Animal-Genome cDNA 20110601C-000822


Search to RefSeqBP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-000822
         (999 letters)

Database: RefSeq49_BP.fasta 
           33,088 sequences; 17,681,374 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001075181.1| SERPINA3-8 [Bos taurus].                          320   5e-96
Alignment   gi|NP_001139774.1| serpin A3-6 [Bos taurus].                         312   3e-94
Alignment   gi|NP_001075213.1| serpin A3-5 [Bos taurus].                         308   4e-94
Alignment   gi|XP_001787316.2| PREDICTED: endopin 2C-like [Bos taurus].          305   8e-93
Alignment   gi|XP_002696874.1| PREDICTED: endopin 2C-like [Bos taurus].          305   1e-92
Alignment   gi|NP_001139773.1| serpin A3-2 [Bos taurus].                         303   3e-92
Alignment   gi|NP_777193.2| serpin A3-1 precursor [Bos taurus].                  302   5e-92
Alignment   gi|XP_001252647.3| PREDICTED: endopin 2B-like [Bos taurus].          298   2e-90
Alignment   gi|NP_001033293.1| serpin A3-3 [Bos taurus].                         299   3e-90
Alignment   gi|XP_001252670.1| PREDICTED: endopin 1b-like isoform 1 [Bos ta...   300   2e-89

>ref|NP_001075181.1| SERPINA3-8 [Bos taurus].
          Length = 418

 Score =  320 bits (821), Expect(2) = 5e-96
 Identities = 168/271 (61%), Positives = 199/271 (73%)
 Frame = +2

Query: 62  MRAEGMSXXXXXXXXXXXXCSRVHCLPADDLASKTVTLKGQIKKLPAHNTAVVSSNTDFA 241
           MRAE MS            CSRVHCLP      + V  + + K       ++ SSNTDFA
Sbjct: 1   MRAERMSPLLALGLLVSGLCSRVHCLP------ENVAPEERHKGTSVDGHSLASSNTDFA 54

Query: 242 FSLYKQLVSLDPSKNVIFSPLSVSIALAFLSLGARGPTLIELLEGLKFNLTKTPEAEIHQ 421
           FSLYKQL   +P+KNVIFSPLS+SIALAFLSLGARGPT+ E+LEGLKFNLT+TPE EIHQ
Sbjct: 55  FSLYKQLALKNPNKNVIFSPLSISIALAFLSLGARGPTVTEILEGLKFNLTETPEREIHQ 114

Query: 422 GFQHLLRALSQPSNLLQLNVGNAMFVDERLKLLDKFVQDAHELYFSEAFSISFKDSDAAI 601
           GFQHLL+ LS+PSN LQL+VGN MFV E+LKLLDKF +DA  LY SEAFS +FKD + A 
Sbjct: 115 GFQHLLQMLSRPSNELQLSVGNTMFVQEQLKLLDKFREDALALYTSEAFSTNFKDPETAK 174

Query: 602 EFINNYVKNKTKGKIVDLFKQLSPDTVLVLVNCIYFKAKWKMPFHPSFTTEADFHVSKNR 781
             IN+YVKNKT+GKIVDLFK L P T ++LVN IYFKA+W+ PF P  T ++ FHVSKN+
Sbjct: 175 SLINDYVKNKTRGKIVDLFKDLDPLTKVILVNYIYFKAQWRTPFDPKQTYKSQFHVSKNK 234

Query: 782 TVRVPMMGITGRIVPYCMDQELACSVVELPY 874
           TV VPMM I   + PY  D+EL C++VEL Y
Sbjct: 235 TVEVPMMSIGDLVTPYFRDEELDCTLVELTY 265



 Score = 50.1 bits (118), Expect(2) = 5e-96
 Identities = 22/38 (57%), Positives = 29/38 (76%)
 Frame = +1

Query: 880 HDCTLFILSDDGMMEDVGAKLLPDTLMRWRDSLQPRRI 993
           +D  LFIL D+G M+D+ AKL+P+ L RWR+SL PR I
Sbjct: 268 NDSALFILPDEGKMQDLEAKLIPEMLTRWRESLYPRGI 305


>ref|NP_001139774.1| serpin A3-6 [Bos taurus].
          Length = 414

 Score =  312 bits (799), Expect(2) = 3e-94
 Identities = 165/271 (60%), Positives = 195/271 (71%)
 Frame = +2

Query: 62  MRAEGMSXXXXXXXXXXXXCSRVHCLPADDLASKTVTLKGQIKKLPAHNTAVVSSNTDFA 241
           MR E +S            CSRVHCLP      + VT + Q K       ++ SSNTDFA
Sbjct: 1   MRTERVSPLLALGILVAGLCSRVHCLP------ENVTPEEQHKVTSVDGHSLASSNTDFA 54

Query: 242 FSLYKQLVSLDPSKNVIFSPLSVSIALAFLSLGARGPTLIELLEGLKFNLTKTPEAEIHQ 421
           FSLYKQL   DP+KNVIFSPLSVSIALAFLSLGA GPT+ E+LEGLKFNLT+TPE EIHQ
Sbjct: 55  FSLYKQLALKDPNKNVIFSPLSVSIALAFLSLGAHGPTVTEILEGLKFNLTETPETEIHQ 114

Query: 422 GFQHLLRALSQPSNLLQLNVGNAMFVDERLKLLDKFVQDAHELYFSEAFSISFKDSDAAI 601
           GFQHLL+  +QPSN LQL+VGNA+FV E LKLLDKF++DA  LY SEAF  +F+D +AA 
Sbjct: 115 GFQHLLQTFNQPSNQLQLSVGNAIFVQEELKLLDKFIEDARVLYSSEAFPTNFRDPEAAK 174

Query: 602 EFINNYVKNKTKGKIVDLFKQLSPDTVLVLVNCIYFKAKWKMPFHPSFTTEADFHVSKNR 781
             IN+YVKNKT+GKI +LFK LSP T LVLVN +YFKA+WK  F P  T + +FHVS N+
Sbjct: 175 SLINDYVKNKTQGKIEELFKDLSPRTELVLVNYVYFKAQWKTRFDPKHTEKTEFHVSDNK 234

Query: 782 TVRVPMMGITGRIVPYCMDQELACSVVELPY 874
           TV VPMM +     PY  D+EL C++VEL Y
Sbjct: 235 TVEVPMMTLDLE-TPYFRDEELGCTLVELTY 264



 Score = 52.4 bits (124), Expect(2) = 3e-94
 Identities = 24/38 (63%), Positives = 29/38 (76%)
 Frame = +1

Query: 880 HDCTLFILSDDGMMEDVGAKLLPDTLMRWRDSLQPRRI 993
           +D  LFIL D G M+D+ AKL P+ L RWR+SLQPRRI
Sbjct: 267 NDSALFILPDKGKMQDLEAKLTPEMLTRWRNSLQPRRI 304


>ref|NP_001075213.1| serpin A3-5 [Bos taurus].
          Length = 411

 Score =  308 bits (789), Expect(2) = 4e-94
 Identities = 162/249 (65%), Positives = 194/249 (77%)
 Frame = +2

Query: 128 VHCLPADDLASKTVTLKGQIKKLPAHNTAVVSSNTDFAFSLYKQLVSLDPSKNVIFSPLS 307
           VHCLP      + V +K Q +++ +H  A  SSNTDFAFSLYKQL   +P+KNV+FSPLS
Sbjct: 22  VHCLP------ENVVVKDQRRRVDSHTLA--SSNTDFAFSLYKQLALKNPNKNVMFSPLS 73

Query: 308 VSIALAFLSLGARGPTLIELLEGLKFNLTKTPEAEIHQGFQHLLRALSQPSNLLQLNVGN 487
           VS+ALAFLSLGARGPTL E+LEGLKFNLT+  E +IHQGFQHLL+AL++PSN LQL+VGN
Sbjct: 74  VSMALAFLSLGARGPTLTEILEGLKFNLTEIQETQIHQGFQHLLQALNRPSNQLQLSVGN 133

Query: 488 AMFVDERLKLLDKFVQDAHELYFSEAFSISFKDSDAAIEFINNYVKNKTKGKIVDLFKQL 667
           AMFV E LKLLDKF++DA  LY SEAF  +F+DS+AA   IN+YVKNKT+GKI +LFK L
Sbjct: 134 AMFVQEELKLLDKFIEDARVLYSSEAFPTNFRDSEAARSLINDYVKNKTQGKIEELFKYL 193

Query: 668 SPDTVLVLVNCIYFKAKWKMPFHPSFTTEADFHVSKNRTVRVPMMGITGRIVPYCMDQEL 847
           SP TVLVLVN IYFKA+WK  F P  T +A+FHVSKN+TV VPMM +     PY  D+EL
Sbjct: 194 SPRTVLVLVNYIYFKAQWKTRFDPKHTEQAEFHVSKNKTVEVPMMTLDLE-TPYFRDKEL 252

Query: 848 ACSVVELPY 874
            C +VEL Y
Sbjct: 253 GCMLVELTY 261



 Score = 55.8 bits (133), Expect(2) = 4e-94
 Identities = 25/38 (65%), Positives = 31/38 (81%)
 Frame = +1

Query: 880 HDCTLFILSDDGMMEDVGAKLLPDTLMRWRDSLQPRRI 993
           +D  LFIL D+G M+D+ AKL P+TL RWR+SLQPRRI
Sbjct: 264 NDSALFILPDEGKMQDLEAKLTPETLTRWRNSLQPRRI 301


>ref|XP_001787316.2| PREDICTED: endopin 2C-like [Bos taurus].
          Length = 411

 Score =  305 bits (782), Expect(2) = 8e-93
 Identities = 162/271 (59%), Positives = 193/271 (71%)
 Frame = +2

Query: 62  MRAEGMSXXXXXXXXXXXXCSRVHCLPADDLASKTVTLKGQIKKLPAHNTAVVSSNTDFA 241
           MR E MS            CSRVHCLP      + VT + Q K       ++ SSNTDFA
Sbjct: 1   MRTERMSPLLALGLLVSGLCSRVHCLP------ENVTPEEQHKVTSVDGHSLASSNTDFA 54

Query: 242 FSLYKQLVSLDPSKNVIFSPLSVSIALAFLSLGARGPTLIELLEGLKFNLTKTPEAEIHQ 421
           FSLYKQL   DP+KNVIFSPLS+SIALAFLSLGA GPT+ E+LEGLKFNLT+TPE EIHQ
Sbjct: 55  FSLYKQLALKDPNKNVIFSPLSISIALAFLSLGAHGPTVTEILEGLKFNLTETPETEIHQ 114

Query: 422 GFQHLLRALSQPSNLLQLNVGNAMFVDERLKLLDKFVQDAHELYFSEAFSISFKDSDAAI 601
           GFQHLL+  +QPSN LQL+VGNA+FV E LKLLDKF +DA   Y SE  SI+FKDS+AA+
Sbjct: 115 GFQHLLQTFNQPSNQLQLSVGNAIFVPEELKLLDKFRKDAEAFYASEVLSINFKDSEAAV 174

Query: 602 EFINNYVKNKTKGKIVDLFKQLSPDTVLVLVNCIYFKAKWKMPFHPSFTTEADFHVSKNR 781
           + IN YVKNKT GKI  L   L   T L+L+N I+FKA+WK PF+P+ T E++FHVSKN 
Sbjct: 175 KLINEYVKNKTHGKIEKLLNDLDVLTNLILLNYIFFKAQWKTPFNPNHTYESEFHVSKNE 234

Query: 782 TVRVPMMGITGRIVPYCMDQELACSVVELPY 874
            V+VPMM +     PY  D+EL C++VEL Y
Sbjct: 235 RVKVPMMTLRLE-TPYFRDEELGCTLVELTY 264



 Score = 54.3 bits (129), Expect(2) = 8e-93
 Identities = 24/38 (63%), Positives = 31/38 (81%)
 Frame = +1

Query: 880 HDCTLFILSDDGMMEDVGAKLLPDTLMRWRDSLQPRRI 993
           +D  LFIL D+G M+D+ AKL P+TL RWR+SLQPR+I
Sbjct: 267 NDSALFILPDEGKMQDLEAKLTPETLTRWRNSLQPRQI 304


>ref|XP_002696874.1| PREDICTED: endopin 2C-like [Bos taurus].
          Length = 417

 Score =  305 bits (782), Expect(2) = 1e-92
 Identities = 162/271 (59%), Positives = 193/271 (71%)
 Frame = +2

Query: 62  MRAEGMSXXXXXXXXXXXXCSRVHCLPADDLASKTVTLKGQIKKLPAHNTAVVSSNTDFA 241
           MR E MS            CSRVHCLP      + VT + Q K       ++ SSNTDFA
Sbjct: 1   MRTERMSPLLALGLLVSGLCSRVHCLP------ENVTPEEQHKVTSVDGHSLASSNTDFA 54

Query: 242 FSLYKQLVSLDPSKNVIFSPLSVSIALAFLSLGARGPTLIELLEGLKFNLTKTPEAEIHQ 421
           FSLYKQL   DP+KNVIFSPLS+SIALAFLSLGA GPT+ E+LEGLKFNLT+TPE EIHQ
Sbjct: 55  FSLYKQLALKDPNKNVIFSPLSISIALAFLSLGAHGPTVTEILEGLKFNLTETPETEIHQ 114

Query: 422 GFQHLLRALSQPSNLLQLNVGNAMFVDERLKLLDKFVQDAHELYFSEAFSISFKDSDAAI 601
           GFQHLL+  +QPSN LQL+VGNA+FV E LKLLDKF +DA   Y SE  SI+FKDS+AA+
Sbjct: 115 GFQHLLQTFNQPSNQLQLSVGNAIFVPEELKLLDKFRKDAEAFYASEVLSINFKDSEAAV 174

Query: 602 EFINNYVKNKTKGKIVDLFKQLSPDTVLVLVNCIYFKAKWKMPFHPSFTTEADFHVSKNR 781
           + IN YVKNKT GKI  L   L   T L+L+N I+FKA+WK PF+P+ T E++FHVSKN 
Sbjct: 175 KLINEYVKNKTHGKIEKLLNDLDVLTNLILLNYIFFKAQWKTPFNPNHTYESEFHVSKNE 234

Query: 782 TVRVPMMGITGRIVPYCMDQELACSVVELPY 874
            V+VPMM +     PY  D+EL C++VEL Y
Sbjct: 235 RVKVPMMTLRLE-TPYFRDEELGCTLVELTY 264



 Score = 53.9 bits (128), Expect(2) = 1e-92
 Identities = 24/38 (63%), Positives = 30/38 (78%)
 Frame = +1

Query: 880 HDCTLFILSDDGMMEDVGAKLLPDTLMRWRDSLQPRRI 993
           +D  LFIL D+G M+D+ AKL P+TL RWR+SLQPR I
Sbjct: 267 NDSALFILPDEGKMQDLEAKLTPETLTRWRNSLQPRHI 304


>ref|NP_001139773.1| serpin A3-2 [Bos taurus].
          Length = 411

 Score =  303 bits (775), Expect(2) = 3e-92
 Identities = 161/249 (64%), Positives = 189/249 (75%)
 Frame = +2

Query: 128 VHCLPADDLASKTVTLKGQIKKLPAHNTAVVSSNTDFAFSLYKQLVSLDPSKNVIFSPLS 307
           VHCLP      + V +K Q +++  H  A  SSNTDFAFSLYKQL   +P+KNVI SPLS
Sbjct: 22  VHCLP------ENVVVKDQHRRVDGHTLA--SSNTDFAFSLYKQLALKNPNKNVILSPLS 73

Query: 308 VSIALAFLSLGARGPTLIELLEGLKFNLTKTPEAEIHQGFQHLLRALSQPSNLLQLNVGN 487
           VSIALAFLSLGARG TL E+LEGLKFNLT+  E EIH  FQHLL+AL+QPSN LQL+VGN
Sbjct: 74  VSIALAFLSLGARGSTLTEILEGLKFNLTEIQEKEIHHSFQHLLQALNQPSNQLQLSVGN 133

Query: 488 AMFVDERLKLLDKFVQDAHELYFSEAFSISFKDSDAAIEFINNYVKNKTKGKIVDLFKQL 667
           AMFV E LKLLDKF++DA  LY SEAF  +F+DS+AA   IN+YVKNKT+GKI +LFK L
Sbjct: 134 AMFVQEELKLLDKFIEDAQVLYSSEAFPTNFRDSEAARSLINDYVKNKTQGKIEELFKYL 193

Query: 668 SPDTVLVLVNCIYFKAKWKMPFHPSFTTEADFHVSKNRTVRVPMMGITGRIVPYCMDQEL 847
           SP T LVLVN IYFKA+WK PF P  T +A+FHVS N+TV VPMM +     PY  D+EL
Sbjct: 194 SPRTELVLVNYIYFKAQWKTPFDPKHTEQAEFHVSDNKTVEVPMMTLDLE-TPYFRDEEL 252

Query: 848 ACSVVELPY 874
            C++VEL Y
Sbjct: 253 GCTLVELTY 261



 Score = 55.1 bits (131), Expect(2) = 3e-92
 Identities = 25/38 (65%), Positives = 30/38 (78%)
 Frame = +1

Query: 880 HDCTLFILSDDGMMEDVGAKLLPDTLMRWRDSLQPRRI 993
           +D  LFIL D+G M D+ AKL P+TL RWR+SLQPRRI
Sbjct: 264 NDSALFILPDEGKMRDLEAKLTPETLTRWRNSLQPRRI 301


>ref|NP_777193.2| serpin A3-1 precursor [Bos taurus].
          Length = 411

 Score =  302 bits (773), Expect(2) = 5e-92
 Identities = 161/249 (64%), Positives = 189/249 (75%)
 Frame = +2

Query: 128 VHCLPADDLASKTVTLKGQIKKLPAHNTAVVSSNTDFAFSLYKQLVSLDPSKNVIFSPLS 307
           VHCLP      + V +K Q +++  H  A  SSNTDFAFSLYKQL   +P+KNVI SPLS
Sbjct: 22  VHCLP------ENVVVKDQHRRVDGHTLA--SSNTDFAFSLYKQLPLKNPNKNVILSPLS 73

Query: 308 VSIALAFLSLGARGPTLIELLEGLKFNLTKTPEAEIHQGFQHLLRALSQPSNLLQLNVGN 487
           VSIALAFLSLGARG TL E+LEGLKFNLT+  E EIH  FQHLL+AL+QPSN LQL+VGN
Sbjct: 74  VSIALAFLSLGARGSTLTEILEGLKFNLTEIQEKEIHHSFQHLLQALNQPSNQLQLSVGN 133

Query: 488 AMFVDERLKLLDKFVQDAHELYFSEAFSISFKDSDAAIEFINNYVKNKTKGKIVDLFKQL 667
           AMFV E LKLLDKF++DA  LY SEAF  +F+DS+AA   IN+YVKNKT+GKI +LFK L
Sbjct: 134 AMFVQEELKLLDKFIEDAQVLYSSEAFPTNFRDSEAARSLINDYVKNKTQGKIEELFKYL 193

Query: 668 SPDTVLVLVNCIYFKAKWKMPFHPSFTTEADFHVSKNRTVRVPMMGITGRIVPYCMDQEL 847
           SP T LVLVN IYFKA+WK PF P  T +A+FHVS N+TV VPMM +     PY  D+EL
Sbjct: 194 SPRTELVLVNYIYFKAQWKTPFDPKHTEQAEFHVSDNKTVEVPMMTLDLE-TPYFRDEEL 252

Query: 848 ACSVVELPY 874
            C++VEL Y
Sbjct: 253 GCTLVELTY 261



 Score = 55.1 bits (131), Expect(2) = 5e-92
 Identities = 25/38 (65%), Positives = 30/38 (78%)
 Frame = +1

Query: 880 HDCTLFILSDDGMMEDVGAKLLPDTLMRWRDSLQPRRI 993
           +D  LFIL D+G M D+ AKL P+TL RWR+SLQPRRI
Sbjct: 264 NDSALFILPDEGKMRDLEAKLTPETLTRWRNSLQPRRI 301


>ref|XP_001252647.3| PREDICTED: endopin 2B-like [Bos taurus].
          Length = 417

 Score =  298 bits (762), Expect(2) = 2e-90
 Identities = 160/271 (59%), Positives = 190/271 (70%)
 Frame = +2

Query: 62  MRAEGMSXXXXXXXXXXXXCSRVHCLPADDLASKTVTLKGQIKKLPAHNTAVVSSNTDFA 241
           MR E MS            CSRVHCLP      + VT + Q K       ++ SSNTDFA
Sbjct: 1   MRTERMSPLLALGLLVSGFCSRVHCLP------ENVTPEEQHKGTSVDGHSLASSNTDFA 54

Query: 242 FSLYKQLVSLDPSKNVIFSPLSVSIALAFLSLGARGPTLIELLEGLKFNLTKTPEAEIHQ 421
           FSLYKQL   DP+KNVIFSPLS+SIALAFLSLGA   T+ E+LEGLKFNLT+TPE EIHQ
Sbjct: 55  FSLYKQLALKDPNKNVIFSPLSISIALAFLSLGAHDHTVTEILEGLKFNLTETPETEIHQ 114

Query: 422 GFQHLLRALSQPSNLLQLNVGNAMFVDERLKLLDKFVQDAHELYFSEAFSISFKDSDAAI 601
           GFQHLL+  +QPSN LQL+VGNAMFV E LKLLDKF +DA   Y SE  S +FKDS+AA+
Sbjct: 115 GFQHLLQTFNQPSNQLQLSVGNAMFVSEELKLLDKFRKDAEAFYASEVLSTNFKDSEAAV 174

Query: 602 EFINNYVKNKTKGKIVDLFKQLSPDTVLVLVNCIYFKAKWKMPFHPSFTTEADFHVSKNR 781
           + IN YVKNKT GKI  LF  L   T L+L+N I+FKA+WK PF+P+ T E++FHVS+N 
Sbjct: 175 KLINEYVKNKTHGKIEKLFNDLDVLTNLILLNYIFFKAQWKTPFNPNHTYESEFHVSQNE 234

Query: 782 TVRVPMMGITGRIVPYCMDQELACSVVELPY 874
            V VPMM +     PY  D+EL C++VEL Y
Sbjct: 235 RVIVPMMTLYLE-TPYFRDEELGCTLVELTY 264



 Score = 53.9 bits (128), Expect(2) = 2e-90
 Identities = 24/38 (63%), Positives = 30/38 (78%)
 Frame = +1

Query: 880 HDCTLFILSDDGMMEDVGAKLLPDTLMRWRDSLQPRRI 993
           +D  LFIL D+G M+D+ AKL P+TL RWR+SLQPR I
Sbjct: 267 NDSALFILPDEGKMQDLEAKLTPETLTRWRNSLQPRHI 304


>ref|NP_001033293.1| serpin A3-3 [Bos taurus].
          Length = 411

 Score =  299 bits (765), Expect(2) = 3e-90
 Identities = 156/249 (62%), Positives = 190/249 (76%)
 Frame = +2

Query: 128 VHCLPADDLASKTVTLKGQIKKLPAHNTAVVSSNTDFAFSLYKQLVSLDPSKNVIFSPLS 307
           VHCLP      + V +K + +++  H  A  SSNTDFAFSLYKQL   +P+KNV+FSPLS
Sbjct: 22  VHCLP------ENVVVKDRHRRVDGHTLA--SSNTDFAFSLYKQLALKNPNKNVMFSPLS 73

Query: 308 VSIALAFLSLGARGPTLIELLEGLKFNLTKTPEAEIHQGFQHLLRALSQPSNLLQLNVGN 487
           VS+ALAFLSLGARGPTL E+LEGLKFNLT+  E +IHQGFQHLL+AL++P N LQL+VGN
Sbjct: 74  VSMALAFLSLGARGPTLTEILEGLKFNLTEIQETQIHQGFQHLLQALNRPRNQLQLSVGN 133

Query: 488 AMFVDERLKLLDKFVQDAHELYFSEAFSISFKDSDAAIEFINNYVKNKTKGKIVDLFKQL 667
           AMFV E LKLLDKF++DA  LY SEAF  +F+D +AA   IN+YVKNKT+GKI +LFK L
Sbjct: 134 AMFVQEELKLLDKFIEDARVLYSSEAFPTNFRDPEAAKSLINDYVKNKTQGKIEELFKDL 193

Query: 668 SPDTVLVLVNCIYFKAKWKMPFHPSFTTEADFHVSKNRTVRVPMMGITGRIVPYCMDQEL 847
           SP T LVLVN +YFKA+WK  F P  T +A+FHVS N+TV VPMM +     PY  D+EL
Sbjct: 194 SPRTELVLVNYVYFKAQWKTRFDPKHTEQAEFHVSDNKTVEVPMMTLDLE-TPYFRDEEL 252

Query: 848 ACSVVELPY 874
            C++VEL Y
Sbjct: 253 GCTLVELTY 261



 Score = 52.4 bits (124), Expect(2) = 3e-90
 Identities = 24/38 (63%), Positives = 29/38 (76%)
 Frame = +1

Query: 880 HDCTLFILSDDGMMEDVGAKLLPDTLMRWRDSLQPRRI 993
           +D  LFIL D G M+D+ AKL P+ L RWR+SLQPRRI
Sbjct: 264 NDSALFILPDKGKMQDLEAKLTPEMLTRWRNSLQPRRI 301


>ref|XP_001252670.1| PREDICTED: endopin 1b-like isoform 1 [Bos taurus].
          Length = 299

 Score =  300 bits (767), Expect(2) = 2e-89
 Identities = 158/249 (63%), Positives = 190/249 (76%)
 Frame = +2

Query: 128 VHCLPADDLASKTVTLKGQIKKLPAHNTAVVSSNTDFAFSLYKQLVSLDPSKNVIFSPLS 307
           VHCLP      + V +K + +++  H  A  SSNTDFAFSLYKQL   +P+KNV+FSPLS
Sbjct: 22  VHCLP------ENVVVKDRHRRVDGHTLA--SSNTDFAFSLYKQLALKNPNKNVMFSPLS 73

Query: 308 VSIALAFLSLGARGPTLIELLEGLKFNLTKTPEAEIHQGFQHLLRALSQPSNLLQLNVGN 487
           VS+ALAFLSLGARGPTL E+LEGLKFNLT+  E +IHQGFQHLL+AL++PSN LQL+VGN
Sbjct: 74  VSMALAFLSLGARGPTLTEILEGLKFNLTEIQETQIHQGFQHLLQALNRPSNQLQLSVGN 133

Query: 488 AMFVDERLKLLDKFVQDAHELYFSEAFSISFKDSDAAIEFINNYVKNKTKGKIVDLFKQL 667
           AMFV E LKLLDKF++DA  LY SEAF  +F D +AA   IN+YVK KT+GKI +LFK L
Sbjct: 134 AMFVQEELKLLDKFIEDARVLYSSEAFPTNFGDPEAAKSLINDYVKKKTQGKIEELFKDL 193

Query: 668 SPDTVLVLVNCIYFKAKWKMPFHPSFTTEADFHVSKNRTVRVPMMGITGRIVPYCMDQEL 847
           SP TVLVLVN IYFKA+WK  F P  T +A+FHVS N+TV VPMM +     PY  D+EL
Sbjct: 194 SPRTVLVLVNYIYFKAQWKTRFDPKHTEQAEFHVSDNKTVEVPMMTLDLE-TPYFRDEEL 252

Query: 848 ACSVVELPY 874
            C++VEL Y
Sbjct: 253 GCTLVELTY 261



 Score = 48.9 bits (115), Expect(2) = 2e-89
 Identities = 22/36 (61%), Positives = 27/36 (75%)
 Frame = +1

Query: 880 HDCTLFILSDDGMMEDVGAKLLPDTLMRWRDSLQPR 987
           +D  LFIL D G M+D+ AKL P+ L RWR+SLQPR
Sbjct: 264 NDSALFILPDKGKMQDLEAKLTPEMLTRWRNSLQPR 299


  Database: RefSeq49_BP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 17,681,374
  Number of sequences in database:  33,088
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 39,322,579
Number of extensions: 1142739
Number of successful extensions: 6987
Number of sequences better than 1.0e-05: 87
Number of HSP's gapped: 6805
Number of HSP's successfully gapped: 103
Length of query: 333
Length of database: 17,681,374
Length adjustment: 103
Effective length of query: 230
Effective length of database: 14,273,310
Effective search space: 3282861300
Effective search space used: 3282861300
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)

Search to RefSeqCP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-000822
         (999 letters)

Database: RefSeq49_CP.fasta 
           33,336 sequences; 18,874,504 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_537546.2| PREDICTED: similar to Alpha-1-antichymotrypsin ...   286   5e-85
Alignment   gi|XP_547960.2| PREDICTED: similar to Corticosteroid-binding gl...   209   1e-56
Alignment   gi|NP_001073578.1| serpin peptidase inhibitor, clade A (alpha-1...   210   6e-55
Alignment   gi|XP_537544.2| PREDICTED: similar to serine (or cysteine) prot...   209   1e-54
Alignment   gi|XP_547962.2| PREDICTED: similar to serine (or cysteine) prot...   194   3e-52
Alignment   gi|XP_538128.1| PREDICTED: similar to Thyroxine-binding globuli...   199   6e-52
Alignment   gi|XP_855206.1| PREDICTED: similar to serine (or cysteine) prot...   183   2e-49
Alignment   gi|XP_855210.1| PREDICTED: similar to serine (or cysteine) prot...   182   8e-48
Alignment   gi|XP_537545.1| PREDICTED: similar to serine (or cysteine) prot...   176   2e-44
Alignment   gi|XP_855208.1| PREDICTED: similar to Corticosteroid-binding gl...   148   7e-36

>ref|XP_537546.2| PREDICTED: similar to Alpha-1-antichymotrypsin precursor (ACT)
           [Canis familiaris].
          Length = 421

 Score =  286 bits (732), Expect(2) = 5e-85
 Identities = 149/252 (59%), Positives = 185/252 (73%)
 Frame = +2

Query: 119 CSRVHCLPADDLASKTVTLKGQIKKLPAHNTAVVSSNTDFAFSLYKQLVSLDPSKNVIFS 298
           C  VHCLP      + VT +    +   ++  + SSNTDF  SLYK+L S  P KNVIFS
Sbjct: 15  CPTVHCLPEGMRDPENVTQEDLPNETSENSLRLASSNTDFTLSLYKELASKSPDKNVIFS 74

Query: 299 PLSVSIALAFLSLGARGPTLIELLEGLKFNLTKTPEAEIHQGFQHLLRALSQPSNLLQLN 478
           P+S+SIALAFLSLGA+G T  E+LEGLKFNLT+ P+ EIH+GFQHLLRAL QPS+ LQL+
Sbjct: 75  PMSISIALAFLSLGAQGTTQTEILEGLKFNLTEIPDREIHRGFQHLLRALHQPSSELQLS 134

Query: 479 VGNAMFVDERLKLLDKFVQDAHELYFSEAFSISFKDSDAAIEFINNYVKNKTKGKIVDLF 658
           VGNAMFV E+LKLL+ FV+DA  LY SEAFS +F++S AA + IN+YVKN+T+GKIVDL 
Sbjct: 135 VGNAMFVGEQLKLLETFVEDARALYASEAFSTNFQNSAAAEKLINDYVKNRTQGKIVDLV 194

Query: 659 KQLSPDTVLVLVNCIYFKAKWKMPFHPSFTTEADFHVSKNRTVRVPMMGITGRIVPYCMD 838
           K L   T +VLVN I+ KAKWK PF P  T ++ F VSK+R+V+VPMM +    VPY  D
Sbjct: 195 KDLDLHTAVVLVNYIFLKAKWKTPFDPRDTFKSKFQVSKSRSVKVPMMNLEDVWVPYFRD 254

Query: 839 QELACSVVELPY 874
             L+C+VVEL Y
Sbjct: 255 DALSCTVVELQY 266



 Score = 47.8 bits (112), Expect(2) = 5e-85
 Identities = 23/38 (60%), Positives = 27/38 (71%)
 Frame = +1

Query: 880 HDCTLFILSDDGMMEDVGAKLLPDTLMRWRDSLQPRRI 993
           +D  LF+L D+G ME V A LLP+TL RW  SLQ RRI
Sbjct: 269 NDSALFVLPDEGRMEAVEAMLLPETLRRWTHSLQMRRI 306


>ref|XP_547960.2| PREDICTED: similar to Corticosteroid-binding globulin precursor
           (CBG) (Transcortin) [Canis familiaris].
          Length = 404

 Score =  209 bits (532), Expect(2) = 1e-56
 Identities = 105/216 (48%), Positives = 142/216 (65%)
 Frame = +2

Query: 227 NTDFAFSLYKQLVSLDPSKNVIFSPLSVSIALAFLSLGARGPTLIELLEGLKFNLTKTPE 406
           N DFAF+LY+ LV+  P KNV  SP+S+S+ALA LSLGA G T ++LL+GL FNLTK  E
Sbjct: 42  NVDFAFNLYRHLVASSPDKNVFISPVSISMALAMLSLGACGYTRVQLLQGLGFNLTKMSE 101

Query: 407 AEIHQGFQHLLRALSQPSNLLQLNVGNAMFVDERLKLLDKFVQDAHELYFSEAFSISFKD 586
           AEIHQGF+HL   L +   +L++ +GNA+F+D  L+LL+ F  D    Y  EA++  F+D
Sbjct: 102 AEIHQGFRHLRHLLEKSDTMLEMTMGNALFLDRSLELLEPFSADTKHYYDLEAWATDFQD 161

Query: 587 SDAAIEFINNYVKNKTKGKIVDLFKQLSPDTVLVLVNCIYFKAKWKMPFHPSFTTEADFH 766
              A   IN Y+KNKT+GKIVDL  +L    +++LVN I+FK  W+ PF P  T E DF+
Sbjct: 162 GTGASRQINEYIKNKTQGKIVDLLSKLDSSAMVILVNYIFFKGTWEHPFDPESTREEDFY 221

Query: 767 VSKNRTVRVPMMGITGRIVPYCMDQELACSVVELPY 874
           V++   VRVP M      + +  DQ L C +V+L Y
Sbjct: 222 VNETTVVRVPTM-FQSSTIKHLNDQVLPCQLVQLEY 256



 Score = 29.6 bits (65), Expect(2) = 1e-56
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = +1

Query: 895 FILSDDGMMEDVGAKLLPDTLMRWRDS 975
           FIL ++G M+ V A L  DT+ RW +S
Sbjct: 264 FILPEEGKMDTVIAALSRDTIQRWSES 290


>ref|NP_001073578.1| serpin peptidase inhibitor, clade A (alpha-1 antiproteinase,
           antitrypsin), member 1 [Canis lupus familiaris].
          Length = 415

 Score =  210 bits (535), Expect(2) = 6e-55
 Identities = 103/209 (49%), Positives = 142/209 (67%), Gaps = 3/209 (1%)
 Frame = +2

Query: 197 PAHNTA---VVSSNTDFAFSLYKQLVSLDPSKNVIFSPLSVSIALAFLSLGARGPTLIEL 367
           P H  A   +  +  DFAFSLY+Q+     + N+ FSP+S++ A A LSLG +G T  ++
Sbjct: 38  PEHQPACHKIAPNLADFAFSLYRQVAQESNTTNIFFSPVSIATAFAMLSLGTKGDTHTQI 97

Query: 368 LEGLKFNLTKTPEAEIHQGFQHLLRALSQPSNLLQLNVGNAMFVDERLKLLDKFVQDAHE 547
           ++GL FNLT+  E E+HQGF  LL  L+QP N LQL  G+ +F+++ +KLL+KF++D   
Sbjct: 98  MQGLGFNLTERAEREVHQGFHQLLSILNQPDNQLQLTTGSGLFINDTIKLLNKFLEDVRN 157

Query: 548 LYFSEAFSISFKDSDAAIEFINNYVKNKTKGKIVDLFKQLSPDTVLVLVNCIYFKAKWKM 727
           LY SEAF+I+F+ ++ A + INNYV+  T+GKIVDL K L  DTV  LVN I+FK KW+ 
Sbjct: 158 LYHSEAFTINFRHTEEAKKQINNYVEKGTQGKIVDLVKDLDEDTVFALVNYIFFKGKWEK 217

Query: 728 PFHPSFTTEADFHVSKNRTVRVPMMGITG 814
           PF    TTE DFHV ++ TV+VPMM   G
Sbjct: 218 PFEVEHTTEEDFHVDEHTTVKVPMMSRLG 246



 Score = 23.1 bits (48), Expect(2) = 6e-55
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = +1

Query: 895 FILSDDGMMEDVGAKLLPDTLMRWRDSLQPR 987
           FIL D+G M+ + +KL  + L ++ +    R
Sbjct: 273 FILPDEGKMQHLESKLTKEVLAKFLEKRYAR 303


>ref|XP_537544.2| PREDICTED: similar to serine (or cysteine) proteinase inhibitor,
           clade A (alpha-1 antiproteinase, antitrypsin), member 9
           [Canis familiaris].
          Length = 418

 Score =  209 bits (532), Expect(2) = 1e-54
 Identities = 114/250 (45%), Positives = 154/250 (61%), Gaps = 1/250 (0%)
 Frame = +2

Query: 128 VHCLPADDLASKTVTLKGQIKKLPAHNTAVVSSNTDFAFSLYKQLVSLDPSKNVIFSPLS 307
           ++C+P     SK        +   A   +  SSNTDFAF LY++L+   P +NV FSPLS
Sbjct: 18  IYCVPPPRAPSKGSPCMSSTRSTAASQLS--SSNTDFAFRLYQRLILKTPDQNVFFSPLS 75

Query: 308 VSIALAFLSLGARGPTLIELLEGLKFNLTKTPEAEIHQGFQHLLRALSQPSNLLQLNVGN 487
           VS  LA LSLGAR  T  ++L+GL FNLT  PE+ IHQ FQHLL +L  P   L L +G+
Sbjct: 76  VSACLAMLSLGARSATKTQILQGLGFNLTHLPESSIHQAFQHLLHSLRVPGKDLDLRMGS 135

Query: 488 AMFVDERLKLLDKFVQDAHELYFSEAFSISFKDSDAAIEFINNYVKNKTKGKIVDLFKQL 667
            +F+ + L L   F+ D   LY S+ FS  F  S  A E IN+YV+ +TKGK+V+L + L
Sbjct: 136 VLFIKKELWLQTNFLDDVKRLYESKVFSTDFSSSSTAREKINSYVEKETKGKVVNLIQSL 195

Query: 668 SPDTVLVLVNCIYFKAKWKMPFHPSFTTEAD-FHVSKNRTVRVPMMGITGRIVPYCMDQE 844
            P TV+VLVN I+FK KW+ PF+P +T+++  F V K  TV+VPMM        + +D E
Sbjct: 196 EPLTVMVLVNHIFFKGKWEKPFNPGYTSKSSPFLVGKRTTVKVPMMHQVEEFA-FGVDAE 254

Query: 845 LACSVVELPY 874
           L CSV+ + Y
Sbjct: 255 LKCSVLRMDY 264



 Score = 23.5 bits (49), Expect(2) = 1e-54
 Identities = 12/33 (36%), Positives = 15/33 (45%)
 Frame = +1

Query: 895 FILSDDGMMEDVGAKLLPDTLMRWRDSLQPRRI 993
           F+L   G M  +   L   TL +W   LQ R I
Sbjct: 272 FVLPGQGKMRQLEQALSSRTLRKWNHLLQKRWI 304


>ref|XP_547962.2| PREDICTED: similar to serine (or cysteine) proteinase inhibitor,
           clade A (alpha-1 antiproteinase, antitrypsin), member 4
           [Canis familiaris].
          Length = 417

 Score =  194 bits (493), Expect(2) = 3e-52
 Identities = 97/220 (44%), Positives = 139/220 (63%)
 Frame = +2

Query: 215 VVSSNTDFAFSLYKQLVSLDPSKNVIFSPLSVSIALAFLSLGARGPTLIELLEGLKFNLT 394
           +   NT FA   Y  + S  P  N+ FSPLS+S + A LSLGAR  +  ++LEGL FNLT
Sbjct: 45  IAPGNTAFALHFYHLMASQSPGSNIFFSPLSISASYAMLSLGARSHSKTQILEGLGFNLT 104

Query: 395 KTPEAEIHQGFQHLLRALSQPSNLLQLNVGNAMFVDERLKLLDKFVQDAHELYFSEAFSI 574
           +  E++IH+GFQHLL  L  P + L++++G+ +F+ + L +L +F+ D+   Y S+ F  
Sbjct: 105 EVSESDIHRGFQHLLHTLHLPDDRLEMHMGSTLFLSQDLLILPEFLNDSVAFYDSKLFLT 164

Query: 575 SFKDSDAAIEFINNYVKNKTKGKIVDLFKQLSPDTVLVLVNCIYFKAKWKMPFHPSFTTE 754
           +F D     + IN+++K +T+GKIVDL  +L+ D  +VLVN IYFKA W+ PF PS TT 
Sbjct: 165 NFHDPVGTTQLINDHIKEETQGKIVDLVSKLNTDIAMVLVNYIYFKALWEKPFQPSMTTT 224

Query: 755 ADFHVSKNRTVRVPMMGITGRIVPYCMDQELACSVVELPY 874
            DFHV +N  V+VPMM        Y  D+ L CSV+ + Y
Sbjct: 225 QDFHVDENTVVQVPMMLQDTAHHWYLNDRYLPCSVLRMDY 264



 Score = 30.0 bits (66), Expect(2) = 3e-52
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +1

Query: 895 FILSDDGMMEDVGAKLLPDTLMRWRDSLQPRRI 993
           FIL + G M+ V   L P+ L RW   LQ R++
Sbjct: 272 FILPNRGKMKQVEEALTPEMLTRWNRLLQKRKL 304


>ref|XP_538128.1| PREDICTED: similar to Thyroxine-binding globulin precursor
           (T4-binding globulin) [Canis familiaris].
          Length = 414

 Score =  199 bits (507), Expect(2) = 6e-52
 Identities = 108/250 (43%), Positives = 156/250 (62%), Gaps = 1/250 (0%)
 Frame = +2

Query: 128 VHCLPADDLASKTVTLKGQIKKLPAHNTAVVSSNTDFAFSLYKQLVSLDPSKNVIFSPLS 307
           +HC  +     K +T     K    +  +  S N DFAF+LY++     P +N+ FSP+S
Sbjct: 14  LHCASSIRSEGKVITCNSPPKNATFYKMS--SINADFAFNLYRRFTVETPDRNIFFSPVS 71

Query: 308 VSIALAFLSLGARGPTLIELLEGLKFNLTKTPEAEIHQGFQHLLRALSQPSNLLQLNVGN 487
           +S ALA LS GA   T I++LE L FNLT TP AEI QGFQHL+ +L+ P   L+L +GN
Sbjct: 72  ISAALAMLSFGACYSTQIQILESLGFNLTDTPMAEIQQGFQHLICSLNIPKKELELQMGN 131

Query: 488 AMFVDERLKLLDKFVQDAHELYFSEAFSISFKDSDAAIEFINNYVKNKTKGKIVDLFKQL 667
            +F+ ++LK L +F+ D   LY +E FS  F +  AA + IN++V+ +TKG++V L + L
Sbjct: 132 TLFIGKQLKPLAQFLDDVKSLYATEVFSTDFSNVSAAQQLINSHVEKQTKGEVVGLIQDL 191

Query: 668 SPDTVLVLVNCIYFKAKWKMPFHPSFTTEA-DFHVSKNRTVRVPMMGITGRIVPYCMDQE 844
            P+T++VLVN I+FKA+W  PF PS T E   F V K  TV+VPMM    +   + +D E
Sbjct: 192 KPNTIMVLVNYIHFKAQWANPFDPSKTEEGFSFSVDKTTTVKVPMMHQMEQYY-HLVDTE 250

Query: 845 LACSVVELPY 874
           L C+V+++ Y
Sbjct: 251 LNCTVLQMDY 260



 Score = 23.9 bits (50), Expect(2) = 6e-52
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +1

Query: 892 LFILSDDGMMEDVGAKLLPDTLMRWRDSLQ 981
           LF+L  +G +E V   +   TL +W   LQ
Sbjct: 267 LFVLPKEGQIEWVEGAMSSKTLKKWNRLLQ 296


>ref|XP_855206.1| PREDICTED: similar to serine (or cysteine) proteinase inhibitor,
           clade A (alpha-1 antiproteinase, antitrypsin), member 11
           [Canis familiaris].
          Length = 422

 Score =  183 bits (464), Expect(2) = 2e-49
 Identities = 99/227 (43%), Positives = 152/227 (66%), Gaps = 1/227 (0%)
 Frame = +2

Query: 197 PAHNTAVVSSNTDFAFSLYKQLVSLDPSKNVIFSPLSVSIALAFLSLGARGPTLIELLEG 376
           PA++  +  + T+FA  LYKQL + + S N+ FSP+S+S +LA LSLGA+  T  ++LEG
Sbjct: 45  PAYHK-ITPTITNFALHLYKQLAA-ETSGNIFFSPVSISTSLALLSLGAQVNTSTQILEG 102

Query: 377 LKFNLTKTPEAEIHQGFQHLLRALSQPSNLLQLNVGNAMFVDERLKLLDKFVQDAHELYF 556
           L FNLT+TPEA+IH+GFQ L+  L  PS+ L+L VGN++F+D++LK    F+    ELY 
Sbjct: 103 LGFNLTETPEADIHRGFQSLIHTLDLPSSKLELKVGNSLFLDKQLKPQQHFLDTIRELYG 162

Query: 557 SEAFSISFKDSDAAIEFINNYVKNKTKGKIVDLFKQLSPDTVLVLVNCIYFKAKWKMPFH 736
           + AFS +F DS      IN YV+ +T G++ D  ++ + DT++VL+N I+FKAKWK PF 
Sbjct: 163 AFAFSANFTDSATTRRQINEYVRKQTYGQVADGLQEFTQDTLMVLLNYIFFKAKWKHPFS 222

Query: 737 PSFTTEAD-FHVSKNRTVRVPMMGITGRIVPYCMDQELACSVVELPY 874
              T + + F V++  ++ +PMM     +  +  DQE+AC+V+++ Y
Sbjct: 223 RYQTQKQESFSVNERTSLHIPMMH-QKEMHRFLYDQEMACTVLQIEY 268



 Score = 32.3 bits (72), Expect(2) = 2e-49
 Identities = 16/31 (51%), Positives = 18/31 (58%)
 Frame = +1

Query: 892 LFILSDDGMMEDVGAKLLPDTLMRWRDSLQP 984
           L IL D G ME V A L P+TL +W   L P
Sbjct: 275 LLILPDPGKMEQVEAALQPETLRKWDQWLLP 305


>ref|XP_855210.1| PREDICTED: similar to serine (or cysteine) proteinase inhibitor,
           clade A (alpha-1 antiproteinase, antitrypsin), member 12
           [Canis familiaris].
          Length = 414

 Score =  182 bits (462), Expect(2) = 8e-48
 Identities = 93/235 (39%), Positives = 147/235 (62%), Gaps = 2/235 (0%)
 Frame = +2

Query: 176 KGQIKKLPAHNTA--VVSSNTDFAFSLYKQLVSLDPSKNVIFSPLSVSIALAFLSLGARG 349
           K QI+       A  ++  NTDF   LY++L S  P KN+ FSPLS+S A + LSLGA+ 
Sbjct: 33  KSQIQSWKGMKAAEGLIKRNTDFGCKLYRKLASNSPRKNIFFSPLSISAAFSMLSLGAQD 92

Query: 350 PTLIELLEGLKFNLTKTPEAEIHQGFQHLLRALSQPSNLLQLNVGNAMFVDERLKLLDKF 529
            TL E+ +G  FN    PE +IH+GF +L+  ++Q S  L+L++ N +F+D++L+   KF
Sbjct: 93  STLDEIKQG--FNFRNMPERDIHEGFHYLIYRMNQGSQDLELHLRNTLFIDQKLQPEKKF 150

Query: 530 VQDAHELYFSEAFSISFKDSDAAIEFINNYVKNKTKGKIVDLFKQLSPDTVLVLVNCIYF 709
           + +   LY ++    +F++     + IN+YV  KT+GKI +L K + P TV++L NCI+F
Sbjct: 151 LTNVKNLYSADTVPTNFQNLGDTRKQINDYVSQKTQGKINNLIKNIDPGTVMLLTNCIFF 210

Query: 710 KAKWKMPFHPSFTTEADFHVSKNRTVRVPMMGITGRIVPYCMDQELACSVVELPY 874
           +A+W+  F P  T E DF +  N+ V+VPMM   G +     D++L+C+++E+PY
Sbjct: 211 RARWQHEFDPKITKEEDFFLDGNQRVKVPMM-FRGGMYETGYDEQLSCTILEMPY 264



 Score = 27.3 bits (59), Expect(2) = 8e-48
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +1

Query: 895 FILSDDGMMEDVGAKLLPDTLMRWRDSLQPR 987
           FIL D+G M+ V   L  DT  RW+  +  R
Sbjct: 272 FILPDEGKMKTVEEALKADTFDRWKKLITRR 302


>ref|XP_537545.1| PREDICTED: similar to serine (or cysteine) proteinase inhibitor,
           clade A (alpha-1 antiproteinase, antitrypsin), member 5
           [Canis familiaris].
          Length = 407

 Score =  176 bits (447), Expect(2) = 2e-44
 Identities = 96/233 (41%), Positives = 141/233 (60%)
 Frame = +2

Query: 176 KGQIKKLPAHNTAVVSSNTDFAFSLYKQLVSLDPSKNVIFSPLSVSIALAFLSLGARGPT 355
           K ++K+ P  +T V  ++ DFAF LY+ L +  P +N+ FSPLS+S  LA LSLGA   T
Sbjct: 28  KKRVKEPPVAST-VAPASRDFAFDLYRALATAAPDQNIFFSPLSISTTLAMLSLGAGSST 86

Query: 356 LIELLEGLKFNLTKTPEAEIHQGFQHLLRALSQPSNLLQLNVGNAMFVDERLKLLDKFVQ 535
            +++LEGL  +  +  E  +H+    LL   +QP   +QL++GNA+F+   ++L D F+Q
Sbjct: 87  KVQILEGLGLHPQEGLEEALHRRIHQLLWDFAQPREDIQLSLGNALFISPTVRLQDTFLQ 146

Query: 536 DAHELYFSEAFSISFKDSDAAIEFINNYVKNKTKGKIVDLFKQLSPDTVLVLVNCIYFKA 715
               LY ++ F  +F D   A + IN+YV  +TKGKIVDL K L     +V+VN I+FKA
Sbjct: 147 AVKMLYLADTFPTNFGDPAGAQKQINDYVAKQTKGKIVDLAKDLDSTEAMVMVNYIFFKA 206

Query: 716 KWKMPFHPSFTTEADFHVSKNRTVRVPMMGITGRIVPYCMDQELACSVVELPY 874
           KW+  F+   T + DFHV+    V+VPMM        Y +D+ L+C VV +PY
Sbjct: 207 KWETGFNHKSTRKQDFHVTSEMVVQVPMMKQEDHYY-YYVDRNLSCRVVGVPY 258



 Score = 21.6 bits (44), Expect(2) = 2e-44
 Identities = 10/42 (23%), Positives = 18/42 (42%)
 Frame = +1

Query: 868 PVHRHDCTLFILSDDGMMEDVGAKLLPDTLMRWRDSLQPRRI 993
           P   +   LF+L  +G M  +   +   TL +W      R++
Sbjct: 257 PYRGNATALFVLPGEGQMGQLENGMSEKTLKKWLKMFTKRQL 298


>ref|XP_855208.1| PREDICTED: similar to Corticosteroid-binding globulin precursor
           (CBG) (Transcortin) [Canis familiaris].
          Length = 471

 Score =  148 bits (374), Expect = 7e-36
 Identities = 83/226 (36%), Positives = 128/226 (56%)
 Frame = +2

Query: 197 PAHNTAVVSSNTDFAFSLYKQLVSLDPSKNVIFSPLSVSIALAFLSLGARGPTLIELLEG 376
           P H+  + + N  FA  L+K L+   P KN+IFSPLS+S + A LSLG R  TL  LLEG
Sbjct: 93  PVHHK-IEAGNKAFAHKLFKTLLMEHPRKNIIFSPLSISASFAMLSLGTRSTTLTNLLEG 151

Query: 377 LKFNLTKTPEAEIHQGFQHLLRALSQPSNLLQLNVGNAMFVDERLKLLDKFVQDAHELYF 556
           L F+L      ++H GFQ +++ L Q +    L   + +F+D   K+   F+ D   +Y 
Sbjct: 152 LGFDLKVIKVWDVHHGFQSVIQMLKQLNRAGHLMHRDMLFIDSNRKINSPFLWDTQAMYD 211

Query: 557 SEAFSISFKDSDAAIEFINNYVKNKTKGKIVDLFKQLSPDTVLVLVNCIYFKAKWKMPFH 736
             A  I F+D     + IN++V  KT  +  +L   L+P T L LV+ ++FK  W+M FH
Sbjct: 212 VRARMIDFRDVVKTKKQINHFVAEKTHKRTKELITSLNPHTFLFLVDYVFFKGTWEMAFH 271

Query: 737 PSFTTEADFHVSKNRTVRVPMMGITGRIVPYCMDQELACSVVELPY 874
            +   + DF V K+ TV V M+  TG+++ Y   +EL  ++V++P+
Sbjct: 272 SNLMHKEDFFVDKHTTVPVDMIWKTGQMI-YSRSEELFATMVKIPF 316


  Database: RefSeq49_CP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,874,504
  Number of sequences in database:  33,336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 41,028,838
Number of extensions: 1183975
Number of successful extensions: 7068
Number of sequences better than 1.0e-05: 45
Number of HSP's gapped: 6920
Number of HSP's successfully gapped: 56
Length of query: 333
Length of database: 18,874,504
Length adjustment: 103
Effective length of query: 230
Effective length of database: 15,440,896
Effective search space: 3551406080
Effective search space used: 3551406080
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)

Search to RefSeqHP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-000822
         (999 letters)

Database: RefSeq49_HP.fasta 
           32,964 sequences; 18,297,164 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001076.2| alpha-1-antichymotrypsin precursor [Homo sapien...   275   9e-81
Alignment   gi|NP_001747.2| corticosteroid-binding globulin precursor [Homo...   212   8e-57
Alignment   gi|NP_001002236.1| alpha-1-antitrypsin precursor [Homo sapiens].     215   4e-56
Alignment   gi|NP_001002235.1| alpha-1-antitrypsin precursor [Homo sapiens].     215   4e-56
Alignment   gi|NP_000286.3| alpha-1-antitrypsin precursor [Homo sapiens].        215   4e-56
Alignment   gi|NP_001121179.1| alpha-1-antitrypsin precursor [Homo sapiens].     215   4e-56
Alignment   gi|NP_001121178.1| alpha-1-antitrypsin precursor [Homo sapiens].     215   4e-56
Alignment   gi|NP_001121177.1| alpha-1-antitrypsin precursor [Homo sapiens].     215   4e-56
Alignment   gi|NP_001121176.1| alpha-1-antitrypsin precursor [Homo sapiens].     215   4e-56
Alignment   gi|NP_001121175.1| alpha-1-antitrypsin precursor [Homo sapiens].     215   4e-56

>ref|NP_001076.2| alpha-1-antichymotrypsin precursor [Homo sapiens].
          Length = 423

 Score =  275 bits (702), Expect(2) = 9e-81
 Identities = 144/252 (57%), Positives = 181/252 (71%)
 Frame = +2

Query: 119 CSRVHCLPADDLASKTVTLKGQIKKLPAHNTAVVSSNTDFAFSLYKQLVSLDPSKNVIFS 298
           C  V C P   L  + +T + Q +     +  + S+N DFAFSLYKQLV   P KNVIFS
Sbjct: 18  CPAVLCHPNSPLDEENLTQENQDRGTHV-DLGLASANVDFAFSLYKQLVLKAPDKNVIFS 76

Query: 299 PLSVSIALAFLSLGARGPTLIELLEGLKFNLTKTPEAEIHQGFQHLLRALSQPSNLLQLN 478
           PLS+S ALAFLSLGA   TL E+L+GLKFNLT+T EAEIHQ FQHLLR L+Q S+ LQL+
Sbjct: 77  PLSISTALAFLSLGAHNTTLTEILKGLKFNLTETSEAEIHQSFQHLLRTLNQSSDELQLS 136

Query: 479 VGNAMFVDERLKLLDKFVQDAHELYFSEAFSISFKDSDAAIEFINNYVKNKTKGKIVDLF 658
           +GNAMFV E+L LLD+F +DA  LY SEAF+  F+DS AA + IN+YVKN T+GKI DL 
Sbjct: 137 MGNAMFVKEQLSLLDRFTEDAKRLYGSEAFATDFQDSAAAKKLINDYVKNGTRGKITDLI 196

Query: 659 KQLSPDTVLVLVNCIYFKAKWKMPFHPSFTTEADFHVSKNRTVRVPMMGITGRIVPYCMD 838
           K L   T++VLVN I+FKAKW+MPF P  T ++ F++SK + V VPMM +    +PY  D
Sbjct: 197 KDLDSQTMMVLVNYIFFKAKWEMPFDPQDTHQSRFYLSKKKWVMVPMMSLHHLTIPYFRD 256

Query: 839 QELACSVVELPY 874
           +EL+C+VVEL Y
Sbjct: 257 EELSCTVVELKY 268



 Score = 45.1 bits (105), Expect(2) = 9e-81
 Identities = 22/34 (64%), Positives = 25/34 (73%)
 Frame = +1

Query: 892 LFILSDDGMMEDVGAKLLPDTLMRWRDSLQPRRI 993
           LFIL D   ME+V A LLP+TL RWRDSL+ R I
Sbjct: 275 LFILPDQDKMEEVEAMLLPETLKRWRDSLEFREI 308


>ref|NP_001747.2| corticosteroid-binding globulin precursor [Homo sapiens].
          Length = 405

 Score =  212 bits (540), Expect(2) = 8e-57
 Identities = 108/224 (48%), Positives = 147/224 (65%)
 Frame = +2

Query: 203 HNTAVVSSNTDFAFSLYKQLVSLDPSKNVIFSPLSVSIALAFLSLGARGPTLIELLEGLK 382
           H+  + S+N DFAFSLYK LV+L P KN+  SP+S+S+ALA LSLG  G T  +LL+GL 
Sbjct: 35  HHRGLASANVDFAFSLYKHLVALSPKKNIFISPVSISMALAMLSLGTCGHTRAQLLQGLG 94

Query: 383 FNLTKTPEAEIHQGFQHLLRALSQPSNLLQLNVGNAMFVDERLKLLDKFVQDAHELYFSE 562
           FNLT+  E EIHQGFQHL +  ++    L++ +GNA+F+D  L+LL+ F  D    Y SE
Sbjct: 95  FNLTERSETEIHQGFQHLHQLFAKSDTSLEMTMGNALFLDGSLELLESFSADIKHYYESE 154

Query: 563 AFSISFKDSDAAIEFINNYVKNKTKGKIVDLFKQLSPDTVLVLVNCIYFKAKWKMPFHPS 742
             +++F+D   A   IN+YVKNKT+GKIVDLF  L    +LVLVN I+FK  W  PF  +
Sbjct: 155 VLAMNFQDWATASRQINSYVKNKTQGKIVDLFSGLDSPAILVLVNYIFFKGTWTQPFDLA 214

Query: 743 FTTEADFHVSKNRTVRVPMMGITGRIVPYCMDQELACSVVELPY 874
            T E +F+V +   V+VPMM +    + Y  D EL C +V++ Y
Sbjct: 215 STREENFYVDETTVVKVPMM-LQSSTISYLHDAELPCQLVQMNY 257



 Score = 27.3 bits (59), Expect(2) = 8e-57
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = +1

Query: 895 FILSDDGMMEDVGAKLLPDTLMRWRDSLQPRRI 993
           FIL D G M  V A L  DT+ RW   L   ++
Sbjct: 265 FILPDKGKMNTVIAALSRDTINRWSAGLTSSQV 297


>ref|NP_001002236.1| alpha-1-antitrypsin precursor [Homo sapiens].
          Length = 418

 Score =  215 bits (548), Expect = 4e-56
 Identities = 113/221 (51%), Positives = 149/221 (67%)
 Frame = +2

Query: 140 PADDLASKTVTLKGQIKKLPAHNTAVVSSNTDFAFSLYKQLVSLDPSKNVIFSPLSVSIA 319
           P  D A KT T     +  P  N  +  +  +FAFSLY+QL     S N+ FSP+S++ A
Sbjct: 27  PQGDAAQKTDTSHHD-QDHPTFNK-ITPNLAEFAFSLYRQLAHQSNSTNIFFSPVSIATA 84

Query: 320 LAFLSLGARGPTLIELLEGLKFNLTKTPEAEIHQGFQHLLRALSQPSNLLQLNVGNAMFV 499
            A LSLG +  T  E+LEGL FNLT+ PEA+IH+GFQ LLR L+QP + LQL  GN +F+
Sbjct: 85  FAMLSLGTKADTHDEILEGLNFNLTEIPEAQIHEGFQELLRTLNQPDSQLQLTTGNGLFL 144

Query: 500 DERLKLLDKFVQDAHELYFSEAFSISFKDSDAAIEFINNYVKNKTKGKIVDLFKQLSPDT 679
            E LKL+DKF++D  +LY SEAF+++F D++ A + IN+YV+  T+GKIVDL K+L  DT
Sbjct: 145 SEGLKLVDKFLEDVKKLYHSEAFTVNFGDTEEAKKQINDYVEKGTQGKIVDLVKELDRDT 204

Query: 680 VLVLVNCIYFKAKWKMPFHPSFTTEADFHVSKNRTVRVPMM 802
           V  LVN I+FK KW+ PF    T E DFHV +  TV+VPMM
Sbjct: 205 VFALVNYIFFKGKWERPFEVKDTEEEDFHVDQVTTVKVPMM 245


>ref|NP_001002235.1| alpha-1-antitrypsin precursor [Homo sapiens].
          Length = 418

 Score =  215 bits (548), Expect = 4e-56
 Identities = 113/221 (51%), Positives = 149/221 (67%)
 Frame = +2

Query: 140 PADDLASKTVTLKGQIKKLPAHNTAVVSSNTDFAFSLYKQLVSLDPSKNVIFSPLSVSIA 319
           P  D A KT T     +  P  N  +  +  +FAFSLY+QL     S N+ FSP+S++ A
Sbjct: 27  PQGDAAQKTDTSHHD-QDHPTFNK-ITPNLAEFAFSLYRQLAHQSNSTNIFFSPVSIATA 84

Query: 320 LAFLSLGARGPTLIELLEGLKFNLTKTPEAEIHQGFQHLLRALSQPSNLLQLNVGNAMFV 499
            A LSLG +  T  E+LEGL FNLT+ PEA+IH+GFQ LLR L+QP + LQL  GN +F+
Sbjct: 85  FAMLSLGTKADTHDEILEGLNFNLTEIPEAQIHEGFQELLRTLNQPDSQLQLTTGNGLFL 144

Query: 500 DERLKLLDKFVQDAHELYFSEAFSISFKDSDAAIEFINNYVKNKTKGKIVDLFKQLSPDT 679
            E LKL+DKF++D  +LY SEAF+++F D++ A + IN+YV+  T+GKIVDL K+L  DT
Sbjct: 145 SEGLKLVDKFLEDVKKLYHSEAFTVNFGDTEEAKKQINDYVEKGTQGKIVDLVKELDRDT 204

Query: 680 VLVLVNCIYFKAKWKMPFHPSFTTEADFHVSKNRTVRVPMM 802
           V  LVN I+FK KW+ PF    T E DFHV +  TV+VPMM
Sbjct: 205 VFALVNYIFFKGKWERPFEVKDTEEEDFHVDQVTTVKVPMM 245


>ref|NP_000286.3| alpha-1-antitrypsin precursor [Homo sapiens].
          Length = 418

 Score =  215 bits (548), Expect = 4e-56
 Identities = 113/221 (51%), Positives = 149/221 (67%)
 Frame = +2

Query: 140 PADDLASKTVTLKGQIKKLPAHNTAVVSSNTDFAFSLYKQLVSLDPSKNVIFSPLSVSIA 319
           P  D A KT T     +  P  N  +  +  +FAFSLY+QL     S N+ FSP+S++ A
Sbjct: 27  PQGDAAQKTDTSHHD-QDHPTFNK-ITPNLAEFAFSLYRQLAHQSNSTNIFFSPVSIATA 84

Query: 320 LAFLSLGARGPTLIELLEGLKFNLTKTPEAEIHQGFQHLLRALSQPSNLLQLNVGNAMFV 499
            A LSLG +  T  E+LEGL FNLT+ PEA+IH+GFQ LLR L+QP + LQL  GN +F+
Sbjct: 85  FAMLSLGTKADTHDEILEGLNFNLTEIPEAQIHEGFQELLRTLNQPDSQLQLTTGNGLFL 144

Query: 500 DERLKLLDKFVQDAHELYFSEAFSISFKDSDAAIEFINNYVKNKTKGKIVDLFKQLSPDT 679
            E LKL+DKF++D  +LY SEAF+++F D++ A + IN+YV+  T+GKIVDL K+L  DT
Sbjct: 145 SEGLKLVDKFLEDVKKLYHSEAFTVNFGDTEEAKKQINDYVEKGTQGKIVDLVKELDRDT 204

Query: 680 VLVLVNCIYFKAKWKMPFHPSFTTEADFHVSKNRTVRVPMM 802
           V  LVN I+FK KW+ PF    T E DFHV +  TV+VPMM
Sbjct: 205 VFALVNYIFFKGKWERPFEVKDTEEEDFHVDQVTTVKVPMM 245


>ref|NP_001121179.1| alpha-1-antitrypsin precursor [Homo sapiens].
          Length = 418

 Score =  215 bits (548), Expect = 4e-56
 Identities = 113/221 (51%), Positives = 149/221 (67%)
 Frame = +2

Query: 140 PADDLASKTVTLKGQIKKLPAHNTAVVSSNTDFAFSLYKQLVSLDPSKNVIFSPLSVSIA 319
           P  D A KT T     +  P  N  +  +  +FAFSLY+QL     S N+ FSP+S++ A
Sbjct: 27  PQGDAAQKTDTSHHD-QDHPTFNK-ITPNLAEFAFSLYRQLAHQSNSTNIFFSPVSIATA 84

Query: 320 LAFLSLGARGPTLIELLEGLKFNLTKTPEAEIHQGFQHLLRALSQPSNLLQLNVGNAMFV 499
            A LSLG +  T  E+LEGL FNLT+ PEA+IH+GFQ LLR L+QP + LQL  GN +F+
Sbjct: 85  FAMLSLGTKADTHDEILEGLNFNLTEIPEAQIHEGFQELLRTLNQPDSQLQLTTGNGLFL 144

Query: 500 DERLKLLDKFVQDAHELYFSEAFSISFKDSDAAIEFINNYVKNKTKGKIVDLFKQLSPDT 679
            E LKL+DKF++D  +LY SEAF+++F D++ A + IN+YV+  T+GKIVDL K+L  DT
Sbjct: 145 SEGLKLVDKFLEDVKKLYHSEAFTVNFGDTEEAKKQINDYVEKGTQGKIVDLVKELDRDT 204

Query: 680 VLVLVNCIYFKAKWKMPFHPSFTTEADFHVSKNRTVRVPMM 802
           V  LVN I+FK KW+ PF    T E DFHV +  TV+VPMM
Sbjct: 205 VFALVNYIFFKGKWERPFEVKDTEEEDFHVDQVTTVKVPMM 245


>ref|NP_001121178.1| alpha-1-antitrypsin precursor [Homo sapiens].
          Length = 418

 Score =  215 bits (548), Expect = 4e-56
 Identities = 113/221 (51%), Positives = 149/221 (67%)
 Frame = +2

Query: 140 PADDLASKTVTLKGQIKKLPAHNTAVVSSNTDFAFSLYKQLVSLDPSKNVIFSPLSVSIA 319
           P  D A KT T     +  P  N  +  +  +FAFSLY+QL     S N+ FSP+S++ A
Sbjct: 27  PQGDAAQKTDTSHHD-QDHPTFNK-ITPNLAEFAFSLYRQLAHQSNSTNIFFSPVSIATA 84

Query: 320 LAFLSLGARGPTLIELLEGLKFNLTKTPEAEIHQGFQHLLRALSQPSNLLQLNVGNAMFV 499
            A LSLG +  T  E+LEGL FNLT+ PEA+IH+GFQ LLR L+QP + LQL  GN +F+
Sbjct: 85  FAMLSLGTKADTHDEILEGLNFNLTEIPEAQIHEGFQELLRTLNQPDSQLQLTTGNGLFL 144

Query: 500 DERLKLLDKFVQDAHELYFSEAFSISFKDSDAAIEFINNYVKNKTKGKIVDLFKQLSPDT 679
            E LKL+DKF++D  +LY SEAF+++F D++ A + IN+YV+  T+GKIVDL K+L  DT
Sbjct: 145 SEGLKLVDKFLEDVKKLYHSEAFTVNFGDTEEAKKQINDYVEKGTQGKIVDLVKELDRDT 204

Query: 680 VLVLVNCIYFKAKWKMPFHPSFTTEADFHVSKNRTVRVPMM 802
           V  LVN I+FK KW+ PF    T E DFHV +  TV+VPMM
Sbjct: 205 VFALVNYIFFKGKWERPFEVKDTEEEDFHVDQVTTVKVPMM 245


>ref|NP_001121177.1| alpha-1-antitrypsin precursor [Homo sapiens].
          Length = 418

 Score =  215 bits (548), Expect = 4e-56
 Identities = 113/221 (51%), Positives = 149/221 (67%)
 Frame = +2

Query: 140 PADDLASKTVTLKGQIKKLPAHNTAVVSSNTDFAFSLYKQLVSLDPSKNVIFSPLSVSIA 319
           P  D A KT T     +  P  N  +  +  +FAFSLY+QL     S N+ FSP+S++ A
Sbjct: 27  PQGDAAQKTDTSHHD-QDHPTFNK-ITPNLAEFAFSLYRQLAHQSNSTNIFFSPVSIATA 84

Query: 320 LAFLSLGARGPTLIELLEGLKFNLTKTPEAEIHQGFQHLLRALSQPSNLLQLNVGNAMFV 499
            A LSLG +  T  E+LEGL FNLT+ PEA+IH+GFQ LLR L+QP + LQL  GN +F+
Sbjct: 85  FAMLSLGTKADTHDEILEGLNFNLTEIPEAQIHEGFQELLRTLNQPDSQLQLTTGNGLFL 144

Query: 500 DERLKLLDKFVQDAHELYFSEAFSISFKDSDAAIEFINNYVKNKTKGKIVDLFKQLSPDT 679
            E LKL+DKF++D  +LY SEAF+++F D++ A + IN+YV+  T+GKIVDL K+L  DT
Sbjct: 145 SEGLKLVDKFLEDVKKLYHSEAFTVNFGDTEEAKKQINDYVEKGTQGKIVDLVKELDRDT 204

Query: 680 VLVLVNCIYFKAKWKMPFHPSFTTEADFHVSKNRTVRVPMM 802
           V  LVN I+FK KW+ PF    T E DFHV +  TV+VPMM
Sbjct: 205 VFALVNYIFFKGKWERPFEVKDTEEEDFHVDQVTTVKVPMM 245


>ref|NP_001121176.1| alpha-1-antitrypsin precursor [Homo sapiens].
          Length = 418

 Score =  215 bits (548), Expect = 4e-56
 Identities = 113/221 (51%), Positives = 149/221 (67%)
 Frame = +2

Query: 140 PADDLASKTVTLKGQIKKLPAHNTAVVSSNTDFAFSLYKQLVSLDPSKNVIFSPLSVSIA 319
           P  D A KT T     +  P  N  +  +  +FAFSLY+QL     S N+ FSP+S++ A
Sbjct: 27  PQGDAAQKTDTSHHD-QDHPTFNK-ITPNLAEFAFSLYRQLAHQSNSTNIFFSPVSIATA 84

Query: 320 LAFLSLGARGPTLIELLEGLKFNLTKTPEAEIHQGFQHLLRALSQPSNLLQLNVGNAMFV 499
            A LSLG +  T  E+LEGL FNLT+ PEA+IH+GFQ LLR L+QP + LQL  GN +F+
Sbjct: 85  FAMLSLGTKADTHDEILEGLNFNLTEIPEAQIHEGFQELLRTLNQPDSQLQLTTGNGLFL 144

Query: 500 DERLKLLDKFVQDAHELYFSEAFSISFKDSDAAIEFINNYVKNKTKGKIVDLFKQLSPDT 679
            E LKL+DKF++D  +LY SEAF+++F D++ A + IN+YV+  T+GKIVDL K+L  DT
Sbjct: 145 SEGLKLVDKFLEDVKKLYHSEAFTVNFGDTEEAKKQINDYVEKGTQGKIVDLVKELDRDT 204

Query: 680 VLVLVNCIYFKAKWKMPFHPSFTTEADFHVSKNRTVRVPMM 802
           V  LVN I+FK KW+ PF    T E DFHV +  TV+VPMM
Sbjct: 205 VFALVNYIFFKGKWERPFEVKDTEEEDFHVDQVTTVKVPMM 245


>ref|NP_001121175.1| alpha-1-antitrypsin precursor [Homo sapiens].
          Length = 418

 Score =  215 bits (548), Expect = 4e-56
 Identities = 113/221 (51%), Positives = 149/221 (67%)
 Frame = +2

Query: 140 PADDLASKTVTLKGQIKKLPAHNTAVVSSNTDFAFSLYKQLVSLDPSKNVIFSPLSVSIA 319
           P  D A KT T     +  P  N  +  +  +FAFSLY+QL     S N+ FSP+S++ A
Sbjct: 27  PQGDAAQKTDTSHHD-QDHPTFNK-ITPNLAEFAFSLYRQLAHQSNSTNIFFSPVSIATA 84

Query: 320 LAFLSLGARGPTLIELLEGLKFNLTKTPEAEIHQGFQHLLRALSQPSNLLQLNVGNAMFV 499
            A LSLG +  T  E+LEGL FNLT+ PEA+IH+GFQ LLR L+QP + LQL  GN +F+
Sbjct: 85  FAMLSLGTKADTHDEILEGLNFNLTEIPEAQIHEGFQELLRTLNQPDSQLQLTTGNGLFL 144

Query: 500 DERLKLLDKFVQDAHELYFSEAFSISFKDSDAAIEFINNYVKNKTKGKIVDLFKQLSPDT 679
            E LKL+DKF++D  +LY SEAF+++F D++ A + IN+YV+  T+GKIVDL K+L  DT
Sbjct: 145 SEGLKLVDKFLEDVKKLYHSEAFTVNFGDTEEAKKQINDYVEKGTQGKIVDLVKELDRDT 204

Query: 680 VLVLVNCIYFKAKWKMPFHPSFTTEADFHVSKNRTVRVPMM 802
           V  LVN I+FK KW+ PF    T E DFHV +  TV+VPMM
Sbjct: 205 VFALVNYIFFKGKWERPFEVKDTEEEDFHVDQVTTVKVPMM 245


  Database: RefSeq49_HP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,297,164
  Number of sequences in database:  32,964
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 40,133,262
Number of extensions: 1148595
Number of successful extensions: 6826
Number of sequences better than 1.0e-05: 59
Number of HSP's gapped: 6700
Number of HSP's successfully gapped: 68
Length of query: 333
Length of database: 18,297,164
Length adjustment: 103
Effective length of query: 230
Effective length of database: 14,901,872
Effective search space: 3427430560
Effective search space used: 3427430560
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)

Search to RefSeqMP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-000822
         (999 letters)

Database: RefSeq49_MP.fasta 
           30,036 sequences; 15,617,559 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_032484.1| serine protease inhibitor A3C precursor [Mus mu...   245   2e-71
Alignment   gi|NP_001161766.1| serine protease inhibitor A3F [Mus musculus].     243   6e-71
Alignment   gi|NP_001028507.2| serine protease inhibitor A3F [Mus musculus].     243   6e-71
Alignment   gi|NP_001161767.1| serine protease inhibitor A3F [Mus musculus].     243   6e-71
Alignment   gi|NP_033278.2| serine protease inhibitor A3N precursor [Mus mu...   239   1e-69
Alignment   gi|NP_001186869.1| serine (or cysteine) peptidase inhibitor, cl...   237   2e-68
Alignment   gi|XP_003085882.1| PREDICTED: serine protease inhibitor A3F iso...   237   2e-68
Alignment   gi|XP_003085883.1| PREDICTED: serine protease inhibitor A3F iso...   237   2e-68
Alignment   gi|NP_033279.2| serine protease inhibitor A3M precursor [Mus mu...   238   5e-68
Alignment   gi|NP_033277.1| serine protease inhibitor A3G [Mus musculus].        231   4e-67

>ref|NP_032484.1| serine protease inhibitor A3C precursor [Mus musculus].
          Length = 417

 Score =  245 bits (626), Expect(2) = 2e-71
 Identities = 125/252 (49%), Positives = 170/252 (67%)
 Frame = +2

Query: 119 CSRVHCLPADDLASKTVTLKGQIKKLPAHNTAVVSSNTDFAFSLYKQLVSLDPSKNVIFS 298
           C  V C P   L   T+  K +       +  + S NTDFAFSLYK+L   +P  N++FS
Sbjct: 15  CPGVLCFPDGTLERDTLFHKDKENGTQLDSLTLASINTDFAFSLYKKLALKNPDTNIVFS 74

Query: 299 PLSVSIALAFLSLGARGPTLIELLEGLKFNLTKTPEAEIHQGFQHLLRALSQPSNLLQLN 478
           PLS+S ALA +SLGA+G TL E+LEGL FNLT+TPEA+IHQGF HLL+ LS P   +Q++
Sbjct: 75  PLSISAALAIVSLGAKGNTLEEILEGLNFNLTETPEADIHQGFGHLLQRLSHPGEQVQIS 134

Query: 479 VGNAMFVDERLKLLDKFVQDAHELYFSEAFSISFKDSDAAIEFINNYVKNKTKGKIVDLF 658
            G+A+FV++ L++L +F + A  LY +EAF+  F+    A + IN+YV N+T+ KI  L 
Sbjct: 135 TGSALFVEKHLQILAEFQEKARALYQAEAFTADFQQPLEATKLINDYVSNQTQRKIKGLI 194

Query: 659 KQLSPDTVLVLVNCIYFKAKWKMPFHPSFTTEADFHVSKNRTVRVPMMGITGRIVPYCMD 838
             L  DT++VLVN IYFK KWKMPF+P  T E++F++   R+V+VPMM I     PY  D
Sbjct: 195 SDLDTDTLMVLVNYIYFKGKWKMPFNPRDTFESEFYLDVKRSVKVPMMKIKTLTTPYFRD 254

Query: 839 QELACSVVELPY 874
           +EL+C+VVEL Y
Sbjct: 255 EELSCTVVELKY 266



 Score = 43.1 bits (100), Expect(2) = 2e-71
 Identities = 18/34 (52%), Positives = 26/34 (76%)
 Frame = +1

Query: 892 LFILSDDGMMEDVGAKLLPDTLMRWRDSLQPRRI 993
           LFIL D G M+ V A L P+TL +W++SL+PR++
Sbjct: 273 LFILPDQGRMQQVEASLQPETLRKWKNSLRPRKM 306


>ref|NP_001161766.1| serine protease inhibitor A3F [Mus musculus].
          Length = 445

 Score =  243 bits (621), Expect(2) = 6e-71
 Identities = 122/245 (49%), Positives = 169/245 (68%)
 Frame = +2

Query: 140 PADDLASKTVTLKGQIKKLPAHNTAVVSSNTDFAFSLYKQLVSLDPSKNVIFSPLSVSIA 319
           P   L   T   + Q       +  + SSNTDFAFSLYK+LV  +P +NV+FSP S+  A
Sbjct: 12  PDVTLGRNTAVREVQENITSVDSLTLASSNTDFAFSLYKELVLKNPDENVVFSPFSICTA 71

Query: 320 LAFLSLGARGPTLIELLEGLKFNLTKTPEAEIHQGFQHLLRALSQPSNLLQLNVGNAMFV 499
           LA LSLGA+  TL E+LEGLKFNLT+TPE +IHQGF++LL  LSQP N +Q++ G+A+F+
Sbjct: 72  LALLSLGAKSNTLKEILEGLKFNLTETPEPDIHQGFRYLLDLLSQPGNQVQISTGSALFI 131

Query: 500 DERLKLLDKFVQDAHELYFSEAFSISFKDSDAAIEFINNYVKNKTKGKIVDLFKQLSPDT 679
           ++ L++L +F + A  LY +EAF+  F+    A + IN+YV N T+GKI +L   L   T
Sbjct: 132 EKHLQILAEFKEKARALYQAEAFTADFQQPLEATKLINDYVSNHTQGKIKELISDLDKRT 191

Query: 680 VLVLVNCIYFKAKWKMPFHPSFTTEADFHVSKNRTVRVPMMGITGRIVPYCMDQELACSV 859
           ++VLVN IYFK KW+MPF P  T +++F++ +NR+V+VPMM I     PY  D+EL+C+V
Sbjct: 192 LMVLVNYIYFKGKWEMPFDPDDTCKSEFYLDENRSVKVPMMKINNLTTPYFRDEELSCTV 251

Query: 860 VELPY 874
           VEL Y
Sbjct: 252 VELKY 256



 Score = 43.1 bits (100), Expect(2) = 6e-71
 Identities = 19/34 (55%), Positives = 24/34 (70%)
 Frame = +1

Query: 892 LFILSDDGMMEDVGAKLLPDTLMRWRDSLQPRRI 993
           +FIL D G M+ V A L P+TL  W+DSL+PR I
Sbjct: 263 MFILPDQGKMQQVEASLQPETLRNWKDSLKPRLI 296


>ref|NP_001028507.2| serine protease inhibitor A3F [Mus musculus].
          Length = 445

 Score =  243 bits (621), Expect(2) = 6e-71
 Identities = 122/245 (49%), Positives = 169/245 (68%)
 Frame = +2

Query: 140 PADDLASKTVTLKGQIKKLPAHNTAVVSSNTDFAFSLYKQLVSLDPSKNVIFSPLSVSIA 319
           P   L   T   + Q       +  + SSNTDFAFSLYK+LV  +P +NV+FSP S+  A
Sbjct: 12  PDVTLGRNTAVREVQENITSVDSLTLASSNTDFAFSLYKELVLKNPDENVVFSPFSICTA 71

Query: 320 LAFLSLGARGPTLIELLEGLKFNLTKTPEAEIHQGFQHLLRALSQPSNLLQLNVGNAMFV 499
           LA LSLGA+  TL E+LEGLKFNLT+TPE +IHQGF++LL  LSQP N +Q++ G+A+F+
Sbjct: 72  LALLSLGAKSNTLKEILEGLKFNLTETPEPDIHQGFRYLLDLLSQPGNQVQISTGSALFI 131

Query: 500 DERLKLLDKFVQDAHELYFSEAFSISFKDSDAAIEFINNYVKNKTKGKIVDLFKQLSPDT 679
           ++ L++L +F + A  LY +EAF+  F+    A + IN+YV N T+GKI +L   L   T
Sbjct: 132 EKHLQILAEFKEKARALYQAEAFTADFQQPLEATKLINDYVSNHTQGKIKELISDLDKRT 191

Query: 680 VLVLVNCIYFKAKWKMPFHPSFTTEADFHVSKNRTVRVPMMGITGRIVPYCMDQELACSV 859
           ++VLVN IYFK KW+MPF P  T +++F++ +NR+V+VPMM I     PY  D+EL+C+V
Sbjct: 192 LMVLVNYIYFKGKWEMPFDPDDTCKSEFYLDENRSVKVPMMKINNLTTPYFRDEELSCTV 251

Query: 860 VELPY 874
           VEL Y
Sbjct: 252 VELKY 256



 Score = 43.1 bits (100), Expect(2) = 6e-71
 Identities = 19/34 (55%), Positives = 24/34 (70%)
 Frame = +1

Query: 892 LFILSDDGMMEDVGAKLLPDTLMRWRDSLQPRRI 993
           +FIL D G M+ V A L P+TL  W+DSL+PR I
Sbjct: 263 MFILPDQGKMQQVEASLQPETLRNWKDSLKPRLI 296


>ref|NP_001161767.1| serine protease inhibitor A3F [Mus musculus].
          Length = 445

 Score =  243 bits (621), Expect(2) = 6e-71
 Identities = 122/245 (49%), Positives = 169/245 (68%)
 Frame = +2

Query: 140 PADDLASKTVTLKGQIKKLPAHNTAVVSSNTDFAFSLYKQLVSLDPSKNVIFSPLSVSIA 319
           P   L   T   + Q       +  + SSNTDFAFSLYK+LV  +P +NV+FSP S+  A
Sbjct: 12  PDVTLGRNTAVREVQENITSVDSLTLASSNTDFAFSLYKELVLKNPDENVVFSPFSICTA 71

Query: 320 LAFLSLGARGPTLIELLEGLKFNLTKTPEAEIHQGFQHLLRALSQPSNLLQLNVGNAMFV 499
           LA LSLGA+  TL E+LEGLKFNLT+TPE +IHQGF++LL  LSQP N +Q++ G+A+F+
Sbjct: 72  LALLSLGAKSNTLKEILEGLKFNLTETPEPDIHQGFRYLLDLLSQPGNQVQISTGSALFI 131

Query: 500 DERLKLLDKFVQDAHELYFSEAFSISFKDSDAAIEFINNYVKNKTKGKIVDLFKQLSPDT 679
           ++ L++L +F + A  LY +EAF+  F+    A + IN+YV N T+GKI +L   L   T
Sbjct: 132 EKHLQILAEFKEKARALYQAEAFTADFQQPLEATKLINDYVSNHTQGKIKELISDLDKRT 191

Query: 680 VLVLVNCIYFKAKWKMPFHPSFTTEADFHVSKNRTVRVPMMGITGRIVPYCMDQELACSV 859
           ++VLVN IYFK KW+MPF P  T +++F++ +NR+V+VPMM I     PY  D+EL+C+V
Sbjct: 192 LMVLVNYIYFKGKWEMPFDPDDTCKSEFYLDENRSVKVPMMKINNLTTPYFRDEELSCTV 251

Query: 860 VELPY 874
           VEL Y
Sbjct: 252 VELKY 256



 Score = 43.1 bits (100), Expect(2) = 6e-71
 Identities = 19/34 (55%), Positives = 24/34 (70%)
 Frame = +1

Query: 892 LFILSDDGMMEDVGAKLLPDTLMRWRDSLQPRRI 993
           +FIL D G M+ V A L P+TL  W+DSL+PR I
Sbjct: 263 MFILPDQGKMQQVEASLQPETLRNWKDSLKPRLI 296


>ref|NP_033278.2| serine protease inhibitor A3N precursor [Mus musculus].
          Length = 418

 Score =  239 bits (611), Expect(2) = 1e-69
 Identities = 121/252 (48%), Positives = 168/252 (66%)
 Frame = +2

Query: 119 CSRVHCLPADDLASKTVTLKGQIKKLPAHNTAVVSSNTDFAFSLYKQLVSLDPSKNVIFS 298
           C  V C P   L       +         +  + S NTDFAFSLYK+LV  +P KN++FS
Sbjct: 15  CPAVLCFPDGTLGMDAAVQEDHDNGTQLDSLTLASINTDFAFSLYKELVLKNPDKNIVFS 74

Query: 299 PLSVSIALAFLSLGARGPTLIELLEGLKFNLTKTPEAEIHQGFQHLLRALSQPSNLLQLN 478
           PLS+S ALA +SLGA+G TL E+LEGLKFNLT+T EA+IHQGF HLL+ L+QP + +Q++
Sbjct: 75  PLSISAALAVMSLGAKGNTLEEILEGLKFNLTETSEADIHQGFGHLLQRLNQPKDQVQIS 134

Query: 479 VGNAMFVDERLKLLDKFVQDAHELYFSEAFSISFKDSDAAIEFINNYVKNKTKGKIVDLF 658
            G+A+F+++R ++L +F + A  LY +EAF+  F+    A + IN+YV+ +T+G I +L 
Sbjct: 135 TGSALFIEKRQQILTEFQEKARALYQAEAFTADFQQPRQAKKLINDYVRKQTQGMIKELV 194

Query: 659 KQLSPDTVLVLVNCIYFKAKWKMPFHPSFTTEADFHVSKNRTVRVPMMGITGRIVPYCMD 838
             L   T++VLVN IYFKAKWK+PF P  T +++F+  K R V VPMM +     PY  D
Sbjct: 195 SDLDKRTLMVLVNYIYFKAKWKVPFDPLDTFKSEFYAGKRRPVIVPMMSMEDLTTPYFRD 254

Query: 839 QELACSVVELPY 874
           +EL C+VVEL Y
Sbjct: 255 EELFCTVVELKY 266



 Score = 42.4 bits (98), Expect(2) = 1e-69
 Identities = 18/34 (52%), Positives = 25/34 (73%)
 Frame = +1

Query: 892 LFILSDDGMMEDVGAKLLPDTLMRWRDSLQPRRI 993
           +FIL D G M+ V A L P+TL +W++SL+PR I
Sbjct: 273 MFILPDQGKMQQVEASLQPETLRKWKNSLKPRMI 306


>ref|NP_001186869.1| serine (or cysteine) peptidase inhibitor, clade A, member 3I [Mus
           musculus].
          Length = 408

 Score =  237 bits (604), Expect(2) = 2e-68
 Identities = 119/220 (54%), Positives = 159/220 (72%)
 Frame = +2

Query: 215 VVSSNTDFAFSLYKQLVSLDPSKNVIFSPLSVSIALAFLSLGARGPTLIELLEGLKFNLT 394
           V SSNTDFAFSLY++LV  +P +NV+FSP S+  ALA LSLGA+  TL E+LEGLKFNLT
Sbjct: 37  VASSNTDFAFSLYRKLVLKNPDENVVFSPFSIFTALALLSLGAKSNTLKEILEGLKFNLT 96

Query: 395 KTPEAEIHQGFQHLLRALSQPSNLLQLNVGNAMFVDERLKLLDKFVQDAHELYFSEAFSI 574
           +TPE +IHQGF++LL  LSQP + +Q++ G+A+FV++ L++L +F + A  LY +EAF+ 
Sbjct: 97  ETPEPDIHQGFRYLLDLLSQPGDQVQISTGSALFVEKHLQILAEFKEKARALYQAEAFTA 156

Query: 575 SFKDSDAAIEFINNYVKNKTKGKIVDLFKQLSPDTVLVLVNCIYFKAKWKMPFHPSFTTE 754
            F     A + IN+YV N+T+GKI +L   L   T++VLVN IYFK KWKMPF P  T  
Sbjct: 157 DFLQPCQAKKLINDYVSNQTQGKIKELISDLDKSTLMVLVNYIYFKGKWKMPFDPRDTFN 216

Query: 755 ADFHVSKNRTVRVPMMGITGRIVPYCMDQELACSVVELPY 874
           + F++ + R+V+VPMM I     PY  D EL+CSVVEL Y
Sbjct: 217 SKFYLDEKRSVKVPMMKIEELTTPYFRDDELSCSVVELKY 256



 Score = 41.6 bits (96), Expect(2) = 2e-68
 Identities = 18/35 (51%), Positives = 25/35 (71%)
 Frame = +1

Query: 892 LFILSDDGMMEDVGAKLLPDTLMRWRDSLQPRRIT 996
           LFIL D G M+ V   L P+TL +W++SL+P RI+
Sbjct: 263 LFILPDQGKMQQVETSLHPETLRKWKNSLKPSRIS 297


>ref|XP_003085882.1| PREDICTED: serine protease inhibitor A3F isoform 1 [Mus musculus].
          Length = 408

 Score =  237 bits (604), Expect(2) = 2e-68
 Identities = 119/220 (54%), Positives = 159/220 (72%)
 Frame = +2

Query: 215 VVSSNTDFAFSLYKQLVSLDPSKNVIFSPLSVSIALAFLSLGARGPTLIELLEGLKFNLT 394
           V SSNTDFAFSLY++LV  +P +NV+FSP S+  ALA LSLGA+  TL E+LEGLKFNLT
Sbjct: 37  VASSNTDFAFSLYRKLVLKNPDENVVFSPFSIFTALALLSLGAKSNTLKEILEGLKFNLT 96

Query: 395 KTPEAEIHQGFQHLLRALSQPSNLLQLNVGNAMFVDERLKLLDKFVQDAHELYFSEAFSI 574
           +TPE +IHQGF++LL  LSQP + +Q++ G+A+FV++ L++L +F + A  LY +EAF+ 
Sbjct: 97  ETPEPDIHQGFRYLLDLLSQPGDQVQISTGSALFVEKHLQILAEFKEKARALYQAEAFTA 156

Query: 575 SFKDSDAAIEFINNYVKNKTKGKIVDLFKQLSPDTVLVLVNCIYFKAKWKMPFHPSFTTE 754
            F     A + IN+YV N+T+GKI +L   L   T++VLVN IYFK KWKMPF P  T  
Sbjct: 157 DFLQPCQAKKLINDYVSNQTQGKIKELISDLDKSTLMVLVNYIYFKGKWKMPFDPRDTFN 216

Query: 755 ADFHVSKNRTVRVPMMGITGRIVPYCMDQELACSVVELPY 874
           + F++ + R+V+VPMM I     PY  D EL+CSVVEL Y
Sbjct: 217 SKFYLDEKRSVKVPMMKIEELTTPYFRDDELSCSVVELKY 256



 Score = 41.6 bits (96), Expect(2) = 2e-68
 Identities = 18/35 (51%), Positives = 25/35 (71%)
 Frame = +1

Query: 892 LFILSDDGMMEDVGAKLLPDTLMRWRDSLQPRRIT 996
           LFIL D G M+ V   L P+TL +W++SL+P RI+
Sbjct: 263 LFILPDQGKMQQVETSLHPETLRKWKNSLKPSRIS 297


>ref|XP_003085883.1| PREDICTED: serine protease inhibitor A3F isoform 2 [Mus musculus].
          Length = 408

 Score =  237 bits (604), Expect(2) = 2e-68
 Identities = 119/220 (54%), Positives = 159/220 (72%)
 Frame = +2

Query: 215 VVSSNTDFAFSLYKQLVSLDPSKNVIFSPLSVSIALAFLSLGARGPTLIELLEGLKFNLT 394
           V SSNTDFAFSLY++LV  +P +NV+FSP S+  ALA LSLGA+  TL E+LEGLKFNLT
Sbjct: 37  VASSNTDFAFSLYRKLVLKNPDENVVFSPFSIFTALALLSLGAKSNTLKEILEGLKFNLT 96

Query: 395 KTPEAEIHQGFQHLLRALSQPSNLLQLNVGNAMFVDERLKLLDKFVQDAHELYFSEAFSI 574
           +TPE +IHQGF++LL  LSQP + +Q++ G+A+FV++ L++L +F + A  LY +EAF+ 
Sbjct: 97  ETPEPDIHQGFRYLLDLLSQPGDQVQISTGSALFVEKHLQILAEFKEKARALYQAEAFTA 156

Query: 575 SFKDSDAAIEFINNYVKNKTKGKIVDLFKQLSPDTVLVLVNCIYFKAKWKMPFHPSFTTE 754
            F     A + IN+YV N+T+GKI +L   L   T++VLVN IYFK KWKMPF P  T  
Sbjct: 157 DFLQPCQAKKLINDYVSNQTQGKIKELISDLDKSTLMVLVNYIYFKGKWKMPFDPRDTFN 216

Query: 755 ADFHVSKNRTVRVPMMGITGRIVPYCMDQELACSVVELPY 874
           + F++ + R+V+VPMM I     PY  D EL+CSVVEL Y
Sbjct: 217 SKFYLDEKRSVKVPMMKIEELTTPYFRDDELSCSVVELKY 256



 Score = 41.6 bits (96), Expect(2) = 2e-68
 Identities = 18/35 (51%), Positives = 25/35 (71%)
 Frame = +1

Query: 892 LFILSDDGMMEDVGAKLLPDTLMRWRDSLQPRRIT 996
           LFIL D G M+ V   L P+TL +W++SL+P RI+
Sbjct: 263 LFILPDQGKMQQVETSLHPETLRKWKNSLKPSRIS 297


>ref|NP_033279.2| serine protease inhibitor A3M precursor [Mus musculus].
          Length = 418

 Score =  238 bits (608), Expect(2) = 5e-68
 Identities = 121/252 (48%), Positives = 169/252 (67%)
 Frame = +2

Query: 119 CSRVHCLPADDLASKTVTLKGQIKKLPAHNTAVVSSNTDFAFSLYKQLVSLDPSKNVIFS 298
           C  V C   D      +  K Q    P  +  + S NTDFAFSLYK++   +P KN++FS
Sbjct: 15  CPTVLCFSDDTWGIDILLHKNQESGTPDDSLTLASINTDFAFSLYKKMALKNPDKNIVFS 74

Query: 299 PLSVSIALAFLSLGARGPTLIELLEGLKFNLTKTPEAEIHQGFQHLLRALSQPSNLLQLN 478
           PLS+S ALA +SLGA+G TL E+LEGLKFNLT+T EA+IHQGF HLL+ LSQP +  Q+N
Sbjct: 75  PLSISAALALVSLGAKGNTLEEILEGLKFNLTETSEADIHQGFGHLLQRLSQPEDQDQIN 134

Query: 479 VGNAMFVDERLKLLDKFVQDAHELYFSEAFSISFKDSDAAIEFINNYVKNKTKGKIVDLF 658
           +GNAMF+++ L++L +F +    LY +EAF+  F+    A + IN+YV N+T+G I  L 
Sbjct: 135 IGNAMFIEKDLQILAEFHEKTRALYQTEAFTADFQQPTEATKLINDYVSNQTQGMIKKLI 194

Query: 659 KQLSPDTVLVLVNCIYFKAKWKMPFHPSFTTEADFHVSKNRTVRVPMMGITGRIVPYCMD 838
            +L   T++VLVN IYFK KWK+ F P  T E++F++ + R+V+VPMM +      +  D
Sbjct: 195 SELDDRTLMVLVNYIYFKGKWKISFDPQDTFESEFYLDEKRSVKVPMMKMKFLTTRHFRD 254

Query: 839 QELACSVVELPY 874
           +EL+CSV+EL Y
Sbjct: 255 EELSCSVLELKY 266



 Score = 38.5 bits (88), Expect(2) = 5e-68
 Identities = 18/34 (52%), Positives = 23/34 (67%)
 Frame = +1

Query: 892 LFILSDDGMMEDVGAKLLPDTLMRWRDSLQPRRI 993
           LFIL D G M+ V A L P+TL +W  SL+ R+I
Sbjct: 273 LFILPDQGRMQQVEASLQPETLRKWWKSLKTRKI 306


>ref|NP_033277.1| serine protease inhibitor A3G [Mus musculus].
          Length = 440

 Score =  231 bits (590), Expect(2) = 4e-67
 Identities = 119/245 (48%), Positives = 166/245 (67%)
 Frame = +2

Query: 140 PADDLASKTVTLKGQIKKLPAHNTAVVSSNTDFAFSLYKQLVSLDPSKNVIFSPLSVSIA 319
           P   L   T   + Q       +  +VSSNTDFAFSLY++LV  +P +NV+FSP S+  A
Sbjct: 12  PDVTLGRNTAVREVQENVTSVDSLTLVSSNTDFAFSLYRKLVLKNPDENVVFSPFSICTA 71

Query: 320 LAFLSLGARGPTLIELLEGLKFNLTKTPEAEIHQGFQHLLRALSQPSNLLQLNVGNAMFV 499
           LA LSLGA+  TL E+LEGLKFNLT+TPE +IHQGF++LL  LSQP N +Q++ G+A+F+
Sbjct: 72  LALLSLGAKSNTLKEILEGLKFNLTETPEPDIHQGFRYLLDLLSQPGNQVQISTGSALFI 131

Query: 500 DERLKLLDKFVQDAHELYFSEAFSISFKDSDAAIEFINNYVKNKTKGKIVDLFKQLSPDT 679
           ++ L++L +F + A  LY +EAF+  F+    A + IN+YV N T+GKI +L   L   T
Sbjct: 132 EKHLQILAEFKEKARALYQAEAFTADFQQPLKATKLINDYVSNHTQGKIKELISGLKEST 191

Query: 680 VLVLVNCIYFKAKWKMPFHPSFTTEADFHVSKNRTVRVPMMGITGRIVPYCMDQELACSV 859
           ++VLVN IYFK KWK PF P+ T +++F++ + R+V V MM       PY  D+EL+C+V
Sbjct: 192 LMVLVNYIYFKGKWKNPFDPNDTFKSEFYLDEKRSVIVSMMKTGYLTTPYFRDEELSCTV 251

Query: 860 VELPY 874
           VEL Y
Sbjct: 252 VELKY 256



 Score = 42.4 bits (98), Expect(2) = 4e-67
 Identities = 18/34 (52%), Positives = 25/34 (73%)
 Frame = +1

Query: 892 LFILSDDGMMEDVGAKLLPDTLMRWRDSLQPRRI 993
           +FIL D G M+ V A L P+TL +W++SL+PR I
Sbjct: 263 MFILPDQGRMQQVEASLQPETLRKWKNSLKPRMI 296


  Database: RefSeq49_MP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 15,617,559
  Number of sequences in database:  30,036
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 33,806,294
Number of extensions: 950309
Number of successful extensions: 5359
Number of sequences better than 1.0e-05: 79
Number of HSP's gapped: 5206
Number of HSP's successfully gapped: 101
Length of query: 333
Length of database: 15,617,559
Length adjustment: 102
Effective length of query: 231
Effective length of database: 12,553,887
Effective search space: 2899947897
Effective search space used: 2899947897
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)

Search to RefSeqSP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-000822
         (999 letters)

Database: RefSeq49_SP.fasta 
           24,897 sequences; 11,343,932 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_001928857.3| PREDICTED: serpin A3-8 [Sus scrofa].              476   e-145
Alignment   gi|XP_001928879.1| PREDICTED: serpin A3-6 [Sus scrofa].              412   e-126
Alignment   gi|NP_998952.1| alpha-1-antichymotrypsin 2 [Sus scrofa].             397   e-120
Alignment   gi|XP_001928637.3| PREDICTED: serpin A3-5 [Sus scrofa].              382   e-118
Alignment   gi|XP_003356842.1| PREDICTED: serpin A3-6 [Sus scrofa].              311   4e-85
Alignment   gi|XP_003356841.1| PREDICTED: serpin A3-8-like, partial [Sus sc...   266   1e-71
Alignment   gi|NP_999560.1| alpha-1-antitrypsin precursor [Sus scrofa].          217   7e-57
Alignment   gi|NP_998977.1| corticosteroid-binding globulin precursor [Sus ...   197   4e-53
Alignment   gi|XP_003356840.1| PREDICTED: LOW QUALITY PROTEIN: kallistatin-...   187   1e-51
Alignment   gi|XP_003356835.1| PREDICTED: serpin A11 [Sus scrofa].               190   3e-51

>ref|XP_001928857.3| PREDICTED: serpin A3-8 [Sus scrofa].
          Length = 423

 Score =  476 bits (1226), Expect(2) = e-145
 Identities = 242/271 (89%), Positives = 249/271 (91%)
 Frame = +2

Query: 62  MRAEGMSXXXXXXXXXXXXCSRVHCLPADDLASKTVTLKGQIKKLPAHNTAVVSSNTDFA 241
           MRAEGMS            CSRVHC+PADDLASKTVTLKGQI KLPAHNTAVVSSNTDFA
Sbjct: 1   MRAEGMSLFLALGLLVAGLCSRVHCVPADDLASKTVTLKGQITKLPAHNTAVVSSNTDFA 60

Query: 242 FSLYKQLVSLDPSKNVIFSPLSVSIALAFLSLGARGPTLIELLEGLKFNLTKTPEAEIHQ 421
           FSLYKQLVSLDP+KNVIFSPLSVSIALAFLSLGARG TL ELLEGLKFNLTKTPEAEIHQ
Sbjct: 61  FSLYKQLVSLDPNKNVIFSPLSVSIALAFLSLGARGSTLTELLEGLKFNLTKTPEAEIHQ 120

Query: 422 GFQHLLRALSQPSNLLQLNVGNAMFVDERLKLLDKFVQDAHELYFSEAFSISFKDSDAAI 601
           GFQHLLRALSQPSNLLQLNVGNAMFVDERLKLLDKFVQDA ELYFSE FSISFKDSDAA+
Sbjct: 121 GFQHLLRALSQPSNLLQLNVGNAMFVDERLKLLDKFVQDARELYFSEVFSISFKDSDAAV 180

Query: 602 EFINNYVKNKTKGKIVDLFKQLSPDTVLVLVNCIYFKAKWKMPFHPSFTTEADFHVSKNR 781
           EFINNYVKNKTKGKIVDLFKQLSPDTVLVLVNCIYFKAKWK PF PSFTTEADFHVSKNR
Sbjct: 181 EFINNYVKNKTKGKIVDLFKQLSPDTVLVLVNCIYFKAKWKTPFDPSFTTEADFHVSKNR 240

Query: 782 TVRVPMMGITGRIVPYCMDQELACSVVELPY 874
           TVRVPMMGI+GR +PY  D+ELAC+VVELPY
Sbjct: 241 TVRVPMMGISGRTLPYFRDEELACTVVELPY 271



 Score = 56.2 bits (134), Expect(2) = e-145
 Identities = 28/44 (63%), Positives = 31/44 (70%)
 Frame = +1

Query: 868 PVHRHDCTLFILSDDGMMEDVGAKLLPDTLMRWRDSLQPRRITA 999
           P   +D  LFIL DDG M  V A+LLP+TL RWRDSL  RRITA
Sbjct: 270 PYTSNDSALFILPDDGRMAAVEAQLLPETLRRWRDSLHQRRITA 313


>ref|XP_001928879.1| PREDICTED: serpin A3-6 [Sus scrofa].
          Length = 423

 Score =  412 bits (1058), Expect(2) = e-126
 Identities = 213/271 (78%), Positives = 230/271 (84%)
 Frame = +2

Query: 62  MRAEGMSXXXXXXXXXXXXCSRVHCLPADDLASKTVTLKGQIKKLPAHNTAVVSSNTDFA 241
           MRAEGMS            CSRVHC+PADDLASK VTLKGQI KLPAHNTAVVSSNTDFA
Sbjct: 1   MRAEGMSLFLALGLLVAGLCSRVHCVPADDLASKIVTLKGQITKLPAHNTAVVSSNTDFA 60

Query: 242 FSLYKQLVSLDPSKNVIFSPLSVSIALAFLSLGARGPTLIELLEGLKFNLTKTPEAEIHQ 421
           FSLYKQLVSLDPSKNVIFSPLSVSIALAFLSLGA+G TL ELLEGLKFNLTKTPEAEIHQ
Sbjct: 61  FSLYKQLVSLDPSKNVIFSPLSVSIALAFLSLGAQGSTLTELLEGLKFNLTKTPEAEIHQ 120

Query: 422 GFQHLLRALSQPSNLLQLNVGNAMFVDERLKLLDKFVQDAHELYFSEAFSISFKDSDAAI 601
           GFQHLL+ALSQPSNLLQLNVGNAMFVDE LKLLDKFVQDA ELY SEAF  +F+D +AA 
Sbjct: 121 GFQHLLQALSQPSNLLQLNVGNAMFVDEHLKLLDKFVQDARELYHSEAFPTNFQDLEAAR 180

Query: 602 EFINNYVKNKTKGKIVDLFKQLSPDTVLVLVNCIYFKAKWKMPFHPSFTTEADFHVSKNR 781
             IN+YVKNKT+GKIV+L K+L P TV VLVN IYFKA+W   F P+ TTEADF+VSKN+
Sbjct: 181 RLINDYVKNKTEGKIVELIKKLFPRTVAVLVNYIYFKAQWMTHFDPNLTTEADFYVSKNK 240

Query: 782 TVRVPMMGITGRIVPYCMDQELACSVVELPY 874
           TV+VPMMGI    VPY  D+ELAC+VVELPY
Sbjct: 241 TVKVPMMGIKNLTVPYFRDEELACTVVELPY 271



 Score = 58.2 bits (139), Expect(2) = e-126
 Identities = 29/44 (65%), Positives = 31/44 (70%)
 Frame = +1

Query: 868 PVHRHDCTLFILSDDGMMEDVGAKLLPDTLMRWRDSLQPRRITA 999
           P   +D TLFIL DDG M  V A LLP+ L RWRDSLQPRRI A
Sbjct: 270 PYTSNDSTLFILPDDGRMAAVEANLLPEMLRRWRDSLQPRRIDA 313


>ref|NP_998952.1| alpha-1-antichymotrypsin 2 [Sus scrofa].
          Length = 415

 Score =  397 bits (1020), Expect(2) = e-120
 Identities = 200/252 (79%), Positives = 220/252 (87%)
 Frame = +2

Query: 119 CSRVHCLPADDLASKTVTLKGQIKKLPAHNTAVVSSNTDFAFSLYKQLVSLDPSKNVIFS 298
           CSRVHC+PADD ASK VTLK QIKKLPAHNTAVVSSNTDFAFSLYKQL   +P +NVIFS
Sbjct: 15  CSRVHCVPADDPASKIVTLKDQIKKLPAHNTAVVSSNTDFAFSLYKQLALTNPHENVIFS 74

Query: 299 PLSVSIALAFLSLGARGPTLIELLEGLKFNLTKTPEAEIHQGFQHLLRALSQPSNLLQLN 478
           PLSVS+ALAFLSLGARGPTL ELLEGLKFNLTKTPEAEIHQGFQHLL  L + SNLLQL 
Sbjct: 75  PLSVSMALAFLSLGARGPTLTELLEGLKFNLTKTPEAEIHQGFQHLLSTLDRSSNLLQLR 134

Query: 479 VGNAMFVDERLKLLDKFVQDAHELYFSEAFSISFKDSDAAIEFINNYVKNKTKGKIVDLF 658
           +GNAMF+DE+L+LLDKFVQDAHELY SEAF  +F+D +AA   IN+YVKNKT+GKIVDLF
Sbjct: 135 LGNAMFIDEQLELLDKFVQDAHELYHSEAFPTNFQDLEAARRLINDYVKNKTEGKIVDLF 194

Query: 659 KQLSPDTVLVLVNCIYFKAKWKMPFHPSFTTEADFHVSKNRTVRVPMMGITGRIVPYCMD 838
           K+L P T +VLVN IYFKAKWK PF+P+ TTEADFHVSKNRTVRVPMMGI    VPY  D
Sbjct: 195 KKLDPLTKVVLVNYIYFKAKWKTPFNPNLTTEADFHVSKNRTVRVPMMGIRALTVPYFRD 254

Query: 839 QELACSVVELPY 874
           +ELAC+VVELPY
Sbjct: 255 EELACTVVELPY 266



 Score = 53.9 bits (128), Expect(2) = e-120
 Identities = 27/42 (64%), Positives = 29/42 (69%)
 Frame = +1

Query: 868 PVHRHDCTLFILSDDGMMEDVGAKLLPDTLMRWRDSLQPRRI 993
           P   +D  LFIL DDG M  V AKLLP+TL RWRD LQPR I
Sbjct: 265 PYTSNDSALFILPDDGRMAAVEAKLLPETLRRWRDFLQPRWI 306


>ref|XP_001928637.3| PREDICTED: serpin A3-5 [Sus scrofa].
          Length = 393

 Score =  382 bits (981), Expect(2) = e-118
 Identities = 203/291 (69%), Positives = 224/291 (76%)
 Frame = +2

Query: 2   ALRAGSGSGSTQRIPLCEADMRAEGMSXXXXXXXXXXXXCSRVHCLPADDLASKTVTLKG 181
           ALRAG GSGSTQRI LCEA                            ADD ASK VTLK 
Sbjct: 40  ALRAGGGSGSTQRILLCEA----------------------------ADDPASKIVTLKD 71

Query: 182 QIKKLPAHNTAVVSSNTDFAFSLYKQLVSLDPSKNVIFSPLSVSIALAFLSLGARGPTLI 361
           QI+KLPAHNTAVVSSNTDFAFSLYKQL   +P +NVIFSPLSVS+ALAFLSLGARGPTL 
Sbjct: 72  QIRKLPAHNTAVVSSNTDFAFSLYKQLALTNPHENVIFSPLSVSMALAFLSLGARGPTLT 131

Query: 362 ELLEGLKFNLTKTPEAEIHQGFQHLLRALSQPSNLLQLNVGNAMFVDERLKLLDKFVQDA 541
           ELLEGLKFNLTKTPEAEIHQGFQHLL  L + SNLLQL +GNAMF+DE+L+LLDKFVQDA
Sbjct: 132 ELLEGLKFNLTKTPEAEIHQGFQHLLSTLDRSSNLLQLRLGNAMFIDEQLELLDKFVQDA 191

Query: 542 HELYFSEAFSISFKDSDAAIEFINNYVKNKTKGKIVDLFKQLSPDTVLVLVNCIYFKAKW 721
           HELY SEAF  +F+D +AA   IN+YVKNKT+GKIVDLFK+L P T +VLVN IYFKAKW
Sbjct: 192 HELYHSEAFPTNFQDLEAARRLINDYVKNKTEGKIVDLFKKLDPLTKVVLVNYIYFKAKW 251

Query: 722 KMPFHPSFTTEADFHVSKNRTVRVPMMGITGRIVPYCMDQELACSVVELPY 874
           K PF P  T E+ FHVSKNRTV+VPMM + G   PY  D+ELAC+VVELPY
Sbjct: 252 KTPFDPEHTIESTFHVSKNRTVKVPMMSLRGLETPYFRDEELACTVVELPY 302



 Score = 60.5 bits (145), Expect(2) = e-118
 Identities = 30/44 (68%), Positives = 32/44 (72%)
 Frame = +1

Query: 868 PVHRHDCTLFILSDDGMMEDVGAKLLPDTLMRWRDSLQPRRITA 999
           P   +D  LFIL DDG M  V AKLLP+TL RWRDSLQPRRI A
Sbjct: 301 PYTSNDSALFILPDDGRMAAVEAKLLPETLRRWRDSLQPRRIDA 344


>ref|XP_003356842.1| PREDICTED: serpin A3-6 [Sus scrofa].
          Length = 345

 Score =  311 bits (797), Expect = 4e-85
 Identities = 161/217 (74%), Positives = 180/217 (82%)
 Frame = +2

Query: 62  MRAEGMSXXXXXXXXXXXXCSRVHCLPADDLASKTVTLKGQIKKLPAHNTAVVSSNTDFA 241
           MRAEGMS            CSRVHC+PADDLASK VTLK QIKKLP HNTAVVSSNTDFA
Sbjct: 1   MRAEGMSLFLALGLLVAGLCSRVHCVPADDLASKIVTLKDQIKKLPVHNTAVVSSNTDFA 60

Query: 242 FSLYKQLVSLDPSKNVIFSPLSVSIALAFLSLGARGPTLIELLEGLKFNLTKTPEAEIHQ 421
           FSLYKQL   +  KN+IFSPLSVS+ALAFLSLGARGPTL ELLEGLKFN+T+TPEAEIHQ
Sbjct: 61  FSLYKQLSLTNRHKNIIFSPLSVSMALAFLSLGARGPTLTELLEGLKFNVTETPEAEIHQ 120

Query: 422 GFQHLLRALSQPSNLLQLNVGNAMFVDERLKLLDKFVQDAHELYFSEAFSISFKDSDAAI 601
           GFQHLLR L++PSNLLQL +GNAMF+DE+L+LLDKFVQDA ELY SEAF  +F+D +AA 
Sbjct: 121 GFQHLLRTLNRPSNLLQLRLGNAMFIDEQLELLDKFVQDARELYHSEAFPTNFQDLEAAR 180

Query: 602 EFINNYVKNKTKGKIVDLFKQLSPDTVLVLVNCIYFK 712
             IN+YVKNKT+GKIV+L K+L P T  VLVN IYFK
Sbjct: 181 RLINDYVKNKTEGKIVELIKRLIPVTEAVLVNYIYFK 217


>ref|XP_003356841.1| PREDICTED: serpin A3-8-like, partial [Sus scrofa].
          Length = 201

 Score =  266 bits (681), Expect = 1e-71
 Identities = 141/194 (72%), Positives = 156/194 (80%)
 Frame = +2

Query: 128 VHCLPADDLASKTVTLKGQIKKLPAHNTAVVSSNTDFAFSLYKQLVSLDPSKNVIFSPLS 307
           VHC+P      +  T   Q  + P    A+V SNTDFAFSLYKQLVSLDPSKNVIFSPLS
Sbjct: 7   VHCVPEGKPDPENGTPNDQHSRTPVDPHAIVPSNTDFAFSLYKQLVSLDPSKNVIFSPLS 66

Query: 308 VSIALAFLSLGARGPTLIELLEGLKFNLTKTPEAEIHQGFQHLLRALSQPSNLLQLNVGN 487
           VSIALAFLSLGARGPTL ELLEGLKFNLTKTPEAEIHQGFQHLL+ALSQPSNLLQLNVGN
Sbjct: 67  VSIALAFLSLGARGPTLTELLEGLKFNLTKTPEAEIHQGFQHLLQALSQPSNLLQLNVGN 126

Query: 488 AMFVDERLKLLDKFVQDAHELYFSEAFSISFKDSDAAIEFINNYVKNKTKGKIVDLFKQL 667
           AMFVDE LKLLD+F QDA   + S+ FS +FKD  AA+ FIN+YVKNKTKGKI  LF + 
Sbjct: 127 AMFVDEHLKLLDEFRQDAQAKFASDVFSTNFKDPGAAVVFINDYVKNKTKGKIPKLFDEH 186

Query: 668 SPDTVLVLVNCIYF 709
           +  +V+VLVN IYF
Sbjct: 187 ATFSVMVLVNYIYF 200


>ref|NP_999560.1| alpha-1-antitrypsin precursor [Sus scrofa].
          Length = 421

 Score =  217 bits (553), Expect = 7e-57
 Identities = 105/194 (54%), Positives = 139/194 (71%)
 Frame = +2

Query: 233 DFAFSLYKQLVSLDPSKNVIFSPLSVSIALAFLSLGARGPTLIELLEGLKFNLTKTPEAE 412
           DFAFSLY+Q+     + N+  SP++++ A A LSLG +G T  E+LEGL+FNLT+  EAE
Sbjct: 59  DFAFSLYRQVARQSNTSNIFLSPVTIARAFAMLSLGTKGATHAEILEGLQFNLTEKAEAE 118

Query: 413 IHQGFQHLLRALSQPSNLLQLNVGNAMFVDERLKLLDKFVQDAHELYFSEAFSISFKDSD 592
           IH+GFQHLL  L+QP N LQL  GN +F+DE+ KL+ KF++D   LY SEAFSI+F+D++
Sbjct: 119 IHEGFQHLLHTLNQPDNQLQLTTGNGLFIDEKAKLVPKFLEDVKNLYHSEAFSINFRDTE 178

Query: 593 AAIEFINNYVKNKTKGKIVDLFKQLSPDTVLVLVNCIYFKAKWKMPFHPSFTTEADFHVS 772
            A + IN+YV+  ++GKIVDL  +L  DTV  LVN I+FK KW+ PF    TTE DFHV 
Sbjct: 179 EAKKCINDYVEKGSQGKIVDLVDELDKDTVFALVNYIFFKGKWEKPFEVEQTTEEDFHVD 238

Query: 773 KNRTVRVPMMGITG 814
           +  TV+VPMM   G
Sbjct: 239 EETTVKVPMMNRLG 252


>ref|NP_998977.1| corticosteroid-binding globulin precursor [Sus scrofa].
          Length = 406

 Score =  197 bits (500), Expect(2) = 4e-53
 Identities = 104/217 (47%), Positives = 139/217 (64%)
 Frame = +2

Query: 224 SNTDFAFSLYKQLVSLDPSKNVIFSPLSVSIALAFLSLGARGPTLIELLEGLKFNLTKTP 403
           +N DFAF+LYK LV+  P K+V  SP+S+S ALA LSLGA G T  +LL+GL FNLT+TP
Sbjct: 41  NNVDFAFALYKHLVASAPGKDVFLSPVSISTALAMLSLGASGYTREQLLQGLGFNLTETP 100

Query: 404 EAEIHQGFQHLLRALSQPSNLLQLNVGNAMFVDERLKLLDKFVQDAHELYFSEAFSISFK 583
           EAEIHQ FQHL   L   +   ++ +GNA+F+D  L+LL+ F   +   Y  EA +  F+
Sbjct: 101 EAEIHQDFQHLHSLLKGSNITSEMTMGNALFLDRSLELLESFSTGSKHYYGLEALAADFQ 160

Query: 584 DSDAAIEFINNYVKNKTKGKIVDLFKQLSPDTVLVLVNCIYFKAKWKMPFHPSFTTEADF 763
           D   A   IN Y+KNKT+GKIVDLF +     +L+L+N I+FK  W   F P  T E +F
Sbjct: 161 DWAGASRQINEYIKNKTQGKIVDLFLEQDSSAMLILINYIFFKGTWTHSFPPESTREENF 220

Query: 764 HVSKNRTVRVPMMGITGRIVPYCMDQELACSVVELPY 874
           +V++  TV+VPMM    R + Y  D  L C +V+L Y
Sbjct: 221 YVNETATVKVPMM-FQSRAMKYLNDSLLPCQLVQLEY 256



 Score = 29.6 bits (65), Expect(2) = 4e-53
 Identities = 15/38 (39%), Positives = 21/38 (55%)
 Frame = +1

Query: 880 HDCTLFILSDDGMMEDVGAKLLPDTLMRWRDSLQPRRI 993
           ++   FIL   G M+ V A L  DT+ RW  SL P ++
Sbjct: 259 NETAFFILPVKGEMDTVIAGLSRDTIQRWSKSLIPSQV 296


>ref|XP_003356840.1| PREDICTED: LOW QUALITY PROTEIN: kallistatin-like [Sus scrofa].
          Length = 424

 Score =  187 bits (476), Expect(2) = 1e-51
 Identities = 97/216 (44%), Positives = 134/216 (62%)
 Frame = +2

Query: 227 NTDFAFSLYKQLVSLDPSKNVIFSPLSVSIALAFLSLGARGPTLIELLEGLKFNLTKTPE 406
           NT FA   Y  +VS  P  N+ FSPLS+S A A LSLGA   +  ++LEGL FNLT+  +
Sbjct: 53  NTVFALHFYHLMVSQTPGSNIFFSPLSISAAYAMLSLGAGSLSRTQILEGLGFNLTEVSQ 112

Query: 407 AEIHQGFQHLLRALSQPSNLLQLNVGNAMFVDERLKLLDKFVQDAHELYFSEAFSISFKD 586
            + HQGFQ+LL  L  P + L++++GNA+F+   + LL  F+ D+   Y S+    +F  
Sbjct: 113 PDTHQGFQNLLHTLHLPDDRLEIHMGNALFLSPEVLLLPXFLNDSERFYESKLLHANFXK 172

Query: 587 SDAAIEFINNYVKNKTKGKIVDLFKQLSPDTVLVLVNCIYFKAKWKMPFHPSFTTEADFH 766
                + INN+VK +T+GKIVDL   LSPDT +VLVN IYFKA W+ PF+PS T   DF+
Sbjct: 173 PAGTAQLINNHVKEETQGKIVDLVSGLSPDTTMVLVNYIYFKALWEKPFNPSMTIPQDFY 232

Query: 767 VSKNRTVRVPMMGITGRIVPYCMDQELACSVVELPY 874
           V +  TV+VPMM    +   Y  D+   C+V+ + Y
Sbjct: 233 VDEVTTVKVPMMMQGPQHHWYLHDRHFPCTVLRMDY 268



 Score = 34.3 bits (77), Expect(2) = 1e-51
 Identities = 18/39 (46%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
 Frame = +1

Query: 874 HRHDCT-LFILSDDGMMEDVGAKLLPDTLMRWRDSLQPR 987
           ++ D T LFIL + G M++V   L P+ L RWR+ LQ R
Sbjct: 268 YKGDATALFILPNXGKMDEVEEVLTPEMLTRWRNLLQNR 306


>ref|XP_003356835.1| PREDICTED: serpin A11 [Sus scrofa].
          Length = 422

 Score =  190 bits (482), Expect(2) = 3e-51
 Identities = 100/227 (44%), Positives = 154/227 (67%), Gaps = 1/227 (0%)
 Frame = +2

Query: 197 PAHNTAVVSSNTDFAFSLYKQLVSLDPSKNVIFSPLSVSIALAFLSLGARGPTLIELLEG 376
           PA++  +  + TDFA  LYKQL +  P  N+ FSP+S+S  LA LSLGA+  T  ++LEG
Sbjct: 45  PAYHK-ITPTLTDFALRLYKQLAAETPG-NIFFSPVSISSTLALLSLGAQADTPTQILEG 102

Query: 377 LKFNLTKTPEAEIHQGFQHLLRALSQPSNLLQLNVGNAMFVDERLKLLDKFVQDAHELYF 556
           L FNLT+ PEA+IH+GFQ L+R L  PS+ L++ VGN++F+D++LK    F+ +  E+Y 
Sbjct: 103 LGFNLTEIPEADIHRGFQSLIRTLGLPSSKLEMKVGNSLFLDKQLKPQQHFLDNIREVYG 162

Query: 557 SEAFSISFKDSDAAIEFINNYVKNKTKGKIVDLFKQLSPDTVLVLVNCIYFKAKWKMPFH 736
           + AFS +F DS      IN+Y++ +T G++VD  ++ + DT++VL+N I+FKAKWK PF+
Sbjct: 163 ALAFSANFTDSGTTRRQINDYLRKQTYGQVVDCLEEFAQDTLMVLLNYIFFKAKWKHPFN 222

Query: 737 PSFTTEAD-FHVSKNRTVRVPMMGITGRIVPYCMDQELACSVVELPY 874
           P  T + + F V +  ++RVPMM     +  +  D E+AC+V+++ Y
Sbjct: 223 PYQTQKQESFFVDERTSLRVPMMR-QKEMHRFLYDHEVACTVLQIEY 268



 Score = 30.4 bits (67), Expect(2) = 3e-51
 Identities = 15/31 (48%), Positives = 17/31 (54%)
 Frame = +1

Query: 892 LFILSDDGMMEDVGAKLLPDTLMRWRDSLQP 984
           L IL D G M  V A L P+TL +W   L P
Sbjct: 275 LLILPDPGKMAQVEAALQPETLRKWDQLLLP 305


  Database: RefSeq49_SP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 11,343,932
  Number of sequences in database:  24,897
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 25,393,498
Number of extensions: 739614
Number of successful extensions: 4554
Number of sequences better than 1.0e-05: 38
Number of HSP's gapped: 4489
Number of HSP's successfully gapped: 52
Length of query: 333
Length of database: 11,343,932
Length adjustment: 99
Effective length of query: 234
Effective length of database: 8,879,129
Effective search space: 2077716186
Effective search space used: 2077716186
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)

Search to Sscrofa10_2

BLASTN 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-000822
         (999 letters)

Database: Sscrofa_10.2.fasta 
           4582 sequences; 2,808,509,378 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Sscrofa_Chr07                                                        1207   0.0  

>Sscrofa_Chr07 
||          Length = 134764511

 Score = 1207 bits (609), Expect = 0.0
 Identities = 645/657 (98%)
 Strand = Plus / Plus

                                                                             
Query: 57        cagacatgagggcggagggaatgtccctcttcctggctctgggcctcctggtggctgggc 116
                 ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 122963667 cagacatgagggcggagggcatgtccctcttcctggctctgggcctcctggtggctgggc 122963726

                                                                             
Query: 117       tctgctccagggtccactgcctcccagcagatgaccttgcctcaaagactgtgaccctga 176
                 |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||
Sbjct: 122963727 tctgctccagggtccactgcgtcccagcggatgaccttgcctcaaagactgtgaccctga 122963786

                                                                             
Query: 177       agggccagatcaagaagctgccagcgcacaacaccgccgtcgtctccagcaacaccgact 236
                 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122963787 agggccagatcacgaagctgccagcgcacaacaccgccgtcgtctccagcaacaccgact 122963846

                                                                             
Query: 237       tcgccttcagcctctacaagcagctggtttctttagaccccagtaagaacgtcatcttct 296
                 |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 122963847 tcgccttcagcctctacaagcagctggtttctttagaccccaataagaacgtcatcttct 122963906

                                                                             
Query: 297       ccccgctgagcgtctccatagccttggccttcctgtctctgggggcccgaggccccaccc 356
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 122963907 ccccgctgagcgtctccatagccttggccttcctgtctctgggggcccgaggctccaccc 122963966

                                                                             
Query: 357       tgatagagctcctggaaggcctcaagttcaacctcacaaagacccccgaggcagaaatcc 416
                 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122963967 tgacagagctcctggaaggcctcaagttcaacctcacaaagacccccgaggcagaaatcc 122964026

                                                                             
Query: 417       accagggcttccagcacctcctgcgggccctcagccaacccagcaacctgctgcagctga 476
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122964027 accagggcttccagcacctcctgcgggccctcagccaacccagcaacctgctgcagctga 122964086

                                                                             
Query: 477       acgtgggcaacgccatgttcgtggatgagcggctgaagctgctggacaagttcgtccaag 536
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122964087 acgtgggcaacgccatgttcgtggatgagcggctgaagctgctggacaagttcgtccaag 122964146

                                                                             
Query: 537       atgcccatgagctgtacttctccgaggccttctccatcagctttaaggactccgatgctg 596
                 |||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 122964147 atgcccgtgagctgtacttctccgaggtcttctccatcagctttaaggactccgatgctg 122964206

                                                                             
Query: 597       ccatagagttcatcaacaactatgtaaagaataagaccaaggggaaaattgtggatttgt 656
                 || |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 122964207 ccgtagagttcatcaacaactatgtgaagaataagaccaaggggaaaattgtggatttgt 122964266

                                                                          
Query: 657       tcaaacaactttccccagataccgtcctggttctggtgaactgcatctactttaaag 713
                 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 122964267 tcaaacaactttccccggataccgtcctggttctggtgaactgcatctactttaaag 122964323



 Score = 1128 bits (569), Expect = 0.0
 Identities = 635/657 (96%)
 Strand = Plus / Plus

                                                                             
Query: 57        cagacatgagggcggagggaatgtccctcttcctggctctgggcctcctggtggctgggc 116
                 ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 123036214 cagacatgagggcggagggaatgtccctcttcctggctctggggctcctggtggctgggc 123036273

                                                                             
Query: 117       tctgctccagggtccactgcctcccagcagatgaccttgcctcaaagactgtgaccctga 176
                 |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||
Sbjct: 123036274 tctgctccagggtccactgcgtcccagcggatgaccttgcctcaaagactgtgaccctga 123036333

                                                                             
Query: 177       agggccagatcaagaagctgccagcgcacaacaccgccgtcgtctccagcaacaccgact 236
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123036334 agggccagatcaagaagctgccagcgcacaacaccgccgtcgtctccagcaacaccgact 123036393

                                                                             
Query: 237       tcgccttcagcctctacaagcagctggtttctttagaccccagtaagaacgtcatcttct 296
                 ||||||||||||||||||||||||||| |      || | |||  | || ||||||||||
Sbjct: 123036394 tcgccttcagcctctacaagcagctggctctggccgaacgcagagaaaatgtcatcttct 123036453

                                                                             
Query: 297       ccccgctgagcgtctccatagccttggccttcctgtctctgggggcccgaggccccaccc 356
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123036454 ccccgctgagcgtctccatagccttggccttcctgtctctgggggcccgaggccccaccc 123036513

                                                                             
Query: 357       tgatagagctcctggaaggcctcaagttcaacctcacaaagacccccgaggcagaaatcc 416
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123036514 tgatagagctcctggaaggcctcaagttcaacctcacaaagacccccgaggcagaaatcc 123036573

                                                                             
Query: 417       accagggcttccagcacctcctgcgggccctcagccaacccagcaacctgctgcagctga 476
                 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 123036574 accagggcttccagcacctcctgcaggccctcagccaacccagcaacctgctgcagctga 123036633

                                                                             
Query: 477       acgtgggcaacgccatgttcgtggatgagcggctgaagctgctggacaagttcgtccaag 536
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123036634 acgtgggcaacgccatgttcgtggatgagcggctgaagctgctggacaagttcgtccaag 123036693

                                                                             
Query: 537       atgcccatgagctgtacttctccgaggccttctccatcagctttaaggactccgatgctg 596
                 |||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 123036694 atgcccgtgagctgtacttctccgaggtcttctccatcagctttaaggactccgatgctg 123036753

                                                                             
Query: 597       ccatagagttcatcaacaactatgtaaagaataagaccaaggggaaaattgtggatttgt 656
                 || |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 123036754 ccgtagagttcatcaacaactatgtgaagaataagaccaaggggaaaattgtggatttgt 123036813

                                                                          
Query: 657       tcaaacaactttccccagataccgtcctggttctggtgaactgcatctactttaaag 713
                 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 123036814 tcaaacaactttccccggataccgtcctggttctggtgaactgcatctactttaaag 123036870



 Score =  912 bits (460), Expect = 0.0
 Identities = 499/512 (97%)
 Strand = Plus / Minus

                                                                             
Query: 57        cagacatgagggcggagggaatgtccctcttcctggctctgggcctcctggtggctgggc 116
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123101427 cagacatgagggcggagggaatgtccctcttcctggctctgggcctcctggtggctgggc 123101368

                                                                             
Query: 117       tctgctccagggtccactgcctcccagcagatgaccttgcctcaaagactgtgaccctga 176
                 |||||||||||||||||||| ||||||| ||||||||||||||||||| |||||||||||
Sbjct: 123101367 tctgctccagggtccactgcgtcccagcggatgaccttgcctcaaagattgtgaccctga 123101308

                                                                             
Query: 177       agggccagatcaagaagctgccagcgcacaacaccgccgtcgtctccagcaacaccgact 236
                 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123101307 agggccagatcacgaagctgccagcgcacaacaccgccgtcgtctccagcaacaccgact 123101248

                                                                             
Query: 237       tcgccttcagcctctacaagcagctggtttctttagaccccagtaagaacgtcatcttct 296
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123101247 tcgccttcagcctctacaagcagctggtttctttagaccccagtaagaacgtcatcttct 123101188

                                                                             
Query: 297       ccccgctgagcgtctccatagccttggccttcctgtctctgggggcccgaggccccaccc 356
                 |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||
Sbjct: 123101187 ccccgctgagcgtctccatagccttggccttcctgtctctgggggcccaaggctccaccc 123101128

                                                                             
Query: 357       tgatagagctcctggaaggcctcaagttcaacctcacaaagacccccgaggcagaaatcc 416
                 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123101127 tgacagagctcctggaaggcctcaagttcaacctcacaaagacccccgaggcagaaatcc 123101068

                                                                             
Query: 417       accagggcttccagcacctcctgcgggccctcagccaacccagcaacctgctgcagctga 476
                 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 123101067 accagggcttccagcacctcctgcaggccctcagccaacccagcaacctgctgcagctga 123101008

                                                                             
Query: 477       acgtgggcaacgccatgttcgtggatgagcggctgaagctgctggacaagttcgtccaag 536
                 ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||
Sbjct: 123101007 acgtgggcaacgccatgttcgtggatgagcatctgaagctgctggacaagttcgtccaag 123100948

                                                 
Query: 537       atgcccatgagctgtacttctccgaggccttc 568
                 |||||| ||||||||||  |||||||||||||
Sbjct: 123100947 atgcccgtgagctgtaccactccgaggccttc 123100916



 Score =  654 bits (330), Expect = 0.0
 Identities = 541/606 (89%), Gaps = 4/606 (0%)
 Strand = Plus / Minus

                                                                             
Query: 57        cagacatgagggcggagggaatgtccctcttcctggctctgggcctcctggtggctgggc 116
                 |||||| |||||  |||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 123117426 cagacacgagggtagagggaatgtccctcttcctggctctgggcctcctggtggctggac 123117367

                                                                             
Query: 117       tctgctccagggtccactgcctcccagcagatgaccttgcctcaaagactgtgaccctga 176
                 |||||||||||||||||||| ||||||| ||||||| ||||||||||| |||||||||||
Sbjct: 123117366 tctgctccagggtccactgcgtcccagcggatgaccctgcctcaaagattgtgaccctga 123117307

                                                                             
Query: 177       agggccagatcaagaagctgccagcgcacaacaccgccgtcgtctccagcaacaccgact 236
                 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123117306 aggaccagatcaagaagctgccagcgcacaacaccgccgtcgtctccagcaacaccgact 123117247

                                                                             
Query: 237       tcgccttcagcctctacaagcagctggtttctttag-accccagtaagaacgtcatcttc 295
                 |||||||||||||||||||||||||||  |||   | ||||   | |||| |||||||||
Sbjct: 123117246 tcgccttcagcctctacaagcagctgg-ctctgacgaacccgcatgagaatgtcatcttc 123117188

                                                                             
Query: 296       tccccgctgagcgtctccatagccttggccttcctgtctctgggggcccgaggccccacc 355
                 |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 123117187 tccccgctgagcgtctccatggccttggccttcctgtctctgggggcccgaggccccacc 123117128

                                                                             
Query: 356       ctgatagagctcctggaaggcctcaagttcaacctcacaaagacccccgaggcagaaatc 415
                 |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123117127 ctgacagagctcctggaaggcctcaagttcaacctcacaaagacccccgaggcagaaatc 123117068

                                                                             
Query: 416       caccagggcttccagcacctcctgcgggccctcagccaacccagcaacctgctgcagctg 475
                 |||||||||||||||||||||||| |  | |||  |    | || |||||||||||||||
Sbjct: 123117067 caccagggcttccagcacctcctgagcacgctcgacaggtcgagtaacctgctgcagctg 123117008

                                                                             
Query: 476       aacgtgggcaacgccatgttcgtggatgagcggctgaagctgctggacaagttcgtccaa 535
                 |   ||||||| ||||||||| | ||||||| |||| |||||||||||||||||||||||
Sbjct: 123117007 aggttgggcaatgccatgttcattgatgagcagctggagctgctggacaagttcgtccaa 123116948

                                                                             
Query: 536       gatgcccatgagctgtacttctccgaggccttctccatcagctttaaggactccgatgct 595
                 ||||||||||||||||||  ||||||||||||| |||  | |||  |||| |  || |||
Sbjct: 123116947 gatgcccatgagctgtaccactccgaggccttccccactaacttccaggatttagaagct 123116888

                                                                             
Query: 596       gcca-tagagttcatcaacaactatgtaaagaataagaccaaggggaaaattgtggattt 654
                 ||||  |||  |||| ||  ||||||| |||||||||||| |||| ||||||||||| ||
Sbjct: 123116887 gccaggaga-ctcattaatgactatgtgaagaataagaccgagggaaaaattgtggactt 123116829

                       
Query: 655       gttcaa 660
                 ||||||
Sbjct: 123116828 gttcaa 123116823



 Score =  640 bits (323), Expect = 0.0
 Identities = 469/514 (91%), Gaps = 4/514 (0%)
 Strand = Plus / Plus

                                                                             
Query: 57        cagacatgagggcggagggaatgtccctcttcctggctctgggcctcctggtggctgggc 116
                 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122933474 cagacatgagggcagagggaatgtccctcttcctggctctgggcctcctggtggctgggc 122933533

                                                                             
Query: 117       tctgctccagggtccactgcctcccagcagatgaccttgcctcaaagactgtgaccctga 176
                 |||||||||||||||||||| ||||||| ||||||||||||||||||| |||||||||||
Sbjct: 122933534 tctgctccagggtccactgcgtcccagcggatgaccttgcctcaaagattgtgaccctga 122933593

                                                                             
Query: 177       agggccagatcaagaagctgccagcgcacaacaccgccgtcgtctccagcaacaccgact 236
                 ||| |||||||||||||||||||| ||||||||||||||| |||||||||||||||||||
Sbjct: 122933594 aggaccagatcaagaagctgccagtgcacaacaccgccgtggtctccagcaacaccgact 122933653

                                                                             
Query: 237       tcgccttcagcctctacaagcagctggtttctttagaccc--cagtaagaacgtcatctt 294
                 ||||||||||||||||||||||||| || |||   || ||  || ||||||  |||||||
Sbjct: 122933654 tcgccttcagcctctacaagcagct-gtctctgacgaaccgtca-taagaatatcatctt 122933711

                                                                             
Query: 295       ctccccgctgagcgtctccatagccttggccttcctgtctctgggggcccgaggccccac 354
                 ||||||||||||||||||||| |||||||||||||||||  |||| ||||||||||||||
Sbjct: 122933712 ctccccgctgagcgtctccatggccttggccttcctgtccttgggagcccgaggccccac 122933771

                                                                             
Query: 355       cctgatagagctcctggaaggcctcaagttcaacctcacaaagacccccgaggcagaaat 414
                 ||||| |||||||||||||||||||||||||||  ||||| ||||||| |||||||||||
Sbjct: 122933772 cctgacagagctcctggaaggcctcaagttcaatgtcacagagacccctgaggcagaaat 122933831

                                                                             
Query: 415       ccaccagggcttccagcacctcctgcgggccctcagccaacccagcaacctgctgcagct 474
                 ||||||||||||||||||||||||| || | |||| |   || |||||||||||||||||
Sbjct: 122933832 ccaccagggcttccagcacctcctgaggacgctcaacaggccgagcaacctgctgcagct 122933891

                                                                             
Query: 475       gaacgtgggcaacgccatgttcgtggatgagcggctgaagctgctggacaagttcgtcca 534
                 ||   ||||||||||||||||| | ||||||| |||| ||||||||||||||||||||||
Sbjct: 122933892 gaggttgggcaacgccatgttcattgatgagcagctggagctgctggacaagttcgtcca 122933951

                                                   
Query: 535       agatgcccatgagctgtacttctccgaggccttc 568
                 |||||||| ||||||||||  |||||||||||||
Sbjct: 122933952 agatgcccgtgagctgtaccactccgaggccttc 122933985



 Score =  571 bits (288), Expect = e-160
 Identities = 303/308 (98%)
 Strand = Plus / Minus

                                                                             
Query: 222       ccagcaacaccgacttcgccttcagcctctacaagcagctggtttctttagaccccagta 281
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123022910 ccagcaacaccgacttcgccttcagcctctacaagcagctggtttctttagaccccagta 123022851

                                                                             
Query: 282       agaacgtcatcttctccccgctgagcgtctccatagccttggccttcctgtctctggggg 341
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123022850 agaacgtcatcttctccccgctgagcgtctccatagccttggccttcctgtctctggggg 123022791

                                                                             
Query: 342       cccgaggccccaccctgatagagctcctggaaggcctcaagttcaacctcacaaagaccc 401
                 |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 123022790 cccgaggccccaccctgacagagctcctggaaggcctcaagttcaacctcacaaagaccc 123022731

                                                                             
Query: 402       ccgaggcagaaatccaccagggcttccagcacctcctgcgggccctcagccaacccagca 461
                 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 123022730 ccgaggcagaaatccaccagggcttccagcacctcctgcaggccctcagccaacccagca 123022671

                                                                             
Query: 462       acctgctgcagctgaacgtgggcaacgccatgttcgtggatgagcggctgaagctgctgg 521
                 |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||
Sbjct: 123022670 acctgctgcagctgaacgtgggcaacgccatgttcgtggatgagcatctgaagctgctgg 123022611

                         
Query: 522       acaagttc 529
                 || |||||
Sbjct: 123022610 acgagttc 123022603



 Score =  555 bits (280), Expect = e-155
 Identities = 301/308 (97%)
 Strand = Plus / Plus

                                                                             
Query: 222       ccagcaacaccgacttcgccttcagcctctacaagcagctggtttctttagaccccagta 281
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122999543 ccagcaacaccgacttcgccttcagcctctacaagcagctggtttctttagaccccagta 122999602

                                                                             
Query: 282       agaacgtcatcttctccccgctgagcgtctccatagccttggccttcctgtctctggggg 341
                 |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 122999603 agaacgtcatcttctccccgctgagcgtctccatggccttggccttcctgtctctggggg 122999662

                                                                             
Query: 342       cccgaggccccaccctgatagagctcctggaaggcctcaagttcaacctcacaaagaccc 401
                 |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 122999663 cccgaggccccaccctgacagagctcctggaaggcctcaagttcaacctcacaaagaccc 122999722

                                                                             
Query: 402       ccgaggcagaaatccaccagggcttccagcacctcctgcgggccctcagccaacccagca 461
                 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 122999723 ccgaggcagaaatccaccagggcttccagcacctcctgcaggccctcagccaacccagca 122999782

                                                                             
Query: 462       acctgctgcagctgaacgtgggcaacgccatgttcgtggatgagcggctgaagctgctgg 521
                 ||||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||
Sbjct: 122999783 acctgctgcagctgaacgtgggcaacgccatgttcgtggatgaacatctgaagctgctgg 122999842

                         
Query: 522       acaagttc 529
                 || |||||
Sbjct: 122999843 acgagttc 122999850



 Score =  301 bits (152), Expect = 4e-79
 Identities = 246/276 (89%), Gaps = 1/276 (0%)
 Strand = Plus / Minus

                                                                             
Query: 712       agccaagtggaagatgcccttccatcccagctttaccacggaggcagatttccacgtgag 771
                 |||||||||||||| ||||||| |||||| ||| ||||||||||||||||||||||||||
Sbjct: 123115289 agccaagtggaagacgcccttcaatcccaacttaaccacggaggcagatttccacgtgag 123115230

                                                                             
Query: 772       caagaacaggacggtgagggtgcccatgatgggcattacaggccgcatcgtgccttactg 831
                 ||||||||||||||||||||||||||||||||||||||  | ||  | ||||||||||| 
Sbjct: 123115229 caagaacaggacggtgagggtgcccatgatgggcattagggccctgaccgtgccttactt 123115170

                                                                             
Query: 832       catggaccaggagctggcctgctctgtggtggagctcccgtaca-cagacacgactgcac 890
                 |  |||| |||||||||||||| | ||||||||||||||||||| |||  ||||| || |
Sbjct: 123115169 ccgggacgaggagctggcctgcacggtggtggagctcccgtacaccagcaacgacagcgc 123115110

                                                                             
Query: 891       gctcttcatcctctctgacgacggcatgatggaggacgtaggagccaagctgctccctga 950
                 ||||||||||||| |||||||||||| ||||| || ||| | ||||||||||||||||||
Sbjct: 123115109 gctcttcatcctccctgacgacggcaggatggcggccgtggaagccaagctgctccctga 123115050

                                                     
Query: 951       tacactgatgaggtggagagactccctgcagcccag 986
                  ||||||| |||||||||||||| ||||||||||||
Sbjct: 123115049 gacactgaggaggtggagagacttcctgcagcccag 123115014



 Score =  289 bits (146), Expect = 1e-75
 Identities = 240/270 (88%), Gaps = 1/270 (0%)
 Strand = Plus / Plus

                                                                             
Query: 712       agccaagtggaagatgcccttccatcccagctttaccacggaggcagatttccacgtgag 771
                 |||||||||||||| ||||||  |||||||||||||||||||||||||||||||||||||
Sbjct: 122965989 agccaagtggaagacgccctttgatcccagctttaccacggaggcagatttccacgtgag 122966048

                                                                             
Query: 772       caagaacaggacggtgagggtgcccatgatgggcattacaggccgcatcgtgccttactg 831
                 ||||||||||||||||||||||||||||||||||||| | ||||| | | ||||||||| 
Sbjct: 122966049 caagaacaggacggtgagggtgcccatgatgggcatttcgggccggaccctgccttactt 122966108

                                                                             
Query: 832       catggaccaggagctggcctgctctgtggtggagctcccgtaca-cagacacgactgcac 890
                 |  |||| |||||||||||||| | ||||||||||||||||||| |||  ||||| || |
Sbjct: 122966109 ccgggacgaggagctggcctgcacggtggtggagctcccgtacaccagcaacgacagcgc 122966168

                                                                             
Query: 891       gctcttcatcctctctgacgacggcatgatggaggacgtaggagccaagctgctccctga 950
                 ||||||||||||| |||||||||||| ||||| || ||| | |||| |||||||||| ||
Sbjct: 122966169 gctcttcatcctccctgacgacggcaggatggcggccgtggaagcccagctgctcccgga 122966228

                                               
Query: 951       tacactgatgaggtggagagactccctgca 980
                  || |||| |||||||||||||||||||||
Sbjct: 122966229 gacgctgaggaggtggagagactccctgca 122966258



 Score =  200 bits (101), Expect = 1e-48
 Identities = 216/253 (85%), Gaps = 1/253 (0%)
 Strand = Plus / Minus

                                                                             
Query: 735       atcccagctttaccacggaggcagatttccacgtgagcaagaacaggacggtgagggtgc 794
                 |||||| | |||| ||||||||||||||| ||||||||||||||| ||| |||| |||||
Sbjct: 123099144 atcccaaccttactacggaggcagatttctacgtgagcaagaacaagacagtgaaggtgc 123099085

                                                                             
Query: 795       ccatgatgggcattacaggccgcatcgtgccttactgcatggaccaggagctggcctgct 854
                 |||||||||||||||    ||  | |||||| |||| |  |||| |||||||||||||| 
Sbjct: 123099084 ccatgatgggcattaagaacctgaccgtgccatacttccgggacgaggagctggcctgca 123099025

                                                                             
Query: 855       ctgtggtggagctcccgtacac-agacacgactgcacgctcttcatcctctctgacgacg 913
                 | |||||||||||||||||||| ||  ||||| ||||||||||||||||| |||||||||
Sbjct: 123099024 cggtggtggagctcccgtacaccagcaacgacagcacgctcttcatcctccctgacgacg 123098965

                                                                             
Query: 914       gcatgatggaggacgtaggagccaagctgctccctgatacactgatgaggtggagagact 973
                 ||| ||||| || ||| | |||||| |||||||| || |  |||| ||||||||||||||
Sbjct: 123098964 gcaggatggcggccgtggaagccaatctgctcccggagatgctgaggaggtggagagact 123098905

                              
Query: 974       ccctgcagcccag 986
                 |||||||||||||
Sbjct: 123098904 ccctgcagcccag 123098892



 Score =  188 bits (95), Expect = 4e-45
 Identities = 182/203 (89%), Gaps = 6/203 (2%)
 Strand = Plus / Plus

                                                                             
Query: 712       agccaagtggaagatgcccttccatcccagctttaccacggaggcagatttccacgtgag 771
                 |||||||||||||||||||||| |||||| |||||| |||| ||||||||||||||||||
Sbjct: 123038539 agccaagtggaagatgcccttc-atcccaactttac-acgggggcagatttccacgtgag 123038596

                                                                             
Query: 772       caagaacaggacggtgagggtgcccatgatgggcattacaggccgcatcgtgccttactg 831
                 ||||||||| ||||||||| ||||||||||||||||||| ||||||| ||||||||||| 
Sbjct: 123038597 caagaacag-acggtgagg-tgcccatgatgggcattacgggccgcaccgtgccttactt 123038654

                                                                             
Query: 832       catggaccaggagctggcctgctctgtggtggagctcccgtaca-cagacacgactgcac 890
                 |  ||| ||||||||||||||| | ||||||||||||||||||| |||  ||||| || |
Sbjct: 123038655 ccgggaacaggagctggcctgcacggtggtggagctcccgtacaccagcaacgacagcgc 123038714

                                        
Query: 891       gctcttcatcctctctgacgacg 913
                 |||| |||||||| |||||||||
Sbjct: 123038715 gctc-tcatcctccctgacgacg 123038736



 Score =  157 bits (79), Expect = 1e-35
 Identities = 191/227 (84%), Gaps = 1/227 (0%)
 Strand = Plus / Minus

                                                                             
Query: 761       ttccacgtgagcaagaacaggacggtgagggtgcccatgatgggcattacaggccgcatc 820
                 ||||||||||||||||||||||| |||| ||||||||||||| || ||  |||||     
Sbjct: 123020815 ttccacgtgagcaagaacaggacagtgaaggtgcccatgatgagccttcgaggcctggaa 123020756

                                                                             
Query: 821       gtgccttactgcatggaccaggagctggcctgctctgtggtggagctcccgtacac-aga 879
                    ||||||| |  |||| |||||||||||||| | |||||||||||||||||||| || 
Sbjct: 123020755 acaccttacttccgggacgaggagctggcctgcacggtggtggagctcccgtacaccagc 123020696

                                                                             
Query: 880       cacgactgcacgctcttcatcctctctgacgacggcatgatggaggacgtaggagccaag 939
                  ||||| || |||||||||||||| ||||||| |||| ||||| || ||| | |||||||
Sbjct: 123020695 aacgacagcgcgctcttcatcctccctgacgatggcaggatggcggccgtggaagccaag 123020636

                                                                
Query: 940       ctgctccctgatacactgatgaggtggagagactccctgcagcccag 986
                 |||||||| || || |||| |||||||||||||||||||||||||||
Sbjct: 123020635 ctgctcccggagacgctgaggaggtggagagactccctgcagcccag 123020589



 Score =  113 bits (57), Expect = 2e-22
 Identities = 75/81 (92%)
 Strand = Plus / Plus

                                                                             
Query: 61        catgagggcggagggaatgtccctcttcctggctctgggcctcctggtggctgggctctg 120
                 ||||| ||| ||||| ||||||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 122999382 catgaaggcagagggcatgtcccccttcctggctctggggctcctggtggctgggctctg 122999441

                                      
Query: 121       ctccagggtccactgcctccc 141
                 |||||||||||||||| ||||
Sbjct: 122999442 ctccagggtccactgcgtccc 122999462



 Score =  113 bits (57), Expect = 2e-22
 Identities = 75/81 (92%)
 Strand = Plus / Minus

                                                                             
Query: 61        catgagggcggagggaatgtccctcttcctggctctgggcctcctggtggctgggctctg 120
                 ||||| ||| ||||| ||||||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 123023071 catgaaggcagagggcatgtcccccttcctggctctggggctcctggtggctgggctctg 123023012

                                      
Query: 121       ctccagggtccactgcctccc 141
                 |||||||||||||||| ||||
Sbjct: 123023011 ctccagggtccactgcgtccc 123022991



 Score =  109 bits (55), Expect = 3e-21
 Identities = 58/59 (98%)
 Strand = Plus / Minus

                                                                            
Query: 1         agcattgcgggcaggcagcggctctgggtccactcagcgcatcccgctctgcgaggcag 59
                 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122953936 agcattgcgggcaggcggcggctctgggtccactcagcgcatcccgctctgcgaggcag 122953878



 Score =  109 bits (55), Expect = 3e-21
 Identities = 58/59 (98%)
 Strand = Plus / Minus

                                                                            
Query: 1         agcattgcgggcaggcagcggctctgggtccactcagcgcatcccgctctgcgaggcag 59
                 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123103334 agcattgcgggcaggcggcggctctgggtccactcagcgcatcccgctctgcgaggcag 123103276



 Score =  101 bits (51), Expect = 7e-19
 Identities = 57/59 (96%)
 Strand = Plus / Minus

                                                                            
Query: 1         agcattgcgggcaggcagcggctctgggtccactcagcgcatcccgctctgcgaggcag 59
                 |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 123024977 agcattgcgggcaggcggcggctctgggtccactcagcacatcccgctctgcgaggcag 123024919



 Score =  101 bits (51), Expect = 7e-19
 Identities = 57/59 (96%)
 Strand = Plus / Minus

                                                                            
Query: 1         agcattgcgggcaggcagcggctctgggtccactcagcgcatcccgctctgcgaggcag 59
                 |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 123119625 agcattgcgggcaggcggcggctctgggtccactcagcgcatcctgctctgcgaggcag 123119567



 Score = 93.7 bits (47), Expect = 2e-16
 Identities = 56/59 (94%)
 Strand = Plus / Plus

                                                                            
Query: 1         agcattgcgggcaggcagcggctctgggtccactcagcgcatcccgctctgcgaggcag 59
                 |||||||||||||||  | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 122961778 agcattgcgggcaggtggtggctctgggtccactcagcgcatcccgctctgcgaggcag 122961836


  Database: Sscrofa_10.2.fasta
    Posted date:  Nov 16, 2011 10:34 AM
  Number of letters in database: 2,808,509,378
  Number of sequences in database:  4582
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 26,969,992
Number of extensions: 265
Number of successful extensions: 265
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 257
Number of HSP's successfully gapped: 26
Length of query: 999
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 978
Effective length of database: 2,808,413,156
Effective search space: 2746628066568
Effective search space used: 2746628066568
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 29 (58.0 bits)