Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-000796
(1107 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001075181.1| SERPINA3-8 [Bos taurus]. 377 e-105
Alignment gi|XP_002696874.1| PREDICTED: endopin 2C-like [Bos taurus]. 369 e-102
Alignment gi|NP_001139774.1| serpin A3-6 [Bos taurus]. 366 e-101
Alignment gi|NP_001075213.1| serpin A3-5 [Bos taurus]. 362 e-100
Alignment gi|XP_001252647.3| PREDICTED: endopin 2B-like [Bos taurus]. 361 e-100
Alignment gi|NP_001139773.1| serpin A3-2 [Bos taurus]. 357 1e-98
Alignment gi|NP_777193.2| serpin A3-1 precursor [Bos taurus]. 355 4e-98
Alignment gi|NP_001033293.1| serpin A3-3 [Bos taurus]. 354 9e-98
Alignment gi|XP_001787316.2| PREDICTED: endopin 2C-like [Bos taurus]. 352 1e-97
Alignment gi|NP_001012283.2| serpin A3-7 [Bos taurus]. 351 6e-97
>ref|NP_001075181.1| SERPINA3-8 [Bos taurus].
Length = 418
Score = 377 bits (969), Expect = e-105
Identities = 205/342 (59%), Positives = 240/342 (70%)
Frame = +2
Query: 77 MRAEGMSXXXXXXXXXXXXCSRVHCVPADDLASKTVTLKGQIKKLPAHNTAVVSSNTDFA 256
MRAE MS CSRVHC+P + V + + K ++ SSNTDFA
Sbjct: 1 MRAERMSPLLALGLLVSGLCSRVHCLP------ENVAPEERHKGTSVDGHSLASSNTDFA 54
Query: 257 FSLYKQLALAERRENVIFSPLSVSIALAFLSLGARGPTLIELLEGLKFNLTKTPEAEIHQ 436
FSLYKQLAL +NVIFSPLS+SIALAFLSLGARGPT+ E+LEGLKFNLT+TPE EIHQ
Sbjct: 55 FSLYKQLALKNPNKNVIFSPLSISIALAFLSLGARGPTVTEILEGLKFNLTETPEREIHQ 114
Query: 437 GFQHLLQALSQPSNLLQLNVGNAMFVDERLKLLDKFVQDARELYFSEVFSISFKDSDAAI 616
GFQHLLQ LS+PSN LQL+VGN MFV E+LKLLDKF +DA LY SE FS +FKD + A
Sbjct: 115 GFQHLLQMLSRPSNELQLSVGNTMFVQEQLKLLDKFREDALALYTSEAFSTNFKDPETAK 174
Query: 617 EFINNYVKNKTKGKIVDLFKQLSPDTVLVLVNCIYFKAKWKMPFNPNFTTGADFHVSKNR 796
IN+YVKNKT+GKIVDLFK L P T ++LVN IYFKA+W+ PF+P T + FHVSKN+
Sbjct: 175 SLINDYVKNKTRGKIVDLFKDLDPLTKVILVNYIYFKAQWRTPFDPKQTYKSQFHVSKNK 234
Query: 797 TVRVPMMGITGRTVPYFRDQELACTVVELPYTSNDSALFILPDDGRMEDVESQAAPGDTE 976
TV VPMM I PYFRD+EL CT+VEL YTSNDSALFILPD+G+M+D+E++ P
Sbjct: 235 TVEVPMMSIGDLVTPYFRDEELDCTLVELTYTSNDSALFILPDEGKMQDLEAKLIPEMLT 294
Query: 977 EVEETPCSPNG*LPSTCHGFPSPGDYKLHDILPHLGIKKVFT 1102
E+ P G F DYKL DIL L IKKVFT
Sbjct: 295 RWRES-LYPRGIHELNLPRFSIATDYKLKDILSQLEIKKVFT 335
>ref|XP_002696874.1| PREDICTED: endopin 2C-like [Bos taurus].
Length = 417
Score = 369 bits (947), Expect = e-102
Identities = 200/342 (58%), Positives = 239/342 (69%)
Frame = +2
Query: 77 MRAEGMSXXXXXXXXXXXXCSRVHCVPADDLASKTVTLKGQIKKLPAHNTAVVSSNTDFA 256
MR E MS CSRVHC+P + VT + Q K ++ SSNTDFA
Sbjct: 1 MRTERMSPLLALGLLVSGLCSRVHCLP------ENVTPEEQHKVTSVDGHSLASSNTDFA 54
Query: 257 FSLYKQLALAERRENVIFSPLSVSIALAFLSLGARGPTLIELLEGLKFNLTKTPEAEIHQ 436
FSLYKQLAL + +NVIFSPLS+SIALAFLSLGA GPT+ E+LEGLKFNLT+TPE EIHQ
Sbjct: 55 FSLYKQLALKDPNKNVIFSPLSISIALAFLSLGAHGPTVTEILEGLKFNLTETPETEIHQ 114
Query: 437 GFQHLLQALSQPSNLLQLNVGNAMFVDERLKLLDKFVQDARELYFSEVFSISFKDSDAAI 616
GFQHLLQ +QPSN LQL+VGNA+FV E LKLLDKF +DA Y SEV SI+FKDS+AA+
Sbjct: 115 GFQHLLQTFNQPSNQLQLSVGNAIFVPEELKLLDKFRKDAEAFYASEVLSINFKDSEAAV 174
Query: 617 EFINNYVKNKTKGKIVDLFKQLSPDTVLVLVNCIYFKAKWKMPFNPNFTTGADFHVSKNR 796
+ IN YVKNKT GKI L L T L+L+N I+FKA+WK PFNPN T ++FHVSKN
Sbjct: 175 KLINEYVKNKTHGKIEKLLNDLDVLTNLILLNYIFFKAQWKTPFNPNHTYESEFHVSKNE 234
Query: 797 TVRVPMMGITGRTVPYFRDQELACTVVELPYTSNDSALFILPDDGRMEDVESQAAPGDTE 976
V+VPMM + T PYFRD+EL CT+VEL YTSNDSALFILPD+G+M+D+E++ P +T
Sbjct: 235 RVKVPMMTLRLET-PYFRDEELGCTLVELTYTSNDSALFILPDEGKMQDLEAKLTP-ETL 292
Query: 977 EVEETPCSPNG*LPSTCHGFPSPGDYKLHDILPHLGIKKVFT 1102
P + F DY+L DIL LGIKK+FT
Sbjct: 293 TRWRNSLQPRHIDELSLPRFSISSDYQLRDILSQLGIKKIFT 334
>ref|NP_001139774.1| serpin A3-6 [Bos taurus].
Length = 414
Score = 366 bits (940), Expect = e-101
Identities = 200/347 (57%), Positives = 240/347 (69%), Gaps = 5/347 (1%)
Frame = +2
Query: 77 MRAEGMSXXXXXXXXXXXXCSRVHCVPADDLASKTVTLKGQIKKLPAHNTAVVSSNTDFA 256
MR E +S CSRVHC+P + VT + Q K ++ SSNTDFA
Sbjct: 1 MRTERVSPLLALGILVAGLCSRVHCLP------ENVTPEEQHKVTSVDGHSLASSNTDFA 54
Query: 257 FSLYKQLALAERRENVIFSPLSVSIALAFLSLGARGPTLIELLEGLKFNLTKTPEAEIHQ 436
FSLYKQLAL + +NVIFSPLSVSIALAFLSLGA GPT+ E+LEGLKFNLT+TPE EIHQ
Sbjct: 55 FSLYKQLALKDPNKNVIFSPLSVSIALAFLSLGAHGPTVTEILEGLKFNLTETPETEIHQ 114
Query: 437 GFQHLLQALSQPSNLLQLNVGNAMFVDERLKLLDKFVQDARELYFSEVFSISFKDSDAAI 616
GFQHLLQ +QPSN LQL+VGNA+FV E LKLLDKF++DAR LY SE F +F+D +AA
Sbjct: 115 GFQHLLQTFNQPSNQLQLSVGNAIFVQEELKLLDKFIEDARVLYSSEAFPTNFRDPEAAK 174
Query: 617 EFINNYVKNKTKGKIVDLFKQLSPDTVLVLVNCIYFKAKWKMPFNPNFTTGADFHVSKNR 796
IN+YVKNKT+GKI +LFK LSP T LVLVN +YFKA+WK F+P T +FHVS N+
Sbjct: 175 SLINDYVKNKTQGKIEELFKDLSPRTELVLVNYVYFKAQWKTRFDPKHTEKTEFHVSDNK 234
Query: 797 TVRVPMMGITGRTVPYFRDQELACTVVELPYTSNDSALFILPDDGRMEDVESQAAPGDTE 976
TV VPMM + T PYFRD+EL CT+VEL YTSNDSALFILPD G+M+D+E++ P
Sbjct: 235 TVEVPMMTLDLET-PYFRDEELGCTLVELTYTSNDSALFILPDKGKMQDLEAKLTP---- 289
Query: 977 EVEETPCSPNG*LPSTCH-----GFPSPGDYKLHDILPHLGIKKVFT 1102
E N P H F +Y+L+D L +GIKK+FT
Sbjct: 290 --EMLTRWRNSLQPRRIHELYLPKFSIKSNYELNDTLSQMGIKKIFT 334
>ref|NP_001075213.1| serpin A3-5 [Bos taurus].
Length = 411
Score = 362 bits (928), Expect = e-100
Identities = 194/320 (60%), Positives = 238/320 (74%)
Frame = +2
Query: 143 VHCVPADDLASKTVTLKGQIKKLPAHNTAVVSSNTDFAFSLYKQLALAERRENVIFSPLS 322
VHC+P + V +K Q +++ +H A SSNTDFAFSLYKQLAL +NV+FSPLS
Sbjct: 22 VHCLP------ENVVVKDQRRRVDSHTLA--SSNTDFAFSLYKQLALKNPNKNVMFSPLS 73
Query: 323 VSIALAFLSLGARGPTLIELLEGLKFNLTKTPEAEIHQGFQHLLQALSQPSNLLQLNVGN 502
VS+ALAFLSLGARGPTL E+LEGLKFNLT+ E +IHQGFQHLLQAL++PSN LQL+VGN
Sbjct: 74 VSMALAFLSLGARGPTLTEILEGLKFNLTEIQETQIHQGFQHLLQALNRPSNQLQLSVGN 133
Query: 503 AMFVDERLKLLDKFVQDARELYFSEVFSISFKDSDAAIEFINNYVKNKTKGKIVDLFKQL 682
AMFV E LKLLDKF++DAR LY SE F +F+DS+AA IN+YVKNKT+GKI +LFK L
Sbjct: 134 AMFVQEELKLLDKFIEDARVLYSSEAFPTNFRDSEAARSLINDYVKNKTQGKIEELFKYL 193
Query: 683 SPDTVLVLVNCIYFKAKWKMPFNPNFTTGADFHVSKNRTVRVPMMGITGRTVPYFRDQEL 862
SP TVLVLVN IYFKA+WK F+P T A+FHVSKN+TV VPMM + T PYFRD+EL
Sbjct: 194 SPRTVLVLVNYIYFKAQWKTRFDPKHTEQAEFHVSKNKTVEVPMMTLDLET-PYFRDKEL 252
Query: 863 ACTVVELPYTSNDSALFILPDDGRMEDVESQAAPGDTEEVEETPCSPNG*LPSTCHGFPS 1042
C +VEL Y+SNDSALFILPD+G+M+D+E++ P +T P F
Sbjct: 253 GCMLVELTYSSNDSALFILPDEGKMQDLEAKLTP-ETLTRWRNSLQPRRIHELYLPKFSI 311
Query: 1043 PGDYKLHDILPHLGIKKVFT 1102
+Y+L+D L +GIKK+FT
Sbjct: 312 KSNYELNDTLSQMGIKKIFT 331
>ref|XP_001252647.3| PREDICTED: endopin 2B-like [Bos taurus].
Length = 417
Score = 361 bits (927), Expect = e-100
Identities = 198/342 (57%), Positives = 236/342 (69%)
Frame = +2
Query: 77 MRAEGMSXXXXXXXXXXXXCSRVHCVPADDLASKTVTLKGQIKKLPAHNTAVVSSNTDFA 256
MR E MS CSRVHC+P + VT + Q K ++ SSNTDFA
Sbjct: 1 MRTERMSPLLALGLLVSGFCSRVHCLP------ENVTPEEQHKGTSVDGHSLASSNTDFA 54
Query: 257 FSLYKQLALAERRENVIFSPLSVSIALAFLSLGARGPTLIELLEGLKFNLTKTPEAEIHQ 436
FSLYKQLAL + +NVIFSPLS+SIALAFLSLGA T+ E+LEGLKFNLT+TPE EIHQ
Sbjct: 55 FSLYKQLALKDPNKNVIFSPLSISIALAFLSLGAHDHTVTEILEGLKFNLTETPETEIHQ 114
Query: 437 GFQHLLQALSQPSNLLQLNVGNAMFVDERLKLLDKFVQDARELYFSEVFSISFKDSDAAI 616
GFQHLLQ +QPSN LQL+VGNAMFV E LKLLDKF +DA Y SEV S +FKDS+AA+
Sbjct: 115 GFQHLLQTFNQPSNQLQLSVGNAMFVSEELKLLDKFRKDAEAFYASEVLSTNFKDSEAAV 174
Query: 617 EFINNYVKNKTKGKIVDLFKQLSPDTVLVLVNCIYFKAKWKMPFNPNFTTGADFHVSKNR 796
+ IN YVKNKT GKI LF L T L+L+N I+FKA+WK PFNPN T ++FHVS+N
Sbjct: 175 KLINEYVKNKTHGKIEKLFNDLDVLTNLILLNYIFFKAQWKTPFNPNHTYESEFHVSQNE 234
Query: 797 TVRVPMMGITGRTVPYFRDQELACTVVELPYTSNDSALFILPDDGRMEDVESQAAPGDTE 976
V VPMM + T PYFRD+EL CT+VEL YTSNDSALFILPD+G+M+D+E++ P +T
Sbjct: 235 RVIVPMMTLYLET-PYFRDEELGCTLVELTYTSNDSALFILPDEGKMQDLEAKLTP-ETL 292
Query: 977 EVEETPCSPNG*LPSTCHGFPSPGDYKLHDILPHLGIKKVFT 1102
P + F DY+L DIL LGIKK+FT
Sbjct: 293 TRWRNSLQPRHIDELSLPRFSISSDYQLRDILSQLGIKKIFT 334
>ref|NP_001139773.1| serpin A3-2 [Bos taurus].
Length = 411
Score = 357 bits (916), Expect = 1e-98
Identities = 194/321 (60%), Positives = 233/321 (72%)
Frame = +2
Query: 143 VHCVPADDLASKTVTLKGQIKKLPAHNTAVVSSNTDFAFSLYKQLALAERRENVIFSPLS 322
VHC+P + V +K Q +++ H A SSNTDFAFSLYKQLAL +NVI SPLS
Sbjct: 22 VHCLP------ENVVVKDQHRRVDGHTLA--SSNTDFAFSLYKQLALKNPNKNVILSPLS 73
Query: 323 VSIALAFLSLGARGPTLIELLEGLKFNLTKTPEAEIHQGFQHLLQALSQPSNLLQLNVGN 502
VSIALAFLSLGARG TL E+LEGLKFNLT+ E EIH FQHLLQAL+QPSN LQL+VGN
Sbjct: 74 VSIALAFLSLGARGSTLTEILEGLKFNLTEIQEKEIHHSFQHLLQALNQPSNQLQLSVGN 133
Query: 503 AMFVDERLKLLDKFVQDARELYFSEVFSISFKDSDAAIEFINNYVKNKTKGKIVDLFKQL 682
AMFV E LKLLDKF++DA+ LY SE F +F+DS+AA IN+YVKNKT+GKI +LFK L
Sbjct: 134 AMFVQEELKLLDKFIEDAQVLYSSEAFPTNFRDSEAARSLINDYVKNKTQGKIEELFKYL 193
Query: 683 SPDTVLVLVNCIYFKAKWKMPFNPNFTTGADFHVSKNRTVRVPMMGITGRTVPYFRDQEL 862
SP T LVLVN IYFKA+WK PF+P T A+FHVS N+TV VPMM + T PYFRD+EL
Sbjct: 194 SPRTELVLVNYIYFKAQWKTPFDPKHTEQAEFHVSDNKTVEVPMMTLDLET-PYFRDEEL 252
Query: 863 ACTVVELPYTSNDSALFILPDDGRMEDVESQAAPGDTEEVEETPCSPNG*LPSTCHGFPS 1042
CT+VEL YTSNDSALFILPD+G+M D+E++ P +T P F
Sbjct: 253 GCTLVELTYTSNDSALFILPDEGKMRDLEAKLTP-ETLTRWRNSLQPRRIHELYLPKFSI 311
Query: 1043 PGDYKLHDILPHLGIKKVFTH 1105
+Y+L+DIL LGI+K+F +
Sbjct: 312 KSNYELNDILSQLGIRKIFAN 332
>ref|NP_777193.2| serpin A3-1 precursor [Bos taurus].
Length = 411
Score = 355 bits (911), Expect = 4e-98
Identities = 193/321 (60%), Positives = 232/321 (72%)
Frame = +2
Query: 143 VHCVPADDLASKTVTLKGQIKKLPAHNTAVVSSNTDFAFSLYKQLALAERRENVIFSPLS 322
VHC+P + V +K Q +++ H A SSNTDFAFSLYKQL L +NVI SPLS
Sbjct: 22 VHCLP------ENVVVKDQHRRVDGHTLA--SSNTDFAFSLYKQLPLKNPNKNVILSPLS 73
Query: 323 VSIALAFLSLGARGPTLIELLEGLKFNLTKTPEAEIHQGFQHLLQALSQPSNLLQLNVGN 502
VSIALAFLSLGARG TL E+LEGLKFNLT+ E EIH FQHLLQAL+QPSN LQL+VGN
Sbjct: 74 VSIALAFLSLGARGSTLTEILEGLKFNLTEIQEKEIHHSFQHLLQALNQPSNQLQLSVGN 133
Query: 503 AMFVDERLKLLDKFVQDARELYFSEVFSISFKDSDAAIEFINNYVKNKTKGKIVDLFKQL 682
AMFV E LKLLDKF++DA+ LY SE F +F+DS+AA IN+YVKNKT+GKI +LFK L
Sbjct: 134 AMFVQEELKLLDKFIEDAQVLYSSEAFPTNFRDSEAARSLINDYVKNKTQGKIEELFKYL 193
Query: 683 SPDTVLVLVNCIYFKAKWKMPFNPNFTTGADFHVSKNRTVRVPMMGITGRTVPYFRDQEL 862
SP T LVLVN IYFKA+WK PF+P T A+FHVS N+TV VPMM + T PYFRD+EL
Sbjct: 194 SPRTELVLVNYIYFKAQWKTPFDPKHTEQAEFHVSDNKTVEVPMMTLDLET-PYFRDEEL 252
Query: 863 ACTVVELPYTSNDSALFILPDDGRMEDVESQAAPGDTEEVEETPCSPNG*LPSTCHGFPS 1042
CT+VEL YTSNDSALFILPD+G+M D+E++ P +T P F
Sbjct: 253 GCTLVELTYTSNDSALFILPDEGKMRDLEAKLTP-ETLTRWRNSLQPRRIHELYLPKFSI 311
Query: 1043 PGDYKLHDILPHLGIKKVFTH 1105
+Y+L+DIL LGI+K+F +
Sbjct: 312 KSNYELNDILSQLGIRKIFAN 332
>ref|NP_001033293.1| serpin A3-3 [Bos taurus].
Length = 411
Score = 354 bits (908), Expect = 9e-98
Identities = 192/325 (59%), Positives = 234/325 (72%), Gaps = 5/325 (1%)
Frame = +2
Query: 143 VHCVPADDLASKTVTLKGQIKKLPAHNTAVVSSNTDFAFSLYKQLALAERRENVIFSPLS 322
VHC+P + V +K + +++ H A SSNTDFAFSLYKQLAL +NV+FSPLS
Sbjct: 22 VHCLP------ENVVVKDRHRRVDGHTLA--SSNTDFAFSLYKQLALKNPNKNVMFSPLS 73
Query: 323 VSIALAFLSLGARGPTLIELLEGLKFNLTKTPEAEIHQGFQHLLQALSQPSNLLQLNVGN 502
VS+ALAFLSLGARGPTL E+LEGLKFNLT+ E +IHQGFQHLLQAL++P N LQL+VGN
Sbjct: 74 VSMALAFLSLGARGPTLTEILEGLKFNLTEIQETQIHQGFQHLLQALNRPRNQLQLSVGN 133
Query: 503 AMFVDERLKLLDKFVQDARELYFSEVFSISFKDSDAAIEFINNYVKNKTKGKIVDLFKQL 682
AMFV E LKLLDKF++DAR LY SE F +F+D +AA IN+YVKNKT+GKI +LFK L
Sbjct: 134 AMFVQEELKLLDKFIEDARVLYSSEAFPTNFRDPEAAKSLINDYVKNKTQGKIEELFKDL 193
Query: 683 SPDTVLVLVNCIYFKAKWKMPFNPNFTTGADFHVSKNRTVRVPMMGITGRTVPYFRDQEL 862
SP T LVLVN +YFKA+WK F+P T A+FHVS N+TV VPMM + T PYFRD+EL
Sbjct: 194 SPRTELVLVNYVYFKAQWKTRFDPKHTEQAEFHVSDNKTVEVPMMTLDLET-PYFRDEEL 252
Query: 863 ACTVVELPYTSNDSALFILPDDGRMEDVESQAAPGDTEEVEETPCSPNG*LPSTCH---- 1030
CT+VEL YTSNDSALFILPD G+M+D+E++ P E N P H
Sbjct: 253 GCTLVELTYTSNDSALFILPDKGKMQDLEAKLTP------EMLTRWRNSLQPRRIHELYL 306
Query: 1031 -GFPSPGDYKLHDILPHLGIKKVFT 1102
F +Y+L+D L +GIKK+FT
Sbjct: 307 PKFSIKSNYELNDTLSQMGIKKIFT 331
>ref|XP_001787316.2| PREDICTED: endopin 2C-like [Bos taurus].
Length = 411
Score = 352 bits (903), Expect(2) = 1e-97
Identities = 184/296 (62%), Positives = 219/296 (73%)
Frame = +2
Query: 77 MRAEGMSXXXXXXXXXXXXCSRVHCVPADDLASKTVTLKGQIKKLPAHNTAVVSSNTDFA 256
MR E MS CSRVHC+P + VT + Q K ++ SSNTDFA
Sbjct: 1 MRTERMSPLLALGLLVSGLCSRVHCLP------ENVTPEEQHKVTSVDGHSLASSNTDFA 54
Query: 257 FSLYKQLALAERRENVIFSPLSVSIALAFLSLGARGPTLIELLEGLKFNLTKTPEAEIHQ 436
FSLYKQLAL + +NVIFSPLS+SIALAFLSLGA GPT+ E+LEGLKFNLT+TPE EIHQ
Sbjct: 55 FSLYKQLALKDPNKNVIFSPLSISIALAFLSLGAHGPTVTEILEGLKFNLTETPETEIHQ 114
Query: 437 GFQHLLQALSQPSNLLQLNVGNAMFVDERLKLLDKFVQDARELYFSEVFSISFKDSDAAI 616
GFQHLLQ +QPSN LQL+VGNA+FV E LKLLDKF +DA Y SEV SI+FKDS+AA+
Sbjct: 115 GFQHLLQTFNQPSNQLQLSVGNAIFVPEELKLLDKFRKDAEAFYASEVLSINFKDSEAAV 174
Query: 617 EFINNYVKNKTKGKIVDLFKQLSPDTVLVLVNCIYFKAKWKMPFNPNFTTGADFHVSKNR 796
+ IN YVKNKT GKI L L T L+L+N I+FKA+WK PFNPN T ++FHVSKN
Sbjct: 175 KLINEYVKNKTHGKIEKLLNDLDVLTNLILLNYIFFKAQWKTPFNPNHTYESEFHVSKNE 234
Query: 797 TVRVPMMGITGRTVPYFRDQELACTVVELPYTSNDSALFILPDDGRMEDVESQAAP 964
V+VPMM + T PYFRD+EL CT+VEL YTSNDSALFILPD+G+M+D+E++ P
Sbjct: 235 RVKVPMMTLRLET-PYFRDEELGCTLVELTYTSNDSALFILPDEGKMQDLEAKLTP 289
Score = 24.3 bits (51), Expect(2) = 1e-97
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +3
Query: 948 KAKLLPETLRRWK 986
+AKL PETL RW+
Sbjct: 284 EAKLTPETLTRWR 296
>ref|NP_001012283.2| serpin A3-7 [Bos taurus].
Length = 417
Score = 351 bits (901), Expect = 6e-97
Identities = 196/347 (56%), Positives = 233/347 (67%), Gaps = 5/347 (1%)
Frame = +2
Query: 77 MRAEGMSXXXXXXXXXXXXCSRVHCVPADDLASKTVTLKGQIKKLPAHNTAVVSSNTDFA 256
MR E S CSRVHC+P + VT + Q K ++ SSNTDFA
Sbjct: 1 MRTERTSFLLALGLLVSGFCSRVHCLP------ENVTPEEQHKGTSVDGHSLASSNTDFA 54
Query: 257 FSLYKQLALAERRENVIFSPLSVSIALAFLSLGARGPTLIELLEGLKFNLTKTPEAEIHQ 436
FSLYKQLAL + +NVIFSPLS+SIALAFLSLGA T+ E+LEGLKFNLT+TPE EIHQ
Sbjct: 55 FSLYKQLALKDPNKNVIFSPLSISIALAFLSLGAHDHTVTEILEGLKFNLTETPETEIHQ 114
Query: 437 GFQHLLQALSQPSNLLQLNVGNAMFVDERLKLLDKFVQDARELYFSEVFSISFKDSDAAI 616
GFQHLLQ +QPSN LQL+VGNAMFV E LKLLDKF +DA Y SEV S +FKDS+A +
Sbjct: 115 GFQHLLQTFNQPSNQLQLSVGNAMFVSEELKLLDKFRKDAEAFYASEVLSTNFKDSEADV 174
Query: 617 EFINNYVKNKTKGKIVDLFKQLSPDTVLVLVNCIYFKAKWKMPFNPNFTTGADFHVSKNR 796
+ IN YVKNKT GKI LF L T L+L+N I+FKA+WK PFNPN T ++FHVS+N
Sbjct: 175 KLINEYVKNKTHGKIEKLFNDLDVLTNLILLNYIFFKAQWKTPFNPNHTYESEFHVSQNE 234
Query: 797 TVRVPMMGITGRTVPYFRDQELACTVVELPYTSNDSALFILPDDGRMEDVESQAAPGDTE 976
V VPMM + T PYFRD+EL CT+VEL +TSNDSALFILPD+G+M+D+E++ P
Sbjct: 235 RVIVPMMTLYLET-PYFRDEELGCTLVELTHTSNDSALFILPDEGKMQDLEAKLTP---- 289
Query: 977 EVEETPCSPNG*LPSTCHGFPSP-----GDYKLHDILPHLGIKKVFT 1102
E N P H P Y+L DIL LGIKK+FT
Sbjct: 290 --ETLTRWRNSLQPRLIHRLRLPRFSISSHYQLKDILSQLGIKKIFT 334
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 43,396,926
Number of extensions: 1272463
Number of successful extensions: 7261
Number of sequences better than 1.0e-05: 87
Number of HSP's gapped: 7004
Number of HSP's successfully gapped: 92
Length of query: 369
Length of database: 17,681,374
Length adjustment: 104
Effective length of query: 265
Effective length of database: 14,240,222
Effective search space: 3773658830
Effective search space used: 3773658830
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-000796
(1107 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_537546.2| PREDICTED: similar to Alpha-1-antichymotrypsin ... 333 1e-91
Alignment gi|NP_001073578.1| serpin peptidase inhibitor, clade A (alpha-1... 234 1e-61
Alignment gi|XP_537544.2| PREDICTED: similar to serine (or cysteine) prot... 226 2e-59
Alignment gi|XP_547960.2| PREDICTED: similar to Corticosteroid-binding gl... 221 7e-58
Alignment gi|XP_855206.1| PREDICTED: similar to serine (or cysteine) prot... 219 4e-57
Alignment gi|XP_538128.1| PREDICTED: similar to Thyroxine-binding globuli... 218 6e-57
Alignment gi|XP_547962.2| PREDICTED: similar to serine (or cysteine) prot... 214 9e-56
Alignment gi|XP_537545.1| PREDICTED: similar to serine (or cysteine) prot... 207 1e-53
Alignment gi|XP_855210.1| PREDICTED: similar to serine (or cysteine) prot... 206 2e-53
Alignment gi|XP_855208.1| PREDICTED: similar to Corticosteroid-binding gl... 163 3e-40
>ref|XP_537546.2| PREDICTED: similar to Alpha-1-antichymotrypsin precursor (ACT) [Canis
familiaris].
Length = 421
Score = 333 bits (855), Expect = 1e-91
Identities = 181/328 (55%), Positives = 229/328 (69%), Gaps = 4/328 (1%)
Frame = +2
Query: 134 CSRVHCVPADDLASKTVTLKGQIKKLPAHNTAVVSSNTDFAFSLYKQLALAERRENVIFS 313
C VHC+P + VT + + ++ + SSNTDF SLYK+LA +NVIFS
Sbjct: 15 CPTVHCLPEGMRDPENVTQEDLPNETSENSLRLASSNTDFTLSLYKELASKSPDKNVIFS 74
Query: 314 PLSVSIALAFLSLGARGPTLIELLEGLKFNLTKTPEAEIHQGFQHLLQALSQPSNLLQLN 493
P+S+SIALAFLSLGA+G T E+LEGLKFNLT+ P+ EIH+GFQHLL+AL QPS+ LQL+
Sbjct: 75 PMSISIALAFLSLGAQGTTQTEILEGLKFNLTEIPDREIHRGFQHLLRALHQPSSELQLS 134
Query: 494 VGNAMFVDERLKLLDKFVQDARELYFSEVFSISFKDSDAAIEFINNYVKNKTKGKIVDLF 673
VGNAMFV E+LKLL+ FV+DAR LY SE FS +F++S AA + IN+YVKN+T+GKIVDL
Sbjct: 135 VGNAMFVGEQLKLLETFVEDARALYASEAFSTNFQNSAAAEKLINDYVKNRTQGKIVDLV 194
Query: 674 KQLSPDTVLVLVNCIYFKAKWKMPFNPNFTTGADFHVSKNRTVRVPMMGITGRTVPYFRD 853
K L T +VLVN I+ KAKWK PF+P T + F VSK+R+V+VPMM + VPYFRD
Sbjct: 195 KDLDLHTAVVLVNYIFLKAKWKTPFDPRDTFKSKFQVSKSRSVKVPMMNLEDVWVPYFRD 254
Query: 854 QELACTVVELPYTSNDSALFILPDDGRMEDVESQAAPGD----TEEVEETPCSPNG*LPS 1021
L+CTVVEL YTSNDSALF+LPD+GRME VE+ P T ++ N LP
Sbjct: 255 DALSCTVVELQYTSNDSALFVLPDEGRMEAVEAMLLPETLRRWTHSLQMRRID-NLYLPK 313
Query: 1022 TCHGFPSPGDYKLHDILPHLGIKKVFTH 1105
F Y L D+LP LG+++VFT+
Sbjct: 314 ----FSISSSYNLEDVLPQLGVREVFTN 337
>ref|NP_001073578.1| serpin peptidase inhibitor, clade A (alpha-1 antiproteinase,
antitrypsin), member 1 [Canis lupus familiaris].
Length = 415
Score = 234 bits (596), Expect = 1e-61
Identities = 128/300 (42%), Positives = 181/300 (60%), Gaps = 3/300 (1%)
Frame = +2
Query: 212 PAHNTA---VVSSNTDFAFSLYKQLALAERRENVIFSPLSVSIALAFLSLGARGPTLIEL 382
P H A + + DFAFSLY+Q+A N+ FSP+S++ A A LSLG +G T ++
Sbjct: 38 PEHQPACHKIAPNLADFAFSLYRQVAQESNTTNIFFSPVSIATAFAMLSLGTKGDTHTQI 97
Query: 383 LEGLKFNLTKTPEAEIHQGFQHLLQALSQPSNLLQLNVGNAMFVDERLKLLDKFVQDARE 562
++GL FNLT+ E E+HQGF LL L+QP N LQL G+ +F+++ +KLL+KF++D R
Sbjct: 98 MQGLGFNLTERAEREVHQGFHQLLSILNQPDNQLQLTTGSGLFINDTIKLLNKFLEDVRN 157
Query: 563 LYFSEVFSISFKDSDAAIEFINNYVKNKTKGKIVDLFKQLSPDTVLVLVNCIYFKAKWKM 742
LY SE F+I+F+ ++ A + INNYV+ T+GKIVDL K L DTV LVN I+FK KW+
Sbjct: 158 LYHSEAFTINFRHTEEAKKQINNYVEKGTQGKIVDLVKDLDEDTVFALVNYIFFKGKWEK 217
Query: 743 PFNPNFTTGADFHVSKNRTVRVPMMGITGRTVPYFRDQELACTVVELPYTSNDSALFILP 922
PF TT DFHV ++ TV+VPMM G L+ V+ + Y N +A FILP
Sbjct: 218 PFEVEHTTEEDFHVDEHTTVKVPMMSRLG-MFDIQHCATLSSWVLLMEYVGNATAFFILP 276
Query: 923 DDGRMEDVESQAAPGDTEEVEETPCSPNG*LPSTCHGFPSPGDYKLHDILPHLGIKKVFT 1102
D+G+M+ +ES+ + E + + L G Y L +L +GI KVF+
Sbjct: 277 DEGKMQHLESKLTKEVLAKFLEKRYARSASL--RLPKLSISGTYDLKSVLSKMGITKVFS 334
>ref|XP_537544.2| PREDICTED: similar to serine (or cysteine) proteinase inhibitor,
clade A (alpha-1 antiproteinase, antitrypsin), member 9
[Canis familiaris].
Length = 418
Score = 226 bits (577), Expect = 2e-59
Identities = 135/320 (42%), Positives = 181/320 (56%), Gaps = 1/320 (0%)
Frame = +2
Query: 143 VHCVPADDLASKTVTLKGQIKKLPAHNTAVVSSNTDFAFSLYKQLALAERRENVIFSPLS 322
++CVP SK + A + SSNTDFAF LY++L L +NV FSPLS
Sbjct: 18 IYCVPPPRAPSKGSPCMSSTRSTAASQLS--SSNTDFAFRLYQRLILKTPDQNVFFSPLS 75
Query: 323 VSIALAFLSLGARGPTLIELLEGLKFNLTKTPEAEIHQGFQHLLQALSQPSNLLQLNVGN 502
VS LA LSLGAR T ++L+GL FNLT PE+ IHQ FQHLL +L P L L +G+
Sbjct: 76 VSACLAMLSLGARSATKTQILQGLGFNLTHLPESSIHQAFQHLLHSLRVPGKDLDLRMGS 135
Query: 503 AMFVDERLKLLDKFVQDARELYFSEVFSISFKDSDAAIEFINNYVKNKTKGKIVDLFKQL 682
+F+ + L L F+ D + LY S+VFS F S A E IN+YV+ +TKGK+V+L + L
Sbjct: 136 VLFIKKELWLQTNFLDDVKRLYESKVFSTDFSSSSTAREKINSYVEKETKGKVVNLIQSL 195
Query: 683 SPDTVLVLVNCIYFKAKWKMPFNPNFTT-GADFHVSKNRTVRVPMMGITGRTVPYFRDQE 859
P TV+VLVN I+FK KW+ PFNP +T+ + F V K TV+VPMM + D E
Sbjct: 196 EPLTVMVLVNHIFFKGKWEKPFNPGYTSKSSPFLVGKRTTVKVPMMHQV-EEFAFGVDAE 254
Query: 860 LACTVVELPYTSNDSALFILPDDGRMEDVESQAAPGDTEEVEETPCSPNG*LPSTCHGFP 1039
L C+V+ + Y + +A F+LP G+M +E QA T + + F
Sbjct: 255 LKCSVLRMDYDEDTAAFFVLPGQGKMRQLE-QALSSRTLR-KWNHLLQKRWIEVFIPKFS 312
Query: 1040 SPGDYKLHDILPHLGIKKVF 1099
Y L ILP +GI+ F
Sbjct: 313 LSASYDLETILPKMGIRDAF 332
>ref|XP_547960.2| PREDICTED: similar to Corticosteroid-binding globulin precursor
(CBG) (Transcortin) [Canis familiaris].
Length = 404
Score = 221 bits (564), Expect = 7e-58
Identities = 109/235 (46%), Positives = 154/235 (65%)
Frame = +2
Query: 242 NTDFAFSLYKQLALAERRENVIFSPLSVSIALAFLSLGARGPTLIELLEGLKFNLTKTPE 421
N DFAF+LY+ L + +NV SP+S+S+ALA LSLGA G T ++LL+GL FNLTK E
Sbjct: 42 NVDFAFNLYRHLVASSPDKNVFISPVSISMALAMLSLGACGYTRVQLLQGLGFNLTKMSE 101
Query: 422 AEIHQGFQHLLQALSQPSNLLQLNVGNAMFVDERLKLLDKFVQDARELYFSEVFSISFKD 601
AEIHQGF+HL L + +L++ +GNA+F+D L+LL+ F D + Y E ++ F+D
Sbjct: 102 AEIHQGFRHLRHLLEKSDTMLEMTMGNALFLDRSLELLEPFSADTKHYYDLEAWATDFQD 161
Query: 602 SDAAIEFINNYVKNKTKGKIVDLFKQLSPDTVLVLVNCIYFKAKWKMPFNPNFTTGADFH 781
A IN Y+KNKT+GKIVDL +L +++LVN I+FK W+ PF+P T DF+
Sbjct: 162 GTGASRQINEYIKNKTQGKIVDLLSKLDSSAMVILVNYIFFKGTWEHPFDPESTREEDFY 221
Query: 782 VSKNRTVRVPMMGITGRTVPYFRDQELACTVVELPYTSNDSALFILPDDGRMEDV 946
V++ VRVP M T+ + DQ L C +V+L Y N + FILP++G+M+ V
Sbjct: 222 VNETTVVRVPTM-FQSSTIKHLNDQVLPCQLVQLEYMGNGTVFFILPEEGKMDTV 275
>ref|XP_855206.1| PREDICTED: similar to serine (or cysteine) proteinase inhibitor,
clade A (alpha-1 antiproteinase, antitrypsin), member 11
[Canis familiaris].
Length = 422
Score = 219 bits (558), Expect = 4e-57
Identities = 127/299 (42%), Positives = 187/299 (62%), Gaps = 3/299 (1%)
Frame = +2
Query: 212 PAHNTAVVSSNTDFAFSLYKQLALAERRENVIFSPLSVSIALAFLSLGARGPTLIELLEG 391
PA++ + + T+FA LYKQLA AE N+ FSP+S+S +LA LSLGA+ T ++LEG
Sbjct: 45 PAYHK-ITPTITNFALHLYKQLA-AETSGNIFFSPVSISTSLALLSLGAQVNTSTQILEG 102
Query: 392 LKFNLTKTPEAEIHQGFQHLLQALSQPSNLLQLNVGNAMFVDERLKLLDKFVQDARELYF 571
L FNLT+TPEA+IH+GFQ L+ L PS+ L+L VGN++F+D++LK F+ RELY
Sbjct: 103 LGFNLTETPEADIHRGFQSLIHTLDLPSSKLELKVGNSLFLDKQLKPQQHFLDTIRELYG 162
Query: 572 SEVFSISFKDSDAAIEFINNYVKNKTKGKIVDLFKQLSPDTVLVLVNCIYFKAKWKMPFN 751
+ FS +F DS IN YV+ +T G++ D ++ + DT++VL+N I+FKAKWK PF+
Sbjct: 163 AFAFSANFTDSATTRRQINEYVRKQTYGQVADGLQEFTQDTLMVLLNYIFFKAKWKHPFS 222
Query: 752 PNFTTGAD-FHVSKNRTVRVPMMGITGRTVPYFRDQELACTVVELPYTSNDSALFILPDD 928
T + F V++ ++ +PMM + DQE+ACTV+++ Y+ N AL ILPD
Sbjct: 223 RYQTQKQESFSVNERTSLHIPMMH-QKEMHRFLYDQEMACTVLQIEYSGNAMALLILPDP 281
Query: 929 GRMEDVESQAAPGDTEEVEE--TPCSPNG*LPSTCHGFPSPGDYKLHDILPHLGIKKVF 1099
G+ME VE+ P + ++ P + LP F G Y L +ILP +G+ +F
Sbjct: 282 GKMEQVEAALQPETLRKWDQWLLPSLLDLHLPR----FSISGTYNLEEILPLIGLTNIF 336
>ref|XP_538128.1| PREDICTED: similar to Thyroxine-binding globulin precursor
(T4-binding globulin) [Canis familiaris].
Length = 414
Score = 218 bits (556), Expect = 6e-57
Identities = 119/272 (43%), Positives = 173/272 (63%), Gaps = 3/272 (1%)
Frame = +2
Query: 143 VHCVPADDLASKTVTLKGQIKKLPAHNTAVVSSNTDFAFSLYKQLALAERRENVIFSPLS 322
+HC + K +T K + + S N DFAF+LY++ + N+ FSP+S
Sbjct: 14 LHCASSIRSEGKVITCNSPPKNATFYKMS--SINADFAFNLYRRFTVETPDRNIFFSPVS 71
Query: 323 VSIALAFLSLGARGPTLIELLEGLKFNLTKTPEAEIHQGFQHLLQALSQPSNLLQLNVGN 502
+S ALA LS GA T I++LE L FNLT TP AEI QGFQHL+ +L+ P L+L +GN
Sbjct: 72 ISAALAMLSFGACYSTQIQILESLGFNLTDTPMAEIQQGFQHLICSLNIPKKELELQMGN 131
Query: 503 AMFVDERLKLLDKFVQDARELYFSEVFSISFKDSDAAIEFINNYVKNKTKGKIVDLFKQL 682
+F+ ++LK L +F+ D + LY +EVFS F + AA + IN++V+ +TKG++V L + L
Sbjct: 132 TLFIGKQLKPLAQFLDDVKSLYATEVFSTDFSNVSAAQQLINSHVEKQTKGEVVGLIQDL 191
Query: 683 SPDTVLVLVNCIYFKAKWKMPFNPNFT-TGADFHVSKNRTVRVPMMGITGRTVPYFR--D 853
P+T++VLVN I+FKA+W PF+P+ T G F V K TV+VPMM + Y+ D
Sbjct: 192 KPNTIMVLVNYIHFKAQWANPFDPSKTEEGFSFSVDKTTTVKVPMM---HQMEQYYHLVD 248
Query: 854 QELACTVVELPYTSNDSALFILPDDGRMEDVE 949
EL CTV+++ Y+ N ALF+LP +G++E VE
Sbjct: 249 TELNCTVLQMDYSKNALALFVLPKEGQIEWVE 280
>ref|XP_547962.2| PREDICTED: similar to serine (or cysteine) proteinase inhibitor,
clade A (alpha-1 antiproteinase, antitrypsin), member 4
[Canis familiaris].
Length = 417
Score = 214 bits (546), Expect = 9e-56
Identities = 115/291 (39%), Positives = 170/291 (58%)
Frame = +2
Query: 230 VVSSNTDFAFSLYKQLALAERRENVIFSPLSVSIALAFLSLGARGPTLIELLEGLKFNLT 409
+ NT FA Y +A N+ FSPLS+S + A LSLGAR + ++LEGL FNLT
Sbjct: 45 IAPGNTAFALHFYHLMASQSPGSNIFFSPLSISASYAMLSLGARSHSKTQILEGLGFNLT 104
Query: 410 KTPEAEIHQGFQHLLQALSQPSNLLQLNVGNAMFVDERLKLLDKFVQDARELYFSEVFSI 589
+ E++IH+GFQHLL L P + L++++G+ +F+ + L +L +F+ D+ Y S++F
Sbjct: 105 EVSESDIHRGFQHLLHTLHLPDDRLEMHMGSTLFLSQDLLILPEFLNDSVAFYDSKLFLT 164
Query: 590 SFKDSDAAIEFINNYVKNKTKGKIVDLFKQLSPDTVLVLVNCIYFKAKWKMPFNPNFTTG 769
+F D + IN+++K +T+GKIVDL +L+ D +VLVN IYFKA W+ PF P+ TT
Sbjct: 165 NFHDPVGTTQLINDHIKEETQGKIVDLVSKLNTDIAMVLVNYIYFKALWEKPFQPSMTTT 224
Query: 770 ADFHVSKNRTVRVPMMGITGRTVPYFRDQELACTVVELPYTSNDSALFILPDDGRMEDVE 949
DFHV +N V+VPMM Y D+ L C+V+ + Y N +A FILP+ G+M+ VE
Sbjct: 225 QDFHVDENTVVQVPMMLQDTAHHWYLNDRYLPCSVLRMDYKGNMTAFFILPNRGKMKQVE 284
Query: 950 SQAAPGDTEEVEETPCSPNG*LPSTCHGFPSPGDYKLHDILPHLGIKKVFT 1102
P L F G Y+L++ILP +G +F+
Sbjct: 285 EALTPEMLTRWNRLLQKRK--LELHFPKFSISGSYQLNEILPKMGFVDLFS 333
>ref|XP_537545.1| PREDICTED: similar to serine (or cysteine) proteinase inhibitor,
clade A (alpha-1 antiproteinase, antitrypsin), member 5
[Canis familiaris].
Length = 407
Score = 207 bits (527), Expect = 1e-53
Identities = 121/304 (39%), Positives = 176/304 (57%)
Frame = +2
Query: 191 KGQIKKLPAHNTAVVSSNTDFAFSLYKQLALAERRENVIFSPLSVSIALAFLSLGARGPT 370
K ++K+ P +T V ++ DFAF LY+ LA A +N+ FSPLS+S LA LSLGA T
Sbjct: 28 KKRVKEPPVAST-VAPASRDFAFDLYRALATAAPDQNIFFSPLSISTTLAMLSLGAGSST 86
Query: 371 LIELLEGLKFNLTKTPEAEIHQGFQHLLQALSQPSNLLQLNVGNAMFVDERLKLLDKFVQ 550
+++LEGL + + E +H+ LL +QP +QL++GNA+F+ ++L D F+Q
Sbjct: 87 KVQILEGLGLHPQEGLEEALHRRIHQLLWDFAQPREDIQLSLGNALFISPTVRLQDTFLQ 146
Query: 551 DARELYFSEVFSISFKDSDAAIEFINNYVKNKTKGKIVDLFKQLSPDTVLVLVNCIYFKA 730
+ LY ++ F +F D A + IN+YV +TKGKIVDL K L +V+VN I+FKA
Sbjct: 147 AVKMLYLADTFPTNFGDPAGAQKQINDYVAKQTKGKIVDLAKDLDSTEAMVMVNYIFFKA 206
Query: 731 KWKMPFNPNFTTGADFHVSKNRTVRVPMMGITGRTVPYFRDQELACTVVELPYTSNDSAL 910
KW+ FN T DFHV+ V+VPMM Y+ D+ L+C VV +PY N +AL
Sbjct: 207 KWETGFNHKSTRKQDFHVTSEMVVQVPMMKQEDHYY-YYVDRNLSCRVVGVPYRGNATAL 265
Query: 911 FILPDDGRMEDVESQAAPGDTEEVEETPCSPNG*LPSTCHGFPSPGDYKLHDILPHLGIK 1090
F+LP +G+M +E+ + ++ + L F G Y+L +LP LGIK
Sbjct: 266 FVLPGEGQMGQLENGMSEKTLKKWLKMFTKRQ--LELYLPKFSIEGSYQLDKVLPTLGIK 323
Query: 1091 KVFT 1102
VFT
Sbjct: 324 DVFT 327
>ref|XP_855210.1| PREDICTED: similar to serine (or cysteine) proteinase inhibitor,
clade A (alpha-1 antiproteinase, antitrypsin), member 12
[Canis familiaris].
Length = 414
Score = 206 bits (525), Expect = 2e-53
Identities = 116/305 (38%), Positives = 183/305 (60%), Gaps = 2/305 (0%)
Frame = +2
Query: 191 KGQIKKLPAHNTA--VVSSNTDFAFSLYKQLALAERRENVIFSPLSVSIALAFLSLGARG 364
K QI+ A ++ NTDF LY++LA R+N+ FSPLS+S A + LSLGA+
Sbjct: 33 KSQIQSWKGMKAAEGLIKRNTDFGCKLYRKLASNSPRKNIFFSPLSISAAFSMLSLGAQD 92
Query: 365 PTLIELLEGLKFNLTKTPEAEIHQGFQHLLQALSQPSNLLQLNVGNAMFVDERLKLLDKF 544
TL E+ +G FN PE +IH+GF +L+ ++Q S L+L++ N +F+D++L+ KF
Sbjct: 93 STLDEIKQG--FNFRNMPERDIHEGFHYLIYRMNQGSQDLELHLRNTLFIDQKLQPEKKF 150
Query: 545 VQDARELYFSEVFSISFKDSDAAIEFINNYVKNKTKGKIVDLFKQLSPDTVLVLVNCIYF 724
+ + + LY ++ +F++ + IN+YV KT+GKI +L K + P TV++L NCI+F
Sbjct: 151 LTNVKNLYSADTVPTNFQNLGDTRKQINDYVSQKTQGKINNLIKNIDPGTVMLLTNCIFF 210
Query: 725 KAKWKMPFNPNFTTGADFHVSKNRTVRVPMMGITGRTVPYFRDQELACTVVELPYTSNDS 904
+A+W+ F+P T DF + N+ V+VPMM G D++L+CT++E+PY S
Sbjct: 211 RARWQHEFDPKITKEEDFFLDGNQRVKVPMM-FRGGMYETGYDEQLSCTILEMPYQGTIS 269
Query: 905 ALFILPDDGRMEDVESQAAPGDTEEVEETPCSPNG*LPSTCHGFPSPGDYKLHDILPHLG 1084
A FILPD+G+M+ VE +A DT + + + + + F G+Y L L +LG
Sbjct: 270 ATFILPDEGKMKTVE-EALKADTFDRWKKLITRRV-VDVSLPRFSITGNYDLKRTLSYLG 327
Query: 1085 IKKVF 1099
I K+F
Sbjct: 328 ITKIF 332
>ref|XP_855208.1| PREDICTED: similar to Corticosteroid-binding globulin precursor (CBG)
(Transcortin) [Canis familiaris].
Length = 471
Score = 163 bits (412), Expect = 3e-40
Identities = 101/297 (34%), Positives = 152/297 (51%)
Frame = +2
Query: 212 PAHNTAVVSSNTDFAFSLYKQLALAERRENVIFSPLSVSIALAFLSLGARGPTLIELLEG 391
P H+ + + N FA L+K L + R+N+IFSPLS+S + A LSLG R TL LLEG
Sbjct: 93 PVHHK-IEAGNKAFAHKLFKTLLMEHPRKNIIFSPLSISASFAMLSLGTRSTTLTNLLEG 151
Query: 392 LKFNLTKTPEAEIHQGFQHLLQALSQPSNLLQLNVGNAMFVDERLKLLDKFVQDARELYF 571
L F+L ++H GFQ ++Q L Q + L + +F+D K+ F+ D + +Y
Sbjct: 152 LGFDLKVIKVWDVHHGFQSVIQMLKQLNRAGHLMHRDMLFIDSNRKINSPFLWDTQAMYD 211
Query: 572 SEVFSISFKDSDAAIEFINNYVKNKTKGKIVDLFKQLSPDTVLVLVNCIYFKAKWKMPFN 751
I F+D + IN++V KT + +L L+P T L LV+ ++FK W+M F+
Sbjct: 212 VRARMIDFRDVVKTKKQINHFVAEKTHKRTKELITSLNPHTFLFLVDYVFFKGTWEMAFH 271
Query: 752 PNFTTGADFHVSKNRTVRVPMMGITGRTVPYFRDQELACTVVELPYTSNDSALFILPDDG 931
N DF V K+ TV V M+ TG+ + Y R +EL T+V++P+ N S + +LPD G
Sbjct: 272 SNLMHKEDFFVDKHTTVPVDMIWKTGQMI-YSRSEELFATMVKIPFVGNMSIVLVLPDVG 330
Query: 932 RMEDVESQAAPGDTEEVEETPCSPNG*LPSTCHGFPSPGDYKLHDILPHLGIKKVFT 1102
+ + + + S + F L ILP +GI VFT
Sbjct: 331 QPDSAVKEIV---VQRATLLQSSNMRWVHIIMPKFKISSKIDLKKILPKMGISNVFT 384
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 45,401,773
Number of extensions: 1320736
Number of successful extensions: 7115
Number of sequences better than 1.0e-05: 45
Number of HSP's gapped: 6976
Number of HSP's successfully gapped: 50
Length of query: 369
Length of database: 18,874,504
Length adjustment: 104
Effective length of query: 265
Effective length of database: 15,407,560
Effective search space: 4083003400
Effective search space used: 4083003400
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-000796
(1107 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001076.2| alpha-1-antichymotrypsin precursor [Homo sapien... 314 8e-86
Alignment gi|NP_000615.3| plasma serine protease inhibitor [Homo sapiens]. 234 1e-61
Alignment gi|NP_001002236.1| alpha-1-antitrypsin precursor [Homo sapiens]. 234 1e-61
Alignment gi|NP_001002235.1| alpha-1-antitrypsin precursor [Homo sapiens]. 234 1e-61
Alignment gi|NP_000286.3| alpha-1-antitrypsin precursor [Homo sapiens]. 234 1e-61
Alignment gi|NP_001121179.1| alpha-1-antitrypsin precursor [Homo sapiens]. 234 1e-61
Alignment gi|NP_001121178.1| alpha-1-antitrypsin precursor [Homo sapiens]. 234 1e-61
Alignment gi|NP_001121177.1| alpha-1-antitrypsin precursor [Homo sapiens]. 234 1e-61
Alignment gi|NP_001121176.1| alpha-1-antitrypsin precursor [Homo sapiens]. 234 1e-61
Alignment gi|NP_001121175.1| alpha-1-antitrypsin precursor [Homo sapiens]. 234 1e-61
>ref|NP_001076.2| alpha-1-antichymotrypsin precursor [Homo sapiens].
Length = 423
Score = 314 bits (805), Expect = 8e-86
Identities = 176/329 (53%), Positives = 222/329 (67%), Gaps = 6/329 (1%)
Frame = +2
Query: 134 CSRVHCVPADDLASKTVTLKGQIKKLPAHNTAVVSSNTDFAFSLYKQLALAERRENVIFS 313
C V C P L + +T + Q + + + S+N DFAFSLYKQL L +NVIFS
Sbjct: 18 CPAVLCHPNSPLDEENLTQENQDRGTHV-DLGLASANVDFAFSLYKQLVLKAPDKNVIFS 76
Query: 314 PLSVSIALAFLSLGARGPTLIELLEGLKFNLTKTPEAEIHQGFQHLLQALSQPSNLLQLN 493
PLS+S ALAFLSLGA TL E+L+GLKFNLT+T EAEIHQ FQHLL+ L+Q S+ LQL+
Sbjct: 77 PLSISTALAFLSLGAHNTTLTEILKGLKFNLTETSEAEIHQSFQHLLRTLNQSSDELQLS 136
Query: 494 VGNAMFVDERLKLLDKFVQDARELYFSEVFSISFKDSDAAIEFINNYVKNKTKGKIVDLF 673
+GNAMFV E+L LLD+F +DA+ LY SE F+ F+DS AA + IN+YVKN T+GKI DL
Sbjct: 137 MGNAMFVKEQLSLLDRFTEDAKRLYGSEAFATDFQDSAAAKKLINDYVKNGTRGKITDLI 196
Query: 674 KQLSPDTVLVLVNCIYFKAKWKMPFNPNFTTGADFHVSKNRTVRVPMMGITGRTVPYFRD 853
K L T++VLVN I+FKAKW+MPF+P T + F++SK + V VPMM + T+PYFRD
Sbjct: 197 KDLDSQTMMVLVNYIFFKAKWEMPFDPQDTHQSRFYLSKKKWVMVPMMSLHHLTIPYFRD 256
Query: 854 QELACTVVELPYTSNDSALFILPDDGRMEDVESQAAP------GDTEEVEETPCSPNG*L 1015
+EL+CTVVEL YT N SALFILPD +ME+VE+ P D+ E E L
Sbjct: 257 EELSCTVVELKYTGNASALFILPDQDKMEEVEAMLLPETLKRWRDSLEFREI---GELYL 313
Query: 1016 PSTCHGFPSPGDYKLHDILPHLGIKKVFT 1102
P F DY L+DIL LGI++ FT
Sbjct: 314 PK----FSISRDYNLNDILLQLGIEEAFT 338
>ref|NP_000615.3| plasma serine protease inhibitor [Homo sapiens].
Length = 406
Score = 234 bits (596), Expect = 1e-61
Identities = 132/307 (42%), Positives = 187/307 (60%), Gaps = 2/307 (0%)
Frame = +2
Query: 188 LKGQIKKLPAHNTAVVSSNTDFAFSLYKQLALAERRENVIFSPLSVSIALAFLSLGARGP 367
+K +++ L T SS DF F LY+ LA A +++ FSP+S+S++LA LSLGA
Sbjct: 27 MKKRVEDLHVGATVAPSSRRDFTFDLYRALASAAPSQSIFFSPVSISMSLAMLSLGAGSS 86
Query: 368 TLIELLEGLKFNLTKTPEAEIHQGFQHLLQALSQPSNLLQLNVGNAMFVDERLKLLDKFV 547
T +++LEGL NL K+ E E+H+GFQ LLQ L+QP + QL++GNA+F D + L D FV
Sbjct: 87 TKMQILEGLGLNLQKSSEKELHRGFQQLLQELNQPRDGFQLSLGNALFTDLVVDLQDTFV 146
Query: 548 QDARELYFSEVFSISFKDSDAAIEFINNYVKNKTKGKIVDLFKQLSPDTVLVLVNCIYFK 727
+ LY ++ F +F+DS A++ IN+YV +TKGKIVDL K L + V+++VN I+FK
Sbjct: 147 SAMKTLYLADTFPTNFRDSAGAMKQINDYVAKQTKGKIVDLLKNLDSNAVVIMVNYIFFK 206
Query: 728 AKWKMPFNPNFTTGADFHVSKNRTVRVPMMGITGRTVPYFRDQELACTVVELPYTSNDSA 907
AKW+ FN T DF+V+ VRVPMM + Y D+ L+C VV +PY N +A
Sbjct: 207 AKWETSFNHKGTQEQDFYVTSETVVRVPMMSREDQ-YHYLLDRNLSCRVVGVPYQGNATA 265
Query: 908 LFILPDDGRMEDVESQAAPGDTEEV--EETPCSPNG*LPSTCHGFPSPGDYKLHDILPHL 1081
LFILP +G+M+ VE+ G +E+ + L F G Y+L +LP L
Sbjct: 266 LFILPSEGKMQQVEN----GLSEKTLRKWLKMFKKRQLELYLPKFSIEGSYQLEKVLPSL 321
Query: 1082 GIKKVFT 1102
GI VFT
Sbjct: 322 GISNVFT 328
>ref|NP_001002236.1| alpha-1-antitrypsin precursor [Homo sapiens].
Length = 418
Score = 234 bits (596), Expect = 1e-61
Identities = 136/319 (42%), Positives = 193/319 (60%), Gaps = 2/319 (0%)
Frame = +2
Query: 155 PADDLASKTVTLKGQIKKLPAHNTAVVSSNTDFAFSLYKQLALAERRENVIFSPLSVSIA 334
P D A KT T + P N + + +FAFSLY+QLA N+ FSP+S++ A
Sbjct: 27 PQGDAAQKTDTSHHD-QDHPTFNK-ITPNLAEFAFSLYRQLAHQSNSTNIFFSPVSIATA 84
Query: 335 LAFLSLGARGPTLIELLEGLKFNLTKTPEAEIHQGFQHLLQALSQPSNLLQLNVGNAMFV 514
A LSLG + T E+LEGL FNLT+ PEA+IH+GFQ LL+ L+QP + LQL GN +F+
Sbjct: 85 FAMLSLGTKADTHDEILEGLNFNLTEIPEAQIHEGFQELLRTLNQPDSQLQLTTGNGLFL 144
Query: 515 DERLKLLDKFVQDARELYFSEVFSISFKDSDAAIEFINNYVKNKTKGKIVDLFKQLSPDT 694
E LKL+DKF++D ++LY SE F+++F D++ A + IN+YV+ T+GKIVDL K+L DT
Sbjct: 145 SEGLKLVDKFLEDVKKLYHSEAFTVNFGDTEEAKKQINDYVEKGTQGKIVDLVKELDRDT 204
Query: 695 VLVLVNCIYFKAKWKMPFNPNFTTGADFHVSKNRTVRVPMMGITGRTVPYFRDQELACTV 874
V LVN I+FK KW+ PF T DFHV + TV+VPMM G ++L+ V
Sbjct: 205 VFALVNYIFFKGKWERPFEVKDTEEEDFHVDQVTTVKVPMMKRLG-MFNIQHCKKLSSWV 263
Query: 875 VELPYTSNDSALFILPDDGRMEDVESQAAPGDTEEV--EETPCSPNG*LPSTCHGFPSPG 1048
+ + Y N +A+F LPD+G+++ +E++ + E S + LP G
Sbjct: 264 LLMKYLGNATAIFFLPDEGKLQHLENELTHDIITKFLENEDRRSASLHLPK----LSITG 319
Query: 1049 DYKLHDILPHLGIKKVFTH 1105
Y L +L LGI KVF++
Sbjct: 320 TYDLKSVLGQLGITKVFSN 338
>ref|NP_001002235.1| alpha-1-antitrypsin precursor [Homo sapiens].
Length = 418
Score = 234 bits (596), Expect = 1e-61
Identities = 136/319 (42%), Positives = 193/319 (60%), Gaps = 2/319 (0%)
Frame = +2
Query: 155 PADDLASKTVTLKGQIKKLPAHNTAVVSSNTDFAFSLYKQLALAERRENVIFSPLSVSIA 334
P D A KT T + P N + + +FAFSLY+QLA N+ FSP+S++ A
Sbjct: 27 PQGDAAQKTDTSHHD-QDHPTFNK-ITPNLAEFAFSLYRQLAHQSNSTNIFFSPVSIATA 84
Query: 335 LAFLSLGARGPTLIELLEGLKFNLTKTPEAEIHQGFQHLLQALSQPSNLLQLNVGNAMFV 514
A LSLG + T E+LEGL FNLT+ PEA+IH+GFQ LL+ L+QP + LQL GN +F+
Sbjct: 85 FAMLSLGTKADTHDEILEGLNFNLTEIPEAQIHEGFQELLRTLNQPDSQLQLTTGNGLFL 144
Query: 515 DERLKLLDKFVQDARELYFSEVFSISFKDSDAAIEFINNYVKNKTKGKIVDLFKQLSPDT 694
E LKL+DKF++D ++LY SE F+++F D++ A + IN+YV+ T+GKIVDL K+L DT
Sbjct: 145 SEGLKLVDKFLEDVKKLYHSEAFTVNFGDTEEAKKQINDYVEKGTQGKIVDLVKELDRDT 204
Query: 695 VLVLVNCIYFKAKWKMPFNPNFTTGADFHVSKNRTVRVPMMGITGRTVPYFRDQELACTV 874
V LVN I+FK KW+ PF T DFHV + TV+VPMM G ++L+ V
Sbjct: 205 VFALVNYIFFKGKWERPFEVKDTEEEDFHVDQVTTVKVPMMKRLG-MFNIQHCKKLSSWV 263
Query: 875 VELPYTSNDSALFILPDDGRMEDVESQAAPGDTEEV--EETPCSPNG*LPSTCHGFPSPG 1048
+ + Y N +A+F LPD+G+++ +E++ + E S + LP G
Sbjct: 264 LLMKYLGNATAIFFLPDEGKLQHLENELTHDIITKFLENEDRRSASLHLPK----LSITG 319
Query: 1049 DYKLHDILPHLGIKKVFTH 1105
Y L +L LGI KVF++
Sbjct: 320 TYDLKSVLGQLGITKVFSN 338
>ref|NP_000286.3| alpha-1-antitrypsin precursor [Homo sapiens].
Length = 418
Score = 234 bits (596), Expect = 1e-61
Identities = 136/319 (42%), Positives = 193/319 (60%), Gaps = 2/319 (0%)
Frame = +2
Query: 155 PADDLASKTVTLKGQIKKLPAHNTAVVSSNTDFAFSLYKQLALAERRENVIFSPLSVSIA 334
P D A KT T + P N + + +FAFSLY+QLA N+ FSP+S++ A
Sbjct: 27 PQGDAAQKTDTSHHD-QDHPTFNK-ITPNLAEFAFSLYRQLAHQSNSTNIFFSPVSIATA 84
Query: 335 LAFLSLGARGPTLIELLEGLKFNLTKTPEAEIHQGFQHLLQALSQPSNLLQLNVGNAMFV 514
A LSLG + T E+LEGL FNLT+ PEA+IH+GFQ LL+ L+QP + LQL GN +F+
Sbjct: 85 FAMLSLGTKADTHDEILEGLNFNLTEIPEAQIHEGFQELLRTLNQPDSQLQLTTGNGLFL 144
Query: 515 DERLKLLDKFVQDARELYFSEVFSISFKDSDAAIEFINNYVKNKTKGKIVDLFKQLSPDT 694
E LKL+DKF++D ++LY SE F+++F D++ A + IN+YV+ T+GKIVDL K+L DT
Sbjct: 145 SEGLKLVDKFLEDVKKLYHSEAFTVNFGDTEEAKKQINDYVEKGTQGKIVDLVKELDRDT 204
Query: 695 VLVLVNCIYFKAKWKMPFNPNFTTGADFHVSKNRTVRVPMMGITGRTVPYFRDQELACTV 874
V LVN I+FK KW+ PF T DFHV + TV+VPMM G ++L+ V
Sbjct: 205 VFALVNYIFFKGKWERPFEVKDTEEEDFHVDQVTTVKVPMMKRLG-MFNIQHCKKLSSWV 263
Query: 875 VELPYTSNDSALFILPDDGRMEDVESQAAPGDTEEV--EETPCSPNG*LPSTCHGFPSPG 1048
+ + Y N +A+F LPD+G+++ +E++ + E S + LP G
Sbjct: 264 LLMKYLGNATAIFFLPDEGKLQHLENELTHDIITKFLENEDRRSASLHLPK----LSITG 319
Query: 1049 DYKLHDILPHLGIKKVFTH 1105
Y L +L LGI KVF++
Sbjct: 320 TYDLKSVLGQLGITKVFSN 338
>ref|NP_001121179.1| alpha-1-antitrypsin precursor [Homo sapiens].
Length = 418
Score = 234 bits (596), Expect = 1e-61
Identities = 136/319 (42%), Positives = 193/319 (60%), Gaps = 2/319 (0%)
Frame = +2
Query: 155 PADDLASKTVTLKGQIKKLPAHNTAVVSSNTDFAFSLYKQLALAERRENVIFSPLSVSIA 334
P D A KT T + P N + + +FAFSLY+QLA N+ FSP+S++ A
Sbjct: 27 PQGDAAQKTDTSHHD-QDHPTFNK-ITPNLAEFAFSLYRQLAHQSNSTNIFFSPVSIATA 84
Query: 335 LAFLSLGARGPTLIELLEGLKFNLTKTPEAEIHQGFQHLLQALSQPSNLLQLNVGNAMFV 514
A LSLG + T E+LEGL FNLT+ PEA+IH+GFQ LL+ L+QP + LQL GN +F+
Sbjct: 85 FAMLSLGTKADTHDEILEGLNFNLTEIPEAQIHEGFQELLRTLNQPDSQLQLTTGNGLFL 144
Query: 515 DERLKLLDKFVQDARELYFSEVFSISFKDSDAAIEFINNYVKNKTKGKIVDLFKQLSPDT 694
E LKL+DKF++D ++LY SE F+++F D++ A + IN+YV+ T+GKIVDL K+L DT
Sbjct: 145 SEGLKLVDKFLEDVKKLYHSEAFTVNFGDTEEAKKQINDYVEKGTQGKIVDLVKELDRDT 204
Query: 695 VLVLVNCIYFKAKWKMPFNPNFTTGADFHVSKNRTVRVPMMGITGRTVPYFRDQELACTV 874
V LVN I+FK KW+ PF T DFHV + TV+VPMM G ++L+ V
Sbjct: 205 VFALVNYIFFKGKWERPFEVKDTEEEDFHVDQVTTVKVPMMKRLG-MFNIQHCKKLSSWV 263
Query: 875 VELPYTSNDSALFILPDDGRMEDVESQAAPGDTEEV--EETPCSPNG*LPSTCHGFPSPG 1048
+ + Y N +A+F LPD+G+++ +E++ + E S + LP G
Sbjct: 264 LLMKYLGNATAIFFLPDEGKLQHLENELTHDIITKFLENEDRRSASLHLPK----LSITG 319
Query: 1049 DYKLHDILPHLGIKKVFTH 1105
Y L +L LGI KVF++
Sbjct: 320 TYDLKSVLGQLGITKVFSN 338
>ref|NP_001121178.1| alpha-1-antitrypsin precursor [Homo sapiens].
Length = 418
Score = 234 bits (596), Expect = 1e-61
Identities = 136/319 (42%), Positives = 193/319 (60%), Gaps = 2/319 (0%)
Frame = +2
Query: 155 PADDLASKTVTLKGQIKKLPAHNTAVVSSNTDFAFSLYKQLALAERRENVIFSPLSVSIA 334
P D A KT T + P N + + +FAFSLY+QLA N+ FSP+S++ A
Sbjct: 27 PQGDAAQKTDTSHHD-QDHPTFNK-ITPNLAEFAFSLYRQLAHQSNSTNIFFSPVSIATA 84
Query: 335 LAFLSLGARGPTLIELLEGLKFNLTKTPEAEIHQGFQHLLQALSQPSNLLQLNVGNAMFV 514
A LSLG + T E+LEGL FNLT+ PEA+IH+GFQ LL+ L+QP + LQL GN +F+
Sbjct: 85 FAMLSLGTKADTHDEILEGLNFNLTEIPEAQIHEGFQELLRTLNQPDSQLQLTTGNGLFL 144
Query: 515 DERLKLLDKFVQDARELYFSEVFSISFKDSDAAIEFINNYVKNKTKGKIVDLFKQLSPDT 694
E LKL+DKF++D ++LY SE F+++F D++ A + IN+YV+ T+GKIVDL K+L DT
Sbjct: 145 SEGLKLVDKFLEDVKKLYHSEAFTVNFGDTEEAKKQINDYVEKGTQGKIVDLVKELDRDT 204
Query: 695 VLVLVNCIYFKAKWKMPFNPNFTTGADFHVSKNRTVRVPMMGITGRTVPYFRDQELACTV 874
V LVN I+FK KW+ PF T DFHV + TV+VPMM G ++L+ V
Sbjct: 205 VFALVNYIFFKGKWERPFEVKDTEEEDFHVDQVTTVKVPMMKRLG-MFNIQHCKKLSSWV 263
Query: 875 VELPYTSNDSALFILPDDGRMEDVESQAAPGDTEEV--EETPCSPNG*LPSTCHGFPSPG 1048
+ + Y N +A+F LPD+G+++ +E++ + E S + LP G
Sbjct: 264 LLMKYLGNATAIFFLPDEGKLQHLENELTHDIITKFLENEDRRSASLHLPK----LSITG 319
Query: 1049 DYKLHDILPHLGIKKVFTH 1105
Y L +L LGI KVF++
Sbjct: 320 TYDLKSVLGQLGITKVFSN 338
>ref|NP_001121177.1| alpha-1-antitrypsin precursor [Homo sapiens].
Length = 418
Score = 234 bits (596), Expect = 1e-61
Identities = 136/319 (42%), Positives = 193/319 (60%), Gaps = 2/319 (0%)
Frame = +2
Query: 155 PADDLASKTVTLKGQIKKLPAHNTAVVSSNTDFAFSLYKQLALAERRENVIFSPLSVSIA 334
P D A KT T + P N + + +FAFSLY+QLA N+ FSP+S++ A
Sbjct: 27 PQGDAAQKTDTSHHD-QDHPTFNK-ITPNLAEFAFSLYRQLAHQSNSTNIFFSPVSIATA 84
Query: 335 LAFLSLGARGPTLIELLEGLKFNLTKTPEAEIHQGFQHLLQALSQPSNLLQLNVGNAMFV 514
A LSLG + T E+LEGL FNLT+ PEA+IH+GFQ LL+ L+QP + LQL GN +F+
Sbjct: 85 FAMLSLGTKADTHDEILEGLNFNLTEIPEAQIHEGFQELLRTLNQPDSQLQLTTGNGLFL 144
Query: 515 DERLKLLDKFVQDARELYFSEVFSISFKDSDAAIEFINNYVKNKTKGKIVDLFKQLSPDT 694
E LKL+DKF++D ++LY SE F+++F D++ A + IN+YV+ T+GKIVDL K+L DT
Sbjct: 145 SEGLKLVDKFLEDVKKLYHSEAFTVNFGDTEEAKKQINDYVEKGTQGKIVDLVKELDRDT 204
Query: 695 VLVLVNCIYFKAKWKMPFNPNFTTGADFHVSKNRTVRVPMMGITGRTVPYFRDQELACTV 874
V LVN I+FK KW+ PF T DFHV + TV+VPMM G ++L+ V
Sbjct: 205 VFALVNYIFFKGKWERPFEVKDTEEEDFHVDQVTTVKVPMMKRLG-MFNIQHCKKLSSWV 263
Query: 875 VELPYTSNDSALFILPDDGRMEDVESQAAPGDTEEV--EETPCSPNG*LPSTCHGFPSPG 1048
+ + Y N +A+F LPD+G+++ +E++ + E S + LP G
Sbjct: 264 LLMKYLGNATAIFFLPDEGKLQHLENELTHDIITKFLENEDRRSASLHLPK----LSITG 319
Query: 1049 DYKLHDILPHLGIKKVFTH 1105
Y L +L LGI KVF++
Sbjct: 320 TYDLKSVLGQLGITKVFSN 338
>ref|NP_001121176.1| alpha-1-antitrypsin precursor [Homo sapiens].
Length = 418
Score = 234 bits (596), Expect = 1e-61
Identities = 136/319 (42%), Positives = 193/319 (60%), Gaps = 2/319 (0%)
Frame = +2
Query: 155 PADDLASKTVTLKGQIKKLPAHNTAVVSSNTDFAFSLYKQLALAERRENVIFSPLSVSIA 334
P D A KT T + P N + + +FAFSLY+QLA N+ FSP+S++ A
Sbjct: 27 PQGDAAQKTDTSHHD-QDHPTFNK-ITPNLAEFAFSLYRQLAHQSNSTNIFFSPVSIATA 84
Query: 335 LAFLSLGARGPTLIELLEGLKFNLTKTPEAEIHQGFQHLLQALSQPSNLLQLNVGNAMFV 514
A LSLG + T E+LEGL FNLT+ PEA+IH+GFQ LL+ L+QP + LQL GN +F+
Sbjct: 85 FAMLSLGTKADTHDEILEGLNFNLTEIPEAQIHEGFQELLRTLNQPDSQLQLTTGNGLFL 144
Query: 515 DERLKLLDKFVQDARELYFSEVFSISFKDSDAAIEFINNYVKNKTKGKIVDLFKQLSPDT 694
E LKL+DKF++D ++LY SE F+++F D++ A + IN+YV+ T+GKIVDL K+L DT
Sbjct: 145 SEGLKLVDKFLEDVKKLYHSEAFTVNFGDTEEAKKQINDYVEKGTQGKIVDLVKELDRDT 204
Query: 695 VLVLVNCIYFKAKWKMPFNPNFTTGADFHVSKNRTVRVPMMGITGRTVPYFRDQELACTV 874
V LVN I+FK KW+ PF T DFHV + TV+VPMM G ++L+ V
Sbjct: 205 VFALVNYIFFKGKWERPFEVKDTEEEDFHVDQVTTVKVPMMKRLG-MFNIQHCKKLSSWV 263
Query: 875 VELPYTSNDSALFILPDDGRMEDVESQAAPGDTEEV--EETPCSPNG*LPSTCHGFPSPG 1048
+ + Y N +A+F LPD+G+++ +E++ + E S + LP G
Sbjct: 264 LLMKYLGNATAIFFLPDEGKLQHLENELTHDIITKFLENEDRRSASLHLPK----LSITG 319
Query: 1049 DYKLHDILPHLGIKKVFTH 1105
Y L +L LGI KVF++
Sbjct: 320 TYDLKSVLGQLGITKVFSN 338
>ref|NP_001121175.1| alpha-1-antitrypsin precursor [Homo sapiens].
Length = 418
Score = 234 bits (596), Expect = 1e-61
Identities = 136/319 (42%), Positives = 193/319 (60%), Gaps = 2/319 (0%)
Frame = +2
Query: 155 PADDLASKTVTLKGQIKKLPAHNTAVVSSNTDFAFSLYKQLALAERRENVIFSPLSVSIA 334
P D A KT T + P N + + +FAFSLY+QLA N+ FSP+S++ A
Sbjct: 27 PQGDAAQKTDTSHHD-QDHPTFNK-ITPNLAEFAFSLYRQLAHQSNSTNIFFSPVSIATA 84
Query: 335 LAFLSLGARGPTLIELLEGLKFNLTKTPEAEIHQGFQHLLQALSQPSNLLQLNVGNAMFV 514
A LSLG + T E+LEGL FNLT+ PEA+IH+GFQ LL+ L+QP + LQL GN +F+
Sbjct: 85 FAMLSLGTKADTHDEILEGLNFNLTEIPEAQIHEGFQELLRTLNQPDSQLQLTTGNGLFL 144
Query: 515 DERLKLLDKFVQDARELYFSEVFSISFKDSDAAIEFINNYVKNKTKGKIVDLFKQLSPDT 694
E LKL+DKF++D ++LY SE F+++F D++ A + IN+YV+ T+GKIVDL K+L DT
Sbjct: 145 SEGLKLVDKFLEDVKKLYHSEAFTVNFGDTEEAKKQINDYVEKGTQGKIVDLVKELDRDT 204
Query: 695 VLVLVNCIYFKAKWKMPFNPNFTTGADFHVSKNRTVRVPMMGITGRTVPYFRDQELACTV 874
V LVN I+FK KW+ PF T DFHV + TV+VPMM G ++L+ V
Sbjct: 205 VFALVNYIFFKGKWERPFEVKDTEEEDFHVDQVTTVKVPMMKRLG-MFNIQHCKKLSSWV 263
Query: 875 VELPYTSNDSALFILPDDGRMEDVESQAAPGDTEEV--EETPCSPNG*LPSTCHGFPSPG 1048
+ + Y N +A+F LPD+G+++ +E++ + E S + LP G
Sbjct: 264 LLMKYLGNATAIFFLPDEGKLQHLENELTHDIITKFLENEDRRSASLHLPK----LSITG 319
Query: 1049 DYKLHDILPHLGIKKVFTH 1105
Y L +L LGI KVF++
Sbjct: 320 TYDLKSVLGQLGITKVFSN 338
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 44,283,371
Number of extensions: 1274753
Number of successful extensions: 7172
Number of sequences better than 1.0e-05: 60
Number of HSP's gapped: 6942
Number of HSP's successfully gapped: 61
Length of query: 369
Length of database: 18,297,164
Length adjustment: 104
Effective length of query: 265
Effective length of database: 14,868,908
Effective search space: 3940260620
Effective search space used: 3940260620
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-000796
(1107 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_032484.1| serine protease inhibitor A3C precursor [Mus mu... 297 9e-81
Alignment gi|NP_001161766.1| serine protease inhibitor A3F [Mus musculus]. 291 5e-79
Alignment gi|NP_001028507.2| serine protease inhibitor A3F [Mus musculus]. 291 5e-79
Alignment gi|NP_001161767.1| serine protease inhibitor A3F [Mus musculus]. 291 5e-79
Alignment gi|XP_003085882.1| PREDICTED: serine protease inhibitor A3F iso... 286 2e-77
Alignment gi|XP_003085883.1| PREDICTED: serine protease inhibitor A3F iso... 286 2e-77
Alignment gi|NP_001186869.1| serine (or cysteine) peptidase inhibitor, cl... 286 2e-77
Alignment gi|NP_033279.2| serine protease inhibitor A3M precursor [Mus mu... 286 3e-77
Alignment gi|NP_033277.1| serine protease inhibitor A3G [Mus musculus]. 285 6e-77
Alignment gi|NP_033278.2| serine protease inhibitor A3N precursor [Mus mu... 285 6e-77
>ref|NP_032484.1| serine protease inhibitor A3C precursor [Mus musculus].
Length = 417
Score = 297 bits (761), Expect = 9e-81
Identities = 160/323 (49%), Positives = 209/323 (64%)
Frame = +2
Query: 134 CSRVHCVPADDLASKTVTLKGQIKKLPAHNTAVVSSNTDFAFSLYKQLALAERRENVIFS 313
C V C P L T+ K + + + S NTDFAFSLYK+LAL N++FS
Sbjct: 15 CPGVLCFPDGTLERDTLFHKDKENGTQLDSLTLASINTDFAFSLYKKLALKNPDTNIVFS 74
Query: 314 PLSVSIALAFLSLGARGPTLIELLEGLKFNLTKTPEAEIHQGFQHLLQALSQPSNLLQLN 493
PLS+S ALA +SLGA+G TL E+LEGL FNLT+TPEA+IHQGF HLLQ LS P +Q++
Sbjct: 75 PLSISAALAIVSLGAKGNTLEEILEGLNFNLTETPEADIHQGFGHLLQRLSHPGEQVQIS 134
Query: 494 VGNAMFVDERLKLLDKFVQDARELYFSEVFSISFKDSDAAIEFINNYVKNKTKGKIVDLF 673
G+A+FV++ L++L +F + AR LY +E F+ F+ A + IN+YV N+T+ KI L
Sbjct: 135 TGSALFVEKHLQILAEFQEKARALYQAEAFTADFQQPLEATKLINDYVSNQTQRKIKGLI 194
Query: 674 KQLSPDTVLVLVNCIYFKAKWKMPFNPNFTTGADFHVSKNRTVRVPMMGITGRTVPYFRD 853
L DT++VLVN IYFK KWKMPFNP T ++F++ R+V+VPMM I T PYFRD
Sbjct: 195 SDLDTDTLMVLVNYIYFKGKWKMPFNPRDTFESEFYLDVKRSVKVPMMKIKTLTTPYFRD 254
Query: 854 QELACTVVELPYTSNDSALFILPDDGRMEDVESQAAPGDTEEVEETPCSPNG*LPSTCHG 1033
+EL+CTVVEL Y N SALFILPD GRM+ VE+ P +T + P
Sbjct: 255 EELSCTVVELKYKGNASALFILPDQGRMQQVEASLQP-ETLRKWKNSLRPRKMGELYLPK 313
Query: 1034 FPSPGDYKLHDILPHLGIKKVFT 1102
F DY L +ILP LGIK++F+
Sbjct: 314 FSISTDYSLKNILPELGIKEIFS 336
>ref|NP_001161766.1| serine protease inhibitor A3F [Mus musculus].
Length = 445
Score = 291 bits (746), Expect = 5e-79
Identities = 153/316 (48%), Positives = 208/316 (65%)
Frame = +2
Query: 155 PADDLASKTVTLKGQIKKLPAHNTAVVSSNTDFAFSLYKQLALAERRENVIFSPLSVSIA 334
P L T + Q + + SSNTDFAFSLYK+L L ENV+FSP S+ A
Sbjct: 12 PDVTLGRNTAVREVQENITSVDSLTLASSNTDFAFSLYKELVLKNPDENVVFSPFSICTA 71
Query: 335 LAFLSLGARGPTLIELLEGLKFNLTKTPEAEIHQGFQHLLQALSQPSNLLQLNVGNAMFV 514
LA LSLGA+ TL E+LEGLKFNLT+TPE +IHQGF++LL LSQP N +Q++ G+A+F+
Sbjct: 72 LALLSLGAKSNTLKEILEGLKFNLTETPEPDIHQGFRYLLDLLSQPGNQVQISTGSALFI 131
Query: 515 DERLKLLDKFVQDARELYFSEVFSISFKDSDAAIEFINNYVKNKTKGKIVDLFKQLSPDT 694
++ L++L +F + AR LY +E F+ F+ A + IN+YV N T+GKI +L L T
Sbjct: 132 EKHLQILAEFKEKARALYQAEAFTADFQQPLEATKLINDYVSNHTQGKIKELISDLDKRT 191
Query: 695 VLVLVNCIYFKAKWKMPFNPNFTTGADFHVSKNRTVRVPMMGITGRTVPYFRDQELACTV 874
++VLVN IYFK KW+MPF+P+ T ++F++ +NR+V+VPMM I T PYFRD+EL+CTV
Sbjct: 192 LMVLVNYIYFKGKWEMPFDPDDTCKSEFYLDENRSVKVPMMKINNLTTPYFRDEELSCTV 251
Query: 875 VELPYTSNDSALFILPDDGRMEDVESQAAPGDTEEVEETPCSPNG*LPSTCHGFPSPGDY 1054
VEL YT N SA+FILPD G+M+ VE+ P +T + P F DY
Sbjct: 252 VELKYTGNASAMFILPDQGKMQQVEASLQP-ETLRNWKDSLKPRLINELCLPKFSISTDY 310
Query: 1055 KLHDILPHLGIKKVFT 1102
L ILP LGI+++F+
Sbjct: 311 SLEHILPELGIRELFS 326
>ref|NP_001028507.2| serine protease inhibitor A3F [Mus musculus].
Length = 445
Score = 291 bits (746), Expect = 5e-79
Identities = 153/316 (48%), Positives = 208/316 (65%)
Frame = +2
Query: 155 PADDLASKTVTLKGQIKKLPAHNTAVVSSNTDFAFSLYKQLALAERRENVIFSPLSVSIA 334
P L T + Q + + SSNTDFAFSLYK+L L ENV+FSP S+ A
Sbjct: 12 PDVTLGRNTAVREVQENITSVDSLTLASSNTDFAFSLYKELVLKNPDENVVFSPFSICTA 71
Query: 335 LAFLSLGARGPTLIELLEGLKFNLTKTPEAEIHQGFQHLLQALSQPSNLLQLNVGNAMFV 514
LA LSLGA+ TL E+LEGLKFNLT+TPE +IHQGF++LL LSQP N +Q++ G+A+F+
Sbjct: 72 LALLSLGAKSNTLKEILEGLKFNLTETPEPDIHQGFRYLLDLLSQPGNQVQISTGSALFI 131
Query: 515 DERLKLLDKFVQDARELYFSEVFSISFKDSDAAIEFINNYVKNKTKGKIVDLFKQLSPDT 694
++ L++L +F + AR LY +E F+ F+ A + IN+YV N T+GKI +L L T
Sbjct: 132 EKHLQILAEFKEKARALYQAEAFTADFQQPLEATKLINDYVSNHTQGKIKELISDLDKRT 191
Query: 695 VLVLVNCIYFKAKWKMPFNPNFTTGADFHVSKNRTVRVPMMGITGRTVPYFRDQELACTV 874
++VLVN IYFK KW+MPF+P+ T ++F++ +NR+V+VPMM I T PYFRD+EL+CTV
Sbjct: 192 LMVLVNYIYFKGKWEMPFDPDDTCKSEFYLDENRSVKVPMMKINNLTTPYFRDEELSCTV 251
Query: 875 VELPYTSNDSALFILPDDGRMEDVESQAAPGDTEEVEETPCSPNG*LPSTCHGFPSPGDY 1054
VEL YT N SA+FILPD G+M+ VE+ P +T + P F DY
Sbjct: 252 VELKYTGNASAMFILPDQGKMQQVEASLQP-ETLRNWKDSLKPRLINELCLPKFSISTDY 310
Query: 1055 KLHDILPHLGIKKVFT 1102
L ILP LGI+++F+
Sbjct: 311 SLEHILPELGIRELFS 326
>ref|NP_001161767.1| serine protease inhibitor A3F [Mus musculus].
Length = 445
Score = 291 bits (746), Expect = 5e-79
Identities = 153/316 (48%), Positives = 208/316 (65%)
Frame = +2
Query: 155 PADDLASKTVTLKGQIKKLPAHNTAVVSSNTDFAFSLYKQLALAERRENVIFSPLSVSIA 334
P L T + Q + + SSNTDFAFSLYK+L L ENV+FSP S+ A
Sbjct: 12 PDVTLGRNTAVREVQENITSVDSLTLASSNTDFAFSLYKELVLKNPDENVVFSPFSICTA 71
Query: 335 LAFLSLGARGPTLIELLEGLKFNLTKTPEAEIHQGFQHLLQALSQPSNLLQLNVGNAMFV 514
LA LSLGA+ TL E+LEGLKFNLT+TPE +IHQGF++LL LSQP N +Q++ G+A+F+
Sbjct: 72 LALLSLGAKSNTLKEILEGLKFNLTETPEPDIHQGFRYLLDLLSQPGNQVQISTGSALFI 131
Query: 515 DERLKLLDKFVQDARELYFSEVFSISFKDSDAAIEFINNYVKNKTKGKIVDLFKQLSPDT 694
++ L++L +F + AR LY +E F+ F+ A + IN+YV N T+GKI +L L T
Sbjct: 132 EKHLQILAEFKEKARALYQAEAFTADFQQPLEATKLINDYVSNHTQGKIKELISDLDKRT 191
Query: 695 VLVLVNCIYFKAKWKMPFNPNFTTGADFHVSKNRTVRVPMMGITGRTVPYFRDQELACTV 874
++VLVN IYFK KW+MPF+P+ T ++F++ +NR+V+VPMM I T PYFRD+EL+CTV
Sbjct: 192 LMVLVNYIYFKGKWEMPFDPDDTCKSEFYLDENRSVKVPMMKINNLTTPYFRDEELSCTV 251
Query: 875 VELPYTSNDSALFILPDDGRMEDVESQAAPGDTEEVEETPCSPNG*LPSTCHGFPSPGDY 1054
VEL YT N SA+FILPD G+M+ VE+ P +T + P F DY
Sbjct: 252 VELKYTGNASAMFILPDQGKMQQVEASLQP-ETLRNWKDSLKPRLINELCLPKFSISTDY 310
Query: 1055 KLHDILPHLGIKKVFT 1102
L ILP LGI+++F+
Sbjct: 311 SLEHILPELGIRELFS 326
>ref|XP_003085882.1| PREDICTED: serine protease inhibitor A3F isoform 1 [Mus musculus].
Length = 408
Score = 286 bits (733), Expect = 2e-77
Identities = 150/291 (51%), Positives = 199/291 (68%)
Frame = +2
Query: 230 VVSSNTDFAFSLYKQLALAERRENVIFSPLSVSIALAFLSLGARGPTLIELLEGLKFNLT 409
V SSNTDFAFSLY++L L ENV+FSP S+ ALA LSLGA+ TL E+LEGLKFNLT
Sbjct: 37 VASSNTDFAFSLYRKLVLKNPDENVVFSPFSIFTALALLSLGAKSNTLKEILEGLKFNLT 96
Query: 410 KTPEAEIHQGFQHLLQALSQPSNLLQLNVGNAMFVDERLKLLDKFVQDARELYFSEVFSI 589
+TPE +IHQGF++LL LSQP + +Q++ G+A+FV++ L++L +F + AR LY +E F+
Sbjct: 97 ETPEPDIHQGFRYLLDLLSQPGDQVQISTGSALFVEKHLQILAEFKEKARALYQAEAFTA 156
Query: 590 SFKDSDAAIEFINNYVKNKTKGKIVDLFKQLSPDTVLVLVNCIYFKAKWKMPFNPNFTTG 769
F A + IN+YV N+T+GKI +L L T++VLVN IYFK KWKMPF+P T
Sbjct: 157 DFLQPCQAKKLINDYVSNQTQGKIKELISDLDKSTLMVLVNYIYFKGKWKMPFDPRDTFN 216
Query: 770 ADFHVSKNRTVRVPMMGITGRTVPYFRDQELACTVVELPYTSNDSALFILPDDGRMEDVE 949
+ F++ + R+V+VPMM I T PYFRD EL+C+VVEL YT N SALFILPD G+M+ VE
Sbjct: 217 SKFYLDEKRSVKVPMMKIEELTTPYFRDDELSCSVVELKYTGNASALFILPDQGKMQQVE 276
Query: 950 SQAAPGDTEEVEETPCSPNG*LPSTCHGFPSPGDYKLHDILPHLGIKKVFT 1102
+ P +T + P+ F DY L ILP LGI++VF+
Sbjct: 277 TSLHP-ETLRKWKNSLKPSRISELHLPKFSISNDYSLEHILPVLGIREVFS 326
>ref|XP_003085883.1| PREDICTED: serine protease inhibitor A3F isoform 2 [Mus musculus].
Length = 408
Score = 286 bits (733), Expect = 2e-77
Identities = 150/291 (51%), Positives = 199/291 (68%)
Frame = +2
Query: 230 VVSSNTDFAFSLYKQLALAERRENVIFSPLSVSIALAFLSLGARGPTLIELLEGLKFNLT 409
V SSNTDFAFSLY++L L ENV+FSP S+ ALA LSLGA+ TL E+LEGLKFNLT
Sbjct: 37 VASSNTDFAFSLYRKLVLKNPDENVVFSPFSIFTALALLSLGAKSNTLKEILEGLKFNLT 96
Query: 410 KTPEAEIHQGFQHLLQALSQPSNLLQLNVGNAMFVDERLKLLDKFVQDARELYFSEVFSI 589
+TPE +IHQGF++LL LSQP + +Q++ G+A+FV++ L++L +F + AR LY +E F+
Sbjct: 97 ETPEPDIHQGFRYLLDLLSQPGDQVQISTGSALFVEKHLQILAEFKEKARALYQAEAFTA 156
Query: 590 SFKDSDAAIEFINNYVKNKTKGKIVDLFKQLSPDTVLVLVNCIYFKAKWKMPFNPNFTTG 769
F A + IN+YV N+T+GKI +L L T++VLVN IYFK KWKMPF+P T
Sbjct: 157 DFLQPCQAKKLINDYVSNQTQGKIKELISDLDKSTLMVLVNYIYFKGKWKMPFDPRDTFN 216
Query: 770 ADFHVSKNRTVRVPMMGITGRTVPYFRDQELACTVVELPYTSNDSALFILPDDGRMEDVE 949
+ F++ + R+V+VPMM I T PYFRD EL+C+VVEL YT N SALFILPD G+M+ VE
Sbjct: 217 SKFYLDEKRSVKVPMMKIEELTTPYFRDDELSCSVVELKYTGNASALFILPDQGKMQQVE 276
Query: 950 SQAAPGDTEEVEETPCSPNG*LPSTCHGFPSPGDYKLHDILPHLGIKKVFT 1102
+ P +T + P+ F DY L ILP LGI++VF+
Sbjct: 277 TSLHP-ETLRKWKNSLKPSRISELHLPKFSISNDYSLEHILPVLGIREVFS 326
>ref|NP_001186869.1| serine (or cysteine) peptidase inhibitor, clade A, member 3I [Mus
musculus].
Length = 408
Score = 286 bits (732), Expect = 2e-77
Identities = 149/291 (51%), Positives = 199/291 (68%)
Frame = +2
Query: 230 VVSSNTDFAFSLYKQLALAERRENVIFSPLSVSIALAFLSLGARGPTLIELLEGLKFNLT 409
V SSNTDFAFSLY++L L ENV+FSP S+ ALA LSLGA+ TL E+LEGLKFNLT
Sbjct: 37 VASSNTDFAFSLYRKLVLKNPDENVVFSPFSIFTALALLSLGAKSNTLKEILEGLKFNLT 96
Query: 410 KTPEAEIHQGFQHLLQALSQPSNLLQLNVGNAMFVDERLKLLDKFVQDARELYFSEVFSI 589
+TPE +IHQGF++LL LSQP + +Q++ G+A+FV++ L++L +F + AR LY +E F+
Sbjct: 97 ETPEPDIHQGFRYLLDLLSQPGDQVQISTGSALFVEKHLQILAEFKEKARALYQAEAFTA 156
Query: 590 SFKDSDAAIEFINNYVKNKTKGKIVDLFKQLSPDTVLVLVNCIYFKAKWKMPFNPNFTTG 769
F A + IN+YV N+T+GKI +L L T++VLVN IYFK KWKMPF+P T
Sbjct: 157 DFLQPCQAKKLINDYVSNQTQGKIKELISDLDKSTLMVLVNYIYFKGKWKMPFDPRDTFN 216
Query: 770 ADFHVSKNRTVRVPMMGITGRTVPYFRDQELACTVVELPYTSNDSALFILPDDGRMEDVE 949
+ F++ + R+V+VPMM I T PYFRD EL+C+VVEL YT N SALFILPD G+M+ VE
Sbjct: 217 SKFYLDEKRSVKVPMMKIEELTTPYFRDDELSCSVVELKYTGNASALFILPDQGKMQQVE 276
Query: 950 SQAAPGDTEEVEETPCSPNG*LPSTCHGFPSPGDYKLHDILPHLGIKKVFT 1102
+ P +T + P+ F DY L +LP LGI++VF+
Sbjct: 277 TSLHP-ETLRKWKNSLKPSRISELHLPKFSISNDYSLEHVLPVLGIREVFS 326
>ref|NP_033279.2| serine protease inhibitor A3M precursor [Mus musculus].
Length = 418
Score = 286 bits (731), Expect = 3e-77
Identities = 156/332 (46%), Positives = 212/332 (63%), Gaps = 9/332 (2%)
Frame = +2
Query: 134 CSRVHCVPADDLASKTVTLKGQIKKLPAHNTAVVSSNTDFAFSLYKQLALAERRENVIFS 313
C V C D + K Q P + + S NTDFAFSLYK++AL +N++FS
Sbjct: 15 CPTVLCFSDDTWGIDILLHKNQESGTPDDSLTLASINTDFAFSLYKKMALKNPDKNIVFS 74
Query: 314 PLSVSIALAFLSLGARGPTLIELLEGLKFNLTKTPEAEIHQGFQHLLQALSQPSNLLQLN 493
PLS+S ALA +SLGA+G TL E+LEGLKFNLT+T EA+IHQGF HLLQ LSQP + Q+N
Sbjct: 75 PLSISAALALVSLGAKGNTLEEILEGLKFNLTETSEADIHQGFGHLLQRLSQPEDQDQIN 134
Query: 494 VGNAMFVDERLKLLDKFVQDARELYFSEVFSISFKDSDAAIEFINNYVKNKTKGKIVDLF 673
+GNAMF+++ L++L +F + R LY +E F+ F+ A + IN+YV N+T+G I L
Sbjct: 135 IGNAMFIEKDLQILAEFHEKTRALYQTEAFTADFQQPTEATKLINDYVSNQTQGMIKKLI 194
Query: 674 KQLSPDTVLVLVNCIYFKAKWKMPFNPNFTTGADFHVSKNRTVRVPMMGITGRTVPYFRD 853
+L T++VLVN IYFK KWK+ F+P T ++F++ + R+V+VPMM + T +FRD
Sbjct: 195 SELDDRTLMVLVNYIYFKGKWKISFDPQDTFESEFYLDEKRSVKVPMMKMKFLTTRHFRD 254
Query: 854 QELACTVVELPYTSNDSALFILPDDGRMEDVESQAAPG---------DTEEVEETPCSPN 1006
+EL+C+V+EL YT N SALFILPD GRM+ VE+ P T ++ E
Sbjct: 255 EELSCSVLELKYTGNASALFILPDQGRMQQVEASLQPETLRKWWKSLKTRKIGELY---- 310
Query: 1007 G*LPSTCHGFPSPGDYKLHDILPHLGIKKVFT 1102
LP F DY L DILP LGIK++F+
Sbjct: 311 --LPK----FSISTDYNLKDILPELGIKEIFS 336
>ref|NP_033277.1| serine protease inhibitor A3G [Mus musculus].
Length = 440
Score = 285 bits (728), Expect = 6e-77
Identities = 153/316 (48%), Positives = 204/316 (64%)
Frame = +2
Query: 155 PADDLASKTVTLKGQIKKLPAHNTAVVSSNTDFAFSLYKQLALAERRENVIFSPLSVSIA 334
P L T + Q + +VSSNTDFAFSLY++L L ENV+FSP S+ A
Sbjct: 12 PDVTLGRNTAVREVQENVTSVDSLTLVSSNTDFAFSLYRKLVLKNPDENVVFSPFSICTA 71
Query: 335 LAFLSLGARGPTLIELLEGLKFNLTKTPEAEIHQGFQHLLQALSQPSNLLQLNVGNAMFV 514
LA LSLGA+ TL E+LEGLKFNLT+TPE +IHQGF++LL LSQP N +Q++ G+A+F+
Sbjct: 72 LALLSLGAKSNTLKEILEGLKFNLTETPEPDIHQGFRYLLDLLSQPGNQVQISTGSALFI 131
Query: 515 DERLKLLDKFVQDARELYFSEVFSISFKDSDAAIEFINNYVKNKTKGKIVDLFKQLSPDT 694
++ L++L +F + AR LY +E F+ F+ A + IN+YV N T+GKI +L L T
Sbjct: 132 EKHLQILAEFKEKARALYQAEAFTADFQQPLKATKLINDYVSNHTQGKIKELISGLKEST 191
Query: 695 VLVLVNCIYFKAKWKMPFNPNFTTGADFHVSKNRTVRVPMMGITGRTVPYFRDQELACTV 874
++VLVN IYFK KWK PF+PN T ++F++ + R+V V MM T PYFRD+EL+CTV
Sbjct: 192 LMVLVNYIYFKGKWKNPFDPNDTFKSEFYLDEKRSVIVSMMKTGYLTTPYFRDEELSCTV 251
Query: 875 VELPYTSNDSALFILPDDGRMEDVESQAAPGDTEEVEETPCSPNG*LPSTCHGFPSPGDY 1054
VEL YT N SA+FILPD GRM+ VE+ P +T + P F DY
Sbjct: 252 VELKYTGNASAMFILPDQGRMQQVEASLQP-ETLRKWKNSLKPRMIHELRLPKFSISTDY 310
Query: 1055 KLHDILPHLGIKKVFT 1102
L ILP LGI++VF+
Sbjct: 311 SLEHILPELGIREVFS 326
>ref|NP_033278.2| serine protease inhibitor A3N precursor [Mus musculus].
Length = 418
Score = 285 bits (728), Expect = 6e-77
Identities = 151/323 (46%), Positives = 206/323 (63%)
Frame = +2
Query: 134 CSRVHCVPADDLASKTVTLKGQIKKLPAHNTAVVSSNTDFAFSLYKQLALAERRENVIFS 313
C V C P L + + + S NTDFAFSLYK+L L +N++FS
Sbjct: 15 CPAVLCFPDGTLGMDAAVQEDHDNGTQLDSLTLASINTDFAFSLYKELVLKNPDKNIVFS 74
Query: 314 PLSVSIALAFLSLGARGPTLIELLEGLKFNLTKTPEAEIHQGFQHLLQALSQPSNLLQLN 493
PLS+S ALA +SLGA+G TL E+LEGLKFNLT+T EA+IHQGF HLLQ L+QP + +Q++
Sbjct: 75 PLSISAALAVMSLGAKGNTLEEILEGLKFNLTETSEADIHQGFGHLLQRLNQPKDQVQIS 134
Query: 494 VGNAMFVDERLKLLDKFVQDARELYFSEVFSISFKDSDAAIEFINNYVKNKTKGKIVDLF 673
G+A+F+++R ++L +F + AR LY +E F+ F+ A + IN+YV+ +T+G I +L
Sbjct: 135 TGSALFIEKRQQILTEFQEKARALYQAEAFTADFQQPRQAKKLINDYVRKQTQGMIKELV 194
Query: 674 KQLSPDTVLVLVNCIYFKAKWKMPFNPNFTTGADFHVSKNRTVRVPMMGITGRTVPYFRD 853
L T++VLVN IYFKAKWK+PF+P T ++F+ K R V VPMM + T PYFRD
Sbjct: 195 SDLDKRTLMVLVNYIYFKAKWKVPFDPLDTFKSEFYAGKRRPVIVPMMSMEDLTTPYFRD 254
Query: 854 QELACTVVELPYTSNDSALFILPDDGRMEDVESQAAPGDTEEVEETPCSPNG*LPSTCHG 1033
+EL CTVVEL YT N SA+FILPD G+M+ VE+ P +T + P
Sbjct: 255 EELFCTVVELKYTGNASAMFILPDQGKMQQVEASLQP-ETLRKWKNSLKPRMIDELHLPK 313
Query: 1034 FPSPGDYKLHDILPHLGIKKVFT 1102
F DY L D+L LGI++VF+
Sbjct: 314 FSISTDYSLEDVLSKLGIREVFS 336
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 37,227,759
Number of extensions: 1051288
Number of successful extensions: 5704
Number of sequences better than 1.0e-05: 79
Number of HSP's gapped: 5433
Number of HSP's successfully gapped: 87
Length of query: 369
Length of database: 15,617,559
Length adjustment: 103
Effective length of query: 266
Effective length of database: 12,523,851
Effective search space: 3331344366
Effective search space used: 3331344366
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-000796
(1107 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_001928857.3| PREDICTED: serpin A3-8 [Sus scrofa]. 539 e-153
Alignment gi|NP_998952.1| alpha-1-antichymotrypsin 2 [Sus scrofa]. 460 e-130
Alignment gi|XP_001928879.1| PREDICTED: serpin A3-6 [Sus scrofa]. 459 e-130
Alignment gi|XP_001928637.3| PREDICTED: serpin A3-5 [Sus scrofa]. 440 e-124
Alignment gi|XP_003356842.1| PREDICTED: serpin A3-6 [Sus scrofa]. 316 1e-86
Alignment gi|XP_003356841.1| PREDICTED: serpin A3-8-like, partial [Sus sc... 257 9e-69
Alignment gi|NP_999560.1| alpha-1-antitrypsin precursor [Sus scrofa]. 243 2e-64
Alignment gi|XP_001928507.1| PREDICTED: serpin A11 [Sus scrofa]. 226 2e-59
Alignment gi|XP_001928604.1| PREDICTED: plasma serine protease inhibitor-... 224 5e-59
Alignment gi|XP_003356835.1| PREDICTED: serpin A11 [Sus scrofa]. 224 7e-59
>ref|XP_001928857.3| PREDICTED: serpin A3-8 [Sus scrofa].
Length = 423
Score = 539 bits (1388), Expect = e-153
Identities = 282/345 (81%), Positives = 296/345 (85%), Gaps = 2/345 (0%)
Frame = +2
Query: 77 MRAEGMSXXXXXXXXXXXXCSRVHCVPADDLASKTVTLKGQIKKLPAHNTAVVSSNTDFA 256
MRAEGMS CSRVHCVPADDLASKTVTLKGQI KLPAHNTAVVSSNTDFA
Sbjct: 1 MRAEGMSLFLALGLLVAGLCSRVHCVPADDLASKTVTLKGQITKLPAHNTAVVSSNTDFA 60
Query: 257 FSLYKQLALAERRENVIFSPLSVSIALAFLSLGARGPTLIELLEGLKFNLTKTPEAEIHQ 436
FSLYKQL + +NVIFSPLSVSIALAFLSLGARG TL ELLEGLKFNLTKTPEAEIHQ
Sbjct: 61 FSLYKQLVSLDPNKNVIFSPLSVSIALAFLSLGARGSTLTELLEGLKFNLTKTPEAEIHQ 120
Query: 437 GFQHLLQALSQPSNLLQLNVGNAMFVDERLKLLDKFVQDARELYFSEVFSISFKDSDAAI 616
GFQHLL+ALSQPSNLLQLNVGNAMFVDERLKLLDKFVQDARELYFSEVFSISFKDSDAA+
Sbjct: 121 GFQHLLRALSQPSNLLQLNVGNAMFVDERLKLLDKFVQDARELYFSEVFSISFKDSDAAV 180
Query: 617 EFINNYVKNKTKGKIVDLFKQLSPDTVLVLVNCIYFKAKWKMPFNPNFTTGADFHVSKNR 796
EFINNYVKNKTKGKIVDLFKQLSPDTVLVLVNCIYFKAKWK PF+P+FTT ADFHVSKNR
Sbjct: 181 EFINNYVKNKTKGKIVDLFKQLSPDTVLVLVNCIYFKAKWKTPFDPSFTTEADFHVSKNR 240
Query: 797 TVRVPMMGITGRTVPYFRDQELACTVVELPYTSNDSALFILPDDGRMEDVESQAAPGDTE 976
TVRVPMMGI+GRT+PYFRD+ELACTVVELPYTSNDSALFILPDDGRM VE+Q P E
Sbjct: 241 TVRVPMMGISGRTLPYFRDEELACTVVELPYTSNDSALFILPDDGRMAAVEAQLLP---E 297
Query: 977 EVEETPCSPNG*LPSTCH--GFPSPGDYKLHDILPHLGIKKVFTH 1105
+ S + + H F GDY LHDILPHLGIKKVF+H
Sbjct: 298 TLRRWRDSLHQRRITALHLPRFSVSGDYTLHDILPHLGIKKVFSH 342
>ref|NP_998952.1| alpha-1-antichymotrypsin 2 [Sus scrofa].
Length = 415
Score = 460 bits (1183), Expect = e-130
Identities = 239/322 (74%), Positives = 262/322 (81%)
Frame = +2
Query: 134 CSRVHCVPADDLASKTVTLKGQIKKLPAHNTAVVSSNTDFAFSLYKQLALAERRENVIFS 313
CSRVHCVPADD ASK VTLK QIKKLPAHNTAVVSSNTDFAFSLYKQLAL ENVIFS
Sbjct: 15 CSRVHCVPADDPASKIVTLKDQIKKLPAHNTAVVSSNTDFAFSLYKQLALTNPHENVIFS 74
Query: 314 PLSVSIALAFLSLGARGPTLIELLEGLKFNLTKTPEAEIHQGFQHLLQALSQPSNLLQLN 493
PLSVS+ALAFLSLGARGPTL ELLEGLKFNLTKTPEAEIHQGFQHLL L + SNLLQL
Sbjct: 75 PLSVSMALAFLSLGARGPTLTELLEGLKFNLTKTPEAEIHQGFQHLLSTLDRSSNLLQLR 134
Query: 494 VGNAMFVDERLKLLDKFVQDARELYFSEVFSISFKDSDAAIEFINNYVKNKTKGKIVDLF 673
+GNAMF+DE+L+LLDKFVQDA ELY SE F +F+D +AA IN+YVKNKT+GKIVDLF
Sbjct: 135 LGNAMFIDEQLELLDKFVQDAHELYHSEAFPTNFQDLEAARRLINDYVKNKTEGKIVDLF 194
Query: 674 KQLSPDTVLVLVNCIYFKAKWKMPFNPNFTTGADFHVSKNRTVRVPMMGITGRTVPYFRD 853
K+L P T +VLVN IYFKAKWK PFNPN TT ADFHVSKNRTVRVPMMGI TVPYFRD
Sbjct: 195 KKLDPLTKVVLVNYIYFKAKWKTPFNPNLTTEADFHVSKNRTVRVPMMGIRALTVPYFRD 254
Query: 854 QELACTVVELPYTSNDSALFILPDDGRMEDVESQAAPGDTEEVEETPCSPNG*LPSTCHG 1033
+ELACTVVELPYTSNDSALFILPDDGRM VE++ P +T P +
Sbjct: 255 EELACTVVELPYTSNDSALFILPDDGRMAAVEAKLLP-ETLRRWRDFLQPRWIVELYLPK 313
Query: 1034 FPSPGDYKLHDILPHLGIKKVF 1099
F DY+LH+ILP LGI+++F
Sbjct: 314 FSISSDYRLHEILPQLGIEEIF 335
>ref|XP_001928879.1| PREDICTED: serpin A3-6 [Sus scrofa].
Length = 423
Score = 459 bits (1182), Expect = e-130
Identities = 244/342 (71%), Positives = 267/342 (78%)
Frame = +2
Query: 77 MRAEGMSXXXXXXXXXXXXCSRVHCVPADDLASKTVTLKGQIKKLPAHNTAVVSSNTDFA 256
MRAEGMS CSRVHCVPADDLASK VTLKGQI KLPAHNTAVVSSNTDFA
Sbjct: 1 MRAEGMSLFLALGLLVAGLCSRVHCVPADDLASKIVTLKGQITKLPAHNTAVVSSNTDFA 60
Query: 257 FSLYKQLALAERRENVIFSPLSVSIALAFLSLGARGPTLIELLEGLKFNLTKTPEAEIHQ 436
FSLYKQL + +NVIFSPLSVSIALAFLSLGA+G TL ELLEGLKFNLTKTPEAEIHQ
Sbjct: 61 FSLYKQLVSLDPSKNVIFSPLSVSIALAFLSLGAQGSTLTELLEGLKFNLTKTPEAEIHQ 120
Query: 437 GFQHLLQALSQPSNLLQLNVGNAMFVDERLKLLDKFVQDARELYFSEVFSISFKDSDAAI 616
GFQHLLQALSQPSNLLQLNVGNAMFVDE LKLLDKFVQDARELY SE F +F+D +AA
Sbjct: 121 GFQHLLQALSQPSNLLQLNVGNAMFVDEHLKLLDKFVQDARELYHSEAFPTNFQDLEAAR 180
Query: 617 EFINNYVKNKTKGKIVDLFKQLSPDTVLVLVNCIYFKAKWKMPFNPNFTTGADFHVSKNR 796
IN+YVKNKT+GKIV+L K+L P TV VLVN IYFKA+W F+PN TT ADF+VSKN+
Sbjct: 181 RLINDYVKNKTEGKIVELIKKLFPRTVAVLVNYIYFKAQWMTHFDPNLTTEADFYVSKNK 240
Query: 797 TVRVPMMGITGRTVPYFRDQELACTVVELPYTSNDSALFILPDDGRMEDVESQAAPGDTE 976
TV+VPMMGI TVPYFRD+ELACTVVELPYTSNDS LFILPDDGRM VE+ P
Sbjct: 241 TVKVPMMGIKNLTVPYFRDEELACTVVELPYTSNDSTLFILPDDGRMAAVEANLLPEMLR 300
Query: 977 EVEETPCSPNG*LPSTCHGFPSPGDYKLHDILPHLGIKKVFT 1102
++ P F DYKL +ILP LGIK++F+
Sbjct: 301 RWRDS-LQPRRIDALHLPRFSISSDYKLEEILPRLGIKEIFS 341
>ref|XP_001928637.3| PREDICTED: serpin A3-5 [Sus scrofa].
Length = 393
Score = 440 bits (1132), Expect = e-124
Identities = 241/363 (66%), Positives = 265/363 (73%)
Frame = +2
Query: 17 ALRAGSGSGSTQRIPLCEADMRAEGMSXXXXXXXXXXXXCSRVHCVPADDLASKTVTLKG 196
ALRAG GSGSTQRI LCEA ADD ASK VTLK
Sbjct: 40 ALRAGGGSGSTQRILLCEA----------------------------ADDPASKIVTLKD 71
Query: 197 QIKKLPAHNTAVVSSNTDFAFSLYKQLALAERRENVIFSPLSVSIALAFLSLGARGPTLI 376
QI+KLPAHNTAVVSSNTDFAFSLYKQLAL ENVIFSPLSVS+ALAFLSLGARGPTL
Sbjct: 72 QIRKLPAHNTAVVSSNTDFAFSLYKQLALTNPHENVIFSPLSVSMALAFLSLGARGPTLT 131
Query: 377 ELLEGLKFNLTKTPEAEIHQGFQHLLQALSQPSNLLQLNVGNAMFVDERLKLLDKFVQDA 556
ELLEGLKFNLTKTPEAEIHQGFQHLL L + SNLLQL +GNAMF+DE+L+LLDKFVQDA
Sbjct: 132 ELLEGLKFNLTKTPEAEIHQGFQHLLSTLDRSSNLLQLRLGNAMFIDEQLELLDKFVQDA 191
Query: 557 RELYFSEVFSISFKDSDAAIEFINNYVKNKTKGKIVDLFKQLSPDTVLVLVNCIYFKAKW 736
ELY SE F +F+D +AA IN+YVKNKT+GKIVDLFK+L P T +VLVN IYFKAKW
Sbjct: 192 HELYHSEAFPTNFQDLEAARRLINDYVKNKTEGKIVDLFKKLDPLTKVVLVNYIYFKAKW 251
Query: 737 KMPFNPNFTTGADFHVSKNRTVRVPMMGITGRTVPYFRDQELACTVVELPYTSNDSALFI 916
K PF+P T + FHVSKNRTV+VPMM + G PYFRD+ELACTVVELPYTSNDSALFI
Sbjct: 252 KTPFDPEHTIESTFHVSKNRTVKVPMMSLRGLETPYFRDEELACTVVELPYTSNDSALFI 311
Query: 917 LPDDGRMEDVESQAAPGDTEEVEETPCSPNG*LPSTCHGFPSPGDYKLHDILPHLGIKKV 1096
LPDDGRM VE++ P +T P F GDY+L D L LGI+KV
Sbjct: 312 LPDDGRMAAVEAKLLP-ETLRRWRDSLQPRRIDALYLPRFSVSGDYQLKDTLKQLGIQKV 370
Query: 1097 FTH 1105
FTH
Sbjct: 371 FTH 373
>ref|XP_003356842.1| PREDICTED: serpin A3-6 [Sus scrofa].
Length = 345
Score = 316 bits (810), Expect = 1e-86
Identities = 162/217 (74%), Positives = 182/217 (83%)
Frame = +2
Query: 77 MRAEGMSXXXXXXXXXXXXCSRVHCVPADDLASKTVTLKGQIKKLPAHNTAVVSSNTDFA 256
MRAEGMS CSRVHCVPADDLASK VTLK QIKKLP HNTAVVSSNTDFA
Sbjct: 1 MRAEGMSLFLALGLLVAGLCSRVHCVPADDLASKIVTLKDQIKKLPVHNTAVVSSNTDFA 60
Query: 257 FSLYKQLALAERRENVIFSPLSVSIALAFLSLGARGPTLIELLEGLKFNLTKTPEAEIHQ 436
FSLYKQL+L R +N+IFSPLSVS+ALAFLSLGARGPTL ELLEGLKFN+T+TPEAEIHQ
Sbjct: 61 FSLYKQLSLTNRHKNIIFSPLSVSMALAFLSLGARGPTLTELLEGLKFNVTETPEAEIHQ 120
Query: 437 GFQHLLQALSQPSNLLQLNVGNAMFVDERLKLLDKFVQDARELYFSEVFSISFKDSDAAI 616
GFQHLL+ L++PSNLLQL +GNAMF+DE+L+LLDKFVQDARELY SE F +F+D +AA
Sbjct: 121 GFQHLLRTLNRPSNLLQLRLGNAMFIDEQLELLDKFVQDARELYHSEAFPTNFQDLEAAR 180
Query: 617 EFINNYVKNKTKGKIVDLFKQLSPDTVLVLVNCIYFK 727
IN+YVKNKT+GKIV+L K+L P T VLVN IYFK
Sbjct: 181 RLINDYVKNKTEGKIVELIKRLIPVTEAVLVNYIYFK 217
>ref|XP_003356841.1| PREDICTED: serpin A3-8-like, partial [Sus scrofa].
Length = 201
Score = 257 bits (656), Expect = 9e-69
Identities = 137/194 (70%), Positives = 153/194 (78%)
Frame = +2
Query: 143 VHCVPADDLASKTVTLKGQIKKLPAHNTAVVSSNTDFAFSLYKQLALAERRENVIFSPLS 322
VHCVP + T Q + P A+V SNTDFAFSLYKQL + +NVIFSPLS
Sbjct: 7 VHCVPEGKPDPENGTPNDQHSRTPVDPHAIVPSNTDFAFSLYKQLVSLDPSKNVIFSPLS 66
Query: 323 VSIALAFLSLGARGPTLIELLEGLKFNLTKTPEAEIHQGFQHLLQALSQPSNLLQLNVGN 502
VSIALAFLSLGARGPTL ELLEGLKFNLTKTPEAEIHQGFQHLLQALSQPSNLLQLNVGN
Sbjct: 67 VSIALAFLSLGARGPTLTELLEGLKFNLTKTPEAEIHQGFQHLLQALSQPSNLLQLNVGN 126
Query: 503 AMFVDERLKLLDKFVQDARELYFSEVFSISFKDSDAAIEFINNYVKNKTKGKIVDLFKQL 682
AMFVDE LKLLD+F QDA+ + S+VFS +FKD AA+ FIN+YVKNKTKGKI LF +
Sbjct: 127 AMFVDEHLKLLDEFRQDAQAKFASDVFSTNFKDPGAAVVFINDYVKNKTKGKIPKLFDEH 186
Query: 683 SPDTVLVLVNCIYF 724
+ +V+VLVN IYF
Sbjct: 187 ATFSVMVLVNYIYF 200
>ref|NP_999560.1| alpha-1-antitrypsin precursor [Sus scrofa].
Length = 421
Score = 243 bits (619), Expect = 2e-64
Identities = 133/291 (45%), Positives = 183/291 (62%), Gaps = 6/291 (2%)
Frame = +2
Query: 248 DFAFSLYKQLALAERRENVIFSPLSVSIALAFLSLGARGPTLIELLEGLKFNLTKTPEAE 427
DFAFSLY+Q+A N+ SP++++ A A LSLG +G T E+LEGL+FNLT+ EAE
Sbjct: 59 DFAFSLYRQVARQSNTSNIFLSPVTIARAFAMLSLGTKGATHAEILEGLQFNLTEKAEAE 118
Query: 428 IHQGFQHLLQALSQPSNLLQLNVGNAMFVDERLKLLDKFVQDARELYFSEVFSISFKDSD 607
IH+GFQHLL L+QP N LQL GN +F+DE+ KL+ KF++D + LY SE FSI+F+D++
Sbjct: 119 IHEGFQHLLHTLNQPDNQLQLTTGNGLFIDEKAKLVPKFLEDVKNLYHSEAFSINFRDTE 178
Query: 608 AAIEFINNYVKNKTKGKIVDLFKQLSPDTVLVLVNCIYFKAKWKMPFNPNFTTGADFHVS 787
A + IN+YV+ ++GKIVDL +L DTV LVN I+FK KW+ PF TT DFHV
Sbjct: 179 EAKKCINDYVEKGSQGKIVDLVDELDKDTVFALVNYIFFKGKWEKPFEVEQTTEEDFHVD 238
Query: 788 KNRTVRVPMMGITGRTVPYFRDQELACTVVELPYTSNDSALFILPDDGRMEDVESQAAPG 967
+ TV+VPMM G + D +L+ V+ + Y + +A FILPD G++ +E
Sbjct: 239 EETTVKVPMMNRLGMFDLHHCD-KLSSWVLLMDYVATATAFFILPDQGKLHQLEDML--- 294
Query: 968 DTEEV------EETPCSPNG*LPSTCHGFPSPGDYKLHDILPHLGIKKVFT 1102
T+E+ + P S N LP G Y L +L +LGI KVF+
Sbjct: 295 -TKEIRAKFLEKRYPSSANLHLPK----LTISGTYDLKSLLGNLGITKVFS 340
>ref|XP_001928507.1| PREDICTED: serpin A11 [Sus scrofa].
Length = 421
Score = 226 bits (575), Expect = 2e-59
Identities = 128/300 (42%), Positives = 189/300 (63%), Gaps = 3/300 (1%)
Frame = +2
Query: 212 PAHNTAVVSSNTDFAFSLYKQLALAERRENVIFSPLSVSIALAFLSLGARGPTLIELLEG 391
PA++ + + TDFA LYKQLA AE N+ FSP+S+S LA LSLGA+ T ++LEG
Sbjct: 44 PAYHK-ITPTLTDFALRLYKQLA-AETPGNIFFSPVSISSTLALLSLGAQADTPTQILEG 101
Query: 392 LKFNLTKTPEAEIHQGFQHLLQALSQPSNLLQLNVGNAMFVDERLKLLDKFVQDARELYF 571
L FNLT+ PEA+IH+GFQ L++ L PS+ L++ VGN++F+D++LK F+ + RE+Y
Sbjct: 102 LGFNLTEIPEADIHRGFQSLIRTLDLPSSKLEMKVGNSLFLDKQLKPQQHFLDNIREVYG 161
Query: 572 SEVFSISFKDSDAAIEFINNYVKNKTKGKIVDLFKQLSPDTVLVLVNCIYFKAKWKMPFN 751
+ FS +F DS IN+Y++ +T G++VD ++ + DT++VL+N I+FKAKWK PFN
Sbjct: 162 ALAFSANFTDSGTTRRQINDYLRKQTYGQVVDCLEEFAQDTLMVLLNYIFFKAKWKHPFN 221
Query: 752 PNFTTGAD-FHVSKNRTVRVPMMGITGRTVPYFRDQELACTVVELPYTSNDSALFILPDD 928
P T + F V + ++RVPMM + D E+ACTV+++ Y+ N AL ILPD
Sbjct: 222 PYQTQKQESFFVDERTSLRVPMMR-QKEMHRFLYDHEVACTVLQIEYSGNAQALLILPDP 280
Query: 929 GRMEDVESQAAPGDTEEVEE--TPCSPNG*LPSTCHGFPSPGDYKLHDILPHLGIKKVFT 1102
G+M VE+ P + ++ P + LP F G Y L +ILP +G+ +FT
Sbjct: 281 GKMAQVEAALQPETLRKWDQLLLPSLLDLHLPR----FSISGTYNLEEILPRIGLTNLFT 336
>ref|XP_001928604.1| PREDICTED: plasma serine protease inhibitor-like [Sus scrofa].
Length = 408
Score = 224 bits (572), Expect = 5e-59
Identities = 132/306 (43%), Positives = 175/306 (57%), Gaps = 2/306 (0%)
Frame = +2
Query: 191 KGQIKKLPAHNTAVVSSNTDFAFSLYKQLALAERRENVIFSPLSVSIALAFLSLGARGPT 370
K ++ KLP V DF F LY+ LA A +NV FSPLS+S++LA LSLGA+ T
Sbjct: 28 KKRVLKLPPAVATVAPGIRDFTFDLYRTLAAASPEQNVFFSPLSISMSLAMLSLGAQSST 87
Query: 371 LIELLEGLKFNLTKTPEAEIHQGFQHLLQALSQPSNLLQLNVGNAMFVDERLKLLDKFVQ 550
++LEGL N + PE E+H Q LL+ L QP LQL++GNA+F L + + F+
Sbjct: 88 KAQILEGLGLNPQEGPEEELHSASQRLLRELGQPREDLQLSLGNALFTKPTLSIQEAFLG 147
Query: 551 DARELYFSEVFSISFKDSDAAIEFINNYVKNKTKGKIVDLFKQLSPDTVLVLVNCIYFKA 730
R Y ++VF F+D + A + INNYV +TKGKIVDL K L V+V+VN I+FKA
Sbjct: 148 TLRTRYLADVFPTDFEDPEGAQKQINNYVVKQTKGKIVDLVKGLDGTEVMVMVNYIFFKA 207
Query: 731 KWKMPFNPNFTTGADFHVSKNRTVRVPMMGITGRTVPYFRDQELACTVVELPYTSNDSAL 910
KW+ FN T DFHV+ VRVPMM + Y D+ L+C VV +PY N +A
Sbjct: 208 KWETSFNHKITHEQDFHVTSETVVRVPMMKREDQFY-YLLDRNLSCKVVGVPYQGNATAF 266
Query: 911 FILPDDGRMEDVESQAAPGDTEEV--EETPCSPNG*LPSTCHGFPSPGDYKLHDILPHLG 1084
F+LP +G ME VE G E+ + S L F G Y+L ++LP LG
Sbjct: 267 FVLPQEGGMEQVEK----GLKEKTLRKWLKMSMKRQLELHLPKFSIEGSYQLENVLPKLG 322
Query: 1085 IKKVFT 1102
I+ VFT
Sbjct: 323 IRDVFT 328
>ref|XP_003356835.1| PREDICTED: serpin A11 [Sus scrofa].
Length = 422
Score = 224 bits (571), Expect = 7e-59
Identities = 127/300 (42%), Positives = 189/300 (63%), Gaps = 3/300 (1%)
Frame = +2
Query: 212 PAHNTAVVSSNTDFAFSLYKQLALAERRENVIFSPLSVSIALAFLSLGARGPTLIELLEG 391
PA++ + + TDFA LYKQLA AE N+ FSP+S+S LA LSLGA+ T ++LEG
Sbjct: 45 PAYHK-ITPTLTDFALRLYKQLA-AETPGNIFFSPVSISSTLALLSLGAQADTPTQILEG 102
Query: 392 LKFNLTKTPEAEIHQGFQHLLQALSQPSNLLQLNVGNAMFVDERLKLLDKFVQDARELYF 571
L FNLT+ PEA+IH+GFQ L++ L PS+ L++ VGN++F+D++LK F+ + RE+Y
Sbjct: 103 LGFNLTEIPEADIHRGFQSLIRTLGLPSSKLEMKVGNSLFLDKQLKPQQHFLDNIREVYG 162
Query: 572 SEVFSISFKDSDAAIEFINNYVKNKTKGKIVDLFKQLSPDTVLVLVNCIYFKAKWKMPFN 751
+ FS +F DS IN+Y++ +T G++VD ++ + DT++VL+N I+FKAKWK PFN
Sbjct: 163 ALAFSANFTDSGTTRRQINDYLRKQTYGQVVDCLEEFAQDTLMVLLNYIFFKAKWKHPFN 222
Query: 752 PNFTTGAD-FHVSKNRTVRVPMMGITGRTVPYFRDQELACTVVELPYTSNDSALFILPDD 928
P T + F V + ++RVPMM + D E+ACTV+++ Y+ N AL ILPD
Sbjct: 223 PYQTQKQESFFVDERTSLRVPMMR-QKEMHRFLYDHEVACTVLQIEYSGNAQALLILPDP 281
Query: 929 GRMEDVESQAAPGDTEEVEE--TPCSPNG*LPSTCHGFPSPGDYKLHDILPHLGIKKVFT 1102
G+M VE+ P + ++ P + LP F G Y L +ILP +G+ +F+
Sbjct: 282 GKMAQVEAALQPETLRKWDQLLLPSLLDLHLPR----FSISGTYNLEEILPRIGLTNLFS 337
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 28,076,208
Number of extensions: 825478
Number of successful extensions: 4718
Number of sequences better than 1.0e-05: 38
Number of HSP's gapped: 4605
Number of HSP's successfully gapped: 42
Length of query: 369
Length of database: 11,343,932
Length adjustment: 100
Effective length of query: 269
Effective length of database: 8,854,232
Effective search space: 2381788408
Effective search space used: 2381788408
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-000796
(1107 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr07 1287 0.0
>Sscrofa_Chr07
|| Length = 134764511
Score = 1287 bits (649), Expect = 0.0
Identities = 655/657 (99%)
Strand = Plus / Plus
Query: 72 cagacatgagggcggagggaatgtccctcttcctggctctggggctcctggtggctgggc 131
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123036214 cagacatgagggcggagggaatgtccctcttcctggctctggggctcctggtggctgggc 123036273
Query: 132 tctgctccagggtccactgcgtcccagcggatgaccttgcctcaaagactgtgaccctga 191
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123036274 tctgctccagggtccactgcgtcccagcggatgaccttgcctcaaagactgtgaccctga 123036333
Query: 192 agggccagatcaagaagctgccagcgcacaacaccgccgtcgtctccagcaacaccgact 251
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123036334 agggccagatcaagaagctgccagcgcacaacaccgccgtcgtctccagcaacaccgact 123036393
Query: 252 tcgccttcagcctctacaagcagctggctctggccgaacgcagagaaaatgtcatcttct 311
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123036394 tcgccttcagcctctacaagcagctggctctggccgaacgcagagaaaatgtcatcttct 123036453
Query: 312 ccccgctgagcgtctccatagccttggccttcctgtctctgggggcccgaggccccaccc 371
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123036454 ccccgctgagcgtctccatagccttggccttcctgtctctgggggcccgaggccccaccc 123036513
Query: 372 tgatagagctcctggaaggcctcaagttcaacctcacaaagacccccgaggcagaaatcc 431
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123036514 tgatagagctcctggaaggcctcaagttcaacctcacaaagacccccgaggcagaaatcc 123036573
Query: 432 accagggcttccagcacctcctgcaggccctcagccaacccagcaacctgctgcagctga 491
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123036574 accagggcttccagcacctcctgcaggccctcagccaacccagcaacctgctgcagctga 123036633
Query: 492 acgtgggcaacgccatgttcgtggatgagcggctgaagctgctggacaagttcgtccaag 551
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123036634 acgtgggcaacgccatgttcgtggatgagcggctgaagctgctggacaagttcgtccaag 123036693
Query: 552 atgcccgtgagctgtacttctccgaggtcttctccatcagctttaaggactccgatgctg 611
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123036694 atgcccgtgagctgtacttctccgaggtcttctccatcagctttaaggactccgatgctg 123036753
Query: 612 ccatagagttcatcaacaactatgtaaagaataagaccaaggggaaaattgtggatttgt 671
|| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 123036754 ccgtagagttcatcaacaactatgtgaagaataagaccaaggggaaaattgtggatttgt 123036813
Query: 672 tcaaacaactttccccggataccgtcctggttctggtgaactgcatctactttaaag 728
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123036814 tcaaacaactttccccggataccgtcctggttctggtgaactgcatctactttaaag 123036870
Score = 1128 bits (569), Expect = 0.0
Identities = 635/657 (96%)
Strand = Plus / Plus
Query: 72 cagacatgagggcggagggaatgtccctcttcctggctctggggctcctggtggctgggc 131
||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct: 122963667 cagacatgagggcggagggcatgtccctcttcctggctctgggcctcctggtggctgggc 122963726
Query: 132 tctgctccagggtccactgcgtcccagcggatgaccttgcctcaaagactgtgaccctga 191
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122963727 tctgctccagggtccactgcgtcccagcggatgaccttgcctcaaagactgtgaccctga 122963786
Query: 192 agggccagatcaagaagctgccagcgcacaacaccgccgtcgtctccagcaacaccgact 251
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122963787 agggccagatcacgaagctgccagcgcacaacaccgccgtcgtctccagcaacaccgact 122963846
Query: 252 tcgccttcagcctctacaagcagctggctctggccgaacgcagagaaaatgtcatcttct 311
||||||||||||||||||||||||||| | || | || | || ||||||||||
Sbjct: 122963847 tcgccttcagcctctacaagcagctggtttctttagaccccaataagaacgtcatcttct 122963906
Query: 312 ccccgctgagcgtctccatagccttggccttcctgtctctgggggcccgaggccccaccc 371
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 122963907 ccccgctgagcgtctccatagccttggccttcctgtctctgggggcccgaggctccaccc 122963966
Query: 372 tgatagagctcctggaaggcctcaagttcaacctcacaaagacccccgaggcagaaatcc 431
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122963967 tgacagagctcctggaaggcctcaagttcaacctcacaaagacccccgaggcagaaatcc 122964026
Query: 432 accagggcttccagcacctcctgcaggccctcagccaacccagcaacctgctgcagctga 491
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 122964027 accagggcttccagcacctcctgcgggccctcagccaacccagcaacctgctgcagctga 122964086
Query: 492 acgtgggcaacgccatgttcgtggatgagcggctgaagctgctggacaagttcgtccaag 551
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122964087 acgtgggcaacgccatgttcgtggatgagcggctgaagctgctggacaagttcgtccaag 122964146
Query: 552 atgcccgtgagctgtacttctccgaggtcttctccatcagctttaaggactccgatgctg 611
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122964147 atgcccgtgagctgtacttctccgaggtcttctccatcagctttaaggactccgatgctg 122964206
Query: 612 ccatagagttcatcaacaactatgtaaagaataagaccaaggggaaaattgtggatttgt 671
|| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 122964207 ccgtagagttcatcaacaactatgtgaagaataagaccaaggggaaaattgtggatttgt 122964266
Query: 672 tcaaacaactttccccggataccgtcctggttctggtgaactgcatctactttaaag 728
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122964267 tcaaacaactttccccggataccgtcctggttctggtgaactgcatctactttaaag 122964323
Score = 825 bits (416), Expect = 0.0
Identities = 488/512 (95%)
Strand = Plus / Minus
Query: 72 cagacatgagggcggagggaatgtccctcttcctggctctggggctcctggtggctgggc 131
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 123101427 cagacatgagggcggagggaatgtccctcttcctggctctgggcctcctggtggctgggc 123101368
Query: 132 tctgctccagggtccactgcgtcccagcggatgaccttgcctcaaagactgtgaccctga 191
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 123101367 tctgctccagggtccactgcgtcccagcggatgaccttgcctcaaagattgtgaccctga 123101308
Query: 192 agggccagatcaagaagctgccagcgcacaacaccgccgtcgtctccagcaacaccgact 251
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123101307 agggccagatcacgaagctgccagcgcacaacaccgccgtcgtctccagcaacaccgact 123101248
Query: 252 tcgccttcagcctctacaagcagctggctctggccgaacgcagagaaaatgtcatcttct 311
||||||||||||||||||||||||||| | || | ||| | || ||||||||||
Sbjct: 123101247 tcgccttcagcctctacaagcagctggtttctttagaccccagtaagaacgtcatcttct 123101188
Query: 312 ccccgctgagcgtctccatagccttggccttcctgtctctgggggcccgaggccccaccc 371
|||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||
Sbjct: 123101187 ccccgctgagcgtctccatagccttggccttcctgtctctgggggcccaaggctccaccc 123101128
Query: 372 tgatagagctcctggaaggcctcaagttcaacctcacaaagacccccgaggcagaaatcc 431
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123101127 tgacagagctcctggaaggcctcaagttcaacctcacaaagacccccgaggcagaaatcc 123101068
Query: 432 accagggcttccagcacctcctgcaggccctcagccaacccagcaacctgctgcagctga 491
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123101067 accagggcttccagcacctcctgcaggccctcagccaacccagcaacctgctgcagctga 123101008
Query: 492 acgtgggcaacgccatgttcgtggatgagcggctgaagctgctggacaagttcgtccaag 551
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 123101007 acgtgggcaacgccatgttcgtggatgagcatctgaagctgctggacaagttcgtccaag 123100948
Query: 552 atgcccgtgagctgtacttctccgaggtcttc 583
||||||||||||||||| |||||||| ||||
Sbjct: 123100947 atgcccgtgagctgtaccactccgaggccttc 123100916
Score = 670 bits (338), Expect = 0.0
Identities = 543/606 (89%), Gaps = 4/606 (0%)
Strand = Plus / Minus
Query: 72 cagacatgagggcggagggaatgtccctcttcctggctctggggctcctggtggctgggc 131
|||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||| |
Sbjct: 123117426 cagacacgagggtagagggaatgtccctcttcctggctctgggcctcctggtggctggac 123117367
Query: 132 tctgctccagggtccactgcgtcccagcggatgaccttgcctcaaagactgtgaccctga 191
|||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 123117366 tctgctccagggtccactgcgtcccagcggatgaccctgcctcaaagattgtgaccctga 123117307
Query: 192 agggccagatcaagaagctgccagcgcacaacaccgccgtcgtctccagcaacaccgact 251
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123117306 aggaccagatcaagaagctgccagcgcacaacaccgccgtcgtctccagcaacaccgact 123117247
Query: 252 tcgccttcagcctctacaagcagctggctctggccgaacgcaga-gaaaatgtcatcttc 310
||||||||||||||||||||||||||||||| | ||||| | | || ||||||||||||
Sbjct: 123117246 tcgccttcagcctctacaagcagctggctct-gacgaacccgcatgagaatgtcatcttc 123117188
Query: 311 tccccgctgagcgtctccatagccttggccttcctgtctctgggggcccgaggccccacc 370
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 123117187 tccccgctgagcgtctccatggccttggccttcctgtctctgggggcccgaggccccacc 123117128
Query: 371 ctgatagagctcctggaaggcctcaagttcaacctcacaaagacccccgaggcagaaatc 430
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123117127 ctgacagagctcctggaaggcctcaagttcaacctcacaaagacccccgaggcagaaatc 123117068
Query: 431 caccagggcttccagcacctcctgcaggccctcagccaacccagcaacctgctgcagctg 490
|||||||||||||||||||||||| | ||| | | || |||||||||||||||
Sbjct: 123117067 caccagggcttccagcacctcctgagcacgctcgacaggtcgagtaacctgctgcagctg 123117008
Query: 491 aacgtgggcaacgccatgttcgtggatgagcggctgaagctgctggacaagttcgtccaa 550
| ||||||| ||||||||| | ||||||| |||| |||||||||||||||||||||||
Sbjct: 123117007 aggttgggcaatgccatgttcattgatgagcagctggagctgctggacaagttcgtccaa 123116948
Query: 551 gatgcccgtgagctgtacttctccgaggtcttctccatcagctttaaggactccgatgct 610
||||||| |||||||||| |||||||| |||| ||| | ||| |||| | || |||
Sbjct: 123116947 gatgcccatgagctgtaccactccgaggccttccccactaacttccaggatttagaagct 123116888
Query: 611 gcca-tagagttcatcaacaactatgtaaagaataagaccaaggggaaaattgtggattt 669
|||| ||| |||| || ||||||| |||||||||||| |||| ||||||||||| ||
Sbjct: 123116887 gccaggaga-ctcattaatgactatgtgaagaataagaccgagggaaaaattgtggactt 123116829
Query: 670 gttcaa 675
||||||
Sbjct: 123116828 gttcaa 123116823
Score = 652 bits (329), Expect = 0.0
Identities = 469/513 (91%), Gaps = 2/513 (0%)
Strand = Plus / Plus
Query: 72 cagacatgagggcggagggaatgtccctcttcctggctctggggctcctggtggctgggc 131
||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 122933474 cagacatgagggcagagggaatgtccctcttcctggctctgggcctcctggtggctgggc 122933533
Query: 132 tctgctccagggtccactgcgtcccagcggatgaccttgcctcaaagactgtgaccctga 191
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 122933534 tctgctccagggtccactgcgtcccagcggatgaccttgcctcaaagattgtgaccctga 122933593
Query: 192 agggccagatcaagaagctgccagcgcacaacaccgccgtcgtctccagcaacaccgact 251
||| |||||||||||||||||||| ||||||||||||||| |||||||||||||||||||
Sbjct: 122933594 aggaccagatcaagaagctgccagtgcacaacaccgccgtggtctccagcaacaccgact 122933653
Query: 252 tcgccttcagcctctacaagcagctggctctggccgaacg-cagagaaaatgtcatcttc 310
|||||||||||||||||||||||||| ||||| | | || || | | ||| ||||||||
Sbjct: 122933654 tcgccttcagcctctacaagcagctgtctctgacgaaccgtcata-agaatatcatcttc 122933712
Query: 311 tccccgctgagcgtctccatagccttggccttcctgtctctgggggcccgaggccccacc 370
|||||||||||||||||||| ||||||||||||||||| |||| |||||||||||||||
Sbjct: 122933713 tccccgctgagcgtctccatggccttggccttcctgtccttgggagcccgaggccccacc 122933772
Query: 371 ctgatagagctcctggaaggcctcaagttcaacctcacaaagacccccgaggcagaaatc 430
|||| ||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||
Sbjct: 122933773 ctgacagagctcctggaaggcctcaagttcaatgtcacagagacccctgaggcagaaatc 122933832
Query: 431 caccagggcttccagcacctcctgcaggccctcagccaacccagcaacctgctgcagctg 490
|||||||||||||||||||||||| | | |||| | || ||||||||||||||||||
Sbjct: 122933833 caccagggcttccagcacctcctgaggacgctcaacaggccgagcaacctgctgcagctg 122933892
Query: 491 aacgtgggcaacgccatgttcgtggatgagcggctgaagctgctggacaagttcgtccaa 550
| ||||||||||||||||| | ||||||| |||| |||||||||||||||||||||||
Sbjct: 122933893 aggttgggcaacgccatgttcattgatgagcagctggagctgctggacaagttcgtccaa 122933952
Query: 551 gatgcccgtgagctgtacttctccgaggtcttc 583
|||||||||||||||||| |||||||| ||||
Sbjct: 122933953 gatgcccgtgagctgtaccactccgaggccttc 122933985
Score = 476 bits (240), Expect = e-131
Identities = 291/308 (94%)
Strand = Plus / Minus
Query: 237 ccagcaacaccgacttcgccttcagcctctacaagcagctggctctggccgaacgcagag 296
|||||||||||||||||||||||||||||||||||||||||| | || | |||
Sbjct: 123022910 ccagcaacaccgacttcgccttcagcctctacaagcagctggtttctttagaccccagta 123022851
Query: 297 aaaatgtcatcttctccccgctgagcgtctccatagccttggccttcctgtctctggggg 356
| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123022850 agaacgtcatcttctccccgctgagcgtctccatagccttggccttcctgtctctggggg 123022791
Query: 357 cccgaggccccaccctgatagagctcctggaaggcctcaagttcaacctcacaaagaccc 416
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 123022790 cccgaggccccaccctgacagagctcctggaaggcctcaagttcaacctcacaaagaccc 123022731
Query: 417 ccgaggcagaaatccaccagggcttccagcacctcctgcaggccctcagccaacccagca 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123022730 ccgaggcagaaatccaccagggcttccagcacctcctgcaggccctcagccaacccagca 123022671
Query: 477 acctgctgcagctgaacgtgggcaacgccatgttcgtggatgagcggctgaagctgctgg 536
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 123022670 acctgctgcagctgaacgtgggcaacgccatgttcgtggatgagcatctgaagctgctgg 123022611
Query: 537 acaagttc 544
|| |||||
Sbjct: 123022610 acgagttc 123022603
Score = 460 bits (232), Expect = e-127
Identities = 289/308 (93%)
Strand = Plus / Plus
Query: 237 ccagcaacaccgacttcgccttcagcctctacaagcagctggctctggccgaacgcagag 296
|||||||||||||||||||||||||||||||||||||||||| | || | |||
Sbjct: 122999543 ccagcaacaccgacttcgccttcagcctctacaagcagctggtttctttagaccccagta 122999602
Query: 297 aaaatgtcatcttctccccgctgagcgtctccatagccttggccttcctgtctctggggg 356
| || ||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 122999603 agaacgtcatcttctccccgctgagcgtctccatggccttggccttcctgtctctggggg 122999662
Query: 357 cccgaggccccaccctgatagagctcctggaaggcctcaagttcaacctcacaaagaccc 416
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 122999663 cccgaggccccaccctgacagagctcctggaaggcctcaagttcaacctcacaaagaccc 122999722
Query: 417 ccgaggcagaaatccaccagggcttccagcacctcctgcaggccctcagccaacccagca 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122999723 ccgaggcagaaatccaccagggcttccagcacctcctgcaggccctcagccaacccagca 122999782
Query: 477 acctgctgcagctgaacgtgggcaacgccatgttcgtggatgagcggctgaagctgctgg 536
||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||
Sbjct: 122999783 acctgctgcagctgaacgtgggcaacgccatgttcgtggatgaacatctgaagctgctgg 122999842
Query: 537 acaagttc 544
|| |||||
Sbjct: 122999843 acgagttc 122999850
Score = 422 bits (213), Expect = e-115
Identities = 263/277 (94%), Gaps = 2/277 (0%)
Strand = Plus / Minus
Query: 727 agccaagtggaagatgcccttcaatcccaactttaccacgggggcagatttccacgtgag 786
|||||||||||||| |||||||||||||||||| ||||||| ||||||||||||||||||
Sbjct: 123115289 agccaagtggaagacgcccttcaatcccaacttaaccacggaggcagatttccacgtgag 123115230
Query: 787 caagaacaggacggtgagggtgcccatgatgggcattacgggccgcaccgtgccttactt 846
|||||||||||||||||||||||||||||||||||||| || || ||||||||||||||
Sbjct: 123115229 caagaacaggacggtgagggtgcccatgatgggcattagggccctgaccgtgccttactt 123115170
Query: 847 ccgggaccaggagctggcctgcacggtggtggagctcccgtacaccagcaacgacagcgc 906
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123115169 ccgggacgaggagctggcctgcacggtggtggagctcccgtacaccagcaacgacagcgc 123115110
Query: 907 gctcttcatcctccctgacgacggcaggatggaggacgtggaaagccaagctgctcccgg 966
|||||||||||||||||||||||||||||||| || ||||| |||||||||||||||| |
Sbjct: 123115109 gctcttcatcctccctgacgacggcaggatggcggccgtgg-aagccaagctgctccctg 123115051
Query: 967 agacactgaggaggtggaagagactccctgcagccca 1003
||||||||||||||||| ||||||| |||||||||||
Sbjct: 123115050 agacactgaggaggtgg-agagacttcctgcagccca 123115015
Score = 404 bits (204), Expect = e-110
Identities = 257/272 (94%), Gaps = 2/272 (0%)
Strand = Plus / Plus
Query: 727 agccaagtggaagatgcccttcaatcccaactttaccacgggggcagatttccacgtgag 786
|||||||||||||| |||||| |||||| ||||||||||| ||||||||||||||||||
Sbjct: 122965989 agccaagtggaagacgccctttgatcccagctttaccacggaggcagatttccacgtgag 122966048
Query: 787 caagaacaggacggtgagggtgcccatgatgggcattacgggccgcaccgtgccttactt 846
||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||
Sbjct: 122966049 caagaacaggacggtgagggtgcccatgatgggcatttcgggccggaccctgccttactt 122966108
Query: 847 ccgggaccaggagctggcctgcacggtggtggagctcccgtacaccagcaacgacagcgc 906
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122966109 ccgggacgaggagctggcctgcacggtggtggagctcccgtacaccagcaacgacagcgc 122966168
Query: 907 gctcttcatcctccctgacgacggcaggatggaggacgtggaaagccaagctgctcccgg 966
|||||||||||||||||||||||||||||||| || ||||| ||||| ||||||||||||
Sbjct: 122966169 gctcttcatcctccctgacgacggcaggatggcggccgtgg-aagcccagctgctcccgg 122966227
Query: 967 agacactgaggaggtggaagagactccctgca 998
|||| |||||||||||| ||||||||||||||
Sbjct: 122966228 agacgctgaggaggtgg-agagactccctgca 122966258
Score = 321 bits (162), Expect = 5e-85
Identities = 234/246 (95%), Gaps = 9/246 (3%)
Strand = Plus / Plus
Query: 727 agccaagtggaagatgcccttcaatcccaactttaccacgggggcagatttccacgtgag 786
||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||
Sbjct: 123038539 agccaagtggaagatgcccttca-tcccaactttac-acgggggcagatttccacgtgag 123038596
Query: 787 caagaacaggacggtgagggtgcccatgatgggcattacgggccgcaccgtgccttactt 846
||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 123038597 caagaacag-acggtgagg-tgcccatgatgggcattacgggccgcaccgtgccttactt 123038654
Query: 847 ccgggaccaggagctggcctgcacggtggtggagctcccgtacaccagcaacgacagcgc 906
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123038655 ccgggaacaggagctggcctgcacggtggtggagctcccgtacaccagcaacgacagcgc 123038714
Query: 907 gctcttcatcctccctgacgacggcaggatggaggacgtggaaagccaagctgctcccgg 966
|||| ||||||||||||||||| ||||||| || |||||||||| |||| |||||||||
Sbjct: 123038715 gctc-tcatcctccctgacgac-gcaggat-gaagacgtggaaa-ccaa-ctgctcccga 123038769
Query: 967 agacac 972
||||||
Sbjct: 123038770 agacac 123038775
Score = 313 bits (158), Expect = 1e-82
Identities = 232/254 (91%), Gaps = 2/254 (0%)
Strand = Plus / Minus
Query: 750 atcccaactttaccacgggggcagatttccacgtgagcaagaacaggacggtgagggtgc 809
|||||||| |||| |||| |||||||||| ||||||||||||||| ||| |||| |||||
Sbjct: 123099144 atcccaaccttactacggaggcagatttctacgtgagcaagaacaagacagtgaaggtgc 123099085
Query: 810 ccatgatgggcattacgggccgcaccgtgccttacttccgggaccaggagctggcctgca 869
||||||||||||||| | || |||||||| |||||||||||| |||||||||||||||
Sbjct: 123099084 ccatgatgggcattaagaacctgaccgtgccatacttccgggacgaggagctggcctgca 123099025
Query: 870 cggtggtggagctcccgtacaccagcaacgacagcgcgctcttcatcctccctgacgacg 929
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 123099024 cggtggtggagctcccgtacaccagcaacgacagcacgctcttcatcctccctgacgacg 123098965
Query: 930 gcaggatggaggacgtggaaagccaagctgctcccggagacactgaggaggtggaagaga 989
||||||||| || ||||| ||||||| ||||||||||||| |||||||||||| |||||
Sbjct: 123098964 gcaggatggcggccgtgg-aagccaatctgctcccggagatgctgaggaggtgg-agaga 123098907
Query: 990 ctccctgcagccca 1003
||||||||||||||
Sbjct: 123098906 ctccctgcagccca 123098893
Score = 262 bits (132), Expect = 4e-67
Identities = 206/228 (90%), Gaps = 2/228 (0%)
Strand = Plus / Minus
Query: 776 ttccacgtgagcaagaacaggacggtgagggtgcccatgatgggcattacgggccgcacc 835
||||||||||||||||||||||| |||| ||||||||||||| || || ||||
Sbjct: 123020815 ttccacgtgagcaagaacaggacagtgaaggtgcccatgatgagccttcgaggcctggaa 123020756
Query: 836 gtgccttacttccgggaccaggagctggcctgcacggtggtggagctcccgtacaccagc 895
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 123020755 acaccttacttccgggacgaggagctggcctgcacggtggtggagctcccgtacaccagc 123020696
Query: 896 aacgacagcgcgctcttcatcctccctgacgacggcaggatggaggacgtggaaagccaa 955
|||||||||||||||||||||||||||||||| |||||||||| || ||||| |||||||
Sbjct: 123020695 aacgacagcgcgctcttcatcctccctgacgatggcaggatggcggccgtgg-aagccaa 123020637
Query: 956 gctgctcccggagacactgaggaggtggaagagactccctgcagccca 1003
||||||||||||||| |||||||||||| |||||||||||||||||||
Sbjct: 123020636 gctgctcccggagacgctgaggaggtgg-agagactccctgcagccca 123020590
Score = 159 bits (80), Expect = 4e-36
Identities = 93/96 (96%), Gaps = 1/96 (1%)
Strand = Plus / Plus
Query: 1005 acggataactgccctccacctgccacggttttccgtctccgggggactataagctgcatg 1064
|||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||
Sbjct: 122968309 acggataactgccctccacctgccacggttttccgtctccgggg-actatacgctgcatg 122968367
Query: 1065 acatccttccccacctgggcattaaaaaagtcttca 1100
||||||||||||||||||||||||| ||||||||||
Sbjct: 122968368 acatccttccccacctgggcattaagaaagtcttca 122968403
Score = 129 bits (65), Expect = 4e-27
Identities = 77/81 (95%)
Strand = Plus / Plus
Query: 76 catgagggcggagggaatgtccctcttcctggctctggggctcctggtggctgggctctg 135
||||| ||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 122999382 catgaaggcagagggcatgtcccccttcctggctctggggctcctggtggctgggctctg 122999441
Query: 136 ctccagggtccactgcgtccc 156
|||||||||||||||||||||
Sbjct: 122999442 ctccagggtccactgcgtccc 122999462
Score = 129 bits (65), Expect = 4e-27
Identities = 77/81 (95%)
Strand = Plus / Minus
Query: 76 catgagggcggagggaatgtccctcttcctggctctggggctcctggtggctgggctctg 135
||||| ||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 123023071 catgaaggcagagggcatgtcccccttcctggctctggggctcctggtggctgggctctg 123023012
Query: 136 ctccagggtccactgcgtccc 156
|||||||||||||||||||||
Sbjct: 123023011 ctccagggtccactgcgtccc 123022991
Score = 109 bits (55), Expect = 3e-21
Identities = 58/59 (98%)
Strand = Plus / Minus
Query: 16 agcattgcgggcaggcagcggctctgggtccactcagcgcatcccgctctgcgaggcag 74
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122953936 agcattgcgggcaggcggcggctctgggtccactcagcgcatcccgctctgcgaggcag 122953878
Score = 109 bits (55), Expect = 3e-21
Identities = 58/59 (98%)
Strand = Plus / Minus
Query: 16 agcattgcgggcaggcagcggctctgggtccactcagcgcatcccgctctgcgaggcag 74
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123103334 agcattgcgggcaggcggcggctctgggtccactcagcgcatcccgctctgcgaggcag 123103276
Score = 101 bits (51), Expect = 8e-19
Identities = 57/59 (96%)
Strand = Plus / Minus
Query: 16 agcattgcgggcaggcagcggctctgggtccactcagcgcatcccgctctgcgaggcag 74
|||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 123024977 agcattgcgggcaggcggcggctctgggtccactcagcacatcccgctctgcgaggcag 123024919
Score = 101 bits (51), Expect = 8e-19
Identities = 57/59 (96%)
Strand = Plus / Minus
Query: 16 agcattgcgggcaggcagcggctctgggtccactcagcgcatcccgctctgcgaggcag 74
|||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 123119625 agcattgcgggcaggcggcggctctgggtccactcagcgcatcctgctctgcgaggcag 123119567
Score = 93.7 bits (47), Expect = 2e-16
Identities = 56/59 (94%)
Strand = Plus / Plus
Query: 16 agcattgcgggcaggcagcggctctgggtccactcagcgcatcccgctctgcgaggcag 74
||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 122961778 agcattgcgggcaggtggtggctctgggtccactcagcgcatcccgctctgcgaggcag 122961836
Score = 63.9 bits (32), Expect = 2e-07
Identities = 63/72 (87%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 1015 gccctccacctgccacggttttccgtctccgggggactataagctgcatgacatccttcc 1074
|||||||||||||||||||||||| ||||| | |||||||| ||||| || ||||||||
Sbjct: 122936840 gccctccacctgccacggttttccatctcc-agcgactataaactgcaggagatccttcc 122936898
Query: 1075 ccacctgggcat 1086
|| ||||||||
Sbjct: 122936899 ccggctgggcat 122936910
Score = 60.0 bits (30), Expect = 3e-06
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 1005 acggataactgccctccacctgccacggttttccgtctccgg 1046
||||||| ||||||| |||||||||||||||||||||||||
Sbjct: 123001112 acggatagatgccctctacctgccacggttttccgtctccgg 123001153
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 29,547,062
Number of extensions: 277
Number of successful extensions: 277
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 266
Number of HSP's successfully gapped: 32
Length of query: 1107
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 1086
Effective length of database: 2,808,413,156
Effective search space: 3049936687416
Effective search space used: 3049936687416
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)