTVHFNRPFLFSIIHKDTQSIIFSGK 1379
+S+VVH+AVL + E+G E A G+ + S E L HFNRPF+ I T S +F GK
Sbjct: 341 LSKVVHKAVLQLHEKGLEAAGPAGVMPNVKS-EPLAFHFNRPFIVMIFDHFTWSSLFLGK 399
Query: 1380 VTDPS 1394
V +P+
Sbjct: 400 VVNPT 404
>ref|XP_855206.1| PREDICTED: similar to serine (or cysteine) proteinase inhibitor,
clade A (alpha-1 antiproteinase, antitrypsin), member 11
[Canis familiaris].
Length = 422
Score = 204 bits (518), Expect(2) = 7e-77
Identities = 111/270 (41%), Positives = 171/270 (63%), Gaps = 5/270 (1%)
Frame = +1
Query: 196 VHCVPADDLASKTVTL----KGQITKLPAHNTAVVSSNTDFAFSLYKQLVSLDPNKNVIF 363
VHC P K++ + + ++ + + T+FA LYKQL + + + N+ F
Sbjct: 17 VHCQPFSAHGDKSLGVPHAPRDHLSSPDPAYHKITPTITNFALHLYKQLAA-ETSGNIFF 75
Query: 364 SPLSVSIALAFLSLGARGSTLTELLEGLKFNLTKTPEAEIHQGFQHLLRALSQPSNLLQL 543
SP+S+S +LA LSLGA+ +T T++LEGL FNLT+TPEA+IH+GFQ L+ L PS+ L+L
Sbjct: 76 SPVSISTSLALLSLGAQVNTSTQILEGLGFNLTETPEADIHRGFQSLIHTLDLPSSKLEL 135
Query: 544 NVGNAMFVDERLKLLDKFVQDARELYFSEVFSISFKDSDAAVEFINNYVKNKTKGKIVDL 723
VGN++F+D++LK F+ RELY + FS +F DS IN YV+ +T G++ D
Sbjct: 136 KVGNSLFLDKQLKPQQHFLDTIRELYGAFAFSANFTDSATTRRQINEYVRKQTYGQVADG 195
Query: 724 FKQLSPDTVLVLVNCIYFKAKWKTPFDPSFTTEAD-FHVSKNRTVRVPMMGISGRTLPYF 900
++ + DT++VL+N I+FKAKWK PF T + + F V++ ++ +PMM +
Sbjct: 196 LQEFTQDTLMVLLNYIFFKAKWKHPFSRYQTQKQESFSVNERTSLHIPMMH-QKEMHRFL 254
Query: 901 RDEELACTVVELPYTSNDSALFILPDDGRM 990
D+E+ACTV+++ Y+ N AL ILPD G+M
Sbjct: 255 YDQEMACTVLQIEYSGNAMALLILPDPGKM 284
Score = 103 bits (257), Expect(2) = 7e-77
Identities = 56/131 (42%), Positives = 81/131 (61%), Gaps = 3/131 (2%)
Frame = +3
Query: 1011 LLPETLRRWRDSLHQRRITALHLPRFSVSGDYTLHDILPHLGIKKVFSHQADLSGITDQA 1190
L PETLR+W D + LHLPRFS+SG Y L +ILP +G+ +F+ +ADLSGIT+Q
Sbjct: 291 LQPETLRKW-DQWLLPSLLDLHLPRFSISGTYNLEEILPLIGLTNIFNLEADLSGITEQL 349
Query: 1191 RLKVSQVVHRAVLDVDEEGTEGAAATGISIE---LTSIEFLTVHFNRPFLFSIIHKDTQS 1361
+S+V H+A +D++ GT AA+ + + L + FNRPFL + TQS
Sbjct: 350 NKTISRVSHKATVDMNVWGTRAGAASSLLSQPQALNATLASQARFNRPFLVLLWEMTTQS 409
Query: 1362 IIFSGKVTDPS 1394
++F GKV +P+
Sbjct: 410 LLFLGKVVNPA 420
>ref|XP_855210.1| PREDICTED: similar to serine (or cysteine) proteinase inhibitor,
clade A (alpha-1 antiproteinase, antitrypsin), member 12
[Canis familiaris].
Length = 414
Score = 207 bits (528), Expect(2) = 1e-75
Identities = 102/236 (43%), Positives = 155/236 (65%)
Frame = +1
Query: 283 VVSSNTDFAFSLYKQLVSLDPNKNVIFSPLSVSIALAFLSLGARGSTLTELLEGLKFNLT 462
++ NTDF LY++L S P KN+ FSPLS+S A + LSLGA+ STL E+ +G FN
Sbjct: 48 LIKRNTDFGCKLYRKLASNSPRKNIFFSPLSISAAFSMLSLGAQDSTLDEIKQG--FNFR 105
Query: 463 KTPEAEIHQGFQHLLRALSQPSNLLQLNVGNAMFVDERLKLLDKFVQDARELYFSEVFSI 642
PE +IH+GF +L+ ++Q S L+L++ N +F+D++L+ KF+ + + LY ++
Sbjct: 106 NMPERDIHEGFHYLIYRMNQGSQDLELHLRNTLFIDQKLQPEKKFLTNVKNLYSADTVPT 165
Query: 643 SFKDSDAAVEFINNYVKNKTKGKIVDLFKQLSPDTVLVLVNCIYFKAKWKTPFDPSFTTE 822
+F++ + IN+YV KT+GKI +L K + P TV++L NCI+F+A+W+ FDP T E
Sbjct: 166 NFQNLGDTRKQINDYVSQKTQGKINNLIKNIDPGTVMLLTNCIFFRARWQHEFDPKITKE 225
Query: 823 ADFHVSKNRTVRVPMMGISGRTLPYFRDEELACTVVELPYTSNDSALFILPDDGRM 990
DF + N+ V+VPMM G DE+L+CT++E+PY SA FILPD+G+M
Sbjct: 226 EDFFLDGNQRVKVPMM-FRGGMYETGYDEQLSCTILEMPYQGTISATFILPDEGKM 280
Score = 95.9 bits (237), Expect(2) = 1e-75
Identities = 55/128 (42%), Positives = 75/128 (58%)
Frame = +3
Query: 1011 LLPETLRRWRDSLHQRRITALHLPRFSVSGDYTLHDILPHLGIKKVFSHQADLSGITDQA 1190
L +T RW+ L RR+ + LPRFS++G+Y L L +LGI K+F DL+ I+
Sbjct: 287 LKADTFDRWK-KLITRRVVDVSLPRFSITGNYDLKRTLSYLGITKIFEEHGDLTRISPHR 345
Query: 1191 RLKVSQVVHRAVLDVDEEGTEGAAATGISIELTSIEFLTVHFNRPFLFSIIHKDTQSIIF 1370
LKV + VH AVL +DE+GTEGAA +G L L V N+PFL I +IIF
Sbjct: 346 SLKVGEAVHEAVLKMDEKGTEGAAGSGAQ-TLPMQTPLPVKLNKPFLVFIKDDVVSTIIF 404
Query: 1371 SGKVTDPS 1394
GK+ +P+
Sbjct: 405 LGKIVNPT 412
>ref|XP_537545.1| PREDICTED: similar to serine (or cysteine) proteinase inhibitor,
clade A (alpha-1 antiproteinase, antitrypsin), member 5
[Canis familiaris].
Length = 407
Score = 197 bits (501), Expect(2) = 1e-74
Identities = 105/249 (42%), Positives = 151/249 (60%)
Frame = +1
Query: 259 KLPAHNTAVVSSNTDFAFSLYKQLVSLDPNKNVIFSPLSVSIALAFLSLGARGSTLTELL 438
K P + V ++ DFAF LY+ L + P++N+ FSPLS+S LA LSLGA ST ++L
Sbjct: 32 KEPPVASTVAPASRDFAFDLYRALATAAPDQNIFFSPLSISTTLAMLSLGAGSSTKVQIL 91
Query: 439 EGLKFNLTKTPEAEIHQGFQHLLRALSQPSNLLQLNVGNAMFVDERLKLLDKFVQDAREL 618
EGL + + E +H+ LL +QP +QL++GNA+F+ ++L D F+Q + L
Sbjct: 92 EGLGLHPQEGLEEALHRRIHQLLWDFAQPREDIQLSLGNALFISPTVRLQDTFLQAVKML 151
Query: 619 YFSEVFSISFKDSDAAVEFINNYVKNKTKGKIVDLFKQLSPDTVLVLVNCIYFKAKWKTP 798
Y ++ F +F D A + IN+YV +TKGKIVDL K L +V+VN I+FKAKW+T
Sbjct: 152 YLADTFPTNFGDPAGAQKQINDYVAKQTKGKIVDLAKDLDSTEAMVMVNYIFFKAKWETG 211
Query: 799 FDPSFTTEADFHVSKNRTVRVPMMGISGRTLPYFRDEELACTVVELPYTSNDSALFILPD 978
F+ T + DFHV+ V+VPMM Y+ D L+C VV +PY N +ALF+LP
Sbjct: 212 FNHKSTRKQDFHVTSEMVVQVPMMKQEDHYY-YYVDRNLSCRVVGVPYRGNATALFVLPG 270
Query: 979 DGRMAARGN 1005
+G+M N
Sbjct: 271 EGQMGQLEN 279
Score = 102 bits (254), Expect(2) = 1e-74
Identities = 54/126 (42%), Positives = 82/126 (65%), Gaps = 2/126 (1%)
Frame = +3
Query: 1020 ETLRRWRDSLHQRRITALHLPRFSVSGDYTLHDILPHLGIKKVFSHQADLSGITDQARLK 1199
+TL++W +R++ L+LP+FS+ G Y L +LP LGIK VF+ ADL+G+T+ ++
Sbjct: 284 KTLKKWLKMFTKRQLE-LYLPKFSIEGSYQLDKVLPTLGIKDVFTSHADLTGMTNDTNIQ 342
Query: 1200 VSQVVHRAVLDVDEEGTEGAAATGISIELTSIEFL--TVHFNRPFLFSIIHKDTQSIIFS 1373
VS++VH+A+++VDE GT+ AAAT S + FNRPF+ I+ T +I+F
Sbjct: 343 VSEMVHKAMVEVDESGTQAAAATEAIFMFKSAPMRPHKIMFNRPFMMLIVENAT-NILFL 401
Query: 1374 GKVTDP 1391
GKVT P
Sbjct: 402 GKVTHP 407
>ref|XP_538128.1| PREDICTED: similar to Thyroxine-binding globulin precursor
(T4-binding globulin) [Canis familiaris].
Length = 414
Score = 220 bits (560), Expect(2) = 1e-72
Identities = 117/266 (43%), Positives = 169/266 (63%), Gaps = 1/266 (0%)
Frame = +1
Query: 196 VHCVPADDLASKTVTLKGQITKLPAHNTAVVSSNTDFAFSLYKQLVSLDPNKNVIFSPLS 375
+HC + K +T + + S N DFAF+LY++ P++N+ FSP+S
Sbjct: 14 LHCASSIRSEGKVITCNSPPKNATFYKMS--SINADFAFNLYRRFTVETPDRNIFFSPVS 71
Query: 376 VSIALAFLSLGARGSTLTELLEGLKFNLTKTPEAEIHQGFQHLLRALSQPSNLLQLNVGN 555
+S ALA LS GA ST ++LE L FNLT TP AEI QGFQHL+ +L+ P L+L +GN
Sbjct: 72 ISAALAMLSFGACYSTQIQILESLGFNLTDTPMAEIQQGFQHLICSLNIPKKELELQMGN 131
Query: 556 AMFVDERLKLLDKFVQDARELYFSEVFSISFKDSDAAVEFINNYVKNKTKGKIVDLFKQL 735
+F+ ++LK L +F+ D + LY +EVFS F + AA + IN++V+ +TKG++V L + L
Sbjct: 132 TLFIGKQLKPLAQFLDDVKSLYATEVFSTDFSNVSAAQQLINSHVEKQTKGEVVGLIQDL 191
Query: 736 SPDTVLVLVNCIYFKAKWKTPFDPSFTTEA-DFHVSKNRTVRVPMMGISGRTLPYFRDEE 912
P+T++VLVN I+FKA+W PFDPS T E F V K TV+VPMM + D E
Sbjct: 192 KPNTIMVLVNYIHFKAQWANPFDPSKTEEGFSFSVDKTTTVKVPMMH-QMEQYYHLVDTE 250
Query: 913 LACTVVELPYTSNDSALFILPDDGRM 990
L CTV+++ Y+ N ALF+LP +G++
Sbjct: 251 LNCTVLQMDYSKNALALFVLPKEGQI 276
Score = 73.6 bits (179), Expect(2) = 1e-72
Identities = 43/130 (33%), Positives = 73/130 (56%), Gaps = 4/130 (3%)
Frame = +3
Query: 1020 ETLRRWRDSLHQRRITALHLPRFSVSGDYTLHDILPHLGIKKVFSHQADLSGITDQARLK 1199
+TL++W + L Q+ L +P+FS+S + L + +GI+ F+ A+ G+ LK
Sbjct: 286 KTLKKW-NRLLQKGWIDLFVPKFSISATHDLGATILKMGIQDAFADNANFRGLMGNNGLK 344
Query: 1200 VSQVVHRAVLDVDEEGTEGAAATGISI----ELTSIEFLTVHFNRPFLFSIIHKDTQSII 1367
S+ H+AVL + E+GTE + E+T + + + F+R FL I+ K T+SI+
Sbjct: 345 FSKAAHKAVLHIGEKGTEALLVPEVRFLDQPEITLLHPI-IQFDRSFLLLILEKSTRSIL 403
Query: 1368 FSGKVTDPSQ 1397
F GKV +P +
Sbjct: 404 FLGKVVNPME 413
>ref|XP_855208.1| PREDICTED: similar to Corticosteroid-binding globulin precursor
(CBG) (Transcortin) [Canis familiaris].
Length = 471
Score = 159 bits (402), Expect(2) = 3e-50
Identities = 89/241 (36%), Positives = 137/241 (56%)
Frame = +1
Query: 265 PAHNTAVVSSNTDFAFSLYKQLVSLDPNKNVIFSPLSVSIALAFLSLGARGSTLTELLEG 444
P H+ + + N FA L+K L+ P KN+IFSPLS+S + A LSLG R +TLT LLEG
Sbjct: 93 PVHHK-IEAGNKAFAHKLFKTLLMEHPRKNIIFSPLSISASFAMLSLGTRSTTLTNLLEG 151
Query: 445 LKFNLTKTPEAEIHQGFQHLLRALSQPSNLLQLNVGNAMFVDERLKLLDKFVQDARELYF 624
L F+L ++H GFQ +++ L Q + L + +F+D K+ F+ D + +Y
Sbjct: 152 LGFDLKVIKVWDVHHGFQSVIQMLKQLNRAGHLMHRDMLFIDSNRKINSPFLWDTQAMYD 211
Query: 625 SEVFSISFKDSDAAVEFINNYVKNKTKGKIVDLFKQLSPDTVLVLVNCIYFKAKWKTPFD 804
I F+D + IN++V KT + +L L+P T L LV+ ++FK W+ F
Sbjct: 212 VRARMIDFRDVVKTKKQINHFVAEKTHKRTKELITSLNPHTFLFLVDYVFFKGTWEMAFH 271
Query: 805 PSFTTEADFHVSKNRTVRVPMMGISGRTLPYFRDEELACTVVELPYTSNDSALFILPDDG 984
+ + DF V K+ TV V M+ +G+ + Y R EEL T+V++P+ N S + +LPD G
Sbjct: 272 SNLMHKEDFFVDKHTTVPVDMIWKTGQMI-YSRSEELFATMVKIPFVGNMSIVLVLPDVG 330
Query: 985 R 987
+
Sbjct: 331 Q 331
Score = 59.3 bits (142), Expect(2) = 3e-50
Identities = 36/110 (32%), Positives = 55/110 (50%), Gaps = 5/110 (4%)
Frame = +3
Query: 1077 LPRFSVSGDYTLHDILPHLGIKKVFSHQADLSGITDQARLKVSQVVHRAVLDVDEEG--- 1247
+P+F +S L ILP +GI VF+ A+ SGIT + + + +H A ++V +EG
Sbjct: 359 MPKFKISSKIDLKKILPKMGISNVFTTGANFSGITKEDFPTIFEAMHEATMEVSKEGKMD 418
Query: 1248 --TEGAAATGISIELTSIEFLTVHFNRPFLFSIIHKDTQSIIFSGKVTDP 1391
+ + I+ + L V FNRPF + TQ I GKV +P
Sbjct: 419 TSKDMDSRNTIACHTYTATPLVVKFNRPFFLFVEDWMTQRAILMGKVFNP 468
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 59,476,703
Number of extensions: 1764459
Number of successful extensions: 9429
Number of sequences better than 1.0e-05: 45
Number of HSP's gapped: 9220
Number of HSP's successfully gapped: 90
Length of query: 481
Length of database: 18,874,504
Length adjustment: 107
Effective length of query: 374
Effective length of database: 15,307,552
Effective search space: 5725024448
Effective search space used: 5725024448
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-000771
(1445 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001076.2| alpha-1-antichymotrypsin precursor [Homo sapien... 308 e-121
Alignment gi|NP_001002236.1| alpha-1-antitrypsin precursor [Homo sapiens]. 229 1e-86
Alignment gi|NP_001002235.1| alpha-1-antitrypsin precursor [Homo sapiens]. 229 1e-86
Alignment gi|NP_000286.3| alpha-1-antitrypsin precursor [Homo sapiens]. 229 1e-86
Alignment gi|NP_001121179.1| alpha-1-antitrypsin precursor [Homo sapiens]. 229 1e-86
Alignment gi|NP_001121178.1| alpha-1-antitrypsin precursor [Homo sapiens]. 229 1e-86
Alignment gi|NP_001121177.1| alpha-1-antitrypsin precursor [Homo sapiens]. 229 1e-86
Alignment gi|NP_001121176.1| alpha-1-antitrypsin precursor [Homo sapiens]. 229 1e-86
Alignment gi|NP_001121175.1| alpha-1-antitrypsin precursor [Homo sapiens]. 229 1e-86
Alignment gi|NP_001121174.1| alpha-1-antitrypsin precursor [Homo sapiens]. 229 1e-86
>ref|NP_001076.2| alpha-1-antichymotrypsin precursor [Homo sapiens].
Length = 423
Score = 308 bits (790), Expect(2) = e-121
Identities = 160/268 (59%), Positives = 198/268 (73%)
Frame = +1
Query: 187 CSRVHCVPADDLASKTVTLKGQITKLPAHNTAVVSSNTDFAFSLYKQLVSLDPNKNVIFS 366
C V C P L + +T + Q + + S+N DFAFSLYKQLV P+KNVIFS
Sbjct: 18 CPAVLCHPNSPLDEENLTQENQDRGTHV-DLGLASANVDFAFSLYKQLVLKAPDKNVIFS 76
Query: 367 PLSVSIALAFLSLGARGSTLTELLEGLKFNLTKTPEAEIHQGFQHLLRALSQPSNLLQLN 546
PLS+S ALAFLSLGA +TLTE+L+GLKFNLT+T EAEIHQ FQHLLR L+Q S+ LQL+
Sbjct: 77 PLSISTALAFLSLGAHNTTLTEILKGLKFNLTETSEAEIHQSFQHLLRTLNQSSDELQLS 136
Query: 547 VGNAMFVDERLKLLDKFVQDARELYFSEVFSISFKDSDAAVEFINNYVKNKTKGKIVDLF 726
+GNAMFV E+L LLD+F +DA+ LY SE F+ F+DS AA + IN+YVKN T+GKI DL
Sbjct: 137 MGNAMFVKEQLSLLDRFTEDAKRLYGSEAFATDFQDSAAAKKLINDYVKNGTRGKITDLI 196
Query: 727 KQLSPDTVLVLVNCIYFKAKWKTPFDPSFTTEADFHVSKNRTVRVPMMGISGRTLPYFRD 906
K L T++VLVN I+FKAKW+ PFDP T ++ F++SK + V VPMM + T+PYFRD
Sbjct: 197 KDLDSQTMMVLVNYIFFKAKWEMPFDPQDTHQSRFYLSKKKWVMVPMMSLHHLTIPYFRD 256
Query: 907 EELACTVVELPYTSNDSALFILPDDGRM 990
EEL+CTVVEL YT N SALFILPD +M
Sbjct: 257 EELSCTVVELKYTGNASALFILPDQDKM 284
Score = 147 bits (372), Expect(2) = e-121
Identities = 81/133 (60%), Positives = 97/133 (72%), Gaps = 3/133 (2%)
Frame = +3
Query: 1011 LLPETLRRWRDSLHQRRITALHLPRFSVSGDYTLHDILPHLGIKKVFSHQADLSGITDQA 1190
LLPETL+RWRDSL R I L+LP+FS+S DY L+DIL LGI++ F+ +ADLSGIT
Sbjct: 291 LLPETLKRWRDSLEFREIGELYLPKFSISRDYNLNDILLQLGIEEAFTSKADLSGITGAR 350
Query: 1191 RLKVSQVVHRAVLDVDEEGTEGAAATGISIELTS--IEFLT-VHFNRPFLFSIIHKDTQS 1361
L VSQVVH+AVLDV EEGTE +AAT + I L S +E T V FNRPFL I+ DTQ+
Sbjct: 351 NLAVSQVVHKAVLDVFEEGTEASAATAVKITLLSALVETRTIVRFNRPFLMIIVPTDTQN 410
Query: 1362 IIFSGKVTDPSQA 1400
I F KVT+P QA
Sbjct: 411 IFFMSKVTNPKQA 423
>ref|NP_001002236.1| alpha-1-antitrypsin precursor [Homo sapiens].
Length = 418
Score = 229 bits (584), Expect(2) = 1e-86
Identities = 122/261 (46%), Positives = 170/261 (65%)
Frame = +1
Query: 208 PADDLASKTVTLKGQITKLPAHNTAVVSSNTDFAFSLYKQLVSLDPNKNVIFSPLSVSIA 387
P D A KT T P N + + +FAFSLY+QL + N+ FSP+S++ A
Sbjct: 27 PQGDAAQKTDTSHHDQDH-PTFNK-ITPNLAEFAFSLYRQLAHQSNSTNIFFSPVSIATA 84
Query: 388 LAFLSLGARGSTLTELLEGLKFNLTKTPEAEIHQGFQHLLRALSQPSNLLQLNVGNAMFV 567
A LSLG + T E+LEGL FNLT+ PEA+IH+GFQ LLR L+QP + LQL GN +F+
Sbjct: 85 FAMLSLGTKADTHDEILEGLNFNLTEIPEAQIHEGFQELLRTLNQPDSQLQLTTGNGLFL 144
Query: 568 DERLKLLDKFVQDARELYFSEVFSISFKDSDAAVEFINNYVKNKTKGKIVDLFKQLSPDT 747
E LKL+DKF++D ++LY SE F+++F D++ A + IN+YV+ T+GKIVDL K+L DT
Sbjct: 145 SEGLKLVDKFLEDVKKLYHSEAFTVNFGDTEEAKKQINDYVEKGTQGKIVDLVKELDRDT 204
Query: 748 VLVLVNCIYFKAKWKTPFDPSFTTEADFHVSKNRTVRVPMMGISGRTLPYFRDEELACTV 927
V LVN I+FK KW+ PF+ T E DFHV + TV+VPMM G ++L+ V
Sbjct: 205 VFALVNYIFFKGKWERPFEVKDTEEEDFHVDQVTTVKVPMMKRLG-MFNIQHCKKLSSWV 263
Query: 928 VELPYTSNDSALFILPDDGRM 990
+ + Y N +A+F LPD+G++
Sbjct: 264 LLMKYLGNATAIFFLPDEGKL 284
Score = 110 bits (275), Expect(2) = 1e-86
Identities = 57/114 (50%), Positives = 81/114 (71%)
Frame = +3
Query: 1056 RRITALHLPRFSVSGDYTLHDILPHLGIKKVFSHQADLSGITDQARLKVSQVVHRAVLDV 1235
RR +LHLP+ S++G Y L +L LGI KVFS+ ADLSG+T++A LK+S+ VH+AVL +
Sbjct: 305 RRSASLHLPKLSITGTYDLKSVLGQLGITKVFSNGADLSGVTEEAPLKLSKAVHKAVLTI 364
Query: 1236 DEEGTEGAAATGISIELTSIEFLTVHFNRPFLFSIIHKDTQSIIFSGKVTDPSQ 1397
DE+GTE A A + SI V FN+PF+F +I ++T+S +F GKV +P+Q
Sbjct: 365 DEKGTEAAGAMFLEAIPMSIP-PEVKFNKPFVFLMIEQNTKSPLFMGKVVNPTQ 417
>ref|NP_001002235.1| alpha-1-antitrypsin precursor [Homo sapiens].
Length = 418
Score = 229 bits (584), Expect(2) = 1e-86
Identities = 122/261 (46%), Positives = 170/261 (65%)
Frame = +1
Query: 208 PADDLASKTVTLKGQITKLPAHNTAVVSSNTDFAFSLYKQLVSLDPNKNVIFSPLSVSIA 387
P D A KT T P N + + +FAFSLY+QL + N+ FSP+S++ A
Sbjct: 27 PQGDAAQKTDTSHHDQDH-PTFNK-ITPNLAEFAFSLYRQLAHQSNSTNIFFSPVSIATA 84
Query: 388 LAFLSLGARGSTLTELLEGLKFNLTKTPEAEIHQGFQHLLRALSQPSNLLQLNVGNAMFV 567
A LSLG + T E+LEGL FNLT+ PEA+IH+GFQ LLR L+QP + LQL GN +F+
Sbjct: 85 FAMLSLGTKADTHDEILEGLNFNLTEIPEAQIHEGFQELLRTLNQPDSQLQLTTGNGLFL 144
Query: 568 DERLKLLDKFVQDARELYFSEVFSISFKDSDAAVEFINNYVKNKTKGKIVDLFKQLSPDT 747
E LKL+DKF++D ++LY SE F+++F D++ A + IN+YV+ T+GKIVDL K+L DT
Sbjct: 145 SEGLKLVDKFLEDVKKLYHSEAFTVNFGDTEEAKKQINDYVEKGTQGKIVDLVKELDRDT 204
Query: 748 VLVLVNCIYFKAKWKTPFDPSFTTEADFHVSKNRTVRVPMMGISGRTLPYFRDEELACTV 927
V LVN I+FK KW+ PF+ T E DFHV + TV+VPMM G ++L+ V
Sbjct: 205 VFALVNYIFFKGKWERPFEVKDTEEEDFHVDQVTTVKVPMMKRLG-MFNIQHCKKLSSWV 263
Query: 928 VELPYTSNDSALFILPDDGRM 990
+ + Y N +A+F LPD+G++
Sbjct: 264 LLMKYLGNATAIFFLPDEGKL 284
Score = 110 bits (275), Expect(2) = 1e-86
Identities = 57/114 (50%), Positives = 81/114 (71%)
Frame = +3
Query: 1056 RRITALHLPRFSVSGDYTLHDILPHLGIKKVFSHQADLSGITDQARLKVSQVVHRAVLDV 1235
RR +LHLP+ S++G Y L +L LGI KVFS+ ADLSG+T++A LK+S+ VH+AVL +
Sbjct: 305 RRSASLHLPKLSITGTYDLKSVLGQLGITKVFSNGADLSGVTEEAPLKLSKAVHKAVLTI 364
Query: 1236 DEEGTEGAAATGISIELTSIEFLTVHFNRPFLFSIIHKDTQSIIFSGKVTDPSQ 1397
DE+GTE A A + SI V FN+PF+F +I ++T+S +F GKV +P+Q
Sbjct: 365 DEKGTEAAGAMFLEAIPMSIP-PEVKFNKPFVFLMIEQNTKSPLFMGKVVNPTQ 417
>ref|NP_000286.3| alpha-1-antitrypsin precursor [Homo sapiens].
Length = 418
Score = 229 bits (584), Expect(2) = 1e-86
Identities = 122/261 (46%), Positives = 170/261 (65%)
Frame = +1
Query: 208 PADDLASKTVTLKGQITKLPAHNTAVVSSNTDFAFSLYKQLVSLDPNKNVIFSPLSVSIA 387
P D A KT T P N + + +FAFSLY+QL + N+ FSP+S++ A
Sbjct: 27 PQGDAAQKTDTSHHDQDH-PTFNK-ITPNLAEFAFSLYRQLAHQSNSTNIFFSPVSIATA 84
Query: 388 LAFLSLGARGSTLTELLEGLKFNLTKTPEAEIHQGFQHLLRALSQPSNLLQLNVGNAMFV 567
A LSLG + T E+LEGL FNLT+ PEA+IH+GFQ LLR L+QP + LQL GN +F+
Sbjct: 85 FAMLSLGTKADTHDEILEGLNFNLTEIPEAQIHEGFQELLRTLNQPDSQLQLTTGNGLFL 144
Query: 568 DERLKLLDKFVQDARELYFSEVFSISFKDSDAAVEFINNYVKNKTKGKIVDLFKQLSPDT 747
E LKL+DKF++D ++LY SE F+++F D++ A + IN+YV+ T+GKIVDL K+L DT
Sbjct: 145 SEGLKLVDKFLEDVKKLYHSEAFTVNFGDTEEAKKQINDYVEKGTQGKIVDLVKELDRDT 204
Query: 748 VLVLVNCIYFKAKWKTPFDPSFTTEADFHVSKNRTVRVPMMGISGRTLPYFRDEELACTV 927
V LVN I+FK KW+ PF+ T E DFHV + TV+VPMM G ++L+ V
Sbjct: 205 VFALVNYIFFKGKWERPFEVKDTEEEDFHVDQVTTVKVPMMKRLG-MFNIQHCKKLSSWV 263
Query: 928 VELPYTSNDSALFILPDDGRM 990
+ + Y N +A+F LPD+G++
Sbjct: 264 LLMKYLGNATAIFFLPDEGKL 284
Score = 110 bits (275), Expect(2) = 1e-86
Identities = 57/114 (50%), Positives = 81/114 (71%)
Frame = +3
Query: 1056 RRITALHLPRFSVSGDYTLHDILPHLGIKKVFSHQADLSGITDQARLKVSQVVHRAVLDV 1235
RR +LHLP+ S++G Y L +L LGI KVFS+ ADLSG+T++A LK+S+ VH+AVL +
Sbjct: 305 RRSASLHLPKLSITGTYDLKSVLGQLGITKVFSNGADLSGVTEEAPLKLSKAVHKAVLTI 364
Query: 1236 DEEGTEGAAATGISIELTSIEFLTVHFNRPFLFSIIHKDTQSIIFSGKVTDPSQ 1397
DE+GTE A A + SI V FN+PF+F +I ++T+S +F GKV +P+Q
Sbjct: 365 DEKGTEAAGAMFLEAIPMSIP-PEVKFNKPFVFLMIEQNTKSPLFMGKVVNPTQ 417
>ref|NP_001121179.1| alpha-1-antitrypsin precursor [Homo sapiens].
Length = 418
Score = 229 bits (584), Expect(2) = 1e-86
Identities = 122/261 (46%), Positives = 170/261 (65%)
Frame = +1
Query: 208 PADDLASKTVTLKGQITKLPAHNTAVVSSNTDFAFSLYKQLVSLDPNKNVIFSPLSVSIA 387
P D A KT T P N + + +FAFSLY+QL + N+ FSP+S++ A
Sbjct: 27 PQGDAAQKTDTSHHDQDH-PTFNK-ITPNLAEFAFSLYRQLAHQSNSTNIFFSPVSIATA 84
Query: 388 LAFLSLGARGSTLTELLEGLKFNLTKTPEAEIHQGFQHLLRALSQPSNLLQLNVGNAMFV 567
A LSLG + T E+LEGL FNLT+ PEA+IH+GFQ LLR L+QP + LQL GN +F+
Sbjct: 85 FAMLSLGTKADTHDEILEGLNFNLTEIPEAQIHEGFQELLRTLNQPDSQLQLTTGNGLFL 144
Query: 568 DERLKLLDKFVQDARELYFSEVFSISFKDSDAAVEFINNYVKNKTKGKIVDLFKQLSPDT 747
E LKL+DKF++D ++LY SE F+++F D++ A + IN+YV+ T+GKIVDL K+L DT
Sbjct: 145 SEGLKLVDKFLEDVKKLYHSEAFTVNFGDTEEAKKQINDYVEKGTQGKIVDLVKELDRDT 204
Query: 748 VLVLVNCIYFKAKWKTPFDPSFTTEADFHVSKNRTVRVPMMGISGRTLPYFRDEELACTV 927
V LVN I+FK KW+ PF+ T E DFHV + TV+VPMM G ++L+ V
Sbjct: 205 VFALVNYIFFKGKWERPFEVKDTEEEDFHVDQVTTVKVPMMKRLG-MFNIQHCKKLSSWV 263
Query: 928 VELPYTSNDSALFILPDDGRM 990
+ + Y N +A+F LPD+G++
Sbjct: 264 LLMKYLGNATAIFFLPDEGKL 284
Score = 110 bits (275), Expect(2) = 1e-86
Identities = 57/114 (50%), Positives = 81/114 (71%)
Frame = +3
Query: 1056 RRITALHLPRFSVSGDYTLHDILPHLGIKKVFSHQADLSGITDQARLKVSQVVHRAVLDV 1235
RR +LHLP+ S++G Y L +L LGI KVFS+ ADLSG+T++A LK+S+ VH+AVL +
Sbjct: 305 RRSASLHLPKLSITGTYDLKSVLGQLGITKVFSNGADLSGVTEEAPLKLSKAVHKAVLTI 364
Query: 1236 DEEGTEGAAATGISIELTSIEFLTVHFNRPFLFSIIHKDTQSIIFSGKVTDPSQ 1397
DE+GTE A A + SI V FN+PF+F +I ++T+S +F GKV +P+Q
Sbjct: 365 DEKGTEAAGAMFLEAIPMSIP-PEVKFNKPFVFLMIEQNTKSPLFMGKVVNPTQ 417
>ref|NP_001121178.1| alpha-1-antitrypsin precursor [Homo sapiens].
Length = 418
Score = 229 bits (584), Expect(2) = 1e-86
Identities = 122/261 (46%), Positives = 170/261 (65%)
Frame = +1
Query: 208 PADDLASKTVTLKGQITKLPAHNTAVVSSNTDFAFSLYKQLVSLDPNKNVIFSPLSVSIA 387
P D A KT T P N + + +FAFSLY+QL + N+ FSP+S++ A
Sbjct: 27 PQGDAAQKTDTSHHDQDH-PTFNK-ITPNLAEFAFSLYRQLAHQSNSTNIFFSPVSIATA 84
Query: 388 LAFLSLGARGSTLTELLEGLKFNLTKTPEAEIHQGFQHLLRALSQPSNLLQLNVGNAMFV 567
A LSLG + T E+LEGL FNLT+ PEA+IH+GFQ LLR L+QP + LQL GN +F+
Sbjct: 85 FAMLSLGTKADTHDEILEGLNFNLTEIPEAQIHEGFQELLRTLNQPDSQLQLTTGNGLFL 144
Query: 568 DERLKLLDKFVQDARELYFSEVFSISFKDSDAAVEFINNYVKNKTKGKIVDLFKQLSPDT 747
E LKL+DKF++D ++LY SE F+++F D++ A + IN+YV+ T+GKIVDL K+L DT
Sbjct: 145 SEGLKLVDKFLEDVKKLYHSEAFTVNFGDTEEAKKQINDYVEKGTQGKIVDLVKELDRDT 204
Query: 748 VLVLVNCIYFKAKWKTPFDPSFTTEADFHVSKNRTVRVPMMGISGRTLPYFRDEELACTV 927
V LVN I+FK KW+ PF+ T E DFHV + TV+VPMM G ++L+ V
Sbjct: 205 VFALVNYIFFKGKWERPFEVKDTEEEDFHVDQVTTVKVPMMKRLG-MFNIQHCKKLSSWV 263
Query: 928 VELPYTSNDSALFILPDDGRM 990
+ + Y N +A+F LPD+G++
Sbjct: 264 LLMKYLGNATAIFFLPDEGKL 284
Score = 110 bits (275), Expect(2) = 1e-86
Identities = 57/114 (50%), Positives = 81/114 (71%)
Frame = +3
Query: 1056 RRITALHLPRFSVSGDYTLHDILPHLGIKKVFSHQADLSGITDQARLKVSQVVHRAVLDV 1235
RR +LHLP+ S++G Y L +L LGI KVFS+ ADLSG+T++A LK+S+ VH+AVL +
Sbjct: 305 RRSASLHLPKLSITGTYDLKSVLGQLGITKVFSNGADLSGVTEEAPLKLSKAVHKAVLTI 364
Query: 1236 DEEGTEGAAATGISIELTSIEFLTVHFNRPFLFSIIHKDTQSIIFSGKVTDPSQ 1397
DE+GTE A A + SI V FN+PF+F +I ++T+S +F GKV +P+Q
Sbjct: 365 DEKGTEAAGAMFLEAIPMSIP-PEVKFNKPFVFLMIEQNTKSPLFMGKVVNPTQ 417
>ref|NP_001121177.1| alpha-1-antitrypsin precursor [Homo sapiens].
Length = 418
Score = 229 bits (584), Expect(2) = 1e-86
Identities = 122/261 (46%), Positives = 170/261 (65%)
Frame = +1
Query: 208 PADDLASKTVTLKGQITKLPAHNTAVVSSNTDFAFSLYKQLVSLDPNKNVIFSPLSVSIA 387
P D A KT T P N + + +FAFSLY+QL + N+ FSP+S++ A
Sbjct: 27 PQGDAAQKTDTSHHDQDH-PTFNK-ITPNLAEFAFSLYRQLAHQSNSTNIFFSPVSIATA 84
Query: 388 LAFLSLGARGSTLTELLEGLKFNLTKTPEAEIHQGFQHLLRALSQPSNLLQLNVGNAMFV 567
A LSLG + T E+LEGL FNLT+ PEA+IH+GFQ LLR L+QP + LQL GN +F+
Sbjct: 85 FAMLSLGTKADTHDEILEGLNFNLTEIPEAQIHEGFQELLRTLNQPDSQLQLTTGNGLFL 144
Query: 568 DERLKLLDKFVQDARELYFSEVFSISFKDSDAAVEFINNYVKNKTKGKIVDLFKQLSPDT 747
E LKL+DKF++D ++LY SE F+++F D++ A + IN+YV+ T+GKIVDL K+L DT
Sbjct: 145 SEGLKLVDKFLEDVKKLYHSEAFTVNFGDTEEAKKQINDYVEKGTQGKIVDLVKELDRDT 204
Query: 748 VLVLVNCIYFKAKWKTPFDPSFTTEADFHVSKNRTVRVPMMGISGRTLPYFRDEELACTV 927
V LVN I+FK KW+ PF+ T E DFHV + TV+VPMM G ++L+ V
Sbjct: 205 VFALVNYIFFKGKWERPFEVKDTEEEDFHVDQVTTVKVPMMKRLG-MFNIQHCKKLSSWV 263
Query: 928 VELPYTSNDSALFILPDDGRM 990
+ + Y N +A+F LPD+G++
Sbjct: 264 LLMKYLGNATAIFFLPDEGKL 284
Score = 110 bits (275), Expect(2) = 1e-86
Identities = 57/114 (50%), Positives = 81/114 (71%)
Frame = +3
Query: 1056 RRITALHLPRFSVSGDYTLHDILPHLGIKKVFSHQADLSGITDQARLKVSQVVHRAVLDV 1235
RR +LHLP+ S++G Y L +L LGI KVFS+ ADLSG+T++A LK+S+ VH+AVL +
Sbjct: 305 RRSASLHLPKLSITGTYDLKSVLGQLGITKVFSNGADLSGVTEEAPLKLSKAVHKAVLTI 364
Query: 1236 DEEGTEGAAATGISIELTSIEFLTVHFNRPFLFSIIHKDTQSIIFSGKVTDPSQ 1397
DE+GTE A A + SI V FN+PF+F +I ++T+S +F GKV +P+Q
Sbjct: 365 DEKGTEAAGAMFLEAIPMSIP-PEVKFNKPFVFLMIEQNTKSPLFMGKVVNPTQ 417
>ref|NP_001121176.1| alpha-1-antitrypsin precursor [Homo sapiens].
Length = 418
Score = 229 bits (584), Expect(2) = 1e-86
Identities = 122/261 (46%), Positives = 170/261 (65%)
Frame = +1
Query: 208 PADDLASKTVTLKGQITKLPAHNTAVVSSNTDFAFSLYKQLVSLDPNKNVIFSPLSVSIA 387
P D A KT T P N + + +FAFSLY+QL + N+ FSP+S++ A
Sbjct: 27 PQGDAAQKTDTSHHDQDH-PTFNK-ITPNLAEFAFSLYRQLAHQSNSTNIFFSPVSIATA 84
Query: 388 LAFLSLGARGSTLTELLEGLKFNLTKTPEAEIHQGFQHLLRALSQPSNLLQLNVGNAMFV 567
A LSLG + T E+LEGL FNLT+ PEA+IH+GFQ LLR L+QP + LQL GN +F+
Sbjct: 85 FAMLSLGTKADTHDEILEGLNFNLTEIPEAQIHEGFQELLRTLNQPDSQLQLTTGNGLFL 144
Query: 568 DERLKLLDKFVQDARELYFSEVFSISFKDSDAAVEFINNYVKNKTKGKIVDLFKQLSPDT 747
E LKL+DKF++D ++LY SE F+++F D++ A + IN+YV+ T+GKIVDL K+L DT
Sbjct: 145 SEGLKLVDKFLEDVKKLYHSEAFTVNFGDTEEAKKQINDYVEKGTQGKIVDLVKELDRDT 204
Query: 748 VLVLVNCIYFKAKWKTPFDPSFTTEADFHVSKNRTVRVPMMGISGRTLPYFRDEELACTV 927
V LVN I+FK KW+ PF+ T E DFHV + TV+VPMM G ++L+ V
Sbjct: 205 VFALVNYIFFKGKWERPFEVKDTEEEDFHVDQVTTVKVPMMKRLG-MFNIQHCKKLSSWV 263
Query: 928 VELPYTSNDSALFILPDDGRM 990
+ + Y N +A+F LPD+G++
Sbjct: 264 LLMKYLGNATAIFFLPDEGKL 284
Score = 110 bits (275), Expect(2) = 1e-86
Identities = 57/114 (50%), Positives = 81/114 (71%)
Frame = +3
Query: 1056 RRITALHLPRFSVSGDYTLHDILPHLGIKKVFSHQADLSGITDQARLKVSQVVHRAVLDV 1235
RR +LHLP+ S++G Y L +L LGI KVFS+ ADLSG+T++A LK+S+ VH+AVL +
Sbjct: 305 RRSASLHLPKLSITGTYDLKSVLGQLGITKVFSNGADLSGVTEEAPLKLSKAVHKAVLTI 364
Query: 1236 DEEGTEGAAATGISIELTSIEFLTVHFNRPFLFSIIHKDTQSIIFSGKVTDPSQ 1397
DE+GTE A A + SI V FN+PF+F +I ++T+S +F GKV +P+Q
Sbjct: 365 DEKGTEAAGAMFLEAIPMSIP-PEVKFNKPFVFLMIEQNTKSPLFMGKVVNPTQ 417
>ref|NP_001121175.1| alpha-1-antitrypsin precursor [Homo sapiens].
Length = 418
Score = 229 bits (584), Expect(2) = 1e-86
Identities = 122/261 (46%), Positives = 170/261 (65%)
Frame = +1
Query: 208 PADDLASKTVTLKGQITKLPAHNTAVVSSNTDFAFSLYKQLVSLDPNKNVIFSPLSVSIA 387
P D A KT T P N + + +FAFSLY+QL + N+ FSP+S++ A
Sbjct: 27 PQGDAAQKTDTSHHDQDH-PTFNK-ITPNLAEFAFSLYRQLAHQSNSTNIFFSPVSIATA 84
Query: 388 LAFLSLGARGSTLTELLEGLKFNLTKTPEAEIHQGFQHLLRALSQPSNLLQLNVGNAMFV 567
A LSLG + T E+LEGL FNLT+ PEA+IH+GFQ LLR L+QP + LQL GN +F+
Sbjct: 85 FAMLSLGTKADTHDEILEGLNFNLTEIPEAQIHEGFQELLRTLNQPDSQLQLTTGNGLFL 144
Query: 568 DERLKLLDKFVQDARELYFSEVFSISFKDSDAAVEFINNYVKNKTKGKIVDLFKQLSPDT 747
E LKL+DKF++D ++LY SE F+++F D++ A + IN+YV+ T+GKIVDL K+L DT
Sbjct: 145 SEGLKLVDKFLEDVKKLYHSEAFTVNFGDTEEAKKQINDYVEKGTQGKIVDLVKELDRDT 204
Query: 748 VLVLVNCIYFKAKWKTPFDPSFTTEADFHVSKNRTVRVPMMGISGRTLPYFRDEELACTV 927
V LVN I+FK KW+ PF+ T E DFHV + TV+VPMM G ++L+ V
Sbjct: 205 VFALVNYIFFKGKWERPFEVKDTEEEDFHVDQVTTVKVPMMKRLG-MFNIQHCKKLSSWV 263
Query: 928 VELPYTSNDSALFILPDDGRM 990
+ + Y N +A+F LPD+G++
Sbjct: 264 LLMKYLGNATAIFFLPDEGKL 284
Score = 110 bits (275), Expect(2) = 1e-86
Identities = 57/114 (50%), Positives = 81/114 (71%)
Frame = +3
Query: 1056 RRITALHLPRFSVSGDYTLHDILPHLGIKKVFSHQADLSGITDQARLKVSQVVHRAVLDV 1235
RR +LHLP+ S++G Y L +L LGI KVFS+ ADLSG+T++A LK+S+ VH+AVL +
Sbjct: 305 RRSASLHLPKLSITGTYDLKSVLGQLGITKVFSNGADLSGVTEEAPLKLSKAVHKAVLTI 364
Query: 1236 DEEGTEGAAATGISIELTSIEFLTVHFNRPFLFSIIHKDTQSIIFSGKVTDPSQ 1397
DE+GTE A A + SI V FN+PF+F +I ++T+S +F GKV +P+Q
Sbjct: 365 DEKGTEAAGAMFLEAIPMSIP-PEVKFNKPFVFLMIEQNTKSPLFMGKVVNPTQ 417
>ref|NP_001121174.1| alpha-1-antitrypsin precursor [Homo sapiens].
Length = 418
Score = 229 bits (584), Expect(2) = 1e-86
Identities = 122/261 (46%), Positives = 170/261 (65%)
Frame = +1
Query: 208 PADDLASKTVTLKGQITKLPAHNTAVVSSNTDFAFSLYKQLVSLDPNKNVIFSPLSVSIA 387
P D A KT T P N + + +FAFSLY+QL + N+ FSP+S++ A
Sbjct: 27 PQGDAAQKTDTSHHDQDH-PTFNK-ITPNLAEFAFSLYRQLAHQSNSTNIFFSPVSIATA 84
Query: 388 LAFLSLGARGSTLTELLEGLKFNLTKTPEAEIHQGFQHLLRALSQPSNLLQLNVGNAMFV 567
A LSLG + T E+LEGL FNLT+ PEA+IH+GFQ LLR L+QP + LQL GN +F+
Sbjct: 85 FAMLSLGTKADTHDEILEGLNFNLTEIPEAQIHEGFQELLRTLNQPDSQLQLTTGNGLFL 144
Query: 568 DERLKLLDKFVQDARELYFSEVFSISFKDSDAAVEFINNYVKNKTKGKIVDLFKQLSPDT 747
E LKL+DKF++D ++LY SE F+++F D++ A + IN+YV+ T+GKIVDL K+L DT
Sbjct: 145 SEGLKLVDKFLEDVKKLYHSEAFTVNFGDTEEAKKQINDYVEKGTQGKIVDLVKELDRDT 204
Query: 748 VLVLVNCIYFKAKWKTPFDPSFTTEADFHVSKNRTVRVPMMGISGRTLPYFRDEELACTV 927
V LVN I+FK KW+ PF+ T E DFHV + TV+VPMM G ++L+ V
Sbjct: 205 VFALVNYIFFKGKWERPFEVKDTEEEDFHVDQVTTVKVPMMKRLG-MFNIQHCKKLSSWV 263
Query: 928 VELPYTSNDSALFILPDDGRM 990
+ + Y N +A+F LPD+G++
Sbjct: 264 LLMKYLGNATAIFFLPDEGKL 284
Score = 110 bits (275), Expect(2) = 1e-86
Identities = 57/114 (50%), Positives = 81/114 (71%)
Frame = +3
Query: 1056 RRITALHLPRFSVSGDYTLHDILPHLGIKKVFSHQADLSGITDQARLKVSQVVHRAVLDV 1235
RR +LHLP+ S++G Y L +L LGI KVFS+ ADLSG+T++A LK+S+ VH+AVL +
Sbjct: 305 RRSASLHLPKLSITGTYDLKSVLGQLGITKVFSNGADLSGVTEEAPLKLSKAVHKAVLTI 364
Query: 1236 DEEGTEGAAATGISIELTSIEFLTVHFNRPFLFSIIHKDTQSIIFSGKVTDPSQ 1397
DE+GTE A A + SI V FN+PF+F +I ++T+S +F GKV +P+Q
Sbjct: 365 DEKGTEAAGAMFLEAIPMSIP-PEVKFNKPFVFLMIEQNTKSPLFMGKVVNPTQ 417
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 58,040,913
Number of extensions: 1705962
Number of successful extensions: 9269
Number of sequences better than 1.0e-05: 61
Number of HSP's gapped: 9041
Number of HSP's successfully gapped: 117
Length of query: 481
Length of database: 18,297,164
Length adjustment: 106
Effective length of query: 375
Effective length of database: 14,802,980
Effective search space: 5551117500
Effective search space used: 5551117500
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-000771
(1445 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_033279.2| serine protease inhibitor A3M precursor [Mus mu... 276 e-110
Alignment gi|NP_032484.1| serine protease inhibitor A3C precursor [Mus mu... 278 e-110
Alignment gi|NP_033278.2| serine protease inhibitor A3N precursor [Mus mu... 278 e-109
Alignment gi|NP_001186869.1| serine (or cysteine) peptidase inhibitor, cl... 271 e-107
Alignment gi|XP_003085882.1| PREDICTED: serine protease inhibitor A3F iso... 271 e-107
Alignment gi|XP_003085883.1| PREDICTED: serine protease inhibitor A3F iso... 271 e-107
Alignment gi|NP_033277.1| serine protease inhibitor A3G [Mus musculus]. 273 e-106
Alignment gi|NP_035588.2| serine protease inhibitor A3K precursor [Mus mu... 265 e-105
Alignment gi|NP_001161766.1| serine protease inhibitor A3F [Mus musculus]. 280 e-105
Alignment gi|NP_001028507.2| serine protease inhibitor A3F [Mus musculus]. 280 e-105
>ref|NP_033279.2| serine protease inhibitor A3M precursor [Mus musculus].
Length = 418
Score = 276 bits (705), Expect(2) = e-110
Identities = 138/268 (51%), Positives = 188/268 (70%)
Frame = +1
Query: 187 CSRVHCVPADDLASKTVTLKGQITKLPAHNTAVVSSNTDFAFSLYKQLVSLDPNKNVIFS 366
C V C D + K Q + P + + S NTDFAFSLYK++ +P+KN++FS
Sbjct: 15 CPTVLCFSDDTWGIDILLHKNQESGTPDDSLTLASINTDFAFSLYKKMALKNPDKNIVFS 74
Query: 367 PLSVSIALAFLSLGARGSTLTELLEGLKFNLTKTPEAEIHQGFQHLLRALSQPSNLLQLN 546
PLS+S ALA +SLGA+G+TL E+LEGLKFNLT+T EA+IHQGF HLL+ LSQP + Q+N
Sbjct: 75 PLSISAALALVSLGAKGNTLEEILEGLKFNLTETSEADIHQGFGHLLQRLSQPEDQDQIN 134
Query: 547 VGNAMFVDERLKLLDKFVQDARELYFSEVFSISFKDSDAAVEFINNYVKNKTKGKIVDLF 726
+GNAMF+++ L++L +F + R LY +E F+ F+ A + IN+YV N+T+G I L
Sbjct: 135 IGNAMFIEKDLQILAEFHEKTRALYQTEAFTADFQQPTEATKLINDYVSNQTQGMIKKLI 194
Query: 727 KQLSPDTVLVLVNCIYFKAKWKTPFDPSFTTEADFHVSKNRTVRVPMMGISGRTLPYFRD 906
+L T++VLVN IYFK KWK FDP T E++F++ + R+V+VPMM + T +FRD
Sbjct: 195 SELDDRTLMVLVNYIYFKGKWKISFDPQDTFESEFYLDEKRSVKVPMMKMKFLTTRHFRD 254
Query: 907 EELACTVVELPYTSNDSALFILPDDGRM 990
EEL+C+V+EL YT N SALFILPD GRM
Sbjct: 255 EELSCSVLELKYTGNASALFILPDQGRM 282
Score = 142 bits (358), Expect(2) = e-110
Identities = 76/129 (58%), Positives = 90/129 (69%), Gaps = 2/129 (1%)
Frame = +3
Query: 1011 LLPETLRRWRDSLHQRRITALHLPRFSVSGDYTLHDILPHLGIKKVFSHQADLSGITDQA 1190
L PETLR+W SL R+I L+LP+FS+S DY L DILP LGIK++FS QADLSGIT
Sbjct: 289 LQPETLRKWWKSLKTRKIGELYLPKFSISTDYNLKDILPELGIKEIFSKQADLSGITGTK 348
Query: 1191 RLKVSQVVHRAVLDVDEEGTEGAAATGISIELTS--IEFLTVHFNRPFLFSIIHKDTQSI 1364
L VSQVVH+AVLDV E GTE AAATG S ++ +TV FNRPFL I H Q+
Sbjct: 349 DLSVSQVVHKAVLDVAETGTEAAAATGFIFGFRSRRLQTMTVQFNRPFLMVISHTGVQTT 408
Query: 1365 IFSGKVTDP 1391
+F KVT+P
Sbjct: 409 LFMAKVTNP 417
>ref|NP_032484.1| serine protease inhibitor A3C precursor [Mus musculus].
Length = 417
Score = 278 bits (712), Expect(2) = e-110
Identities = 141/268 (52%), Positives = 186/268 (69%)
Frame = +1
Query: 187 CSRVHCVPADDLASKTVTLKGQITKLPAHNTAVVSSNTDFAFSLYKQLVSLDPNKNVIFS 366
C V C P L T+ K + + + S NTDFAFSLYK+L +P+ N++FS
Sbjct: 15 CPGVLCFPDGTLERDTLFHKDKENGTQLDSLTLASINTDFAFSLYKKLALKNPDTNIVFS 74
Query: 367 PLSVSIALAFLSLGARGSTLTELLEGLKFNLTKTPEAEIHQGFQHLLRALSQPSNLLQLN 546
PLS+S ALA +SLGA+G+TL E+LEGL FNLT+TPEA+IHQGF HLL+ LS P +Q++
Sbjct: 75 PLSISAALAIVSLGAKGNTLEEILEGLNFNLTETPEADIHQGFGHLLQRLSHPGEQVQIS 134
Query: 547 VGNAMFVDERLKLLDKFVQDARELYFSEVFSISFKDSDAAVEFINNYVKNKTKGKIVDLF 726
G+A+FV++ L++L +F + AR LY +E F+ F+ A + IN+YV N+T+ KI L
Sbjct: 135 TGSALFVEKHLQILAEFQEKARALYQAEAFTADFQQPLEATKLINDYVSNQTQRKIKGLI 194
Query: 727 KQLSPDTVLVLVNCIYFKAKWKTPFDPSFTTEADFHVSKNRTVRVPMMGISGRTLPYFRD 906
L DT++VLVN IYFK KWK PF+P T E++F++ R+V+VPMM I T PYFRD
Sbjct: 195 SDLDTDTLMVLVNYIYFKGKWKMPFNPRDTFESEFYLDVKRSVKVPMMKIKTLTTPYFRD 254
Query: 907 EELACTVVELPYTSNDSALFILPDDGRM 990
EEL+CTVVEL Y N SALFILPD GRM
Sbjct: 255 EELSCTVVELKYKGNASALFILPDQGRM 282
Score = 139 bits (349), Expect(2) = e-110
Identities = 71/130 (54%), Positives = 94/130 (72%)
Frame = +3
Query: 1011 LLPETLRRWRDSLHQRRITALHLPRFSVSGDYTLHDILPHLGIKKVFSHQADLSGITDQA 1190
L PETLR+W++SL R++ L+LP+FS+S DY+L +ILP LGIK++FS QADLSGIT
Sbjct: 289 LQPETLRKWKNSLRPRKMGELYLPKFSISTDYSLKNILPELGIKEIFSKQADLSGITGTK 348
Query: 1191 RLKVSQVVHRAVLDVDEEGTEGAAATGISIELTSIEFLTVHFNRPFLFSIIHKDTQSIIF 1370
L VSQ+VH+AVLDV E GTEG AATG++ + S ++ FNR FL I H D Q+ +F
Sbjct: 349 DLIVSQMVHKAVLDVAETGTEGVAATGVNFRILS-RRTSLWFNRTFLMVISHTDVQTTLF 407
Query: 1371 SGKVTDPSQA 1400
K+T P +A
Sbjct: 408 IAKITHPKRA 417
>ref|NP_033278.2| serine protease inhibitor A3N precursor [Mus musculus].
Length = 418
Score = 278 bits (710), Expect(2) = e-109
Identities = 138/268 (51%), Positives = 186/268 (69%)
Frame = +1
Query: 187 CSRVHCVPADDLASKTVTLKGQITKLPAHNTAVVSSNTDFAFSLYKQLVSLDPNKNVIFS 366
C V C P L + + + S NTDFAFSLYK+LV +P+KN++FS
Sbjct: 15 CPAVLCFPDGTLGMDAAVQEDHDNGTQLDSLTLASINTDFAFSLYKELVLKNPDKNIVFS 74
Query: 367 PLSVSIALAFLSLGARGSTLTELLEGLKFNLTKTPEAEIHQGFQHLLRALSQPSNLLQLN 546
PLS+S ALA +SLGA+G+TL E+LEGLKFNLT+T EA+IHQGF HLL+ L+QP + +Q++
Sbjct: 75 PLSISAALAVMSLGAKGNTLEEILEGLKFNLTETSEADIHQGFGHLLQRLNQPKDQVQIS 134
Query: 547 VGNAMFVDERLKLLDKFVQDARELYFSEVFSISFKDSDAAVEFINNYVKNKTKGKIVDLF 726
G+A+F+++R ++L +F + AR LY +E F+ F+ A + IN+YV+ +T+G I +L
Sbjct: 135 TGSALFIEKRQQILTEFQEKARALYQAEAFTADFQQPRQAKKLINDYVRKQTQGMIKELV 194
Query: 727 KQLSPDTVLVLVNCIYFKAKWKTPFDPSFTTEADFHVSKNRTVRVPMMGISGRTLPYFRD 906
L T++VLVN IYFKAKWK PFDP T +++F+ K R V VPMM + T PYFRD
Sbjct: 195 SDLDKRTLMVLVNYIYFKAKWKVPFDPLDTFKSEFYAGKRRPVIVPMMSMEDLTTPYFRD 254
Query: 907 EELACTVVELPYTSNDSALFILPDDGRM 990
EEL CTVVEL YT N SA+FILPD G+M
Sbjct: 255 EELFCTVVELKYTGNASAMFILPDQGKM 282
Score = 136 bits (342), Expect(2) = e-109
Identities = 72/129 (55%), Positives = 90/129 (69%), Gaps = 2/129 (1%)
Frame = +3
Query: 1011 LLPETLRRWRDSLHQRRITALHLPRFSVSGDYTLHDILPHLGIKKVFSHQADLSGITDQA 1190
L PETLR+W++SL R I LHLP+FS+S DY+L D+L LGI++VFS QADLS IT
Sbjct: 289 LQPETLRKWKNSLKPRMIDELHLPKFSISTDYSLEDVLSKLGIREVFSTQADLSAITGTK 348
Query: 1191 RLKVSQVVHRAVLDVDEEGTEGAAATGISIELTSIEF--LTVHFNRPFLFSIIHKDTQSI 1364
L+VSQVVH+AVLDV E GTE AAATG+ S + LTV+FNRPFL I +T+
Sbjct: 349 DLRVSQVVHKAVLDVAETGTEAAAATGVKFVPMSAKLYPLTVYFNRPFLIMIFDTETEIA 408
Query: 1365 IFSGKVTDP 1391
F K+ +P
Sbjct: 409 PFIAKIANP 417
>ref|NP_001186869.1| serine (or cysteine) peptidase inhibitor, clade A, member 3I [Mus
musculus].
Length = 408
Score = 271 bits (693), Expect(2) = e-107
Identities = 133/236 (56%), Positives = 178/236 (75%)
Frame = +1
Query: 283 VVSSNTDFAFSLYKQLVSLDPNKNVIFSPLSVSIALAFLSLGARGSTLTELLEGLKFNLT 462
V SSNTDFAFSLY++LV +P++NV+FSP S+ ALA LSLGA+ +TL E+LEGLKFNLT
Sbjct: 37 VASSNTDFAFSLYRKLVLKNPDENVVFSPFSIFTALALLSLGAKSNTLKEILEGLKFNLT 96
Query: 463 KTPEAEIHQGFQHLLRALSQPSNLLQLNVGNAMFVDERLKLLDKFVQDARELYFSEVFSI 642
+TPE +IHQGF++LL LSQP + +Q++ G+A+FV++ L++L +F + AR LY +E F+
Sbjct: 97 ETPEPDIHQGFRYLLDLLSQPGDQVQISTGSALFVEKHLQILAEFKEKARALYQAEAFTA 156
Query: 643 SFKDSDAAVEFINNYVKNKTKGKIVDLFKQLSPDTVLVLVNCIYFKAKWKTPFDPSFTTE 822
F A + IN+YV N+T+GKI +L L T++VLVN IYFK KWK PFDP T
Sbjct: 157 DFLQPCQAKKLINDYVSNQTQGKIKELISDLDKSTLMVLVNYIYFKGKWKMPFDPRDTFN 216
Query: 823 ADFHVSKNRTVRVPMMGISGRTLPYFRDEELACTVVELPYTSNDSALFILPDDGRM 990
+ F++ + R+V+VPMM I T PYFRD+EL+C+VVEL YT N SALFILPD G+M
Sbjct: 217 SKFYLDEKRSVKVPMMKIEELTTPYFRDDELSCSVVELKYTGNASALFILPDQGKM 272
Score = 138 bits (348), Expect(2) = e-107
Identities = 72/129 (55%), Positives = 92/129 (71%), Gaps = 2/129 (1%)
Frame = +3
Query: 1011 LLPETLRRWRDSLHQRRITALHLPRFSVSGDYTLHDILPHLGIKKVFSHQADLSGITDQA 1190
L PETLR+W++SL RI+ LHLP+FS+S DY+L +LP LGI++VFS QADLS IT
Sbjct: 279 LHPETLRKWKNSLKPSRISELHLPKFSISNDYSLEHVLPVLGIREVFSMQADLSAITGTM 338
Query: 1191 RLKVSQVVHRAVLDVDEEGTEGAAATGISIELT--SIEFLTVHFNRPFLFSIIHKDTQSI 1364
L+VSQVVH+AVLDV E GTE AAATG+ + L I +T++F RPFL I +T
Sbjct: 339 DLRVSQVVHKAVLDVTETGTEAAAATGVKVNLRCGKIYSMTIYFKRPFLIIISDINTHIA 398
Query: 1365 IFSGKVTDP 1391
+F KVT+P
Sbjct: 399 LFMAKVTNP 407
>ref|XP_003085882.1| PREDICTED: serine protease inhibitor A3F isoform 1 [Mus musculus].
Length = 408
Score = 271 bits (693), Expect(2) = e-107
Identities = 133/236 (56%), Positives = 178/236 (75%)
Frame = +1
Query: 283 VVSSNTDFAFSLYKQLVSLDPNKNVIFSPLSVSIALAFLSLGARGSTLTELLEGLKFNLT 462
V SSNTDFAFSLY++LV +P++NV+FSP S+ ALA LSLGA+ +TL E+LEGLKFNLT
Sbjct: 37 VASSNTDFAFSLYRKLVLKNPDENVVFSPFSIFTALALLSLGAKSNTLKEILEGLKFNLT 96
Query: 463 KTPEAEIHQGFQHLLRALSQPSNLLQLNVGNAMFVDERLKLLDKFVQDARELYFSEVFSI 642
+TPE +IHQGF++LL LSQP + +Q++ G+A+FV++ L++L +F + AR LY +E F+
Sbjct: 97 ETPEPDIHQGFRYLLDLLSQPGDQVQISTGSALFVEKHLQILAEFKEKARALYQAEAFTA 156
Query: 643 SFKDSDAAVEFINNYVKNKTKGKIVDLFKQLSPDTVLVLVNCIYFKAKWKTPFDPSFTTE 822
F A + IN+YV N+T+GKI +L L T++VLVN IYFK KWK PFDP T
Sbjct: 157 DFLQPCQAKKLINDYVSNQTQGKIKELISDLDKSTLMVLVNYIYFKGKWKMPFDPRDTFN 216
Query: 823 ADFHVSKNRTVRVPMMGISGRTLPYFRDEELACTVVELPYTSNDSALFILPDDGRM 990
+ F++ + R+V+VPMM I T PYFRD+EL+C+VVEL YT N SALFILPD G+M
Sbjct: 217 SKFYLDEKRSVKVPMMKIEELTTPYFRDDELSCSVVELKYTGNASALFILPDQGKM 272
Score = 138 bits (347), Expect(2) = e-107
Identities = 73/129 (56%), Positives = 92/129 (71%), Gaps = 2/129 (1%)
Frame = +3
Query: 1011 LLPETLRRWRDSLHQRRITALHLPRFSVSGDYTLHDILPHLGIKKVFSHQADLSGITDQA 1190
L PETLR+W++SL RI+ LHLP+FS+S DY+L ILP LGI++VFS QADLS IT
Sbjct: 279 LHPETLRKWKNSLKPSRISELHLPKFSISNDYSLEHILPVLGIREVFSMQADLSAITGTM 338
Query: 1191 RLKVSQVVHRAVLDVDEEGTEGAAATGISIELT--SIEFLTVHFNRPFLFSIIHKDTQSI 1364
+VSQVVH+AVLDV E GTE AAATG+ + L I +T++FNRPFL I +T
Sbjct: 339 DPRVSQVVHKAVLDVAETGTEAAAATGVKVNLRCGKIYSMTIYFNRPFLMIISDINTHIA 398
Query: 1365 IFSGKVTDP 1391
+F KVT+P
Sbjct: 399 LFMAKVTNP 407
>ref|XP_003085883.1| PREDICTED: serine protease inhibitor A3F isoform 2 [Mus musculus].
Length = 408
Score = 271 bits (693), Expect(2) = e-107
Identities = 133/236 (56%), Positives = 178/236 (75%)
Frame = +1
Query: 283 VVSSNTDFAFSLYKQLVSLDPNKNVIFSPLSVSIALAFLSLGARGSTLTELLEGLKFNLT 462
V SSNTDFAFSLY++LV +P++NV+FSP S+ ALA LSLGA+ +TL E+LEGLKFNLT
Sbjct: 37 VASSNTDFAFSLYRKLVLKNPDENVVFSPFSIFTALALLSLGAKSNTLKEILEGLKFNLT 96
Query: 463 KTPEAEIHQGFQHLLRALSQPSNLLQLNVGNAMFVDERLKLLDKFVQDARELYFSEVFSI 642
+TPE +IHQGF++LL LSQP + +Q++ G+A+FV++ L++L +F + AR LY +E F+
Sbjct: 97 ETPEPDIHQGFRYLLDLLSQPGDQVQISTGSALFVEKHLQILAEFKEKARALYQAEAFTA 156
Query: 643 SFKDSDAAVEFINNYVKNKTKGKIVDLFKQLSPDTVLVLVNCIYFKAKWKTPFDPSFTTE 822
F A + IN+YV N+T+GKI +L L T++VLVN IYFK KWK PFDP T
Sbjct: 157 DFLQPCQAKKLINDYVSNQTQGKIKELISDLDKSTLMVLVNYIYFKGKWKMPFDPRDTFN 216
Query: 823 ADFHVSKNRTVRVPMMGISGRTLPYFRDEELACTVVELPYTSNDSALFILPDDGRM 990
+ F++ + R+V+VPMM I T PYFRD+EL+C+VVEL YT N SALFILPD G+M
Sbjct: 217 SKFYLDEKRSVKVPMMKIEELTTPYFRDDELSCSVVELKYTGNASALFILPDQGKM 272
Score = 138 bits (347), Expect(2) = e-107
Identities = 73/129 (56%), Positives = 92/129 (71%), Gaps = 2/129 (1%)
Frame = +3
Query: 1011 LLPETLRRWRDSLHQRRITALHLPRFSVSGDYTLHDILPHLGIKKVFSHQADLSGITDQA 1190
L PETLR+W++SL RI+ LHLP+FS+S DY+L ILP LGI++VFS QADLS IT
Sbjct: 279 LHPETLRKWKNSLKPSRISELHLPKFSISNDYSLEHILPVLGIREVFSMQADLSAITGTM 338
Query: 1191 RLKVSQVVHRAVLDVDEEGTEGAAATGISIELT--SIEFLTVHFNRPFLFSIIHKDTQSI 1364
+VSQVVH+AVLDV E GTE AAATG+ + L I +T++FNRPFL I +T
Sbjct: 339 DPRVSQVVHKAVLDVAETGTEAAAATGVKVNLRCGKIYSMTIYFNRPFLMIISDINTHIA 398
Query: 1365 IFSGKVTDP 1391
+F KVT+P
Sbjct: 399 LFMAKVTNP 407
>ref|NP_033277.1| serine protease inhibitor A3G [Mus musculus].
Length = 440
Score = 273 bits (697), Expect(2) = e-106
Identities = 137/261 (52%), Positives = 185/261 (70%)
Frame = +1
Query: 208 PADDLASKTVTLKGQITKLPAHNTAVVSSNTDFAFSLYKQLVSLDPNKNVIFSPLSVSIA 387
P L T + Q + +VSSNTDFAFSLY++LV +P++NV+FSP S+ A
Sbjct: 12 PDVTLGRNTAVREVQENVTSVDSLTLVSSNTDFAFSLYRKLVLKNPDENVVFSPFSICTA 71
Query: 388 LAFLSLGARGSTLTELLEGLKFNLTKTPEAEIHQGFQHLLRALSQPSNLLQLNVGNAMFV 567
LA LSLGA+ +TL E+LEGLKFNLT+TPE +IHQGF++LL LSQP N +Q++ G+A+F+
Sbjct: 72 LALLSLGAKSNTLKEILEGLKFNLTETPEPDIHQGFRYLLDLLSQPGNQVQISTGSALFI 131
Query: 568 DERLKLLDKFVQDARELYFSEVFSISFKDSDAAVEFINNYVKNKTKGKIVDLFKQLSPDT 747
++ L++L +F + AR LY +E F+ F+ A + IN+YV N T+GKI +L L T
Sbjct: 132 EKHLQILAEFKEKARALYQAEAFTADFQQPLKATKLINDYVSNHTQGKIKELISGLKEST 191
Query: 748 VLVLVNCIYFKAKWKTPFDPSFTTEADFHVSKNRTVRVPMMGISGRTLPYFRDEELACTV 927
++VLVN IYFK KWK PFDP+ T +++F++ + R+V V MM T PYFRDEEL+CTV
Sbjct: 192 LMVLVNYIYFKGKWKNPFDPNDTFKSEFYLDEKRSVIVSMMKTGYLTTPYFRDEELSCTV 251
Query: 928 VELPYTSNDSALFILPDDGRM 990
VEL YT N SA+FILPD GRM
Sbjct: 252 VELKYTGNASAMFILPDQGRM 272
Score = 131 bits (330), Expect(2) = e-106
Identities = 72/136 (52%), Positives = 94/136 (69%), Gaps = 2/136 (1%)
Frame = +3
Query: 1011 LLPETLRRWRDSLHQRRITALHLPRFSVSGDYTLHDILPHLGIKKVFSHQADLSGITDQA 1190
L PETLR+W++SL R I L LP+FS+S DY+L ILP LGI++VFS QADLS IT
Sbjct: 279 LQPETLRKWKNSLKPRMIHELRLPKFSISTDYSLEHILPELGIREVFSTQADLSAITGTK 338
Query: 1191 RLKVSQVVHRAVLDVDEEGTEGAAATGIS-IELTSI-EFLTVHFNRPFLFSIIHKDTQSI 1364
L+VSQVVH+AVLDV E GTE AAATG++ + ++ +FL + FNRPFL I
Sbjct: 339 DLRVSQVVHKAVLDVAETGTEAAAATGMAGVGCCAVFDFLEIFFNRPFLMIISDTKAHIA 398
Query: 1365 IFSGKVTDPSQA*SSP 1412
+F KVT+P ++ + P
Sbjct: 399 LFMAKVTNPERSMNFP 414
>ref|NP_035588.2| serine protease inhibitor A3K precursor [Mus musculus].
Length = 418
Score = 265 bits (678), Expect(2) = e-105
Identities = 135/268 (50%), Positives = 184/268 (68%)
Frame = +1
Query: 187 CSRVHCVPADDLASKTVTLKGQITKLPAHNTAVVSSNTDFAFSLYKQLVSLDPNKNVIFS 366
C V C P V + Q + + S NTDFAFSLYK+L + +KN++FS
Sbjct: 16 CPAVLCFPDGTKEMDIVFHEHQDNGTQDDSLTLASVNTDFAFSLYKKLALKNQDKNIVFS 75
Query: 367 PLSVSIALAFLSLGARGSTLTELLEGLKFNLTKTPEAEIHQGFQHLLRALSQPSNLLQLN 546
PLS+S ALA +SLGA+G T+ E+LEGLKFNLT+TPEA+IHQGF +LL++LSQP + Q+N
Sbjct: 76 PLSISAALALVSLGAKGKTMEEILEGLKFNLTETPEADIHQGFGNLLQSLSQPEDQDQIN 135
Query: 547 VGNAMFVDERLKLLDKFVQDARELYFSEVFSISFKDSDAAVEFINNYVKNKTKGKIVDLF 726
+GNAMF+++ L++L +F + R LY +E F+ F+ A IN+YV N+T+G I L
Sbjct: 136 IGNAMFIEKDLQILAEFHEKTRALYQTEAFTADFQQPTEAKNLINDYVSNQTQGMIKKLI 195
Query: 727 KQLSPDTVLVLVNCIYFKAKWKTPFDPSFTTEADFHVSKNRTVRVPMMGISGRTLPYFRD 906
+L T++VLVN IYFK KWK FDP T E++F++ + R+V+VPMM + T +FRD
Sbjct: 196 SELDDGTLMVLVNYIYFKGKWKISFDPQDTFESEFYLDEKRSVKVPMMKMKLLTARHFRD 255
Query: 907 EELACTVVELPYTSNDSALFILPDDGRM 990
EEL+C+V+EL YT N SAL ILPD GRM
Sbjct: 256 EELSCSVLELKYTGNASALLILPDQGRM 283
Score = 137 bits (344), Expect(2) = e-105
Identities = 71/128 (55%), Positives = 89/128 (69%), Gaps = 1/128 (0%)
Frame = +3
Query: 1011 LLPETLRRWRDSLHQRRITALHLPRFSVSGDYTLH-DILPHLGIKKVFSHQADLSGITDQ 1187
L PETLR+WR +L +I L+LP+FS++ DY L D+LP +GIK+VF+ QADLSGIT+
Sbjct: 290 LQPETLRKWRKTLFSSQIEELNLPKFSIASDYRLEEDVLPEMGIKEVFTEQADLSGITEA 349
Query: 1188 ARLKVSQVVHRAVLDVDEEGTEGAAATGISIELTSIEFLTVHFNRPFLFSIIHKDTQSII 1367
+L VSQVVH+AVLDV E GTE AAATG+ + V FNRPFL I H QSI+
Sbjct: 350 KKLSVSQVVHKAVLDVAETGTEAAAATGVIGGIRKAVLPAVCFNRPFLIVIYHTSAQSIL 409
Query: 1368 FSGKVTDP 1391
F KV +P
Sbjct: 410 FMAKVNNP 417
>ref|NP_001161766.1| serine protease inhibitor A3F [Mus musculus].
Length = 445
Score = 280 bits (716), Expect(2) = e-105
Identities = 138/261 (52%), Positives = 188/261 (72%)
Frame = +1
Query: 208 PADDLASKTVTLKGQITKLPAHNTAVVSSNTDFAFSLYKQLVSLDPNKNVIFSPLSVSIA 387
P L T + Q + + SSNTDFAFSLYK+LV +P++NV+FSP S+ A
Sbjct: 12 PDVTLGRNTAVREVQENITSVDSLTLASSNTDFAFSLYKELVLKNPDENVVFSPFSICTA 71
Query: 388 LAFLSLGARGSTLTELLEGLKFNLTKTPEAEIHQGFQHLLRALSQPSNLLQLNVGNAMFV 567
LA LSLGA+ +TL E+LEGLKFNLT+TPE +IHQGF++LL LSQP N +Q++ G+A+F+
Sbjct: 72 LALLSLGAKSNTLKEILEGLKFNLTETPEPDIHQGFRYLLDLLSQPGNQVQISTGSALFI 131
Query: 568 DERLKLLDKFVQDARELYFSEVFSISFKDSDAAVEFINNYVKNKTKGKIVDLFKQLSPDT 747
++ L++L +F + AR LY +E F+ F+ A + IN+YV N T+GKI +L L T
Sbjct: 132 EKHLQILAEFKEKARALYQAEAFTADFQQPLEATKLINDYVSNHTQGKIKELISDLDKRT 191
Query: 748 VLVLVNCIYFKAKWKTPFDPSFTTEADFHVSKNRTVRVPMMGISGRTLPYFRDEELACTV 927
++VLVN IYFK KW+ PFDP T +++F++ +NR+V+VPMM I+ T PYFRDEEL+CTV
Sbjct: 192 LMVLVNYIYFKGKWEMPFDPDDTCKSEFYLDENRSVKVPMMKINNLTTPYFRDEELSCTV 251
Query: 928 VELPYTSNDSALFILPDDGRM 990
VEL YT N SA+FILPD G+M
Sbjct: 252 VELKYTGNASAMFILPDQGKM 272
Score = 121 bits (303), Expect(2) = e-105
Identities = 67/130 (51%), Positives = 85/130 (65%), Gaps = 3/130 (2%)
Frame = +3
Query: 1011 LLPETLRRWRDSLHQRRITALHLPRFSVSGDYTLHDILPHLGIKKVFSHQADLSGITDQA 1190
L PETLR W+DSL R I L LP+FS+S DY+L ILP LGI+++FS QADLS IT
Sbjct: 279 LQPETLRNWKDSLKPRLINELCLPKFSISTDYSLEHILPELGIRELFSTQADLSAITGTK 338
Query: 1191 RLKVSQVVHRAVLDVDEEGTEGAAATG---ISIELTSIEFLTVHFNRPFLFSIIHKDTQS 1361
L+ SQVVH+AVLDV E GTE AA TG + I + ++F+RPFL I +T
Sbjct: 339 DLRTSQVVHKAVLDVAETGTEAAAGTGYQNLQCCQGVIYSMKIYFDRPFLMIISDTNTHI 398
Query: 1362 IIFSGKVTDP 1391
+F KV++P
Sbjct: 399 ALFMAKVSNP 408
>ref|NP_001028507.2| serine protease inhibitor A3F [Mus musculus].
Length = 445
Score = 280 bits (716), Expect(2) = e-105
Identities = 138/261 (52%), Positives = 188/261 (72%)
Frame = +1
Query: 208 PADDLASKTVTLKGQITKLPAHNTAVVSSNTDFAFSLYKQLVSLDPNKNVIFSPLSVSIA 387
P L T + Q + + SSNTDFAFSLYK+LV +P++NV+FSP S+ A
Sbjct: 12 PDVTLGRNTAVREVQENITSVDSLTLASSNTDFAFSLYKELVLKNPDENVVFSPFSICTA 71
Query: 388 LAFLSLGARGSTLTELLEGLKFNLTKTPEAEIHQGFQHLLRALSQPSNLLQLNVGNAMFV 567
LA LSLGA+ +TL E+LEGLKFNLT+TPE +IHQGF++LL LSQP N +Q++ G+A+F+
Sbjct: 72 LALLSLGAKSNTLKEILEGLKFNLTETPEPDIHQGFRYLLDLLSQPGNQVQISTGSALFI 131
Query: 568 DERLKLLDKFVQDARELYFSEVFSISFKDSDAAVEFINNYVKNKTKGKIVDLFKQLSPDT 747
++ L++L +F + AR LY +E F+ F+ A + IN+YV N T+GKI +L L T
Sbjct: 132 EKHLQILAEFKEKARALYQAEAFTADFQQPLEATKLINDYVSNHTQGKIKELISDLDKRT 191
Query: 748 VLVLVNCIYFKAKWKTPFDPSFTTEADFHVSKNRTVRVPMMGISGRTLPYFRDEELACTV 927
++VLVN IYFK KW+ PFDP T +++F++ +NR+V+VPMM I+ T PYFRDEEL+CTV
Sbjct: 192 LMVLVNYIYFKGKWEMPFDPDDTCKSEFYLDENRSVKVPMMKINNLTTPYFRDEELSCTV 251
Query: 928 VELPYTSNDSALFILPDDGRM 990
VEL YT N SA+FILPD G+M
Sbjct: 252 VELKYTGNASAMFILPDQGKM 272
Score = 121 bits (303), Expect(2) = e-105
Identities = 67/130 (51%), Positives = 85/130 (65%), Gaps = 3/130 (2%)
Frame = +3
Query: 1011 LLPETLRRWRDSLHQRRITALHLPRFSVSGDYTLHDILPHLGIKKVFSHQADLSGITDQA 1190
L PETLR W+DSL R I L LP+FS+S DY+L ILP LGI+++FS QADLS IT
Sbjct: 279 LQPETLRNWKDSLKPRLINELCLPKFSISTDYSLEHILPELGIRELFSTQADLSAITGTK 338
Query: 1191 RLKVSQVVHRAVLDVDEEGTEGAAATG---ISIELTSIEFLTVHFNRPFLFSIIHKDTQS 1361
L+ SQVVH+AVLDV E GTE AA TG + I + ++F+RPFL I +T
Sbjct: 339 DLRTSQVVHKAVLDVAETGTEAAAGTGYQNLQCCQGVIYSMKIYFDRPFLMIISDTNTHI 398
Query: 1362 IIFSGKVTDP 1391
+F KV++P
Sbjct: 399 ALFMAKVSNP 408
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 48,801,894
Number of extensions: 1401410
Number of successful extensions: 7595
Number of sequences better than 1.0e-05: 82
Number of HSP's gapped: 7309
Number of HSP's successfully gapped: 160
Length of query: 481
Length of database: 15,617,559
Length adjustment: 105
Effective length of query: 376
Effective length of database: 12,463,779
Effective search space: 4686380904
Effective search space used: 4686380904
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-000771
(1445 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_001928857.3| PREDICTED: serpin A3-8 [Sus scrofa]. 542 0.0
Alignment gi|XP_001928879.1| PREDICTED: serpin A3-6 [Sus scrofa]. 466 e-177
Alignment gi|NP_998952.1| alpha-1-antichymotrypsin 2 [Sus scrofa]. 437 e-167
Alignment gi|XP_001928637.3| PREDICTED: serpin A3-5 [Sus scrofa]. 427 e-142
Alignment gi|NP_999560.1| alpha-1-antitrypsin precursor [Sus scrofa]. 233 2e-86
Alignment gi|XP_003356835.1| PREDICTED: serpin A11 [Sus scrofa]. 213 6e-85
Alignment gi|XP_003356842.1| PREDICTED: serpin A3-6 [Sus scrofa]. 310 1e-84
Alignment gi|XP_001928507.1| PREDICTED: serpin A11 [Sus scrofa]. 213 1e-84
Alignment gi|XP_001928604.1| PREDICTED: plasma serine protease inhibitor-... 216 1e-83
Alignment gi|XP_003356840.1| PREDICTED: LOW QUALITY PROTEIN: kallistatin-... 211 2e-82
>ref|XP_001928857.3| PREDICTED: serpin A3-8 [Sus scrofa].
Length = 423
Score = 542 bits (1397), Expect(2) = 0.0
Identities = 277/289 (95%), Positives = 277/289 (95%)
Frame = +1
Query: 130 MRAEGMSXXXXXXXXXXXXCSRVHCVPADDLASKTVTLKGQITKLPAHNTAVVSSNTDFA 309
MRAEGMS CSRVHCVPADDLASKTVTLKGQITKLPAHNTAVVSSNTDFA
Sbjct: 1 MRAEGMSLFLALGLLVAGLCSRVHCVPADDLASKTVTLKGQITKLPAHNTAVVSSNTDFA 60
Query: 310 FSLYKQLVSLDPNKNVIFSPLSVSIALAFLSLGARGSTLTELLEGLKFNLTKTPEAEIHQ 489
FSLYKQLVSLDPNKNVIFSPLSVSIALAFLSLGARGSTLTELLEGLKFNLTKTPEAEIHQ
Sbjct: 61 FSLYKQLVSLDPNKNVIFSPLSVSIALAFLSLGARGSTLTELLEGLKFNLTKTPEAEIHQ 120
Query: 490 GFQHLLRALSQPSNLLQLNVGNAMFVDERLKLLDKFVQDARELYFSEVFSISFKDSDAAV 669
GFQHLLRALSQPSNLLQLNVGNAMFVDERLKLLDKFVQDARELYFSEVFSISFKDSDAAV
Sbjct: 121 GFQHLLRALSQPSNLLQLNVGNAMFVDERLKLLDKFVQDARELYFSEVFSISFKDSDAAV 180
Query: 670 EFINNYVKNKTKGKIVDLFKQLSPDTVLVLVNCIYFKAKWKTPFDPSFTTEADFHVSKNR 849
EFINNYVKNKTKGKIVDLFKQLSPDTVLVLVNCIYFKAKWKTPFDPSFTTEADFHVSKNR
Sbjct: 181 EFINNYVKNKTKGKIVDLFKQLSPDTVLVLVNCIYFKAKWKTPFDPSFTTEADFHVSKNR 240
Query: 850 TVRVPMMGISGRTLPYFRDEELACTVVELPYTSNDSALFILPDDGRMAA 996
TVRVPMMGISGRTLPYFRDEELACTVVELPYTSNDSALFILPDDGRMAA
Sbjct: 241 TVRVPMMGISGRTLPYFRDEELACTVVELPYTSNDSALFILPDDGRMAA 289
Score = 261 bits (666), Expect(2) = 0.0
Identities = 131/131 (100%), Positives = 131/131 (100%)
Frame = +3
Query: 1008 QLLPETLRRWRDSLHQRRITALHLPRFSVSGDYTLHDILPHLGIKKVFSHQADLSGITDQ 1187
QLLPETLRRWRDSLHQRRITALHLPRFSVSGDYTLHDILPHLGIKKVFSHQADLSGITDQ
Sbjct: 293 QLLPETLRRWRDSLHQRRITALHLPRFSVSGDYTLHDILPHLGIKKVFSHQADLSGITDQ 352
Query: 1188 ARLKVSQVVHRAVLDVDEEGTEGAAATGISIELTSIEFLTVHFNRPFLFSIIHKDTQSII 1367
ARLKVSQVVHRAVLDVDEEGTEGAAATGISIELTSIEFLTVHFNRPFLFSIIHKDTQSII
Sbjct: 353 ARLKVSQVVHRAVLDVDEEGTEGAAATGISIELTSIEFLTVHFNRPFLFSIIHKDTQSII 412
Query: 1368 FSGKVTDPSQA 1400
FSGKVTDPSQA
Sbjct: 413 FSGKVTDPSQA 423
>ref|XP_001928879.1| PREDICTED: serpin A3-6 [Sus scrofa].
Length = 423
Score = 466 bits (1200), Expect(2) = e-177
Identities = 239/289 (82%), Positives = 255/289 (88%)
Frame = +1
Query: 130 MRAEGMSXXXXXXXXXXXXCSRVHCVPADDLASKTVTLKGQITKLPAHNTAVVSSNTDFA 309
MRAEGMS CSRVHCVPADDLASK VTLKGQITKLPAHNTAVVSSNTDFA
Sbjct: 1 MRAEGMSLFLALGLLVAGLCSRVHCVPADDLASKIVTLKGQITKLPAHNTAVVSSNTDFA 60
Query: 310 FSLYKQLVSLDPNKNVIFSPLSVSIALAFLSLGARGSTLTELLEGLKFNLTKTPEAEIHQ 489
FSLYKQLVSLDP+KNVIFSPLSVSIALAFLSLGA+GSTLTELLEGLKFNLTKTPEAEIHQ
Sbjct: 61 FSLYKQLVSLDPSKNVIFSPLSVSIALAFLSLGAQGSTLTELLEGLKFNLTKTPEAEIHQ 120
Query: 490 GFQHLLRALSQPSNLLQLNVGNAMFVDERLKLLDKFVQDARELYFSEVFSISFKDSDAAV 669
GFQHLL+ALSQPSNLLQLNVGNAMFVDE LKLLDKFVQDARELY SE F +F+D +AA
Sbjct: 121 GFQHLLQALSQPSNLLQLNVGNAMFVDEHLKLLDKFVQDARELYHSEAFPTNFQDLEAAR 180
Query: 670 EFINNYVKNKTKGKIVDLFKQLSPDTVLVLVNCIYFKAKWKTPFDPSFTTEADFHVSKNR 849
IN+YVKNKT+GKIV+L K+L P TV VLVN IYFKA+W T FDP+ TTEADF+VSKN+
Sbjct: 181 RLINDYVKNKTEGKIVELIKKLFPRTVAVLVNYIYFKAQWMTHFDPNLTTEADFYVSKNK 240
Query: 850 TVRVPMMGISGRTLPYFRDEELACTVVELPYTSNDSALFILPDDGRMAA 996
TV+VPMMGI T+PYFRDEELACTVVELPYTSNDS LFILPDDGRMAA
Sbjct: 241 TVKVPMMGIKNLTVPYFRDEELACTVVELPYTSNDSTLFILPDDGRMAA 289
Score = 173 bits (439), Expect(2) = e-177
Identities = 89/130 (68%), Positives = 101/130 (77%)
Frame = +3
Query: 1011 LLPETLRRWRDSLHQRRITALHLPRFSVSGDYTLHDILPHLGIKKVFSHQADLSGITDQA 1190
LLPE LRRWRDSL RRI ALHLPRFS+S DY L +ILP LGIK++FS +ADLSGITD
Sbjct: 294 LLPEMLRRWRDSLQPRRIDALHLPRFSISSDYKLEEILPRLGIKEIFSAEADLSGITDTK 353
Query: 1191 RLKVSQVVHRAVLDVDEEGTEGAAATGISIELTSIEFLTVHFNRPFLFSIIHKDTQSIIF 1370
L VSQVVH AVLDVDEEGTEGAA+TG+ IE S E V F+ PFLF+ + +DTQSIIF
Sbjct: 354 PLYVSQVVHSAVLDVDEEGTEGAASTGVVIERKSFENFIVRFDSPFLFATVLRDTQSIIF 413
Query: 1371 SGKVTDPSQA 1400
GKV +P A
Sbjct: 414 LGKVVNPHPA 423
>ref|NP_998952.1| alpha-1-antichymotrypsin 2 [Sus scrofa].
Length = 415
Score = 437 bits (1125), Expect(2) = e-167
Identities = 221/270 (81%), Positives = 240/270 (88%)
Frame = +1
Query: 187 CSRVHCVPADDLASKTVTLKGQITKLPAHNTAVVSSNTDFAFSLYKQLVSLDPNKNVIFS 366
CSRVHCVPADD ASK VTLK QI KLPAHNTAVVSSNTDFAFSLYKQL +P++NVIFS
Sbjct: 15 CSRVHCVPADDPASKIVTLKDQIKKLPAHNTAVVSSNTDFAFSLYKQLALTNPHENVIFS 74
Query: 367 PLSVSIALAFLSLGARGSTLTELLEGLKFNLTKTPEAEIHQGFQHLLRALSQPSNLLQLN 546
PLSVS+ALAFLSLGARG TLTELLEGLKFNLTKTPEAEIHQGFQHLL L + SNLLQL
Sbjct: 75 PLSVSMALAFLSLGARGPTLTELLEGLKFNLTKTPEAEIHQGFQHLLSTLDRSSNLLQLR 134
Query: 547 VGNAMFVDERLKLLDKFVQDARELYFSEVFSISFKDSDAAVEFINNYVKNKTKGKIVDLF 726
+GNAMF+DE+L+LLDKFVQDA ELY SE F +F+D +AA IN+YVKNKT+GKIVDLF
Sbjct: 135 LGNAMFIDEQLELLDKFVQDAHELYHSEAFPTNFQDLEAARRLINDYVKNKTEGKIVDLF 194
Query: 727 KQLSPDTVLVLVNCIYFKAKWKTPFDPSFTTEADFHVSKNRTVRVPMMGISGRTLPYFRD 906
K+L P T +VLVN IYFKAKWKTPF+P+ TTEADFHVSKNRTVRVPMMGI T+PYFRD
Sbjct: 195 KKLDPLTKVVLVNYIYFKAKWKTPFNPNLTTEADFHVSKNRTVRVPMMGIRALTVPYFRD 254
Query: 907 EELACTVVELPYTSNDSALFILPDDGRMAA 996
EELACTVVELPYTSNDSALFILPDDGRMAA
Sbjct: 255 EELACTVVELPYTSNDSALFILPDDGRMAA 284
Score = 171 bits (432), Expect(2) = e-167
Identities = 86/128 (67%), Positives = 101/128 (78%)
Frame = +3
Query: 1008 QLLPETLRRWRDSLHQRRITALHLPRFSVSGDYTLHDILPHLGIKKVFSHQADLSGITDQ 1187
+LLPETLRRWRD L R I L+LP+FS+S DY LH+ILP LGI+++F A+LSGIT+
Sbjct: 288 KLLPETLRRWRDFLQPRWIVELYLPKFSISSDYRLHEILPQLGIEEIFGDNANLSGITNT 347
Query: 1188 ARLKVSQVVHRAVLDVDEEGTEGAAATGISIELTSIEFLTVHFNRPFLFSIIHKDTQSII 1367
LKVSQVVH AVLDV+EEGTE AAATGI I + S+E + +HFNRPFLF II KD QSII
Sbjct: 348 KPLKVSQVVHSAVLDVNEEGTEAAAATGIDINVRSLERIALHFNRPFLFVIISKDIQSII 407
Query: 1368 FSGKVTDP 1391
F GKVT P
Sbjct: 408 FLGKVTKP 415
>ref|XP_001928637.3| PREDICTED: serpin A3-5 [Sus scrofa].
Length = 393
Score = 427 bits (1097), Expect(2) = e-142
Identities = 226/309 (73%), Positives = 245/309 (79%)
Frame = +1
Query: 70 ALRAGGGSGSTQRIPLCEADMRAEGMSXXXXXXXXXXXXCSRVHCVPADDLASKTVTLKG 249
ALRAGGGSGSTQRI LCEA ADD ASK VTLK
Sbjct: 40 ALRAGGGSGSTQRILLCEA----------------------------ADDPASKIVTLKD 71
Query: 250 QITKLPAHNTAVVSSNTDFAFSLYKQLVSLDPNKNVIFSPLSVSIALAFLSLGARGSTLT 429
QI KLPAHNTAVVSSNTDFAFSLYKQL +P++NVIFSPLSVS+ALAFLSLGARG TLT
Sbjct: 72 QIRKLPAHNTAVVSSNTDFAFSLYKQLALTNPHENVIFSPLSVSMALAFLSLGARGPTLT 131
Query: 430 ELLEGLKFNLTKTPEAEIHQGFQHLLRALSQPSNLLQLNVGNAMFVDERLKLLDKFVQDA 609
ELLEGLKFNLTKTPEAEIHQGFQHLL L + SNLLQL +GNAMF+DE+L+LLDKFVQDA
Sbjct: 132 ELLEGLKFNLTKTPEAEIHQGFQHLLSTLDRSSNLLQLRLGNAMFIDEQLELLDKFVQDA 191
Query: 610 RELYFSEVFSISFKDSDAAVEFINNYVKNKTKGKIVDLFKQLSPDTVLVLVNCIYFKAKW 789
ELY SE F +F+D +AA IN+YVKNKT+GKIVDLFK+L P T +VLVN IYFKAKW
Sbjct: 192 HELYHSEAFPTNFQDLEAARRLINDYVKNKTEGKIVDLFKKLDPLTKVVLVNYIYFKAKW 251
Query: 790 KTPFDPSFTTEADFHVSKNRTVRVPMMGISGRTLPYFRDEELACTVVELPYTSNDSALFI 969
KTPFDP T E+ FHVSKNRTV+VPMM + G PYFRDEELACTVVELPYTSNDSALFI
Sbjct: 252 KTPFDPEHTIESTFHVSKNRTVKVPMMSLRGLETPYFRDEELACTVVELPYTSNDSALFI 311
Query: 970 LPDDGRMAA 996
LPDDGRMAA
Sbjct: 312 LPDDGRMAA 320
Score = 97.8 bits (242), Expect(2) = e-142
Identities = 48/68 (70%), Positives = 56/68 (82%)
Frame = +3
Query: 1008 QLLPETLRRWRDSLHQRRITALHLPRFSVSGDYTLHDILPHLGIKKVFSHQADLSGITDQ 1187
+LLPETLRRWRDSL RRI AL+LPRFSVSGDY L D L LGI+KVF+H+ADLSG+T
Sbjct: 324 KLLPETLRRWRDSLQPRRIDALYLPRFSVSGDYQLKDTLKQLGIQKVFTHEADLSGVTGD 383
Query: 1188 ARLKVSQV 1211
+L VS+V
Sbjct: 384 NKLGVSKV 391
>ref|NP_999560.1| alpha-1-antitrypsin precursor [Sus scrofa].
Length = 421
Score = 233 bits (593), Expect(2) = 2e-86
Identities = 114/230 (49%), Positives = 159/230 (69%)
Frame = +1
Query: 301 DFAFSLYKQLVSLDPNKNVIFSPLSVSIALAFLSLGARGSTLTELLEGLKFNLTKTPEAE 480
DFAFSLY+Q+ N+ SP++++ A A LSLG +G+T E+LEGL+FNLT+ EAE
Sbjct: 59 DFAFSLYRQVARQSNTSNIFLSPVTIARAFAMLSLGTKGATHAEILEGLQFNLTEKAEAE 118
Query: 481 IHQGFQHLLRALSQPSNLLQLNVGNAMFVDERLKLLDKFVQDARELYFSEVFSISFKDSD 660
IH+GFQHLL L+QP N LQL GN +F+DE+ KL+ KF++D + LY SE FSI+F+D++
Sbjct: 119 IHEGFQHLLHTLNQPDNQLQLTTGNGLFIDEKAKLVPKFLEDVKNLYHSEAFSINFRDTE 178
Query: 661 AAVEFINNYVKNKTKGKIVDLFKQLSPDTVLVLVNCIYFKAKWKTPFDPSFTTEADFHVS 840
A + IN+YV+ ++GKIVDL +L DTV LVN I+FK KW+ PF+ TTE DFHV
Sbjct: 179 EAKKCINDYVEKGSQGKIVDLVDELDKDTVFALVNYIFFKGKWEKPFEVEQTTEEDFHVD 238
Query: 841 KNRTVRVPMMGISGRTLPYFRDEELACTVVELPYTSNDSALFILPDDGRM 990
+ TV+VPMM G ++L+ V+ + Y + +A FILPD G++
Sbjct: 239 EETTVKVPMMNRLG-MFDLHHCDKLSSWVLLMDYVATATAFFILPDQGKL 287
Score = 105 bits (263), Expect(2) = 2e-86
Identities = 54/109 (49%), Positives = 76/109 (69%)
Frame = +3
Query: 1071 LHLPRFSVSGDYTLHDILPHLGIKKVFSHQADLSGITDQARLKVSQVVHRAVLDVDEEGT 1250
LHLP+ ++SG Y L +L +LGI KVFS +ADLSG+T++ LK+S+ +HRAVL +DE+GT
Sbjct: 313 LHLPKLTISGTYDLKSLLGNLGITKVFSDEADLSGVTEEQPLKLSKALHRAVLTIDEKGT 372
Query: 1251 EGAAATGISIELTSIEFLTVHFNRPFLFSIIHKDTQSIIFSGKVTDPSQ 1397
E AT + SI V FN+PFLF I T++++F GKV +P+Q
Sbjct: 373 EATGATILEAIPMSIP-PNVKFNKPFLFLIYDTKTKAVLFMGKVMNPTQ 420
>ref|XP_003356835.1| PREDICTED: serpin A11 [Sus scrofa].
Length = 422
Score = 213 bits (543), Expect(2) = 6e-85
Identities = 112/244 (45%), Positives = 166/244 (68%), Gaps = 1/244 (0%)
Frame = +1
Query: 265 PAHNTAVVSSNTDFAFSLYKQLVSLDPNKNVIFSPLSVSIALAFLSLGARGSTLTELLEG 444
PA++ + + TDFA LYKQL + P N+ FSP+S+S LA LSLGA+ T T++LEG
Sbjct: 45 PAYHK-ITPTLTDFALRLYKQLAAETPG-NIFFSPVSISSTLALLSLGAQADTPTQILEG 102
Query: 445 LKFNLTKTPEAEIHQGFQHLLRALSQPSNLLQLNVGNAMFVDERLKLLDKFVQDARELYF 624
L FNLT+ PEA+IH+GFQ L+R L PS+ L++ VGN++F+D++LK F+ + RE+Y
Sbjct: 103 LGFNLTEIPEADIHRGFQSLIRTLGLPSSKLEMKVGNSLFLDKQLKPQQHFLDNIREVYG 162
Query: 625 SEVFSISFKDSDAAVEFINNYVKNKTKGKIVDLFKQLSPDTVLVLVNCIYFKAKWKTPFD 804
+ FS +F DS IN+Y++ +T G++VD ++ + DT++VL+N I+FKAKWK PF+
Sbjct: 163 ALAFSANFTDSGTTRRQINDYLRKQTYGQVVDCLEEFAQDTLMVLLNYIFFKAKWKHPFN 222
Query: 805 PSFTTEAD-FHVSKNRTVRVPMMGISGRTLPYFRDEELACTVVELPYTSNDSALFILPDD 981
P T + + F V + ++RVPMM + D E+ACTV+++ Y+ N AL ILPD
Sbjct: 223 PYQTQKQESFFVDERTSLRVPMMR-QKEMHRFLYDHEVACTVLQIEYSGNAQALLILPDP 281
Query: 982 GRMA 993
G+MA
Sbjct: 282 GKMA 285
Score = 120 bits (300), Expect(2) = 6e-85
Identities = 64/131 (48%), Positives = 86/131 (65%), Gaps = 3/131 (2%)
Frame = +3
Query: 1011 LLPETLRRWRDSLHQRRITALHLPRFSVSGDYTLHDILPHLGIKKVFSHQADLSGITDQA 1190
L PETLR+W D L + LHLPRFS+SG Y L +ILP +G+ +FS +ADLSGIT Q
Sbjct: 291 LQPETLRKW-DQLLLPSLLDLHLPRFSISGTYNLEEILPRIGLTNLFSLEADLSGITGQL 349
Query: 1191 RLKVSQVVHRAVLDVDEEGTEGAAATGISIELTSIEFLT---VHFNRPFLFSIIHKDTQS 1361
VS+V H+A +D+ E GTE AAA+G+ + S+ + HFNRPFL + TQS
Sbjct: 350 NRTVSRVSHKAAVDMSERGTEAAAASGLLSQPQSLNTTSAPHAHFNRPFLVLLWEVTTQS 409
Query: 1362 IIFSGKVTDPS 1394
++F GKV +P+
Sbjct: 410 LLFLGKVVNPA 420
>ref|XP_003356842.1| PREDICTED: serpin A3-6 [Sus scrofa].
Length = 345
Score = 310 bits (795), Expect = 1e-84
Identities = 161/217 (74%), Positives = 180/217 (82%)
Frame = +1
Query: 130 MRAEGMSXXXXXXXXXXXXCSRVHCVPADDLASKTVTLKGQITKLPAHNTAVVSSNTDFA 309
MRAEGMS CSRVHCVPADDLASK VTLK QI KLP HNTAVVSSNTDFA
Sbjct: 1 MRAEGMSLFLALGLLVAGLCSRVHCVPADDLASKIVTLKDQIKKLPVHNTAVVSSNTDFA 60
Query: 310 FSLYKQLVSLDPNKNVIFSPLSVSIALAFLSLGARGSTLTELLEGLKFNLTKTPEAEIHQ 489
FSLYKQL + +KN+IFSPLSVS+ALAFLSLGARG TLTELLEGLKFN+T+TPEAEIHQ
Sbjct: 61 FSLYKQLSLTNRHKNIIFSPLSVSMALAFLSLGARGPTLTELLEGLKFNVTETPEAEIHQ 120
Query: 490 GFQHLLRALSQPSNLLQLNVGNAMFVDERLKLLDKFVQDARELYFSEVFSISFKDSDAAV 669
GFQHLLR L++PSNLLQL +GNAMF+DE+L+LLDKFVQDARELY SE F +F+D +AA
Sbjct: 121 GFQHLLRTLNRPSNLLQLRLGNAMFIDEQLELLDKFVQDARELYHSEAFPTNFQDLEAAR 180
Query: 670 EFINNYVKNKTKGKIVDLFKQLSPDTVLVLVNCIYFK 780
IN+YVKNKT+GKIV+L K+L P T VLVN IYFK
Sbjct: 181 RLINDYVKNKTEGKIVELIKRLIPVTEAVLVNYIYFK 217
Score = 149 bits (375), Expect = 5e-36
Identities = 76/115 (66%), Positives = 89/115 (77%)
Frame = +3
Query: 1056 RRITALHLPRFSVSGDYTLHDILPHLGIKKVFSHQADLSGITDQARLKVSQVVHRAVLDV 1235
+RI ALHLPRFS+S DY L +ILP LGI+K+FS +ADLSGITD L VSQVVH AVLDV
Sbjct: 231 QRIEALHLPRFSISSDYKLQEILPRLGIQKIFSEEADLSGITDTTPLCVSQVVHSAVLDV 290
Query: 1236 DEEGTEGAAATGISIELTSIEFLTVHFNRPFLFSIIHKDTQSIIFSGKVTDPSQA 1400
DEEGTEGAA+TG+ IE S E V F+ PFLF+ + +DTQSIIF GKV +P A
Sbjct: 291 DEEGTEGAASTGVVIERKSFENFIVRFDSPFLFATVLRDTQSIIFLGKVVNPHPA 345
>ref|XP_001928507.1| PREDICTED: serpin A11 [Sus scrofa].
Length = 421
Score = 213 bits (543), Expect(2) = 1e-84
Identities = 112/244 (45%), Positives = 166/244 (68%), Gaps = 1/244 (0%)
Frame = +1
Query: 265 PAHNTAVVSSNTDFAFSLYKQLVSLDPNKNVIFSPLSVSIALAFLSLGARGSTLTELLEG 444
PA++ + + TDFA LYKQL + P N+ FSP+S+S LA LSLGA+ T T++LEG
Sbjct: 44 PAYHK-ITPTLTDFALRLYKQLAAETPG-NIFFSPVSISSTLALLSLGAQADTPTQILEG 101
Query: 445 LKFNLTKTPEAEIHQGFQHLLRALSQPSNLLQLNVGNAMFVDERLKLLDKFVQDARELYF 624
L FNLT+ PEA+IH+GFQ L+R L PS+ L++ VGN++F+D++LK F+ + RE+Y
Sbjct: 102 LGFNLTEIPEADIHRGFQSLIRTLDLPSSKLEMKVGNSLFLDKQLKPQQHFLDNIREVYG 161
Query: 625 SEVFSISFKDSDAAVEFINNYVKNKTKGKIVDLFKQLSPDTVLVLVNCIYFKAKWKTPFD 804
+ FS +F DS IN+Y++ +T G++VD ++ + DT++VL+N I+FKAKWK PF+
Sbjct: 162 ALAFSANFTDSGTTRRQINDYLRKQTYGQVVDCLEEFAQDTLMVLLNYIFFKAKWKHPFN 221
Query: 805 PSFTTEAD-FHVSKNRTVRVPMMGISGRTLPYFRDEELACTVVELPYTSNDSALFILPDD 981
P T + + F V + ++RVPMM + D E+ACTV+++ Y+ N AL ILPD
Sbjct: 222 PYQTQKQESFFVDERTSLRVPMMR-QKEMHRFLYDHEVACTVLQIEYSGNAQALLILPDP 280
Query: 982 GRMA 993
G+MA
Sbjct: 281 GKMA 284
Score = 119 bits (297), Expect(2) = 1e-84
Identities = 63/131 (48%), Positives = 86/131 (65%), Gaps = 3/131 (2%)
Frame = +3
Query: 1011 LLPETLRRWRDSLHQRRITALHLPRFSVSGDYTLHDILPHLGIKKVFSHQADLSGITDQA 1190
L PETLR+W D L + LHLPRFS+SG Y L +ILP +G+ +F+ +ADLSGIT Q
Sbjct: 290 LQPETLRKW-DQLLLPSLLDLHLPRFSISGTYNLEEILPRIGLTNLFTLEADLSGITGQL 348
Query: 1191 RLKVSQVVHRAVLDVDEEGTEGAAATGISIELTSIEFLT---VHFNRPFLFSIIHKDTQS 1361
VS+V H+A +D+ E GTE AAA+G+ + S+ + HFNRPFL + TQS
Sbjct: 349 NRTVSRVSHKAAVDMSERGTEAAAASGLLSQPQSLNTTSAPHAHFNRPFLVLLWEVTTQS 408
Query: 1362 IIFSGKVTDPS 1394
++F GKV +P+
Sbjct: 409 LLFLGKVVNPA 419
>ref|XP_001928604.1| PREDICTED: plasma serine protease inhibitor-like [Sus scrofa].
Length = 408
Score = 216 bits (551), Expect(2) = 1e-83
Identities = 115/249 (46%), Positives = 152/249 (61%)
Frame = +1
Query: 244 KGQITKLPAHNTAVVSSNTDFAFSLYKQLVSLDPNKNVIFSPLSVSIALAFLSLGARGST 423
K ++ KLP V DF F LY+ L + P +NV FSPLS+S++LA LSLGA+ ST
Sbjct: 28 KKRVLKLPPAVATVAPGIRDFTFDLYRTLAAASPEQNVFFSPLSISMSLAMLSLGAQSST 87
Query: 424 LTELLEGLKFNLTKTPEAEIHQGFQHLLRALSQPSNLLQLNVGNAMFVDERLKLLDKFVQ 603
++LEGL N + PE E+H Q LLR L QP LQL++GNA+F L + + F+
Sbjct: 88 KAQILEGLGLNPQEGPEEELHSASQRLLRELGQPREDLQLSLGNALFTKPTLSIQEAFLG 147
Query: 604 DARELYFSEVFSISFKDSDAAVEFINNYVKNKTKGKIVDLFKQLSPDTVLVLVNCIYFKA 783
R Y ++VF F+D + A + INNYV +TKGKIVDL K L V+V+VN I+FKA
Sbjct: 148 TLRTRYLADVFPTDFEDPEGAQKQINNYVVKQTKGKIVDLVKGLDGTEVMVMVNYIFFKA 207
Query: 784 KWKTPFDPSFTTEADFHVSKNRTVRVPMMGISGRTLPYFRDEELACTVVELPYTSNDSAL 963
KW+T F+ T E DFHV+ VRVPMM + Y D L+C VV +PY N +A
Sbjct: 208 KWETSFNHKITHEQDFHVTSETVVRVPMMKREDQ-FYYLLDRNLSCKVVGVPYQGNATAF 266
Query: 964 FILPDDGRM 990
F+LP +G M
Sbjct: 267 FVLPQEGGM 275
Score = 112 bits (281), Expect(2) = 1e-83
Identities = 62/140 (44%), Positives = 95/140 (67%), Gaps = 4/140 (2%)
Frame = +3
Query: 984 QDGGPWKPQ--LLPETLRRWRDSLHQRRITALHLPRFSVSGDYTLHDILPHLGIKKVFSH 1157
Q+GG + + L +TLR+W + +R LHLP+FS+ G Y L ++LP LGI+ VF+
Sbjct: 271 QEGGMEQVEKGLKEKTLRKWL-KMSMKRQLELHLPKFSIEGSYQLENVLPKLGIRDVFTS 329
Query: 1158 QADLSGITDQARLKVSQVVHRAVLDVDEEGTEGAAATGISIELTS--IEFLTVHFNRPFL 1331
ADL+GI++ + ++VS++VH+AV++VDE GT+ AAATG S I + FNRPFL
Sbjct: 330 HADLTGISNTSNIQVSEMVHKAVVEVDESGTKAAAATGTIFMFRSARISSQRIVFNRPFL 389
Query: 1332 FSIIHKDTQSIIFSGKVTDP 1391
I+ +++++I+F GKVT P
Sbjct: 390 MFIV-ENSKNILFVGKVTHP 408
>ref|XP_003356840.1| PREDICTED: LOW QUALITY PROTEIN: kallistatin-like [Sus scrofa].
Length = 424
Score = 211 bits (536), Expect(2) = 2e-82
Identities = 107/232 (46%), Positives = 147/232 (63%)
Frame = +1
Query: 295 NTDFAFSLYKQLVSLDPNKNVIFSPLSVSIALAFLSLGARGSTLTELLEGLKFNLTKTPE 474
NT FA Y +VS P N+ FSPLS+S A A LSLGA + T++LEGL FNLT+ +
Sbjct: 53 NTVFALHFYHLMVSQTPGSNIFFSPLSISAAYAMLSLGAGSLSRTQILEGLGFNLTEVSQ 112
Query: 475 AEIHQGFQHLLRALSQPSNLLQLNVGNAMFVDERLKLLDKFVQDARELYFSEVFSISFKD 654
+ HQGFQ+LL L P + L++++GNA+F+ + LL F+ D+ Y S++ +F
Sbjct: 113 PDTHQGFQNLLHTLHLPDDRLEIHMGNALFLSPEVLLLPXFLNDSERFYESKLLHANFXK 172
Query: 655 SDAAVEFINNYVKNKTKGKIVDLFKQLSPDTVLVLVNCIYFKAKWKTPFDPSFTTEADFH 834
+ INN+VK +T+GKIVDL LSPDT +VLVN IYFKA W+ PF+PS T DF+
Sbjct: 173 PAGTAQLINNHVKEETQGKIVDLVSGLSPDTTMVLVNYIYFKALWEKPFNPSMTIPQDFY 232
Query: 835 VSKNRTVRVPMMGISGRTLPYFRDEELACTVVELPYTSNDSALFILPDDGRM 990
V + TV+VPMM + Y D CTV+ + Y + +ALFILP+ G+M
Sbjct: 233 VDEVTTVKVPMMMQGPQHHWYLHDRHFPCTVLRMDYKGDATALFILPNXGKM 284
Score = 114 bits (286), Expect(2) = 2e-82
Identities = 63/133 (47%), Positives = 85/133 (63%), Gaps = 4/133 (3%)
Frame = +3
Query: 1011 LLPETLRRWRDSLHQR---RITALHLPRFSVSGDYTLHDILPHLGIKKVFSHQADLSGIT 1181
L PE L RWR+ L R + L++P+F +SG Y L ILP LGI +FS +AD SGIT
Sbjct: 291 LTPEMLTRWRNLLQNRYFYKKIKLYIPKFIISGSYELDQILPKLGIIDLFSQRADFSGIT 350
Query: 1182 DQARLKVSQVVHRAVLDVDEEGTEGAAATGISIELTSIE-FLTVHFNRPFLFSIIHKDTQ 1358
+Q L+VS+ H+A+L+VDE GT+ +AATG S + + FNRPFL +I TQ
Sbjct: 351 EQLNLQVSKSFHKAILEVDEVGTQASAATGSFFTFLSRDNQQALWFNRPFLVAIFSTSTQ 410
Query: 1359 SIIFSGKVTDPSQ 1397
SI+F GKV +P +
Sbjct: 411 SILFLGKVVNPKK 423
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 36,706,724
Number of extensions: 1098420
Number of successful extensions: 6251
Number of sequences better than 1.0e-05: 42
Number of HSP's gapped: 6120
Number of HSP's successfully gapped: 79
Length of query: 481
Length of database: 11,343,932
Length adjustment: 103
Effective length of query: 378
Effective length of database: 8,779,541
Effective search space: 3318666498
Effective search space used: 3318666498
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-000771
(1445 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr07 1302 0.0
>Sscrofa_Chr07
|| Length = 134764511
Score = 1302 bits (657), Expect = 0.0
Identities = 657/657 (100%)
Strand = Plus / Plus
Query: 125 cagacatgagggcggagggcatgtccctcttcctggctctgggcctcctggtggctgggc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122963667 cagacatgagggcggagggcatgtccctcttcctggctctgggcctcctggtggctgggc 122963726
Query: 185 tctgctccagggtccactgcgtcccagcggatgaccttgcctcaaagactgtgaccctga 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122963727 tctgctccagggtccactgcgtcccagcggatgaccttgcctcaaagactgtgaccctga 122963786
Query: 245 agggccagatcacgaagctgccagcgcacaacaccgccgtcgtctccagcaacaccgact 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122963787 agggccagatcacgaagctgccagcgcacaacaccgccgtcgtctccagcaacaccgact 122963846
Query: 305 tcgccttcagcctctacaagcagctggtttctttagaccccaataagaacgtcatcttct 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122963847 tcgccttcagcctctacaagcagctggtttctttagaccccaataagaacgtcatcttct 122963906
Query: 365 ccccgctgagcgtctccatagccttggccttcctgtctctgggggcccgaggctccaccc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122963907 ccccgctgagcgtctccatagccttggccttcctgtctctgggggcccgaggctccaccc 122963966
Query: 425 tgacagagctcctggaaggcctcaagttcaacctcacaaagacccccgaggcagaaatcc 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122963967 tgacagagctcctggaaggcctcaagttcaacctcacaaagacccccgaggcagaaatcc 122964026
Query: 485 accagggcttccagcacctcctgcgggccctcagccaacccagcaacctgctgcagctga 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122964027 accagggcttccagcacctcctgcgggccctcagccaacccagcaacctgctgcagctga 122964086
Query: 545 acgtgggcaacgccatgttcgtggatgagcggctgaagctgctggacaagttcgtccaag 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122964087 acgtgggcaacgccatgttcgtggatgagcggctgaagctgctggacaagttcgtccaag 122964146
Query: 605 atgcccgtgagctgtacttctccgaggtcttctccatcagctttaaggactccgatgctg 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122964147 atgcccgtgagctgtacttctccgaggtcttctccatcagctttaaggactccgatgctg 122964206
Query: 665 ccgtagagttcatcaacaactatgtgaagaataagaccaaggggaaaattgtggatttgt 724
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122964207 ccgtagagttcatcaacaactatgtgaagaataagaccaaggggaaaattgtggatttgt 122964266
Query: 725 tcaaacaactttccccggataccgtcctggttctggtgaactgcatctactttaaag 781
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122964267 tcaaacaactttccccggataccgtcctggttctggtgaactgcatctactttaaag 122964323
Score = 1144 bits (577), Expect = 0.0
Identities = 637/657 (96%)
Strand = Plus / Plus
Query: 125 cagacatgagggcggagggcatgtccctcttcctggctctgggcctcctggtggctgggc 184
||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct: 123036214 cagacatgagggcggagggaatgtccctcttcctggctctggggctcctggtggctgggc 123036273
Query: 185 tctgctccagggtccactgcgtcccagcggatgaccttgcctcaaagactgtgaccctga 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123036274 tctgctccagggtccactgcgtcccagcggatgaccttgcctcaaagactgtgaccctga 123036333
Query: 245 agggccagatcacgaagctgccagcgcacaacaccgccgtcgtctccagcaacaccgact 304
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123036334 agggccagatcaagaagctgccagcgcacaacaccgccgtcgtctccagcaacaccgact 123036393
Query: 305 tcgccttcagcctctacaagcagctggtttctttagaccccaataagaacgtcatcttct 364
||||||||||||||||||||||||||| | || | || | || ||||||||||
Sbjct: 123036394 tcgccttcagcctctacaagcagctggctctggccgaacgcagagaaaatgtcatcttct 123036453
Query: 365 ccccgctgagcgtctccatagccttggccttcctgtctctgggggcccgaggctccaccc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 123036454 ccccgctgagcgtctccatagccttggccttcctgtctctgggggcccgaggccccaccc 123036513
Query: 425 tgacagagctcctggaaggcctcaagttcaacctcacaaagacccccgaggcagaaatcc 484
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123036514 tgatagagctcctggaaggcctcaagttcaacctcacaaagacccccgaggcagaaatcc 123036573
Query: 485 accagggcttccagcacctcctgcgggccctcagccaacccagcaacctgctgcagctga 544
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 123036574 accagggcttccagcacctcctgcaggccctcagccaacccagcaacctgctgcagctga 123036633
Query: 545 acgtgggcaacgccatgttcgtggatgagcggctgaagctgctggacaagttcgtccaag 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123036634 acgtgggcaacgccatgttcgtggatgagcggctgaagctgctggacaagttcgtccaag 123036693
Query: 605 atgcccgtgagctgtacttctccgaggtcttctccatcagctttaaggactccgatgctg 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123036694 atgcccgtgagctgtacttctccgaggtcttctccatcagctttaaggactccgatgctg 123036753
Query: 665 ccgtagagttcatcaacaactatgtgaagaataagaccaaggggaaaattgtggatttgt 724
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123036754 ccgtagagttcatcaacaactatgtgaagaataagaccaaggggaaaattgtggatttgt 123036813
Query: 725 tcaaacaactttccccggataccgtcctggttctggtgaactgcatctactttaaag 781
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123036814 tcaaacaactttccccggataccgtcctggttctggtgaactgcatctactttaaag 123036870
Score = 936 bits (472), Expect = 0.0
Identities = 502/512 (98%)
Strand = Plus / Minus
Query: 125 cagacatgagggcggagggcatgtccctcttcctggctctgggcctcctggtggctgggc 184
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 123101427 cagacatgagggcggagggaatgtccctcttcctggctctgggcctcctggtggctgggc 123101368
Query: 185 tctgctccagggtccactgcgtcccagcggatgaccttgcctcaaagactgtgaccctga 244
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 123101367 tctgctccagggtccactgcgtcccagcggatgaccttgcctcaaagattgtgaccctga 123101308
Query: 245 agggccagatcacgaagctgccagcgcacaacaccgccgtcgtctccagcaacaccgact 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123101307 agggccagatcacgaagctgccagcgcacaacaccgccgtcgtctccagcaacaccgact 123101248
Query: 305 tcgccttcagcctctacaagcagctggtttctttagaccccaataagaacgtcatcttct 364
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 123101247 tcgccttcagcctctacaagcagctggtttctttagaccccagtaagaacgtcatcttct 123101188
Query: 365 ccccgctgagcgtctccatagccttggccttcctgtctctgggggcccgaggctccaccc 424
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 123101187 ccccgctgagcgtctccatagccttggccttcctgtctctgggggcccaaggctccaccc 123101128
Query: 425 tgacagagctcctggaaggcctcaagttcaacctcacaaagacccccgaggcagaaatcc 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123101127 tgacagagctcctggaaggcctcaagttcaacctcacaaagacccccgaggcagaaatcc 123101068
Query: 485 accagggcttccagcacctcctgcgggccctcagccaacccagcaacctgctgcagctga 544
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 123101067 accagggcttccagcacctcctgcaggccctcagccaacccagcaacctgctgcagctga 123101008
Query: 545 acgtgggcaacgccatgttcgtggatgagcggctgaagctgctggacaagttcgtccaag 604
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 123101007 acgtgggcaacgccatgttcgtggatgagcatctgaagctgctggacaagttcgtccaag 123100948
Query: 605 atgcccgtgagctgtacttctccgaggtcttc 636
||||||||||||||||| |||||||| ||||
Sbjct: 123100947 atgcccgtgagctgtaccactccgaggccttc 123100916
Score = 654 bits (330), Expect = 0.0
Identities = 541/606 (89%), Gaps = 4/606 (0%)
Strand = Plus / Minus
Query: 125 cagacatgagggcggagggcatgtccctcttcctggctctgggcctcctggtggctgggc 184
|||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct: 123117426 cagacacgagggtagagggaatgtccctcttcctggctctgggcctcctggtggctggac 123117367
Query: 185 tctgctccagggtccactgcgtcccagcggatgaccttgcctcaaagactgtgaccctga 244
|||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 123117366 tctgctccagggtccactgcgtcccagcggatgaccctgcctcaaagattgtgaccctga 123117307
Query: 245 agggccagatcacgaagctgccagcgcacaacaccgccgtcgtctccagcaacaccgact 304
||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123117306 aggaccagatcaagaagctgccagcgcacaacaccgccgtcgtctccagcaacaccgact 123117247
Query: 305 tcgccttcagcctctacaagcagctggtttctttag-accccaataagaacgtcatcttc 363
||||||||||||||||||||||||||| ||| | |||| || |||| |||||||||
Sbjct: 123117246 tcgccttcagcctctacaagcagctgg-ctctgacgaacccgcatgagaatgtcatcttc 123117188
Query: 364 tccccgctgagcgtctccatagccttggccttcctgtctctgggggcccgaggctccacc 423
|||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||
Sbjct: 123117187 tccccgctgagcgtctccatggccttggccttcctgtctctgggggcccgaggccccacc 123117128
Query: 424 ctgacagagctcctggaaggcctcaagttcaacctcacaaagacccccgaggcagaaatc 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123117127 ctgacagagctcctggaaggcctcaagttcaacctcacaaagacccccgaggcagaaatc 123117068
Query: 484 caccagggcttccagcacctcctgcgggccctcagccaacccagcaacctgctgcagctg 543
|||||||||||||||||||||||| | | ||| | | || |||||||||||||||
Sbjct: 123117067 caccagggcttccagcacctcctgagcacgctcgacaggtcgagtaacctgctgcagctg 123117008
Query: 544 aacgtgggcaacgccatgttcgtggatgagcggctgaagctgctggacaagttcgtccaa 603
| ||||||| ||||||||| | ||||||| |||| |||||||||||||||||||||||
Sbjct: 123117007 aggttgggcaatgccatgttcattgatgagcagctggagctgctggacaagttcgtccaa 123116948
Query: 604 gatgcccgtgagctgtacttctccgaggtcttctccatcagctttaaggactccgatgct 663
||||||| |||||||||| |||||||| |||| ||| | ||| |||| | || |||
Sbjct: 123116947 gatgcccatgagctgtaccactccgaggccttccccactaacttccaggatttagaagct 123116888
Query: 664 gcc-gtagagttcatcaacaactatgtgaagaataagaccaaggggaaaattgtggattt 722
||| | ||| |||| || |||||||||||||||||||| |||| ||||||||||| ||
Sbjct: 123116887 gccaggaga-ctcattaatgactatgtgaagaataagaccgagggaaaaattgtggactt 123116829
Query: 723 gttcaa 728
||||||
Sbjct: 123116828 gttcaa 123116823
Score = 644 bits (325), Expect = 0.0
Identities = 468/513 (91%), Gaps = 2/513 (0%)
Strand = Plus / Plus
Query: 125 cagacatgagggcggagggcatgtccctcttcctggctctgggcctcctggtggctgggc 184
||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 122933474 cagacatgagggcagagggaatgtccctcttcctggctctgggcctcctggtggctgggc 122933533
Query: 185 tctgctccagggtccactgcgtcccagcggatgaccttgcctcaaagactgtgaccctga 244
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 122933534 tctgctccagggtccactgcgtcccagcggatgaccttgcctcaaagattgtgaccctga 122933593
Query: 245 agggccagatcacgaagctgccagcgcacaacaccgccgtcgtctccagcaacaccgact 304
||| |||||||| ||||||||||| ||||||||||||||| |||||||||||||||||||
Sbjct: 122933594 aggaccagatcaagaagctgccagtgcacaacaccgccgtggtctccagcaacaccgact 122933653
Query: 305 tcgccttcagcctctacaagcagctggtttctttag-accccaataagaacgtcatcttc 363
||||||||||||||||||||||||| || ||| | ||| ||||||| ||||||||
Sbjct: 122933654 tcgccttcagcctctacaagcagct-gtctctgacgaaccgtcataagaatatcatcttc 122933712
Query: 364 tccccgctgagcgtctccatagccttggccttcctgtctctgggggcccgaggctccacc 423
|||||||||||||||||||| ||||||||||||||||| |||| ||||||||| |||||
Sbjct: 122933713 tccccgctgagcgtctccatggccttggccttcctgtccttgggagcccgaggccccacc 122933772
Query: 424 ctgacagagctcctggaaggcctcaagttcaacctcacaaagacccccgaggcagaaatc 483
|||||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||
Sbjct: 122933773 ctgacagagctcctggaaggcctcaagttcaatgtcacagagacccctgaggcagaaatc 122933832
Query: 484 caccagggcttccagcacctcctgcgggccctcagccaacccagcaacctgctgcagctg 543
|||||||||||||||||||||||| || | |||| | || ||||||||||||||||||
Sbjct: 122933833 caccagggcttccagcacctcctgaggacgctcaacaggccgagcaacctgctgcagctg 122933892
Query: 544 aacgtgggcaacgccatgttcgtggatgagcggctgaagctgctggacaagttcgtccaa 603
| ||||||||||||||||| | ||||||| |||| |||||||||||||||||||||||
Sbjct: 122933893 aggttgggcaacgccatgttcattgatgagcagctggagctgctggacaagttcgtccaa 122933952
Query: 604 gatgcccgtgagctgtacttctccgaggtcttc 636
|||||||||||||||||| |||||||| ||||
Sbjct: 122933953 gatgcccgtgagctgtaccactccgaggccttc 122933985
Score = 563 bits (284), Expect = e-158
Identities = 302/308 (98%)
Strand = Plus / Minus
Query: 290 ccagcaacaccgacttcgccttcagcctctacaagcagctggtttctttagaccccaata 349
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 123022910 ccagcaacaccgacttcgccttcagcctctacaagcagctggtttctttagaccccagta 123022851
Query: 350 agaacgtcatcttctccccgctgagcgtctccatagccttggccttcctgtctctggggg 409
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123022850 agaacgtcatcttctccccgctgagcgtctccatagccttggccttcctgtctctggggg 123022791
Query: 410 cccgaggctccaccctgacagagctcctggaaggcctcaagttcaacctcacaaagaccc 469
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123022790 cccgaggccccaccctgacagagctcctggaaggcctcaagttcaacctcacaaagaccc 123022731
Query: 470 ccgaggcagaaatccaccagggcttccagcacctcctgcgggccctcagccaacccagca 529
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 123022730 ccgaggcagaaatccaccagggcttccagcacctcctgcaggccctcagccaacccagca 123022671
Query: 530 acctgctgcagctgaacgtgggcaacgccatgttcgtggatgagcggctgaagctgctgg 589
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 123022670 acctgctgcagctgaacgtgggcaacgccatgttcgtggatgagcatctgaagctgctgg 123022611
Query: 590 acaagttc 597
|| |||||
Sbjct: 123022610 acgagttc 123022603
Score = 547 bits (276), Expect = e-153
Identities = 300/308 (97%)
Strand = Plus / Plus
Query: 290 ccagcaacaccgacttcgccttcagcctctacaagcagctggtttctttagaccccaata 349
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 122999543 ccagcaacaccgacttcgccttcagcctctacaagcagctggtttctttagaccccagta 122999602
Query: 350 agaacgtcatcttctccccgctgagcgtctccatagccttggccttcctgtctctggggg 409
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 122999603 agaacgtcatcttctccccgctgagcgtctccatggccttggccttcctgtctctggggg 122999662
Query: 410 cccgaggctccaccctgacagagctcctggaaggcctcaagttcaacctcacaaagaccc 469
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122999663 cccgaggccccaccctgacagagctcctggaaggcctcaagttcaacctcacaaagaccc 122999722
Query: 470 ccgaggcagaaatccaccagggcttccagcacctcctgcgggccctcagccaacccagca 529
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 122999723 ccgaggcagaaatccaccagggcttccagcacctcctgcaggccctcagccaacccagca 122999782
Query: 530 acctgctgcagctgaacgtgggcaacgccatgttcgtggatgagcggctgaagctgctgg 589
||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||
Sbjct: 122999783 acctgctgcagctgaacgtgggcaacgccatgttcgtggatgaacatctgaagctgctgg 122999842
Query: 590 acaagttc 597
|| |||||
Sbjct: 122999843 acgagttc 122999850
Score = 511 bits (258), Expect = e-142
Identities = 275/278 (98%), Gaps = 2/278 (0%)
Strand = Plus / Plus
Query: 780 agccaagtggaagacgccctttgatcccagctttaccacggaggcagatttccacgtgag 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122965989 agccaagtggaagacgccctttgatcccagctttaccacggaggcagatttccacgtgag 122966048
Query: 840 caagaacaggacggtgagggtgcccatgatgggcatttcgggccggaccctgccttactt 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122966049 caagaacaggacggtgagggtgcccatgatgggcatttcgggccggaccctgccttactt 122966108
Query: 900 ccgggacgaggagctggcctgcacggtggtggagctcccgtacaccagcaacgacagcgc 959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122966109 ccgggacgaggagctggcctgcacggtggtggagctcccgtacaccagcaacgacagcgc 122966168
Query: 960 gctcttcatcctccctgacgacggcaggatggcggcccgtggaaaccccagctgctcccg 1019
||||||||||||||||||||||||||||||||||| |||||| || ||||||||||||||
Sbjct: 122966169 gctcttcatcctccctgacgacggcaggatggcgg-ccgtgg-aagcccagctgctcccg 122966226
Query: 1020 gagacgctgaggaggtggagagactccctgcaccagag 1057
||||||||||||||||||||||||||||||||||||||
Sbjct: 122966227 gagacgctgaggaggtggagagactccctgcaccagag 122966264
Score = 468 bits (236), Expect = e-129
Identities = 239/240 (99%)
Strand = Plus / Plus
Query: 1206 caggtggtccacagagctgtgcttgacgtggacgaggagggcacggaaggagctgctgcc 1265
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122969456 caggtggtccacagagctgtgcttgacgtggacgaggagggcacggaaggagctgctgcc 122969515
Query: 1266 acgggaatcagcatagaactcacatccatagagtttttgacggtgcatttcaacaggccc 1325
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122969516 acgggaatcagcatagaactcacatccatagagtttttgacggtgcatttcaacaggccc 122969575
Query: 1326 tttctcttttccataattcacaaagacacccagagcatcatcttttcaggcaaagtcacc 1385
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122969576 tttctcttttccataattcacaaagacacccagagcatcatcttttcaggcaaagtcacc 122969635
Query: 1386 gaccccagtcaagcctagagctcccctccaattgccaggtctcctcattaaggagctggg 1445
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 122969636 gaccccagtcaagcctagagctcccctccaagtgccaggtctcctcattaaggagctggg 122969695
Score = 396 bits (200), Expect = e-107
Identities = 256/272 (94%), Gaps = 2/272 (0%)
Strand = Plus / Minus
Query: 780 agccaagtggaagacgccctttgatcccagctttaccacggaggcagatttccacgtgag 839
||||||||||||||||||||| |||||| ||| ||||||||||||||||||||||||||
Sbjct: 123115289 agccaagtggaagacgcccttcaatcccaacttaaccacggaggcagatttccacgtgag 123115230
Query: 840 caagaacaggacggtgagggtgcccatgatgggcatttcgggccggaccctgccttactt 899
||||||||||||||||||||||||||||||||||||| || || |||| ||||||||||
Sbjct: 123115229 caagaacaggacggtgagggtgcccatgatgggcattagggccctgaccgtgccttactt 123115170
Query: 900 ccgggacgaggagctggcctgcacggtggtggagctcccgtacaccagcaacgacagcgc 959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123115169 ccgggacgaggagctggcctgcacggtggtggagctcccgtacaccagcaacgacagcgc 123115110
Query: 960 gctcttcatcctccctgacgacggcaggatggcggcccgtggaaaccccagctgctcccg 1019
||||||||||||||||||||||||||||||||||| |||||| || || ||||||||||
Sbjct: 123115109 gctcttcatcctccctgacgacggcaggatggcgg-ccgtgg-aagccaagctgctccct 123115052
Query: 1020 gagacgctgaggaggtggagagactccctgca 1051
||||| ||||||||||||||||||| ||||||
Sbjct: 123115051 gagacactgaggaggtggagagacttcctgca 123115020
Score = 325 bits (164), Expect = 4e-86
Identities = 247/272 (90%), Gaps = 2/272 (0%)
Strand = Plus / Minus
Query: 780 agccaagtggaagacgccctttgatcccagctttaccacggaggcagatttccacgtgag 839
|||| |||||| ||| | ||||||||||| | |||| ||||||||||||||| |||||||
Sbjct: 123099167 agcccagtggatgacacactttgatcccaaccttactacggaggcagatttctacgtgag 123099108
Query: 840 caagaacaggacggtgagggtgcccatgatgggcatttcgggccggaccctgccttactt 899
|||||||| ||| |||| ||||||||||||||||||| | || |||| |||| |||||
Sbjct: 123099107 caagaacaagacagtgaaggtgcccatgatgggcattaagaacctgaccgtgccatactt 123099048
Query: 900 ccgggacgaggagctggcctgcacggtggtggagctcccgtacaccagcaacgacagcgc 959
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 123099047 ccgggacgaggagctggcctgcacggtggtggagctcccgtacaccagcaacgacagcac 123098988
Query: 960 gctcttcatcctccctgacgacggcaggatggcggcccgtggaaaccccagctgctcccg 1019
||||||||||||||||||||||||||||||||||| |||||| || || | |||||||||
Sbjct: 123098987 gctcttcatcctccctgacgacggcaggatggcgg-ccgtgg-aagccaatctgctcccg 123098930
Query: 1020 gagacgctgaggaggtggagagactccctgca 1051
|||| |||||||||||||||||||||||||||
Sbjct: 123098929 gagatgctgaggaggtggagagactccctgca 123098898
Score = 307 bits (155), Expect = 9e-81
Identities = 155/155 (100%)
Strand = Plus / Plus
Query: 1056 agacggataactgccctccacctgccacggttttccgtctccggggactatacgctgcat 1115
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122968307 agacggataactgccctccacctgccacggttttccgtctccggggactatacgctgcat 122968366
Query: 1116 gacatccttccccacctgggcattaagaaagtcttcagccatcaggctgacctgtcagga 1175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122968367 gacatccttccccacctgggcattaagaaagtcttcagccatcaggctgacctgtcagga 122968426
Query: 1176 atcacagatcaagcacgcctgaaagtttcccaggt 1210
|||||||||||||||||||||||||||||||||||
Sbjct: 122968427 atcacagatcaagcacgcctgaaagtttcccaggt 122968461
Score = 278 bits (140), Expect = 8e-72
Identities = 207/224 (92%), Gaps = 4/224 (1%)
Strand = Plus / Minus
Query: 829 ttccacgtgagcaagaacaggacggtgagggtgcccatgatgggcatttcgggcc-ggac 887
||||||||||||||||||||||| |||| ||||||||||||| || || |||| |||
Sbjct: 123020815 ttccacgtgagcaagaacaggacagtgaaggtgcccatgatgagccttcgaggcctggaa 123020756
Query: 888 cctgccttacttccgggacgaggagctggcctgcacggtggtggagctcccgtacaccag 947
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123020755 aca-ccttacttccgggacgaggagctggcctgcacggtggtggagctcccgtacaccag 123020697
Query: 948 caacgacagcgcgctcttcatcctccctgacgacggcaggatggcggcccgtggaaaccc 1007
||||||||||||||||||||||||||||||||| ||||||||||||| |||||| || ||
Sbjct: 123020696 caacgacagcgcgctcttcatcctccctgacgatggcaggatggcgg-ccgtgg-aagcc 123020639
Query: 1008 cagctgctcccggagacgctgaggaggtggagagactccctgca 1051
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123020638 aagctgctcccggagacgctgaggaggtggagagactccctgca 123020595
Score = 252 bits (127), Expect = 5e-64
Identities = 189/203 (93%), Gaps = 5/203 (2%)
Strand = Plus / Plus
Query: 780 agccaagtggaagacgccctttgatcccagctttaccacggaggcagatttccacgtgag 839
|||||||||||||| |||||| |||||| |||||| |||| ||||||||||||||||||
Sbjct: 123038539 agccaagtggaagatgcccttc-atcccaactttac-acgggggcagatttccacgtgag 123038596
Query: 840 caagaacaggacggtgagggtgcccatgatgggcatttcgggccggaccctgccttactt 899
||||||||| ||||||||| ||||||||||||||||| ||||||| ||| ||||||||||
Sbjct: 123038597 caagaacag-acggtgagg-tgcccatgatgggcattacgggccgcaccgtgccttactt 123038654
Query: 900 ccgggacgaggagctggcctgcacggtggtggagctcccgtacaccagcaacgacagcgc 959
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123038655 ccgggaacaggagctggcctgcacggtggtggagctcccgtacaccagcaacgacagcgc 123038714
Query: 960 gctcttcatcctccctgacgacg 982
|||| ||||||||||||||||||
Sbjct: 123038715 gctc-tcatcctccctgacgacg 123038736
Score = 129 bits (65), Expect = 5e-27
Identities = 77/81 (95%)
Strand = Plus / Plus
Query: 129 catgagggcggagggcatgtccctcttcctggctctgggcctcctggtggctgggctctg 188
||||| ||| ||||||||||||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 122999382 catgaaggcagagggcatgtcccccttcctggctctggggctcctggtggctgggctctg 122999441
Query: 189 ctccagggtccactgcgtccc 209
|||||||||||||||||||||
Sbjct: 122999442 ctccagggtccactgcgtccc 122999462
Score = 129 bits (65), Expect = 5e-27
Identities = 77/81 (95%)
Strand = Plus / Minus
Query: 129 catgagggcggagggcatgtccctcttcctggctctgggcctcctggtggctgggctctg 188
||||| ||| ||||||||||||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 123023071 catgaaggcagagggcatgtcccccttcctggctctggggctcctggtggctgggctctg 123023012
Query: 189 ctccagggtccactgcgtccc 209
|||||||||||||||||||||
Sbjct: 123023011 ctccagggtccactgcgtccc 123022991
Score = 117 bits (59), Expect = 2e-23
Identities = 59/59 (100%)
Strand = Plus / Plus
Query: 69 agcattgcgggcaggtggtggctctgggtccactcagcgcatcccgctctgcgaggcag 127
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122961778 agcattgcgggcaggtggtggctctgggtccactcagcgcatcccgctctgcgaggcag 122961836
Score = 105 bits (53), Expect = 7e-20
Identities = 101/117 (86%)
Strand = Plus / Plus
Query: 1068 gccctccacctgccacggttttccgtctccggggactatacgctgcatgacatccttccc 1127
|||||||||||||||||||||||| ||||| | ||||||| ||||| || |||||||||
Sbjct: 122936840 gccctccacctgccacggttttccatctccagcgactataaactgcaggagatccttccc 122936899
Query: 1128 cacctgggcattaagaaagtcttcagccatcaggctgacctgtcaggaatcacagat 1184
| |||||||| ||||| ||||||| | ||||||||||||||||||||||||||
Sbjct: 122936900 cggctgggcatccagaaaatcttcagtgaggaggctgacctgtcaggaatcacagat 122936956
Score = 101 bits (51), Expect = 1e-18
Identities = 57/59 (96%)
Strand = Plus / Minus
Query: 69 agcattgcgggcaggtggtggctctgggtccactcagcgcatcccgctctgcgaggcag 127
||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 122953936 agcattgcgggcaggcggcggctctgggtccactcagcgcatcccgctctgcgaggcag 122953878
Score = 101 bits (51), Expect = 1e-18
Identities = 57/59 (96%)
Strand = Plus / Minus
Query: 69 agcattgcgggcaggtggtggctctgggtccactcagcgcatcccgctctgcgaggcag 127
||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 123103334 agcattgcgggcaggcggcggctctgggtccactcagcgcatcccgctctgcgaggcag 123103276
Score = 93.7 bits (47), Expect = 3e-16
Identities = 107/127 (84%)
Strand = Plus / Plus
Query: 1056 agacggataactgccctccacctgccacggttttccgtctccggggactatacgctgcat 1115
||||||||| ||||||| ||||||||||||||||||||||||| |||||| ||| |
Sbjct: 123001110 agacggatagatgccctctacctgccacggttttccgtctccggcgactatcaactggag 123001169
Query: 1116 gacatccttccccacctgggcattaagaaagtcttcagccatcaggctgacctgtcagga 1175
|||| |||| || ||||||||| ||||||| |||| ||| |||||||||||||||||
Sbjct: 123001170 gacacccttaagcagctgggcattcagaaagtgttcacccacgaggctgacctgtcagga 123001229
Query: 1176 atcacag 1182
||||||
Sbjct: 123001230 gtcacag 123001236
Score = 93.7 bits (47), Expect = 3e-16
Identities = 56/59 (94%)
Strand = Plus / Minus
Query: 69 agcattgcgggcaggtggtggctctgggtccactcagcgcatcccgctctgcgaggcag 127
||||||||||||||| || ||||||||||||||||||| ||||||||||||||||||||
Sbjct: 123024977 agcattgcgggcaggcggcggctctgggtccactcagcacatcccgctctgcgaggcag 123024919
Score = 93.7 bits (47), Expect = 3e-16
Identities = 56/59 (94%)
Strand = Plus / Minus
Query: 69 agcattgcgggcaggtggtggctctgggtccactcagcgcatcccgctctgcgaggcag 127
||||||||||||||| || ||||||||||||||||||||||||| ||||||||||||||
Sbjct: 123119625 agcattgcgggcaggcggcggctctgggtccactcagcgcatcctgctctgcgaggcag 123119567
Score = 85.7 bits (43), Expect = 6e-14
Identities = 106/127 (83%)
Strand = Plus / Minus
Query: 1056 agacggataactgccctccacctgccacggttttccgtctccggggactatacgctgcat 1115
||||||||| ||||||| |||||||||||||||| |||||||| |||||| ||| |
Sbjct: 123017895 agacggatagatgccctctacctgccacggttttctgtctccggcgactatcaactgaag 123017836
Query: 1116 gacatccttccccacctgggcattaagaaagtcttcagccatcaggctgacctgtcagga 1175
|||| |||| || ||||||||| ||||||| |||| ||| |||||||||||||||||
Sbjct: 123017835 gacacccttaagcagctgggcattcagaaagtgttcacccacgaggctgacctgtcagga 123017776
Query: 1176 atcacag 1182
||||||
Sbjct: 123017775 gtcacag 123017769
Score = 83.8 bits (42), Expect = 2e-13
Identities = 99/118 (83%)
Strand = Plus / Minus
Query: 1067 tgccctccacctgccacggttttccgtctccggggactatacgctgcatgacatccttcc 1126
||||||||||||||||||||||||| ||||| | ||||||| ||| | || ||||||||
Sbjct: 123096184 tgccctccacctgccacggttttccatctccagcgactataaactggaggagatccttcc 123096125
Query: 1127 ccacctgggcattaagaaagtcttcagccatcaggctgacctgtcaggaatcacagat 1184
|| |||||||| ||| || | ||||| ||||||||||||||||||||||||||
Sbjct: 123096124 ccggctgggcatcaaggaaattttcagtgcggaggctgacctgtcaggaatcacagat 123096067
Score = 81.8 bits (41), Expect = 1e-12
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 1206 caggtggtccacagagctgtgcttgacgtggacgaggagggcacggaaggagctgctgcc 1265
|||||||||||||| ||||||||||||||| ||||||||||||| |||| ||||| |||
Sbjct: 123110924 caggtggtccacagcgctgtgcttgacgtgaacgaggagggcacagaagcggctgccgcc 123110865
Query: 1266 acgggaatc 1274
|| ||||||
Sbjct: 123110864 accggaatc 123110856
Score = 73.8 bits (37), Expect = 2e-10
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 1206 caggtggtccacagagctgtgcttgacgtggacgaggagggcacggaaggagc 1258
|||||||||||||| || ||||| |||||||| ||||||||||||||||||||
Sbjct: 122938046 caggtggtccacagcgccgtgctggacgtggatgaggagggcacggaaggagc 122938098
Score = 73.8 bits (37), Expect = 2e-10
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 1206 caggtggtccacagagctgtgcttgacgtggacgaggagggcacggaaggagc 1258
|||||||||||||| || ||||| |||||||| ||||||||||||||||||||
Sbjct: 123095082 caggtggtccacagcgccgtgctggacgtggatgaggagggcacggaaggagc 123095030
Score = 71.9 bits (36), Expect = 9e-10
Identities = 60/68 (88%)
Strand = Plus / Minus
Query: 1206 caggtggtccacagagctgtgcttgacgtggacgaggagggcacggaaggagctgctgcc 1265
|||||| |||||| || |||||||| |||| ||||||||||||||||| ||||||||||
Sbjct: 123016663 caggtgatccacaaggcggtgcttgatgtgggcgaggagggcacggaagcagctgctgcc 123016604
Query: 1266 acgggaat 1273
|| |||||
Sbjct: 123016603 actggaat 123016596
Score = 63.9 bits (32), Expect = 2e-07
Identities = 59/68 (86%)
Strand = Plus / Plus
Query: 1206 caggtggtccacagagctgtgcttgacgtggacgaggagggcacggaaggagctgctgcc 1265
|||||| |||||| || |||||||| |||| |||| |||||||||||| ||||||||||
Sbjct: 123002340 caggtgatccacaaggcggtgcttgatgtgggcgagaagggcacggaagcagctgctgcc 123002399
Query: 1266 acgggaat 1273
|| |||||
Sbjct: 123002400 actggaat 123002407
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 37,477,618
Number of extensions: 275
Number of successful extensions: 275
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 267
Number of HSP's successfully gapped: 36
Length of query: 1445
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 1424
Effective length of database: 2,808,413,156
Effective search space: 3999180334144
Effective search space used: 3999180334144
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)