Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-000820
(1503 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_002696874.1| PREDICTED: endopin 2C-like [Bos taurus]. 539 e-153
Alignment gi|XP_001252647.3| PREDICTED: endopin 2B-like [Bos taurus]. 534 e-152
Alignment gi|NP_001075181.1| SERPINA3-8 [Bos taurus]. 526 e-149
Alignment gi|NP_001012283.2| serpin A3-7 [Bos taurus]. 517 e-147
Alignment gi|NP_001139774.1| serpin A3-6 [Bos taurus]. 509 e-144
Alignment gi|NP_001033293.1| serpin A3-3 [Bos taurus]. 489 e-138
Alignment gi|NP_001139773.1| serpin A3-2 [Bos taurus]. 482 e-136
Alignment gi|NP_777193.2| serpin A3-1 precursor [Bos taurus]. 482 e-136
Alignment gi|NP_001075213.1| serpin A3-5 [Bos taurus]. 481 e-136
Alignment gi|XP_001787316.2| PREDICTED: endopin 2C-like [Bos taurus]. 466 e-131
>ref|XP_002696874.1| PREDICTED: endopin 2C-like [Bos taurus].
Length = 417
Score = 539 bits (1389), Expect = e-153
Identities = 275/424 (64%), Positives = 330/424 (77%), Gaps = 1/424 (0%)
Frame = +1
Query: 109 MKAEGMSPFLALGLLVAGLCSSVHCVPESKPDPENGTPKDQHSRTPVDPHAIVPSNTDFA 288
M+ E MSP LALGLLV+GLCS VHC+PE N TP++QH T VD H++ SNTDFA
Sbjct: 1 MRTERMSPLLALGLLVSGLCSRVHCLPE------NVTPEEQHKVTSVDGHSLASSNTDFA 54
Query: 289 FSLYKQLVSLDPSKNVIFSPLSVSIALAFLSLGARGPTLTELLEGLKFNLTKTPEAEIHQ 468
FSLYKQL DP+KNVIFSPLS+SIALAFLSLGA GPT+TE+LEGLKFNLT+TPE EIHQ
Sbjct: 55 FSLYKQLALKDPNKNVIFSPLSISIALAFLSLGAHGPTVTEILEGLKFNLTETPETEIHQ 114
Query: 469 GFQHLLQALSQPSNLLQLNVGNAMFVDEHLKLLDEFRRDAQAKFASDVFSTNFKDPGAAV 648
GFQHLLQ +QPSN LQL+VGNA+FV E LKLLD+FR+DA+A +AS+V S NFKD AAV
Sbjct: 115 GFQHLLQTFNQPSNQLQLSVGNAIFVPEELKLLDKFRKDAEAFYASEVLSINFKDSEAAV 174
Query: 649 VFINDYVKNKTKGKIPKLFDEHATFSVMVLVNYIYFNAKWKTPFDPEHTIESTFQVSKNR 828
IN+YVKNKT GKI KL ++ + ++L+NYI+F A+WKTPF+P HT ES F VSKN
Sbjct: 175 KLINEYVKNKTHGKIEKLLNDLDVLTNLILLNYIFFKAQWKTPFNPNHTYESEFHVSKNE 234
Query: 829 TVKVPMMSLRGLETPYFRDEELACTVVELPYTSNDSALFILPDDGRMAAVEAKLLPETLR 1008
VKVPMM+LR LETPYFRDEEL CT+VEL YTSNDSALFILPD+G+M +EAKL PETL
Sbjct: 235 RVKVPMMTLR-LETPYFRDEELGCTLVELTYTSNDSALFILPDEGKMQDLEAKLTPETLT 293
Query: 1009 RWRDSLQPRRIDALYLPRFSVSGDYQLKDTLKQLGIQKVFTHEADLSGVTGDNKLGVSKV 1188
RWR+SLQPR ID L LPRFS+S DYQL+D L QLGI+K+FT +AD SG+T D+KL VS+V
Sbjct: 294 RWRNSLQPRHIDELSLPRFSISSDYQLRDILSQLGIKKIFTSDADFSGITNDHKLAVSQV 353
Query: 1189 IHKAVLDVXXXXXXXXXXXXXXXXXS-TLYSLTVSFSSPFLFAVIDKDTGTVLFLGKVAD 1365
IHKAVLDV S L++L +SF+ PFL ++ K+T +++FLGKV +
Sbjct: 354 IHKAVLDVGEEGTEGAAVTAVIMFTSLPLHALNISFNRPFLLSIFCKETQSIIFLGKVTN 413
Query: 1366 PSPA 1377
P A
Sbjct: 414 PKEA 417
>ref|XP_001252647.3| PREDICTED: endopin 2B-like [Bos taurus].
Length = 417
Score = 534 bits (1376), Expect = e-152
Identities = 274/424 (64%), Positives = 329/424 (77%), Gaps = 1/424 (0%)
Frame = +1
Query: 109 MKAEGMSPFLALGLLVAGLCSSVHCVPESKPDPENGTPKDQHSRTPVDPHAIVPSNTDFA 288
M+ E MSP LALGLLV+G CS VHC+PE N TP++QH T VD H++ SNTDFA
Sbjct: 1 MRTERMSPLLALGLLVSGFCSRVHCLPE------NVTPEEQHKGTSVDGHSLASSNTDFA 54
Query: 289 FSLYKQLVSLDPSKNVIFSPLSVSIALAFLSLGARGPTLTELLEGLKFNLTKTPEAEIHQ 468
FSLYKQL DP+KNVIFSPLS+SIALAFLSLGA T+TE+LEGLKFNLT+TPE EIHQ
Sbjct: 55 FSLYKQLALKDPNKNVIFSPLSISIALAFLSLGAHDHTVTEILEGLKFNLTETPETEIHQ 114
Query: 469 GFQHLLQALSQPSNLLQLNVGNAMFVDEHLKLLDEFRRDAQAKFASDVFSTNFKDPGAAV 648
GFQHLLQ +QPSN LQL+VGNAMFV E LKLLD+FR+DA+A +AS+V STNFKD AAV
Sbjct: 115 GFQHLLQTFNQPSNQLQLSVGNAMFVSEELKLLDKFRKDAEAFYASEVLSTNFKDSEAAV 174
Query: 649 VFINDYVKNKTKGKIPKLFDEHATFSVMVLVNYIYFNAKWKTPFDPEHTIESTFQVSKNR 828
IN+YVKNKT GKI KLF++ + ++L+NYI+F A+WKTPF+P HT ES F VS+N
Sbjct: 175 KLINEYVKNKTHGKIEKLFNDLDVLTNLILLNYIFFKAQWKTPFNPNHTYESEFHVSQNE 234
Query: 829 TVKVPMMSLRGLETPYFRDEELACTVVELPYTSNDSALFILPDDGRMAAVEAKLLPETLR 1008
V VPMM+L LETPYFRDEEL CT+VEL YTSNDSALFILPD+G+M +EAKL PETL
Sbjct: 235 RVIVPMMTLY-LETPYFRDEELGCTLVELTYTSNDSALFILPDEGKMQDLEAKLTPETLT 293
Query: 1009 RWRDSLQPRRIDALYLPRFSVSGDYQLKDTLKQLGIQKVFTHEADLSGVTGDNKLGVSKV 1188
RWR+SLQPR ID L LPRFS+S DYQL+D L QLGI+K+FT +AD SG+T D+KL VS+V
Sbjct: 294 RWRNSLQPRHIDELSLPRFSISSDYQLRDILSQLGIKKIFTSDADFSGITNDHKLAVSQV 353
Query: 1189 IHKAVLDVXXXXXXXXXXXXXXXXXST-LYSLTVSFSSPFLFAVIDKDTGTVLFLGKVAD 1365
IHKAVLDV S+ L++LTVSF+ PFL ++ K+T +++FLGKV +
Sbjct: 354 IHKAVLDVGEEGTEGAAVTAVVMATSSLLHTLTVSFNRPFLLSIFCKETQSIIFLGKVTN 413
Query: 1366 PSPA 1377
P A
Sbjct: 414 PKEA 417
>ref|NP_001075181.1| SERPINA3-8 [Bos taurus].
Length = 418
Score = 526 bits (1355), Expect = e-149
Identities = 269/424 (63%), Positives = 328/424 (77%), Gaps = 1/424 (0%)
Frame = +1
Query: 109 MKAEGMSPFLALGLLVAGLCSSVHCVPESKPDPENGTPKDQHSRTPVDPHAIVPSNTDFA 288
M+AE MSP LALGLLV+GLCS VHC+PE N P+++H T VD H++ SNTDFA
Sbjct: 1 MRAERMSPLLALGLLVSGLCSRVHCLPE------NVAPEERHKGTSVDGHSLASSNTDFA 54
Query: 289 FSLYKQLVSLDPSKNVIFSPLSVSIALAFLSLGARGPTLTELLEGLKFNLTKTPEAEIHQ 468
FSLYKQL +P+KNVIFSPLS+SIALAFLSLGARGPT+TE+LEGLKFNLT+TPE EIHQ
Sbjct: 55 FSLYKQLALKNPNKNVIFSPLSISIALAFLSLGARGPTVTEILEGLKFNLTETPEREIHQ 114
Query: 469 GFQHLLQALSQPSNLLQLNVGNAMFVDEHLKLLDEFRRDAQAKFASDVFSTNFKDPGAAV 648
GFQHLLQ LS+PSN LQL+VGN MFV E LKLLD+FR DA A + S+ FSTNFKDP A
Sbjct: 115 GFQHLLQMLSRPSNELQLSVGNTMFVQEQLKLLDKFREDALALYTSEAFSTNFKDPETAK 174
Query: 649 VFINDYVKNKTKGKIPKLFDEHATFSVMVLVNYIYFNAKWKTPFDPEHTIESTFQVSKNR 828
INDYVKNKT+GKI LF + + ++LVNYIYF A+W+TPFDP+ T +S F VSKN+
Sbjct: 175 SLINDYVKNKTRGKIVDLFKDLDPLTKVILVNYIYFKAQWRTPFDPKQTYKSQFHVSKNK 234
Query: 829 TVKVPMMSLRGLETPYFRDEELACTVVELPYTSNDSALFILPDDGRMAAVEAKLLPETLR 1008
TV+VPMMS+ L TPYFRDEEL CT+VEL YTSNDSALFILPD+G+M +EAKL+PE L
Sbjct: 235 TVEVPMMSIGDLVTPYFRDEELDCTLVELTYTSNDSALFILPDEGKMQDLEAKLIPEMLT 294
Query: 1009 RWRDSLQPRRIDALYLPRFSVSGDYQLKDTLKQLGIQKVFTHEADLSGVTGDNKLGVSKV 1188
RWR+SL PR I L LPRFS++ DY+LKD L QL I+KVFT EADLSG+T D++L VS+V
Sbjct: 295 RWRESLYPRGIHELNLPRFSIATDYKLKDILSQLEIKKVFTQEADLSGITDDHELEVSQV 354
Query: 1189 IHKAVLDVXXXXXXXXXXXXXXXXXSTLYS-LTVSFSSPFLFAVIDKDTGTVLFLGKVAD 1365
+HKAVLDV +++ + + +SF+ PFL A++ KDT +++FLGKV +
Sbjct: 355 VHKAVLDVGEEGTEGAAATGVKVGITSINNHIPLSFNRPFLIAIVLKDTQSIIFLGKVTN 414
Query: 1366 PSPA 1377
PS A
Sbjct: 415 PSQA 418
>ref|NP_001012283.2| serpin A3-7 [Bos taurus].
Length = 417
Score = 517 bits (1332), Expect = e-147
Identities = 269/424 (63%), Positives = 323/424 (76%), Gaps = 1/424 (0%)
Frame = +1
Query: 109 MKAEGMSPFLALGLLVAGLCSSVHCVPESKPDPENGTPKDQHSRTPVDPHAIVPSNTDFA 288
M+ E S LALGLLV+G CS VHC+PE N TP++QH T VD H++ SNTDFA
Sbjct: 1 MRTERTSFLLALGLLVSGFCSRVHCLPE------NVTPEEQHKGTSVDGHSLASSNTDFA 54
Query: 289 FSLYKQLVSLDPSKNVIFSPLSVSIALAFLSLGARGPTLTELLEGLKFNLTKTPEAEIHQ 468
FSLYKQL DP+KNVIFSPLS+SIALAFLSLGA T+TE+LEGLKFNLT+TPE EIHQ
Sbjct: 55 FSLYKQLALKDPNKNVIFSPLSISIALAFLSLGAHDHTVTEILEGLKFNLTETPETEIHQ 114
Query: 469 GFQHLLQALSQPSNLLQLNVGNAMFVDEHLKLLDEFRRDAQAKFASDVFSTNFKDPGAAV 648
GFQHLLQ +QPSN LQL+VGNAMFV E LKLLD+FR+DA+A +AS+V STNFKD A V
Sbjct: 115 GFQHLLQTFNQPSNQLQLSVGNAMFVSEELKLLDKFRKDAEAFYASEVLSTNFKDSEADV 174
Query: 649 VFINDYVKNKTKGKIPKLFDEHATFSVMVLVNYIYFNAKWKTPFDPEHTIESTFQVSKNR 828
IN+YVKNKT GKI KLF++ + ++L+NYI+F A+WKTPF+P HT ES F VS+N
Sbjct: 175 KLINEYVKNKTHGKIEKLFNDLDVLTNLILLNYIFFKAQWKTPFNPNHTYESEFHVSQNE 234
Query: 829 TVKVPMMSLRGLETPYFRDEELACTVVELPYTSNDSALFILPDDGRMAAVEAKLLPETLR 1008
V VPMM+L LETPYFRDEEL CT+VEL +TSNDSALFILPD+G+M +EAKL PETL
Sbjct: 235 RVIVPMMTLY-LETPYFRDEELGCTLVELTHTSNDSALFILPDEGKMQDLEAKLTPETLT 293
Query: 1009 RWRDSLQPRRIDALYLPRFSVSGDYQLKDTLKQLGIQKVFTHEADLSGVTGDNKLGVSKV 1188
RWR+SLQPR I L LPRFS+S YQLKD L QLGI+K+FT +AD SG+T D+KL VS V
Sbjct: 294 RWRNSLQPRLIHRLRLPRFSISSHYQLKDILSQLGIKKIFTSDADFSGITDDHKLAVSHV 353
Query: 1189 IHKAVLDVXXXXXXXXXXXXXXXXXST-LYSLTVSFSSPFLFAVIDKDTGTVLFLGKVAD 1365
IHKAVLDV S+ L++LTVSF+ PFL ++ K+T +++FLGKV +
Sbjct: 354 IHKAVLDVGEEGTEGAAVTAVVMATSSLLHTLTVSFNRPFLLSIFCKETQSIIFLGKVTN 413
Query: 1366 PSPA 1377
P A
Sbjct: 414 PKEA 417
>ref|NP_001139774.1| serpin A3-6 [Bos taurus].
Length = 414
Score = 509 bits (1312), Expect = e-144
Identities = 264/423 (62%), Positives = 321/423 (75%)
Frame = +1
Query: 109 MKAEGMSPFLALGLLVAGLCSSVHCVPESKPDPENGTPKDQHSRTPVDPHAIVPSNTDFA 288
M+ E +SP LALG+LVAGLCS VHC+PE N TP++QH T VD H++ SNTDFA
Sbjct: 1 MRTERVSPLLALGILVAGLCSRVHCLPE------NVTPEEQHKVTSVDGHSLASSNTDFA 54
Query: 289 FSLYKQLVSLDPSKNVIFSPLSVSIALAFLSLGARGPTLTELLEGLKFNLTKTPEAEIHQ 468
FSLYKQL DP+KNVIFSPLSVSIALAFLSLGA GPT+TE+LEGLKFNLT+TPE EIHQ
Sbjct: 55 FSLYKQLALKDPNKNVIFSPLSVSIALAFLSLGAHGPTVTEILEGLKFNLTETPETEIHQ 114
Query: 469 GFQHLLQALSQPSNLLQLNVGNAMFVDEHLKLLDEFRRDAQAKFASDVFSTNFKDPGAAV 648
GFQHLLQ +QPSN LQL+VGNA+FV E LKLLD+F DA+ ++S+ F TNF+DP AA
Sbjct: 115 GFQHLLQTFNQPSNQLQLSVGNAIFVQEELKLLDKFIEDARVLYSSEAFPTNFRDPEAAK 174
Query: 649 VFINDYVKNKTKGKIPKLFDEHATFSVMVLVNYIYFNAKWKTPFDPEHTIESTFQVSKNR 828
INDYVKNKT+GKI +LF + + + +VLVNY+YF A+WKT FDP+HT ++ F VS N+
Sbjct: 175 SLINDYVKNKTQGKIEELFKDLSPRTELVLVNYVYFKAQWKTRFDPKHTEKTEFHVSDNK 234
Query: 829 TVKVPMMSLRGLETPYFRDEELACTVVELPYTSNDSALFILPDDGRMAAVEAKLLPETLR 1008
TV+VPMM+L LETPYFRDEEL CT+VEL YTSNDSALFILPD G+M +EAKL PE L
Sbjct: 235 TVEVPMMTL-DLETPYFRDEELGCTLVELTYTSNDSALFILPDKGKMQDLEAKLTPEMLT 293
Query: 1009 RWRDSLQPRRIDALYLPRFSVSGDYQLKDTLKQLGIQKVFTHEADLSGVTGDNKLGVSKV 1188
RWR+SLQPRRI LYLP+FS+ +Y+L DTL Q+GI+K+FT +ADLSG+TG L VS+V
Sbjct: 294 RWRNSLQPRRIHELYLPKFSIKSNYELNDTLSQMGIKKIFT-DADLSGITGTADLVVSQV 352
Query: 1189 IHKAVLDVXXXXXXXXXXXXXXXXXSTLYSLTVSFSSPFLFAVIDKDTGTVLFLGKVADP 1368
+H A LDV T + V + PFL AV+ KDT +++FLGKV +P
Sbjct: 353 VHGAALDV-DEEGTEGAAATGIGIERTFLRIIVRVNRPFLIAVVLKDTQSIIFLGKVTNP 411
Query: 1369 SPA 1377
S A
Sbjct: 412 SEA 414
>ref|NP_001033293.1| serpin A3-3 [Bos taurus].
Length = 411
Score = 489 bits (1259), Expect = e-138
Identities = 260/423 (61%), Positives = 318/423 (75%)
Frame = +1
Query: 109 MKAEGMSPFLALGLLVAGLCSSVHCVPESKPDPENGTPKDQHSRTPVDPHAIVPSNTDFA 288
M+AE +SP LALGLLVAG+ SVHC+PE N KD+H R VD H + SNTDFA
Sbjct: 1 MRAERLSPLLALGLLVAGI-RSVHCLPE------NVVVKDRHRR--VDGHTLASSNTDFA 51
Query: 289 FSLYKQLVSLDPSKNVIFSPLSVSIALAFLSLGARGPTLTELLEGLKFNLTKTPEAEIHQ 468
FSLYKQL +P+KNV+FSPLSVS+ALAFLSLGARGPTLTE+LEGLKFNLT+ E +IHQ
Sbjct: 52 FSLYKQLALKNPNKNVMFSPLSVSMALAFLSLGARGPTLTEILEGLKFNLTEIQETQIHQ 111
Query: 469 GFQHLLQALSQPSNLLQLNVGNAMFVDEHLKLLDEFRRDAQAKFASDVFSTNFKDPGAAV 648
GFQHLLQAL++P N LQL+VGNAMFV E LKLLD+F DA+ ++S+ F TNF+DP AA
Sbjct: 112 GFQHLLQALNRPRNQLQLSVGNAMFVQEELKLLDKFIEDARVLYSSEAFPTNFRDPEAAK 171
Query: 649 VFINDYVKNKTKGKIPKLFDEHATFSVMVLVNYIYFNAKWKTPFDPEHTIESTFQVSKNR 828
INDYVKNKT+GKI +LF + + + +VLVNY+YF A+WKT FDP+HT ++ F VS N+
Sbjct: 172 SLINDYVKNKTQGKIEELFKDLSPRTELVLVNYVYFKAQWKTRFDPKHTEQAEFHVSDNK 231
Query: 829 TVKVPMMSLRGLETPYFRDEELACTVVELPYTSNDSALFILPDDGRMAAVEAKLLPETLR 1008
TV+VPMM+L LETPYFRDEEL CT+VEL YTSNDSALFILPD G+M +EAKL PE L
Sbjct: 232 TVEVPMMTL-DLETPYFRDEELGCTLVELTYTSNDSALFILPDKGKMQDLEAKLTPEMLT 290
Query: 1009 RWRDSLQPRRIDALYLPRFSVSGDYQLKDTLKQLGIQKVFTHEADLSGVTGDNKLGVSKV 1188
RWR+SLQPRRI LYLP+FS+ +Y+L DTL Q+GI+K+FT +ADLSG+TG L VS+V
Sbjct: 291 RWRNSLQPRRIHELYLPKFSIKSNYELNDTLSQMGIKKIFT-DADLSGITGTADLVVSQV 349
Query: 1189 IHKAVLDVXXXXXXXXXXXXXXXXXSTLYSLTVSFSSPFLFAVIDKDTGTVLFLGKVADP 1368
+H A LDV T + V + PFL AV+ KDT +++FLGKV +P
Sbjct: 350 VHGAALDV-DEEGTEGAAATGIGIERTFLRIIVRVNRPFLIAVVLKDTQSIIFLGKVTNP 408
Query: 1369 SPA 1377
S A
Sbjct: 409 SEA 411
>ref|NP_001139773.1| serpin A3-2 [Bos taurus].
Length = 411
Score = 482 bits (1241), Expect = e-136
Identities = 263/423 (62%), Positives = 312/423 (73%)
Frame = +1
Query: 109 MKAEGMSPFLALGLLVAGLCSSVHCVPESKPDPENGTPKDQHSRTPVDPHAIVPSNTDFA 288
M+AE S LALGLLVAG+ SVHC+PE N KDQH R VD H + SNTDFA
Sbjct: 1 MRAERTSFLLALGLLVAGI-RSVHCLPE------NVVVKDQHRR--VDGHTLASSNTDFA 51
Query: 289 FSLYKQLVSLDPSKNVIFSPLSVSIALAFLSLGARGPTLTELLEGLKFNLTKTPEAEIHQ 468
FSLYKQL +P+KNVI SPLSVSIALAFLSLGARG TLTE+LEGLKFNLT+ E EIH
Sbjct: 52 FSLYKQLALKNPNKNVILSPLSVSIALAFLSLGARGSTLTEILEGLKFNLTEIQEKEIHH 111
Query: 469 GFQHLLQALSQPSNLLQLNVGNAMFVDEHLKLLDEFRRDAQAKFASDVFSTNFKDPGAAV 648
FQHLLQAL+QPSN LQL+VGNAMFV E LKLLD+F DAQ ++S+ F TNF+D AA
Sbjct: 112 SFQHLLQALNQPSNQLQLSVGNAMFVQEELKLLDKFIEDAQVLYSSEAFPTNFRDSEAAR 171
Query: 649 VFINDYVKNKTKGKIPKLFDEHATFSVMVLVNYIYFNAKWKTPFDPEHTIESTFQVSKNR 828
INDYVKNKT+GKI +LF + + +VLVNYIYF A+WKTPFDP+HT ++ F VS N+
Sbjct: 172 SLINDYVKNKTQGKIEELFKYLSPRTELVLVNYIYFKAQWKTPFDPKHTEQAEFHVSDNK 231
Query: 829 TVKVPMMSLRGLETPYFRDEELACTVVELPYTSNDSALFILPDDGRMAAVEAKLLPETLR 1008
TV+VPMM+L LETPYFRDEEL CT+VEL YTSNDSALFILPD+G+M +EAKL PETL
Sbjct: 232 TVEVPMMTL-DLETPYFRDEELGCTLVELTYTSNDSALFILPDEGKMRDLEAKLTPETLT 290
Query: 1009 RWRDSLQPRRIDALYLPRFSVSGDYQLKDTLKQLGIQKVFTHEADLSGVTGDNKLGVSKV 1188
RWR+SLQPRRI LYLP+FS+ +Y+L D L QLGI+K+F + ADLSG+TG L VS+V
Sbjct: 291 RWRNSLQPRRIHELYLPKFSIKSNYELNDILSQLGIRKIFAN-ADLSGITGTADLVVSQV 349
Query: 1189 IHKAVLDVXXXXXXXXXXXXXXXXXSTLYSLTVSFSSPFLFAVIDKDTGTVLFLGKVADP 1368
+H A LDV T + V + PFL AV+ KDT +++FLGKV +P
Sbjct: 350 VHGAALDV-DEEGTEGVAATGIGIERTFLRIIVRVNRPFLIAVVLKDTQSIIFLGKVTNP 408
Query: 1369 SPA 1377
S A
Sbjct: 409 SEA 411
>ref|NP_777193.2| serpin A3-1 precursor [Bos taurus].
Length = 411
Score = 482 bits (1240), Expect = e-136
Identities = 262/423 (61%), Positives = 313/423 (73%)
Frame = +1
Query: 109 MKAEGMSPFLALGLLVAGLCSSVHCVPESKPDPENGTPKDQHSRTPVDPHAIVPSNTDFA 288
M+AE S LALGLLVAG+ SVHC+PE N KDQH R VD H + SNTDFA
Sbjct: 1 MRAERTSFLLALGLLVAGI-PSVHCLPE------NVVVKDQHRR--VDGHTLASSNTDFA 51
Query: 289 FSLYKQLVSLDPSKNVIFSPLSVSIALAFLSLGARGPTLTELLEGLKFNLTKTPEAEIHQ 468
FSLYKQL +P+KNVI SPLSVSIALAFLSLGARG TLTE+LEGLKFNLT+ E EIH
Sbjct: 52 FSLYKQLPLKNPNKNVILSPLSVSIALAFLSLGARGSTLTEILEGLKFNLTEIQEKEIHH 111
Query: 469 GFQHLLQALSQPSNLLQLNVGNAMFVDEHLKLLDEFRRDAQAKFASDVFSTNFKDPGAAV 648
FQHLLQAL+QPSN LQL+VGNAMFV E LKLLD+F DAQ ++S+ F TNF+D AA
Sbjct: 112 SFQHLLQALNQPSNQLQLSVGNAMFVQEELKLLDKFIEDAQVLYSSEAFPTNFRDSEAAR 171
Query: 649 VFINDYVKNKTKGKIPKLFDEHATFSVMVLVNYIYFNAKWKTPFDPEHTIESTFQVSKNR 828
INDYVKNKT+GKI +LF + + +VLVNYIYF A+WKTPFDP+HT ++ F VS N+
Sbjct: 172 SLINDYVKNKTQGKIEELFKYLSPRTELVLVNYIYFKAQWKTPFDPKHTEQAEFHVSDNK 231
Query: 829 TVKVPMMSLRGLETPYFRDEELACTVVELPYTSNDSALFILPDDGRMAAVEAKLLPETLR 1008
TV+VPMM+L LETPYFRDEEL CT+VEL YTSNDSALFILPD+G+M +EAKL PETL
Sbjct: 232 TVEVPMMTL-DLETPYFRDEELGCTLVELTYTSNDSALFILPDEGKMRDLEAKLTPETLT 290
Query: 1009 RWRDSLQPRRIDALYLPRFSVSGDYQLKDTLKQLGIQKVFTHEADLSGVTGDNKLGVSKV 1188
RWR+SLQPRRI LYLP+FS+ +Y+L D L QLGI+K+F + ADLSG+TG L VS+V
Sbjct: 291 RWRNSLQPRRIHELYLPKFSIKSNYELNDILSQLGIRKIFAN-ADLSGITGTADLVVSQV 349
Query: 1189 IHKAVLDVXXXXXXXXXXXXXXXXXSTLYSLTVSFSSPFLFAVIDKDTGTVLFLGKVADP 1368
+H A LDV T+ + V + PFL A++ KDT +++FLGKV +P
Sbjct: 350 VHGAALDV-DEEGTEGAAATGISMERTILRIIVRVNRPFLIAIVLKDTQSIIFLGKVTNP 408
Query: 1369 SPA 1377
S A
Sbjct: 409 SEA 411
>ref|NP_001075213.1| serpin A3-5 [Bos taurus].
Length = 411
Score = 481 bits (1239), Expect = e-136
Identities = 259/423 (61%), Positives = 317/423 (74%)
Frame = +1
Query: 109 MKAEGMSPFLALGLLVAGLCSSVHCVPESKPDPENGTPKDQHSRTPVDPHAIVPSNTDFA 288
M+AE S LALGLL+AG+ SVHC+PE N KDQ R VD H + SNTDFA
Sbjct: 1 MRAERTSFLLALGLLMAGI-RSVHCLPE------NVVVKDQRRR--VDSHTLASSNTDFA 51
Query: 289 FSLYKQLVSLDPSKNVIFSPLSVSIALAFLSLGARGPTLTELLEGLKFNLTKTPEAEIHQ 468
FSLYKQL +P+KNV+FSPLSVS+ALAFLSLGARGPTLTE+LEGLKFNLT+ E +IHQ
Sbjct: 52 FSLYKQLALKNPNKNVMFSPLSVSMALAFLSLGARGPTLTEILEGLKFNLTEIQETQIHQ 111
Query: 469 GFQHLLQALSQPSNLLQLNVGNAMFVDEHLKLLDEFRRDAQAKFASDVFSTNFKDPGAAV 648
GFQHLLQAL++PSN LQL+VGNAMFV E LKLLD+F DA+ ++S+ F TNF+D AA
Sbjct: 112 GFQHLLQALNRPSNQLQLSVGNAMFVQEELKLLDKFIEDARVLYSSEAFPTNFRDSEAAR 171
Query: 649 VFINDYVKNKTKGKIPKLFDEHATFSVMVLVNYIYFNAKWKTPFDPEHTIESTFQVSKNR 828
INDYVKNKT+GKI +LF + +V+VLVNYIYF A+WKT FDP+HT ++ F VSKN+
Sbjct: 172 SLINDYVKNKTQGKIEELFKYLSPRTVLVLVNYIYFKAQWKTRFDPKHTEQAEFHVSKNK 231
Query: 829 TVKVPMMSLRGLETPYFRDEELACTVVELPYTSNDSALFILPDDGRMAAVEAKLLPETLR 1008
TV+VPMM+L LETPYFRD+EL C +VEL Y+SNDSALFILPD+G+M +EAKL PETL
Sbjct: 232 TVEVPMMTL-DLETPYFRDKELGCMLVELTYSSNDSALFILPDEGKMQDLEAKLTPETLT 290
Query: 1009 RWRDSLQPRRIDALYLPRFSVSGDYQLKDTLKQLGIQKVFTHEADLSGVTGDNKLGVSKV 1188
RWR+SLQPRRI LYLP+FS+ +Y+L DTL Q+GI+K+FT +ADLSG+TG L VS+V
Sbjct: 291 RWRNSLQPRRIHELYLPKFSIKSNYELNDTLSQMGIKKIFT-DADLSGITGTADLVVSQV 349
Query: 1189 IHKAVLDVXXXXXXXXXXXXXXXXXSTLYSLTVSFSSPFLFAVIDKDTGTVLFLGKVADP 1368
+H A LDV T + V + PFL AV+ KDT +++FLGKV +P
Sbjct: 350 VHGAALDV-DEEGTEGAAATGIGIERTFLRIIVRVNRPFLIAVVLKDTQSIIFLGKVTNP 408
Query: 1369 SPA 1377
S A
Sbjct: 409 SEA 411
>ref|XP_001787316.2| PREDICTED: endopin 2C-like [Bos taurus].
Length = 411
Score = 466 bits (1200), Expect = e-131
Identities = 249/424 (58%), Positives = 312/424 (73%), Gaps = 1/424 (0%)
Frame = +1
Query: 109 MKAEGMSPFLALGLLVAGLCSSVHCVPESKPDPENGTPKDQHSRTPVDPHAIVPSNTDFA 288
M+ E MSP LALGLLV+GLCS VHC+PE N TP++QH T VD H++ SNTDFA
Sbjct: 1 MRTERMSPLLALGLLVSGLCSRVHCLPE------NVTPEEQHKVTSVDGHSLASSNTDFA 54
Query: 289 FSLYKQLVSLDPSKNVIFSPLSVSIALAFLSLGARGPTLTELLEGLKFNLTKTPEAEIHQ 468
FSLYKQL DP+KNVIFSPLS+SIALAFLSLGA GPT+TE+LEGLKFNLT+TPE EIHQ
Sbjct: 55 FSLYKQLALKDPNKNVIFSPLSISIALAFLSLGAHGPTVTEILEGLKFNLTETPETEIHQ 114
Query: 469 GFQHLLQALSQPSNLLQLNVGNAMFVDEHLKLLDEFRRDAQAKFASDVFSTNFKDPGAAV 648
GFQHLLQ +QPSN LQL+VGNA+FV E LKLLD+FR+DA+A +AS+V S NFKD AAV
Sbjct: 115 GFQHLLQTFNQPSNQLQLSVGNAIFVPEELKLLDKFRKDAEAFYASEVLSINFKDSEAAV 174
Query: 649 VFINDYVKNKTKGKIPKLFDEHATFSVMVLVNYIYFNAKWKTPFDPEHTIESTFQVSKNR 828
IN+YVKNKT GKI KL ++ + ++L+NYI+F A+WKTPF+P HT ES F VSKN
Sbjct: 175 KLINEYVKNKTHGKIEKLLNDLDVLTNLILLNYIFFKAQWKTPFNPNHTYESEFHVSKNE 234
Query: 829 TVKVPMMSLRGLETPYFRDEELACTVVELPYTSNDSALFILPDDGRMAAVEAKLLPETLR 1008
VKVPMM+LR LETPYFRDEEL CT+VEL YTSNDSALFILPD+G+M +EAKL PETL
Sbjct: 235 RVKVPMMTLR-LETPYFRDEELGCTLVELTYTSNDSALFILPDEGKMQDLEAKLTPETLT 293
Query: 1009 RWRDSLQPRRIDALYLPRFSVSGDYQLKDTLKQLGIQKVFTHEADLSGVTGDNKLGVSKV 1188
RWR+SLQPR+I+ + +V+ Q+ + ++ + T +S +G+ + + +V
Sbjct: 294 RWRNSLQPRQIEQV---DSTVTDQEQVDERRSSEALRPLLTPCLPIS--SGNVPVSL-QV 347
Query: 1189 IHKAVLDVXXXXXXXXXXXXXXXXXS-TLYSLTVSFSSPFLFAVIDKDTGTVLFLGKVAD 1365
IHKAVLDV S L++L +SF+ PFL ++ K+T +++FLGKV +
Sbjct: 348 IHKAVLDVGEEGTEGAAVTAVIMFTSLPLHALNISFNRPFLLSIFCKETQSIIFLGKVTN 407
Query: 1366 PSPA 1377
P A
Sbjct: 408 PKEA 411
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 62,440,984
Number of extensions: 1934822
Number of successful extensions: 11442
Number of sequences better than 1.0e-05: 91
Number of HSP's gapped: 11039
Number of HSP's successfully gapped: 92
Length of query: 501
Length of database: 17,681,374
Length adjustment: 106
Effective length of query: 395
Effective length of database: 14,174,046
Effective search space: 5598748170
Effective search space used: 5598748170
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-000820
(1503 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_537546.2| PREDICTED: similar to Alpha-1-antichymotrypsin ... 486 e-137
Alignment gi|XP_855206.1| PREDICTED: similar to serine (or cysteine) prot... 298 9e-81
Alignment gi|XP_547962.2| PREDICTED: similar to serine (or cysteine) prot... 294 2e-79
Alignment gi|NP_001073578.1| serpin peptidase inhibitor, clade A (alpha-1... 293 2e-79
Alignment gi|XP_537544.2| PREDICTED: similar to serine (or cysteine) prot... 288 1e-77
Alignment gi|XP_547960.2| PREDICTED: similar to Corticosteroid-binding gl... 286 5e-77
Alignment gi|XP_538128.1| PREDICTED: similar to Thyroxine-binding globuli... 280 2e-75
Alignment gi|XP_855210.1| PREDICTED: similar to serine (or cysteine) prot... 276 5e-74
Alignment gi|XP_537545.1| PREDICTED: similar to serine (or cysteine) prot... 266 3e-71
Alignment gi|XP_855208.1| PREDICTED: similar to Corticosteroid-binding gl... 188 1e-47
>ref|XP_537546.2| PREDICTED: similar to Alpha-1-antichymotrypsin precursor (ACT) [Canis
familiaris].
Length = 421
Score = 486 bits (1251), Expect = e-137
Identities = 253/424 (59%), Positives = 309/424 (72%), Gaps = 6/424 (1%)
Frame = +1
Query: 124 MSPFLALGLLVAGLCSSVHCVPESKPDPENGTPKDQHSRTPVDPHAIVPSNTDFAFSLYK 303
MSP LALGLLVAGLC +VHC+PE DPEN T +D + T + + SNTDF SLYK
Sbjct: 1 MSPLLALGLLVAGLCPTVHCLPEGMRDPENVTQEDLPNETSENSLRLASSNTDFTLSLYK 60
Query: 304 QLVSLDPSKNVIFSPLSVSIALAFLSLGARGPTLTELLEGLKFNLTKTPEAEIHQGFQHL 483
+L S P KNVIFSP+S+SIALAFLSLGA+G T TE+LEGLKFNLT+ P+ EIH+GFQHL
Sbjct: 61 ELASKSPDKNVIFSPMSISIALAFLSLGAQGTTQTEILEGLKFNLTEIPDREIHRGFQHL 120
Query: 484 LQALSQPSNLLQLNVGNAMFVDEHLKLLDEFRRDAQAKFASDVFSTNFKDPGAAVVFIND 663
L+AL QPS+ LQL+VGNAMFV E LKLL+ F DA+A +AS+ FSTNF++ AA IND
Sbjct: 121 LRALHQPSSELQLSVGNAMFVGEQLKLLETFVEDARALYASEAFSTNFQNSAAAEKLIND 180
Query: 664 YVKNKTKGKIPKLFDEHATFSVMVLVNYIYFNAKWKTPFDPEHTIESTFQVSKNRTVKVP 843
YVKN+T+GKI L + + +VLVNYI+ AKWKTPFDP T +S FQVSK+R+VKVP
Sbjct: 181 YVKNRTQGKIVDLVKDLDLHTAVVLVNYIFLKAKWKTPFDPRDTFKSKFQVSKSRSVKVP 240
Query: 844 MMSLRGLETPYFRDEELACTVVELPYTSNDSALFILPDDGRMAAVEAKLLPETLRRWRDS 1023
MM+L + PYFRD+ L+CTVVEL YTSNDSALF+LPD+GRM AVEA LLPETLRRW S
Sbjct: 241 MMNLEDVWVPYFRDDALSCTVVELQYTSNDSALFVLPDEGRMEAVEAMLLPETLRRWTHS 300
Query: 1024 LQPRRIDALYLPRFSVSGDYQLKDTLKQLGIQKVFTHEADLSGVTGDNKLGVSKVIHKAV 1203
LQ RRID LYLP+FS+S Y L+D L QLG+++VFT+EADLS VTG L VS+++HK +
Sbjct: 301 LQMRRIDNLYLPKFSISSSYNLEDVLPQLGVREVFTNEADLSRVTGHKNLAVSQIVHKTL 360
Query: 1204 LDVXXXXXXXXXXXXXXXXXSTLYS------LTVSFSSPFLFAVIDKDTGTVLFLGKVAD 1365
LDV +S +TV F+ PFLF + KDT +LF GKV +
Sbjct: 361 LDVTELGTEAAAATGSKV---VFFSGKIGPLVTVRFNRPFLFCIHHKDTENILFWGKVTN 417
Query: 1366 PSPA 1377
P+ A
Sbjct: 418 PNQA 421
>ref|XP_855206.1| PREDICTED: similar to serine (or cysteine) proteinase inhibitor,
clade A (alpha-1 antiproteinase, antitrypsin), member 11
[Canis familiaris].
Length = 422
Score = 298 bits (763), Expect = 9e-81
Identities = 172/418 (41%), Positives = 248/418 (59%), Gaps = 8/418 (1%)
Frame = +1
Query: 142 LGLLVAGLCSSVHCVPESKPDPEN----GTPKDQHSRTPVDPHAIVPSNTDFAFSLYKQL 309
L LL AG+ SVHC P S ++ P+D S H I P+ T+FA LYKQL
Sbjct: 6 LWLLGAGILPSVHCQPFSAHGDKSLGVPHAPRDHLSSPDPAYHKITPTITNFALHLYKQL 65
Query: 310 VSLDPSKNVIFSPLSVSIALAFLSLGARGPTLTELLEGLKFNLTKTPEAEIHQGFQHLLQ 489
+ + S N+ FSP+S+S +LA LSLGA+ T T++LEGL FNLT+TPEA+IH+GFQ L+
Sbjct: 66 AA-ETSGNIFFSPVSISTSLALLSLGAQVNTSTQILEGLGFNLTETPEADIHRGFQSLIH 124
Query: 490 ALSQPSNLLQLNVGNAMFVDEHLKLLDEFRRDAQAKFASDVFSTNFKDPGAAVVFINDYV 669
L PS+ L+L VGN++F+D+ LK F + + + FS NF D IN+YV
Sbjct: 125 TLDLPSSKLELKVGNSLFLDKQLKPQQHFLDTIRELYGAFAFSANFTDSATTRRQINEYV 184
Query: 670 KNKTKGKIPKLFDEHATFSVMVLVNYIYFNAKWKTPFDPEHT-IESTFQVSKNRTVKVPM 846
+ +T G++ E ++MVL+NYI+F AKWK PF T + +F V++ ++ +PM
Sbjct: 185 RKQTYGQVADGLQEFTQDTLMVLLNYIFFKAKWKHPFSRYQTQKQESFSVNERTSLHIPM 244
Query: 847 MSLRGLETPYFRDEELACTVVELPYTSNDSALFILPDDGRMAAVEAKLLPETLRRWRDSL 1026
M + + + D+E+ACTV+++ Y+ N AL ILPD G+M VEA L PETLR+W L
Sbjct: 245 MHQKEMHR-FLYDQEMACTVLQIEYSGNAMALLILPDPGKMEQVEAALQPETLRKWDQWL 303
Query: 1027 QPRRIDALYLPRFSVSGDYQLKDTLKQLGIQKVFTHEADLSGVTGDNKLGVSKVIHKAVL 1206
P +D L+LPRFS+SG Y L++ L +G+ +F EADLSG+T +S+V HKA +
Sbjct: 304 LPSLLD-LHLPRFSISGTYNLEEILPLIGLTNIFNLEADLSGITEQLNKTISRVSHKATV 362
Query: 1207 DVXXXXXXXXXXXXXXXXXSTLYSLTVS---FSSPFLFAVIDKDTGTVLFLGKVADPS 1371
D+ L + S F+ PFL + + T ++LFLGKV +P+
Sbjct: 363 DMNVWGTRAGAASSLLSQPQALNATLASQARFNRPFLVLLWEMTTQSLLFLGKVVNPA 420
>ref|XP_547962.2| PREDICTED: similar to serine (or cysteine) proteinase inhibitor,
clade A (alpha-1 antiproteinase, antitrypsin), member 4
[Canis familiaris].
Length = 417
Score = 294 bits (752), Expect = 2e-79
Identities = 155/372 (41%), Positives = 219/372 (58%), Gaps = 2/372 (0%)
Frame = +1
Query: 262 IVPSNTDFAFSLYKQLVSLDPSKNVIFSPLSVSIALAFLSLGARGPTLTELLEGLKFNLT 441
I P NT FA Y + S P N+ FSPLS+S + A LSLGAR + T++LEGL FNLT
Sbjct: 45 IAPGNTAFALHFYHLMASQSPGSNIFFSPLSISASYAMLSLGARSHSKTQILEGLGFNLT 104
Query: 442 KTPEAEIHQGFQHLLQALSQPSNLLQLNVGNAMFVDEHLKLLDEFRRDAQAKFASDVFST 621
+ E++IH+GFQHLL L P + L++++G+ +F+ + L +L EF D+ A + S +F T
Sbjct: 105 EVSESDIHRGFQHLLHTLHLPDDRLEMHMGSTLFLSQDLLILPEFLNDSVAFYDSKLFLT 164
Query: 622 NFKDPGAAVVFINDYVKNKTKGKIPKLFDEHATFSVMVLVNYIYFNAKWKTPFDPEHTIE 801
NF DP IND++K +T+GKI L + T MVLVNYIYF A W+ PF P T
Sbjct: 165 NFHDPVGTTQLINDHIKEETQGKIVDLVSKLNTDIAMVLVNYIYFKALWEKPFQPSMTTT 224
Query: 802 STFQVSKNRTVKVPMMSLRGLETPYFRDEELACTVVELPYTSNDSALFILPDDGRMAAVE 981
F V +N V+VPMM Y D L C+V+ + Y N +A FILP+ G+M VE
Sbjct: 225 QDFHVDENTVVQVPMMLQDTAHHWYLNDRYLPCSVLRMDYKGNMTAFFILPNRGKMKQVE 284
Query: 982 AKLLPETLRRWRDSLQPRRIDALYLPRFSVSGDYQLKDTLKQLGIQKVFTHEADLSGVTG 1161
L PE L RW LQ R+++ L+ P+FS+SG YQL + L ++G +F+ + DLSG+T
Sbjct: 285 EALTPEMLTRWNRLLQKRKLE-LHFPKFSISGSYQLNEILPKMGFVDLFSRQVDLSGITK 343
Query: 1162 DNKLGVSKVIHKAVLDVXXXXXXXXXXXXXXXXXSTLY--SLTVSFSSPFLFAVIDKDTG 1335
+ KL VSK HKA+L+V + + + F+ PF + +T
Sbjct: 344 EKKLQVSKSFHKAILEVDEVGTQAAAATGIFTTFLSAWHNHRVLWFNRPFFVVIFSTNTQ 403
Query: 1336 TVLFLGKVADPS 1371
++LFLGKV +P+
Sbjct: 404 SILFLGKVVNPT 415
>ref|NP_001073578.1| serpin peptidase inhibitor, clade A (alpha-1 antiproteinase,
antitrypsin), member 1 [Canis lupus familiaris].
Length = 415
Score = 293 bits (751), Expect = 2e-79
Identities = 166/410 (40%), Positives = 242/410 (59%), Gaps = 2/410 (0%)
Frame = +1
Query: 148 LLVAGLCSSVHCVPESKPDPENGTPKDQHSRTPVDP--HAIVPSNTDFAFSLYKQLVSLD 321
LL+AGLC VP S + G + P H I P+ DFAFSLY+Q+
Sbjct: 10 LLLAGLCC---LVPRSLAEGLQGDAVQETDDPEHQPACHKIAPNLADFAFSLYRQVAQES 66
Query: 322 PSKNVIFSPLSVSIALAFLSLGARGPTLTELLEGLKFNLTKTPEAEIHQGFQHLLQALSQ 501
+ N+ FSP+S++ A A LSLG +G T T++++GL FNLT+ E E+HQGF LL L+Q
Sbjct: 67 NTTNIFFSPVSIATAFAMLSLGTKGDTHTQIMQGLGFNLTERAEREVHQGFHQLLSILNQ 126
Query: 502 PSNLLQLNVGNAMFVDEHLKLLDEFRRDAQAKFASDVFSTNFKDPGAAVVFINDYVKNKT 681
P N LQL G+ +F+++ +KLL++F D + + S+ F+ NF+ A IN+YV+ T
Sbjct: 127 PDNQLQLTTGSGLFINDTIKLLNKFLEDVRNLYHSEAFTINFRHTEEAKKQINNYVEKGT 186
Query: 682 KGKIPKLFDEHATFSVMVLVNYIYFNAKWKTPFDPEHTIESTFQVSKNRTVKVPMMSLRG 861
+GKI L + +V LVNYI+F KW+ PF+ EHT E F V ++ TVKVPMMS G
Sbjct: 187 QGKIVDLVKDLDEDTVFALVNYIFFKGKWEKPFEVEHTTEEDFHVDEHTTVKVPMMSRLG 246
Query: 862 LETPYFRDEELACTVVELPYTSNDSALFILPDDGRMAAVEAKLLPETLRRWRDSLQPRRI 1041
+ L+ V+ + Y N +A FILPD+G+M +E+KL E L ++ + R
Sbjct: 247 M-FDIQHCATLSSWVLLMEYVGNATAFFILPDEGKMQHLESKLTKEVLAKFLEKRYARSA 305
Query: 1042 DALYLPRFSVSGDYQLKDTLKQLGIQKVFTHEADLSGVTGDNKLGVSKVIHKAVLDVXXX 1221
+L LP+ S+SG Y LK L ++GI KVF+ EADLSG+T + L +SK +HKAVL +
Sbjct: 306 -SLRLPKLSISGTYDLKSVLSKMGITKVFSAEADLSGITEEGPLMLSKGLHKAVLTIDEK 364
Query: 1222 XXXXXXXXXXXXXXSTLYSLTVSFSSPFLFAVIDKDTGTVLFLGKVADPS 1371
++ +V F+ PFL ++D+DT + LF+GKV +P+
Sbjct: 365 GTEAAGATFLEAIPMSM-PPSVDFNKPFLIIIVDRDTKSPLFMGKVVNPT 413
>ref|XP_537544.2| PREDICTED: similar to serine (or cysteine) proteinase inhibitor,
clade A (alpha-1 antiproteinase, antitrypsin), member 9
[Canis familiaris].
Length = 418
Score = 288 bits (737), Expect = 1e-77
Identities = 167/411 (40%), Positives = 237/411 (57%), Gaps = 4/411 (0%)
Frame = +1
Query: 151 LVAGLCSSVHCVPESKPDPENGTPKDQHSRTPVDPHAIVPSNTDFAFSLYKQLVSLDPSK 330
L+ + + ++CVP + P G+P +R+ + SNTDFAF LY++L+ P +
Sbjct: 10 LIVSISAPIYCVPPPRA-PSKGSPCMSSTRSTAASQ-LSSSNTDFAFRLYQRLILKTPDQ 67
Query: 331 NVIFSPLSVSIALAFLSLGARGPTLTELLEGLKFNLTKTPEAEIHQGFQHLLQALSQPSN 510
NV FSPLSVS LA LSLGAR T T++L+GL FNLT PE+ IHQ FQHLL +L P
Sbjct: 68 NVFFSPLSVSACLAMLSLGARSATKTQILQGLGFNLTHLPESSIHQAFQHLLHSLRVPGK 127
Query: 511 LLQLNVGNAMFVDEHLKLLDEFRRDAQAKFASDVFSTNFKDPGAAVVFINDYVKNKTKGK 690
L L +G+ +F+ + L L F D + + S VFST+F A IN YV+ +TKGK
Sbjct: 128 DLDLRMGSVLFIKKELWLQTNFLDDVKRLYESKVFSTDFSSSSTAREKINSYVEKETKGK 187
Query: 691 IPKLFDEHATFSVMVLVNYIYFNAKWKTPFDPEHTIEST-FQVSKNRTVKVPMMSLRGLE 867
+ L +VMVLVN+I+F KW+ PF+P +T +S+ F V K TVKVPMM + E
Sbjct: 188 VVNLIQSLEPLTVMVLVNHIFFKGKWEKPFNPGYTSKSSPFLVGKRTTVKVPMMH-QVEE 246
Query: 868 TPYFRDEELACTVVELPYTSNDSALFILPDDGRMAAVEAKLLPETLRRWRDSLQPRRIDA 1047
+ D EL C+V+ + Y + +A F+LP G+M +E L TLR+W LQ R I+
Sbjct: 247 FAFGVDAELKCSVLRMDYDEDTAAFFVLPGQGKMRQLEQALSSRTLRKWNHLLQKRWIE- 305
Query: 1048 LYLPRFSVSGDYQLKDTLKQLGIQKVFTHEADLSGVTGDNKLGVSKVIHKAVLDVXXXXX 1227
+++P+FS+S Y L+ L ++GI+ F AD SG+T + L +SK HKAVLDV
Sbjct: 306 VFIPKFSLSASYDLETILPKMGIRDAFDKNADFSGITKRDFLQLSKATHKAVLDVSEEGT 365
Query: 1228 XXXXXXXXXXXXSTL---YSLTVSFSSPFLFAVIDKDTGTVLFLGKVADPS 1371
+ V F+ FL +I++ T +LFLGKV +P+
Sbjct: 366 EAAAATATKLIVRSKDGPSHTVVRFNRSFLLLLINRATDAILFLGKVENPT 416
>ref|XP_547960.2| PREDICTED: similar to Corticosteroid-binding globulin precursor (CBG)
(Transcortin) [Canis familiaris].
Length = 404
Score = 286 bits (731), Expect = 5e-77
Identities = 151/370 (40%), Positives = 228/370 (61%)
Frame = +1
Query: 262 IVPSNTDFAFSLYKQLVSLDPSKNVIFSPLSVSIALAFLSLGARGPTLTELLEGLKFNLT 441
+ P N DFAF+LY+ LV+ P KNV SP+S+S+ALA LSLGA G T +LL+GL FNLT
Sbjct: 38 LAPKNVDFAFNLYRHLVASSPDKNVFISPVSISMALAMLSLGACGYTRVQLLQGLGFNLT 97
Query: 442 KTPEAEIHQGFQHLLQALSQPSNLLQLNVGNAMFVDEHLKLLDEFRRDAQAKFASDVFST 621
K EAEIHQGF+HL L + +L++ +GNA+F+D L+LL+ F D + + + ++T
Sbjct: 98 KMSEAEIHQGFRHLRHLLEKSDTMLEMTMGNALFLDRSLELLEPFSADTKHYYDLEAWAT 157
Query: 622 NFKDPGAAVVFINDYVKNKTKGKIPKLFDEHATFSVMVLVNYIYFNAKWKTPFDPEHTIE 801
+F+D A IN+Y+KNKT+GKI L + + ++++LVNYI+F W+ PFDPE T E
Sbjct: 158 DFQDGTGASRQINEYIKNKTQGKIVDLLSKLDSSAMVILVNYIFFKGTWEHPFDPESTRE 217
Query: 802 STFQVSKNRTVKVPMMSLRGLETPYFRDEELACTVVELPYTSNDSALFILPDDGRMAAVE 981
F V++ V+VP M + + D+ L C +V+L Y N + FILP++G+M V
Sbjct: 218 EDFYVNETTVVRVPTM-FQSSTIKHLNDQVLPCQLVQLEYMGNGTVFFILPEEGKMDTVI 276
Query: 982 AKLLPETLRRWRDSLQPRRIDALYLPRFSVSGDYQLKDTLKQLGIQKVFTHEADLSGVTG 1161
A L +T++RW +S +++ LY+P+ S+SG Y L+ L+ +GI + + AD SG+T
Sbjct: 277 AALSRDTIQRWSESFTRSQVN-LYIPKVSLSGAYDLRAILRDMGIADLLDNGADFSGMTR 335
Query: 1162 DNKLGVSKVIHKAVLDVXXXXXXXXXXXXXXXXXSTLYSLTVSFSSPFLFAVIDKDTGTV 1341
+ + +SKV+HKAVL + + L F+ PF+ + D T +
Sbjct: 336 EAQPKLSKVVHKAVLQLHEKGLEAAGPAGVMPNVKS-EPLAFHFNRPFIVMIFDHFTWSS 394
Query: 1342 LFLGKVADPS 1371
LFLGKV +P+
Sbjct: 395 LFLGKVVNPT 404
>ref|XP_538128.1| PREDICTED: similar to Thyroxine-binding globulin precursor
(T4-binding globulin) [Canis familiaris].
Length = 414
Score = 280 bits (717), Expect = 2e-75
Identities = 168/420 (40%), Positives = 240/420 (57%), Gaps = 5/420 (1%)
Frame = +1
Query: 124 MSPFLALGLLVAGLCSSVHCVPESKPDPENGTPKDQHSRTPVDPHAIVPSNTDFAFSLYK 303
M FL L LLV L + E K N PK+ + + N DFAF+LY+
Sbjct: 1 MPLFLYLALLVLELHCASSIRSEGKVITCNSPPKNATF------YKMSSINADFAFNLYR 54
Query: 304 QLVSLDPSKNVIFSPLSVSIALAFLSLGARGPTLTELLEGLKFNLTKTPEAEIHQGFQHL 483
+ P +N+ FSP+S+S ALA LS GA T ++LE L FNLT TP AEI QGFQHL
Sbjct: 55 RFTVETPDRNIFFSPVSISAALAMLSFGACYSTQIQILESLGFNLTDTPMAEIQQGFQHL 114
Query: 484 LQALSQPSNLLQLNVGNAMFVDEHLKLLDEFRRDAQAKFASDVFSTNFKDPGAAVVFIND 663
+ +L+ P L+L +GN +F+ + LK L +F D ++ +A++VFST+F + AA IN
Sbjct: 115 ICSLNIPKKELELQMGNTLFIGKQLKPLAQFLDDVKSLYATEVFSTDFSNVSAAQQLINS 174
Query: 664 YVKNKTKGKIPKLFDEHATFSVMVLVNYIYFNAKWKTPFDPEHTIES-TFQVSKNRTVKV 840
+V+ +TKG++ L + ++MVLVNYI+F A+W PFDP T E +F V K TVKV
Sbjct: 175 HVEKQTKGEVVGLIQDLKPNTIMVLVNYIHFKAQWANPFDPSKTEEGFSFSVDKTTTVKV 234
Query: 841 PMMSLRGLETPY-FRDEELACTVVELPYTSNDSALFILPDDGRMAAVEAKLLPETLRRWR 1017
PMM +E Y D EL CTV+++ Y+ N ALF+LP +G++ VE + +TL++W
Sbjct: 235 PMM--HQMEQYYHLVDTELNCTVLQMDYSKNALALFVLPKEGQIEWVEGAMSSKTLKKWN 292
Query: 1018 DSLQPRRIDALYLPRFSVSGDYQLKDTLKQLGIQKVFTHEADLSGVTGDNKLGVSKVIHK 1197
LQ ID L++P+FS+S + L T+ ++GIQ F A+ G+ G+N L SK HK
Sbjct: 293 RLLQKGWID-LFVPKFSISATHDLGATILKMGIQDAFADNANFRGLMGNNGLKFSKAAHK 351
Query: 1198 AVLDVXXXXXXXXXXXXXXXXXS---TLYSLTVSFSSPFLFAVIDKDTGTVLFLGKVADP 1368
AVL + TL + F FL +++K T ++LFLGKV +P
Sbjct: 352 AVLHIGEKGTEALLVPEVRFLDQPEITLLHPIIQFDRSFLLLILEKSTRSILFLGKVVNP 411
>ref|XP_855210.1| PREDICTED: similar to serine (or cysteine) proteinase inhibitor,
clade A (alpha-1 antiproteinase, antitrypsin), member 12
[Canis familiaris].
Length = 414
Score = 276 bits (705), Expect = 5e-74
Identities = 163/419 (38%), Positives = 237/419 (56%), Gaps = 3/419 (0%)
Frame = +1
Query: 124 MSPFLALGLLVAGLCSSVHCVPESKPDPENGTPKDQHS--RTPVDPHAIVPSNTDFAFSL 297
M+P L LGLL AGL + + P G PK Q + ++ NTDF L
Sbjct: 1 MNPMLGLGLLFAGLLTVEGLLNSKSPVKYRG-PKSQIQSWKGMKAAEGLIKRNTDFGCKL 59
Query: 298 YKQLVSLDPSKNVIFSPLSVSIALAFLSLGARGPTLTELLEGLKFNLTKTPEAEIHQGFQ 477
Y++L S P KN+ FSPLS+S A + LSLGA+ TL E+ +G FN PE +IH+GF
Sbjct: 60 YRKLASNSPRKNIFFSPLSISAAFSMLSLGAQDSTLDEIKQG--FNFRNMPERDIHEGFH 117
Query: 478 HLLQALSQPSNLLQLNVGNAMFVDEHLKLLDEFRRDAQAKFASDVFSTNFKDPGAAVVFI 657
+L+ ++Q S L+L++ N +F+D+ L+ +F + + +++D TNF++ G I
Sbjct: 118 YLIYRMNQGSQDLELHLRNTLFIDQKLQPEKKFLTNVKNLYSADTVPTNFQNLGDTRKQI 177
Query: 658 NDYVKNKTKGKIPKLFDEHATFSVMVLVNYIYFNAKWKTPFDPEHTIESTFQVSKNRTVK 837
NDYV KT+GKI L +VM+L N I+F A+W+ FDP+ T E F + N+ VK
Sbjct: 178 NDYVSQKTQGKINNLIKNIDPGTVMLLTNCIFFRARWQHEFDPKITKEEDFFLDGNQRVK 237
Query: 838 VPMMSLRGL-ETPYFRDEELACTVVELPYTSNDSALFILPDDGRMAAVEAKLLPETLRRW 1014
VPMM G+ ET Y DE+L+CT++E+PY SA FILPD+G+M VE L +T RW
Sbjct: 238 VPMMFRGGMYETGY--DEQLSCTILEMPYQGTISATFILPDEGKMKTVEEALKADTFDRW 295
Query: 1015 RDSLQPRRIDALYLPRFSVSGDYQLKDTLKQLGIQKVFTHEADLSGVTGDNKLGVSKVIH 1194
+ L RR+ + LPRFS++G+Y LK TL LGI K+F DL+ ++ L V + +H
Sbjct: 296 K-KLITRRVVDVSLPRFSITGNYDLKRTLSYLGITKIFEEHGDLTRISPHRSLKVGEAVH 354
Query: 1195 KAVLDVXXXXXXXXXXXXXXXXXSTLYSLTVSFSSPFLFAVIDKDTGTVLFLGKVADPS 1371
+AVL + L V + PFL + D T++FLGK+ +P+
Sbjct: 355 EAVLKMDEKGTEGAAGSGAQTLPMQT-PLPVKLNKPFLVFIKDDVVSTIIFLGKIVNPT 412
>ref|XP_537545.1| PREDICTED: similar to serine (or cysteine) proteinase inhibitor,
clade A (alpha-1 antiproteinase, antitrypsin), member 5
[Canis familiaris].
Length = 407
Score = 266 bits (681), Expect = 3e-71
Identities = 147/387 (37%), Positives = 222/387 (57%), Gaps = 4/387 (1%)
Frame = +1
Query: 220 PKDQHSRTPVDPHA--IVPSNTDFAFSLYKQLVSLDPSKNVIFSPLSVSIALAFLSLGAR 393
P++ R P A + P++ DFAF LY+ L + P +N+ FSPLS+S LA LSLGA
Sbjct: 24 PRETKKRVKEPPVASTVAPASRDFAFDLYRALATAAPDQNIFFSPLSISTTLAMLSLGAG 83
Query: 394 GPTLTELLEGLKFNLTKTPEAEIHQGFQHLLQALSQPSNLLQLNVGNAMFVDEHLKLLDE 573
T ++LEGL + + E +H+ LL +QP +QL++GNA+F+ ++L D
Sbjct: 84 SSTKVQILEGLGLHPQEGLEEALHRRIHQLLWDFAQPREDIQLSLGNALFISPTVRLQDT 143
Query: 574 FRRDAQAKFASDVFSTNFKDPGAAVVFINDYVKNKTKGKIPKLFDEHATFSVMVLVNYIY 753
F + + + +D F TNF DP A INDYV +TKGKI L + + MV+VNYI+
Sbjct: 144 FLQAVKMLYLADTFPTNFGDPAGAQKQINDYVAKQTKGKIVDLAKDLDSTEAMVMVNYIF 203
Query: 754 FNAKWKTPFDPEHTIESTFQVSKNRTVKVPMMSLRGLETPYFRDEELACTVVELPYTSND 933
F AKW+T F+ + T + F V+ V+VPMM Y+ D L+C VV +PY N
Sbjct: 204 FKAKWETGFNHKSTRKQDFHVTSEMVVQVPMMKQED-HYYYYVDRNLSCRVVGVPYRGNA 262
Query: 934 SALFILPDDGRMAAVEAKLLPETLRRWRDSLQPRRIDALYLPRFSVSGDYQLKDTLKQLG 1113
+ALF+LP +G+M +E + +TL++W R+++ LYLP+FS+ G YQL L LG
Sbjct: 263 TALFVLPGEGQMGQLENGMSEKTLKKWLKMFTKRQLE-LYLPKFSIEGSYQLDKVLPTLG 321
Query: 1114 IQKVFTHEADLSGVTGDNKLGVSKVIHKAVLDVXXXXXXXXXXXXXXXXXST--LYSLTV 1287
I+ VFT ADL+G+T D + VS+++HKA+++V + + +
Sbjct: 322 IKDVFTSHADLTGMTNDTNIQVSEMVHKAMVEVDESGTQAAAATEAIFMFKSAPMRPHKI 381
Query: 1288 SFSSPFLFAVIDKDTGTVLFLGKVADP 1368
F+ PF+ +++ T +LFLGKV P
Sbjct: 382 MFNRPFMMLIVENAT-NILFLGKVTHP 407
>ref|XP_855208.1| PREDICTED: similar to Corticosteroid-binding globulin precursor (CBG)
(Transcortin) [Canis familiaris].
Length = 471
Score = 188 bits (477), Expect = 1e-47
Identities = 134/441 (30%), Positives = 207/441 (46%), Gaps = 12/441 (2%)
Frame = +1
Query: 82 QRIPLCEAGMKAEGMSPFLALGLLVAGLCSSVHCVPESKPDPENGTPKDQHSRTPVDPHA 261
+ P A M M L+L L++ GL +S+ C + + + P +PV H
Sbjct: 40 EETPWIAAEMSHRKMHLALSLALILCGLFNSIFCQVKQR-SKWSIYPVSSWEVSPVH-HK 97
Query: 262 IVPSNTDFAFSLYKQLVSLDPSKNVIFSPLSVSIALAFLSLGARGPTLTELLEGLKFNLT 441
I N FA L+K L+ P KN+IFSPLS+S + A LSLG R TLT LLEGL F+L
Sbjct: 98 IEAGNKAFAHKLFKTLLMEHPRKNIIFSPLSISASFAMLSLGTRSTTLTNLLEGLGFDLK 157
Query: 442 KTPEAEIHQGFQHLLQALSQPSNLLQLNVGNAMFVDEHLKLLDEFRRDAQAKFASDVFST 621
++H GFQ ++Q L Q + L + +F+D + K+ F D QA +
Sbjct: 158 VIKVWDVHHGFQSVIQMLKQLNRAGHLMHRDMLFIDSNRKINSPFLWDTQAMYDVRARMI 217
Query: 622 NFKDPGAAVVFINDYVKNKTKGKIPKLFDEHATFSVMVLVNYIYFNAKWKTPFDPEHTIE 801
+F+D IN +V KT + +L + + LV+Y++F W+ F +
Sbjct: 218 DFRDVVKTKKQINHFVAEKTHKRTKELITSLNPHTFLFLVDYVFFKGTWEMAFHSNLMHK 277
Query: 802 STFQVSKNRTVKVPMMSLRGLETPYFRDEELACTVVELPYTSNDSALFILPDDGR----- 966
F V K+ TV V M+ G + Y R EEL T+V++P+ N S + +LPD G+
Sbjct: 278 EDFFVDKHTTVPVDMIWKTG-QMIYSRSEELFATMVKIPFVGNMSIVLVLPDVGQPDSAV 336
Query: 967 --MAAVEAKLLPETLRRWRDSLQPRRIDALYLPRFSVSGDYQLKDTLKQLGIQKVFTHEA 1140
+ A LL + RW + +P+F +S LK L ++GI VFT A
Sbjct: 337 KEIVVQRATLLQSSNMRWVH---------IIMPKFKISSKIDLKKILPKMGISNVFTTGA 387
Query: 1141 DLSGVTGDNKLGVSKVIHKAVLDVXXXXXXXXXXXXXXXXXSTLYS-----LTVSFSSPF 1305
+ SG+T ++ + + +H+A ++V ++ L V F+ PF
Sbjct: 388 NFSGITKEDFPTIFEAMHEATMEVSKEGKMDTSKDMDSRNTIACHTYTATPLVVKFNRPF 447
Query: 1306 LFAVIDKDTGTVLFLGKVADP 1368
V D T + +GKV +P
Sbjct: 448 FLFVEDWMTQRAILMGKVFNP 468
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 65,112,422
Number of extensions: 1988554
Number of successful extensions: 10846
Number of sequences better than 1.0e-05: 46
Number of HSP's gapped: 10643
Number of HSP's successfully gapped: 55
Length of query: 501
Length of database: 18,874,504
Length adjustment: 107
Effective length of query: 394
Effective length of database: 15,307,552
Effective search space: 6031175488
Effective search space used: 6031175488
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-000820
(1503 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001076.2| alpha-1-antichymotrypsin precursor [Homo sapien... 442 e-124
Alignment gi|NP_000345.2| thyroxine-binding globulin precursor [Homo sapi... 300 2e-81
Alignment gi|NP_783866.2| serpin A9 isoform A [Homo sapiens]. 298 9e-81
Alignment gi|NP_001747.2| corticosteroid-binding globulin precursor [Homo... 293 3e-79
Alignment gi|NP_001002236.1| alpha-1-antitrypsin precursor [Homo sapiens]. 293 4e-79
Alignment gi|NP_001002235.1| alpha-1-antitrypsin precursor [Homo sapiens]. 293 4e-79
Alignment gi|NP_000286.3| alpha-1-antitrypsin precursor [Homo sapiens]. 293 4e-79
Alignment gi|NP_001121179.1| alpha-1-antitrypsin precursor [Homo sapiens]. 293 4e-79
Alignment gi|NP_001121178.1| alpha-1-antitrypsin precursor [Homo sapiens]. 293 4e-79
Alignment gi|NP_001121177.1| alpha-1-antitrypsin precursor [Homo sapiens]. 293 4e-79
>ref|NP_001076.2| alpha-1-antichymotrypsin precursor [Homo sapiens].
Length = 423
Score = 442 bits (1138), Expect = e-124
Identities = 239/423 (56%), Positives = 289/423 (68%), Gaps = 3/423 (0%)
Frame = +1
Query: 118 EGMSPFLALGLLVAGLCSSVHCVPESKPDPENGTPKDQHSRTPVDPHAIVPSNTDFAFSL 297
E M P LALGLL AG C +V C P S D EN T ++Q T VD + +N DFAFSL
Sbjct: 2 ERMLPLLALGLLAAGFCPAVLCHPNSPLDEENLTQENQDRGTHVDL-GLASANVDFAFSL 60
Query: 298 YKQLVSLDPSKNVIFSPLSVSIALAFLSLGARGPTLTELLEGLKFNLTKTPEAEIHQGFQ 477
YKQLV P KNVIFSPLS+S ALAFLSLGA TLTE+L+GLKFNLT+T EAEIHQ FQ
Sbjct: 61 YKQLVLKAPDKNVIFSPLSISTALAFLSLGAHNTTLTEILKGLKFNLTETSEAEIHQSFQ 120
Query: 478 HLLQALSQPSNLLQLNVGNAMFVDEHLKLLDEFRRDAQAKFASDVFSTNFKDPGAAVVFI 657
HLL+ L+Q S+ LQL++GNAMFV E L LLD F DA+ + S+ F+T+F+D AA I
Sbjct: 121 HLLRTLNQSSDELQLSMGNAMFVKEQLSLLDRFTEDAKRLYGSEAFATDFQDSAAAKKLI 180
Query: 658 NDYVKNKTKGKIPKLFDEHATFSVMVLVNYIYFNAKWKTPFDPEHTIESTFQVSKNRTVK 837
NDYVKN T+GKI L + + ++MVLVNYI+F AKW+ PFDP+ T +S F +SK + V
Sbjct: 181 NDYVKNGTRGKITDLIKDLDSQTMMVLVNYIFFKAKWEMPFDPQDTHQSRFYLSKKKWVM 240
Query: 838 VPMMSLRGLETPYFRDEELACTVVELPYTSNDSALFILPDDGRMAAVEAKLLPETLRRWR 1017
VPMMSL L PYFRDEEL+CTVVEL YT N SALFILPD +M VEA LLPETL+RWR
Sbjct: 241 VPMMSLHHLTIPYFRDEELSCTVVELKYTGNASALFILPDQDKMEEVEAMLLPETLKRWR 300
Query: 1018 DSLQPRRIDALYLPRFSVSGDYQLKDTLKQLGIQKVFTHEADLSGVTGDNKLGVSKVIHK 1197
DSL+ R I LYLP+FS+S DY L D L QLGI++ FT +ADLSG+TG L VS+V+HK
Sbjct: 301 DSLEFREIGELYLPKFSISRDYNLNDILLQLGIEEAFTSKADLSGITGARNLAVSQVVHK 360
Query: 1198 AVLDVXXXXXXXXXXXXXXXXXSTLYSLT---VSFSSPFLFAVIDKDTGTVLFLGKVADP 1368
AVLDV + T V F+ PFL ++ DT + F+ KV +P
Sbjct: 361 AVLDVFEEGTEASAATAVKITLLSALVETRTIVRFNRPFLMIIVPTDTQNIFFMSKVTNP 420
Query: 1369 SPA 1377
A
Sbjct: 421 KQA 423
>ref|NP_000345.2| thyroxine-binding globulin precursor [Homo sapiens].
Length = 415
Score = 300 bits (768), Expect = 2e-81
Identities = 171/423 (40%), Positives = 249/423 (58%), Gaps = 5/423 (1%)
Frame = +1
Query: 124 MSPFLALGLLVAGLCSSVHCVPESKPDPENGTPKDQHSRTPVDPHAIVPSNTDFAFSLYK 303
MSPFL L LLV GL +++HC PE S+ + + N DFAF+LY+
Sbjct: 1 MSPFLYLVLLVLGLHATIHCA-----SPEGKVTACHSSQPNATLYKMSSINADFAFNLYR 55
Query: 304 QLVSLDPSKNVIFSPLSVSIALAFLSLGARGPTLTELLEGLKFNLTKTPEAEIHQGFQHL 483
+ P KN+ FSP+S+S AL LS GA T TE++E L FNLT TP EI GFQHL
Sbjct: 56 RFTVETPDKNIFFSPVSISAALVMLSFGACCSTQTEIVETLGFNLTDTPMVEIQHGFQHL 115
Query: 484 LQALSQPSNLLQLNVGNAMFVDEHLKLLDEFRRDAQAKFASDVFSTNFKDPGAAVVFIND 663
+ +L+ P L+L +GNA+F+ +HLK L +F D + + ++VFST+F + AA IN
Sbjct: 116 ICSLNFPKKELELQIGNALFIGKHLKPLAKFLNDVKTLYETEVFSTDFSNISAAKQEINS 175
Query: 664 YVKNKTKGKIPKLFDEHATFSVMVLVNYIYFNAKWKTPFDPEHTIE-STFQVSKNRTVKV 840
+V+ +TKGK+ L + ++MVLVNYI+F A+W PFDP T + S+F + K TV+V
Sbjct: 176 HVEMQTKGKVVGLIQDLKPNTIMVLVNYIHFKAQWANPFDPSKTEDSSSFLIDKTTTVQV 235
Query: 841 PMMSLRGLETPY-FRDEELACTVVELPYTSNDSALFILPDDGRMAAVEAKLLPETLRRWR 1017
PMM +E Y D EL CTV+++ Y+ N ALF+LP +G+M +VEA + +TL++W
Sbjct: 236 PMM--HQMEQYYHLVDMELNCTVLQMDYSKNALALFVLPKEGQMESVEAAMSSKTLKKWN 293
Query: 1018 DSLQPRRIDALYLPRFSVSGDYQLKDTLKQLGIQKVFTHEADLSGVTGDNKLGVSKVIHK 1197
LQ +D L++P+FS+S Y L TL ++GIQ ++ AD SG+T DN L +S HK
Sbjct: 294 RLLQKGWVD-LFVPKFSISATYDLGATLLKMGIQHAYSENADFSGLTEDNGLKLSNAAHK 352
Query: 1198 AVLDV---XXXXXXXXXXXXXXXXXSTLYSLTVSFSSPFLFAVIDKDTGTVLFLGKVADP 1368
AVL + +T + F+ ++++ T ++LFLGKV +P
Sbjct: 353 AVLHIGEKGTEAAAVPEVELSDQPENTFLHPIIQIDRSFMLLILERSTRSILFLGKVVNP 412
Query: 1369 SPA 1377
+ A
Sbjct: 413 TEA 415
>ref|NP_783866.2| serpin A9 isoform A [Homo sapiens].
Length = 435
Score = 298 bits (763), Expect = 9e-81
Identities = 174/420 (41%), Positives = 246/420 (58%), Gaps = 4/420 (0%)
Frame = +1
Query: 124 MSPFLALGLLVAGLCSSVHCVPESKPDPENGTPKDQHSRTPVDPHAIVPSNTDFAFSLYK 303
M+ +L L GLC+ ++CV + P S TP + NTDFAF LY+
Sbjct: 19 MASYLYGVLFAVGLCAPIYCVSPANAPSAYPRPSSTKS-TPASQ--VYSLNTDFAFRLYR 75
Query: 304 QLVSLDPSKNVIFSPLSVSIALAFLSLGARGPTLTELLEGLKFNLTKTPEAEIHQGFQHL 483
+LV PS+N+ FSP+SVS +LA LSLGA T T++L+GL FNLT TPE+ IHQGFQHL
Sbjct: 76 RLVLETPSQNIFFSPVSVSTSLAMLSLGAHSVTKTQILQGLGFNLTHTPESAIHQGFQHL 135
Query: 484 LQALSQPSNLLQLNVGNAMFVDEHLKLLDEFRRDAQAKFASDVFSTNFKDPGAAVVFIND 663
+ +L+ PS L L +G+A+FV + L+L F + + + ++VFST+F +P A IN
Sbjct: 136 VHSLTVPSKDLTLKMGSALFVKKELQLQANFLGNVKRLYEAEVFSTDFSNPSIAQARINS 195
Query: 664 YVKNKTKGKIPKLFDEHATFSVMVLVNYIYFNAKWKTPFDPEHTIES-TFQVSKNRTVKV 840
+VK KT+GK+ + + MVLVN+I+F AKW+ PF PE+T ++ F V + TV V
Sbjct: 196 HVKKKTQGKVVDIIQGLDLLTAMVLVNHIFFKAKWEKPFHPEYTRKNFPFLVGEQVTVHV 255
Query: 841 PMMSLRGLETPYFRDEELACTVVELPYTSNDSALFILPDDGRMAAVEAKLLPETLRRWRD 1020
PMM + + + D EL C V+++ Y + A F+LP G+M +E L TLR+W
Sbjct: 256 PMMHQKE-QFAFGVDTELNCFVLQMDYKGDAVAFFVLPSKGKMRQLEQALSARTLRKWSH 314
Query: 1021 SLQPRRIDALYLPRFSVSGDYQLKDTLKQLGIQKVFTHEADLSGVTGDNKLGVSKVIHKA 1200
SLQ R I+ +++PRFS+S Y L+ L ++GIQ VF AD SG+ + L VSK HKA
Sbjct: 315 SLQKRWIE-VFIPRFSISASYNLETILPKMGIQNVFDKNADFSGIAKRDSLQVSKATHKA 373
Query: 1201 VLDVXXXXXXXXXXXXXXXXXSTLYS---LTVSFSSPFLFAVIDKDTGTVLFLGKVADPS 1371
VLDV + TVSF+ FL + +K T +LFLGKV +P+
Sbjct: 374 VLDVSEEGTEATAATTTKFIVRSKDGPSYFTVSFNRTFLMMITNKATDGILFLGKVENPT 433
>ref|NP_001747.2| corticosteroid-binding globulin precursor [Homo sapiens].
Length = 405
Score = 293 bits (750), Expect = 3e-79
Identities = 159/369 (43%), Positives = 223/369 (60%)
Frame = +1
Query: 262 IVPSNTDFAFSLYKQLVSLDPSKNVIFSPLSVSIALAFLSLGARGPTLTELLEGLKFNLT 441
+ +N DFAFSLYK LV+L P KN+ SP+S+S+ALA LSLG G T +LL+GL FNLT
Sbjct: 39 LASANVDFAFSLYKHLVALSPKKNIFISPVSISMALAMLSLGTCGHTRAQLLQGLGFNLT 98
Query: 442 KTPEAEIHQGFQHLLQALSQPSNLLQLNVGNAMFVDEHLKLLDEFRRDAQAKFASDVFST 621
+ E EIHQGFQHL Q ++ L++ +GNA+F+D L+LL+ F D + + S+V +
Sbjct: 99 ERSETEIHQGFQHLHQLFAKSDTSLEMTMGNALFLDGSLELLESFSADIKHYYESEVLAM 158
Query: 622 NFKDPGAAVVFINDYVKNKTKGKIPKLFDEHATFSVMVLVNYIYFNAKWKTPFDPEHTIE 801
NF+D A IN YVKNKT+GKI LF + +++VLVNYI+F W PFD T E
Sbjct: 159 NFQDWATASRQINSYVKNKTQGKIVDLFSGLDSPAILVLVNYIFFKGTWTQPFDLASTRE 218
Query: 802 STFQVSKNRTVKVPMMSLRGLETPYFRDEELACTVVELPYTSNDSALFILPDDGRMAAVE 981
F V + VKVPMM L+ Y D EL C +V++ Y N + FILPD G+M V
Sbjct: 219 ENFYVDETTVVKVPMM-LQSSTISYLHDAELPCQLVQMNYVGNGTVFFILPDKGKMNTVI 277
Query: 982 AKLLPETLRRWRDSLQPRRIDALYLPRFSVSGDYQLKDTLKQLGIQKVFTHEADLSGVTG 1161
A L +T+ RW L ++D LY+P+ ++SG Y L D L+++GI +FT++A+ S +T
Sbjct: 278 AALSRDTINRWSAGLTSSQVD-LYIPKVTISGVYDLGDVLEEMGIADLFTNQANFSRITQ 336
Query: 1162 DNKLGVSKVIHKAVLDVXXXXXXXXXXXXXXXXXSTLYSLTVSFSSPFLFAVIDKDTGTV 1341
D +L SKV+HKAVL + T + + F+ PF+ + D T +
Sbjct: 337 DAQLKSSKVVHKAVLQLNEEGVDTAGSTGVTLNL-TSKPIILRFNQPFIIMIFDHFTWSS 395
Query: 1342 LFLGKVADP 1368
LFL +V +P
Sbjct: 396 LFLARVMNP 404
>ref|NP_001002236.1| alpha-1-antitrypsin precursor [Homo sapiens].
Length = 418
Score = 293 bits (749), Expect = 4e-79
Identities = 166/410 (40%), Positives = 245/410 (59%), Gaps = 2/410 (0%)
Frame = +1
Query: 148 LLVAGLCS--SVHCVPESKPDPENGTPKDQHSRTPVDPHAIVPSNTDFAFSLYKQLVSLD 321
LL+AGLC V + + D T H + + I P+ +FAFSLY+QL
Sbjct: 10 LLLAGLCCLVPVSLAEDPQGDAAQKTDTSHHDQDHPTFNKITPNLAEFAFSLYRQLAHQS 69
Query: 322 PSKNVIFSPLSVSIALAFLSLGARGPTLTELLEGLKFNLTKTPEAEIHQGFQHLLQALSQ 501
S N+ FSP+S++ A A LSLG + T E+LEGL FNLT+ PEA+IH+GFQ LL+ L+Q
Sbjct: 70 NSTNIFFSPVSIATAFAMLSLGTKADTHDEILEGLNFNLTEIPEAQIHEGFQELLRTLNQ 129
Query: 502 PSNLLQLNVGNAMFVDEHLKLLDEFRRDAQAKFASDVFSTNFKDPGAAVVFINDYVKNKT 681
P + LQL GN +F+ E LKL+D+F D + + S+ F+ NF D A INDYV+ T
Sbjct: 130 PDSQLQLTTGNGLFLSEGLKLVDKFLEDVKKLYHSEAFTVNFGDTEEAKKQINDYVEKGT 189
Query: 682 KGKIPKLFDEHATFSVMVLVNYIYFNAKWKTPFDPEHTIESTFQVSKNRTVKVPMMSLRG 861
+GKI L E +V LVNYI+F KW+ PF+ + T E F V + TVKVPMM G
Sbjct: 190 QGKIVDLVKELDRDTVFALVNYIFFKGKWERPFEVKDTEEEDFHVDQVTTVKVPMMKRLG 249
Query: 862 LETPYFRDEELACTVVELPYTSNDSALFILPDDGRMAAVEAKLLPETLRRWRDSLQPRRI 1041
+ ++L+ V+ + Y N +A+F LPD+G++ +E +L + + ++ ++ + RR
Sbjct: 250 MFN-IQHCKKLSSWVLLMKYLGNATAIFFLPDEGKLQHLENELTHDIITKFLEN-EDRRS 307
Query: 1042 DALYLPRFSVSGDYQLKDTLKQLGIQKVFTHEADLSGVTGDNKLGVSKVIHKAVLDVXXX 1221
+L+LP+ S++G Y LK L QLGI KVF++ ADLSGVT + L +SK +HKAVL +
Sbjct: 308 ASLHLPKLSITGTYDLKSVLGQLGITKVFSNGADLSGVTEEAPLKLSKAVHKAVLTIDEK 367
Query: 1222 XXXXXXXXXXXXXXSTLYSLTVSFSSPFLFAVIDKDTGTVLFLGKVADPS 1371
++ V F+ PF+F +I+++T + LF+GKV +P+
Sbjct: 368 GTEAAGAMFLEAIPMSI-PPEVKFNKPFVFLMIEQNTKSPLFMGKVVNPT 416
>ref|NP_001002235.1| alpha-1-antitrypsin precursor [Homo sapiens].
Length = 418
Score = 293 bits (749), Expect = 4e-79
Identities = 166/410 (40%), Positives = 245/410 (59%), Gaps = 2/410 (0%)
Frame = +1
Query: 148 LLVAGLCS--SVHCVPESKPDPENGTPKDQHSRTPVDPHAIVPSNTDFAFSLYKQLVSLD 321
LL+AGLC V + + D T H + + I P+ +FAFSLY+QL
Sbjct: 10 LLLAGLCCLVPVSLAEDPQGDAAQKTDTSHHDQDHPTFNKITPNLAEFAFSLYRQLAHQS 69
Query: 322 PSKNVIFSPLSVSIALAFLSLGARGPTLTELLEGLKFNLTKTPEAEIHQGFQHLLQALSQ 501
S N+ FSP+S++ A A LSLG + T E+LEGL FNLT+ PEA+IH+GFQ LL+ L+Q
Sbjct: 70 NSTNIFFSPVSIATAFAMLSLGTKADTHDEILEGLNFNLTEIPEAQIHEGFQELLRTLNQ 129
Query: 502 PSNLLQLNVGNAMFVDEHLKLLDEFRRDAQAKFASDVFSTNFKDPGAAVVFINDYVKNKT 681
P + LQL GN +F+ E LKL+D+F D + + S+ F+ NF D A INDYV+ T
Sbjct: 130 PDSQLQLTTGNGLFLSEGLKLVDKFLEDVKKLYHSEAFTVNFGDTEEAKKQINDYVEKGT 189
Query: 682 KGKIPKLFDEHATFSVMVLVNYIYFNAKWKTPFDPEHTIESTFQVSKNRTVKVPMMSLRG 861
+GKI L E +V LVNYI+F KW+ PF+ + T E F V + TVKVPMM G
Sbjct: 190 QGKIVDLVKELDRDTVFALVNYIFFKGKWERPFEVKDTEEEDFHVDQVTTVKVPMMKRLG 249
Query: 862 LETPYFRDEELACTVVELPYTSNDSALFILPDDGRMAAVEAKLLPETLRRWRDSLQPRRI 1041
+ ++L+ V+ + Y N +A+F LPD+G++ +E +L + + ++ ++ + RR
Sbjct: 250 MFN-IQHCKKLSSWVLLMKYLGNATAIFFLPDEGKLQHLENELTHDIITKFLEN-EDRRS 307
Query: 1042 DALYLPRFSVSGDYQLKDTLKQLGIQKVFTHEADLSGVTGDNKLGVSKVIHKAVLDVXXX 1221
+L+LP+ S++G Y LK L QLGI KVF++ ADLSGVT + L +SK +HKAVL +
Sbjct: 308 ASLHLPKLSITGTYDLKSVLGQLGITKVFSNGADLSGVTEEAPLKLSKAVHKAVLTIDEK 367
Query: 1222 XXXXXXXXXXXXXXSTLYSLTVSFSSPFLFAVIDKDTGTVLFLGKVADPS 1371
++ V F+ PF+F +I+++T + LF+GKV +P+
Sbjct: 368 GTEAAGAMFLEAIPMSI-PPEVKFNKPFVFLMIEQNTKSPLFMGKVVNPT 416
>ref|NP_000286.3| alpha-1-antitrypsin precursor [Homo sapiens].
Length = 418
Score = 293 bits (749), Expect = 4e-79
Identities = 166/410 (40%), Positives = 245/410 (59%), Gaps = 2/410 (0%)
Frame = +1
Query: 148 LLVAGLCS--SVHCVPESKPDPENGTPKDQHSRTPVDPHAIVPSNTDFAFSLYKQLVSLD 321
LL+AGLC V + + D T H + + I P+ +FAFSLY+QL
Sbjct: 10 LLLAGLCCLVPVSLAEDPQGDAAQKTDTSHHDQDHPTFNKITPNLAEFAFSLYRQLAHQS 69
Query: 322 PSKNVIFSPLSVSIALAFLSLGARGPTLTELLEGLKFNLTKTPEAEIHQGFQHLLQALSQ 501
S N+ FSP+S++ A A LSLG + T E+LEGL FNLT+ PEA+IH+GFQ LL+ L+Q
Sbjct: 70 NSTNIFFSPVSIATAFAMLSLGTKADTHDEILEGLNFNLTEIPEAQIHEGFQELLRTLNQ 129
Query: 502 PSNLLQLNVGNAMFVDEHLKLLDEFRRDAQAKFASDVFSTNFKDPGAAVVFINDYVKNKT 681
P + LQL GN +F+ E LKL+D+F D + + S+ F+ NF D A INDYV+ T
Sbjct: 130 PDSQLQLTTGNGLFLSEGLKLVDKFLEDVKKLYHSEAFTVNFGDTEEAKKQINDYVEKGT 189
Query: 682 KGKIPKLFDEHATFSVMVLVNYIYFNAKWKTPFDPEHTIESTFQVSKNRTVKVPMMSLRG 861
+GKI L E +V LVNYI+F KW+ PF+ + T E F V + TVKVPMM G
Sbjct: 190 QGKIVDLVKELDRDTVFALVNYIFFKGKWERPFEVKDTEEEDFHVDQVTTVKVPMMKRLG 249
Query: 862 LETPYFRDEELACTVVELPYTSNDSALFILPDDGRMAAVEAKLLPETLRRWRDSLQPRRI 1041
+ ++L+ V+ + Y N +A+F LPD+G++ +E +L + + ++ ++ + RR
Sbjct: 250 MFN-IQHCKKLSSWVLLMKYLGNATAIFFLPDEGKLQHLENELTHDIITKFLEN-EDRRS 307
Query: 1042 DALYLPRFSVSGDYQLKDTLKQLGIQKVFTHEADLSGVTGDNKLGVSKVIHKAVLDVXXX 1221
+L+LP+ S++G Y LK L QLGI KVF++ ADLSGVT + L +SK +HKAVL +
Sbjct: 308 ASLHLPKLSITGTYDLKSVLGQLGITKVFSNGADLSGVTEEAPLKLSKAVHKAVLTIDEK 367
Query: 1222 XXXXXXXXXXXXXXSTLYSLTVSFSSPFLFAVIDKDTGTVLFLGKVADPS 1371
++ V F+ PF+F +I+++T + LF+GKV +P+
Sbjct: 368 GTEAAGAMFLEAIPMSI-PPEVKFNKPFVFLMIEQNTKSPLFMGKVVNPT 416
>ref|NP_001121179.1| alpha-1-antitrypsin precursor [Homo sapiens].
Length = 418
Score = 293 bits (749), Expect = 4e-79
Identities = 166/410 (40%), Positives = 245/410 (59%), Gaps = 2/410 (0%)
Frame = +1
Query: 148 LLVAGLCS--SVHCVPESKPDPENGTPKDQHSRTPVDPHAIVPSNTDFAFSLYKQLVSLD 321
LL+AGLC V + + D T H + + I P+ +FAFSLY+QL
Sbjct: 10 LLLAGLCCLVPVSLAEDPQGDAAQKTDTSHHDQDHPTFNKITPNLAEFAFSLYRQLAHQS 69
Query: 322 PSKNVIFSPLSVSIALAFLSLGARGPTLTELLEGLKFNLTKTPEAEIHQGFQHLLQALSQ 501
S N+ FSP+S++ A A LSLG + T E+LEGL FNLT+ PEA+IH+GFQ LL+ L+Q
Sbjct: 70 NSTNIFFSPVSIATAFAMLSLGTKADTHDEILEGLNFNLTEIPEAQIHEGFQELLRTLNQ 129
Query: 502 PSNLLQLNVGNAMFVDEHLKLLDEFRRDAQAKFASDVFSTNFKDPGAAVVFINDYVKNKT 681
P + LQL GN +F+ E LKL+D+F D + + S+ F+ NF D A INDYV+ T
Sbjct: 130 PDSQLQLTTGNGLFLSEGLKLVDKFLEDVKKLYHSEAFTVNFGDTEEAKKQINDYVEKGT 189
Query: 682 KGKIPKLFDEHATFSVMVLVNYIYFNAKWKTPFDPEHTIESTFQVSKNRTVKVPMMSLRG 861
+GKI L E +V LVNYI+F KW+ PF+ + T E F V + TVKVPMM G
Sbjct: 190 QGKIVDLVKELDRDTVFALVNYIFFKGKWERPFEVKDTEEEDFHVDQVTTVKVPMMKRLG 249
Query: 862 LETPYFRDEELACTVVELPYTSNDSALFILPDDGRMAAVEAKLLPETLRRWRDSLQPRRI 1041
+ ++L+ V+ + Y N +A+F LPD+G++ +E +L + + ++ ++ + RR
Sbjct: 250 MFN-IQHCKKLSSWVLLMKYLGNATAIFFLPDEGKLQHLENELTHDIITKFLEN-EDRRS 307
Query: 1042 DALYLPRFSVSGDYQLKDTLKQLGIQKVFTHEADLSGVTGDNKLGVSKVIHKAVLDVXXX 1221
+L+LP+ S++G Y LK L QLGI KVF++ ADLSGVT + L +SK +HKAVL +
Sbjct: 308 ASLHLPKLSITGTYDLKSVLGQLGITKVFSNGADLSGVTEEAPLKLSKAVHKAVLTIDEK 367
Query: 1222 XXXXXXXXXXXXXXSTLYSLTVSFSSPFLFAVIDKDTGTVLFLGKVADPS 1371
++ V F+ PF+F +I+++T + LF+GKV +P+
Sbjct: 368 GTEAAGAMFLEAIPMSI-PPEVKFNKPFVFLMIEQNTKSPLFMGKVVNPT 416
>ref|NP_001121178.1| alpha-1-antitrypsin precursor [Homo sapiens].
Length = 418
Score = 293 bits (749), Expect = 4e-79
Identities = 166/410 (40%), Positives = 245/410 (59%), Gaps = 2/410 (0%)
Frame = +1
Query: 148 LLVAGLCS--SVHCVPESKPDPENGTPKDQHSRTPVDPHAIVPSNTDFAFSLYKQLVSLD 321
LL+AGLC V + + D T H + + I P+ +FAFSLY+QL
Sbjct: 10 LLLAGLCCLVPVSLAEDPQGDAAQKTDTSHHDQDHPTFNKITPNLAEFAFSLYRQLAHQS 69
Query: 322 PSKNVIFSPLSVSIALAFLSLGARGPTLTELLEGLKFNLTKTPEAEIHQGFQHLLQALSQ 501
S N+ FSP+S++ A A LSLG + T E+LEGL FNLT+ PEA+IH+GFQ LL+ L+Q
Sbjct: 70 NSTNIFFSPVSIATAFAMLSLGTKADTHDEILEGLNFNLTEIPEAQIHEGFQELLRTLNQ 129
Query: 502 PSNLLQLNVGNAMFVDEHLKLLDEFRRDAQAKFASDVFSTNFKDPGAAVVFINDYVKNKT 681
P + LQL GN +F+ E LKL+D+F D + + S+ F+ NF D A INDYV+ T
Sbjct: 130 PDSQLQLTTGNGLFLSEGLKLVDKFLEDVKKLYHSEAFTVNFGDTEEAKKQINDYVEKGT 189
Query: 682 KGKIPKLFDEHATFSVMVLVNYIYFNAKWKTPFDPEHTIESTFQVSKNRTVKVPMMSLRG 861
+GKI L E +V LVNYI+F KW+ PF+ + T E F V + TVKVPMM G
Sbjct: 190 QGKIVDLVKELDRDTVFALVNYIFFKGKWERPFEVKDTEEEDFHVDQVTTVKVPMMKRLG 249
Query: 862 LETPYFRDEELACTVVELPYTSNDSALFILPDDGRMAAVEAKLLPETLRRWRDSLQPRRI 1041
+ ++L+ V+ + Y N +A+F LPD+G++ +E +L + + ++ ++ + RR
Sbjct: 250 MFN-IQHCKKLSSWVLLMKYLGNATAIFFLPDEGKLQHLENELTHDIITKFLEN-EDRRS 307
Query: 1042 DALYLPRFSVSGDYQLKDTLKQLGIQKVFTHEADLSGVTGDNKLGVSKVIHKAVLDVXXX 1221
+L+LP+ S++G Y LK L QLGI KVF++ ADLSGVT + L +SK +HKAVL +
Sbjct: 308 ASLHLPKLSITGTYDLKSVLGQLGITKVFSNGADLSGVTEEAPLKLSKAVHKAVLTIDEK 367
Query: 1222 XXXXXXXXXXXXXXSTLYSLTVSFSSPFLFAVIDKDTGTVLFLGKVADPS 1371
++ V F+ PF+F +I+++T + LF+GKV +P+
Sbjct: 368 GTEAAGAMFLEAIPMSI-PPEVKFNKPFVFLMIEQNTKSPLFMGKVVNPT 416
>ref|NP_001121177.1| alpha-1-antitrypsin precursor [Homo sapiens].
Length = 418
Score = 293 bits (749), Expect = 4e-79
Identities = 166/410 (40%), Positives = 245/410 (59%), Gaps = 2/410 (0%)
Frame = +1
Query: 148 LLVAGLCS--SVHCVPESKPDPENGTPKDQHSRTPVDPHAIVPSNTDFAFSLYKQLVSLD 321
LL+AGLC V + + D T H + + I P+ +FAFSLY+QL
Sbjct: 10 LLLAGLCCLVPVSLAEDPQGDAAQKTDTSHHDQDHPTFNKITPNLAEFAFSLYRQLAHQS 69
Query: 322 PSKNVIFSPLSVSIALAFLSLGARGPTLTELLEGLKFNLTKTPEAEIHQGFQHLLQALSQ 501
S N+ FSP+S++ A A LSLG + T E+LEGL FNLT+ PEA+IH+GFQ LL+ L+Q
Sbjct: 70 NSTNIFFSPVSIATAFAMLSLGTKADTHDEILEGLNFNLTEIPEAQIHEGFQELLRTLNQ 129
Query: 502 PSNLLQLNVGNAMFVDEHLKLLDEFRRDAQAKFASDVFSTNFKDPGAAVVFINDYVKNKT 681
P + LQL GN +F+ E LKL+D+F D + + S+ F+ NF D A INDYV+ T
Sbjct: 130 PDSQLQLTTGNGLFLSEGLKLVDKFLEDVKKLYHSEAFTVNFGDTEEAKKQINDYVEKGT 189
Query: 682 KGKIPKLFDEHATFSVMVLVNYIYFNAKWKTPFDPEHTIESTFQVSKNRTVKVPMMSLRG 861
+GKI L E +V LVNYI+F KW+ PF+ + T E F V + TVKVPMM G
Sbjct: 190 QGKIVDLVKELDRDTVFALVNYIFFKGKWERPFEVKDTEEEDFHVDQVTTVKVPMMKRLG 249
Query: 862 LETPYFRDEELACTVVELPYTSNDSALFILPDDGRMAAVEAKLLPETLRRWRDSLQPRRI 1041
+ ++L+ V+ + Y N +A+F LPD+G++ +E +L + + ++ ++ + RR
Sbjct: 250 MFN-IQHCKKLSSWVLLMKYLGNATAIFFLPDEGKLQHLENELTHDIITKFLEN-EDRRS 307
Query: 1042 DALYLPRFSVSGDYQLKDTLKQLGIQKVFTHEADLSGVTGDNKLGVSKVIHKAVLDVXXX 1221
+L+LP+ S++G Y LK L QLGI KVF++ ADLSGVT + L +SK +HKAVL +
Sbjct: 308 ASLHLPKLSITGTYDLKSVLGQLGITKVFSNGADLSGVTEEAPLKLSKAVHKAVLTIDEK 367
Query: 1222 XXXXXXXXXXXXXXSTLYSLTVSFSSPFLFAVIDKDTGTVLFLGKVADPS 1371
++ V F+ PF+F +I+++T + LF+GKV +P+
Sbjct: 368 GTEAAGAMFLEAIPMSI-PPEVKFNKPFVFLMIEQNTKSPLFMGKVVNPT 416
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 63,691,298
Number of extensions: 1936311
Number of successful extensions: 10416
Number of sequences better than 1.0e-05: 61
Number of HSP's gapped: 10158
Number of HSP's successfully gapped: 64
Length of query: 501
Length of database: 18,297,164
Length adjustment: 107
Effective length of query: 394
Effective length of database: 14,770,016
Effective search space: 5819386304
Effective search space used: 5819386304
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-000820
(1503 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_033278.2| serine protease inhibitor A3N precursor [Mus mu... 419 e-117
Alignment gi|NP_033279.2| serine protease inhibitor A3M precursor [Mus mu... 413 e-115
Alignment gi|NP_032484.1| serine protease inhibitor A3C precursor [Mus mu... 409 e-114
Alignment gi|NP_001161766.1| serine protease inhibitor A3F [Mus musculus]. 400 e-111
Alignment gi|NP_001028507.2| serine protease inhibitor A3F [Mus musculus]. 400 e-111
Alignment gi|NP_001161767.1| serine protease inhibitor A3F [Mus musculus]. 400 e-111
Alignment gi|NP_001186869.1| serine (or cysteine) peptidase inhibitor, cl... 391 e-109
Alignment gi|XP_003085882.1| PREDICTED: serine protease inhibitor A3F iso... 388 e-108
Alignment gi|XP_003085883.1| PREDICTED: serine protease inhibitor A3F iso... 388 e-108
Alignment gi|NP_035588.2| serine protease inhibitor A3K precursor [Mus mu... 387 e-107
>ref|NP_033278.2| serine protease inhibitor A3N precursor [Mus musculus].
Length = 418
Score = 419 bits (1078), Expect = e-117
Identities = 213/417 (51%), Positives = 287/417 (68%), Gaps = 2/417 (0%)
Frame = +1
Query: 124 MSPFLALGLLVAGLCSSVHCVPESKPDPENGTPKDQHSRTPVDPHAIVPSNTDFAFSLYK 303
M+ ALGLL+AG+C +V C P+ + +D + T +D + NTDFAFSLYK
Sbjct: 1 MAFIAALGLLMAGICPAVLCFPDGTLGMDAAVQEDHDNGTQLDSLTLASINTDFAFSLYK 60
Query: 304 QLVSLDPSKNVIFSPLSVSIALAFLSLGARGPTLTELLEGLKFNLTKTPEAEIHQGFQHL 483
+LV +P KN++FSPLS+S ALA +SLGA+G TL E+LEGLKFNLT+T EA+IHQGF HL
Sbjct: 61 ELVLKNPDKNIVFSPLSISAALAVMSLGAKGNTLEEILEGLKFNLTETSEADIHQGFGHL 120
Query: 484 LQALSQPSNLLQLNVGNAMFVDEHLKLLDEFRRDAQAKFASDVFSTNFKDPGAAVVFIND 663
LQ L+QP + +Q++ G+A+F+++ ++L EF+ A+A + ++ F+ +F+ P A IND
Sbjct: 121 LQRLNQPKDQVQISTGSALFIEKRQQILTEFQEKARALYQAEAFTADFQQPRQAKKLIND 180
Query: 664 YVKNKTKGKIPKLFDEHATFSVMVLVNYIYFNAKWKTPFDPEHTIESTFQVSKNRTVKVP 843
YV+ +T+G I +L + ++MVLVNYIYF AKWK PFDP T +S F K R V VP
Sbjct: 181 YVRKQTQGMIKELVSDLDKRTLMVLVNYIYFKAKWKVPFDPLDTFKSEFYAGKRRPVIVP 240
Query: 844 MMSLRGLETPYFRDEELACTVVELPYTSNDSALFILPDDGRMAAVEAKLLPETLRRWRDS 1023
MMS+ L TPYFRDEEL CTVVEL YT N SA+FILPD G+M VEA L PETLR+W++S
Sbjct: 241 MMSMEDLTTPYFRDEELFCTVVELKYTGNASAMFILPDQGKMQQVEASLQPETLRKWKNS 300
Query: 1024 LQPRRIDALYLPRFSVSGDYQLKDTLKQLGIQKVFTHEADLSGVTGDNKLGVSKVIHKAV 1203
L+PR ID L+LP+FS+S DY L+D L +LGI++VF+ +ADLS +TG L VS+V+HKAV
Sbjct: 301 LKPRMIDELHLPKFSISTDYSLEDVLSKLGIREVFSTQADLSAITGTKDLRVSQVVHKAV 360
Query: 1204 LDV--XXXXXXXXXXXXXXXXXSTLYSLTVSFSSPFLFAVIDKDTGTVLFLGKVADP 1368
LDV + LY LTV F+ PFL + D +T F+ K+A+P
Sbjct: 361 LDVAETGTEAAAATGVKFVPMSAKLYPLTVYFNRPFLIMIFDTETEIAPFIAKIANP 417
>ref|NP_033279.2| serine protease inhibitor A3M precursor [Mus musculus].
Length = 418
Score = 413 bits (1062), Expect = e-115
Identities = 213/417 (51%), Positives = 283/417 (67%), Gaps = 2/417 (0%)
Frame = +1
Query: 124 MSPFLALGLLVAGLCSSVHCVPESKPDPENGTPKDQHSRTPVDPHAIVPSNTDFAFSLYK 303
M+ ALG+L+AG+C +V C + + K+Q S TP D + NTDFAFSLYK
Sbjct: 1 MAFIAALGILMAGICPTVLCFSDDTWGIDILLHKNQESGTPDDSLTLASINTDFAFSLYK 60
Query: 304 QLVSLDPSKNVIFSPLSVSIALAFLSLGARGPTLTELLEGLKFNLTKTPEAEIHQGFQHL 483
++ +P KN++FSPLS+S ALA +SLGA+G TL E+LEGLKFNLT+T EA+IHQGF HL
Sbjct: 61 KMALKNPDKNIVFSPLSISAALALVSLGAKGNTLEEILEGLKFNLTETSEADIHQGFGHL 120
Query: 484 LQALSQPSNLLQLNVGNAMFVDEHLKLLDEFRRDAQAKFASDVFSTNFKDPGAAVVFIND 663
LQ LSQP + Q+N+GNAMF+++ L++L EF +A + ++ F+ +F+ P A IND
Sbjct: 121 LQRLSQPEDQDQINIGNAMFIEKDLQILAEFHEKTRALYQTEAFTADFQQPTEATKLIND 180
Query: 664 YVKNKTKGKIPKLFDEHATFSVMVLVNYIYFNAKWKTPFDPEHTIESTFQVSKNRTVKVP 843
YV N+T+G I KL E ++MVLVNYIYF KWK FDP+ T ES F + + R+VKVP
Sbjct: 181 YVSNQTQGMIKKLISELDDRTLMVLVNYIYFKGKWKISFDPQDTFESEFYLDEKRSVKVP 240
Query: 844 MMSLRGLETPYFRDEELACTVVELPYTSNDSALFILPDDGRMAAVEAKLLPETLRRWRDS 1023
MM ++ L T +FRDEEL+C+V+EL YT N SALFILPD GRM VEA L PETLR+W S
Sbjct: 241 MMKMKFLTTRHFRDEELSCSVLELKYTGNASALFILPDQGRMQQVEASLQPETLRKWWKS 300
Query: 1024 LQPRRIDALYLPRFSVSGDYQLKDTLKQLGIQKVFTHEADLSGVTGDNKLGVSKVIHKAV 1203
L+ R+I LYLP+FS+S DY LKD L +LGI+++F+ +ADLSG+TG L VS+V+HKAV
Sbjct: 301 LKTRKIGELYLPKFSISTDYNLKDILPELGIKEIFSKQADLSGITGTKDLSVSQVVHKAV 360
Query: 1204 LDVXXXXXXXXXXXXXXXXXST--LYSLTVSFSSPFLFAVIDKDTGTVLFLGKVADP 1368
LDV + L ++TV F+ PFL + T LF+ KV +P
Sbjct: 361 LDVAETGTEAAAATGFIFGFRSRRLQTMTVQFNRPFLMVISHTGVQTTLFMAKVTNP 417
>ref|NP_032484.1| serine protease inhibitor A3C precursor [Mus musculus].
Length = 417
Score = 409 bits (1051), Expect = e-114
Identities = 207/418 (49%), Positives = 284/418 (67%)
Frame = +1
Query: 124 MSPFLALGLLVAGLCSSVHCVPESKPDPENGTPKDQHSRTPVDPHAIVPSNTDFAFSLYK 303
M+ +ALGL++ G+C V C P+ + + KD+ + T +D + NTDFAFSLYK
Sbjct: 1 MAFIVALGLVITGICPGVLCFPDGTLERDTLFHKDKENGTQLDSLTLASINTDFAFSLYK 60
Query: 304 QLVSLDPSKNVIFSPLSVSIALAFLSLGARGPTLTELLEGLKFNLTKTPEAEIHQGFQHL 483
+L +P N++FSPLS+S ALA +SLGA+G TL E+LEGL FNLT+TPEA+IHQGF HL
Sbjct: 61 KLALKNPDTNIVFSPLSISAALAIVSLGAKGNTLEEILEGLNFNLTETPEADIHQGFGHL 120
Query: 484 LQALSQPSNLLQLNVGNAMFVDEHLKLLDEFRRDAQAKFASDVFSTNFKDPGAAVVFIND 663
LQ LS P +Q++ G+A+FV++HL++L EF+ A+A + ++ F+ +F+ P A IND
Sbjct: 121 LQRLSHPGEQVQISTGSALFVEKHLQILAEFQEKARALYQAEAFTADFQQPLEATKLIND 180
Query: 664 YVKNKTKGKIPKLFDEHATFSVMVLVNYIYFNAKWKTPFDPEHTIESTFQVSKNRTVKVP 843
YV N+T+ KI L + T ++MVLVNYIYF KWK PF+P T ES F + R+VKVP
Sbjct: 181 YVSNQTQRKIKGLISDLDTDTLMVLVNYIYFKGKWKMPFNPRDTFESEFYLDVKRSVKVP 240
Query: 844 MMSLRGLETPYFRDEELACTVVELPYTSNDSALFILPDDGRMAAVEAKLLPETLRRWRDS 1023
MM ++ L TPYFRDEEL+CTVVEL Y N SALFILPD GRM VEA L PETLR+W++S
Sbjct: 241 MMKIKTLTTPYFRDEELSCTVVELKYKGNASALFILPDQGRMQQVEASLQPETLRKWKNS 300
Query: 1024 LQPRRIDALYLPRFSVSGDYQLKDTLKQLGIQKVFTHEADLSGVTGDNKLGVSKVIHKAV 1203
L+PR++ LYLP+FS+S DY LK+ L +LGI+++F+ +ADLSG+TG L VS+++HKAV
Sbjct: 301 LRPRKMGELYLPKFSISTDYSLKNILPELGIKEIFSKQADLSGITGTKDLIVSQMVHKAV 360
Query: 1204 LDVXXXXXXXXXXXXXXXXXSTLYSLTVSFSSPFLFAVIDKDTGTVLFLGKVADPSPA 1377
LDV + + ++ F+ FL + D T LF+ K+ P A
Sbjct: 361 LDVAETGTEGVAATGVNFRILSRRT-SLWFNRTFLMVISHTDVQTTLFIAKITHPKRA 417
>ref|NP_001161766.1| serine protease inhibitor A3F [Mus musculus].
Length = 445
Score = 400 bits (1027), Expect = e-111
Identities = 202/408 (49%), Positives = 276/408 (67%), Gaps = 3/408 (0%)
Frame = +1
Query: 154 VAGLCSSVHCVPESKPDPENGTPKDQHSRTPVDPHAIVPSNTDFAFSLYKQLVSLDPSKN 333
+AG+ +V P+ + Q + T VD + SNTDFAFSLYK+LV +P +N
Sbjct: 1 MAGVSPAVFGCPDVTLGRNTAVREVQENITSVDSLTLASSNTDFAFSLYKELVLKNPDEN 60
Query: 334 VIFSPLSVSIALAFLSLGARGPTLTELLEGLKFNLTKTPEAEIHQGFQHLLQALSQPSNL 513
V+FSP S+ ALA LSLGA+ TL E+LEGLKFNLT+TPE +IHQGF++LL LSQP N
Sbjct: 61 VVFSPFSICTALALLSLGAKSNTLKEILEGLKFNLTETPEPDIHQGFRYLLDLLSQPGNQ 120
Query: 514 LQLNVGNAMFVDEHLKLLDEFRRDAQAKFASDVFSTNFKDPGAAVVFINDYVKNKTKGKI 693
+Q++ G+A+F+++HL++L EF+ A+A + ++ F+ +F+ P A INDYV N T+GKI
Sbjct: 121 VQISTGSALFIEKHLQILAEFKEKARALYQAEAFTADFQQPLEATKLINDYVSNHTQGKI 180
Query: 694 PKLFDEHATFSVMVLVNYIYFNAKWKTPFDPEHTIESTFQVSKNRTVKVPMMSLRGLETP 873
+L + ++MVLVNYIYF KW+ PFDP+ T +S F + +NR+VKVPMM + L TP
Sbjct: 181 KELISDLDKRTLMVLVNYIYFKGKWEMPFDPDDTCKSEFYLDENRSVKVPMMKINNLTTP 240
Query: 874 YFRDEELACTVVELPYTSNDSALFILPDDGRMAAVEAKLLPETLRRWRDSLQPRRIDALY 1053
YFRDEEL+CTVVEL YT N SA+FILPD G+M VEA L PETLR W+DSL+PR I+ L
Sbjct: 241 YFRDEELSCTVVELKYTGNASAMFILPDQGKMQQVEASLQPETLRNWKDSLKPRLINELC 300
Query: 1054 LPRFSVSGDYQLKDTLKQLGIQKVFTHEADLSGVTGDNKLGVSKVIHKAVLDV---XXXX 1224
LP+FS+S DY L+ L +LGI+++F+ +ADLS +TG L S+V+HKAVLDV
Sbjct: 301 LPKFSISTDYSLEHILPELGIRELFSTQADLSAITGTKDLRTSQVVHKAVLDVAETGTEA 360
Query: 1225 XXXXXXXXXXXXXSTLYSLTVSFSSPFLFAVIDKDTGTVLFLGKVADP 1368
+YS+ + F PFL + D +T LF+ KV++P
Sbjct: 361 AAGTGYQNLQCCQGVIYSMKIYFDRPFLMIISDTNTHIALFMAKVSNP 408
>ref|NP_001028507.2| serine protease inhibitor A3F [Mus musculus].
Length = 445
Score = 400 bits (1027), Expect = e-111
Identities = 202/408 (49%), Positives = 276/408 (67%), Gaps = 3/408 (0%)
Frame = +1
Query: 154 VAGLCSSVHCVPESKPDPENGTPKDQHSRTPVDPHAIVPSNTDFAFSLYKQLVSLDPSKN 333
+AG+ +V P+ + Q + T VD + SNTDFAFSLYK+LV +P +N
Sbjct: 1 MAGVSPAVFGCPDVTLGRNTAVREVQENITSVDSLTLASSNTDFAFSLYKELVLKNPDEN 60
Query: 334 VIFSPLSVSIALAFLSLGARGPTLTELLEGLKFNLTKTPEAEIHQGFQHLLQALSQPSNL 513
V+FSP S+ ALA LSLGA+ TL E+LEGLKFNLT+TPE +IHQGF++LL LSQP N
Sbjct: 61 VVFSPFSICTALALLSLGAKSNTLKEILEGLKFNLTETPEPDIHQGFRYLLDLLSQPGNQ 120
Query: 514 LQLNVGNAMFVDEHLKLLDEFRRDAQAKFASDVFSTNFKDPGAAVVFINDYVKNKTKGKI 693
+Q++ G+A+F+++HL++L EF+ A+A + ++ F+ +F+ P A INDYV N T+GKI
Sbjct: 121 VQISTGSALFIEKHLQILAEFKEKARALYQAEAFTADFQQPLEATKLINDYVSNHTQGKI 180
Query: 694 PKLFDEHATFSVMVLVNYIYFNAKWKTPFDPEHTIESTFQVSKNRTVKVPMMSLRGLETP 873
+L + ++MVLVNYIYF KW+ PFDP+ T +S F + +NR+VKVPMM + L TP
Sbjct: 181 KELISDLDKRTLMVLVNYIYFKGKWEMPFDPDDTCKSEFYLDENRSVKVPMMKINNLTTP 240
Query: 874 YFRDEELACTVVELPYTSNDSALFILPDDGRMAAVEAKLLPETLRRWRDSLQPRRIDALY 1053
YFRDEEL+CTVVEL YT N SA+FILPD G+M VEA L PETLR W+DSL+PR I+ L
Sbjct: 241 YFRDEELSCTVVELKYTGNASAMFILPDQGKMQQVEASLQPETLRNWKDSLKPRLINELC 300
Query: 1054 LPRFSVSGDYQLKDTLKQLGIQKVFTHEADLSGVTGDNKLGVSKVIHKAVLDV---XXXX 1224
LP+FS+S DY L+ L +LGI+++F+ +ADLS +TG L S+V+HKAVLDV
Sbjct: 301 LPKFSISTDYSLEHILPELGIRELFSTQADLSAITGTKDLRTSQVVHKAVLDVAETGTEA 360
Query: 1225 XXXXXXXXXXXXXSTLYSLTVSFSSPFLFAVIDKDTGTVLFLGKVADP 1368
+YS+ + F PFL + D +T LF+ KV++P
Sbjct: 361 AAGTGYQNLQCCQGVIYSMKIYFDRPFLMIISDTNTHIALFMAKVSNP 408
>ref|NP_001161767.1| serine protease inhibitor A3F [Mus musculus].
Length = 445
Score = 400 bits (1027), Expect = e-111
Identities = 202/408 (49%), Positives = 276/408 (67%), Gaps = 3/408 (0%)
Frame = +1
Query: 154 VAGLCSSVHCVPESKPDPENGTPKDQHSRTPVDPHAIVPSNTDFAFSLYKQLVSLDPSKN 333
+AG+ +V P+ + Q + T VD + SNTDFAFSLYK+LV +P +N
Sbjct: 1 MAGVSPAVFGCPDVTLGRNTAVREVQENITSVDSLTLASSNTDFAFSLYKELVLKNPDEN 60
Query: 334 VIFSPLSVSIALAFLSLGARGPTLTELLEGLKFNLTKTPEAEIHQGFQHLLQALSQPSNL 513
V+FSP S+ ALA LSLGA+ TL E+LEGLKFNLT+TPE +IHQGF++LL LSQP N
Sbjct: 61 VVFSPFSICTALALLSLGAKSNTLKEILEGLKFNLTETPEPDIHQGFRYLLDLLSQPGNQ 120
Query: 514 LQLNVGNAMFVDEHLKLLDEFRRDAQAKFASDVFSTNFKDPGAAVVFINDYVKNKTKGKI 693
+Q++ G+A+F+++HL++L EF+ A+A + ++ F+ +F+ P A INDYV N T+GKI
Sbjct: 121 VQISTGSALFIEKHLQILAEFKEKARALYQAEAFTADFQQPLEATKLINDYVSNHTQGKI 180
Query: 694 PKLFDEHATFSVMVLVNYIYFNAKWKTPFDPEHTIESTFQVSKNRTVKVPMMSLRGLETP 873
+L + ++MVLVNYIYF KW+ PFDP+ T +S F + +NR+VKVPMM + L TP
Sbjct: 181 KELISDLDKRTLMVLVNYIYFKGKWEMPFDPDDTCKSEFYLDENRSVKVPMMKINNLTTP 240
Query: 874 YFRDEELACTVVELPYTSNDSALFILPDDGRMAAVEAKLLPETLRRWRDSLQPRRIDALY 1053
YFRDEEL+CTVVEL YT N SA+FILPD G+M VEA L PETLR W+DSL+PR I+ L
Sbjct: 241 YFRDEELSCTVVELKYTGNASAMFILPDQGKMQQVEASLQPETLRNWKDSLKPRLINELC 300
Query: 1054 LPRFSVSGDYQLKDTLKQLGIQKVFTHEADLSGVTGDNKLGVSKVIHKAVLDV---XXXX 1224
LP+FS+S DY L+ L +LGI+++F+ +ADLS +TG L S+V+HKAVLDV
Sbjct: 301 LPKFSISTDYSLEHILPELGIRELFSTQADLSAITGTKDLRTSQVVHKAVLDVAETGTEA 360
Query: 1225 XXXXXXXXXXXXXSTLYSLTVSFSSPFLFAVIDKDTGTVLFLGKVADP 1368
+YS+ + F PFL + D +T LF+ KV++P
Sbjct: 361 AAGTGYQNLQCCQGVIYSMKIYFDRPFLMIISDTNTHIALFMAKVSNP 408
>ref|NP_001186869.1| serine (or cysteine) peptidase inhibitor, clade A, member 3I [Mus
musculus].
Length = 408
Score = 391 bits (1004), Expect = e-109
Identities = 200/407 (49%), Positives = 273/407 (67%), Gaps = 2/407 (0%)
Frame = +1
Query: 154 VAGLCSSVHCVPESKPDPENGTPKDQHSRTPVDPHAIVPSNTDFAFSLYKQLVSLDPSKN 333
+AG+ +V P+ + + Q + T D + SNTDFAFSLY++LV +P +N
Sbjct: 1 MAGVSPAVLGCPDVTLERNTAVHEVQENITSGDSLTVASSNTDFAFSLYRKLVLKNPDEN 60
Query: 334 VIFSPLSVSIALAFLSLGARGPTLTELLEGLKFNLTKTPEAEIHQGFQHLLQALSQPSNL 513
V+FSP S+ ALA LSLGA+ TL E+LEGLKFNLT+TPE +IHQGF++LL LSQP +
Sbjct: 61 VVFSPFSIFTALALLSLGAKSNTLKEILEGLKFNLTETPEPDIHQGFRYLLDLLSQPGDQ 120
Query: 514 LQLNVGNAMFVDEHLKLLDEFRRDAQAKFASDVFSTNFKDPGAAVVFINDYVKNKTKGKI 693
+Q++ G+A+FV++HL++L EF+ A+A + ++ F+ +F P A INDYV N+T+GKI
Sbjct: 121 VQISTGSALFVEKHLQILAEFKEKARALYQAEAFTADFLQPCQAKKLINDYVSNQTQGKI 180
Query: 694 PKLFDEHATFSVMVLVNYIYFNAKWKTPFDPEHTIESTFQVSKNRTVKVPMMSLRGLETP 873
+L + ++MVLVNYIYF KWK PFDP T S F + + R+VKVPMM + L TP
Sbjct: 181 KELISDLDKSTLMVLVNYIYFKGKWKMPFDPRDTFNSKFYLDEKRSVKVPMMKIEELTTP 240
Query: 874 YFRDEELACTVVELPYTSNDSALFILPDDGRMAAVEAKLLPETLRRWRDSLQPRRIDALY 1053
YFRD+EL+C+VVEL YT N SALFILPD G+M VE L PETLR+W++SL+P RI L+
Sbjct: 241 YFRDDELSCSVVELKYTGNASALFILPDQGKMQQVETSLHPETLRKWKNSLKPSRISELH 300
Query: 1054 LPRFSVSGDYQLKDTLKQLGIQKVFTHEADLSGVTGDNKLGVSKVIHKAVLDV--XXXXX 1227
LP+FS+S DY L+ L LGI++VF+ +ADLS +TG L VS+V+HKAVLDV
Sbjct: 301 LPKFSISNDYSLEHVLPVLGIREVFSMQADLSAITGTMDLRVSQVVHKAVLDVTETGTEA 360
Query: 1228 XXXXXXXXXXXXSTLYSLTVSFSSPFLFAVIDKDTGTVLFLGKVADP 1368
+YS+T+ F PFL + D +T LF+ KV +P
Sbjct: 361 AAATGVKVNLRCGKIYSMTIYFKRPFLIIISDINTHIALFMAKVTNP 407
>ref|XP_003085882.1| PREDICTED: serine protease inhibitor A3F isoform 1 [Mus musculus].
Length = 408
Score = 388 bits (997), Expect = e-108
Identities = 199/407 (48%), Positives = 273/407 (67%), Gaps = 2/407 (0%)
Frame = +1
Query: 154 VAGLCSSVHCVPESKPDPENGTPKDQHSRTPVDPHAIVPSNTDFAFSLYKQLVSLDPSKN 333
+AG+ +V P+ + + Q + T D + SNTDFAFSLY++LV +P +N
Sbjct: 1 MAGVSPAVLGCPDVTLERNTAVHEVQENITSGDSLTVASSNTDFAFSLYRKLVLKNPDEN 60
Query: 334 VIFSPLSVSIALAFLSLGARGPTLTELLEGLKFNLTKTPEAEIHQGFQHLLQALSQPSNL 513
V+FSP S+ ALA LSLGA+ TL E+LEGLKFNLT+TPE +IHQGF++LL LSQP +
Sbjct: 61 VVFSPFSIFTALALLSLGAKSNTLKEILEGLKFNLTETPEPDIHQGFRYLLDLLSQPGDQ 120
Query: 514 LQLNVGNAMFVDEHLKLLDEFRRDAQAKFASDVFSTNFKDPGAAVVFINDYVKNKTKGKI 693
+Q++ G+A+FV++HL++L EF+ A+A + ++ F+ +F P A INDYV N+T+GKI
Sbjct: 121 VQISTGSALFVEKHLQILAEFKEKARALYQAEAFTADFLQPCQAKKLINDYVSNQTQGKI 180
Query: 694 PKLFDEHATFSVMVLVNYIYFNAKWKTPFDPEHTIESTFQVSKNRTVKVPMMSLRGLETP 873
+L + ++MVLVNYIYF KWK PFDP T S F + + R+VKVPMM + L TP
Sbjct: 181 KELISDLDKSTLMVLVNYIYFKGKWKMPFDPRDTFNSKFYLDEKRSVKVPMMKIEELTTP 240
Query: 874 YFRDEELACTVVELPYTSNDSALFILPDDGRMAAVEAKLLPETLRRWRDSLQPRRIDALY 1053
YFRD+EL+C+VVEL YT N SALFILPD G+M VE L PETLR+W++SL+P RI L+
Sbjct: 241 YFRDDELSCSVVELKYTGNASALFILPDQGKMQQVETSLHPETLRKWKNSLKPSRISELH 300
Query: 1054 LPRFSVSGDYQLKDTLKQLGIQKVFTHEADLSGVTGDNKLGVSKVIHKAVLDV--XXXXX 1227
LP+FS+S DY L+ L LGI++VF+ +ADLS +TG VS+V+HKAVLDV
Sbjct: 301 LPKFSISNDYSLEHILPVLGIREVFSMQADLSAITGTMDPRVSQVVHKAVLDVAETGTEA 360
Query: 1228 XXXXXXXXXXXXSTLYSLTVSFSSPFLFAVIDKDTGTVLFLGKVADP 1368
+YS+T+ F+ PFL + D +T LF+ KV +P
Sbjct: 361 AAATGVKVNLRCGKIYSMTIYFNRPFLMIISDINTHIALFMAKVTNP 407
>ref|XP_003085883.1| PREDICTED: serine protease inhibitor A3F isoform 2 [Mus musculus].
Length = 408
Score = 388 bits (997), Expect = e-108
Identities = 199/407 (48%), Positives = 273/407 (67%), Gaps = 2/407 (0%)
Frame = +1
Query: 154 VAGLCSSVHCVPESKPDPENGTPKDQHSRTPVDPHAIVPSNTDFAFSLYKQLVSLDPSKN 333
+AG+ +V P+ + + Q + T D + SNTDFAFSLY++LV +P +N
Sbjct: 1 MAGVSPAVLGCPDVTLERNTAVHEVQENITSGDSLTVASSNTDFAFSLYRKLVLKNPDEN 60
Query: 334 VIFSPLSVSIALAFLSLGARGPTLTELLEGLKFNLTKTPEAEIHQGFQHLLQALSQPSNL 513
V+FSP S+ ALA LSLGA+ TL E+LEGLKFNLT+TPE +IHQGF++LL LSQP +
Sbjct: 61 VVFSPFSIFTALALLSLGAKSNTLKEILEGLKFNLTETPEPDIHQGFRYLLDLLSQPGDQ 120
Query: 514 LQLNVGNAMFVDEHLKLLDEFRRDAQAKFASDVFSTNFKDPGAAVVFINDYVKNKTKGKI 693
+Q++ G+A+FV++HL++L EF+ A+A + ++ F+ +F P A INDYV N+T+GKI
Sbjct: 121 VQISTGSALFVEKHLQILAEFKEKARALYQAEAFTADFLQPCQAKKLINDYVSNQTQGKI 180
Query: 694 PKLFDEHATFSVMVLVNYIYFNAKWKTPFDPEHTIESTFQVSKNRTVKVPMMSLRGLETP 873
+L + ++MVLVNYIYF KWK PFDP T S F + + R+VKVPMM + L TP
Sbjct: 181 KELISDLDKSTLMVLVNYIYFKGKWKMPFDPRDTFNSKFYLDEKRSVKVPMMKIEELTTP 240
Query: 874 YFRDEELACTVVELPYTSNDSALFILPDDGRMAAVEAKLLPETLRRWRDSLQPRRIDALY 1053
YFRD+EL+C+VVEL YT N SALFILPD G+M VE L PETLR+W++SL+P RI L+
Sbjct: 241 YFRDDELSCSVVELKYTGNASALFILPDQGKMQQVETSLHPETLRKWKNSLKPSRISELH 300
Query: 1054 LPRFSVSGDYQLKDTLKQLGIQKVFTHEADLSGVTGDNKLGVSKVIHKAVLDV--XXXXX 1227
LP+FS+S DY L+ L LGI++VF+ +ADLS +TG VS+V+HKAVLDV
Sbjct: 301 LPKFSISNDYSLEHILPVLGIREVFSMQADLSAITGTMDPRVSQVVHKAVLDVAETGTEA 360
Query: 1228 XXXXXXXXXXXXSTLYSLTVSFSSPFLFAVIDKDTGTVLFLGKVADP 1368
+YS+T+ F+ PFL + D +T LF+ KV +P
Sbjct: 361 AAATGVKVNLRCGKIYSMTIYFNRPFLMIISDINTHIALFMAKVTNP 407
>ref|NP_035588.2| serine protease inhibitor A3K precursor [Mus musculus].
Length = 418
Score = 387 bits (993), Expect = e-107
Identities = 201/417 (48%), Positives = 279/417 (66%), Gaps = 2/417 (0%)
Frame = +1
Query: 124 MSPFLALGL-LVAGLCSSVHCVPESKPDPENGTPKDQHSRTPVDPHAIVPSNTDFAFSLY 300
M+ +A+G+ L+AG+C +V C P+ + + + Q + T D + NTDFAFSLY
Sbjct: 1 MAFIVAMGMILMAGICPAVLCFPDGTKEMDIVFHEHQDNGTQDDSLTLASVNTDFAFSLY 60
Query: 301 KQLVSLDPSKNVIFSPLSVSIALAFLSLGARGPTLTELLEGLKFNLTKTPEAEIHQGFQH 480
K+L + KN++FSPLS+S ALA +SLGA+G T+ E+LEGLKFNLT+TPEA+IHQGF +
Sbjct: 61 KKLALKNQDKNIVFSPLSISAALALVSLGAKGKTMEEILEGLKFNLTETPEADIHQGFGN 120
Query: 481 LLQALSQPSNLLQLNVGNAMFVDEHLKLLDEFRRDAQAKFASDVFSTNFKDPGAAVVFIN 660
LLQ+LSQP + Q+N+GNAMF+++ L++L EF +A + ++ F+ +F+ P A IN
Sbjct: 121 LLQSLSQPEDQDQINIGNAMFIEKDLQILAEFHEKTRALYQTEAFTADFQQPTEAKNLIN 180
Query: 661 DYVKNKTKGKIPKLFDEHATFSVMVLVNYIYFNAKWKTPFDPEHTIESTFQVSKNRTVKV 840
DYV N+T+G I KL E ++MVLVNYIYF KWK FDP+ T ES F + + R+VKV
Sbjct: 181 DYVSNQTQGMIKKLISELDDGTLMVLVNYIYFKGKWKISFDPQDTFESEFYLDEKRSVKV 240
Query: 841 PMMSLRGLETPYFRDEELACTVVELPYTSNDSALFILPDDGRMAAVEAKLLPETLRRWRD 1020
PMM ++ L +FRDEEL+C+V+EL YT N SAL ILPD GRM VEA L PETLR+WR
Sbjct: 241 PMMKMKLLTARHFRDEELSCSVLELKYTGNASALLILPDQGRMQQVEASLQPETLRKWRK 300
Query: 1021 SLQPRRIDALYLPRFSVSGDYQL-KDTLKQLGIQKVFTHEADLSGVTGDNKLGVSKVIHK 1197
+L +I+ L LP+FS++ DY+L +D L ++GI++VFT +ADLSG+T KL VS+V+HK
Sbjct: 301 TLFSSQIEELNLPKFSIASDYRLEEDVLPEMGIKEVFTEQADLSGITEAKKLSVSQVVHK 360
Query: 1198 AVLDVXXXXXXXXXXXXXXXXXSTLYSLTVSFSSPFLFAVIDKDTGTVLFLGKVADP 1368
AVLDV V F+ PFL + ++LF+ KV +P
Sbjct: 361 AVLDVAETGTEAAAATGVIGGIRKAVLPAVCFNRPFLIVIYHTSAQSILFMAKVNNP 417
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 53,592,188
Number of extensions: 1600822
Number of successful extensions: 8726
Number of sequences better than 1.0e-05: 82
Number of HSP's gapped: 8369
Number of HSP's successfully gapped: 88
Length of query: 501
Length of database: 15,617,559
Length adjustment: 106
Effective length of query: 395
Effective length of database: 12,433,743
Effective search space: 4911328485
Effective search space used: 4911328485
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-000820
(1503 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_001928857.3| PREDICTED: serpin A3-8 [Sus scrofa]. 571 e-163
Alignment gi|XP_001928879.1| PREDICTED: serpin A3-6 [Sus scrofa]. 550 e-157
Alignment gi|XP_001928637.3| PREDICTED: serpin A3-5 [Sus scrofa]. 536 e-152
Alignment gi|NP_998952.1| alpha-1-antichymotrypsin 2 [Sus scrofa]. 518 e-147
Alignment gi|XP_003356841.1| PREDICTED: serpin A3-8-like, partial [Sus sc... 389 e-108
Alignment gi|XP_001928507.1| PREDICTED: serpin A11 [Sus scrofa]. 307 9e-84
Alignment gi|XP_003356835.1| PREDICTED: serpin A11 [Sus scrofa]. 306 3e-83
Alignment gi|NP_999560.1| alpha-1-antitrypsin precursor [Sus scrofa]. 296 2e-80
Alignment gi|NP_999223.1| thyroxine-binding globulin precursor [Sus scrof... 291 9e-79
Alignment gi|XP_003361568.1| PREDICTED: thyroxine-binding globulin-like [... 290 2e-78
>ref|XP_001928857.3| PREDICTED: serpin A3-8 [Sus scrofa].
Length = 423
Score = 571 bits (1471), Expect = e-163
Identities = 298/423 (70%), Positives = 338/423 (79%)
Frame = +1
Query: 109 MKAEGMSPFLALGLLVAGLCSSVHCVPESKPDPENGTPKDQHSRTPVDPHAIVPSNTDFA 288
M+AEGMS FLALGLLVAGLCS VHCVP + T K Q ++ P A+V SNTDFA
Sbjct: 1 MRAEGMSLFLALGLLVAGLCSRVHCVPADDLASKTVTLKGQITKLPAHNTAVVSSNTDFA 60
Query: 289 FSLYKQLVSLDPSKNVIFSPLSVSIALAFLSLGARGPTLTELLEGLKFNLTKTPEAEIHQ 468
FSLYKQLVSLDP+KNVIFSPLSVSIALAFLSLGARG TLTELLEGLKFNLTKTPEAEIHQ
Sbjct: 61 FSLYKQLVSLDPNKNVIFSPLSVSIALAFLSLGARGSTLTELLEGLKFNLTKTPEAEIHQ 120
Query: 469 GFQHLLQALSQPSNLLQLNVGNAMFVDEHLKLLDEFRRDAQAKFASDVFSTNFKDPGAAV 648
GFQHLL+ALSQPSNLLQLNVGNAMFVDE LKLLD+F +DA+ + S+VFS +FKD AAV
Sbjct: 121 GFQHLLRALSQPSNLLQLNVGNAMFVDERLKLLDKFVQDARELYFSEVFSISFKDSDAAV 180
Query: 649 VFINDYVKNKTKGKIPKLFDEHATFSVMVLVNYIYFNAKWKTPFDPEHTIESTFQVSKNR 828
FIN+YVKNKTKGKI LF + + +V+VLVN IYF AKWKTPFDP T E+ F VSKNR
Sbjct: 181 EFINNYVKNKTKGKIVDLFKQLSPDTVLVLVNCIYFKAKWKTPFDPSFTTEADFHVSKNR 240
Query: 829 TVKVPMMSLRGLETPYFRDEELACTVVELPYTSNDSALFILPDDGRMAAVEAKLLPETLR 1008
TV+VPMM + G PYFRDEELACTVVELPYTSNDSALFILPDDGRMAAVEA+LLPETLR
Sbjct: 241 TVRVPMMGISGRTLPYFRDEELACTVVELPYTSNDSALFILPDDGRMAAVEAQLLPETLR 300
Query: 1009 RWRDSLQPRRIDALYLPRFSVSGDYQLKDTLKQLGIQKVFTHEADLSGVTGDNKLGVSKV 1188
RWRDSL RRI AL+LPRFSVSGDY L D L LGI+KVF+H+ADLSG+T +L VS+V
Sbjct: 301 RWRDSLHQRRITALHLPRFSVSGDYTLHDILPHLGIKKVFSHQADLSGITDQARLKVSQV 360
Query: 1189 IHKAVLDVXXXXXXXXXXXXXXXXXSTLYSLTVSFSSPFLFAVIDKDTGTVLFLGKVADP 1368
+H+AVLDV +++ LTV F+ PFLF++I KDT +++F GKV DP
Sbjct: 361 VHRAVLDVDEEGTEGAAATGISIELTSIEFLTVHFNRPFLFSIIHKDTQSIIFSGKVTDP 420
Query: 1369 SPA 1377
S A
Sbjct: 421 SQA 423
>ref|XP_001928879.1| PREDICTED: serpin A3-6 [Sus scrofa].
Length = 423
Score = 550 bits (1418), Expect = e-157
Identities = 288/423 (68%), Positives = 330/423 (78%)
Frame = +1
Query: 109 MKAEGMSPFLALGLLVAGLCSSVHCVPESKPDPENGTPKDQHSRTPVDPHAIVPSNTDFA 288
M+AEGMS FLALGLLVAGLCS VHCVP + T K Q ++ P A+V SNTDFA
Sbjct: 1 MRAEGMSLFLALGLLVAGLCSRVHCVPADDLASKIVTLKGQITKLPAHNTAVVSSNTDFA 60
Query: 289 FSLYKQLVSLDPSKNVIFSPLSVSIALAFLSLGARGPTLTELLEGLKFNLTKTPEAEIHQ 468
FSLYKQLVSLDPSKNVIFSPLSVSIALAFLSLGA+G TLTELLEGLKFNLTKTPEAEIHQ
Sbjct: 61 FSLYKQLVSLDPSKNVIFSPLSVSIALAFLSLGAQGSTLTELLEGLKFNLTKTPEAEIHQ 120
Query: 469 GFQHLLQALSQPSNLLQLNVGNAMFVDEHLKLLDEFRRDAQAKFASDVFSTNFKDPGAAV 648
GFQHLLQALSQPSNLLQLNVGNAMFVDEHLKLLD+F +DA+ + S+ F TNF+D AA
Sbjct: 121 GFQHLLQALSQPSNLLQLNVGNAMFVDEHLKLLDKFVQDARELYHSEAFPTNFQDLEAAR 180
Query: 649 VFINDYVKNKTKGKIPKLFDEHATFSVMVLVNYIYFNAKWKTPFDPEHTIESTFQVSKNR 828
INDYVKNKT+GKI +L + +V VLVNYIYF A+W T FDP T E+ F VSKN+
Sbjct: 181 RLINDYVKNKTEGKIVELIKKLFPRTVAVLVNYIYFKAQWMTHFDPNLTTEADFYVSKNK 240
Query: 829 TVKVPMMSLRGLETPYFRDEELACTVVELPYTSNDSALFILPDDGRMAAVEAKLLPETLR 1008
TVKVPMM ++ L PYFRDEELACTVVELPYTSNDS LFILPDDGRMAAVEA LLPE LR
Sbjct: 241 TVKVPMMGIKNLTVPYFRDEELACTVVELPYTSNDSTLFILPDDGRMAAVEANLLPEMLR 300
Query: 1009 RWRDSLQPRRIDALYLPRFSVSGDYQLKDTLKQLGIQKVFTHEADLSGVTGDNKLGVSKV 1188
RWRDSLQPRRIDAL+LPRFS+S DY+L++ L +LGI+++F+ EADLSG+T L VS+V
Sbjct: 301 RWRDSLQPRRIDALHLPRFSISSDYKLEEILPRLGIKEIFSAEADLSGITDTKPLYVSQV 360
Query: 1189 IHKAVLDVXXXXXXXXXXXXXXXXXSTLYSLTVSFSSPFLFAVIDKDTGTVLFLGKVADP 1368
+H AVLDV + + V F SPFLFA + +DT +++FLGKV +P
Sbjct: 361 VHSAVLDVDEEGTEGAASTGVVIERKSFENFIVRFDSPFLFATVLRDTQSIIFLGKVVNP 420
Query: 1369 SPA 1377
PA
Sbjct: 421 HPA 423
>ref|XP_001928637.3| PREDICTED: serpin A3-5 [Sus scrofa].
Length = 393
Score = 536 bits (1381), Expect = e-152
Identities = 286/389 (73%), Positives = 306/389 (78%)
Frame = +1
Query: 22 NPQTCWPTGALRAGGGSGSTQRIPLCEAGMKAEGMSPFLALGLLVAGLCSSVHCVPESKP 201
N Q + ALRAGGGSGSTQRI LCEA P
Sbjct: 31 NGQRLLESPALRAGGGSGSTQRILLCEAA----------------------------DDP 62
Query: 202 DPENGTPKDQHSRTPVDPHAIVPSNTDFAFSLYKQLVSLDPSKNVIFSPLSVSIALAFLS 381
+ T KDQ + P A+V SNTDFAFSLYKQL +P +NVIFSPLSVS+ALAFLS
Sbjct: 63 ASKIVTLKDQIRKLPAHNTAVVSSNTDFAFSLYKQLALTNPHENVIFSPLSVSMALAFLS 122
Query: 382 LGARGPTLTELLEGLKFNLTKTPEAEIHQGFQHLLQALSQPSNLLQLNVGNAMFVDEHLK 561
LGARGPTLTELLEGLKFNLTKTPEAEIHQGFQHLL L + SNLLQL +GNAMF+DE L+
Sbjct: 123 LGARGPTLTELLEGLKFNLTKTPEAEIHQGFQHLLSTLDRSSNLLQLRLGNAMFIDEQLE 182
Query: 562 LLDEFRRDAQAKFASDVFSTNFKDPGAAVVFINDYVKNKTKGKIPKLFDEHATFSVMVLV 741
LLD+F +DA + S+ F TNF+D AA INDYVKNKT+GKI LF + + +VLV
Sbjct: 183 LLDKFVQDAHELYHSEAFPTNFQDLEAARRLINDYVKNKTEGKIVDLFKKLDPLTKVVLV 242
Query: 742 NYIYFNAKWKTPFDPEHTIESTFQVSKNRTVKVPMMSLRGLETPYFRDEELACTVVELPY 921
NYIYF AKWKTPFDPEHTIESTF VSKNRTVKVPMMSLRGLETPYFRDEELACTVVELPY
Sbjct: 243 NYIYFKAKWKTPFDPEHTIESTFHVSKNRTVKVPMMSLRGLETPYFRDEELACTVVELPY 302
Query: 922 TSNDSALFILPDDGRMAAVEAKLLPETLRRWRDSLQPRRIDALYLPRFSVSGDYQLKDTL 1101
TSNDSALFILPDDGRMAAVEAKLLPETLRRWRDSLQPRRIDALYLPRFSVSGDYQLKDTL
Sbjct: 303 TSNDSALFILPDDGRMAAVEAKLLPETLRRWRDSLQPRRIDALYLPRFSVSGDYQLKDTL 362
Query: 1102 KQLGIQKVFTHEADLSGVTGDNKLGVSKV 1188
KQLGIQKVFTHEADLSGVTGDNKLGVSKV
Sbjct: 363 KQLGIQKVFTHEADLSGVTGDNKLGVSKV 391
>ref|NP_998952.1| alpha-1-antichymotrypsin 2 [Sus scrofa].
Length = 415
Score = 518 bits (1333), Expect = e-147
Identities = 269/415 (64%), Positives = 311/415 (74%)
Frame = +1
Query: 124 MSPFLALGLLVAGLCSSVHCVPESKPDPENGTPKDQHSRTPVDPHAIVPSNTDFAFSLYK 303
MS FLALGLLVAGLCS VHCVP P + T KDQ + P A+V SNTDFAFSLYK
Sbjct: 1 MSLFLALGLLVAGLCSRVHCVPADDPASKIVTLKDQIKKLPAHNTAVVSSNTDFAFSLYK 60
Query: 304 QLVSLDPSKNVIFSPLSVSIALAFLSLGARGPTLTELLEGLKFNLTKTPEAEIHQGFQHL 483
QL +P +NVIFSPLSVS+ALAFLSLGARGPTLTELLEGLKFNLTKTPEAEIHQGFQHL
Sbjct: 61 QLALTNPHENVIFSPLSVSMALAFLSLGARGPTLTELLEGLKFNLTKTPEAEIHQGFQHL 120
Query: 484 LQALSQPSNLLQLNVGNAMFVDEHLKLLDEFRRDAQAKFASDVFSTNFKDPGAAVVFIND 663
L L + SNLLQL +GNAMF+DE L+LLD+F +DA + S+ F TNF+D AA IND
Sbjct: 121 LSTLDRSSNLLQLRLGNAMFIDEQLELLDKFVQDAHELYHSEAFPTNFQDLEAARRLIND 180
Query: 664 YVKNKTKGKIPKLFDEHATFSVMVLVNYIYFNAKWKTPFDPEHTIESTFQVSKNRTVKVP 843
YVKNKT+GKI LF + + +VLVNYIYF AKWKTPF+P T E+ F VSKNRTV+VP
Sbjct: 181 YVKNKTEGKIVDLFKKLDPLTKVVLVNYIYFKAKWKTPFNPNLTTEADFHVSKNRTVRVP 240
Query: 844 MMSLRGLETPYFRDEELACTVVELPYTSNDSALFILPDDGRMAAVEAKLLPETLRRWRDS 1023
MM +R L PYFRDEELACTVVELPYTSNDSALFILPDDGRMAAVEAKLLPETLRRWRD
Sbjct: 241 MMGIRALTVPYFRDEELACTVVELPYTSNDSALFILPDDGRMAAVEAKLLPETLRRWRDF 300
Query: 1024 LQPRRIDALYLPRFSVSGDYQLKDTLKQLGIQKVFTHEADLSGVTGDNKLGVSKVIHKAV 1203
LQPR I LYLP+FS+S DY+L + L QLGI+++F A+LSG+T L VS+V+H AV
Sbjct: 301 LQPRWIVELYLPKFSISSDYRLHEILPQLGIEEIFGDNANLSGITNTKPLKVSQVVHSAV 360
Query: 1204 LDVXXXXXXXXXXXXXXXXXSTLYSLTVSFSSPFLFAVIDKDTGTVLFLGKVADP 1368
LDV +L + + F+ PFLF +I KD +++FLGKV P
Sbjct: 361 LDVNEEGTEAAAATGIDINVRSLERIALHFNRPFLFVIISKDIQSIIFLGKVTKP 415
>ref|XP_003356841.1| PREDICTED: serpin A3-8-like, partial [Sus scrofa].
Length = 201
Score = 389 bits (998), Expect = e-108
Identities = 198/217 (91%), Positives = 199/217 (91%)
Frame = +1
Query: 109 MKAEGMSPFLALGLLVAGLCSSVHCVPESKPDPENGTPKDQHSRTPVDPHAIVPSNTDFA 288
MKAEGM VHCVPE KPDPENGTP DQHSRTPVDPHAIVPSNTDFA
Sbjct: 1 MKAEGM----------------VHCVPEGKPDPENGTPNDQHSRTPVDPHAIVPSNTDFA 44
Query: 289 FSLYKQLVSLDPSKNVIFSPLSVSIALAFLSLGARGPTLTELLEGLKFNLTKTPEAEIHQ 468
FSLYKQLVSLDPSKNVIFSPLSVSIALAFLSLGARGPTLTELLEGLKFNLTKTPEAEIHQ
Sbjct: 45 FSLYKQLVSLDPSKNVIFSPLSVSIALAFLSLGARGPTLTELLEGLKFNLTKTPEAEIHQ 104
Query: 469 GFQHLLQALSQPSNLLQLNVGNAMFVDEHLKLLDEFRRDAQAKFASDVFSTNFKDPGAAV 648
GFQHLLQALSQPSNLLQLNVGNAMFVDEHLKLLDEFR+DAQAKFASDVFSTNFKDPGAAV
Sbjct: 105 GFQHLLQALSQPSNLLQLNVGNAMFVDEHLKLLDEFRQDAQAKFASDVFSTNFKDPGAAV 164
Query: 649 VFINDYVKNKTKGKIPKLFDEHATFSVMVLVNYIYFN 759
VFINDYVKNKTKGKIPKLFDEHATFSVMVLVNYIYFN
Sbjct: 165 VFINDYVKNKTKGKIPKLFDEHATFSVMVLVNYIYFN 201
>ref|XP_001928507.1| PREDICTED: serpin A11 [Sus scrofa].
Length = 421
Score = 307 bits (787), Expect = 9e-84
Identities = 178/422 (42%), Positives = 257/422 (60%), Gaps = 12/422 (2%)
Frame = +1
Query: 142 LGLLVAGLCSSVHCVPESKPDPENGT--------PKDQHSRTPVDPHAIVPSNTDFAFSL 297
L LL AG+ +SVH +P P +G+ P Q S H I P+ TDFA L
Sbjct: 6 LWLLGAGILASVH-----QPFPAHGSKSLGVPEAPGRQLSGARPAYHKITPTLTDFALRL 60
Query: 298 YKQLVSLDPSKNVIFSPLSVSIALAFLSLGARGPTLTELLEGLKFNLTKTPEAEIHQGFQ 477
YKQL + P N+ FSP+S+S LA LSLGA+ T T++LEGL FNLT+ PEA+IH+GFQ
Sbjct: 61 YKQLAAETPG-NIFFSPVSISSTLALLSLGAQADTPTQILEGLGFNLTEIPEADIHRGFQ 119
Query: 478 HLLQALSQPSNLLQLNVGNAMFVDEHLKLLDEFRRDAQAKFASDVFSTNFKDPGAAVVFI 657
L++ L PS+ L++ VGN++F+D+ LK F + + + + FS NF D G I
Sbjct: 120 SLIRTLDLPSSKLEMKVGNSLFLDKQLKPQQHFLDNIREVYGALAFSANFTDSGTTRRQI 179
Query: 658 NDYVKNKTKGKIPKLFDEHATFSVMVLVNYIYFNAKWKTPFDPEHT-IESTFQVSKNRTV 834
NDY++ +T G++ +E A ++MVL+NYI+F AKWK PF+P T + +F V + ++
Sbjct: 180 NDYLRKQTYGQVVDCLEEFAQDTLMVLLNYIFFKAKWKHPFNPYQTQKQESFFVDERTSL 239
Query: 835 KVPMMSLRGLETPYFRDEELACTVVELPYTSNDSALFILPDDGRMAAVEAKLLPETLRRW 1014
+VPMM + + + D E+ACTV+++ Y+ N AL ILPD G+MA VEA L PETLR+W
Sbjct: 240 RVPMMRQKEMHR-FLYDHEVACTVLQIEYSGNAQALLILPDPGKMAQVEAALQPETLRKW 298
Query: 1015 RDSLQPRRIDALYLPRFSVSGDYQLKDTLKQLGIQKVFTHEADLSGVTGDNKLGVSKVIH 1194
L P +D L+LPRFS+SG Y L++ L ++G+ +FT EADLSG+TG VS+V H
Sbjct: 299 DQLLLPSLLD-LHLPRFSISGTYNLEEILPRIGLTNLFTLEADLSGITGQLNRTVSRVSH 357
Query: 1195 KAVLDVXXXXXXXXXXXXXXXXXSTLYSLT---VSFSSPFLFAVIDKDTGTVLFLGKVAD 1365
KA +D+ +L + + F+ PFL + + T ++LFLGKV +
Sbjct: 358 KAAVDMSERGTEAAAASGLLSQPQSLNTTSAPHAHFNRPFLVLLWEVTTQSLLFLGKVVN 417
Query: 1366 PS 1371
P+
Sbjct: 418 PA 419
>ref|XP_003356835.1| PREDICTED: serpin A11 [Sus scrofa].
Length = 422
Score = 306 bits (783), Expect = 3e-83
Identities = 178/420 (42%), Positives = 256/420 (60%), Gaps = 10/420 (2%)
Frame = +1
Query: 142 LGLLVAGLCSSVHCVP------ESKPDPENGTPKDQHSRTPVDPHAIVPSNTDFAFSLYK 303
L LL AG+ +SVH P +S PE P Q S H I P+ TDFA LYK
Sbjct: 6 LWLLGAGILASVHRQPFPAHGSKSLGGPE--APGRQLSGARPAYHKITPTLTDFALRLYK 63
Query: 304 QLVSLDPSKNVIFSPLSVSIALAFLSLGARGPTLTELLEGLKFNLTKTPEAEIHQGFQHL 483
QL + P N+ FSP+S+S LA LSLGA+ T T++LEGL FNLT+ PEA+IH+GFQ L
Sbjct: 64 QLAAETPG-NIFFSPVSISSTLALLSLGAQADTPTQILEGLGFNLTEIPEADIHRGFQSL 122
Query: 484 LQALSQPSNLLQLNVGNAMFVDEHLKLLDEFRRDAQAKFASDVFSTNFKDPGAAVVFIND 663
++ L PS+ L++ VGN++F+D+ LK F + + + + FS NF D G IND
Sbjct: 123 IRTLGLPSSKLEMKVGNSLFLDKQLKPQQHFLDNIREVYGALAFSANFTDSGTTRRQIND 182
Query: 664 YVKNKTKGKIPKLFDEHATFSVMVLVNYIYFNAKWKTPFDPEHT-IESTFQVSKNRTVKV 840
Y++ +T G++ +E A ++MVL+NYI+F AKWK PF+P T + +F V + +++V
Sbjct: 183 YLRKQTYGQVVDCLEEFAQDTLMVLLNYIFFKAKWKHPFNPYQTQKQESFFVDERTSLRV 242
Query: 841 PMMSLRGLETPYFRDEELACTVVELPYTSNDSALFILPDDGRMAAVEAKLLPETLRRWRD 1020
PMM + + + D E+ACTV+++ Y+ N AL ILPD G+MA VEA L PETLR+W
Sbjct: 243 PMMRQKEMHR-FLYDHEVACTVLQIEYSGNAQALLILPDPGKMAQVEAALQPETLRKWDQ 301
Query: 1021 SLQPRRIDALYLPRFSVSGDYQLKDTLKQLGIQKVFTHEADLSGVTGDNKLGVSKVIHKA 1200
L P +D L+LPRFS+SG Y L++ L ++G+ +F+ EADLSG+TG VS+V HKA
Sbjct: 302 LLLPSLLD-LHLPRFSISGTYNLEEILPRIGLTNLFSLEADLSGITGQLNRTVSRVSHKA 360
Query: 1201 VLDVXXXXXXXXXXXXXXXXXSTLYSLT---VSFSSPFLFAVIDKDTGTVLFLGKVADPS 1371
+D+ +L + + F+ PFL + + T ++LFLGKV +P+
Sbjct: 361 AVDMSERGTEAAAASGLLSQPQSLNTTSAPHAHFNRPFLVLLWEVTTQSLLFLGKVVNPA 420
>ref|NP_999560.1| alpha-1-antitrypsin precursor [Sus scrofa].
Length = 421
Score = 296 bits (759), Expect = 2e-80
Identities = 172/416 (41%), Positives = 240/416 (57%), Gaps = 8/416 (1%)
Frame = +1
Query: 148 LLVAGLCSSVHCVPESKPD-------PENGTPKDQHSR-TPVDPHAIVPSNTDFAFSLYK 303
LL+AGLC VP S + E P+ H + H I P+ DFAFSLY+
Sbjct: 10 LLLAGLCC---LVPISLAEGLQGHAVQETDVPRHDHEQHQEAACHRIAPNLADFAFSLYR 66
Query: 304 QLVSLDPSKNVIFSPLSVSIALAFLSLGARGPTLTELLEGLKFNLTKTPEAEIHQGFQHL 483
Q+ + N+ SP++++ A A LSLG +G T E+LEGL+FNLT+ EAEIH+GFQHL
Sbjct: 67 QVARQSNTSNIFLSPVTIARAFAMLSLGTKGATHAEILEGLQFNLTEKAEAEIHEGFQHL 126
Query: 484 LQALSQPSNLLQLNVGNAMFVDEHLKLLDEFRRDAQAKFASDVFSTNFKDPGAAVVFIND 663
L L+QP N LQL GN +F+DE KL+ +F D + + S+ FS NF+D A IND
Sbjct: 127 LHTLNQPDNQLQLTTGNGLFIDEKAKLVPKFLEDVKNLYHSEAFSINFRDTEEAKKCIND 186
Query: 664 YVKNKTKGKIPKLFDEHATFSVMVLVNYIYFNAKWKTPFDPEHTIESTFQVSKNRTVKVP 843
YV+ ++GKI L DE +V LVNYI+F KW+ PF+ E T E F V + TVKVP
Sbjct: 187 YVEKGSQGKIVDLVDELDKDTVFALVNYIFFKGKWEKPFEVEQTTEEDFHVDEETTVKVP 246
Query: 844 MMSLRGLETPYFRDEELACTVVELPYTSNDSALFILPDDGRMAAVEAKLLPETLRRWRDS 1023
MM+ G+ + D +L+ V+ + Y + +A FILPD G++ +E L E ++ +
Sbjct: 247 MMNRLGMFDLHHCD-KLSSWVLLMDYVATATAFFILPDQGKLHQLEDMLTKEIRAKFLEK 305
Query: 1024 LQPRRIDALYLPRFSVSGDYQLKDTLKQLGIQKVFTHEADLSGVTGDNKLGVSKVIHKAV 1203
P + L+LP+ ++SG Y LK L LGI KVF+ EADLSGVT + L +SK +H+AV
Sbjct: 306 RYPSSAN-LHLPKLTISGTYDLKSLLGNLGITKVFSDEADLSGVTEEQPLKLSKALHRAV 364
Query: 1204 LDVXXXXXXXXXXXXXXXXXSTLYSLTVSFSSPFLFAVIDKDTGTVLFLGKVADPS 1371
L + ++ V F+ PFLF + D T VLF+GKV +P+
Sbjct: 365 LTIDEKGTEATGATILEAIPMSI-PPNVKFNKPFLFLIYDTKTKAVLFMGKVMNPT 419
>ref|NP_999223.1| thyroxine-binding globulin precursor [Sus scrofa].
Length = 412
Score = 291 bits (744), Expect = 9e-79
Identities = 175/422 (41%), Positives = 246/422 (58%), Gaps = 4/422 (0%)
Frame = +1
Query: 124 MSPFLALGLLVAGLCSSVHCV-PESKPDPENGTPKDQHSRTPVDPHAIVPSNTDFAFSLY 300
M FL + LLV G +HCV P Q + T H + N DFAF+LY
Sbjct: 1 MPLFLYMVLLVLG----IHCVQPNISEGKVTSCLSPQQNATL---HKMSSINADFAFNLY 53
Query: 301 KQLVSLDPSKNVIFSPLSVSIALAFLSLGARGPTLTELLEGLKFNLTKTPEAEIHQGFQH 480
++ P +N+ FSP+S+S ALA LS GA T T++LE L +NLT+ P AEI QGFQH
Sbjct: 54 RRFAVETPDQNIFFSPVSISAALAMLSFGACSSTQTQILESLGYNLTEMPMAEIQQGFQH 113
Query: 481 LLQALSQPSNLLQLNVGNAMFVDEHLKLLDEFRRDAQAKFASDVFSTNFKDPGAAVVFIN 660
L+ +L+ P L+L +GNA+F+++ LK L +F D + + ++VFST+F + AA +N
Sbjct: 114 LICSLNFPKKELELQMGNALFIEKQLKPLAKFLDDVKNLYETEVFSTDFSNVSAAQQELN 173
Query: 661 DYVKNKTKGKIPKLFDEHATFSVMVLVNYIYFNAKWKTPFDPEHTIE-STFQVSKNRTVK 837
+V+ +TKGKI L + ++MVLVNYI F A+W PFDP T E S+F V K TV+
Sbjct: 174 SHVERQTKGKIVGLIPDLKPNTIMVLVNYICFKAQWANPFDPSKTEEGSSFLVDKTTTVQ 233
Query: 838 VPMMSLRGLETPY-FRDEELACTVVELPYTSNDSALFILPDDGRMAAVEAKLLPETLRRW 1014
VPMM +E Y D EL CTV+++ Y+ N ALF+LP++G+M VE + + L++W
Sbjct: 234 VPMM--HQMEQYYNLVDTELNCTVLQMDYSKNALALFVLPNEGQMEWVEGAMSSKILKKW 291
Query: 1015 RDSLQPRRIDALYLPRFSVSGDYQLKDTLKQLGIQKVFTHEADLSGVTGDNKLGVSKVIH 1194
LQ ID L++P+FS+S Y L D L ++GIQ F AD SG+T DN L +S H
Sbjct: 292 NRLLQKGWID-LFVPKFSMSATYDLGDILLKMGIQDAFADNADFSGLTKDNGLKLSNAAH 350
Query: 1195 KAVLDVXXXXXXXXXXXXXXXXXS-TLYSLTVSFSSPFLFAVIDKDTGTVLFLGKVADPS 1371
KAVL++ TL + F FL +++K T ++LFLGKV DP+
Sbjct: 351 KAVLNIGEKGTEAIPEVTFLNQPKITLLHPIIQFDRSFLLLILEKSTRSILFLGKVVDPT 410
Query: 1372 PA 1377
A
Sbjct: 411 EA 412
>ref|XP_003361568.1| PREDICTED: thyroxine-binding globulin-like [Sus scrofa].
Length = 420
Score = 290 bits (741), Expect = 2e-78
Identities = 174/420 (41%), Positives = 245/420 (58%), Gaps = 4/420 (0%)
Frame = +1
Query: 124 MSPFLALGLLVAGLCSSVHCV-PESKPDPENGTPKDQHSRTPVDPHAIVPSNTDFAFSLY 300
M FL + LLV G +HCV P Q + T H + N DFAF+LY
Sbjct: 9 MPLFLYMVLLVLG----IHCVQPNISEGKVTSCLSPQQNATL---HKMSSINADFAFNLY 61
Query: 301 KQLVSLDPSKNVIFSPLSVSIALAFLSLGARGPTLTELLEGLKFNLTKTPEAEIHQGFQH 480
++ P +N+ FSP+S+S ALA LS GA T T++LE L +NLT+ P AEI QGFQH
Sbjct: 62 RRFAVETPDQNIFFSPVSISAALAMLSFGACSSTQTQILESLGYNLTEMPMAEIQQGFQH 121
Query: 481 LLQALSQPSNLLQLNVGNAMFVDEHLKLLDEFRRDAQAKFASDVFSTNFKDPGAAVVFIN 660
L+ +L+ P L+L +GNA+F+++ LK L +F D + + ++VFST+F + AA +N
Sbjct: 122 LICSLNFPKKELELQMGNALFIEKQLKPLAKFLDDVKNLYETEVFSTDFSNVSAAQQELN 181
Query: 661 DYVKNKTKGKIPKLFDEHATFSVMVLVNYIYFNAKWKTPFDPEHTIE-STFQVSKNRTVK 837
+V+ +TKGKI L + ++MVLVNYI F A+W PFDP T E S+F V K TV+
Sbjct: 182 SHVERQTKGKIVGLIPDLKPNTIMVLVNYICFKAQWANPFDPSKTEEGSSFLVDKTTTVQ 241
Query: 838 VPMMSLRGLETPY-FRDEELACTVVELPYTSNDSALFILPDDGRMAAVEAKLLPETLRRW 1014
VPMM +E Y D EL CTV+++ Y+ N ALF+LP++G+M VE + + L++W
Sbjct: 242 VPMM--HQMEQYYNLVDTELNCTVLQMDYSKNALALFVLPNEGQMEWVEGAMSSKILKKW 299
Query: 1015 RDSLQPRRIDALYLPRFSVSGDYQLKDTLKQLGIQKVFTHEADLSGVTGDNKLGVSKVIH 1194
LQ ID L++P+FS+S Y L D L ++GIQ F AD SG+T DN L +S H
Sbjct: 300 NRLLQKGWID-LFVPKFSMSATYDLGDILLKMGIQDAFADNADFSGLTKDNGLKLSNAAH 358
Query: 1195 KAVLDVXXXXXXXXXXXXXXXXXS-TLYSLTVSFSSPFLFAVIDKDTGTVLFLGKVADPS 1371
KAVL++ TL + F FL +++K T ++LFLGKV DP+
Sbjct: 359 KAVLNIGEKGTEAIPEVTFLNQPKITLLHPIIQFDRSFLLLILEKSTRSILFLGKVVDPT 418
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 40,366,394
Number of extensions: 1247225
Number of successful extensions: 7135
Number of sequences better than 1.0e-05: 41
Number of HSP's gapped: 6979
Number of HSP's successfully gapped: 44
Length of query: 501
Length of database: 11,343,932
Length adjustment: 103
Effective length of query: 398
Effective length of database: 8,779,541
Effective search space: 3494257318
Effective search space used: 3494257318
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-000820
(1503 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr07 1271 0.0
>Sscrofa_Chr07
|| Length = 134764511
Score = 1271 bits (641), Expect = 0.0
Identities = 653/657 (99%)
Strand = Plus / Minus
Query: 104 caggcatgaaggcagagggcatgtcccccttcctggctctggggctcctggtggctgggc 163
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123023075 caggcatgaaggcagagggcatgtcccccttcctggctctggggctcctggtggctgggc 123023016
Query: 164 tctgctccagcgtccactgcgtccccgaaagcaaacctgacccagagaatgggaccccga 223
|||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 123023015 tctgctccagggtccactgcgtccccgaaggcaaacctgacccagagaatgggaccccga 123022956
Query: 224 aggaccagcacagcaggactcccgtggacccccacgccattgtccccagcaacaccgact 283
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123022955 acgaccagcacagcaggactcccgtggacccccacgccattgtccccagcaacaccgact 123022896
Query: 284 tcgccttcagcctctacaagcagctggtttctttagaccccagtaagaacgtcatcttct 343
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123022895 tcgccttcagcctctacaagcagctggtttctttagaccccagtaagaacgtcatcttct 123022836
Query: 344 ccccgctgagcgtctccatagccttggccttcctgtctctgggggcccgaggccccaccc 403
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123022835 ccccgctgagcgtctccatagccttggccttcctgtctctgggggcccgaggccccaccc 123022776
Query: 404 tgacagagctcctggaaggcctcaagttcaacctcacaaagacccccgaggcagaaatcc 463
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123022775 tgacagagctcctggaaggcctcaagttcaacctcacaaagacccccgaggcagaaatcc 123022716
Query: 464 accagggcttccagcacctcctgcaggccctcagccaacccagcaacctgctgcagctga 523
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123022715 accagggcttccagcacctcctgcaggccctcagccaacccagcaacctgctgcagctga 123022656
Query: 524 acgtgggcaacgccatgttcgtggatgagcatctgaagctgctggacgagttcaggcgag 583
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 123022655 acgtgggcaacgccatgttcgtggatgagcatctgaagctgctggacgagttcaggcaag 123022596
Query: 584 acgcccaggcaaagttcgcctccgatgtcttttccaccaacttcaaggatcccggggctg 643
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123022595 acgcccaggcaaagttcgcctccgatgtcttttccaccaacttcaaggatcccggggctg 123022536
Query: 644 ccgtcgtgttcatcaacgactacgtgaagaacaaaacgaaggggaaaatcccgaagctgt 703
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123022535 ccgtcgtgttcatcaacgactacgtgaagaacaaaacgaaggggaaaatcccgaagctgt 123022476
Query: 704 tcgatgaacatgccaccttctccgtgatggtcctggtgaattacatctactttaacg 760
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123022475 tcgatgaacatgccaccttctccgtgatggtcctggtgaattacatctactttaacg 123022419
Score = 1239 bits (625), Expect = 0.0
Identities = 649/657 (98%)
Strand = Plus / Plus
Query: 104 caggcatgaaggcagagggcatgtcccccttcctggctctggggctcctggtggctgggc 163
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122999378 caggcatgaaggcagagggcatgtcccccttcctggctctggggctcctggtggctgggc 122999437
Query: 164 tctgctccagcgtccactgcgtccccgaaagcaaacctgacccagagaatgggaccccga 223
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122999438 tctgctccagggtccactgcgtccccgaaagcaaacctgacccagagaatgggaccccga 122999497
Query: 224 aggaccagcacagcaggactcccgtggacccccacgccattgtccccagcaacaccgact 283
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 122999498 aggaccagcacagcaggactcccgtggacccccacgccattgttcccagcaacaccgact 122999557
Query: 284 tcgccttcagcctctacaagcagctggtttctttagaccccagtaagaacgtcatcttct 343
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122999558 tcgccttcagcctctacaagcagctggtttctttagaccccagtaagaacgtcatcttct 122999617
Query: 344 ccccgctgagcgtctccatagccttggccttcctgtctctgggggcccgaggccccaccc 403
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 122999618 ccccgctgagcgtctccatggccttggccttcctgtctctgggggcccgaggccccaccc 122999677
Query: 404 tgacagagctcctggaaggcctcaagttcaacctcacaaagacccccgaggcagaaatcc 463
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122999678 tgacagagctcctggaaggcctcaagttcaacctcacaaagacccccgaggcagaaatcc 122999737
Query: 464 accagggcttccagcacctcctgcaggccctcagccaacccagcaacctgctgcagctga 523
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122999738 accagggcttccagcacctcctgcaggccctcagccaacccagcaacctgctgcagctga 122999797
Query: 524 acgtgggcaacgccatgttcgtggatgagcatctgaagctgctggacgagttcaggcgag 583
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||
Sbjct: 122999798 acgtgggcaacgccatgttcgtggatgaacatctgaagctgctggacgagttcaggcaag 122999857
Query: 584 acgcccaggcaaagttcgcctccgatgtcttttccaccaacttcaaggatcccggggctg 643
|||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 122999858 acgcccaggcaaagtttgcctccgatgtcttttccaccaacttcaaggatcccgaggctg 122999917
Query: 644 ccgtcgtgttcatcaacgactacgtgaagaacaaaacgaaggggaaaatcccgaagctgt 703
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122999918 ccatcgtgttcatcaacgactacgtgaagaacaaaacgaaggggaaaatcccgaagctgt 122999977
Query: 704 tcgatgaacatgccaccttctccgtgatggtcctggtgaattacatctactttaacg 760
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122999978 tcgatgaacatgccaccttctccgtgatggtcctggtgaattacatctactttaacg 123000034
Score = 587 bits (296), Expect = e-165
Identities = 305/308 (99%)
Strand = Plus / Minus
Query: 269 ccagcaacaccgacttcgccttcagcctctacaagcagctggtttctttagaccccagta 328
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123101262 ccagcaacaccgacttcgccttcagcctctacaagcagctggtttctttagaccccagta 123101203
Query: 329 agaacgtcatcttctccccgctgagcgtctccatagccttggccttcctgtctctggggg 388
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123101202 agaacgtcatcttctccccgctgagcgtctccatagccttggccttcctgtctctggggg 123101143
Query: 389 cccgaggccccaccctgacagagctcctggaaggcctcaagttcaacctcacaaagaccc 448
||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123101142 cccaaggctccaccctgacagagctcctggaaggcctcaagttcaacctcacaaagaccc 123101083
Query: 449 ccgaggcagaaatccaccagggcttccagcacctcctgcaggccctcagccaacccagca 508
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123101082 ccgaggcagaaatccaccagggcttccagcacctcctgcaggccctcagccaacccagca 123101023
Query: 509 acctgctgcagctgaacgtgggcaacgccatgttcgtggatgagcatctgaagctgctgg 568
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123101022 acctgctgcagctgaacgtgggcaacgccatgttcgtggatgagcatctgaagctgctgg 123100963
Query: 569 acgagttc 576
|| |||||
Sbjct: 123100962 acaagttc 123100955
Score = 563 bits (284), Expect = e-157
Identities = 302/308 (98%)
Strand = Plus / Plus
Query: 269 ccagcaacaccgacttcgccttcagcctctacaagcagctggtttctttagaccccagta 328
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 122963832 ccagcaacaccgacttcgccttcagcctctacaagcagctggtttctttagaccccaata 122963891
Query: 329 agaacgtcatcttctccccgctgagcgtctccatagccttggccttcctgtctctggggg 388
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122963892 agaacgtcatcttctccccgctgagcgtctccatagccttggccttcctgtctctggggg 122963951
Query: 389 cccgaggccccaccctgacagagctcctggaaggcctcaagttcaacctcacaaagaccc 448
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122963952 cccgaggctccaccctgacagagctcctggaaggcctcaagttcaacctcacaaagaccc 122964011
Query: 449 ccgaggcagaaatccaccagggcttccagcacctcctgcaggccctcagccaacccagca 508
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 122964012 ccgaggcagaaatccaccagggcttccagcacctcctgcgggccctcagccaacccagca 122964071
Query: 509 acctgctgcagctgaacgtgggcaacgccatgttcgtggatgagcatctgaagctgctgg 568
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 122964072 acctgctgcagctgaacgtgggcaacgccatgttcgtggatgagcggctgaagctgctgg 122964131
Query: 569 acgagttc 576
|| |||||
Sbjct: 122964132 acaagttc 122964139
Score = 541 bits (273), Expect = e-151
Identities = 312/323 (96%), Gaps = 3/323 (0%)
Strand = Plus / Plus
Query: 1184 aggtgatccacaaggcggtgcttgatgtgggcgaggagggcacagaagcagctgctgcca 1243
||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||
Sbjct: 123002341 aggtgatccacaaggcggtgcttgatgtgggcgagaagggcacggaagcagctgctgcca 123002400
Query: 1244 ctggaattgcaatgatgacctcgaccctctacagcctcactgttagtttttccagtccct 1303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123002401 ctggaattgcaatgatgacctcgaccctctacagcctcactgttagtttttccagtccct 123002460
Query: 1304 ttctgttcgccgtaatcgacaaagacactggcactgtcctctttttgggcaaagtcgctg 1363
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123002461 ttctgttcgctgtaatcgacaaagacactggcactgtcctctttttgggcaaagtcgctg 123002520
Query: 1364 accccagccctgcctagagctcccttgctcgtggctggttcctctcnaccaggagctgag 1423
||||||| |||||||||||||||||||||||||||||||||||||| | ||||||||||
Sbjct: 123002521 accccagtcctgcctagagctcccttgctcgtggctggttcctctcaccaaggagctgag 123002580
Query: 1424 tg--ccctggtccctgggggcaggctgggccctgtgccccaagaaaa-ccccatcctggc 1480
|| | ||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 123002581 tgctctctggtccctgggggcaggctgggccctgtgccccaagaaaacccccatcctggc 123002640
Query: 1481 actgcctgctcacccttgggaag 1503
|||||||||||||||||||||||
Sbjct: 123002641 actgcctgctcacccttgggaag 123002663
Score = 537 bits (271), Expect = e-150
Identities = 274/275 (99%)
Strand = Plus / Minus
Query: 760 gccaagtggaagacgccctttgatccagaacatactatagagtccacgttccaagtgagc 819
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 123020863 gccaagtggaagacgccctttgatccagaacatactatagagtccacgttccacgtgagc 123020804
Query: 820 aagaacaggacagtgaaggtgcccatgatgagccttcgaggcctggaaacaccttacttc 879
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123020803 aagaacaggacagtgaaggtgcccatgatgagccttcgaggcctggaaacaccttacttc 123020744
Query: 880 cgggacgaggagctggcctgcacggtggtggagctcccgtacaccagcaacgacagcgcg 939
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123020743 cgggacgaggagctggcctgcacggtggtggagctcccgtacaccagcaacgacagcgcg 123020684
Query: 940 ctcttcatcctccctgacgatggcaggatggcggccgtggaagccaagctgctcccggag 999
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123020683 ctcttcatcctccctgacgatggcaggatggcggccgtggaagccaagctgctcccggag 123020624
Query: 1000 acgctgaggaggtggagagactccctgcagcccag 1034
|||||||||||||||||||||||||||||||||||
Sbjct: 123020623 acgctgaggaggtggagagactccctgcagcccag 123020589
Score = 519 bits (262), Expect = e-144
Identities = 307/321 (95%), Gaps = 1/321 (0%)
Strand = Plus / Minus
Query: 1184 aggtgatccacaaggcggtgcttgatgtgggcgaggagggcacagaagcagctgctgcca 1243
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 123016662 aggtgatccacaaggcggtgcttgatgtgggcgaggagggcacggaagcagctgctgcca 123016603
Query: 1244 ctggaattgcaatgatgacctcgaccctctacagcctcactgttagtttttccagtccct 1303
||||||||| ||||||||||| |||||| | ||||||||||||| ||| ||||| ||||
Sbjct: 123016602 ctggaattgagatgatgacctcaaccctccagagcctcactgttattttctccaggccct 123016543
Query: 1304 ttctgttcgccgtaatcgacaaagacactggcactgtcctctttttgggcaaagtcgctg 1363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123016542 ttctgttcgccgtaatcgacaaagacactggcactgtcctctttttgggcaaagtcgctg 123016483
Query: 1364 accccagccctgcctagagctcccttgctcgtggctggttcctctcnaccaggagctgag 1423
||||||| |||||||||||||||||||||||||||||||||||||| | ||||||||||
Sbjct: 123016482 accccagtcctgcctagagctcccttgctcgtggctggttcctctcaccaaggagctgag 123016423
Query: 1424 tgccctggtccctgggggcaggctgggccctgtgccccaagaaaa-ccccatcctggcac 1482
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 123016422 tgccctggtccctgggggcaggctgggccctgtgccccaagaaaatccccatcctggcac 123016363
Query: 1483 tgcctgctcacccttgggaag 1503
|||||||||||||||||||||
Sbjct: 123016362 tgcctgctcacccttgggaag 123016342
Score = 476 bits (240), Expect = e-131
Identities = 291/308 (94%)
Strand = Plus / Plus
Query: 269 ccagcaacaccgacttcgccttcagcctctacaagcagctggtttctttagaccccagta 328
|||||||||||||||||||||||||||||||||||||||||| | || | |||
Sbjct: 123036379 ccagcaacaccgacttcgccttcagcctctacaagcagctggctctggccgaacgcagag 123036438
Query: 329 agaacgtcatcttctccccgctgagcgtctccatagccttggccttcctgtctctggggg 388
| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123036439 aaaatgtcatcttctccccgctgagcgtctccatagccttggccttcctgtctctggggg 123036498
Query: 389 cccgaggccccaccctgacagagctcctggaaggcctcaagttcaacctcacaaagaccc 448
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 123036499 cccgaggccccaccctgatagagctcctggaaggcctcaagttcaacctcacaaagaccc 123036558
Query: 449 ccgaggcagaaatccaccagggcttccagcacctcctgcaggccctcagccaacccagca 508
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123036559 ccgaggcagaaatccaccagggcttccagcacctcctgcaggccctcagccaacccagca 123036618
Query: 509 acctgctgcagctgaacgtgggcaacgccatgttcgtggatgagcatctgaagctgctgg 568
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 123036619 acctgctgcagctgaacgtgggcaacgccatgttcgtggatgagcggctgaagctgctgg 123036678
Query: 569 acgagttc 576
|| |||||
Sbjct: 123036679 acaagttc 123036686
Score = 335 bits (169), Expect = 4e-89
Identities = 390/461 (84%), Gaps = 2/461 (0%)
Strand = Plus / Minus
Query: 117 agagggcatgtcccccttcctggctctggggctcctggtggctgggctctgctccagcgt 176
|||||| ||||||| ||||||||||||||| |||||||||||||| ||||||||||| ||
Sbjct: 123117413 agagggaatgtccctcttcctggctctgggcctcctggtggctggactctgctccagggt 123117354
Query: 177 ccactgcgtccccgaaagcaaacctgacccagagaatgggaccccgaaggaccagcacag 236
|||||||||||| | | |||| | || ||| || ||||| |||||||||| ||
Sbjct: 123117353 ccactgcgtcccagcggatgaccctgcctcaaagattgtgaccctgaaggaccagatcaa 123117294
Query: 237 caggactcccgtggacccccacgccattgtccccagcaacaccgacttcgccttcagcct 296
| | || | | || | |||| | ||| ||||||||||||||||||||||||||||
Sbjct: 123117293 gaagctgccagcgcacaacaccgccgtcgtctccagcaacaccgacttcgccttcagcct 123117234
Query: 297 ctacaagcagctggtttctttagaccccag-taagaacgtcatcttctccccgctgagcg 355
|||||||||||||| | || || ||| | |||| ||||||||||||||||||||||
Sbjct: 123117233 ctacaagcagctggct-ctgacgaacccgcatgagaatgtcatcttctccccgctgagcg 123117175
Query: 356 tctccatagccttggccttcctgtctctgggggcccgaggccccaccctgacagagctcc 415
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123117174 tctccatggccttggccttcctgtctctgggggcccgaggccccaccctgacagagctcc 123117115
Query: 416 tggaaggcctcaagttcaacctcacaaagacccccgaggcagaaatccaccagggcttcc 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123117114 tggaaggcctcaagttcaacctcacaaagacccccgaggcagaaatccaccagggcttcc 123117055
Query: 476 agcacctcctgcaggccctcagccaacccagcaacctgctgcagctgaacgtgggcaacg 535
||||||||||| | ||| | | || |||||||||||||||| ||||||| |
Sbjct: 123117054 agcacctcctgagcacgctcgacaggtcgagtaacctgctgcagctgaggttgggcaatg 123116995
Query: 536 ccatgttcgtggatgagcatctgaagctgctggacgagttc 576
|||||||| | |||||||| ||| ||||||||||| |||||
Sbjct: 123116994 ccatgttcattgatgagcagctggagctgctggacaagttc 123116954
Score = 333 bits (168), Expect = 2e-88
Identities = 398/471 (84%), Gaps = 4/471 (0%)
Strand = Plus / Plus
Query: 108 catgaaggcagagggcatgtcccccttcctggctctggggctcctggtggctgggctctg 167
||||| ||||||||| ||||||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 122933478 catgagggcagagggaatgtccctcttcctggctctgggcctcctggtggctgggctctg 122933537
Query: 168 ctccagcgtccactgcgtccccgaaagcaaacctgacccagagaatgggaccccgaagga 227
|||||| |||||||||||||| | | | || | || ||| || ||||| ||||||
Sbjct: 122933538 ctccagggtccactgcgtcccagcggatgaccttgcctcaaagattgtgaccctgaagga 122933597
Query: 228 ccagcacagcaggactcccgtggacccccacgccattgtccccagcaacaccgacttcgc 287
|||| || | | || ||| || | |||| | ||| |||||||||||||||||||
Sbjct: 122933598 ccagatcaagaagctgccagtgcacaacaccgccgtggtctccagcaacaccgacttcgc 122933657
Query: 288 cttcagcctctacaagcagctggtttctttagaccc--cagtaagaacgtcatcttctcc 345
|||||||||||||||||||||| | ||| || || || |||||| |||||||||||
Sbjct: 122933658 cttcagcctctacaagcagctg-tctctgacgaaccgtca-taagaatatcatcttctcc 122933715
Query: 346 ccgctgagcgtctccatagccttggccttcctgtctctgggggcccgaggccccaccctg 405
||||||||||||||||| ||||||||||||||||| |||| ||||||||||||||||||
Sbjct: 122933716 ccgctgagcgtctccatggccttggccttcctgtccttgggagcccgaggccccaccctg 122933775
Query: 406 acagagctcctggaaggcctcaagttcaacctcacaaagacccccgaggcagaaatccac 465
||||||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||
Sbjct: 122933776 acagagctcctggaaggcctcaagttcaatgtcacagagacccctgaggcagaaatccac 122933835
Query: 466 cagggcttccagcacctcctgcaggccctcagccaacccagcaacctgctgcagctgaac 525
||||||||||||||||||||| | | |||| | || |||||||||||||||||||
Sbjct: 122933836 cagggcttccagcacctcctgaggacgctcaacaggccgagcaacctgctgcagctgagg 122933895
Query: 526 gtgggcaacgccatgttcgtggatgagcatctgaagctgctggacgagttc 576
||||||||||||||||| | |||||||| ||| ||||||||||| |||||
Sbjct: 122933896 ttgggcaacgccatgttcattgatgagcagctggagctgctggacaagttc 122933946
Score = 311 bits (157), Expect = 6e-82
Identities = 157/157 (100%)
Strand = Plus / Minus
Query: 1033 agacggatagatgccctctacctgccacggttttctgtctccggcgactatcaactgaag 1092
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123017895 agacggatagatgccctctacctgccacggttttctgtctccggcgactatcaactgaag 123017836
Query: 1093 gacacccttaagcagctgggcattcagaaagtgttcacccacgaggctgacctgtcagga 1152
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123017835 gacacccttaagcagctgggcattcagaaagtgttcacccacgaggctgacctgtcagga 123017776
Query: 1153 gtcacaggggacaacaaactgggggtttccaaggtga 1189
|||||||||||||||||||||||||||||||||||||
Sbjct: 123017775 gtcacaggggacaacaaactgggggtttccaaggtga 123017739
Score = 307 bits (155), Expect = 9e-81
Identities = 209/227 (92%)
Strand = Plus / Minus
Query: 808 ttccaagtgagcaagaacaggacagtgaaggtgcccatgatgagccttcgaggcctggaa 867
||||| ||||||||||||||||| |||| ||||||||||||| || || | | ||||
Sbjct: 123115240 ttccacgtgagcaagaacaggacggtgagggtgcccatgatgggcattagggccctgacc 123115181
Query: 868 acaccttacttccgggacgaggagctggcctgcacggtggtggagctcccgtacaccagc 927
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123115180 gtgccttacttccgggacgaggagctggcctgcacggtggtggagctcccgtacaccagc 123115121
Query: 928 aacgacagcgcgctcttcatcctccctgacgatggcaggatggcggccgtggaagccaag 987
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 123115120 aacgacagcgcgctcttcatcctccctgacgacggcaggatggcggccgtggaagccaag 123115061
Query: 988 ctgctcccggagacgctgaggaggtggagagactccctgcagcccag 1034
|||||||| ||||| ||||||||||||||||||| ||||||||||||
Sbjct: 123115060 ctgctccctgagacactgaggaggtggagagacttcctgcagcccag 123115014
Score = 305 bits (154), Expect = 4e-80
Identities = 207/222 (93%), Gaps = 2/222 (0%)
Strand = Plus / Plus
Query: 808 ttccaagtgagcaagaacaggacagtgaaggtgcccatgatgagccttcgaggcctggaa 867
||||| ||||||||||||||||| |||| ||||||||||||| || || |||| |||
Sbjct: 122966038 ttccacgtgagcaagaacaggacggtgagggtgcccatgatgggcatttcgggcc-ggac 122966096
Query: 868 aca-ccttacttccgggacgaggagctggcctgcacggtggtggagctcccgtacaccag 926
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122966097 cctgccttacttccgggacgaggagctggcctgcacggtggtggagctcccgtacaccag 122966156
Query: 927 caacgacagcgcgctcttcatcctccctgacgatggcaggatggcggccgtggaagccaa 986
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
Sbjct: 122966157 caacgacagcgcgctcttcatcctccctgacgacggcaggatggcggccgtggaagccca 122966216
Query: 987 gctgctcccggagacgctgaggaggtggagagactccctgca 1028
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122966217 gctgctcccggagacgctgaggaggtggagagactccctgca 122966258
Score = 295 bits (149), Expect = 4e-77
Identities = 155/157 (98%)
Strand = Plus / Plus
Query: 1033 agacggatagatgccctctacctgccacggttttctgtctccggcgactatcaactgaag 1092
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||
Sbjct: 123001110 agacggatagatgccctctacctgccacggttttccgtctccggcgactatcaactggag 123001169
Query: 1093 gacacccttaagcagctgggcattcagaaagtgttcacccacgaggctgacctgtcagga 1152
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123001170 gacacccttaagcagctgggcattcagaaagtgttcacccacgaggctgacctgtcagga 123001229
Query: 1153 gtcacaggggacaacaaactgggggtttccaaggtga 1189
|||||||||||||||||||||||||||||||||||||
Sbjct: 123001230 gtcacaggggacaacaaactgggggtttccaaggtga 123001266
Score = 287 bits (145), Expect = 9e-75
Identities = 157/161 (97%)
Strand = Plus / Minus
Query: 874 tacttccgggacgaggagctggcctgcacggtggtggagctcccgtacaccagcaacgac 933
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123099052 tacttccgggacgaggagctggcctgcacggtggtggagctcccgtacaccagcaacgac 123098993
Query: 934 agcgcgctcttcatcctccctgacgatggcaggatggcggccgtggaagccaagctgctc 993
||| |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 123098992 agcacgctcttcatcctccctgacgacggcaggatggcggccgtggaagccaatctgctc 123098933
Query: 994 ccggagacgctgaggaggtggagagactccctgcagcccag 1034
||||||| |||||||||||||||||||||||||||||||||
Sbjct: 123098932 ccggagatgctgaggaggtggagagactccctgcagcccag 123098892
Score = 145 bits (73), Expect = 8e-32
Identities = 86/89 (96%), Gaps = 1/89 (1%)
Strand = Plus / Plus
Query: 871 ccttacttccgggacgaggagctggcctgcacggtggtggagctcccgtacaccagcaac 930
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123038647 ccttacttccgggaacaggagctggcctgcacggtggtggagctcccgtacaccagcaac 123038706
Query: 931 gacagcgcgctcttcatcctccctgacga 959
|||||||||||| ||||||||||||||||
Sbjct: 123038707 gacagcgcgctc-tcatcctccctgacga 123038734
Score = 121 bits (61), Expect = 1e-24
Identities = 76/81 (93%)
Strand = Plus / Plus
Query: 108 catgaaggcagagggcatgtcccccttcctggctctggggctcctggtggctgggctctg 167
||||| ||| ||||||||||||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 122963671 catgagggcggagggcatgtccctcttcctggctctgggcctcctggtggctgggctctg 122963730
Query: 168 ctccagcgtccactgcgtccc 188
|||||| ||||||||||||||
Sbjct: 122963731 ctccagggtccactgcgtccc 122963751
Score = 121 bits (61), Expect = 1e-24
Identities = 76/81 (93%)
Strand = Plus / Plus
Query: 108 catgaaggcagagggcatgtcccccttcctggctctggggctcctggtggctgggctctg 167
||||| ||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 123036218 catgagggcggagggaatgtccctcttcctggctctggggctcctggtggctgggctctg 123036277
Query: 168 ctccagcgtccactgcgtccc 188
|||||| ||||||||||||||
Sbjct: 123036278 ctccagggtccactgcgtccc 123036298
Score = 119 bits (60), Expect = 5e-24
Identities = 60/60 (100%)
Strand = Plus / Minus
Query: 48 agcattgcgggcaggcggcggctctgggtccactcagcgcatcccgctctgcgaggcagg 107
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122953936 agcattgcgggcaggcggcggctctgggtccactcagcgcatcccgctctgcgaggcagg 122953877
Score = 119 bits (60), Expect = 5e-24
Identities = 60/60 (100%)
Strand = Plus / Minus
Query: 48 agcattgcgggcaggcggcggctctgggtccactcagcgcatcccgctctgcgaggcagg 107
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123103334 agcattgcgggcaggcggcggctctgggtccactcagcgcatcccgctctgcgaggcagg 123103275
Score = 113 bits (57), Expect = 3e-22
Identities = 75/81 (92%)
Strand = Plus / Minus
Query: 108 catgaaggcagagggcatgtcccccttcctggctctggggctcctggtggctgggctctg 167
||||| ||| ||||| ||||||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 123101423 catgagggcggagggaatgtccctcttcctggctctgggcctcctggtggctgggctctg 123101364
Query: 168 ctccagcgtccactgcgtccc 188
|||||| ||||||||||||||
Sbjct: 123101363 ctccagggtccactgcgtccc 123101343
Score = 111 bits (56), Expect = 1e-21
Identities = 59/60 (98%)
Strand = Plus / Minus
Query: 48 agcattgcgggcaggcggcggctctgggtccactcagcgcatcccgctctgcgaggcagg 107
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 123024977 agcattgcgggcaggcggcggctctgggtccactcagcacatcccgctctgcgaggcagg 123024918
Score = 111 bits (56), Expect = 1e-21
Identities = 59/60 (98%)
Strand = Plus / Minus
Query: 48 agcattgcgggcaggcggcggctctgggtccactcagcgcatcccgctctgcgaggcagg 107
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 123119625 agcattgcgggcaggcggcggctctgggtccactcagcgcatcctgctctgcgaggcagg 123119566
Score = 103 bits (52), Expect = 3e-19
Identities = 58/60 (96%)
Strand = Plus / Plus
Query: 48 agcattgcgggcaggcggcggctctgggtccactcagcgcatcccgctctgcgaggcagg 107
||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 122961778 agcattgcgggcaggtggtggctctgggtccactcagcgcatcccgctctgcgaggcagg 122961837
Score = 85.7 bits (43), Expect = 6e-14
Identities = 106/127 (83%)
Strand = Plus / Plus
Query: 1033 agacggatagatgccctctacctgccacggttttctgtctccggcgactatcaactgaag 1092
||||||||| ||||||| |||||||||||||||| |||||||| |||||| ||| |
Sbjct: 122968307 agacggataactgccctccacctgccacggttttccgtctccggggactatacgctgcat 122968366
Query: 1093 gacacccttaagcagctgggcattcagaaagtgttcacccacgaggctgacctgtcagga 1152
|||| |||| || ||||||||| ||||||| |||| ||| |||||||||||||||||
Sbjct: 122968367 gacatccttccccacctgggcattaagaaagtcttcagccatcaggctgacctgtcagga 122968426
Query: 1153 gtcacag 1159
||||||
Sbjct: 122968427 atcacag 122968433
Score = 83.8 bits (42), Expect = 3e-13
Identities = 108/130 (83%)
Strand = Plus / Plus
Query: 1030 cccagacggatagatgccctctacctgccacggttttctgtctccggcgactatcaactg 1089
||||| |||||||| |||||| |||||||||||||||| ||||| |||||||| |||||
Sbjct: 122936825 cccaggcggatagaagccctccacctgccacggttttccatctccagcgactataaactg 122936884
Query: 1090 aaggacacccttaagcagctgggcattcagaaagtgttcacccacgaggctgacctgtca 1149
|||| | |||| | ||||||||| |||||| | |||| | |||||||||||||||
Sbjct: 122936885 caggagatccttccccggctgggcatccagaaaatcttcagtgaggaggctgacctgtca 122936944
Query: 1150 ggagtcacag 1159
||| ||||||
Sbjct: 122936945 ggaatcacag 122936954
Score = 73.8 bits (37), Expect = 2e-10
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 1030 cccagacggatagatgccctctacctgccacggttttctgtctccggcgactatcaactg 1089
||||| ||||||||||||||| |||||||||||||||| ||||| |||||||| |||||
Sbjct: 123096198 cccaggcggatagatgccctccacctgccacggttttccatctccagcgactataaactg 123096139
Query: 1090 aagga 1094
||||
Sbjct: 123096138 gagga 123096134
Score = 61.9 bits (31), Expect = 9e-07
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 1184 aggtgatccacaaggcggtgcttgatgtgggcgaggagggcacagaagcagctgctgcca 1243
||||| |||||| || |||||||| |||| |||||||||||| |||| |||||||||||
Sbjct: 122969457 aggtggtccacagagctgtgcttgacgtggacgaggagggcacggaaggagctgctgcca 122969516
Query: 1244 ctggaat 1250
| |||||
Sbjct: 122969517 cgggaat 122969523
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 38,808,768
Number of extensions: 353
Number of successful extensions: 353
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 349
Number of HSP's successfully gapped: 38
Length of query: 1503
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 1482
Effective length of database: 2,808,413,156
Effective search space: 4162068297192
Effective search space used: 4162068297192
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)