Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-000822
(999 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001075181.1| SERPINA3-8 [Bos taurus]. 320 5e-96
Alignment gi|NP_001139774.1| serpin A3-6 [Bos taurus]. 312 3e-94
Alignment gi|NP_001075213.1| serpin A3-5 [Bos taurus]. 308 4e-94
Alignment gi|XP_001787316.2| PREDICTED: endopin 2C-like [Bos taurus]. 305 8e-93
Alignment gi|XP_002696874.1| PREDICTED: endopin 2C-like [Bos taurus]. 305 1e-92
Alignment gi|NP_001139773.1| serpin A3-2 [Bos taurus]. 303 3e-92
Alignment gi|NP_777193.2| serpin A3-1 precursor [Bos taurus]. 302 5e-92
Alignment gi|XP_001252647.3| PREDICTED: endopin 2B-like [Bos taurus]. 298 2e-90
Alignment gi|NP_001033293.1| serpin A3-3 [Bos taurus]. 299 3e-90
Alignment gi|XP_001252670.1| PREDICTED: endopin 1b-like isoform 1 [Bos ta... 300 2e-89
>ref|NP_001075181.1| SERPINA3-8 [Bos taurus].
Length = 418
Score = 320 bits (821), Expect(2) = 5e-96
Identities = 168/271 (61%), Positives = 199/271 (73%)
Frame = +2
Query: 62 MRAEGMSXXXXXXXXXXXXCSRVHCLPADDLASKTVTLKGQIKKLPAHNTAVVSSNTDFA 241
MRAE MS CSRVHCLP + V + + K ++ SSNTDFA
Sbjct: 1 MRAERMSPLLALGLLVSGLCSRVHCLP------ENVAPEERHKGTSVDGHSLASSNTDFA 54
Query: 242 FSLYKQLVSLDPSKNVIFSPLSVSIALAFLSLGARGPTLIELLEGLKFNLTKTPEAEIHQ 421
FSLYKQL +P+KNVIFSPLS+SIALAFLSLGARGPT+ E+LEGLKFNLT+TPE EIHQ
Sbjct: 55 FSLYKQLALKNPNKNVIFSPLSISIALAFLSLGARGPTVTEILEGLKFNLTETPEREIHQ 114
Query: 422 GFQHLLRALSQPSNLLQLNVGNAMFVDERLKLLDKFVQDAHELYFSEAFSISFKDSDAAI 601
GFQHLL+ LS+PSN LQL+VGN MFV E+LKLLDKF +DA LY SEAFS +FKD + A
Sbjct: 115 GFQHLLQMLSRPSNELQLSVGNTMFVQEQLKLLDKFREDALALYTSEAFSTNFKDPETAK 174
Query: 602 EFINNYVKNKTKGKIVDLFKQLSPDTVLVLVNCIYFKAKWKMPFHPSFTTEADFHVSKNR 781
IN+YVKNKT+GKIVDLFK L P T ++LVN IYFKA+W+ PF P T ++ FHVSKN+
Sbjct: 175 SLINDYVKNKTRGKIVDLFKDLDPLTKVILVNYIYFKAQWRTPFDPKQTYKSQFHVSKNK 234
Query: 782 TVRVPMMGITGRIVPYCMDQELACSVVELPY 874
TV VPMM I + PY D+EL C++VEL Y
Sbjct: 235 TVEVPMMSIGDLVTPYFRDEELDCTLVELTY 265
Score = 50.1 bits (118), Expect(2) = 5e-96
Identities = 22/38 (57%), Positives = 29/38 (76%)
Frame = +1
Query: 880 HDCTLFILSDDGMMEDVGAKLLPDTLMRWRDSLQPRRI 993
+D LFIL D+G M+D+ AKL+P+ L RWR+SL PR I
Sbjct: 268 NDSALFILPDEGKMQDLEAKLIPEMLTRWRESLYPRGI 305
>ref|NP_001139774.1| serpin A3-6 [Bos taurus].
Length = 414
Score = 312 bits (799), Expect(2) = 3e-94
Identities = 165/271 (60%), Positives = 195/271 (71%)
Frame = +2
Query: 62 MRAEGMSXXXXXXXXXXXXCSRVHCLPADDLASKTVTLKGQIKKLPAHNTAVVSSNTDFA 241
MR E +S CSRVHCLP + VT + Q K ++ SSNTDFA
Sbjct: 1 MRTERVSPLLALGILVAGLCSRVHCLP------ENVTPEEQHKVTSVDGHSLASSNTDFA 54
Query: 242 FSLYKQLVSLDPSKNVIFSPLSVSIALAFLSLGARGPTLIELLEGLKFNLTKTPEAEIHQ 421
FSLYKQL DP+KNVIFSPLSVSIALAFLSLGA GPT+ E+LEGLKFNLT+TPE EIHQ
Sbjct: 55 FSLYKQLALKDPNKNVIFSPLSVSIALAFLSLGAHGPTVTEILEGLKFNLTETPETEIHQ 114
Query: 422 GFQHLLRALSQPSNLLQLNVGNAMFVDERLKLLDKFVQDAHELYFSEAFSISFKDSDAAI 601
GFQHLL+ +QPSN LQL+VGNA+FV E LKLLDKF++DA LY SEAF +F+D +AA
Sbjct: 115 GFQHLLQTFNQPSNQLQLSVGNAIFVQEELKLLDKFIEDARVLYSSEAFPTNFRDPEAAK 174
Query: 602 EFINNYVKNKTKGKIVDLFKQLSPDTVLVLVNCIYFKAKWKMPFHPSFTTEADFHVSKNR 781
IN+YVKNKT+GKI +LFK LSP T LVLVN +YFKA+WK F P T + +FHVS N+
Sbjct: 175 SLINDYVKNKTQGKIEELFKDLSPRTELVLVNYVYFKAQWKTRFDPKHTEKTEFHVSDNK 234
Query: 782 TVRVPMMGITGRIVPYCMDQELACSVVELPY 874
TV VPMM + PY D+EL C++VEL Y
Sbjct: 235 TVEVPMMTLDLE-TPYFRDEELGCTLVELTY 264
Score = 52.4 bits (124), Expect(2) = 3e-94
Identities = 24/38 (63%), Positives = 29/38 (76%)
Frame = +1
Query: 880 HDCTLFILSDDGMMEDVGAKLLPDTLMRWRDSLQPRRI 993
+D LFIL D G M+D+ AKL P+ L RWR+SLQPRRI
Sbjct: 267 NDSALFILPDKGKMQDLEAKLTPEMLTRWRNSLQPRRI 304
>ref|NP_001075213.1| serpin A3-5 [Bos taurus].
Length = 411
Score = 308 bits (789), Expect(2) = 4e-94
Identities = 162/249 (65%), Positives = 194/249 (77%)
Frame = +2
Query: 128 VHCLPADDLASKTVTLKGQIKKLPAHNTAVVSSNTDFAFSLYKQLVSLDPSKNVIFSPLS 307
VHCLP + V +K Q +++ +H A SSNTDFAFSLYKQL +P+KNV+FSPLS
Sbjct: 22 VHCLP------ENVVVKDQRRRVDSHTLA--SSNTDFAFSLYKQLALKNPNKNVMFSPLS 73
Query: 308 VSIALAFLSLGARGPTLIELLEGLKFNLTKTPEAEIHQGFQHLLRALSQPSNLLQLNVGN 487
VS+ALAFLSLGARGPTL E+LEGLKFNLT+ E +IHQGFQHLL+AL++PSN LQL+VGN
Sbjct: 74 VSMALAFLSLGARGPTLTEILEGLKFNLTEIQETQIHQGFQHLLQALNRPSNQLQLSVGN 133
Query: 488 AMFVDERLKLLDKFVQDAHELYFSEAFSISFKDSDAAIEFINNYVKNKTKGKIVDLFKQL 667
AMFV E LKLLDKF++DA LY SEAF +F+DS+AA IN+YVKNKT+GKI +LFK L
Sbjct: 134 AMFVQEELKLLDKFIEDARVLYSSEAFPTNFRDSEAARSLINDYVKNKTQGKIEELFKYL 193
Query: 668 SPDTVLVLVNCIYFKAKWKMPFHPSFTTEADFHVSKNRTVRVPMMGITGRIVPYCMDQEL 847
SP TVLVLVN IYFKA+WK F P T +A+FHVSKN+TV VPMM + PY D+EL
Sbjct: 194 SPRTVLVLVNYIYFKAQWKTRFDPKHTEQAEFHVSKNKTVEVPMMTLDLE-TPYFRDKEL 252
Query: 848 ACSVVELPY 874
C +VEL Y
Sbjct: 253 GCMLVELTY 261
Score = 55.8 bits (133), Expect(2) = 4e-94
Identities = 25/38 (65%), Positives = 31/38 (81%)
Frame = +1
Query: 880 HDCTLFILSDDGMMEDVGAKLLPDTLMRWRDSLQPRRI 993
+D LFIL D+G M+D+ AKL P+TL RWR+SLQPRRI
Sbjct: 264 NDSALFILPDEGKMQDLEAKLTPETLTRWRNSLQPRRI 301
>ref|XP_001787316.2| PREDICTED: endopin 2C-like [Bos taurus].
Length = 411
Score = 305 bits (782), Expect(2) = 8e-93
Identities = 162/271 (59%), Positives = 193/271 (71%)
Frame = +2
Query: 62 MRAEGMSXXXXXXXXXXXXCSRVHCLPADDLASKTVTLKGQIKKLPAHNTAVVSSNTDFA 241
MR E MS CSRVHCLP + VT + Q K ++ SSNTDFA
Sbjct: 1 MRTERMSPLLALGLLVSGLCSRVHCLP------ENVTPEEQHKVTSVDGHSLASSNTDFA 54
Query: 242 FSLYKQLVSLDPSKNVIFSPLSVSIALAFLSLGARGPTLIELLEGLKFNLTKTPEAEIHQ 421
FSLYKQL DP+KNVIFSPLS+SIALAFLSLGA GPT+ E+LEGLKFNLT+TPE EIHQ
Sbjct: 55 FSLYKQLALKDPNKNVIFSPLSISIALAFLSLGAHGPTVTEILEGLKFNLTETPETEIHQ 114
Query: 422 GFQHLLRALSQPSNLLQLNVGNAMFVDERLKLLDKFVQDAHELYFSEAFSISFKDSDAAI 601
GFQHLL+ +QPSN LQL+VGNA+FV E LKLLDKF +DA Y SE SI+FKDS+AA+
Sbjct: 115 GFQHLLQTFNQPSNQLQLSVGNAIFVPEELKLLDKFRKDAEAFYASEVLSINFKDSEAAV 174
Query: 602 EFINNYVKNKTKGKIVDLFKQLSPDTVLVLVNCIYFKAKWKMPFHPSFTTEADFHVSKNR 781
+ IN YVKNKT GKI L L T L+L+N I+FKA+WK PF+P+ T E++FHVSKN
Sbjct: 175 KLINEYVKNKTHGKIEKLLNDLDVLTNLILLNYIFFKAQWKTPFNPNHTYESEFHVSKNE 234
Query: 782 TVRVPMMGITGRIVPYCMDQELACSVVELPY 874
V+VPMM + PY D+EL C++VEL Y
Sbjct: 235 RVKVPMMTLRLE-TPYFRDEELGCTLVELTY 264
Score = 54.3 bits (129), Expect(2) = 8e-93
Identities = 24/38 (63%), Positives = 31/38 (81%)
Frame = +1
Query: 880 HDCTLFILSDDGMMEDVGAKLLPDTLMRWRDSLQPRRI 993
+D LFIL D+G M+D+ AKL P+TL RWR+SLQPR+I
Sbjct: 267 NDSALFILPDEGKMQDLEAKLTPETLTRWRNSLQPRQI 304
>ref|XP_002696874.1| PREDICTED: endopin 2C-like [Bos taurus].
Length = 417
Score = 305 bits (782), Expect(2) = 1e-92
Identities = 162/271 (59%), Positives = 193/271 (71%)
Frame = +2
Query: 62 MRAEGMSXXXXXXXXXXXXCSRVHCLPADDLASKTVTLKGQIKKLPAHNTAVVSSNTDFA 241
MR E MS CSRVHCLP + VT + Q K ++ SSNTDFA
Sbjct: 1 MRTERMSPLLALGLLVSGLCSRVHCLP------ENVTPEEQHKVTSVDGHSLASSNTDFA 54
Query: 242 FSLYKQLVSLDPSKNVIFSPLSVSIALAFLSLGARGPTLIELLEGLKFNLTKTPEAEIHQ 421
FSLYKQL DP+KNVIFSPLS+SIALAFLSLGA GPT+ E+LEGLKFNLT+TPE EIHQ
Sbjct: 55 FSLYKQLALKDPNKNVIFSPLSISIALAFLSLGAHGPTVTEILEGLKFNLTETPETEIHQ 114
Query: 422 GFQHLLRALSQPSNLLQLNVGNAMFVDERLKLLDKFVQDAHELYFSEAFSISFKDSDAAI 601
GFQHLL+ +QPSN LQL+VGNA+FV E LKLLDKF +DA Y SE SI+FKDS+AA+
Sbjct: 115 GFQHLLQTFNQPSNQLQLSVGNAIFVPEELKLLDKFRKDAEAFYASEVLSINFKDSEAAV 174
Query: 602 EFINNYVKNKTKGKIVDLFKQLSPDTVLVLVNCIYFKAKWKMPFHPSFTTEADFHVSKNR 781
+ IN YVKNKT GKI L L T L+L+N I+FKA+WK PF+P+ T E++FHVSKN
Sbjct: 175 KLINEYVKNKTHGKIEKLLNDLDVLTNLILLNYIFFKAQWKTPFNPNHTYESEFHVSKNE 234
Query: 782 TVRVPMMGITGRIVPYCMDQELACSVVELPY 874
V+VPMM + PY D+EL C++VEL Y
Sbjct: 235 RVKVPMMTLRLE-TPYFRDEELGCTLVELTY 264
Score = 53.9 bits (128), Expect(2) = 1e-92
Identities = 24/38 (63%), Positives = 30/38 (78%)
Frame = +1
Query: 880 HDCTLFILSDDGMMEDVGAKLLPDTLMRWRDSLQPRRI 993
+D LFIL D+G M+D+ AKL P+TL RWR+SLQPR I
Sbjct: 267 NDSALFILPDEGKMQDLEAKLTPETLTRWRNSLQPRHI 304
>ref|NP_001139773.1| serpin A3-2 [Bos taurus].
Length = 411
Score = 303 bits (775), Expect(2) = 3e-92
Identities = 161/249 (64%), Positives = 189/249 (75%)
Frame = +2
Query: 128 VHCLPADDLASKTVTLKGQIKKLPAHNTAVVSSNTDFAFSLYKQLVSLDPSKNVIFSPLS 307
VHCLP + V +K Q +++ H A SSNTDFAFSLYKQL +P+KNVI SPLS
Sbjct: 22 VHCLP------ENVVVKDQHRRVDGHTLA--SSNTDFAFSLYKQLALKNPNKNVILSPLS 73
Query: 308 VSIALAFLSLGARGPTLIELLEGLKFNLTKTPEAEIHQGFQHLLRALSQPSNLLQLNVGN 487
VSIALAFLSLGARG TL E+LEGLKFNLT+ E EIH FQHLL+AL+QPSN LQL+VGN
Sbjct: 74 VSIALAFLSLGARGSTLTEILEGLKFNLTEIQEKEIHHSFQHLLQALNQPSNQLQLSVGN 133
Query: 488 AMFVDERLKLLDKFVQDAHELYFSEAFSISFKDSDAAIEFINNYVKNKTKGKIVDLFKQL 667
AMFV E LKLLDKF++DA LY SEAF +F+DS+AA IN+YVKNKT+GKI +LFK L
Sbjct: 134 AMFVQEELKLLDKFIEDAQVLYSSEAFPTNFRDSEAARSLINDYVKNKTQGKIEELFKYL 193
Query: 668 SPDTVLVLVNCIYFKAKWKMPFHPSFTTEADFHVSKNRTVRVPMMGITGRIVPYCMDQEL 847
SP T LVLVN IYFKA+WK PF P T +A+FHVS N+TV VPMM + PY D+EL
Sbjct: 194 SPRTELVLVNYIYFKAQWKTPFDPKHTEQAEFHVSDNKTVEVPMMTLDLE-TPYFRDEEL 252
Query: 848 ACSVVELPY 874
C++VEL Y
Sbjct: 253 GCTLVELTY 261
Score = 55.1 bits (131), Expect(2) = 3e-92
Identities = 25/38 (65%), Positives = 30/38 (78%)
Frame = +1
Query: 880 HDCTLFILSDDGMMEDVGAKLLPDTLMRWRDSLQPRRI 993
+D LFIL D+G M D+ AKL P+TL RWR+SLQPRRI
Sbjct: 264 NDSALFILPDEGKMRDLEAKLTPETLTRWRNSLQPRRI 301
>ref|NP_777193.2| serpin A3-1 precursor [Bos taurus].
Length = 411
Score = 302 bits (773), Expect(2) = 5e-92
Identities = 161/249 (64%), Positives = 189/249 (75%)
Frame = +2
Query: 128 VHCLPADDLASKTVTLKGQIKKLPAHNTAVVSSNTDFAFSLYKQLVSLDPSKNVIFSPLS 307
VHCLP + V +K Q +++ H A SSNTDFAFSLYKQL +P+KNVI SPLS
Sbjct: 22 VHCLP------ENVVVKDQHRRVDGHTLA--SSNTDFAFSLYKQLPLKNPNKNVILSPLS 73
Query: 308 VSIALAFLSLGARGPTLIELLEGLKFNLTKTPEAEIHQGFQHLLRALSQPSNLLQLNVGN 487
VSIALAFLSLGARG TL E+LEGLKFNLT+ E EIH FQHLL+AL+QPSN LQL+VGN
Sbjct: 74 VSIALAFLSLGARGSTLTEILEGLKFNLTEIQEKEIHHSFQHLLQALNQPSNQLQLSVGN 133
Query: 488 AMFVDERLKLLDKFVQDAHELYFSEAFSISFKDSDAAIEFINNYVKNKTKGKIVDLFKQL 667
AMFV E LKLLDKF++DA LY SEAF +F+DS+AA IN+YVKNKT+GKI +LFK L
Sbjct: 134 AMFVQEELKLLDKFIEDAQVLYSSEAFPTNFRDSEAARSLINDYVKNKTQGKIEELFKYL 193
Query: 668 SPDTVLVLVNCIYFKAKWKMPFHPSFTTEADFHVSKNRTVRVPMMGITGRIVPYCMDQEL 847
SP T LVLVN IYFKA+WK PF P T +A+FHVS N+TV VPMM + PY D+EL
Sbjct: 194 SPRTELVLVNYIYFKAQWKTPFDPKHTEQAEFHVSDNKTVEVPMMTLDLE-TPYFRDEEL 252
Query: 848 ACSVVELPY 874
C++VEL Y
Sbjct: 253 GCTLVELTY 261
Score = 55.1 bits (131), Expect(2) = 5e-92
Identities = 25/38 (65%), Positives = 30/38 (78%)
Frame = +1
Query: 880 HDCTLFILSDDGMMEDVGAKLLPDTLMRWRDSLQPRRI 993
+D LFIL D+G M D+ AKL P+TL RWR+SLQPRRI
Sbjct: 264 NDSALFILPDEGKMRDLEAKLTPETLTRWRNSLQPRRI 301
>ref|XP_001252647.3| PREDICTED: endopin 2B-like [Bos taurus].
Length = 417
Score = 298 bits (762), Expect(2) = 2e-90
Identities = 160/271 (59%), Positives = 190/271 (70%)
Frame = +2
Query: 62 MRAEGMSXXXXXXXXXXXXCSRVHCLPADDLASKTVTLKGQIKKLPAHNTAVVSSNTDFA 241
MR E MS CSRVHCLP + VT + Q K ++ SSNTDFA
Sbjct: 1 MRTERMSPLLALGLLVSGFCSRVHCLP------ENVTPEEQHKGTSVDGHSLASSNTDFA 54
Query: 242 FSLYKQLVSLDPSKNVIFSPLSVSIALAFLSLGARGPTLIELLEGLKFNLTKTPEAEIHQ 421
FSLYKQL DP+KNVIFSPLS+SIALAFLSLGA T+ E+LEGLKFNLT+TPE EIHQ
Sbjct: 55 FSLYKQLALKDPNKNVIFSPLSISIALAFLSLGAHDHTVTEILEGLKFNLTETPETEIHQ 114
Query: 422 GFQHLLRALSQPSNLLQLNVGNAMFVDERLKLLDKFVQDAHELYFSEAFSISFKDSDAAI 601
GFQHLL+ +QPSN LQL+VGNAMFV E LKLLDKF +DA Y SE S +FKDS+AA+
Sbjct: 115 GFQHLLQTFNQPSNQLQLSVGNAMFVSEELKLLDKFRKDAEAFYASEVLSTNFKDSEAAV 174
Query: 602 EFINNYVKNKTKGKIVDLFKQLSPDTVLVLVNCIYFKAKWKMPFHPSFTTEADFHVSKNR 781
+ IN YVKNKT GKI LF L T L+L+N I+FKA+WK PF+P+ T E++FHVS+N
Sbjct: 175 KLINEYVKNKTHGKIEKLFNDLDVLTNLILLNYIFFKAQWKTPFNPNHTYESEFHVSQNE 234
Query: 782 TVRVPMMGITGRIVPYCMDQELACSVVELPY 874
V VPMM + PY D+EL C++VEL Y
Sbjct: 235 RVIVPMMTLYLE-TPYFRDEELGCTLVELTY 264
Score = 53.9 bits (128), Expect(2) = 2e-90
Identities = 24/38 (63%), Positives = 30/38 (78%)
Frame = +1
Query: 880 HDCTLFILSDDGMMEDVGAKLLPDTLMRWRDSLQPRRI 993
+D LFIL D+G M+D+ AKL P+TL RWR+SLQPR I
Sbjct: 267 NDSALFILPDEGKMQDLEAKLTPETLTRWRNSLQPRHI 304
>ref|NP_001033293.1| serpin A3-3 [Bos taurus].
Length = 411
Score = 299 bits (765), Expect(2) = 3e-90
Identities = 156/249 (62%), Positives = 190/249 (76%)
Frame = +2
Query: 128 VHCLPADDLASKTVTLKGQIKKLPAHNTAVVSSNTDFAFSLYKQLVSLDPSKNVIFSPLS 307
VHCLP + V +K + +++ H A SSNTDFAFSLYKQL +P+KNV+FSPLS
Sbjct: 22 VHCLP------ENVVVKDRHRRVDGHTLA--SSNTDFAFSLYKQLALKNPNKNVMFSPLS 73
Query: 308 VSIALAFLSLGARGPTLIELLEGLKFNLTKTPEAEIHQGFQHLLRALSQPSNLLQLNVGN 487
VS+ALAFLSLGARGPTL E+LEGLKFNLT+ E +IHQGFQHLL+AL++P N LQL+VGN
Sbjct: 74 VSMALAFLSLGARGPTLTEILEGLKFNLTEIQETQIHQGFQHLLQALNRPRNQLQLSVGN 133
Query: 488 AMFVDERLKLLDKFVQDAHELYFSEAFSISFKDSDAAIEFINNYVKNKTKGKIVDLFKQL 667
AMFV E LKLLDKF++DA LY SEAF +F+D +AA IN+YVKNKT+GKI +LFK L
Sbjct: 134 AMFVQEELKLLDKFIEDARVLYSSEAFPTNFRDPEAAKSLINDYVKNKTQGKIEELFKDL 193
Query: 668 SPDTVLVLVNCIYFKAKWKMPFHPSFTTEADFHVSKNRTVRVPMMGITGRIVPYCMDQEL 847
SP T LVLVN +YFKA+WK F P T +A+FHVS N+TV VPMM + PY D+EL
Sbjct: 194 SPRTELVLVNYVYFKAQWKTRFDPKHTEQAEFHVSDNKTVEVPMMTLDLE-TPYFRDEEL 252
Query: 848 ACSVVELPY 874
C++VEL Y
Sbjct: 253 GCTLVELTY 261
Score = 52.4 bits (124), Expect(2) = 3e-90
Identities = 24/38 (63%), Positives = 29/38 (76%)
Frame = +1
Query: 880 HDCTLFILSDDGMMEDVGAKLLPDTLMRWRDSLQPRRI 993
+D LFIL D G M+D+ AKL P+ L RWR+SLQPRRI
Sbjct: 264 NDSALFILPDKGKMQDLEAKLTPEMLTRWRNSLQPRRI 301
>ref|XP_001252670.1| PREDICTED: endopin 1b-like isoform 1 [Bos taurus].
Length = 299
Score = 300 bits (767), Expect(2) = 2e-89
Identities = 158/249 (63%), Positives = 190/249 (76%)
Frame = +2
Query: 128 VHCLPADDLASKTVTLKGQIKKLPAHNTAVVSSNTDFAFSLYKQLVSLDPSKNVIFSPLS 307
VHCLP + V +K + +++ H A SSNTDFAFSLYKQL +P+KNV+FSPLS
Sbjct: 22 VHCLP------ENVVVKDRHRRVDGHTLA--SSNTDFAFSLYKQLALKNPNKNVMFSPLS 73
Query: 308 VSIALAFLSLGARGPTLIELLEGLKFNLTKTPEAEIHQGFQHLLRALSQPSNLLQLNVGN 487
VS+ALAFLSLGARGPTL E+LEGLKFNLT+ E +IHQGFQHLL+AL++PSN LQL+VGN
Sbjct: 74 VSMALAFLSLGARGPTLTEILEGLKFNLTEIQETQIHQGFQHLLQALNRPSNQLQLSVGN 133
Query: 488 AMFVDERLKLLDKFVQDAHELYFSEAFSISFKDSDAAIEFINNYVKNKTKGKIVDLFKQL 667
AMFV E LKLLDKF++DA LY SEAF +F D +AA IN+YVK KT+GKI +LFK L
Sbjct: 134 AMFVQEELKLLDKFIEDARVLYSSEAFPTNFGDPEAAKSLINDYVKKKTQGKIEELFKDL 193
Query: 668 SPDTVLVLVNCIYFKAKWKMPFHPSFTTEADFHVSKNRTVRVPMMGITGRIVPYCMDQEL 847
SP TVLVLVN IYFKA+WK F P T +A+FHVS N+TV VPMM + PY D+EL
Sbjct: 194 SPRTVLVLVNYIYFKAQWKTRFDPKHTEQAEFHVSDNKTVEVPMMTLDLE-TPYFRDEEL 252
Query: 848 ACSVVELPY 874
C++VEL Y
Sbjct: 253 GCTLVELTY 261
Score = 48.9 bits (115), Expect(2) = 2e-89
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 880 HDCTLFILSDDGMMEDVGAKLLPDTLMRWRDSLQPR 987
+D LFIL D G M+D+ AKL P+ L RWR+SLQPR
Sbjct: 264 NDSALFILPDKGKMQDLEAKLTPEMLTRWRNSLQPR 299
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 39,322,579
Number of extensions: 1142739
Number of successful extensions: 6987
Number of sequences better than 1.0e-05: 87
Number of HSP's gapped: 6805
Number of HSP's successfully gapped: 103
Length of query: 333
Length of database: 17,681,374
Length adjustment: 103
Effective length of query: 230
Effective length of database: 14,273,310
Effective search space: 3282861300
Effective search space used: 3282861300
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-000822
(999 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_537546.2| PREDICTED: similar to Alpha-1-antichymotrypsin ... 286 5e-85
Alignment gi|XP_547960.2| PREDICTED: similar to Corticosteroid-binding gl... 209 1e-56
Alignment gi|NP_001073578.1| serpin peptidase inhibitor, clade A (alpha-1... 210 6e-55
Alignment gi|XP_537544.2| PREDICTED: similar to serine (or cysteine) prot... 209 1e-54
Alignment gi|XP_547962.2| PREDICTED: similar to serine (or cysteine) prot... 194 3e-52
Alignment gi|XP_538128.1| PREDICTED: similar to Thyroxine-binding globuli... 199 6e-52
Alignment gi|XP_855206.1| PREDICTED: similar to serine (or cysteine) prot... 183 2e-49
Alignment gi|XP_855210.1| PREDICTED: similar to serine (or cysteine) prot... 182 8e-48
Alignment gi|XP_537545.1| PREDICTED: similar to serine (or cysteine) prot... 176 2e-44
Alignment gi|XP_855208.1| PREDICTED: similar to Corticosteroid-binding gl... 148 7e-36
>ref|XP_537546.2| PREDICTED: similar to Alpha-1-antichymotrypsin precursor (ACT)
[Canis familiaris].
Length = 421
Score = 286 bits (732), Expect(2) = 5e-85
Identities = 149/252 (59%), Positives = 185/252 (73%)
Frame = +2
Query: 119 CSRVHCLPADDLASKTVTLKGQIKKLPAHNTAVVSSNTDFAFSLYKQLVSLDPSKNVIFS 298
C VHCLP + VT + + ++ + SSNTDF SLYK+L S P KNVIFS
Sbjct: 15 CPTVHCLPEGMRDPENVTQEDLPNETSENSLRLASSNTDFTLSLYKELASKSPDKNVIFS 74
Query: 299 PLSVSIALAFLSLGARGPTLIELLEGLKFNLTKTPEAEIHQGFQHLLRALSQPSNLLQLN 478
P+S+SIALAFLSLGA+G T E+LEGLKFNLT+ P+ EIH+GFQHLLRAL QPS+ LQL+
Sbjct: 75 PMSISIALAFLSLGAQGTTQTEILEGLKFNLTEIPDREIHRGFQHLLRALHQPSSELQLS 134
Query: 479 VGNAMFVDERLKLLDKFVQDAHELYFSEAFSISFKDSDAAIEFINNYVKNKTKGKIVDLF 658
VGNAMFV E+LKLL+ FV+DA LY SEAFS +F++S AA + IN+YVKN+T+GKIVDL
Sbjct: 135 VGNAMFVGEQLKLLETFVEDARALYASEAFSTNFQNSAAAEKLINDYVKNRTQGKIVDLV 194
Query: 659 KQLSPDTVLVLVNCIYFKAKWKMPFHPSFTTEADFHVSKNRTVRVPMMGITGRIVPYCMD 838
K L T +VLVN I+ KAKWK PF P T ++ F VSK+R+V+VPMM + VPY D
Sbjct: 195 KDLDLHTAVVLVNYIFLKAKWKTPFDPRDTFKSKFQVSKSRSVKVPMMNLEDVWVPYFRD 254
Query: 839 QELACSVVELPY 874
L+C+VVEL Y
Sbjct: 255 DALSCTVVELQY 266
Score = 47.8 bits (112), Expect(2) = 5e-85
Identities = 23/38 (60%), Positives = 27/38 (71%)
Frame = +1
Query: 880 HDCTLFILSDDGMMEDVGAKLLPDTLMRWRDSLQPRRI 993
+D LF+L D+G ME V A LLP+TL RW SLQ RRI
Sbjct: 269 NDSALFVLPDEGRMEAVEAMLLPETLRRWTHSLQMRRI 306
>ref|XP_547960.2| PREDICTED: similar to Corticosteroid-binding globulin precursor
(CBG) (Transcortin) [Canis familiaris].
Length = 404
Score = 209 bits (532), Expect(2) = 1e-56
Identities = 105/216 (48%), Positives = 142/216 (65%)
Frame = +2
Query: 227 NTDFAFSLYKQLVSLDPSKNVIFSPLSVSIALAFLSLGARGPTLIELLEGLKFNLTKTPE 406
N DFAF+LY+ LV+ P KNV SP+S+S+ALA LSLGA G T ++LL+GL FNLTK E
Sbjct: 42 NVDFAFNLYRHLVASSPDKNVFISPVSISMALAMLSLGACGYTRVQLLQGLGFNLTKMSE 101
Query: 407 AEIHQGFQHLLRALSQPSNLLQLNVGNAMFVDERLKLLDKFVQDAHELYFSEAFSISFKD 586
AEIHQGF+HL L + +L++ +GNA+F+D L+LL+ F D Y EA++ F+D
Sbjct: 102 AEIHQGFRHLRHLLEKSDTMLEMTMGNALFLDRSLELLEPFSADTKHYYDLEAWATDFQD 161
Query: 587 SDAAIEFINNYVKNKTKGKIVDLFKQLSPDTVLVLVNCIYFKAKWKMPFHPSFTTEADFH 766
A IN Y+KNKT+GKIVDL +L +++LVN I+FK W+ PF P T E DF+
Sbjct: 162 GTGASRQINEYIKNKTQGKIVDLLSKLDSSAMVILVNYIFFKGTWEHPFDPESTREEDFY 221
Query: 767 VSKNRTVRVPMMGITGRIVPYCMDQELACSVVELPY 874
V++ VRVP M + + DQ L C +V+L Y
Sbjct: 222 VNETTVVRVPTM-FQSSTIKHLNDQVLPCQLVQLEY 256
Score = 29.6 bits (65), Expect(2) = 1e-56
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +1
Query: 895 FILSDDGMMEDVGAKLLPDTLMRWRDS 975
FIL ++G M+ V A L DT+ RW +S
Sbjct: 264 FILPEEGKMDTVIAALSRDTIQRWSES 290
>ref|NP_001073578.1| serpin peptidase inhibitor, clade A (alpha-1 antiproteinase,
antitrypsin), member 1 [Canis lupus familiaris].
Length = 415
Score = 210 bits (535), Expect(2) = 6e-55
Identities = 103/209 (49%), Positives = 142/209 (67%), Gaps = 3/209 (1%)
Frame = +2
Query: 197 PAHNTA---VVSSNTDFAFSLYKQLVSLDPSKNVIFSPLSVSIALAFLSLGARGPTLIEL 367
P H A + + DFAFSLY+Q+ + N+ FSP+S++ A A LSLG +G T ++
Sbjct: 38 PEHQPACHKIAPNLADFAFSLYRQVAQESNTTNIFFSPVSIATAFAMLSLGTKGDTHTQI 97
Query: 368 LEGLKFNLTKTPEAEIHQGFQHLLRALSQPSNLLQLNVGNAMFVDERLKLLDKFVQDAHE 547
++GL FNLT+ E E+HQGF LL L+QP N LQL G+ +F+++ +KLL+KF++D
Sbjct: 98 MQGLGFNLTERAEREVHQGFHQLLSILNQPDNQLQLTTGSGLFINDTIKLLNKFLEDVRN 157
Query: 548 LYFSEAFSISFKDSDAAIEFINNYVKNKTKGKIVDLFKQLSPDTVLVLVNCIYFKAKWKM 727
LY SEAF+I+F+ ++ A + INNYV+ T+GKIVDL K L DTV LVN I+FK KW+
Sbjct: 158 LYHSEAFTINFRHTEEAKKQINNYVEKGTQGKIVDLVKDLDEDTVFALVNYIFFKGKWEK 217
Query: 728 PFHPSFTTEADFHVSKNRTVRVPMMGITG 814
PF TTE DFHV ++ TV+VPMM G
Sbjct: 218 PFEVEHTTEEDFHVDEHTTVKVPMMSRLG 246
Score = 23.1 bits (48), Expect(2) = 6e-55
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +1
Query: 895 FILSDDGMMEDVGAKLLPDTLMRWRDSLQPR 987
FIL D+G M+ + +KL + L ++ + R
Sbjct: 273 FILPDEGKMQHLESKLTKEVLAKFLEKRYAR 303
>ref|XP_537544.2| PREDICTED: similar to serine (or cysteine) proteinase inhibitor,
clade A (alpha-1 antiproteinase, antitrypsin), member 9
[Canis familiaris].
Length = 418
Score = 209 bits (532), Expect(2) = 1e-54
Identities = 114/250 (45%), Positives = 154/250 (61%), Gaps = 1/250 (0%)
Frame = +2
Query: 128 VHCLPADDLASKTVTLKGQIKKLPAHNTAVVSSNTDFAFSLYKQLVSLDPSKNVIFSPLS 307
++C+P SK + A + SSNTDFAF LY++L+ P +NV FSPLS
Sbjct: 18 IYCVPPPRAPSKGSPCMSSTRSTAASQLS--SSNTDFAFRLYQRLILKTPDQNVFFSPLS 75
Query: 308 VSIALAFLSLGARGPTLIELLEGLKFNLTKTPEAEIHQGFQHLLRALSQPSNLLQLNVGN 487
VS LA LSLGAR T ++L+GL FNLT PE+ IHQ FQHLL +L P L L +G+
Sbjct: 76 VSACLAMLSLGARSATKTQILQGLGFNLTHLPESSIHQAFQHLLHSLRVPGKDLDLRMGS 135
Query: 488 AMFVDERLKLLDKFVQDAHELYFSEAFSISFKDSDAAIEFINNYVKNKTKGKIVDLFKQL 667
+F+ + L L F+ D LY S+ FS F S A E IN+YV+ +TKGK+V+L + L
Sbjct: 136 VLFIKKELWLQTNFLDDVKRLYESKVFSTDFSSSSTAREKINSYVEKETKGKVVNLIQSL 195
Query: 668 SPDTVLVLVNCIYFKAKWKMPFHPSFTTEAD-FHVSKNRTVRVPMMGITGRIVPYCMDQE 844
P TV+VLVN I+FK KW+ PF+P +T+++ F V K TV+VPMM + +D E
Sbjct: 196 EPLTVMVLVNHIFFKGKWEKPFNPGYTSKSSPFLVGKRTTVKVPMMHQVEEFA-FGVDAE 254
Query: 845 LACSVVELPY 874
L CSV+ + Y
Sbjct: 255 LKCSVLRMDY 264
Score = 23.5 bits (49), Expect(2) = 1e-54
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = +1
Query: 895 FILSDDGMMEDVGAKLLPDTLMRWRDSLQPRRI 993
F+L G M + L TL +W LQ R I
Sbjct: 272 FVLPGQGKMRQLEQALSSRTLRKWNHLLQKRWI 304
>ref|XP_547962.2| PREDICTED: similar to serine (or cysteine) proteinase inhibitor,
clade A (alpha-1 antiproteinase, antitrypsin), member 4
[Canis familiaris].
Length = 417
Score = 194 bits (493), Expect(2) = 3e-52
Identities = 97/220 (44%), Positives = 139/220 (63%)
Frame = +2
Query: 215 VVSSNTDFAFSLYKQLVSLDPSKNVIFSPLSVSIALAFLSLGARGPTLIELLEGLKFNLT 394
+ NT FA Y + S P N+ FSPLS+S + A LSLGAR + ++LEGL FNLT
Sbjct: 45 IAPGNTAFALHFYHLMASQSPGSNIFFSPLSISASYAMLSLGARSHSKTQILEGLGFNLT 104
Query: 395 KTPEAEIHQGFQHLLRALSQPSNLLQLNVGNAMFVDERLKLLDKFVQDAHELYFSEAFSI 574
+ E++IH+GFQHLL L P + L++++G+ +F+ + L +L +F+ D+ Y S+ F
Sbjct: 105 EVSESDIHRGFQHLLHTLHLPDDRLEMHMGSTLFLSQDLLILPEFLNDSVAFYDSKLFLT 164
Query: 575 SFKDSDAAIEFINNYVKNKTKGKIVDLFKQLSPDTVLVLVNCIYFKAKWKMPFHPSFTTE 754
+F D + IN+++K +T+GKIVDL +L+ D +VLVN IYFKA W+ PF PS TT
Sbjct: 165 NFHDPVGTTQLINDHIKEETQGKIVDLVSKLNTDIAMVLVNYIYFKALWEKPFQPSMTTT 224
Query: 755 ADFHVSKNRTVRVPMMGITGRIVPYCMDQELACSVVELPY 874
DFHV +N V+VPMM Y D+ L CSV+ + Y
Sbjct: 225 QDFHVDENTVVQVPMMLQDTAHHWYLNDRYLPCSVLRMDY 264
Score = 30.0 bits (66), Expect(2) = 3e-52
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +1
Query: 895 FILSDDGMMEDVGAKLLPDTLMRWRDSLQPRRI 993
FIL + G M+ V L P+ L RW LQ R++
Sbjct: 272 FILPNRGKMKQVEEALTPEMLTRWNRLLQKRKL 304
>ref|XP_538128.1| PREDICTED: similar to Thyroxine-binding globulin precursor
(T4-binding globulin) [Canis familiaris].
Length = 414
Score = 199 bits (507), Expect(2) = 6e-52
Identities = 108/250 (43%), Positives = 156/250 (62%), Gaps = 1/250 (0%)
Frame = +2
Query: 128 VHCLPADDLASKTVTLKGQIKKLPAHNTAVVSSNTDFAFSLYKQLVSLDPSKNVIFSPLS 307
+HC + K +T K + + S N DFAF+LY++ P +N+ FSP+S
Sbjct: 14 LHCASSIRSEGKVITCNSPPKNATFYKMS--SINADFAFNLYRRFTVETPDRNIFFSPVS 71
Query: 308 VSIALAFLSLGARGPTLIELLEGLKFNLTKTPEAEIHQGFQHLLRALSQPSNLLQLNVGN 487
+S ALA LS GA T I++LE L FNLT TP AEI QGFQHL+ +L+ P L+L +GN
Sbjct: 72 ISAALAMLSFGACYSTQIQILESLGFNLTDTPMAEIQQGFQHLICSLNIPKKELELQMGN 131
Query: 488 AMFVDERLKLLDKFVQDAHELYFSEAFSISFKDSDAAIEFINNYVKNKTKGKIVDLFKQL 667
+F+ ++LK L +F+ D LY +E FS F + AA + IN++V+ +TKG++V L + L
Sbjct: 132 TLFIGKQLKPLAQFLDDVKSLYATEVFSTDFSNVSAAQQLINSHVEKQTKGEVVGLIQDL 191
Query: 668 SPDTVLVLVNCIYFKAKWKMPFHPSFTTEA-DFHVSKNRTVRVPMMGITGRIVPYCMDQE 844
P+T++VLVN I+FKA+W PF PS T E F V K TV+VPMM + + +D E
Sbjct: 192 KPNTIMVLVNYIHFKAQWANPFDPSKTEEGFSFSVDKTTTVKVPMMHQMEQYY-HLVDTE 250
Query: 845 LACSVVELPY 874
L C+V+++ Y
Sbjct: 251 LNCTVLQMDY 260
Score = 23.9 bits (50), Expect(2) = 6e-52
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +1
Query: 892 LFILSDDGMMEDVGAKLLPDTLMRWRDSLQ 981
LF+L +G +E V + TL +W LQ
Sbjct: 267 LFVLPKEGQIEWVEGAMSSKTLKKWNRLLQ 296
>ref|XP_855206.1| PREDICTED: similar to serine (or cysteine) proteinase inhibitor,
clade A (alpha-1 antiproteinase, antitrypsin), member 11
[Canis familiaris].
Length = 422
Score = 183 bits (464), Expect(2) = 2e-49
Identities = 99/227 (43%), Positives = 152/227 (66%), Gaps = 1/227 (0%)
Frame = +2
Query: 197 PAHNTAVVSSNTDFAFSLYKQLVSLDPSKNVIFSPLSVSIALAFLSLGARGPTLIELLEG 376
PA++ + + T+FA LYKQL + + S N+ FSP+S+S +LA LSLGA+ T ++LEG
Sbjct: 45 PAYHK-ITPTITNFALHLYKQLAA-ETSGNIFFSPVSISTSLALLSLGAQVNTSTQILEG 102
Query: 377 LKFNLTKTPEAEIHQGFQHLLRALSQPSNLLQLNVGNAMFVDERLKLLDKFVQDAHELYF 556
L FNLT+TPEA+IH+GFQ L+ L PS+ L+L VGN++F+D++LK F+ ELY
Sbjct: 103 LGFNLTETPEADIHRGFQSLIHTLDLPSSKLELKVGNSLFLDKQLKPQQHFLDTIRELYG 162
Query: 557 SEAFSISFKDSDAAIEFINNYVKNKTKGKIVDLFKQLSPDTVLVLVNCIYFKAKWKMPFH 736
+ AFS +F DS IN YV+ +T G++ D ++ + DT++VL+N I+FKAKWK PF
Sbjct: 163 AFAFSANFTDSATTRRQINEYVRKQTYGQVADGLQEFTQDTLMVLLNYIFFKAKWKHPFS 222
Query: 737 PSFTTEAD-FHVSKNRTVRVPMMGITGRIVPYCMDQELACSVVELPY 874
T + + F V++ ++ +PMM + + DQE+AC+V+++ Y
Sbjct: 223 RYQTQKQESFSVNERTSLHIPMMH-QKEMHRFLYDQEMACTVLQIEY 268
Score = 32.3 bits (72), Expect(2) = 2e-49
Identities = 16/31 (51%), Positives = 18/31 (58%)
Frame = +1
Query: 892 LFILSDDGMMEDVGAKLLPDTLMRWRDSLQP 984
L IL D G ME V A L P+TL +W L P
Sbjct: 275 LLILPDPGKMEQVEAALQPETLRKWDQWLLP 305
>ref|XP_855210.1| PREDICTED: similar to serine (or cysteine) proteinase inhibitor,
clade A (alpha-1 antiproteinase, antitrypsin), member 12
[Canis familiaris].
Length = 414
Score = 182 bits (462), Expect(2) = 8e-48
Identities = 93/235 (39%), Positives = 147/235 (62%), Gaps = 2/235 (0%)
Frame = +2
Query: 176 KGQIKKLPAHNTA--VVSSNTDFAFSLYKQLVSLDPSKNVIFSPLSVSIALAFLSLGARG 349
K QI+ A ++ NTDF LY++L S P KN+ FSPLS+S A + LSLGA+
Sbjct: 33 KSQIQSWKGMKAAEGLIKRNTDFGCKLYRKLASNSPRKNIFFSPLSISAAFSMLSLGAQD 92
Query: 350 PTLIELLEGLKFNLTKTPEAEIHQGFQHLLRALSQPSNLLQLNVGNAMFVDERLKLLDKF 529
TL E+ +G FN PE +IH+GF +L+ ++Q S L+L++ N +F+D++L+ KF
Sbjct: 93 STLDEIKQG--FNFRNMPERDIHEGFHYLIYRMNQGSQDLELHLRNTLFIDQKLQPEKKF 150
Query: 530 VQDAHELYFSEAFSISFKDSDAAIEFINNYVKNKTKGKIVDLFKQLSPDTVLVLVNCIYF 709
+ + LY ++ +F++ + IN+YV KT+GKI +L K + P TV++L NCI+F
Sbjct: 151 LTNVKNLYSADTVPTNFQNLGDTRKQINDYVSQKTQGKINNLIKNIDPGTVMLLTNCIFF 210
Query: 710 KAKWKMPFHPSFTTEADFHVSKNRTVRVPMMGITGRIVPYCMDQELACSVVELPY 874
+A+W+ F P T E DF + N+ V+VPMM G + D++L+C+++E+PY
Sbjct: 211 RARWQHEFDPKITKEEDFFLDGNQRVKVPMM-FRGGMYETGYDEQLSCTILEMPY 264
Score = 27.3 bits (59), Expect(2) = 8e-48
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +1
Query: 895 FILSDDGMMEDVGAKLLPDTLMRWRDSLQPR 987
FIL D+G M+ V L DT RW+ + R
Sbjct: 272 FILPDEGKMKTVEEALKADTFDRWKKLITRR 302
>ref|XP_537545.1| PREDICTED: similar to serine (or cysteine) proteinase inhibitor,
clade A (alpha-1 antiproteinase, antitrypsin), member 5
[Canis familiaris].
Length = 407
Score = 176 bits (447), Expect(2) = 2e-44
Identities = 96/233 (41%), Positives = 141/233 (60%)
Frame = +2
Query: 176 KGQIKKLPAHNTAVVSSNTDFAFSLYKQLVSLDPSKNVIFSPLSVSIALAFLSLGARGPT 355
K ++K+ P +T V ++ DFAF LY+ L + P +N+ FSPLS+S LA LSLGA T
Sbjct: 28 KKRVKEPPVAST-VAPASRDFAFDLYRALATAAPDQNIFFSPLSISTTLAMLSLGAGSST 86
Query: 356 LIELLEGLKFNLTKTPEAEIHQGFQHLLRALSQPSNLLQLNVGNAMFVDERLKLLDKFVQ 535
+++LEGL + + E +H+ LL +QP +QL++GNA+F+ ++L D F+Q
Sbjct: 87 KVQILEGLGLHPQEGLEEALHRRIHQLLWDFAQPREDIQLSLGNALFISPTVRLQDTFLQ 146
Query: 536 DAHELYFSEAFSISFKDSDAAIEFINNYVKNKTKGKIVDLFKQLSPDTVLVLVNCIYFKA 715
LY ++ F +F D A + IN+YV +TKGKIVDL K L +V+VN I+FKA
Sbjct: 147 AVKMLYLADTFPTNFGDPAGAQKQINDYVAKQTKGKIVDLAKDLDSTEAMVMVNYIFFKA 206
Query: 716 KWKMPFHPSFTTEADFHVSKNRTVRVPMMGITGRIVPYCMDQELACSVVELPY 874
KW+ F+ T + DFHV+ V+VPMM Y +D+ L+C VV +PY
Sbjct: 207 KWETGFNHKSTRKQDFHVTSEMVVQVPMMKQEDHYY-YYVDRNLSCRVVGVPY 258
Score = 21.6 bits (44), Expect(2) = 2e-44
Identities = 10/42 (23%), Positives = 18/42 (42%)
Frame = +1
Query: 868 PVHRHDCTLFILSDDGMMEDVGAKLLPDTLMRWRDSLQPRRI 993
P + LF+L +G M + + TL +W R++
Sbjct: 257 PYRGNATALFVLPGEGQMGQLENGMSEKTLKKWLKMFTKRQL 298
>ref|XP_855208.1| PREDICTED: similar to Corticosteroid-binding globulin precursor
(CBG) (Transcortin) [Canis familiaris].
Length = 471
Score = 148 bits (374), Expect = 7e-36
Identities = 83/226 (36%), Positives = 128/226 (56%)
Frame = +2
Query: 197 PAHNTAVVSSNTDFAFSLYKQLVSLDPSKNVIFSPLSVSIALAFLSLGARGPTLIELLEG 376
P H+ + + N FA L+K L+ P KN+IFSPLS+S + A LSLG R TL LLEG
Sbjct: 93 PVHHK-IEAGNKAFAHKLFKTLLMEHPRKNIIFSPLSISASFAMLSLGTRSTTLTNLLEG 151
Query: 377 LKFNLTKTPEAEIHQGFQHLLRALSQPSNLLQLNVGNAMFVDERLKLLDKFVQDAHELYF 556
L F+L ++H GFQ +++ L Q + L + +F+D K+ F+ D +Y
Sbjct: 152 LGFDLKVIKVWDVHHGFQSVIQMLKQLNRAGHLMHRDMLFIDSNRKINSPFLWDTQAMYD 211
Query: 557 SEAFSISFKDSDAAIEFINNYVKNKTKGKIVDLFKQLSPDTVLVLVNCIYFKAKWKMPFH 736
A I F+D + IN++V KT + +L L+P T L LV+ ++FK W+M FH
Sbjct: 212 VRARMIDFRDVVKTKKQINHFVAEKTHKRTKELITSLNPHTFLFLVDYVFFKGTWEMAFH 271
Query: 737 PSFTTEADFHVSKNRTVRVPMMGITGRIVPYCMDQELACSVVELPY 874
+ + DF V K+ TV V M+ TG+++ Y +EL ++V++P+
Sbjct: 272 SNLMHKEDFFVDKHTTVPVDMIWKTGQMI-YSRSEELFATMVKIPF 316
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 41,028,838
Number of extensions: 1183975
Number of successful extensions: 7068
Number of sequences better than 1.0e-05: 45
Number of HSP's gapped: 6920
Number of HSP's successfully gapped: 56
Length of query: 333
Length of database: 18,874,504
Length adjustment: 103
Effective length of query: 230
Effective length of database: 15,440,896
Effective search space: 3551406080
Effective search space used: 3551406080
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-000822
(999 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001076.2| alpha-1-antichymotrypsin precursor [Homo sapien... 275 9e-81
Alignment gi|NP_001747.2| corticosteroid-binding globulin precursor [Homo... 212 8e-57
Alignment gi|NP_001002236.1| alpha-1-antitrypsin precursor [Homo sapiens]. 215 4e-56
Alignment gi|NP_001002235.1| alpha-1-antitrypsin precursor [Homo sapiens]. 215 4e-56
Alignment gi|NP_000286.3| alpha-1-antitrypsin precursor [Homo sapiens]. 215 4e-56
Alignment gi|NP_001121179.1| alpha-1-antitrypsin precursor [Homo sapiens]. 215 4e-56
Alignment gi|NP_001121178.1| alpha-1-antitrypsin precursor [Homo sapiens]. 215 4e-56
Alignment gi|NP_001121177.1| alpha-1-antitrypsin precursor [Homo sapiens]. 215 4e-56
Alignment gi|NP_001121176.1| alpha-1-antitrypsin precursor [Homo sapiens]. 215 4e-56
Alignment gi|NP_001121175.1| alpha-1-antitrypsin precursor [Homo sapiens]. 215 4e-56
>ref|NP_001076.2| alpha-1-antichymotrypsin precursor [Homo sapiens].
Length = 423
Score = 275 bits (702), Expect(2) = 9e-81
Identities = 144/252 (57%), Positives = 181/252 (71%)
Frame = +2
Query: 119 CSRVHCLPADDLASKTVTLKGQIKKLPAHNTAVVSSNTDFAFSLYKQLVSLDPSKNVIFS 298
C V C P L + +T + Q + + + S+N DFAFSLYKQLV P KNVIFS
Sbjct: 18 CPAVLCHPNSPLDEENLTQENQDRGTHV-DLGLASANVDFAFSLYKQLVLKAPDKNVIFS 76
Query: 299 PLSVSIALAFLSLGARGPTLIELLEGLKFNLTKTPEAEIHQGFQHLLRALSQPSNLLQLN 478
PLS+S ALAFLSLGA TL E+L+GLKFNLT+T EAEIHQ FQHLLR L+Q S+ LQL+
Sbjct: 77 PLSISTALAFLSLGAHNTTLTEILKGLKFNLTETSEAEIHQSFQHLLRTLNQSSDELQLS 136
Query: 479 VGNAMFVDERLKLLDKFVQDAHELYFSEAFSISFKDSDAAIEFINNYVKNKTKGKIVDLF 658
+GNAMFV E+L LLD+F +DA LY SEAF+ F+DS AA + IN+YVKN T+GKI DL
Sbjct: 137 MGNAMFVKEQLSLLDRFTEDAKRLYGSEAFATDFQDSAAAKKLINDYVKNGTRGKITDLI 196
Query: 659 KQLSPDTVLVLVNCIYFKAKWKMPFHPSFTTEADFHVSKNRTVRVPMMGITGRIVPYCMD 838
K L T++VLVN I+FKAKW+MPF P T ++ F++SK + V VPMM + +PY D
Sbjct: 197 KDLDSQTMMVLVNYIFFKAKWEMPFDPQDTHQSRFYLSKKKWVMVPMMSLHHLTIPYFRD 256
Query: 839 QELACSVVELPY 874
+EL+C+VVEL Y
Sbjct: 257 EELSCTVVELKY 268
Score = 45.1 bits (105), Expect(2) = 9e-81
Identities = 22/34 (64%), Positives = 25/34 (73%)
Frame = +1
Query: 892 LFILSDDGMMEDVGAKLLPDTLMRWRDSLQPRRI 993
LFIL D ME+V A LLP+TL RWRDSL+ R I
Sbjct: 275 LFILPDQDKMEEVEAMLLPETLKRWRDSLEFREI 308
>ref|NP_001747.2| corticosteroid-binding globulin precursor [Homo sapiens].
Length = 405
Score = 212 bits (540), Expect(2) = 8e-57
Identities = 108/224 (48%), Positives = 147/224 (65%)
Frame = +2
Query: 203 HNTAVVSSNTDFAFSLYKQLVSLDPSKNVIFSPLSVSIALAFLSLGARGPTLIELLEGLK 382
H+ + S+N DFAFSLYK LV+L P KN+ SP+S+S+ALA LSLG G T +LL+GL
Sbjct: 35 HHRGLASANVDFAFSLYKHLVALSPKKNIFISPVSISMALAMLSLGTCGHTRAQLLQGLG 94
Query: 383 FNLTKTPEAEIHQGFQHLLRALSQPSNLLQLNVGNAMFVDERLKLLDKFVQDAHELYFSE 562
FNLT+ E EIHQGFQHL + ++ L++ +GNA+F+D L+LL+ F D Y SE
Sbjct: 95 FNLTERSETEIHQGFQHLHQLFAKSDTSLEMTMGNALFLDGSLELLESFSADIKHYYESE 154
Query: 563 AFSISFKDSDAAIEFINNYVKNKTKGKIVDLFKQLSPDTVLVLVNCIYFKAKWKMPFHPS 742
+++F+D A IN+YVKNKT+GKIVDLF L +LVLVN I+FK W PF +
Sbjct: 155 VLAMNFQDWATASRQINSYVKNKTQGKIVDLFSGLDSPAILVLVNYIFFKGTWTQPFDLA 214
Query: 743 FTTEADFHVSKNRTVRVPMMGITGRIVPYCMDQELACSVVELPY 874
T E +F+V + V+VPMM + + Y D EL C +V++ Y
Sbjct: 215 STREENFYVDETTVVKVPMM-LQSSTISYLHDAELPCQLVQMNY 257
Score = 27.3 bits (59), Expect(2) = 8e-57
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +1
Query: 895 FILSDDGMMEDVGAKLLPDTLMRWRDSLQPRRI 993
FIL D G M V A L DT+ RW L ++
Sbjct: 265 FILPDKGKMNTVIAALSRDTINRWSAGLTSSQV 297
>ref|NP_001002236.1| alpha-1-antitrypsin precursor [Homo sapiens].
Length = 418
Score = 215 bits (548), Expect = 4e-56
Identities = 113/221 (51%), Positives = 149/221 (67%)
Frame = +2
Query: 140 PADDLASKTVTLKGQIKKLPAHNTAVVSSNTDFAFSLYKQLVSLDPSKNVIFSPLSVSIA 319
P D A KT T + P N + + +FAFSLY+QL S N+ FSP+S++ A
Sbjct: 27 PQGDAAQKTDTSHHD-QDHPTFNK-ITPNLAEFAFSLYRQLAHQSNSTNIFFSPVSIATA 84
Query: 320 LAFLSLGARGPTLIELLEGLKFNLTKTPEAEIHQGFQHLLRALSQPSNLLQLNVGNAMFV 499
A LSLG + T E+LEGL FNLT+ PEA+IH+GFQ LLR L+QP + LQL GN +F+
Sbjct: 85 FAMLSLGTKADTHDEILEGLNFNLTEIPEAQIHEGFQELLRTLNQPDSQLQLTTGNGLFL 144
Query: 500 DERLKLLDKFVQDAHELYFSEAFSISFKDSDAAIEFINNYVKNKTKGKIVDLFKQLSPDT 679
E LKL+DKF++D +LY SEAF+++F D++ A + IN+YV+ T+GKIVDL K+L DT
Sbjct: 145 SEGLKLVDKFLEDVKKLYHSEAFTVNFGDTEEAKKQINDYVEKGTQGKIVDLVKELDRDT 204
Query: 680 VLVLVNCIYFKAKWKMPFHPSFTTEADFHVSKNRTVRVPMM 802
V LVN I+FK KW+ PF T E DFHV + TV+VPMM
Sbjct: 205 VFALVNYIFFKGKWERPFEVKDTEEEDFHVDQVTTVKVPMM 245
>ref|NP_001002235.1| alpha-1-antitrypsin precursor [Homo sapiens].
Length = 418
Score = 215 bits (548), Expect = 4e-56
Identities = 113/221 (51%), Positives = 149/221 (67%)
Frame = +2
Query: 140 PADDLASKTVTLKGQIKKLPAHNTAVVSSNTDFAFSLYKQLVSLDPSKNVIFSPLSVSIA 319
P D A KT T + P N + + +FAFSLY+QL S N+ FSP+S++ A
Sbjct: 27 PQGDAAQKTDTSHHD-QDHPTFNK-ITPNLAEFAFSLYRQLAHQSNSTNIFFSPVSIATA 84
Query: 320 LAFLSLGARGPTLIELLEGLKFNLTKTPEAEIHQGFQHLLRALSQPSNLLQLNVGNAMFV 499
A LSLG + T E+LEGL FNLT+ PEA+IH+GFQ LLR L+QP + LQL GN +F+
Sbjct: 85 FAMLSLGTKADTHDEILEGLNFNLTEIPEAQIHEGFQELLRTLNQPDSQLQLTTGNGLFL 144
Query: 500 DERLKLLDKFVQDAHELYFSEAFSISFKDSDAAIEFINNYVKNKTKGKIVDLFKQLSPDT 679
E LKL+DKF++D +LY SEAF+++F D++ A + IN+YV+ T+GKIVDL K+L DT
Sbjct: 145 SEGLKLVDKFLEDVKKLYHSEAFTVNFGDTEEAKKQINDYVEKGTQGKIVDLVKELDRDT 204
Query: 680 VLVLVNCIYFKAKWKMPFHPSFTTEADFHVSKNRTVRVPMM 802
V LVN I+FK KW+ PF T E DFHV + TV+VPMM
Sbjct: 205 VFALVNYIFFKGKWERPFEVKDTEEEDFHVDQVTTVKVPMM 245
>ref|NP_000286.3| alpha-1-antitrypsin precursor [Homo sapiens].
Length = 418
Score = 215 bits (548), Expect = 4e-56
Identities = 113/221 (51%), Positives = 149/221 (67%)
Frame = +2
Query: 140 PADDLASKTVTLKGQIKKLPAHNTAVVSSNTDFAFSLYKQLVSLDPSKNVIFSPLSVSIA 319
P D A KT T + P N + + +FAFSLY+QL S N+ FSP+S++ A
Sbjct: 27 PQGDAAQKTDTSHHD-QDHPTFNK-ITPNLAEFAFSLYRQLAHQSNSTNIFFSPVSIATA 84
Query: 320 LAFLSLGARGPTLIELLEGLKFNLTKTPEAEIHQGFQHLLRALSQPSNLLQLNVGNAMFV 499
A LSLG + T E+LEGL FNLT+ PEA+IH+GFQ LLR L+QP + LQL GN +F+
Sbjct: 85 FAMLSLGTKADTHDEILEGLNFNLTEIPEAQIHEGFQELLRTLNQPDSQLQLTTGNGLFL 144
Query: 500 DERLKLLDKFVQDAHELYFSEAFSISFKDSDAAIEFINNYVKNKTKGKIVDLFKQLSPDT 679
E LKL+DKF++D +LY SEAF+++F D++ A + IN+YV+ T+GKIVDL K+L DT
Sbjct: 145 SEGLKLVDKFLEDVKKLYHSEAFTVNFGDTEEAKKQINDYVEKGTQGKIVDLVKELDRDT 204
Query: 680 VLVLVNCIYFKAKWKMPFHPSFTTEADFHVSKNRTVRVPMM 802
V LVN I+FK KW+ PF T E DFHV + TV+VPMM
Sbjct: 205 VFALVNYIFFKGKWERPFEVKDTEEEDFHVDQVTTVKVPMM 245
>ref|NP_001121179.1| alpha-1-antitrypsin precursor [Homo sapiens].
Length = 418
Score = 215 bits (548), Expect = 4e-56
Identities = 113/221 (51%), Positives = 149/221 (67%)
Frame = +2
Query: 140 PADDLASKTVTLKGQIKKLPAHNTAVVSSNTDFAFSLYKQLVSLDPSKNVIFSPLSVSIA 319
P D A KT T + P N + + +FAFSLY+QL S N+ FSP+S++ A
Sbjct: 27 PQGDAAQKTDTSHHD-QDHPTFNK-ITPNLAEFAFSLYRQLAHQSNSTNIFFSPVSIATA 84
Query: 320 LAFLSLGARGPTLIELLEGLKFNLTKTPEAEIHQGFQHLLRALSQPSNLLQLNVGNAMFV 499
A LSLG + T E+LEGL FNLT+ PEA+IH+GFQ LLR L+QP + LQL GN +F+
Sbjct: 85 FAMLSLGTKADTHDEILEGLNFNLTEIPEAQIHEGFQELLRTLNQPDSQLQLTTGNGLFL 144
Query: 500 DERLKLLDKFVQDAHELYFSEAFSISFKDSDAAIEFINNYVKNKTKGKIVDLFKQLSPDT 679
E LKL+DKF++D +LY SEAF+++F D++ A + IN+YV+ T+GKIVDL K+L DT
Sbjct: 145 SEGLKLVDKFLEDVKKLYHSEAFTVNFGDTEEAKKQINDYVEKGTQGKIVDLVKELDRDT 204
Query: 680 VLVLVNCIYFKAKWKMPFHPSFTTEADFHVSKNRTVRVPMM 802
V LVN I+FK KW+ PF T E DFHV + TV+VPMM
Sbjct: 205 VFALVNYIFFKGKWERPFEVKDTEEEDFHVDQVTTVKVPMM 245
>ref|NP_001121178.1| alpha-1-antitrypsin precursor [Homo sapiens].
Length = 418
Score = 215 bits (548), Expect = 4e-56
Identities = 113/221 (51%), Positives = 149/221 (67%)
Frame = +2
Query: 140 PADDLASKTVTLKGQIKKLPAHNTAVVSSNTDFAFSLYKQLVSLDPSKNVIFSPLSVSIA 319
P D A KT T + P N + + +FAFSLY+QL S N+ FSP+S++ A
Sbjct: 27 PQGDAAQKTDTSHHD-QDHPTFNK-ITPNLAEFAFSLYRQLAHQSNSTNIFFSPVSIATA 84
Query: 320 LAFLSLGARGPTLIELLEGLKFNLTKTPEAEIHQGFQHLLRALSQPSNLLQLNVGNAMFV 499
A LSLG + T E+LEGL FNLT+ PEA+IH+GFQ LLR L+QP + LQL GN +F+
Sbjct: 85 FAMLSLGTKADTHDEILEGLNFNLTEIPEAQIHEGFQELLRTLNQPDSQLQLTTGNGLFL 144
Query: 500 DERLKLLDKFVQDAHELYFSEAFSISFKDSDAAIEFINNYVKNKTKGKIVDLFKQLSPDT 679
E LKL+DKF++D +LY SEAF+++F D++ A + IN+YV+ T+GKIVDL K+L DT
Sbjct: 145 SEGLKLVDKFLEDVKKLYHSEAFTVNFGDTEEAKKQINDYVEKGTQGKIVDLVKELDRDT 204
Query: 680 VLVLVNCIYFKAKWKMPFHPSFTTEADFHVSKNRTVRVPMM 802
V LVN I+FK KW+ PF T E DFHV + TV+VPMM
Sbjct: 205 VFALVNYIFFKGKWERPFEVKDTEEEDFHVDQVTTVKVPMM 245
>ref|NP_001121177.1| alpha-1-antitrypsin precursor [Homo sapiens].
Length = 418
Score = 215 bits (548), Expect = 4e-56
Identities = 113/221 (51%), Positives = 149/221 (67%)
Frame = +2
Query: 140 PADDLASKTVTLKGQIKKLPAHNTAVVSSNTDFAFSLYKQLVSLDPSKNVIFSPLSVSIA 319
P D A KT T + P N + + +FAFSLY+QL S N+ FSP+S++ A
Sbjct: 27 PQGDAAQKTDTSHHD-QDHPTFNK-ITPNLAEFAFSLYRQLAHQSNSTNIFFSPVSIATA 84
Query: 320 LAFLSLGARGPTLIELLEGLKFNLTKTPEAEIHQGFQHLLRALSQPSNLLQLNVGNAMFV 499
A LSLG + T E+LEGL FNLT+ PEA+IH+GFQ LLR L+QP + LQL GN +F+
Sbjct: 85 FAMLSLGTKADTHDEILEGLNFNLTEIPEAQIHEGFQELLRTLNQPDSQLQLTTGNGLFL 144
Query: 500 DERLKLLDKFVQDAHELYFSEAFSISFKDSDAAIEFINNYVKNKTKGKIVDLFKQLSPDT 679
E LKL+DKF++D +LY SEAF+++F D++ A + IN+YV+ T+GKIVDL K+L DT
Sbjct: 145 SEGLKLVDKFLEDVKKLYHSEAFTVNFGDTEEAKKQINDYVEKGTQGKIVDLVKELDRDT 204
Query: 680 VLVLVNCIYFKAKWKMPFHPSFTTEADFHVSKNRTVRVPMM 802
V LVN I+FK KW+ PF T E DFHV + TV+VPMM
Sbjct: 205 VFALVNYIFFKGKWERPFEVKDTEEEDFHVDQVTTVKVPMM 245
>ref|NP_001121176.1| alpha-1-antitrypsin precursor [Homo sapiens].
Length = 418
Score = 215 bits (548), Expect = 4e-56
Identities = 113/221 (51%), Positives = 149/221 (67%)
Frame = +2
Query: 140 PADDLASKTVTLKGQIKKLPAHNTAVVSSNTDFAFSLYKQLVSLDPSKNVIFSPLSVSIA 319
P D A KT T + P N + + +FAFSLY+QL S N+ FSP+S++ A
Sbjct: 27 PQGDAAQKTDTSHHD-QDHPTFNK-ITPNLAEFAFSLYRQLAHQSNSTNIFFSPVSIATA 84
Query: 320 LAFLSLGARGPTLIELLEGLKFNLTKTPEAEIHQGFQHLLRALSQPSNLLQLNVGNAMFV 499
A LSLG + T E+LEGL FNLT+ PEA+IH+GFQ LLR L+QP + LQL GN +F+
Sbjct: 85 FAMLSLGTKADTHDEILEGLNFNLTEIPEAQIHEGFQELLRTLNQPDSQLQLTTGNGLFL 144
Query: 500 DERLKLLDKFVQDAHELYFSEAFSISFKDSDAAIEFINNYVKNKTKGKIVDLFKQLSPDT 679
E LKL+DKF++D +LY SEAF+++F D++ A + IN+YV+ T+GKIVDL K+L DT
Sbjct: 145 SEGLKLVDKFLEDVKKLYHSEAFTVNFGDTEEAKKQINDYVEKGTQGKIVDLVKELDRDT 204
Query: 680 VLVLVNCIYFKAKWKMPFHPSFTTEADFHVSKNRTVRVPMM 802
V LVN I+FK KW+ PF T E DFHV + TV+VPMM
Sbjct: 205 VFALVNYIFFKGKWERPFEVKDTEEEDFHVDQVTTVKVPMM 245
>ref|NP_001121175.1| alpha-1-antitrypsin precursor [Homo sapiens].
Length = 418
Score = 215 bits (548), Expect = 4e-56
Identities = 113/221 (51%), Positives = 149/221 (67%)
Frame = +2
Query: 140 PADDLASKTVTLKGQIKKLPAHNTAVVSSNTDFAFSLYKQLVSLDPSKNVIFSPLSVSIA 319
P D A KT T + P N + + +FAFSLY+QL S N+ FSP+S++ A
Sbjct: 27 PQGDAAQKTDTSHHD-QDHPTFNK-ITPNLAEFAFSLYRQLAHQSNSTNIFFSPVSIATA 84
Query: 320 LAFLSLGARGPTLIELLEGLKFNLTKTPEAEIHQGFQHLLRALSQPSNLLQLNVGNAMFV 499
A LSLG + T E+LEGL FNLT+ PEA+IH+GFQ LLR L+QP + LQL GN +F+
Sbjct: 85 FAMLSLGTKADTHDEILEGLNFNLTEIPEAQIHEGFQELLRTLNQPDSQLQLTTGNGLFL 144
Query: 500 DERLKLLDKFVQDAHELYFSEAFSISFKDSDAAIEFINNYVKNKTKGKIVDLFKQLSPDT 679
E LKL+DKF++D +LY SEAF+++F D++ A + IN+YV+ T+GKIVDL K+L DT
Sbjct: 145 SEGLKLVDKFLEDVKKLYHSEAFTVNFGDTEEAKKQINDYVEKGTQGKIVDLVKELDRDT 204
Query: 680 VLVLVNCIYFKAKWKMPFHPSFTTEADFHVSKNRTVRVPMM 802
V LVN I+FK KW+ PF T E DFHV + TV+VPMM
Sbjct: 205 VFALVNYIFFKGKWERPFEVKDTEEEDFHVDQVTTVKVPMM 245
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 40,133,262
Number of extensions: 1148595
Number of successful extensions: 6826
Number of sequences better than 1.0e-05: 59
Number of HSP's gapped: 6700
Number of HSP's successfully gapped: 68
Length of query: 333
Length of database: 18,297,164
Length adjustment: 103
Effective length of query: 230
Effective length of database: 14,901,872
Effective search space: 3427430560
Effective search space used: 3427430560
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-000822
(999 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_032484.1| serine protease inhibitor A3C precursor [Mus mu... 245 2e-71
Alignment gi|NP_001161766.1| serine protease inhibitor A3F [Mus musculus]. 243 6e-71
Alignment gi|NP_001028507.2| serine protease inhibitor A3F [Mus musculus]. 243 6e-71
Alignment gi|NP_001161767.1| serine protease inhibitor A3F [Mus musculus]. 243 6e-71
Alignment gi|NP_033278.2| serine protease inhibitor A3N precursor [Mus mu... 239 1e-69
Alignment gi|NP_001186869.1| serine (or cysteine) peptidase inhibitor, cl... 237 2e-68
Alignment gi|XP_003085882.1| PREDICTED: serine protease inhibitor A3F iso... 237 2e-68
Alignment gi|XP_003085883.1| PREDICTED: serine protease inhibitor A3F iso... 237 2e-68
Alignment gi|NP_033279.2| serine protease inhibitor A3M precursor [Mus mu... 238 5e-68
Alignment gi|NP_033277.1| serine protease inhibitor A3G [Mus musculus]. 231 4e-67
>ref|NP_032484.1| serine protease inhibitor A3C precursor [Mus musculus].
Length = 417
Score = 245 bits (626), Expect(2) = 2e-71
Identities = 125/252 (49%), Positives = 170/252 (67%)
Frame = +2
Query: 119 CSRVHCLPADDLASKTVTLKGQIKKLPAHNTAVVSSNTDFAFSLYKQLVSLDPSKNVIFS 298
C V C P L T+ K + + + S NTDFAFSLYK+L +P N++FS
Sbjct: 15 CPGVLCFPDGTLERDTLFHKDKENGTQLDSLTLASINTDFAFSLYKKLALKNPDTNIVFS 74
Query: 299 PLSVSIALAFLSLGARGPTLIELLEGLKFNLTKTPEAEIHQGFQHLLRALSQPSNLLQLN 478
PLS+S ALA +SLGA+G TL E+LEGL FNLT+TPEA+IHQGF HLL+ LS P +Q++
Sbjct: 75 PLSISAALAIVSLGAKGNTLEEILEGLNFNLTETPEADIHQGFGHLLQRLSHPGEQVQIS 134
Query: 479 VGNAMFVDERLKLLDKFVQDAHELYFSEAFSISFKDSDAAIEFINNYVKNKTKGKIVDLF 658
G+A+FV++ L++L +F + A LY +EAF+ F+ A + IN+YV N+T+ KI L
Sbjct: 135 TGSALFVEKHLQILAEFQEKARALYQAEAFTADFQQPLEATKLINDYVSNQTQRKIKGLI 194
Query: 659 KQLSPDTVLVLVNCIYFKAKWKMPFHPSFTTEADFHVSKNRTVRVPMMGITGRIVPYCMD 838
L DT++VLVN IYFK KWKMPF+P T E++F++ R+V+VPMM I PY D
Sbjct: 195 SDLDTDTLMVLVNYIYFKGKWKMPFNPRDTFESEFYLDVKRSVKVPMMKIKTLTTPYFRD 254
Query: 839 QELACSVVELPY 874
+EL+C+VVEL Y
Sbjct: 255 EELSCTVVELKY 266
Score = 43.1 bits (100), Expect(2) = 2e-71
Identities = 18/34 (52%), Positives = 26/34 (76%)
Frame = +1
Query: 892 LFILSDDGMMEDVGAKLLPDTLMRWRDSLQPRRI 993
LFIL D G M+ V A L P+TL +W++SL+PR++
Sbjct: 273 LFILPDQGRMQQVEASLQPETLRKWKNSLRPRKM 306
>ref|NP_001161766.1| serine protease inhibitor A3F [Mus musculus].
Length = 445
Score = 243 bits (621), Expect(2) = 6e-71
Identities = 122/245 (49%), Positives = 169/245 (68%)
Frame = +2
Query: 140 PADDLASKTVTLKGQIKKLPAHNTAVVSSNTDFAFSLYKQLVSLDPSKNVIFSPLSVSIA 319
P L T + Q + + SSNTDFAFSLYK+LV +P +NV+FSP S+ A
Sbjct: 12 PDVTLGRNTAVREVQENITSVDSLTLASSNTDFAFSLYKELVLKNPDENVVFSPFSICTA 71
Query: 320 LAFLSLGARGPTLIELLEGLKFNLTKTPEAEIHQGFQHLLRALSQPSNLLQLNVGNAMFV 499
LA LSLGA+ TL E+LEGLKFNLT+TPE +IHQGF++LL LSQP N +Q++ G+A+F+
Sbjct: 72 LALLSLGAKSNTLKEILEGLKFNLTETPEPDIHQGFRYLLDLLSQPGNQVQISTGSALFI 131
Query: 500 DERLKLLDKFVQDAHELYFSEAFSISFKDSDAAIEFINNYVKNKTKGKIVDLFKQLSPDT 679
++ L++L +F + A LY +EAF+ F+ A + IN+YV N T+GKI +L L T
Sbjct: 132 EKHLQILAEFKEKARALYQAEAFTADFQQPLEATKLINDYVSNHTQGKIKELISDLDKRT 191
Query: 680 VLVLVNCIYFKAKWKMPFHPSFTTEADFHVSKNRTVRVPMMGITGRIVPYCMDQELACSV 859
++VLVN IYFK KW+MPF P T +++F++ +NR+V+VPMM I PY D+EL+C+V
Sbjct: 192 LMVLVNYIYFKGKWEMPFDPDDTCKSEFYLDENRSVKVPMMKINNLTTPYFRDEELSCTV 251
Query: 860 VELPY 874
VEL Y
Sbjct: 252 VELKY 256
Score = 43.1 bits (100), Expect(2) = 6e-71
Identities = 19/34 (55%), Positives = 24/34 (70%)
Frame = +1
Query: 892 LFILSDDGMMEDVGAKLLPDTLMRWRDSLQPRRI 993
+FIL D G M+ V A L P+TL W+DSL+PR I
Sbjct: 263 MFILPDQGKMQQVEASLQPETLRNWKDSLKPRLI 296
>ref|NP_001028507.2| serine protease inhibitor A3F [Mus musculus].
Length = 445
Score = 243 bits (621), Expect(2) = 6e-71
Identities = 122/245 (49%), Positives = 169/245 (68%)
Frame = +2
Query: 140 PADDLASKTVTLKGQIKKLPAHNTAVVSSNTDFAFSLYKQLVSLDPSKNVIFSPLSVSIA 319
P L T + Q + + SSNTDFAFSLYK+LV +P +NV+FSP S+ A
Sbjct: 12 PDVTLGRNTAVREVQENITSVDSLTLASSNTDFAFSLYKELVLKNPDENVVFSPFSICTA 71
Query: 320 LAFLSLGARGPTLIELLEGLKFNLTKTPEAEIHQGFQHLLRALSQPSNLLQLNVGNAMFV 499
LA LSLGA+ TL E+LEGLKFNLT+TPE +IHQGF++LL LSQP N +Q++ G+A+F+
Sbjct: 72 LALLSLGAKSNTLKEILEGLKFNLTETPEPDIHQGFRYLLDLLSQPGNQVQISTGSALFI 131
Query: 500 DERLKLLDKFVQDAHELYFSEAFSISFKDSDAAIEFINNYVKNKTKGKIVDLFKQLSPDT 679
++ L++L +F + A LY +EAF+ F+ A + IN+YV N T+GKI +L L T
Sbjct: 132 EKHLQILAEFKEKARALYQAEAFTADFQQPLEATKLINDYVSNHTQGKIKELISDLDKRT 191
Query: 680 VLVLVNCIYFKAKWKMPFHPSFTTEADFHVSKNRTVRVPMMGITGRIVPYCMDQELACSV 859
++VLVN IYFK KW+MPF P T +++F++ +NR+V+VPMM I PY D+EL+C+V
Sbjct: 192 LMVLVNYIYFKGKWEMPFDPDDTCKSEFYLDENRSVKVPMMKINNLTTPYFRDEELSCTV 251
Query: 860 VELPY 874
VEL Y
Sbjct: 252 VELKY 256
Score = 43.1 bits (100), Expect(2) = 6e-71
Identities = 19/34 (55%), Positives = 24/34 (70%)
Frame = +1
Query: 892 LFILSDDGMMEDVGAKLLPDTLMRWRDSLQPRRI 993
+FIL D G M+ V A L P+TL W+DSL+PR I
Sbjct: 263 MFILPDQGKMQQVEASLQPETLRNWKDSLKPRLI 296
>ref|NP_001161767.1| serine protease inhibitor A3F [Mus musculus].
Length = 445
Score = 243 bits (621), Expect(2) = 6e-71
Identities = 122/245 (49%), Positives = 169/245 (68%)
Frame = +2
Query: 140 PADDLASKTVTLKGQIKKLPAHNTAVVSSNTDFAFSLYKQLVSLDPSKNVIFSPLSVSIA 319
P L T + Q + + SSNTDFAFSLYK+LV +P +NV+FSP S+ A
Sbjct: 12 PDVTLGRNTAVREVQENITSVDSLTLASSNTDFAFSLYKELVLKNPDENVVFSPFSICTA 71
Query: 320 LAFLSLGARGPTLIELLEGLKFNLTKTPEAEIHQGFQHLLRALSQPSNLLQLNVGNAMFV 499
LA LSLGA+ TL E+LEGLKFNLT+TPE +IHQGF++LL LSQP N +Q++ G+A+F+
Sbjct: 72 LALLSLGAKSNTLKEILEGLKFNLTETPEPDIHQGFRYLLDLLSQPGNQVQISTGSALFI 131
Query: 500 DERLKLLDKFVQDAHELYFSEAFSISFKDSDAAIEFINNYVKNKTKGKIVDLFKQLSPDT 679
++ L++L +F + A LY +EAF+ F+ A + IN+YV N T+GKI +L L T
Sbjct: 132 EKHLQILAEFKEKARALYQAEAFTADFQQPLEATKLINDYVSNHTQGKIKELISDLDKRT 191
Query: 680 VLVLVNCIYFKAKWKMPFHPSFTTEADFHVSKNRTVRVPMMGITGRIVPYCMDQELACSV 859
++VLVN IYFK KW+MPF P T +++F++ +NR+V+VPMM I PY D+EL+C+V
Sbjct: 192 LMVLVNYIYFKGKWEMPFDPDDTCKSEFYLDENRSVKVPMMKINNLTTPYFRDEELSCTV 251
Query: 860 VELPY 874
VEL Y
Sbjct: 252 VELKY 256
Score = 43.1 bits (100), Expect(2) = 6e-71
Identities = 19/34 (55%), Positives = 24/34 (70%)
Frame = +1
Query: 892 LFILSDDGMMEDVGAKLLPDTLMRWRDSLQPRRI 993
+FIL D G M+ V A L P+TL W+DSL+PR I
Sbjct: 263 MFILPDQGKMQQVEASLQPETLRNWKDSLKPRLI 296
>ref|NP_033278.2| serine protease inhibitor A3N precursor [Mus musculus].
Length = 418
Score = 239 bits (611), Expect(2) = 1e-69
Identities = 121/252 (48%), Positives = 168/252 (66%)
Frame = +2
Query: 119 CSRVHCLPADDLASKTVTLKGQIKKLPAHNTAVVSSNTDFAFSLYKQLVSLDPSKNVIFS 298
C V C P L + + + S NTDFAFSLYK+LV +P KN++FS
Sbjct: 15 CPAVLCFPDGTLGMDAAVQEDHDNGTQLDSLTLASINTDFAFSLYKELVLKNPDKNIVFS 74
Query: 299 PLSVSIALAFLSLGARGPTLIELLEGLKFNLTKTPEAEIHQGFQHLLRALSQPSNLLQLN 478
PLS+S ALA +SLGA+G TL E+LEGLKFNLT+T EA+IHQGF HLL+ L+QP + +Q++
Sbjct: 75 PLSISAALAVMSLGAKGNTLEEILEGLKFNLTETSEADIHQGFGHLLQRLNQPKDQVQIS 134
Query: 479 VGNAMFVDERLKLLDKFVQDAHELYFSEAFSISFKDSDAAIEFINNYVKNKTKGKIVDLF 658
G+A+F+++R ++L +F + A LY +EAF+ F+ A + IN+YV+ +T+G I +L
Sbjct: 135 TGSALFIEKRQQILTEFQEKARALYQAEAFTADFQQPRQAKKLINDYVRKQTQGMIKELV 194
Query: 659 KQLSPDTVLVLVNCIYFKAKWKMPFHPSFTTEADFHVSKNRTVRVPMMGITGRIVPYCMD 838
L T++VLVN IYFKAKWK+PF P T +++F+ K R V VPMM + PY D
Sbjct: 195 SDLDKRTLMVLVNYIYFKAKWKVPFDPLDTFKSEFYAGKRRPVIVPMMSMEDLTTPYFRD 254
Query: 839 QELACSVVELPY 874
+EL C+VVEL Y
Sbjct: 255 EELFCTVVELKY 266
Score = 42.4 bits (98), Expect(2) = 1e-69
Identities = 18/34 (52%), Positives = 25/34 (73%)
Frame = +1
Query: 892 LFILSDDGMMEDVGAKLLPDTLMRWRDSLQPRRI 993
+FIL D G M+ V A L P+TL +W++SL+PR I
Sbjct: 273 MFILPDQGKMQQVEASLQPETLRKWKNSLKPRMI 306
>ref|NP_001186869.1| serine (or cysteine) peptidase inhibitor, clade A, member 3I [Mus
musculus].
Length = 408
Score = 237 bits (604), Expect(2) = 2e-68
Identities = 119/220 (54%), Positives = 159/220 (72%)
Frame = +2
Query: 215 VVSSNTDFAFSLYKQLVSLDPSKNVIFSPLSVSIALAFLSLGARGPTLIELLEGLKFNLT 394
V SSNTDFAFSLY++LV +P +NV+FSP S+ ALA LSLGA+ TL E+LEGLKFNLT
Sbjct: 37 VASSNTDFAFSLYRKLVLKNPDENVVFSPFSIFTALALLSLGAKSNTLKEILEGLKFNLT 96
Query: 395 KTPEAEIHQGFQHLLRALSQPSNLLQLNVGNAMFVDERLKLLDKFVQDAHELYFSEAFSI 574
+TPE +IHQGF++LL LSQP + +Q++ G+A+FV++ L++L +F + A LY +EAF+
Sbjct: 97 ETPEPDIHQGFRYLLDLLSQPGDQVQISTGSALFVEKHLQILAEFKEKARALYQAEAFTA 156
Query: 575 SFKDSDAAIEFINNYVKNKTKGKIVDLFKQLSPDTVLVLVNCIYFKAKWKMPFHPSFTTE 754
F A + IN+YV N+T+GKI +L L T++VLVN IYFK KWKMPF P T
Sbjct: 157 DFLQPCQAKKLINDYVSNQTQGKIKELISDLDKSTLMVLVNYIYFKGKWKMPFDPRDTFN 216
Query: 755 ADFHVSKNRTVRVPMMGITGRIVPYCMDQELACSVVELPY 874
+ F++ + R+V+VPMM I PY D EL+CSVVEL Y
Sbjct: 217 SKFYLDEKRSVKVPMMKIEELTTPYFRDDELSCSVVELKY 256
Score = 41.6 bits (96), Expect(2) = 2e-68
Identities = 18/35 (51%), Positives = 25/35 (71%)
Frame = +1
Query: 892 LFILSDDGMMEDVGAKLLPDTLMRWRDSLQPRRIT 996
LFIL D G M+ V L P+TL +W++SL+P RI+
Sbjct: 263 LFILPDQGKMQQVETSLHPETLRKWKNSLKPSRIS 297
>ref|XP_003085882.1| PREDICTED: serine protease inhibitor A3F isoform 1 [Mus musculus].
Length = 408
Score = 237 bits (604), Expect(2) = 2e-68
Identities = 119/220 (54%), Positives = 159/220 (72%)
Frame = +2
Query: 215 VVSSNTDFAFSLYKQLVSLDPSKNVIFSPLSVSIALAFLSLGARGPTLIELLEGLKFNLT 394
V SSNTDFAFSLY++LV +P +NV+FSP S+ ALA LSLGA+ TL E+LEGLKFNLT
Sbjct: 37 VASSNTDFAFSLYRKLVLKNPDENVVFSPFSIFTALALLSLGAKSNTLKEILEGLKFNLT 96
Query: 395 KTPEAEIHQGFQHLLRALSQPSNLLQLNVGNAMFVDERLKLLDKFVQDAHELYFSEAFSI 574
+TPE +IHQGF++LL LSQP + +Q++ G+A+FV++ L++L +F + A LY +EAF+
Sbjct: 97 ETPEPDIHQGFRYLLDLLSQPGDQVQISTGSALFVEKHLQILAEFKEKARALYQAEAFTA 156
Query: 575 SFKDSDAAIEFINNYVKNKTKGKIVDLFKQLSPDTVLVLVNCIYFKAKWKMPFHPSFTTE 754
F A + IN+YV N+T+GKI +L L T++VLVN IYFK KWKMPF P T
Sbjct: 157 DFLQPCQAKKLINDYVSNQTQGKIKELISDLDKSTLMVLVNYIYFKGKWKMPFDPRDTFN 216
Query: 755 ADFHVSKNRTVRVPMMGITGRIVPYCMDQELACSVVELPY 874
+ F++ + R+V+VPMM I PY D EL+CSVVEL Y
Sbjct: 217 SKFYLDEKRSVKVPMMKIEELTTPYFRDDELSCSVVELKY 256
Score = 41.6 bits (96), Expect(2) = 2e-68
Identities = 18/35 (51%), Positives = 25/35 (71%)
Frame = +1
Query: 892 LFILSDDGMMEDVGAKLLPDTLMRWRDSLQPRRIT 996
LFIL D G M+ V L P+TL +W++SL+P RI+
Sbjct: 263 LFILPDQGKMQQVETSLHPETLRKWKNSLKPSRIS 297
>ref|XP_003085883.1| PREDICTED: serine protease inhibitor A3F isoform 2 [Mus musculus].
Length = 408
Score = 237 bits (604), Expect(2) = 2e-68
Identities = 119/220 (54%), Positives = 159/220 (72%)
Frame = +2
Query: 215 VVSSNTDFAFSLYKQLVSLDPSKNVIFSPLSVSIALAFLSLGARGPTLIELLEGLKFNLT 394
V SSNTDFAFSLY++LV +P +NV+FSP S+ ALA LSLGA+ TL E+LEGLKFNLT
Sbjct: 37 VASSNTDFAFSLYRKLVLKNPDENVVFSPFSIFTALALLSLGAKSNTLKEILEGLKFNLT 96
Query: 395 KTPEAEIHQGFQHLLRALSQPSNLLQLNVGNAMFVDERLKLLDKFVQDAHELYFSEAFSI 574
+TPE +IHQGF++LL LSQP + +Q++ G+A+FV++ L++L +F + A LY +EAF+
Sbjct: 97 ETPEPDIHQGFRYLLDLLSQPGDQVQISTGSALFVEKHLQILAEFKEKARALYQAEAFTA 156
Query: 575 SFKDSDAAIEFINNYVKNKTKGKIVDLFKQLSPDTVLVLVNCIYFKAKWKMPFHPSFTTE 754
F A + IN+YV N+T+GKI +L L T++VLVN IYFK KWKMPF P T
Sbjct: 157 DFLQPCQAKKLINDYVSNQTQGKIKELISDLDKSTLMVLVNYIYFKGKWKMPFDPRDTFN 216
Query: 755 ADFHVSKNRTVRVPMMGITGRIVPYCMDQELACSVVELPY 874
+ F++ + R+V+VPMM I PY D EL+CSVVEL Y
Sbjct: 217 SKFYLDEKRSVKVPMMKIEELTTPYFRDDELSCSVVELKY 256
Score = 41.6 bits (96), Expect(2) = 2e-68
Identities = 18/35 (51%), Positives = 25/35 (71%)
Frame = +1
Query: 892 LFILSDDGMMEDVGAKLLPDTLMRWRDSLQPRRIT 996
LFIL D G M+ V L P+TL +W++SL+P RI+
Sbjct: 263 LFILPDQGKMQQVETSLHPETLRKWKNSLKPSRIS 297
>ref|NP_033279.2| serine protease inhibitor A3M precursor [Mus musculus].
Length = 418
Score = 238 bits (608), Expect(2) = 5e-68
Identities = 121/252 (48%), Positives = 169/252 (67%)
Frame = +2
Query: 119 CSRVHCLPADDLASKTVTLKGQIKKLPAHNTAVVSSNTDFAFSLYKQLVSLDPSKNVIFS 298
C V C D + K Q P + + S NTDFAFSLYK++ +P KN++FS
Sbjct: 15 CPTVLCFSDDTWGIDILLHKNQESGTPDDSLTLASINTDFAFSLYKKMALKNPDKNIVFS 74
Query: 299 PLSVSIALAFLSLGARGPTLIELLEGLKFNLTKTPEAEIHQGFQHLLRALSQPSNLLQLN 478
PLS+S ALA +SLGA+G TL E+LEGLKFNLT+T EA+IHQGF HLL+ LSQP + Q+N
Sbjct: 75 PLSISAALALVSLGAKGNTLEEILEGLKFNLTETSEADIHQGFGHLLQRLSQPEDQDQIN 134
Query: 479 VGNAMFVDERLKLLDKFVQDAHELYFSEAFSISFKDSDAAIEFINNYVKNKTKGKIVDLF 658
+GNAMF+++ L++L +F + LY +EAF+ F+ A + IN+YV N+T+G I L
Sbjct: 135 IGNAMFIEKDLQILAEFHEKTRALYQTEAFTADFQQPTEATKLINDYVSNQTQGMIKKLI 194
Query: 659 KQLSPDTVLVLVNCIYFKAKWKMPFHPSFTTEADFHVSKNRTVRVPMMGITGRIVPYCMD 838
+L T++VLVN IYFK KWK+ F P T E++F++ + R+V+VPMM + + D
Sbjct: 195 SELDDRTLMVLVNYIYFKGKWKISFDPQDTFESEFYLDEKRSVKVPMMKMKFLTTRHFRD 254
Query: 839 QELACSVVELPY 874
+EL+CSV+EL Y
Sbjct: 255 EELSCSVLELKY 266
Score = 38.5 bits (88), Expect(2) = 5e-68
Identities = 18/34 (52%), Positives = 23/34 (67%)
Frame = +1
Query: 892 LFILSDDGMMEDVGAKLLPDTLMRWRDSLQPRRI 993
LFIL D G M+ V A L P+TL +W SL+ R+I
Sbjct: 273 LFILPDQGRMQQVEASLQPETLRKWWKSLKTRKI 306
>ref|NP_033277.1| serine protease inhibitor A3G [Mus musculus].
Length = 440
Score = 231 bits (590), Expect(2) = 4e-67
Identities = 119/245 (48%), Positives = 166/245 (67%)
Frame = +2
Query: 140 PADDLASKTVTLKGQIKKLPAHNTAVVSSNTDFAFSLYKQLVSLDPSKNVIFSPLSVSIA 319
P L T + Q + +VSSNTDFAFSLY++LV +P +NV+FSP S+ A
Sbjct: 12 PDVTLGRNTAVREVQENVTSVDSLTLVSSNTDFAFSLYRKLVLKNPDENVVFSPFSICTA 71
Query: 320 LAFLSLGARGPTLIELLEGLKFNLTKTPEAEIHQGFQHLLRALSQPSNLLQLNVGNAMFV 499
LA LSLGA+ TL E+LEGLKFNLT+TPE +IHQGF++LL LSQP N +Q++ G+A+F+
Sbjct: 72 LALLSLGAKSNTLKEILEGLKFNLTETPEPDIHQGFRYLLDLLSQPGNQVQISTGSALFI 131
Query: 500 DERLKLLDKFVQDAHELYFSEAFSISFKDSDAAIEFINNYVKNKTKGKIVDLFKQLSPDT 679
++ L++L +F + A LY +EAF+ F+ A + IN+YV N T+GKI +L L T
Sbjct: 132 EKHLQILAEFKEKARALYQAEAFTADFQQPLKATKLINDYVSNHTQGKIKELISGLKEST 191
Query: 680 VLVLVNCIYFKAKWKMPFHPSFTTEADFHVSKNRTVRVPMMGITGRIVPYCMDQELACSV 859
++VLVN IYFK KWK PF P+ T +++F++ + R+V V MM PY D+EL+C+V
Sbjct: 192 LMVLVNYIYFKGKWKNPFDPNDTFKSEFYLDEKRSVIVSMMKTGYLTTPYFRDEELSCTV 251
Query: 860 VELPY 874
VEL Y
Sbjct: 252 VELKY 256
Score = 42.4 bits (98), Expect(2) = 4e-67
Identities = 18/34 (52%), Positives = 25/34 (73%)
Frame = +1
Query: 892 LFILSDDGMMEDVGAKLLPDTLMRWRDSLQPRRI 993
+FIL D G M+ V A L P+TL +W++SL+PR I
Sbjct: 263 MFILPDQGRMQQVEASLQPETLRKWKNSLKPRMI 296
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 33,806,294
Number of extensions: 950309
Number of successful extensions: 5359
Number of sequences better than 1.0e-05: 79
Number of HSP's gapped: 5206
Number of HSP's successfully gapped: 101
Length of query: 333
Length of database: 15,617,559
Length adjustment: 102
Effective length of query: 231
Effective length of database: 12,553,887
Effective search space: 2899947897
Effective search space used: 2899947897
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-000822
(999 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_001928857.3| PREDICTED: serpin A3-8 [Sus scrofa]. 476 e-145
Alignment gi|XP_001928879.1| PREDICTED: serpin A3-6 [Sus scrofa]. 412 e-126
Alignment gi|NP_998952.1| alpha-1-antichymotrypsin 2 [Sus scrofa]. 397 e-120
Alignment gi|XP_001928637.3| PREDICTED: serpin A3-5 [Sus scrofa]. 382 e-118
Alignment gi|XP_003356842.1| PREDICTED: serpin A3-6 [Sus scrofa]. 311 4e-85
Alignment gi|XP_003356841.1| PREDICTED: serpin A3-8-like, partial [Sus sc... 266 1e-71
Alignment gi|NP_999560.1| alpha-1-antitrypsin precursor [Sus scrofa]. 217 7e-57
Alignment gi|NP_998977.1| corticosteroid-binding globulin precursor [Sus ... 197 4e-53
Alignment gi|XP_003356840.1| PREDICTED: LOW QUALITY PROTEIN: kallistatin-... 187 1e-51
Alignment gi|XP_003356835.1| PREDICTED: serpin A11 [Sus scrofa]. 190 3e-51
>ref|XP_001928857.3| PREDICTED: serpin A3-8 [Sus scrofa].
Length = 423
Score = 476 bits (1226), Expect(2) = e-145
Identities = 242/271 (89%), Positives = 249/271 (91%)
Frame = +2
Query: 62 MRAEGMSXXXXXXXXXXXXCSRVHCLPADDLASKTVTLKGQIKKLPAHNTAVVSSNTDFA 241
MRAEGMS CSRVHC+PADDLASKTVTLKGQI KLPAHNTAVVSSNTDFA
Sbjct: 1 MRAEGMSLFLALGLLVAGLCSRVHCVPADDLASKTVTLKGQITKLPAHNTAVVSSNTDFA 60
Query: 242 FSLYKQLVSLDPSKNVIFSPLSVSIALAFLSLGARGPTLIELLEGLKFNLTKTPEAEIHQ 421
FSLYKQLVSLDP+KNVIFSPLSVSIALAFLSLGARG TL ELLEGLKFNLTKTPEAEIHQ
Sbjct: 61 FSLYKQLVSLDPNKNVIFSPLSVSIALAFLSLGARGSTLTELLEGLKFNLTKTPEAEIHQ 120
Query: 422 GFQHLLRALSQPSNLLQLNVGNAMFVDERLKLLDKFVQDAHELYFSEAFSISFKDSDAAI 601
GFQHLLRALSQPSNLLQLNVGNAMFVDERLKLLDKFVQDA ELYFSE FSISFKDSDAA+
Sbjct: 121 GFQHLLRALSQPSNLLQLNVGNAMFVDERLKLLDKFVQDARELYFSEVFSISFKDSDAAV 180
Query: 602 EFINNYVKNKTKGKIVDLFKQLSPDTVLVLVNCIYFKAKWKMPFHPSFTTEADFHVSKNR 781
EFINNYVKNKTKGKIVDLFKQLSPDTVLVLVNCIYFKAKWK PF PSFTTEADFHVSKNR
Sbjct: 181 EFINNYVKNKTKGKIVDLFKQLSPDTVLVLVNCIYFKAKWKTPFDPSFTTEADFHVSKNR 240
Query: 782 TVRVPMMGITGRIVPYCMDQELACSVVELPY 874
TVRVPMMGI+GR +PY D+ELAC+VVELPY
Sbjct: 241 TVRVPMMGISGRTLPYFRDEELACTVVELPY 271
Score = 56.2 bits (134), Expect(2) = e-145
Identities = 28/44 (63%), Positives = 31/44 (70%)
Frame = +1
Query: 868 PVHRHDCTLFILSDDGMMEDVGAKLLPDTLMRWRDSLQPRRITA 999
P +D LFIL DDG M V A+LLP+TL RWRDSL RRITA
Sbjct: 270 PYTSNDSALFILPDDGRMAAVEAQLLPETLRRWRDSLHQRRITA 313
>ref|XP_001928879.1| PREDICTED: serpin A3-6 [Sus scrofa].
Length = 423
Score = 412 bits (1058), Expect(2) = e-126
Identities = 213/271 (78%), Positives = 230/271 (84%)
Frame = +2
Query: 62 MRAEGMSXXXXXXXXXXXXCSRVHCLPADDLASKTVTLKGQIKKLPAHNTAVVSSNTDFA 241
MRAEGMS CSRVHC+PADDLASK VTLKGQI KLPAHNTAVVSSNTDFA
Sbjct: 1 MRAEGMSLFLALGLLVAGLCSRVHCVPADDLASKIVTLKGQITKLPAHNTAVVSSNTDFA 60
Query: 242 FSLYKQLVSLDPSKNVIFSPLSVSIALAFLSLGARGPTLIELLEGLKFNLTKTPEAEIHQ 421
FSLYKQLVSLDPSKNVIFSPLSVSIALAFLSLGA+G TL ELLEGLKFNLTKTPEAEIHQ
Sbjct: 61 FSLYKQLVSLDPSKNVIFSPLSVSIALAFLSLGAQGSTLTELLEGLKFNLTKTPEAEIHQ 120
Query: 422 GFQHLLRALSQPSNLLQLNVGNAMFVDERLKLLDKFVQDAHELYFSEAFSISFKDSDAAI 601
GFQHLL+ALSQPSNLLQLNVGNAMFVDE LKLLDKFVQDA ELY SEAF +F+D +AA
Sbjct: 121 GFQHLLQALSQPSNLLQLNVGNAMFVDEHLKLLDKFVQDARELYHSEAFPTNFQDLEAAR 180
Query: 602 EFINNYVKNKTKGKIVDLFKQLSPDTVLVLVNCIYFKAKWKMPFHPSFTTEADFHVSKNR 781
IN+YVKNKT+GKIV+L K+L P TV VLVN IYFKA+W F P+ TTEADF+VSKN+
Sbjct: 181 RLINDYVKNKTEGKIVELIKKLFPRTVAVLVNYIYFKAQWMTHFDPNLTTEADFYVSKNK 240
Query: 782 TVRVPMMGITGRIVPYCMDQELACSVVELPY 874
TV+VPMMGI VPY D+ELAC+VVELPY
Sbjct: 241 TVKVPMMGIKNLTVPYFRDEELACTVVELPY 271
Score = 58.2 bits (139), Expect(2) = e-126
Identities = 29/44 (65%), Positives = 31/44 (70%)
Frame = +1
Query: 868 PVHRHDCTLFILSDDGMMEDVGAKLLPDTLMRWRDSLQPRRITA 999
P +D TLFIL DDG M V A LLP+ L RWRDSLQPRRI A
Sbjct: 270 PYTSNDSTLFILPDDGRMAAVEANLLPEMLRRWRDSLQPRRIDA 313
>ref|NP_998952.1| alpha-1-antichymotrypsin 2 [Sus scrofa].
Length = 415
Score = 397 bits (1020), Expect(2) = e-120
Identities = 200/252 (79%), Positives = 220/252 (87%)
Frame = +2
Query: 119 CSRVHCLPADDLASKTVTLKGQIKKLPAHNTAVVSSNTDFAFSLYKQLVSLDPSKNVIFS 298
CSRVHC+PADD ASK VTLK QIKKLPAHNTAVVSSNTDFAFSLYKQL +P +NVIFS
Sbjct: 15 CSRVHCVPADDPASKIVTLKDQIKKLPAHNTAVVSSNTDFAFSLYKQLALTNPHENVIFS 74
Query: 299 PLSVSIALAFLSLGARGPTLIELLEGLKFNLTKTPEAEIHQGFQHLLRALSQPSNLLQLN 478
PLSVS+ALAFLSLGARGPTL ELLEGLKFNLTKTPEAEIHQGFQHLL L + SNLLQL
Sbjct: 75 PLSVSMALAFLSLGARGPTLTELLEGLKFNLTKTPEAEIHQGFQHLLSTLDRSSNLLQLR 134
Query: 479 VGNAMFVDERLKLLDKFVQDAHELYFSEAFSISFKDSDAAIEFINNYVKNKTKGKIVDLF 658
+GNAMF+DE+L+LLDKFVQDAHELY SEAF +F+D +AA IN+YVKNKT+GKIVDLF
Sbjct: 135 LGNAMFIDEQLELLDKFVQDAHELYHSEAFPTNFQDLEAARRLINDYVKNKTEGKIVDLF 194
Query: 659 KQLSPDTVLVLVNCIYFKAKWKMPFHPSFTTEADFHVSKNRTVRVPMMGITGRIVPYCMD 838
K+L P T +VLVN IYFKAKWK PF+P+ TTEADFHVSKNRTVRVPMMGI VPY D
Sbjct: 195 KKLDPLTKVVLVNYIYFKAKWKTPFNPNLTTEADFHVSKNRTVRVPMMGIRALTVPYFRD 254
Query: 839 QELACSVVELPY 874
+ELAC+VVELPY
Sbjct: 255 EELACTVVELPY 266
Score = 53.9 bits (128), Expect(2) = e-120
Identities = 27/42 (64%), Positives = 29/42 (69%)
Frame = +1
Query: 868 PVHRHDCTLFILSDDGMMEDVGAKLLPDTLMRWRDSLQPRRI 993
P +D LFIL DDG M V AKLLP+TL RWRD LQPR I
Sbjct: 265 PYTSNDSALFILPDDGRMAAVEAKLLPETLRRWRDFLQPRWI 306
>ref|XP_001928637.3| PREDICTED: serpin A3-5 [Sus scrofa].
Length = 393
Score = 382 bits (981), Expect(2) = e-118
Identities = 203/291 (69%), Positives = 224/291 (76%)
Frame = +2
Query: 2 ALRAGSGSGSTQRIPLCEADMRAEGMSXXXXXXXXXXXXCSRVHCLPADDLASKTVTLKG 181
ALRAG GSGSTQRI LCEA ADD ASK VTLK
Sbjct: 40 ALRAGGGSGSTQRILLCEA----------------------------ADDPASKIVTLKD 71
Query: 182 QIKKLPAHNTAVVSSNTDFAFSLYKQLVSLDPSKNVIFSPLSVSIALAFLSLGARGPTLI 361
QI+KLPAHNTAVVSSNTDFAFSLYKQL +P +NVIFSPLSVS+ALAFLSLGARGPTL
Sbjct: 72 QIRKLPAHNTAVVSSNTDFAFSLYKQLALTNPHENVIFSPLSVSMALAFLSLGARGPTLT 131
Query: 362 ELLEGLKFNLTKTPEAEIHQGFQHLLRALSQPSNLLQLNVGNAMFVDERLKLLDKFVQDA 541
ELLEGLKFNLTKTPEAEIHQGFQHLL L + SNLLQL +GNAMF+DE+L+LLDKFVQDA
Sbjct: 132 ELLEGLKFNLTKTPEAEIHQGFQHLLSTLDRSSNLLQLRLGNAMFIDEQLELLDKFVQDA 191
Query: 542 HELYFSEAFSISFKDSDAAIEFINNYVKNKTKGKIVDLFKQLSPDTVLVLVNCIYFKAKW 721
HELY SEAF +F+D +AA IN+YVKNKT+GKIVDLFK+L P T +VLVN IYFKAKW
Sbjct: 192 HELYHSEAFPTNFQDLEAARRLINDYVKNKTEGKIVDLFKKLDPLTKVVLVNYIYFKAKW 251
Query: 722 KMPFHPSFTTEADFHVSKNRTVRVPMMGITGRIVPYCMDQELACSVVELPY 874
K PF P T E+ FHVSKNRTV+VPMM + G PY D+ELAC+VVELPY
Sbjct: 252 KTPFDPEHTIESTFHVSKNRTVKVPMMSLRGLETPYFRDEELACTVVELPY 302
Score = 60.5 bits (145), Expect(2) = e-118
Identities = 30/44 (68%), Positives = 32/44 (72%)
Frame = +1
Query: 868 PVHRHDCTLFILSDDGMMEDVGAKLLPDTLMRWRDSLQPRRITA 999
P +D LFIL DDG M V AKLLP+TL RWRDSLQPRRI A
Sbjct: 301 PYTSNDSALFILPDDGRMAAVEAKLLPETLRRWRDSLQPRRIDA 344
>ref|XP_003356842.1| PREDICTED: serpin A3-6 [Sus scrofa].
Length = 345
Score = 311 bits (797), Expect = 4e-85
Identities = 161/217 (74%), Positives = 180/217 (82%)
Frame = +2
Query: 62 MRAEGMSXXXXXXXXXXXXCSRVHCLPADDLASKTVTLKGQIKKLPAHNTAVVSSNTDFA 241
MRAEGMS CSRVHC+PADDLASK VTLK QIKKLP HNTAVVSSNTDFA
Sbjct: 1 MRAEGMSLFLALGLLVAGLCSRVHCVPADDLASKIVTLKDQIKKLPVHNTAVVSSNTDFA 60
Query: 242 FSLYKQLVSLDPSKNVIFSPLSVSIALAFLSLGARGPTLIELLEGLKFNLTKTPEAEIHQ 421
FSLYKQL + KN+IFSPLSVS+ALAFLSLGARGPTL ELLEGLKFN+T+TPEAEIHQ
Sbjct: 61 FSLYKQLSLTNRHKNIIFSPLSVSMALAFLSLGARGPTLTELLEGLKFNVTETPEAEIHQ 120
Query: 422 GFQHLLRALSQPSNLLQLNVGNAMFVDERLKLLDKFVQDAHELYFSEAFSISFKDSDAAI 601
GFQHLLR L++PSNLLQL +GNAMF+DE+L+LLDKFVQDA ELY SEAF +F+D +AA
Sbjct: 121 GFQHLLRTLNRPSNLLQLRLGNAMFIDEQLELLDKFVQDARELYHSEAFPTNFQDLEAAR 180
Query: 602 EFINNYVKNKTKGKIVDLFKQLSPDTVLVLVNCIYFK 712
IN+YVKNKT+GKIV+L K+L P T VLVN IYFK
Sbjct: 181 RLINDYVKNKTEGKIVELIKRLIPVTEAVLVNYIYFK 217
>ref|XP_003356841.1| PREDICTED: serpin A3-8-like, partial [Sus scrofa].
Length = 201
Score = 266 bits (681), Expect = 1e-71
Identities = 141/194 (72%), Positives = 156/194 (80%)
Frame = +2
Query: 128 VHCLPADDLASKTVTLKGQIKKLPAHNTAVVSSNTDFAFSLYKQLVSLDPSKNVIFSPLS 307
VHC+P + T Q + P A+V SNTDFAFSLYKQLVSLDPSKNVIFSPLS
Sbjct: 7 VHCVPEGKPDPENGTPNDQHSRTPVDPHAIVPSNTDFAFSLYKQLVSLDPSKNVIFSPLS 66
Query: 308 VSIALAFLSLGARGPTLIELLEGLKFNLTKTPEAEIHQGFQHLLRALSQPSNLLQLNVGN 487
VSIALAFLSLGARGPTL ELLEGLKFNLTKTPEAEIHQGFQHLL+ALSQPSNLLQLNVGN
Sbjct: 67 VSIALAFLSLGARGPTLTELLEGLKFNLTKTPEAEIHQGFQHLLQALSQPSNLLQLNVGN 126
Query: 488 AMFVDERLKLLDKFVQDAHELYFSEAFSISFKDSDAAIEFINNYVKNKTKGKIVDLFKQL 667
AMFVDE LKLLD+F QDA + S+ FS +FKD AA+ FIN+YVKNKTKGKI LF +
Sbjct: 127 AMFVDEHLKLLDEFRQDAQAKFASDVFSTNFKDPGAAVVFINDYVKNKTKGKIPKLFDEH 186
Query: 668 SPDTVLVLVNCIYF 709
+ +V+VLVN IYF
Sbjct: 187 ATFSVMVLVNYIYF 200
>ref|NP_999560.1| alpha-1-antitrypsin precursor [Sus scrofa].
Length = 421
Score = 217 bits (553), Expect = 7e-57
Identities = 105/194 (54%), Positives = 139/194 (71%)
Frame = +2
Query: 233 DFAFSLYKQLVSLDPSKNVIFSPLSVSIALAFLSLGARGPTLIELLEGLKFNLTKTPEAE 412
DFAFSLY+Q+ + N+ SP++++ A A LSLG +G T E+LEGL+FNLT+ EAE
Sbjct: 59 DFAFSLYRQVARQSNTSNIFLSPVTIARAFAMLSLGTKGATHAEILEGLQFNLTEKAEAE 118
Query: 413 IHQGFQHLLRALSQPSNLLQLNVGNAMFVDERLKLLDKFVQDAHELYFSEAFSISFKDSD 592
IH+GFQHLL L+QP N LQL GN +F+DE+ KL+ KF++D LY SEAFSI+F+D++
Sbjct: 119 IHEGFQHLLHTLNQPDNQLQLTTGNGLFIDEKAKLVPKFLEDVKNLYHSEAFSINFRDTE 178
Query: 593 AAIEFINNYVKNKTKGKIVDLFKQLSPDTVLVLVNCIYFKAKWKMPFHPSFTTEADFHVS 772
A + IN+YV+ ++GKIVDL +L DTV LVN I+FK KW+ PF TTE DFHV
Sbjct: 179 EAKKCINDYVEKGSQGKIVDLVDELDKDTVFALVNYIFFKGKWEKPFEVEQTTEEDFHVD 238
Query: 773 KNRTVRVPMMGITG 814
+ TV+VPMM G
Sbjct: 239 EETTVKVPMMNRLG 252
>ref|NP_998977.1| corticosteroid-binding globulin precursor [Sus scrofa].
Length = 406
Score = 197 bits (500), Expect(2) = 4e-53
Identities = 104/217 (47%), Positives = 139/217 (64%)
Frame = +2
Query: 224 SNTDFAFSLYKQLVSLDPSKNVIFSPLSVSIALAFLSLGARGPTLIELLEGLKFNLTKTP 403
+N DFAF+LYK LV+ P K+V SP+S+S ALA LSLGA G T +LL+GL FNLT+TP
Sbjct: 41 NNVDFAFALYKHLVASAPGKDVFLSPVSISTALAMLSLGASGYTREQLLQGLGFNLTETP 100
Query: 404 EAEIHQGFQHLLRALSQPSNLLQLNVGNAMFVDERLKLLDKFVQDAHELYFSEAFSISFK 583
EAEIHQ FQHL L + ++ +GNA+F+D L+LL+ F + Y EA + F+
Sbjct: 101 EAEIHQDFQHLHSLLKGSNITSEMTMGNALFLDRSLELLESFSTGSKHYYGLEALAADFQ 160
Query: 584 DSDAAIEFINNYVKNKTKGKIVDLFKQLSPDTVLVLVNCIYFKAKWKMPFHPSFTTEADF 763
D A IN Y+KNKT+GKIVDLF + +L+L+N I+FK W F P T E +F
Sbjct: 161 DWAGASRQINEYIKNKTQGKIVDLFLEQDSSAMLILINYIFFKGTWTHSFPPESTREENF 220
Query: 764 HVSKNRTVRVPMMGITGRIVPYCMDQELACSVVELPY 874
+V++ TV+VPMM R + Y D L C +V+L Y
Sbjct: 221 YVNETATVKVPMM-FQSRAMKYLNDSLLPCQLVQLEY 256
Score = 29.6 bits (65), Expect(2) = 4e-53
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +1
Query: 880 HDCTLFILSDDGMMEDVGAKLLPDTLMRWRDSLQPRRI 993
++ FIL G M+ V A L DT+ RW SL P ++
Sbjct: 259 NETAFFILPVKGEMDTVIAGLSRDTIQRWSKSLIPSQV 296
>ref|XP_003356840.1| PREDICTED: LOW QUALITY PROTEIN: kallistatin-like [Sus scrofa].
Length = 424
Score = 187 bits (476), Expect(2) = 1e-51
Identities = 97/216 (44%), Positives = 134/216 (62%)
Frame = +2
Query: 227 NTDFAFSLYKQLVSLDPSKNVIFSPLSVSIALAFLSLGARGPTLIELLEGLKFNLTKTPE 406
NT FA Y +VS P N+ FSPLS+S A A LSLGA + ++LEGL FNLT+ +
Sbjct: 53 NTVFALHFYHLMVSQTPGSNIFFSPLSISAAYAMLSLGAGSLSRTQILEGLGFNLTEVSQ 112
Query: 407 AEIHQGFQHLLRALSQPSNLLQLNVGNAMFVDERLKLLDKFVQDAHELYFSEAFSISFKD 586
+ HQGFQ+LL L P + L++++GNA+F+ + LL F+ D+ Y S+ +F
Sbjct: 113 PDTHQGFQNLLHTLHLPDDRLEIHMGNALFLSPEVLLLPXFLNDSERFYESKLLHANFXK 172
Query: 587 SDAAIEFINNYVKNKTKGKIVDLFKQLSPDTVLVLVNCIYFKAKWKMPFHPSFTTEADFH 766
+ INN+VK +T+GKIVDL LSPDT +VLVN IYFKA W+ PF+PS T DF+
Sbjct: 173 PAGTAQLINNHVKEETQGKIVDLVSGLSPDTTMVLVNYIYFKALWEKPFNPSMTIPQDFY 232
Query: 767 VSKNRTVRVPMMGITGRIVPYCMDQELACSVVELPY 874
V + TV+VPMM + Y D+ C+V+ + Y
Sbjct: 233 VDEVTTVKVPMMMQGPQHHWYLHDRHFPCTVLRMDY 268
Score = 34.3 bits (77), Expect(2) = 1e-51
Identities = 18/39 (46%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +1
Query: 874 HRHDCT-LFILSDDGMMEDVGAKLLPDTLMRWRDSLQPR 987
++ D T LFIL + G M++V L P+ L RWR+ LQ R
Sbjct: 268 YKGDATALFILPNXGKMDEVEEVLTPEMLTRWRNLLQNR 306
>ref|XP_003356835.1| PREDICTED: serpin A11 [Sus scrofa].
Length = 422
Score = 190 bits (482), Expect(2) = 3e-51
Identities = 100/227 (44%), Positives = 154/227 (67%), Gaps = 1/227 (0%)
Frame = +2
Query: 197 PAHNTAVVSSNTDFAFSLYKQLVSLDPSKNVIFSPLSVSIALAFLSLGARGPTLIELLEG 376
PA++ + + TDFA LYKQL + P N+ FSP+S+S LA LSLGA+ T ++LEG
Sbjct: 45 PAYHK-ITPTLTDFALRLYKQLAAETPG-NIFFSPVSISSTLALLSLGAQADTPTQILEG 102
Query: 377 LKFNLTKTPEAEIHQGFQHLLRALSQPSNLLQLNVGNAMFVDERLKLLDKFVQDAHELYF 556
L FNLT+ PEA+IH+GFQ L+R L PS+ L++ VGN++F+D++LK F+ + E+Y
Sbjct: 103 LGFNLTEIPEADIHRGFQSLIRTLGLPSSKLEMKVGNSLFLDKQLKPQQHFLDNIREVYG 162
Query: 557 SEAFSISFKDSDAAIEFINNYVKNKTKGKIVDLFKQLSPDTVLVLVNCIYFKAKWKMPFH 736
+ AFS +F DS IN+Y++ +T G++VD ++ + DT++VL+N I+FKAKWK PF+
Sbjct: 163 ALAFSANFTDSGTTRRQINDYLRKQTYGQVVDCLEEFAQDTLMVLLNYIFFKAKWKHPFN 222
Query: 737 PSFTTEAD-FHVSKNRTVRVPMMGITGRIVPYCMDQELACSVVELPY 874
P T + + F V + ++RVPMM + + D E+AC+V+++ Y
Sbjct: 223 PYQTQKQESFFVDERTSLRVPMMR-QKEMHRFLYDHEVACTVLQIEY 268
Score = 30.4 bits (67), Expect(2) = 3e-51
Identities = 15/31 (48%), Positives = 17/31 (54%)
Frame = +1
Query: 892 LFILSDDGMMEDVGAKLLPDTLMRWRDSLQP 984
L IL D G M V A L P+TL +W L P
Sbjct: 275 LLILPDPGKMAQVEAALQPETLRKWDQLLLP 305
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 25,393,498
Number of extensions: 739614
Number of successful extensions: 4554
Number of sequences better than 1.0e-05: 38
Number of HSP's gapped: 4489
Number of HSP's successfully gapped: 52
Length of query: 333
Length of database: 11,343,932
Length adjustment: 99
Effective length of query: 234
Effective length of database: 8,879,129
Effective search space: 2077716186
Effective search space used: 2077716186
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-000822
(999 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr07 1207 0.0
>Sscrofa_Chr07
|| Length = 134764511
Score = 1207 bits (609), Expect = 0.0
Identities = 645/657 (98%)
Strand = Plus / Plus
Query: 57 cagacatgagggcggagggaatgtccctcttcctggctctgggcctcctggtggctgggc 116
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 122963667 cagacatgagggcggagggcatgtccctcttcctggctctgggcctcctggtggctgggc 122963726
Query: 117 tctgctccagggtccactgcctcccagcagatgaccttgcctcaaagactgtgaccctga 176
|||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||
Sbjct: 122963727 tctgctccagggtccactgcgtcccagcggatgaccttgcctcaaagactgtgaccctga 122963786
Query: 177 agggccagatcaagaagctgccagcgcacaacaccgccgtcgtctccagcaacaccgact 236
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122963787 agggccagatcacgaagctgccagcgcacaacaccgccgtcgtctccagcaacaccgact 122963846
Query: 237 tcgccttcagcctctacaagcagctggtttctttagaccccagtaagaacgtcatcttct 296
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 122963847 tcgccttcagcctctacaagcagctggtttctttagaccccaataagaacgtcatcttct 122963906
Query: 297 ccccgctgagcgtctccatagccttggccttcctgtctctgggggcccgaggccccaccc 356
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 122963907 ccccgctgagcgtctccatagccttggccttcctgtctctgggggcccgaggctccaccc 122963966
Query: 357 tgatagagctcctggaaggcctcaagttcaacctcacaaagacccccgaggcagaaatcc 416
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122963967 tgacagagctcctggaaggcctcaagttcaacctcacaaagacccccgaggcagaaatcc 122964026
Query: 417 accagggcttccagcacctcctgcgggccctcagccaacccagcaacctgctgcagctga 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122964027 accagggcttccagcacctcctgcgggccctcagccaacccagcaacctgctgcagctga 122964086
Query: 477 acgtgggcaacgccatgttcgtggatgagcggctgaagctgctggacaagttcgtccaag 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122964087 acgtgggcaacgccatgttcgtggatgagcggctgaagctgctggacaagttcgtccaag 122964146
Query: 537 atgcccatgagctgtacttctccgaggccttctccatcagctttaaggactccgatgctg 596
|||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 122964147 atgcccgtgagctgtacttctccgaggtcttctccatcagctttaaggactccgatgctg 122964206
Query: 597 ccatagagttcatcaacaactatgtaaagaataagaccaaggggaaaattgtggatttgt 656
|| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 122964207 ccgtagagttcatcaacaactatgtgaagaataagaccaaggggaaaattgtggatttgt 122964266
Query: 657 tcaaacaactttccccagataccgtcctggttctggtgaactgcatctactttaaag 713
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 122964267 tcaaacaactttccccggataccgtcctggttctggtgaactgcatctactttaaag 122964323
Score = 1128 bits (569), Expect = 0.0
Identities = 635/657 (96%)
Strand = Plus / Plus
Query: 57 cagacatgagggcggagggaatgtccctcttcctggctctgggcctcctggtggctgggc 116
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 123036214 cagacatgagggcggagggaatgtccctcttcctggctctggggctcctggtggctgggc 123036273
Query: 117 tctgctccagggtccactgcctcccagcagatgaccttgcctcaaagactgtgaccctga 176
|||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||
Sbjct: 123036274 tctgctccagggtccactgcgtcccagcggatgaccttgcctcaaagactgtgaccctga 123036333
Query: 177 agggccagatcaagaagctgccagcgcacaacaccgccgtcgtctccagcaacaccgact 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123036334 agggccagatcaagaagctgccagcgcacaacaccgccgtcgtctccagcaacaccgact 123036393
Query: 237 tcgccttcagcctctacaagcagctggtttctttagaccccagtaagaacgtcatcttct 296
||||||||||||||||||||||||||| | || | ||| | || ||||||||||
Sbjct: 123036394 tcgccttcagcctctacaagcagctggctctggccgaacgcagagaaaatgtcatcttct 123036453
Query: 297 ccccgctgagcgtctccatagccttggccttcctgtctctgggggcccgaggccccaccc 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123036454 ccccgctgagcgtctccatagccttggccttcctgtctctgggggcccgaggccccaccc 123036513
Query: 357 tgatagagctcctggaaggcctcaagttcaacctcacaaagacccccgaggcagaaatcc 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123036514 tgatagagctcctggaaggcctcaagttcaacctcacaaagacccccgaggcagaaatcc 123036573
Query: 417 accagggcttccagcacctcctgcgggccctcagccaacccagcaacctgctgcagctga 476
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 123036574 accagggcttccagcacctcctgcaggccctcagccaacccagcaacctgctgcagctga 123036633
Query: 477 acgtgggcaacgccatgttcgtggatgagcggctgaagctgctggacaagttcgtccaag 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123036634 acgtgggcaacgccatgttcgtggatgagcggctgaagctgctggacaagttcgtccaag 123036693
Query: 537 atgcccatgagctgtacttctccgaggccttctccatcagctttaaggactccgatgctg 596
|||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 123036694 atgcccgtgagctgtacttctccgaggtcttctccatcagctttaaggactccgatgctg 123036753
Query: 597 ccatagagttcatcaacaactatgtaaagaataagaccaaggggaaaattgtggatttgt 656
|| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 123036754 ccgtagagttcatcaacaactatgtgaagaataagaccaaggggaaaattgtggatttgt 123036813
Query: 657 tcaaacaactttccccagataccgtcctggttctggtgaactgcatctactttaaag 713
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 123036814 tcaaacaactttccccggataccgtcctggttctggtgaactgcatctactttaaag 123036870
Score = 912 bits (460), Expect = 0.0
Identities = 499/512 (97%)
Strand = Plus / Minus
Query: 57 cagacatgagggcggagggaatgtccctcttcctggctctgggcctcctggtggctgggc 116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123101427 cagacatgagggcggagggaatgtccctcttcctggctctgggcctcctggtggctgggc 123101368
Query: 117 tctgctccagggtccactgcctcccagcagatgaccttgcctcaaagactgtgaccctga 176
|||||||||||||||||||| ||||||| ||||||||||||||||||| |||||||||||
Sbjct: 123101367 tctgctccagggtccactgcgtcccagcggatgaccttgcctcaaagattgtgaccctga 123101308
Query: 177 agggccagatcaagaagctgccagcgcacaacaccgccgtcgtctccagcaacaccgact 236
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123101307 agggccagatcacgaagctgccagcgcacaacaccgccgtcgtctccagcaacaccgact 123101248
Query: 237 tcgccttcagcctctacaagcagctggtttctttagaccccagtaagaacgtcatcttct 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123101247 tcgccttcagcctctacaagcagctggtttctttagaccccagtaagaacgtcatcttct 123101188
Query: 297 ccccgctgagcgtctccatagccttggccttcctgtctctgggggcccgaggccccaccc 356
|||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||
Sbjct: 123101187 ccccgctgagcgtctccatagccttggccttcctgtctctgggggcccaaggctccaccc 123101128
Query: 357 tgatagagctcctggaaggcctcaagttcaacctcacaaagacccccgaggcagaaatcc 416
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123101127 tgacagagctcctggaaggcctcaagttcaacctcacaaagacccccgaggcagaaatcc 123101068
Query: 417 accagggcttccagcacctcctgcgggccctcagccaacccagcaacctgctgcagctga 476
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 123101067 accagggcttccagcacctcctgcaggccctcagccaacccagcaacctgctgcagctga 123101008
Query: 477 acgtgggcaacgccatgttcgtggatgagcggctgaagctgctggacaagttcgtccaag 536
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 123101007 acgtgggcaacgccatgttcgtggatgagcatctgaagctgctggacaagttcgtccaag 123100948
Query: 537 atgcccatgagctgtacttctccgaggccttc 568
|||||| |||||||||| |||||||||||||
Sbjct: 123100947 atgcccgtgagctgtaccactccgaggccttc 123100916
Score = 654 bits (330), Expect = 0.0
Identities = 541/606 (89%), Gaps = 4/606 (0%)
Strand = Plus / Minus
Query: 57 cagacatgagggcggagggaatgtccctcttcctggctctgggcctcctggtggctgggc 116
|||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 123117426 cagacacgagggtagagggaatgtccctcttcctggctctgggcctcctggtggctggac 123117367
Query: 117 tctgctccagggtccactgcctcccagcagatgaccttgcctcaaagactgtgaccctga 176
|||||||||||||||||||| ||||||| ||||||| ||||||||||| |||||||||||
Sbjct: 123117366 tctgctccagggtccactgcgtcccagcggatgaccctgcctcaaagattgtgaccctga 123117307
Query: 177 agggccagatcaagaagctgccagcgcacaacaccgccgtcgtctccagcaacaccgact 236
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123117306 aggaccagatcaagaagctgccagcgcacaacaccgccgtcgtctccagcaacaccgact 123117247
Query: 237 tcgccttcagcctctacaagcagctggtttctttag-accccagtaagaacgtcatcttc 295
||||||||||||||||||||||||||| ||| | |||| | |||| |||||||||
Sbjct: 123117246 tcgccttcagcctctacaagcagctgg-ctctgacgaacccgcatgagaatgtcatcttc 123117188
Query: 296 tccccgctgagcgtctccatagccttggccttcctgtctctgggggcccgaggccccacc 355
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 123117187 tccccgctgagcgtctccatggccttggccttcctgtctctgggggcccgaggccccacc 123117128
Query: 356 ctgatagagctcctggaaggcctcaagttcaacctcacaaagacccccgaggcagaaatc 415
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123117127 ctgacagagctcctggaaggcctcaagttcaacctcacaaagacccccgaggcagaaatc 123117068
Query: 416 caccagggcttccagcacctcctgcgggccctcagccaacccagcaacctgctgcagctg 475
|||||||||||||||||||||||| | | ||| | | || |||||||||||||||
Sbjct: 123117067 caccagggcttccagcacctcctgagcacgctcgacaggtcgagtaacctgctgcagctg 123117008
Query: 476 aacgtgggcaacgccatgttcgtggatgagcggctgaagctgctggacaagttcgtccaa 535
| ||||||| ||||||||| | ||||||| |||| |||||||||||||||||||||||
Sbjct: 123117007 aggttgggcaatgccatgttcattgatgagcagctggagctgctggacaagttcgtccaa 123116948
Query: 536 gatgcccatgagctgtacttctccgaggccttctccatcagctttaaggactccgatgct 595
|||||||||||||||||| ||||||||||||| ||| | ||| |||| | || |||
Sbjct: 123116947 gatgcccatgagctgtaccactccgaggccttccccactaacttccaggatttagaagct 123116888
Query: 596 gcca-tagagttcatcaacaactatgtaaagaataagaccaaggggaaaattgtggattt 654
|||| ||| |||| || ||||||| |||||||||||| |||| ||||||||||| ||
Sbjct: 123116887 gccaggaga-ctcattaatgactatgtgaagaataagaccgagggaaaaattgtggactt 123116829
Query: 655 gttcaa 660
||||||
Sbjct: 123116828 gttcaa 123116823
Score = 640 bits (323), Expect = 0.0
Identities = 469/514 (91%), Gaps = 4/514 (0%)
Strand = Plus / Plus
Query: 57 cagacatgagggcggagggaatgtccctcttcctggctctgggcctcctggtggctgggc 116
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122933474 cagacatgagggcagagggaatgtccctcttcctggctctgggcctcctggtggctgggc 122933533
Query: 117 tctgctccagggtccactgcctcccagcagatgaccttgcctcaaagactgtgaccctga 176
|||||||||||||||||||| ||||||| ||||||||||||||||||| |||||||||||
Sbjct: 122933534 tctgctccagggtccactgcgtcccagcggatgaccttgcctcaaagattgtgaccctga 122933593
Query: 177 agggccagatcaagaagctgccagcgcacaacaccgccgtcgtctccagcaacaccgact 236
||| |||||||||||||||||||| ||||||||||||||| |||||||||||||||||||
Sbjct: 122933594 aggaccagatcaagaagctgccagtgcacaacaccgccgtggtctccagcaacaccgact 122933653
Query: 237 tcgccttcagcctctacaagcagctggtttctttagaccc--cagtaagaacgtcatctt 294
||||||||||||||||||||||||| || ||| || || || |||||| |||||||
Sbjct: 122933654 tcgccttcagcctctacaagcagct-gtctctgacgaaccgtca-taagaatatcatctt 122933711
Query: 295 ctccccgctgagcgtctccatagccttggccttcctgtctctgggggcccgaggccccac 354
||||||||||||||||||||| ||||||||||||||||| |||| ||||||||||||||
Sbjct: 122933712 ctccccgctgagcgtctccatggccttggccttcctgtccttgggagcccgaggccccac 122933771
Query: 355 cctgatagagctcctggaaggcctcaagttcaacctcacaaagacccccgaggcagaaat 414
||||| ||||||||||||||||||||||||||| ||||| ||||||| |||||||||||
Sbjct: 122933772 cctgacagagctcctggaaggcctcaagttcaatgtcacagagacccctgaggcagaaat 122933831
Query: 415 ccaccagggcttccagcacctcctgcgggccctcagccaacccagcaacctgctgcagct 474
||||||||||||||||||||||||| || | |||| | || |||||||||||||||||
Sbjct: 122933832 ccaccagggcttccagcacctcctgaggacgctcaacaggccgagcaacctgctgcagct 122933891
Query: 475 gaacgtgggcaacgccatgttcgtggatgagcggctgaagctgctggacaagttcgtcca 534
|| ||||||||||||||||| | ||||||| |||| ||||||||||||||||||||||
Sbjct: 122933892 gaggttgggcaacgccatgttcattgatgagcagctggagctgctggacaagttcgtcca 122933951
Query: 535 agatgcccatgagctgtacttctccgaggccttc 568
|||||||| |||||||||| |||||||||||||
Sbjct: 122933952 agatgcccgtgagctgtaccactccgaggccttc 122933985
Score = 571 bits (288), Expect = e-160
Identities = 303/308 (98%)
Strand = Plus / Minus
Query: 222 ccagcaacaccgacttcgccttcagcctctacaagcagctggtttctttagaccccagta 281
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123022910 ccagcaacaccgacttcgccttcagcctctacaagcagctggtttctttagaccccagta 123022851
Query: 282 agaacgtcatcttctccccgctgagcgtctccatagccttggccttcctgtctctggggg 341
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123022850 agaacgtcatcttctccccgctgagcgtctccatagccttggccttcctgtctctggggg 123022791
Query: 342 cccgaggccccaccctgatagagctcctggaaggcctcaagttcaacctcacaaagaccc 401
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 123022790 cccgaggccccaccctgacagagctcctggaaggcctcaagttcaacctcacaaagaccc 123022731
Query: 402 ccgaggcagaaatccaccagggcttccagcacctcctgcgggccctcagccaacccagca 461
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 123022730 ccgaggcagaaatccaccagggcttccagcacctcctgcaggccctcagccaacccagca 123022671
Query: 462 acctgctgcagctgaacgtgggcaacgccatgttcgtggatgagcggctgaagctgctgg 521
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 123022670 acctgctgcagctgaacgtgggcaacgccatgttcgtggatgagcatctgaagctgctgg 123022611
Query: 522 acaagttc 529
|| |||||
Sbjct: 123022610 acgagttc 123022603
Score = 555 bits (280), Expect = e-155
Identities = 301/308 (97%)
Strand = Plus / Plus
Query: 222 ccagcaacaccgacttcgccttcagcctctacaagcagctggtttctttagaccccagta 281
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122999543 ccagcaacaccgacttcgccttcagcctctacaagcagctggtttctttagaccccagta 122999602
Query: 282 agaacgtcatcttctccccgctgagcgtctccatagccttggccttcctgtctctggggg 341
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 122999603 agaacgtcatcttctccccgctgagcgtctccatggccttggccttcctgtctctggggg 122999662
Query: 342 cccgaggccccaccctgatagagctcctggaaggcctcaagttcaacctcacaaagaccc 401
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 122999663 cccgaggccccaccctgacagagctcctggaaggcctcaagttcaacctcacaaagaccc 122999722
Query: 402 ccgaggcagaaatccaccagggcttccagcacctcctgcgggccctcagccaacccagca 461
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 122999723 ccgaggcagaaatccaccagggcttccagcacctcctgcaggccctcagccaacccagca 122999782
Query: 462 acctgctgcagctgaacgtgggcaacgccatgttcgtggatgagcggctgaagctgctgg 521
||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||
Sbjct: 122999783 acctgctgcagctgaacgtgggcaacgccatgttcgtggatgaacatctgaagctgctgg 122999842
Query: 522 acaagttc 529
|| |||||
Sbjct: 122999843 acgagttc 122999850
Score = 301 bits (152), Expect = 4e-79
Identities = 246/276 (89%), Gaps = 1/276 (0%)
Strand = Plus / Minus
Query: 712 agccaagtggaagatgcccttccatcccagctttaccacggaggcagatttccacgtgag 771
|||||||||||||| ||||||| |||||| ||| ||||||||||||||||||||||||||
Sbjct: 123115289 agccaagtggaagacgcccttcaatcccaacttaaccacggaggcagatttccacgtgag 123115230
Query: 772 caagaacaggacggtgagggtgcccatgatgggcattacaggccgcatcgtgccttactg 831
|||||||||||||||||||||||||||||||||||||| | || | |||||||||||
Sbjct: 123115229 caagaacaggacggtgagggtgcccatgatgggcattagggccctgaccgtgccttactt 123115170
Query: 832 catggaccaggagctggcctgctctgtggtggagctcccgtaca-cagacacgactgcac 890
| |||| |||||||||||||| | ||||||||||||||||||| ||| ||||| || |
Sbjct: 123115169 ccgggacgaggagctggcctgcacggtggtggagctcccgtacaccagcaacgacagcgc 123115110
Query: 891 gctcttcatcctctctgacgacggcatgatggaggacgtaggagccaagctgctccctga 950
||||||||||||| |||||||||||| ||||| || ||| | ||||||||||||||||||
Sbjct: 123115109 gctcttcatcctccctgacgacggcaggatggcggccgtggaagccaagctgctccctga 123115050
Query: 951 tacactgatgaggtggagagactccctgcagcccag 986
||||||| |||||||||||||| ||||||||||||
Sbjct: 123115049 gacactgaggaggtggagagacttcctgcagcccag 123115014
Score = 289 bits (146), Expect = 1e-75
Identities = 240/270 (88%), Gaps = 1/270 (0%)
Strand = Plus / Plus
Query: 712 agccaagtggaagatgcccttccatcccagctttaccacggaggcagatttccacgtgag 771
|||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 122965989 agccaagtggaagacgccctttgatcccagctttaccacggaggcagatttccacgtgag 122966048
Query: 772 caagaacaggacggtgagggtgcccatgatgggcattacaggccgcatcgtgccttactg 831
||||||||||||||||||||||||||||||||||||| | ||||| | | |||||||||
Sbjct: 122966049 caagaacaggacggtgagggtgcccatgatgggcatttcgggccggaccctgccttactt 122966108
Query: 832 catggaccaggagctggcctgctctgtggtggagctcccgtaca-cagacacgactgcac 890
| |||| |||||||||||||| | ||||||||||||||||||| ||| ||||| || |
Sbjct: 122966109 ccgggacgaggagctggcctgcacggtggtggagctcccgtacaccagcaacgacagcgc 122966168
Query: 891 gctcttcatcctctctgacgacggcatgatggaggacgtaggagccaagctgctccctga 950
||||||||||||| |||||||||||| ||||| || ||| | |||| |||||||||| ||
Sbjct: 122966169 gctcttcatcctccctgacgacggcaggatggcggccgtggaagcccagctgctcccgga 122966228
Query: 951 tacactgatgaggtggagagactccctgca 980
|| |||| |||||||||||||||||||||
Sbjct: 122966229 gacgctgaggaggtggagagactccctgca 122966258
Score = 200 bits (101), Expect = 1e-48
Identities = 216/253 (85%), Gaps = 1/253 (0%)
Strand = Plus / Minus
Query: 735 atcccagctttaccacggaggcagatttccacgtgagcaagaacaggacggtgagggtgc 794
|||||| | |||| ||||||||||||||| ||||||||||||||| ||| |||| |||||
Sbjct: 123099144 atcccaaccttactacggaggcagatttctacgtgagcaagaacaagacagtgaaggtgc 123099085
Query: 795 ccatgatgggcattacaggccgcatcgtgccttactgcatggaccaggagctggcctgct 854
||||||||||||||| || | |||||| |||| | |||| ||||||||||||||
Sbjct: 123099084 ccatgatgggcattaagaacctgaccgtgccatacttccgggacgaggagctggcctgca 123099025
Query: 855 ctgtggtggagctcccgtacac-agacacgactgcacgctcttcatcctctctgacgacg 913
| |||||||||||||||||||| || ||||| ||||||||||||||||| |||||||||
Sbjct: 123099024 cggtggtggagctcccgtacaccagcaacgacagcacgctcttcatcctccctgacgacg 123098965
Query: 914 gcatgatggaggacgtaggagccaagctgctccctgatacactgatgaggtggagagact 973
||| ||||| || ||| | |||||| |||||||| || | |||| ||||||||||||||
Sbjct: 123098964 gcaggatggcggccgtggaagccaatctgctcccggagatgctgaggaggtggagagact 123098905
Query: 974 ccctgcagcccag 986
|||||||||||||
Sbjct: 123098904 ccctgcagcccag 123098892
Score = 188 bits (95), Expect = 4e-45
Identities = 182/203 (89%), Gaps = 6/203 (2%)
Strand = Plus / Plus
Query: 712 agccaagtggaagatgcccttccatcccagctttaccacggaggcagatttccacgtgag 771
|||||||||||||||||||||| |||||| |||||| |||| ||||||||||||||||||
Sbjct: 123038539 agccaagtggaagatgcccttc-atcccaactttac-acgggggcagatttccacgtgag 123038596
Query: 772 caagaacaggacggtgagggtgcccatgatgggcattacaggccgcatcgtgccttactg 831
||||||||| ||||||||| ||||||||||||||||||| ||||||| |||||||||||
Sbjct: 123038597 caagaacag-acggtgagg-tgcccatgatgggcattacgggccgcaccgtgccttactt 123038654
Query: 832 catggaccaggagctggcctgctctgtggtggagctcccgtaca-cagacacgactgcac 890
| ||| ||||||||||||||| | ||||||||||||||||||| ||| ||||| || |
Sbjct: 123038655 ccgggaacaggagctggcctgcacggtggtggagctcccgtacaccagcaacgacagcgc 123038714
Query: 891 gctcttcatcctctctgacgacg 913
|||| |||||||| |||||||||
Sbjct: 123038715 gctc-tcatcctccctgacgacg 123038736
Score = 157 bits (79), Expect = 1e-35
Identities = 191/227 (84%), Gaps = 1/227 (0%)
Strand = Plus / Minus
Query: 761 ttccacgtgagcaagaacaggacggtgagggtgcccatgatgggcattacaggccgcatc 820
||||||||||||||||||||||| |||| ||||||||||||| || || |||||
Sbjct: 123020815 ttccacgtgagcaagaacaggacagtgaaggtgcccatgatgagccttcgaggcctggaa 123020756
Query: 821 gtgccttactgcatggaccaggagctggcctgctctgtggtggagctcccgtacac-aga 879
||||||| | |||| |||||||||||||| | |||||||||||||||||||| ||
Sbjct: 123020755 acaccttacttccgggacgaggagctggcctgcacggtggtggagctcccgtacaccagc 123020696
Query: 880 cacgactgcacgctcttcatcctctctgacgacggcatgatggaggacgtaggagccaag 939
||||| || |||||||||||||| ||||||| |||| ||||| || ||| | |||||||
Sbjct: 123020695 aacgacagcgcgctcttcatcctccctgacgatggcaggatggcggccgtggaagccaag 123020636
Query: 940 ctgctccctgatacactgatgaggtggagagactccctgcagcccag 986
|||||||| || || |||| |||||||||||||||||||||||||||
Sbjct: 123020635 ctgctcccggagacgctgaggaggtggagagactccctgcagcccag 123020589
Score = 113 bits (57), Expect = 2e-22
Identities = 75/81 (92%)
Strand = Plus / Plus
Query: 61 catgagggcggagggaatgtccctcttcctggctctgggcctcctggtggctgggctctg 120
||||| ||| ||||| ||||||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 122999382 catgaaggcagagggcatgtcccccttcctggctctggggctcctggtggctgggctctg 122999441
Query: 121 ctccagggtccactgcctccc 141
|||||||||||||||| ||||
Sbjct: 122999442 ctccagggtccactgcgtccc 122999462
Score = 113 bits (57), Expect = 2e-22
Identities = 75/81 (92%)
Strand = Plus / Minus
Query: 61 catgagggcggagggaatgtccctcttcctggctctgggcctcctggtggctgggctctg 120
||||| ||| ||||| ||||||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 123023071 catgaaggcagagggcatgtcccccttcctggctctggggctcctggtggctgggctctg 123023012
Query: 121 ctccagggtccactgcctccc 141
|||||||||||||||| ||||
Sbjct: 123023011 ctccagggtccactgcgtccc 123022991
Score = 109 bits (55), Expect = 3e-21
Identities = 58/59 (98%)
Strand = Plus / Minus
Query: 1 agcattgcgggcaggcagcggctctgggtccactcagcgcatcccgctctgcgaggcag 59
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122953936 agcattgcgggcaggcggcggctctgggtccactcagcgcatcccgctctgcgaggcag 122953878
Score = 109 bits (55), Expect = 3e-21
Identities = 58/59 (98%)
Strand = Plus / Minus
Query: 1 agcattgcgggcaggcagcggctctgggtccactcagcgcatcccgctctgcgaggcag 59
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123103334 agcattgcgggcaggcggcggctctgggtccactcagcgcatcccgctctgcgaggcag 123103276
Score = 101 bits (51), Expect = 7e-19
Identities = 57/59 (96%)
Strand = Plus / Minus
Query: 1 agcattgcgggcaggcagcggctctgggtccactcagcgcatcccgctctgcgaggcag 59
|||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 123024977 agcattgcgggcaggcggcggctctgggtccactcagcacatcccgctctgcgaggcag 123024919
Score = 101 bits (51), Expect = 7e-19
Identities = 57/59 (96%)
Strand = Plus / Minus
Query: 1 agcattgcgggcaggcagcggctctgggtccactcagcgcatcccgctctgcgaggcag 59
|||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 123119625 agcattgcgggcaggcggcggctctgggtccactcagcgcatcctgctctgcgaggcag 123119567
Score = 93.7 bits (47), Expect = 2e-16
Identities = 56/59 (94%)
Strand = Plus / Plus
Query: 1 agcattgcgggcaggcagcggctctgggtccactcagcgcatcccgctctgcgaggcag 59
||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 122961778 agcattgcgggcaggtggtggctctgggtccactcagcgcatcccgctctgcgaggcag 122961836
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 26,969,992
Number of extensions: 265
Number of successful extensions: 265
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 257
Number of HSP's successfully gapped: 26
Length of query: 999
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 978
Effective length of database: 2,808,413,156
Effective search space: 2746628066568
Effective search space used: 2746628066568
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 29 (58.0 bits)