Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-000829
(1085 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001069022.1| carboxylesterase 1 [Bos taurus]. 573 e-164
Alignment gi|NP_001039483.1| carboxylesterase 1 [Bos taurus]. 562 e-160
Alignment gi|NP_001012287.1| retinyl ester hydrolase type 1 [Bos taurus]. 528 e-150
Alignment gi|NP_001029432.1| carboxylesterase 2 [Bos taurus]. 297 1e-80
Alignment gi|NP_001161306.1| carboxylesterase 4A [Bos taurus]. 294 1e-79
Alignment gi|NP_001179288.1| carboxylesterase 5A [Bos taurus]. 273 2e-73
Alignment gi|XP_002694929.1| PREDICTED: carboxylesterase 7 [Bos taurus]. 273 2e-73
Alignment gi|XP_002694855.1| PREDICTED: carboxylesterase 2-like [Bos taur... 268 5e-72
Alignment gi|XP_590749.3| PREDICTED: carboxylesterase 2-like [Bos taurus]. 268 5e-72
Alignment gi|NP_001178171.1| neuroligin-2 [Bos taurus]. 232 5e-61
>ref|NP_001069022.1| carboxylesterase 1 [Bos taurus].
Length = 558
Score = 573 bits (1478), Expect = e-164
Identities = 283/345 (82%), Positives = 306/345 (88%)
Frame = +3
Query: 39 MWLLPLVLTSLASSATWAGQPASPPVVDTAQGRVLGKYVSLEGLAQPVAVFLGVPFAKPP 218
MWLL LVLTSL S W P SPP+VDTAQGRVLGK+VSL+G AQPVAVFLGVPFAKPP
Sbjct: 1 MWLLALVLTSLGSFTAWGLAP-SPPIVDTAQGRVLGKHVSLKGFAQPVAVFLGVPFAKPP 59
Query: 219 LGSLRFAPPQPAEPWSFVKNTTSYPPMCCQEPIGGQMLSDLFTNRKERLIPEFSEDCLYL 398
LGSLRFAPPQPAEPW+FVKNT SYPPMC Q+P+G Q+LSDLFTNRKE + FSEDCLYL
Sbjct: 60 LGSLRFAPPQPAEPWTFVKNTISYPPMCSQDPVGAQLLSDLFTNRKENISLTFSEDCLYL 119
Query: 399 NIYTPADLTKRGRLPVMVWIHGGGLVVGGASTYDGLALAAHENVVVVAIQYRLGIWGFFS 578
NIYTPADLTKR RLPVMVWIHGGGL+VGGASTYDGL L+AHENVVVV IQYRLGIWGFFS
Sbjct: 120 NIYTPADLTKRSRLPVMVWIHGGGLMVGGASTYDGLVLSAHENVVVVTIQYRLGIWGFFS 179
Query: 579 TGDEHSRGNWGHLDQVAALHWVQENIANFGGDPGSVTIFGESAGGESVSVLVLSPLAKNL 758
TGDEHSRGNWGHLDQVAALHWVQENIANFGGDPGSVTIFGESAG ESVS+LVLSPLA+NL
Sbjct: 180 TGDEHSRGNWGHLDQVAALHWVQENIANFGGDPGSVTIFGESAGAESVSILVLSPLARNL 239
Query: 759 FHRAISESGVAFTAGLVRKDMKAAAKQIAVLAGW*NTTSAVFVHCLRQKSEDELLDLTLK 938
FHRAISESGVA + LV++D KAAA+QIAV+AG TTSAV VHCLRQK+EDELL++TLK
Sbjct: 240 FHRAISESGVALISTLVKRDSKAAAEQIAVIAGCKTTTSAVLVHCLRQKTEDELLEITLK 299
Query: 939 MKFFALDLHGDPRESHPFLTTVVDEVLLPQMPEGDLAEKDFTLSP 1073
MKFFALDLH D ESHPFL TVVD +LLP+MPE LAEK+F P
Sbjct: 300 MKFFALDLHKDSTESHPFLPTVVDGMLLPKMPEEMLAEKNFNNVP 344
>ref|NP_001039483.1| carboxylesterase 1 [Bos taurus].
Length = 566
Score = 562 bits (1449), Expect(2) = e-160
Identities = 275/345 (79%), Positives = 301/345 (87%)
Frame = +3
Query: 39 MWLLPLVLTSLASSATWAGQPASPPVVDTAQGRVLGKYVSLEGLAQPVAVFLGVPFAKPP 218
MWL LVLTS+++ WAGQP S PVVDTAQGRVLGK+VSL+G AQPVAVFLGVPFAKPP
Sbjct: 1 MWLFGLVLTSISTFTAWAGQPPSSPVVDTAQGRVLGKHVSLKGFAQPVAVFLGVPFAKPP 60
Query: 219 LGSLRFAPPQPAEPWSFVKNTTSYPPMCCQEPIGGQMLSDLFTNRKERLIPEFSEDCLYL 398
LGSLRFAPPQPAEPW+FVKNT S+PPMC Q+P+G Q+ SDLFTNRKE + FSEDCLYL
Sbjct: 61 LGSLRFAPPQPAEPWTFVKNTISHPPMCSQDPVGAQLFSDLFTNRKENISLTFSEDCLYL 120
Query: 399 NIYTPADLTKRGRLPVMVWIHGGGLVVGGASTYDGLALAAHENVVVVAIQYRLGIWGFFS 578
NIYTPADLTKR RLPVMVWIHGGGLVVGGASTYDGLAL+A ENVVVV IQYRLGIWGFFS
Sbjct: 121 NIYTPADLTKRSRLPVMVWIHGGGLVVGGASTYDGLALSARENVVVVTIQYRLGIWGFFS 180
Query: 579 TGDEHSRGNWGHLDQVAALHWVQENIANFGGDPGSVTIFGESAGGESVSVLVLSPLAKNL 758
TGDEHSRGNWGHLDQVAALHWVQENIANFGGDPGSVTIFGESAG ESVS+LVLSPLA+NL
Sbjct: 181 TGDEHSRGNWGHLDQVAALHWVQENIANFGGDPGSVTIFGESAGAESVSILVLSPLARNL 240
Query: 759 FHRAISESGVAFTAGLVRKDMKAAAKQIAVLAGW*NTTSAVFVHCLRQKSEDELLDLTLK 938
FHRAISESGVA T+ LV++D K AA+QIA AG TSAV VHCLR K+EDELL++T K
Sbjct: 241 FHRAISESGVALTSTLVKRDSKVAAEQIAAFAGCKTITSAVLVHCLRHKTEDELLEVTQK 300
Query: 939 MKFFALDLHGDPRESHPFLTTVVDEVLLPQMPEGDLAEKDFTLSP 1073
M FF L L+GDP E++PFL TVVD VLLP+MPE LAEK+F P
Sbjct: 301 MNFFTLVLYGDPTETYPFLPTVVDGVLLPKMPEEMLAEKNFNTVP 345
Score = 23.5 bits (49), Expect(2) = e-160
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +2
Query: 1052 KGFHTVPYIVG 1084
K F+TVPYIVG
Sbjct: 339 KNFNTVPYIVG 349
>ref|NP_001012287.1| retinyl ester hydrolase type 1 [Bos taurus].
Length = 565
Score = 528 bits (1361), Expect(2) = e-150
Identities = 265/345 (76%), Positives = 289/345 (83%)
Frame = +3
Query: 39 MWLLPLVLTSLASSATWAGQPASPPVVDTAQGRVLGKYVSLEGLAQPVAVFLGVPFAKPP 218
M L+ LVLTSLA S W G P SPP+VDTAQGRVLGKYVSL+G AQPV VFLG+PFAKPP
Sbjct: 1 MGLVALVLTSLAISTAW-GLPPSPPIVDTAQGRVLGKYVSLKGFAQPVGVFLGIPFAKPP 59
Query: 219 LGSLRFAPPQPAEPWSFVKNTTSYPPMCCQEPIGGQMLSDLFTNRKERLIPEFSEDCLYL 398
LGSLRFAPPQPAEPW+FVKNTTSY PMC Q + +M SDL +N E + +FSEDCLYL
Sbjct: 60 LGSLRFAPPQPAEPWTFVKNTTSYSPMCSQNAVLVEMTSDLISNGMETVKTKFSEDCLYL 119
Query: 399 NIYTPADLTKRGRLPVMVWIHGGGLVVGGASTYDGLALAAHENVVVVAIQYRLGIWGFFS 578
NIYTPADLTKR RLPVMVWIHGG L+ GGAS+ DGL L+AHENVVVV IQYRLGIWGFFS
Sbjct: 120 NIYTPADLTKRSRLPVMVWIHGGALLTGGASSCDGLVLSAHENVVVVTIQYRLGIWGFFS 179
Query: 579 TGDEHSRGNWGHLDQVAALHWVQENIANFGGDPGSVTIFGESAGGESVSVLVLSPLAKNL 758
TGDEHSRGNWGHLDQVAALHWVQENIANFGGDPGSVTIFG SAG ESVSVLVLSPLAKNL
Sbjct: 180 TGDEHSRGNWGHLDQVAALHWVQENIANFGGDPGSVTIFGGSAGAESVSVLVLSPLAKNL 239
Query: 759 FHRAISESGVAFTAGLVRKDMKAAAKQIAVLAGW*NTTSAVFVHCLRQKSEDELLDLTLK 938
FHRAISESGVA GLV+KD KA AK+IA AG TSAV VHCLRQK+EDELL++T K
Sbjct: 240 FHRAISESGVALIPGLVKKDSKAEAKRIAAFAGCKTITSAVLVHCLRQKTEDELLEITQK 299
Query: 939 MKFFALDLHGDPRESHPFLTTVVDEVLLPQMPEGDLAEKDFTLSP 1073
M FF L+ GDP +++PFL TVVD VLLP+MPE LAEK+F P
Sbjct: 300 MNFFTLNFLGDPTKTYPFLPTVVDGVLLPKMPEEMLAEKNFNTVP 344
Score = 23.5 bits (49), Expect(2) = e-150
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +2
Query: 1052 KGFHTVPYIVG 1084
K F+TVPYIVG
Sbjct: 338 KNFNTVPYIVG 348
>ref|NP_001029432.1| carboxylesterase 2 [Bos taurus].
Length = 553
Score = 297 bits (760), Expect = 1e-80
Identities = 167/328 (50%), Positives = 203/328 (61%)
Frame = +3
Query: 93 GQPASPPVVDTAQGRVLGKYVSLEGLAQPVAVFLGVPFAKPPLGSLRFAPPQPAEPWSFV 272
GQ ++ PV T G+V G V + V FLG+PFAKPP+G LRFAPP+P E WS V
Sbjct: 26 GQDSTRPVRTTHTGKVQGSLVYVNNADVGVHTFLGIPFAKPPVGPLRFAPPEPPESWSGV 85
Query: 273 KNTTSYPPMCCQEPIGGQMLSDLFTNRKERLIPEFSEDCLYLNIYTPADLTKRGRLPVMV 452
K+ TS P C Q+ G + + SEDCLYLNI+TPA + LPVMV
Sbjct: 86 KDGTSQPAKCPQDADGMKSMELWNVTLPST---SMSEDCLYLNIHTPAYSHEGSNLPVMV 142
Query: 453 WIHGGGLVVGGASTYDGLALAAHENVVVVAIQYRLGIWGFFSTGDEHSRGNWGHLDQVAA 632
WIHGGGLV+G AS YDG ALAA +VVVV IQYRLG+ GFFSTGD+H+ GNWG+LDQVAA
Sbjct: 143 WIHGGGLVLGMASMYDGSALAAFGDVVVVVIQYRLGLLGFFSTGDKHATGNWGYLDQVAA 202
Query: 633 LHWVQENIANFGGDPGSVTIFGESAGGESVSVLVLSPLAKNLFHRAISESGVAFTAGLVR 812
L WVQ+NIA FGGDPG VTIFGESAGG SVS+ V+SP+++ LFH AI ESGVA GL
Sbjct: 203 LRWVQQNIAYFGGDPGRVTIFGESAGGISVSLHVISPMSQGLFHGAIMESGVALLPGLTI 262
Query: 813 KDMKAAAKQIAVLAGW*NTTSAVFVHCLRQKSEDELLDLTLKMKFFALDLHGDPRESHPF 992
AK +A L+ S V CLR K+E+E+L + +K
Sbjct: 263 NSSDKVAKVVANLSACGQVDSEALVDCLRHKNEEEVLAINKLVK---------------I 307
Query: 993 LTTVVDEVLLPQMPEGDLAEKDFTLSPT 1076
+ VVD + LP+ P LA DF P+
Sbjct: 308 IPGVVDGIFLPKHPLELLASDDFQPVPS 335
>ref|NP_001161306.1| carboxylesterase 4A [Bos taurus].
Length = 550
Score = 294 bits (752), Expect = 1e-79
Identities = 161/354 (45%), Positives = 213/354 (60%), Gaps = 6/354 (1%)
Frame = +3
Query: 42 WLLPLVLTSLASSAT-WAGQPASPPVVDTAQGRVLGKYVSLEGLAQPVAVFLGVPFAKPP 218
W+L L LT L T W P+ DT G + GK + + P+ VFLGVPF+KPP
Sbjct: 3 WILCLSLTLLLVVQTAWGALHTKEPLADTKYGTLRGKQIHVG--KTPINVFLGVPFSKPP 60
Query: 219 LGSLRFAPPQPAEPWSFVKNTTSYPPMCCQEPIGGQMLSDLFTNRKERLIPEFSEDCLYL 398
+G+ RFA P+P EPW +++ T+Y P+C QE GQ+ S F K FSEDCLYL
Sbjct: 61 VGAHRFAAPEPPEPWEGIRDATTYAPVCLQES-WGQVTSMYFNTHKRYKWLHFSEDCLYL 119
Query: 399 NIYTPADLTKRGRLPVMVWIHGGGLVVGGASTYDGLALAAHENVVVVAIQYRLGIWGFFS 578
N++ P PVM+W GG +VG ASTYDG LAA E VVVV +Q+RLGI GF S
Sbjct: 120 NVHAPVRARGDPLQPVMIWFPGGAFLVGSASTYDGSELAAREKVVVVVLQHRLGILGFLS 179
Query: 579 TGDEHSRGNWGHLDQVAALHWVQENIANFGGDPGSVTIFGESAGGESVSVLVLSPLAKNL 758
TGD +RGNW LDQ+AAL WVQ+NI FGGDPG VT+FG+S+G +S L+ S LA+ L
Sbjct: 180 TGDSQARGNWALLDQIAALRWVQKNIEAFGGDPGCVTLFGQSSGAMCISGLMTSSLARGL 239
Query: 759 FHRAISESGVAFTAGLVRKDMKAAAKQIAVLAGW*NTTSAVFVHCLRQKSEDELLDLTLK 938
FHRAIS+SG A + D AK+IA LAG + ++ + V CLR S E++ ++ K
Sbjct: 240 FHRAISQSGTAVFQNFITPDPLKVAKKIAQLAGCNHNSTKILVDCLRTLSGAEVMRVSQK 299
Query: 939 MKFFALDLHGDPRESHPFLTTVVDEVLLPQMP-----EGDLAEKDFTLSPTSWE 1085
M+FF L DP++ F++ VVD V+ P +G +A + L + E
Sbjct: 300 MRFFKLHSQEDPQKVVWFMSPVVDGVVFQDNPIVLLTQGQVAPVPYLLGVNNLE 353
>ref|NP_001179288.1| carboxylesterase 5A [Bos taurus].
Length = 576
Score = 273 bits (698), Expect = 2e-73
Identities = 165/340 (48%), Positives = 198/340 (58%), Gaps = 6/340 (1%)
Frame = +3
Query: 75 SSATWAGQPASPPVVDTAQGRVLGKYVSLEGLAQPVAVFLGVPFAKPPLGSLRFAPPQPA 254
++AT A P T G V G S+ G V VFLGVP+A PP+G LRFA P+P
Sbjct: 20 AAATKGPATADAPARHTNLGWVQGTQASVLGNDMLVNVFLGVPYAAPPVGPLRFAKPEPL 79
Query: 255 EPWSFVKNTTSYPPMCCQEPIGGQMLSDLFTNRKERLI--PEF--SEDCLYLNIYTPADL 422
PW N TSYP +C Q LFT++ + P+F SEDCLYLNIY PA
Sbjct: 80 LPWDGFLNATSYPKLCFQNS------EWLFTDQHILKVHYPKFRVSEDCLYLNIYAPAHA 133
Query: 423 TKRGRLPVMVWIHGGGLVVGGASTYDGLALAAHENVVVVAIQYRLGIWGFFSTGDEHSRG 602
+LPVMVW+ GG G AS +DG ALA++E+V+VV IQYRLGI+GFF+TGDEH+RG
Sbjct: 134 ETGSKLPVMVWLPGGAFETGSASIFDGSALASYEDVLVVTIQYRLGIFGFFNTGDEHARG 193
Query: 603 NWGHLDQVAALHWVQENIANFGGDPGSVTIFGESAGGESVSVLVLSPLAKNLFHRAISES 782
NW +DQVAAL WVQENI FGGDP VTIFGESAG SVS L+LSP+ K LFHRAI ES
Sbjct: 194 NWAFMDQVAALIWVQENIEFFGGDPRCVTIFGESAGAISVSSLILSPMTKGLFHRAIMES 253
Query: 783 GVAFTAGLVRKDMKA--AAKQIAVLAGW*NTTSAVFVHCLRQKSEDELLDLTLKMKFFAL 956
GVA L D + + IA + + S + CLR KS ELL + K K F
Sbjct: 254 GVAIIPYLKAPDYERNDDLQTIASICDCSASDSIALLQCLRAKSSKELLSINQKTKSF-- 311
Query: 957 DLHGDPRESHPFLTTVVDEVLLPQMPEGDLAEKDFTLSPT 1076
T VVD + P P LA+K F L P+
Sbjct: 312 -------------TRVVDGLFFPNEPLDLLAQKLFHLVPS 338
>ref|XP_002694929.1| PREDICTED: carboxylesterase 7 [Bos taurus].
Length = 576
Score = 273 bits (698), Expect = 2e-73
Identities = 165/340 (48%), Positives = 198/340 (58%), Gaps = 6/340 (1%)
Frame = +3
Query: 75 SSATWAGQPASPPVVDTAQGRVLGKYVSLEGLAQPVAVFLGVPFAKPPLGSLRFAPPQPA 254
++AT A P T G V G S+ G V VFLGVP+A PP+G LRFA P+P
Sbjct: 20 AAATKGPATADAPARHTNLGWVQGTQASVLGNDMLVNVFLGVPYAAPPVGPLRFAKPEPL 79
Query: 255 EPWSFVKNTTSYPPMCCQEPIGGQMLSDLFTNRKERLI--PEF--SEDCLYLNIYTPADL 422
PW N TSYP +C Q LFT++ + P+F SEDCLYLNIY PA
Sbjct: 80 LPWDGFLNATSYPKLCFQNS------EWLFTDQHILKVHYPKFRVSEDCLYLNIYAPAHA 133
Query: 423 TKRGRLPVMVWIHGGGLVVGGASTYDGLALAAHENVVVVAIQYRLGIWGFFSTGDEHSRG 602
+LPVMVW+ GG G AS +DG ALA++E+V+VV IQYRLGI+GFF+TGDEH+RG
Sbjct: 134 ETGSKLPVMVWLPGGAFETGSASIFDGSALASYEDVLVVTIQYRLGIFGFFNTGDEHARG 193
Query: 603 NWGHLDQVAALHWVQENIANFGGDPGSVTIFGESAGGESVSVLVLSPLAKNLFHRAISES 782
NW +DQVAAL WVQENI FGGDP VTIFGESAG SVS L+LSP+ K LFHRAI ES
Sbjct: 194 NWAFMDQVAALIWVQENIEFFGGDPRCVTIFGESAGAISVSSLILSPMTKGLFHRAIMES 253
Query: 783 GVAFTAGLVRKDMKA--AAKQIAVLAGW*NTTSAVFVHCLRQKSEDELLDLTLKMKFFAL 956
GVA L D + + IA + + S + CLR KS ELL + K K F
Sbjct: 254 GVAIIPYLKAPDYERNDDLQTIASICDCSASDSIALLQCLRAKSSKELLSINQKTKSF-- 311
Query: 957 DLHGDPRESHPFLTTVVDEVLLPQMPEGDLAEKDFTLSPT 1076
T VVD + P P LA+K F L P+
Sbjct: 312 -------------TRVVDGLFFPNEPLDLLAQKLFHLVPS 338
>ref|XP_002694855.1| PREDICTED: carboxylesterase 2-like [Bos taurus].
Length = 570
Score = 268 bits (686), Expect = 5e-72
Identities = 159/336 (47%), Positives = 203/336 (60%), Gaps = 1/336 (0%)
Frame = +3
Query: 69 LASSATWAGQPASPPVVDTAQGRVLGKYVSLEGLAQPVAVFLGVPFAKPPLGSLRFAPPQ 248
LA SAT G + P VDT GRV G+ V ++G V VFLG+PFA+PPLG RF+ P+
Sbjct: 20 LAFSATDTGPGVTQPEVDTPLGRVRGRQVGVKGTDHLVNVFLGIPFAQPPLGPHRFSAPR 79
Query: 249 PAEPWSFVKNTTSYPPMCCQEPIGGQMLSDLFT-NRKERLIPEFSEDCLYLNIYTPADLT 425
PAE W V++ + +C Q+P +M + FT + K + P SEDCL LNIY+PA+
Sbjct: 80 PAESWEGVRDASRAHAVCPQDP--ERMNNSRFTLDGKHQTFP-ISEDCLILNIYSPAEAP 136
Query: 426 KRGRLPVMVWIHGGGLVVGGASTYDGLALAAHENVVVVAIQYRLGIWGFFSTGDEHSRGN 605
PVMVW HGG LV G A+++DG ALAA+ +VVVV +QYRLG GFFSTGD+H+ GN
Sbjct: 137 SGAGRPVMVWFHGGSLVTGTATSHDGSALAAYGDVVVVTVQYRLGFLGFFSTGDKHAPGN 196
Query: 606 WGHLDQVAALHWVQENIANFGGDPGSVTIFGESAGGESVSVLVLSPLAKNLFHRAISESG 785
WG LD VAAL WVQ NI FGGD SVTIFGES+G VS LVLSPLA LFHRAI++SG
Sbjct: 197 WGFLDVVAALRWVQGNITPFGGDFNSVTIFGESSGASVVSALVLSPLAAGLFHRAIAQSG 256
Query: 786 VAFTAGLVRKDMKAAAKQIAVLAGW*NTTSAVFVHCLRQKSEDELLDLTLKMKFFALDLH 965
+ GL+ + A+ +A + +SA V CLRQK+ E++ L K K A
Sbjct: 257 IITVPGLLDPNPWLLAQTLADSLACNSDSSAEMVQCLRQKTIKEMI-LAYKSKKIA---- 311
Query: 966 GDPRESHPFLTTVVDEVLLPQMPEGDLAEKDFTLSP 1073
+ +D P+ E L E+ F P
Sbjct: 312 ----------SYNIDGTFFPKSAEELLRERQFPSVP 337
>ref|XP_590749.3| PREDICTED: carboxylesterase 2-like [Bos taurus].
Length = 570
Score = 268 bits (686), Expect = 5e-72
Identities = 159/336 (47%), Positives = 203/336 (60%), Gaps = 1/336 (0%)
Frame = +3
Query: 69 LASSATWAGQPASPPVVDTAQGRVLGKYVSLEGLAQPVAVFLGVPFAKPPLGSLRFAPPQ 248
LA SAT G + P VDT GRV G+ V ++G V VFLG+PFA+PPLG RF+ P+
Sbjct: 20 LAFSATDTGPGVTQPEVDTPLGRVRGRQVGVKGTDHLVNVFLGIPFAQPPLGPHRFSAPR 79
Query: 249 PAEPWSFVKNTTSYPPMCCQEPIGGQMLSDLFT-NRKERLIPEFSEDCLYLNIYTPADLT 425
PAE W V++ + +C Q+P +M + FT + K + P SEDCL LNIY+PA+
Sbjct: 80 PAESWEGVRDASRAHAVCPQDP--ERMNNSRFTLDGKHQTFP-ISEDCLILNIYSPAEAP 136
Query: 426 KRGRLPVMVWIHGGGLVVGGASTYDGLALAAHENVVVVAIQYRLGIWGFFSTGDEHSRGN 605
PVMVW HGG LV G A+++DG ALAA+ +VVVV +QYRLG GFFSTGD+H+ GN
Sbjct: 137 SGAGRPVMVWFHGGSLVTGTATSHDGSALAAYGDVVVVTVQYRLGFLGFFSTGDKHAPGN 196
Query: 606 WGHLDQVAALHWVQENIANFGGDPGSVTIFGESAGGESVSVLVLSPLAKNLFHRAISESG 785
WG LD VAAL WVQ NI FGGD SVTIFGES+G VS LVLSPLA LFHRAI++SG
Sbjct: 197 WGFLDVVAALRWVQGNITPFGGDFNSVTIFGESSGASVVSALVLSPLAAGLFHRAIAQSG 256
Query: 786 VAFTAGLVRKDMKAAAKQIAVLAGW*NTTSAVFVHCLRQKSEDELLDLTLKMKFFALDLH 965
+ GL+ + A+ +A + +SA V CLRQK+ E++ L K K A
Sbjct: 257 IITVPGLLDPNPWLLAQTLADSLACNSDSSAEMVQCLRQKTIKEMI-LAYKSKKIA---- 311
Query: 966 GDPRESHPFLTTVVDEVLLPQMPEGDLAEKDFTLSP 1073
+ +D P+ E L E+ F P
Sbjct: 312 ----------SYNIDGTFFPKSAEELLRERQFPSVP 337
>ref|NP_001178171.1| neuroligin-2 [Bos taurus].
Length = 835
Score = 232 bits (591), Expect = 5e-61
Identities = 146/384 (38%), Positives = 199/384 (51%), Gaps = 43/384 (11%)
Frame = +3
Query: 39 MWLLPLVLTSLASSATWAGQPASP-----------------PVVDTAQGRVLGKYVSLEG 167
MWLL L L LA + G P PVV+TA GRV G L
Sbjct: 1 MWLLALCLVGLAGAQRGGGGPGGGAPGGPGLGLSGLGEERFPVVNTAYGRVRGVRRELNN 60
Query: 168 -LAQPVAVFLGVPFAKPPLGSLRFAPPQPAEPWSFVKNTTSYPPMCCQEPIGGQ---MLS 335
+ PV FLGVP+A PPLG+ RF PP+ W V+N T+ PP C Q G ML
Sbjct: 61 EILGPVVQFLGVPYATPPLGARRFQPPEAPASWPGVRNATTLPPACPQNLHGALPAIMLP 120
Query: 336 DLFTNRKERL---IPEFSEDCLYLNIYTPAD---LTKR----------------GRLPVM 449
FT+ E + SEDCLYLN+Y P + LTK+ G+ PVM
Sbjct: 121 VWFTDNLEAAATYVQNQSEDCLYLNLYVPTEDGPLTKKRDEATLNPPDTDIRDSGKKPVM 180
Query: 450 VWIHGGGLVVGGASTYDGLALAAHENVVVVAIQYRLGIWGFFSTGDEHSRGNWGHLDQVA 629
+++HGG + G + +DG LAA+ NV+V + YRLG+ GF STGD+ ++GN+G LDQ+
Sbjct: 181 LFLHGGSYMEGTGNMFDGSVLAAYGNVIVATLNYRLGVLGFLSTGDQAAKGNYGLLDQIQ 240
Query: 630 ALHWVQENIANFGGDPGSVTIFGESAGGESVSVLVLSPLAKNLFHRAISESGVAFTAGLV 809
AL W+ ENIA+FGGDP +TIFG AG V++L+LS ++ LF +AI++SG A ++ V
Sbjct: 241 ALRWLSENIAHFGGDPERITIFGSGAGASCVNLLILSHHSEGLFQKAIAQSGTAISSWSV 300
Query: 810 RKDMKAAAKQIAVLAGW*NTTSAVFVHCLRQKSEDELLDLTLKMKFFALDLHGDPRESHP 989
+ +A G SA V CLR+K EL+D ++ P H
Sbjct: 301 NYQPLKYTRLLAAKVGCDREDSAEAVECLRRKPSRELVDQDVQ-----------PARYHI 349
Query: 990 FLTTVVDEVLLPQMPEGDLAEKDF 1061
VVD ++P PE + + +F
Sbjct: 350 AFGPVVDGDVVPDDPEILMQQGEF 373
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 50,716,643
Number of extensions: 1677683
Number of successful extensions: 8018
Number of sequences better than 1.0e-05: 21
Number of HSP's gapped: 7873
Number of HSP's successfully gapped: 23
Length of query: 361
Length of database: 17,681,374
Length adjustment: 103
Effective length of query: 258
Effective length of database: 14,273,310
Effective search space: 3682513980
Effective search space used: 3682513980
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-000829
(1085 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001003085.1| liver carboxylesterase 1 [Canis lupus famili... 569 e-162
Alignment gi|XP_546889.2| PREDICTED: similar to carboxylesterase 2 isofor... 315 6e-86
Alignment gi|XP_864764.1| PREDICTED: similar to carboxylesterase 2 isofor... 315 6e-86
Alignment gi|XP_864741.1| PREDICTED: similar to carboxylesterase 2 isofor... 315 6e-86
Alignment gi|XP_864723.1| PREDICTED: similar to carboxylesterase 2 isofor... 307 1e-83
Alignment gi|NP_001003969.1| carboxylesterase 5A precursor [Canis lupus f... 281 8e-76
Alignment gi|XP_859030.1| PREDICTED: similar to neuroligin 2 isoform 8 [C... 237 1e-62
Alignment gi|XP_858950.1| PREDICTED: similar to neuroligin 2 isoform 7 [C... 234 8e-62
Alignment gi|XP_858870.1| PREDICTED: similar to neuroligin 2 isoform 6 [C... 234 1e-61
Alignment gi|XP_536620.2| PREDICTED: similar to neuroligin 2 isoform 1 [C... 231 9e-61
>ref|NP_001003085.1| liver carboxylesterase 1 [Canis lupus familiaris].
Length = 565
Score = 569 bits (1467), Expect = e-162
Identities = 281/345 (81%), Positives = 306/345 (88%)
Frame = +3
Query: 39 MWLLPLVLTSLASSATWAGQPASPPVVDTAQGRVLGKYVSLEGLAQPVAVFLGVPFAKPP 218
MWL LVLTSLA+S W G P+ PPVVDT QG+VLGKYVSLEG AQPVAVFLGVPFAKPP
Sbjct: 1 MWLFDLVLTSLATSMAW-GYPSLPPVVDTVQGKVLGKYVSLEGFAQPVAVFLGVPFAKPP 59
Query: 219 LGSLRFAPPQPAEPWSFVKNTTSYPPMCCQEPIGGQMLSDLFTNRKERLIPEFSEDCLYL 398
LG LRFAPPQ AEPW+FVKNTTSYPPMC Q+ +GGQ+LS+LFTNRK+ + +FSEDCLYL
Sbjct: 60 LGPLRFAPPQAAEPWNFVKNTTSYPPMCSQDAVGGQVLSELFTNRKDNIPLKFSEDCLYL 119
Query: 399 NIYTPADLTKRGRLPVMVWIHGGGLVVGGASTYDGLALAAHENVVVVAIQYRLGIWGFFS 578
NIYTPADLTK RLPVMVWIHGGGLVVGGASTYDGLAL+AHENVVVV IQYRLGIWGFFS
Sbjct: 120 NIYTPADLTKNSRLPVMVWIHGGGLVVGGASTYDGLALSAHENVVVVTIQYRLGIWGFFS 179
Query: 579 TGDEHSRGNWGHLDQVAALHWVQENIANFGGDPGSVTIFGESAGGESVSVLVLSPLAKNL 758
TGDEH RGNWGHLDQ+AAL WVQENIANFGG+PGSVTIFGESAGGESVSVLVLSPLAKNL
Sbjct: 180 TGDEHGRGNWGHLDQLAALRWVQENIANFGGNPGSVTIFGESAGGESVSVLVLSPLAKNL 239
Query: 759 FHRAISESGVAFTAGLVRKDMKAAAKQIAVLAGW*NTTSAVFVHCLRQKSEDELLDLTLK 938
FHRAISESGVA TA LV+KDMK A+QIAV AG +TTSAV VHCLRQK+EDELL+++LK
Sbjct: 240 FHRAISESGVALTAALVKKDMKDTAQQIAVFAGCKSTTSAVLVHCLRQKTEDELLEVSLK 299
Query: 939 MKFFALDLHGDPRESHPFLTTVVDEVLLPQMPEGDLAEKDFTLSP 1073
+KFF LDL GDPRES+PFL TVVD VLLP+MP+ LAEK F P
Sbjct: 300 LKFFTLDLFGDPRESYPFLPTVVDGVLLPKMPQEILAEKKFNSVP 344
>ref|XP_546889.2| PREDICTED: similar to carboxylesterase 2 isoform 1 isoform 1 [Canis
familiaris].
Length = 559
Score = 315 bits (806), Expect = 6e-86
Identities = 175/344 (50%), Positives = 214/344 (62%)
Frame = +3
Query: 45 LLPLVLTSLASSATWAGQPASPPVVDTAQGRVLGKYVSLEGLAQPVAVFLGVPFAKPPLG 224
LLPLVL GQ ++ P+ T G+V G V +EG V FLG+PFAKPPLG
Sbjct: 18 LLPLVLGR--------GQDSASPIRTTHTGQVRGSLVHVEGTDVGVHTFLGIPFAKPPLG 69
Query: 225 SLRFAPPQPAEPWSFVKNTTSYPPMCCQEPIGGQMLSDLFTNRKERLIPEFSEDCLYLNI 404
LRFAPP+P EPWS VK+ TS+P MC Q ++ N L SEDCLYL+I
Sbjct: 70 PLRFAPPEPPEPWSGVKDGTSHPAMCVQNITTANAVALKLLNMTLPLT-SMSEDCLYLSI 128
Query: 405 YTPADLTKRGRLPVMVWIHGGGLVVGGASTYDGLALAAHENVVVVAIQYRLGIWGFFSTG 584
YTPA ++ LPV VWIHGG L++G AS YDG AL A E++VVV IQYRLG+ GFFSTG
Sbjct: 129 YTPAHASEGSNLPVSVWIHGGSLMIGMASMYDGSALVAFEDLVVVIIQYRLGVLGFFSTG 188
Query: 585 DEHSRGNWGHLDQVAALHWVQENIANFGGDPGSVTIFGESAGGESVSVLVLSPLAKNLFH 764
D+H+ GNWG+LDQVAAL W+Q+NIA FGGDPG VTIFG SAGG SVS+ V+SP+++ LFH
Sbjct: 189 DKHATGNWGYLDQVAALRWIQQNIAYFGGDPGCVTIFGGSAGGISVSLHVVSPMSQGLFH 248
Query: 765 RAISESGVAFTAGLVRKDMKAAAKQIAVLAGW*NTTSAVFVHCLRQKSEDELLDLTLKMK 944
RAI ESGVA GL ++A L+G S V CLR KSE+E+L ++ K
Sbjct: 249 RAIMESGVALLPGLTVSSSDEVTTRVAKLSGCGQVDSEALVGCLRSKSEEEILAISKHFK 308
Query: 945 FFALDLHGDPRESHPFLTTVVDEVLLPQMPEGDLAEKDFTLSPT 1076
FF VVD LP+ P+ LA DF P+
Sbjct: 309 FF---------------PAVVDGTFLPRHPQELLAFADFQPVPS 337
>ref|XP_864764.1| PREDICTED: similar to carboxylesterase 2 isoform 2 isoform 4 [Canis
familiaris].
Length = 545
Score = 315 bits (806), Expect = 6e-86
Identities = 175/344 (50%), Positives = 214/344 (62%)
Frame = +3
Query: 45 LLPLVLTSLASSATWAGQPASPPVVDTAQGRVLGKYVSLEGLAQPVAVFLGVPFAKPPLG 224
LLPLVL GQ ++ P+ T G+V G V +EG V FLG+PFAKPPLG
Sbjct: 18 LLPLVLGR--------GQDSASPIRTTHTGQVRGSLVHVEGTDVGVHTFLGIPFAKPPLG 69
Query: 225 SLRFAPPQPAEPWSFVKNTTSYPPMCCQEPIGGQMLSDLFTNRKERLIPEFSEDCLYLNI 404
LRFAPP+P EPWS VK+ TS+P MC Q ++ N L SEDCLYL+I
Sbjct: 70 PLRFAPPEPPEPWSGVKDGTSHPAMCVQNITTANAVALKLLNMTLPLT-SMSEDCLYLSI 128
Query: 405 YTPADLTKRGRLPVMVWIHGGGLVVGGASTYDGLALAAHENVVVVAIQYRLGIWGFFSTG 584
YTPA ++ LPV VWIHGG L++G AS YDG AL A E++VVV IQYRLG+ GFFSTG
Sbjct: 129 YTPAHASEGSNLPVSVWIHGGSLMIGMASMYDGSALVAFEDLVVVIIQYRLGVLGFFSTG 188
Query: 585 DEHSRGNWGHLDQVAALHWVQENIANFGGDPGSVTIFGESAGGESVSVLVLSPLAKNLFH 764
D+H+ GNWG+LDQVAAL W+Q+NIA FGGDPG VTIFG SAGG SVS+ V+SP+++ LFH
Sbjct: 189 DKHATGNWGYLDQVAALRWIQQNIAYFGGDPGCVTIFGGSAGGISVSLHVVSPMSQGLFH 248
Query: 765 RAISESGVAFTAGLVRKDMKAAAKQIAVLAGW*NTTSAVFVHCLRQKSEDELLDLTLKMK 944
RAI ESGVA GL ++A L+G S V CLR KSE+E+L ++ K
Sbjct: 249 RAIMESGVALLPGLTVSSSDEVTTRVAKLSGCGQVDSEALVGCLRSKSEEEILAISKHFK 308
Query: 945 FFALDLHGDPRESHPFLTTVVDEVLLPQMPEGDLAEKDFTLSPT 1076
FF VVD LP+ P+ LA DF P+
Sbjct: 309 FF---------------PAVVDGTFLPRHPQELLAFADFQPVPS 337
>ref|XP_864741.1| PREDICTED: similar to carboxylesterase 2 isoform 1 isoform 3 [Canis
familiaris].
Length = 558
Score = 315 bits (806), Expect = 6e-86
Identities = 175/344 (50%), Positives = 214/344 (62%)
Frame = +3
Query: 45 LLPLVLTSLASSATWAGQPASPPVVDTAQGRVLGKYVSLEGLAQPVAVFLGVPFAKPPLG 224
LLPLVL GQ ++ P+ T G+V G V +EG V FLG+PFAKPPLG
Sbjct: 18 LLPLVLGR--------GQDSASPIRTTHTGQVRGSLVHVEGTDVGVHTFLGIPFAKPPLG 69
Query: 225 SLRFAPPQPAEPWSFVKNTTSYPPMCCQEPIGGQMLSDLFTNRKERLIPEFSEDCLYLNI 404
LRFAPP+P EPWS VK+ TS+P MC Q ++ N L SEDCLYL+I
Sbjct: 70 PLRFAPPEPPEPWSGVKDGTSHPAMCVQNITTANAVALKLLNMTLPLT-SMSEDCLYLSI 128
Query: 405 YTPADLTKRGRLPVMVWIHGGGLVVGGASTYDGLALAAHENVVVVAIQYRLGIWGFFSTG 584
YTPA ++ LPV VWIHGG L++G AS YDG AL A E++VVV IQYRLG+ GFFSTG
Sbjct: 129 YTPAHASEGSNLPVSVWIHGGSLMIGMASMYDGSALVAFEDLVVVIIQYRLGVLGFFSTG 188
Query: 585 DEHSRGNWGHLDQVAALHWVQENIANFGGDPGSVTIFGESAGGESVSVLVLSPLAKNLFH 764
D+H+ GNWG+LDQVAAL W+Q+NIA FGGDPG VTIFG SAGG SVS+ V+SP+++ LFH
Sbjct: 189 DKHATGNWGYLDQVAALRWIQQNIAYFGGDPGCVTIFGGSAGGISVSLHVVSPMSQGLFH 248
Query: 765 RAISESGVAFTAGLVRKDMKAAAKQIAVLAGW*NTTSAVFVHCLRQKSEDELLDLTLKMK 944
RAI ESGVA GL ++A L+G S V CLR KSE+E+L ++ K
Sbjct: 249 RAIMESGVALLPGLTVSSSDEVTTRVAKLSGCGQVDSEALVGCLRSKSEEEILAISKHFK 308
Query: 945 FFALDLHGDPRESHPFLTTVVDEVLLPQMPEGDLAEKDFTLSPT 1076
FF VVD LP+ P+ LA DF P+
Sbjct: 309 FF---------------PAVVDGTFLPRHPQELLAFADFQPVPS 337
>ref|XP_864723.1| PREDICTED: similar to carboxylesterase 2 isoform 1 isoform 2 [Canis
familiaris].
Length = 568
Score = 307 bits (787), Expect = 1e-83
Identities = 175/353 (49%), Positives = 214/353 (60%), Gaps = 9/353 (2%)
Frame = +3
Query: 45 LLPLVLTSLASSATWAGQPASPPVVDTAQGRVLGKYVSLEGLAQPVAVFLGVPFAKPPLG 224
LLPLVL GQ ++ P+ T G+V G V +EG V FLG+PFAKPPLG
Sbjct: 18 LLPLVLGR--------GQDSASPIRTTHTGQVRGSLVHVEGTDVGVHTFLGIPFAKPPLG 69
Query: 225 SLRFAPPQPAEPWSFVKNTTSYPPMCCQEPIGGQMLSDLFTNRKERLIPEFSEDCLYLNI 404
LRFAPP+P EPWS VK+ TS+P MC Q ++ N L SEDCLYL+I
Sbjct: 70 PLRFAPPEPPEPWSGVKDGTSHPAMCVQNITTANAVALKLLNMTLPLT-SMSEDCLYLSI 128
Query: 405 YTPADLTKRGRLPVMVWIHGGGLVVGGASTYDGLALAAHENVVVVAIQYRLGIWGFFSTG 584
YTPA ++ LPV VWIHGG L++G AS YDG AL A E++VVV IQYRLG+ GFFSTG
Sbjct: 129 YTPAHASEGSNLPVSVWIHGGSLMIGMASMYDGSALVAFEDLVVVIIQYRLGVLGFFSTG 188
Query: 585 DEHSRGNWGHLDQVAALHWVQENIANFGGDPGSVTIFGESAGGESVSVLVLSPLAKNLFH 764
D+H+ GNWG+LDQVAAL W+Q+NIA FGGDPG VTIFG SAGG SVS+ V+SP+++ LFH
Sbjct: 189 DKHATGNWGYLDQVAALRWIQQNIAYFGGDPGCVTIFGGSAGGISVSLHVVSPMSQGLFH 248
Query: 765 RAISESGVAFTAGLVRKDM---------KAAAKQIAVLAGW*NTTSAVFVHCLRQKSEDE 917
RAI ESGVA GL ++A L+G S V CLR KSE+E
Sbjct: 249 RAIMESGVALLPGLTVSSSDEVTTVSIPSCEKPEVAKLSGCGQVDSEALVGCLRSKSEEE 308
Query: 918 LLDLTLKMKFFALDLHGDPRESHPFLTTVVDEVLLPQMPEGDLAEKDFTLSPT 1076
+L ++ KFF VVD LP+ P+ LA DF P+
Sbjct: 309 ILAISKHFKFF---------------PAVVDGTFLPRHPQELLAFADFQPVPS 346
>ref|NP_001003969.1| carboxylesterase 5A precursor [Canis lupus familiaris].
Length = 575
Score = 281 bits (719), Expect = 8e-76
Identities = 164/335 (48%), Positives = 195/335 (58%), Gaps = 2/335 (0%)
Frame = +3
Query: 78 SATWAGQPASPPVVDTAQGRVLGKYVSLEGLAQPVAVFLGVPFAKPPLGSLRFAPPQPAE 257
+A G A PV T G V GK ++ G PV VFLG+PFA PPLG LRF P+PA
Sbjct: 20 AAATEGPAADAPVRSTRLGWVRGKQATVLGSTMPVNVFLGIPFAAPPLGPLRFKRPKPAL 79
Query: 258 PWSFVKNTTSYPPMCCQEPIGGQMLSDLFTNRKERLIPEFSEDCLYLNIYTPADLTKRGR 437
W+ ++ TSYP +C Q + +LSD + E SEDCLYLNIY PA +
Sbjct: 80 LWNDSRDATSYPKLCLQNSVW--LLSDQHFLKVHYPNLEVSEDCLYLNIYAPAHANTGSK 137
Query: 438 LPVMVWIHGGGLVVGGASTYDGLALAAHENVVVVAIQYRLGIWGFFSTGDEHSRGNWGHL 617
LPVMVW GG G AS +DG ALAA+E+V++V QYRLGI+GFF TGD+H+ GNW L
Sbjct: 138 LPVMVWFPGGAFETGSASIFDGSALAAYEDVLIVTTQYRLGIFGFFKTGDQHAPGNWAFL 197
Query: 618 DQVAALHWVQENIANFGGDPGSVTIFGESAGGESVSVLVLSPLAKNLFHRAISESGVAFT 797
DQ+AAL WVQENI FGGDP SVTIFGESAG SVS LVLSP+A LFH+AI ESGVA
Sbjct: 198 DQLAALTWVQENIEFFGGDPHSVTIFGESAGAISVSGLVLSPMASGLFHKAIMESGVAII 257
Query: 798 AGLVRKD--MKAAAKQIAVLAGW*NTTSAVFVHCLRQKSEDELLDLTLKMKFFALDLHGD 971
L D + IA + G + S + CLR KS +ELLD+ K K F
Sbjct: 258 PFLRAPDDERNEDLQVIARICGCNVSDSVALLQCLRAKSSEELLDINKKTKSF------- 310
Query: 972 PRESHPFLTTVVDEVLLPQMPEGDLAEKDFTLSPT 1076
T VVD P P L EK F P+
Sbjct: 311 --------TRVVDGFFFPDEPLDLLTEKTFNSIPS 337
>ref|XP_859030.1| PREDICTED: similar to neuroligin 2 isoform 8 [Canis familiaris].
Length = 818
Score = 237 bits (605), Expect = 1e-62
Identities = 145/367 (39%), Positives = 197/367 (53%), Gaps = 26/367 (7%)
Frame = +3
Query: 39 MWLLPLVLTSLASSATWAG-----QPASP------------PVVDTAQGRVLGKYVSLEG 167
MWLL L L LA + G P SP PVV+TA GRV G L
Sbjct: 1 MWLLALCLVGLAGAQRGGGGPGGSAPGSPGLGLSSLGEERFPVVNTAYGRVRGVRRELNN 60
Query: 168 -LAQPVAVFLGVPFAKPPLGSLRFAPPQPAEPWSFVKNTTSYPPMCCQEPIGGQ---MLS 335
+ PV FLGVP+A PPLG+ RF PP+ W V+N T+ PP C Q G ML
Sbjct: 61 EILGPVVQFLGVPYATPPLGARRFQPPEAPASWPGVRNATTLPPACPQNLHGALPAIMLP 120
Query: 336 DLFTNRKERL---IPEFSEDCLYLNIYTPA--DLTKRGRLPVMVWIHGGGLVVGGASTYD 500
FT+ E + SEDCLYLN+Y P D+ G+ PVM+++HGG + G + +D
Sbjct: 121 VWFTDNLEAAATYVQNQSEDCLYLNLYVPTEDDIRDSGKKPVMLFLHGGSYMEGTGNMFD 180
Query: 501 GLALAAHENVVVVAIQYRLGIWGFFSTGDEHSRGNWGHLDQVAALHWVQENIANFGGDPG 680
G LAA+ NV+V + YRLG+ GF STGD+ ++GN+G LDQ+ AL W+ ENIA+FGGDP
Sbjct: 181 GSVLAAYGNVIVATLNYRLGVLGFLSTGDQAAKGNYGLLDQIQALRWLSENIAHFGGDPE 240
Query: 681 SVTIFGESAGGESVSVLVLSPLAKNLFHRAISESGVAFTAGLVRKDMKAAAKQIAVLAGW 860
+TIFG AG V++L+LS ++ LF +AI++SG A ++ V + +A G
Sbjct: 241 RITIFGSGAGASCVNLLILSHHSEGLFQKAIAQSGTAISSWSVNYQPLKYTRLLAAKVGC 300
Query: 861 *NTTSAVFVHCLRQKSEDELLDLTLKMKFFALDLHGDPRESHPFLTTVVDEVLLPQMPEG 1040
S V CLR+K EL+D ++ P H VVD ++P PE
Sbjct: 301 DREDSTEAVECLRRKPSRELVDQDVQ-----------PARYHIAFGPVVDGDVVPDDPEI 349
Query: 1041 DLAEKDF 1061
+ + +F
Sbjct: 350 LMQQGEF 356
>ref|XP_858950.1| PREDICTED: similar to neuroligin 2 isoform 7 [Canis familiaris].
Length = 825
Score = 234 bits (598), Expect = 8e-62
Identities = 145/374 (38%), Positives = 197/374 (52%), Gaps = 33/374 (8%)
Frame = +3
Query: 39 MWLLPLVLTSLASSATWAG-----QPASP------------PVVDTAQGRVLGKYVSLEG 167
MWLL L L LA + G P SP PVV+TA GRV G L
Sbjct: 1 MWLLALCLVGLAGAQRGGGGPGGSAPGSPGLGLSSLGEERFPVVNTAYGRVRGVRRELNN 60
Query: 168 -LAQPVAVFLGVPFAKPPLGSLRFAPPQPAEPWSFVKNTTSYPPMCCQEPIGGQ---MLS 335
+ PV FLGVP+A PPLG+ RF PP+ W V+N T+ PP C Q G ML
Sbjct: 61 EILGPVVQFLGVPYATPPLGARRFQPPEAPASWPGVRNATTLPPACPQNLHGALPAIMLP 120
Query: 336 DLFTNRKERL---IPEFSEDCLYLNIYTPA---------DLTKRGRLPVMVWIHGGGLVV 479
FT+ E + SEDCLYLN+Y P D+ G+ PVM+++HGG +
Sbjct: 121 VWFTDNLEAAATYVQNQSEDCLYLNLYVPTEDETFFSFLDIRDSGKKPVMLFLHGGSYME 180
Query: 480 GGASTYDGLALAAHENVVVVAIQYRLGIWGFFSTGDEHSRGNWGHLDQVAALHWVQENIA 659
G + +DG LAA+ NV+V + YRLG+ GF STGD+ ++GN+G LDQ+ AL W+ ENIA
Sbjct: 181 GTGNMFDGSVLAAYGNVIVATLNYRLGVLGFLSTGDQAAKGNYGLLDQIQALRWLSENIA 240
Query: 660 NFGGDPGSVTIFGESAGGESVSVLVLSPLAKNLFHRAISESGVAFTAGLVRKDMKAAAKQ 839
+FGGDP +TIFG AG V++L+LS ++ LF +AI++SG A ++ V +
Sbjct: 241 HFGGDPERITIFGSGAGASCVNLLILSHHSEGLFQKAIAQSGTAISSWSVNYQPLKYTRL 300
Query: 840 IAVLAGW*NTTSAVFVHCLRQKSEDELLDLTLKMKFFALDLHGDPRESHPFLTTVVDEVL 1019
+A G S V CLR+K EL+D ++ P H VVD +
Sbjct: 301 LAAKVGCDREDSTEAVECLRRKPSRELVDQDVQ-----------PARYHIAFGPVVDGDV 349
Query: 1020 LPQMPEGDLAEKDF 1061
+P PE + + +F
Sbjct: 350 VPDDPEILMQQGEF 363
>ref|XP_858870.1| PREDICTED: similar to neuroligin 2 isoform 6 [Canis familiaris].
Length = 824
Score = 234 bits (597), Expect = 1e-61
Identities = 146/373 (39%), Positives = 197/373 (52%), Gaps = 32/373 (8%)
Frame = +3
Query: 39 MWLLPLVLTSLASSATWAG-----QPASP------------PVVDTAQGRVLGKYVSLEG 167
MWLL L L LA + G P SP PVV+TA GRV G L
Sbjct: 1 MWLLALCLVGLAGAQRGGGGPGGSAPGSPGLGLSSLGEERFPVVNTAYGRVRGVRRELNN 60
Query: 168 -LAQPVAVFLGVPFAKPPLGSLRFAPPQPAEPWSFVKNTTSYPPMCCQEPIGGQ---MLS 335
+ PV FLGVP+A PPLG+ RF PP+ W V+N T+ PP C Q G ML
Sbjct: 61 EILGPVVQFLGVPYATPPLGARRFQPPEAPASWPGVRNATTLPPACPQNLHGALPAIMLP 120
Query: 336 DLFTNRKERL---IPEFSEDCLYLNIYTPA--DLTKRGRLPVMVWIHGGGLVVGGASTYD 500
FT+ E + SEDCLYLN+Y P D+ G+ PVM+++HGG + G + +D
Sbjct: 121 VWFTDNLEAAATYVQNQSEDCLYLNLYVPTEDDIRDSGKKPVMLFLHGGSYMEGTGNMFD 180
Query: 501 GLALAAHENVVVVAIQYRLGIWGFFSTGDEHSRGNWGHLDQVAALHWVQENIANFGGDPG 680
G LAA+ NV+V + YRLG+ GF STGD+ ++GN+G LDQ+ AL W+ ENIA+FGGDP
Sbjct: 181 GSVLAAYGNVIVATLNYRLGVLGFLSTGDQAAKGNYGLLDQIQALRWLSENIAHFGGDPE 240
Query: 681 SVTIFGESAGGESVSVLVLS------PLAKNLFHRAISESGVAFTAGLVRKDMKAAAKQI 842
+TIFG AG V++L+LS P+ LF +AI++SG A ++ V + +
Sbjct: 241 RITIFGSGAGASCVNLLILSHHSEGLPVLPGLFQKAIAQSGTAISSWSVNYQPLKYTRLL 300
Query: 843 AVLAGW*NTTSAVFVHCLRQKSEDELLDLTLKMKFFALDLHGDPRESHPFLTTVVDEVLL 1022
A G S V CLR+K EL+D ++ P H VVD ++
Sbjct: 301 AAKVGCDREDSTEAVECLRRKPSRELVDQDVQ-----------PARYHIAFGPVVDGDVV 349
Query: 1023 PQMPEGDLAEKDF 1061
P PE + + +F
Sbjct: 350 PDDPEILMQQGEF 362
>ref|XP_536620.2| PREDICTED: similar to neuroligin 2 isoform 1 [Canis familiaris].
Length = 838
Score = 231 bits (589), Expect = 9e-61
Identities = 146/387 (37%), Positives = 198/387 (51%), Gaps = 46/387 (11%)
Frame = +3
Query: 39 MWLLPLVLTSLASSATWAG-----QPASP------------PVVDTAQGRVLGKYVSLEG 167
MWLL L L LA + G P SP PVV+TA GRV G L
Sbjct: 1 MWLLALCLVGLAGAQRGGGGPGGSAPGSPGLGLSSLGEERFPVVNTAYGRVRGVRRELNN 60
Query: 168 -LAQPVAVFLGVPFAKPPLGSLRFAPPQPAEPWSFVKNTTSYPPMCCQEPIGGQ---MLS 335
+ PV FLGVP+A PPLG+ RF PP+ W V+N T+ PP C Q G ML
Sbjct: 61 EILGPVVQFLGVPYATPPLGARRFQPPEAPASWPGVRNATTLPPACPQNLHGALPAIMLP 120
Query: 336 DLFTNRKERL---IPEFSEDCLYLNIYTP----------------------ADLTKRGRL 440
FT+ E + SEDCLYLN+Y P AD+ G+
Sbjct: 121 VWFTDNLEAAATYVQNQSEDCLYLNLYVPTEDGKGAAKHGQNLAHRPPPPHADIRDSGKK 180
Query: 441 PVMVWIHGGGLVVGGASTYDGLALAAHENVVVVAIQYRLGIWGFFSTGDEHSRGNWGHLD 620
PVM+++HGG + G + +DG LAA+ NV+V + YRLG+ GF STGD+ ++GN+G LD
Sbjct: 181 PVMLFLHGGSYMEGTGNMFDGSVLAAYGNVIVATLNYRLGVLGFLSTGDQAAKGNYGLLD 240
Query: 621 QVAALHWVQENIANFGGDPGSVTIFGESAGGESVSVLVLSPLAKNLFHRAISESGVAFTA 800
Q+ AL W+ ENIA+FGGDP +TIFG AG V++L+LS ++ LF +AI++SG A ++
Sbjct: 241 QIQALRWLSENIAHFGGDPERITIFGSGAGASCVNLLILSHHSEGLFQKAIAQSGTAISS 300
Query: 801 GLVRKDMKAAAKQIAVLAGW*NTTSAVFVHCLRQKSEDELLDLTLKMKFFALDLHGDPRE 980
V + +A G S V CLR+K EL+D ++ P
Sbjct: 301 WSVNYQPLKYTRLLAAKVGCDREDSTEAVECLRRKPSRELVDQDVQ-----------PAR 349
Query: 981 SHPFLTTVVDEVLLPQMPEGDLAEKDF 1061
H VVD ++P PE + + +F
Sbjct: 350 YHIAFGPVVDGDVVPDDPEILMQQGEF 376
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 52,935,320
Number of extensions: 1728197
Number of successful extensions: 8409
Number of sequences better than 1.0e-05: 35
Number of HSP's gapped: 8236
Number of HSP's successfully gapped: 37
Length of query: 361
Length of database: 18,874,504
Length adjustment: 104
Effective length of query: 257
Effective length of database: 15,407,560
Effective search space: 3959742920
Effective search space used: 3959742920
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-000829
(1085 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001020366.1| liver carboxylesterase 1 isoform a precursor... 541 e-154
Alignment gi|NP_001020365.1| liver carboxylesterase 1 isoform b precursor... 535 e-152
Alignment gi|NP_001257.4| liver carboxylesterase 1 isoform c precursor [H... 535 e-152
Alignment gi|NP_003860.2| cocaine esterase isoform 1 [Homo sapiens]. 304 8e-83
Alignment gi|NP_932327.1| cocaine esterase isoform 2 [Homo sapiens]. 304 8e-83
Alignment gi|NP_776176.5| carboxylesterase 4A isoform 1 precursor [Homo s... 303 1e-82
Alignment gi|NP_001172106.1| carboxylesterase 3 isoform 2 precursor [Homo... 287 1e-77
Alignment gi|NP_079198.2| carboxylesterase 3 isoform 1 precursor [Homo sa... 287 1e-77
Alignment gi|NP_001137157.1| carboxylesterase 5A isoform 1 precursor [Hom... 275 5e-74
Alignment gi|NP_659461.1| carboxylesterase 5A isoform 2 precursor [Homo s... 275 5e-74
>ref|NP_001020366.1| liver carboxylesterase 1 isoform a precursor [Homo sapiens].
Length = 568
Score = 541 bits (1394), Expect(2) = e-154
Identities = 265/346 (76%), Positives = 298/346 (86%), Gaps = 1/346 (0%)
Frame = +3
Query: 39 MWLLPLVLTSLASSATWAGQPASPPVVDTAQGRVLGKYVSLEGLAQPVAVFLGVPFAKPP 218
MWL +L +L++SA WAG P+SPPVVDT G+VLGK+VSLEG AQPVA+FLG+PFAKPP
Sbjct: 1 MWLRAFILATLSASAAWAGHPSSPPVVDTVHGKVLGKFVSLEGFAQPVAIFLGIPFAKPP 60
Query: 219 LGSLRFAPPQPAEPWSFVKNTTSYPPMCCQEPIGGQMLSDLFTNRKERLIPEFSEDCLYL 398
LG LRF PPQPAEPWSFVKN TSYPPMC Q+P GQ+LS+LFTNRKE + + SEDCLYL
Sbjct: 61 LGPLRFTPPQPAEPWSFVKNATSYPPMCTQDPKAGQLLSELFTNRKENIPLKLSEDCLYL 120
Query: 399 NIYTPADLTKRGRLPVMVWIHGGGLVVGGASTYDGLALAAHENVVVVAIQYRLGIWGFFS 578
NIYTPADLTK+ RLPVMVWIHGGGL+VG ASTYDGLALAAHENVVVV IQYRLGIWGFFS
Sbjct: 121 NIYTPADLTKKNRLPVMVWIHGGGLMVGAASTYDGLALAAHENVVVVTIQYRLGIWGFFS 180
Query: 579 TGDEHSRGNWGHLDQVAALHWVQENIANFGGDPGSVTIFGESAGGESVSVLVLSPLAKNL 758
TGDEHSRGNWGHLDQVAAL WVQ+NIA+FGG+PGSVTIFGESAGGESVSVLVLSPLAKNL
Sbjct: 181 TGDEHSRGNWGHLDQVAALRWVQDNIASFGGNPGSVTIFGESAGGESVSVLVLSPLAKNL 240
Query: 759 FHRAISESGVAFTAGLVRK-DMKAAAKQIAVLAGW*NTTSAVFVHCLRQKSEDELLDLTL 935
FHRAISESGVA T+ LV+K D+K A+QIA+ AG TTSAV VHCLRQK+E+ELL+ TL
Sbjct: 241 FHRAISESGVALTSVLVKKGDVKPLAEQIAITAGCKTTTSAVMVHCLRQKTEEELLETTL 300
Query: 936 KMKFFALDLHGDPRESHPFLTTVVDEVLLPQMPEGDLAEKDFTLSP 1073
KMKF +LDL GDPRES P L TV+D +LL + PE AE++F P
Sbjct: 301 KMKFLSLDLQGDPRESQPLLGTVIDGMLLLKTPEELQAERNFHTVP 346
Score = 23.9 bits (50), Expect(2) = e-154
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = +2
Query: 1052 KGFHTVPYIVG 1084
+ FHTVPY+VG
Sbjct: 340 RNFHTVPYMVG 350
>ref|NP_001020365.1| liver carboxylesterase 1 isoform b precursor [Homo sapiens].
Length = 567
Score = 535 bits (1378), Expect(2) = e-152
Identities = 264/346 (76%), Positives = 297/346 (85%), Gaps = 1/346 (0%)
Frame = +3
Query: 39 MWLLPLVLTSLASSATWAGQPASPPVVDTAQGRVLGKYVSLEGLAQPVAVFLGVPFAKPP 218
MWL +L +L++SA W G P+SPPVVDT G+VLGK+VSLEG AQPVA+FLG+PFAKPP
Sbjct: 1 MWLRAFILATLSASAAW-GHPSSPPVVDTVHGKVLGKFVSLEGFAQPVAIFLGIPFAKPP 59
Query: 219 LGSLRFAPPQPAEPWSFVKNTTSYPPMCCQEPIGGQMLSDLFTNRKERLIPEFSEDCLYL 398
LG LRF PPQPAEPWSFVKN TSYPPMC Q+P GQ+LS+LFTNRKE + + SEDCLYL
Sbjct: 60 LGPLRFTPPQPAEPWSFVKNATSYPPMCTQDPKAGQLLSELFTNRKENIPLKLSEDCLYL 119
Query: 399 NIYTPADLTKRGRLPVMVWIHGGGLVVGGASTYDGLALAAHENVVVVAIQYRLGIWGFFS 578
NIYTPADLTK+ RLPVMVWIHGGGL+VG ASTYDGLALAAHENVVVV IQYRLGIWGFFS
Sbjct: 120 NIYTPADLTKKNRLPVMVWIHGGGLMVGAASTYDGLALAAHENVVVVTIQYRLGIWGFFS 179
Query: 579 TGDEHSRGNWGHLDQVAALHWVQENIANFGGDPGSVTIFGESAGGESVSVLVLSPLAKNL 758
TGDEHSRGNWGHLDQVAAL WVQ+NIA+FGG+PGSVTIFGESAGGESVSVLVLSPLAKNL
Sbjct: 180 TGDEHSRGNWGHLDQVAALRWVQDNIASFGGNPGSVTIFGESAGGESVSVLVLSPLAKNL 239
Query: 759 FHRAISESGVAFTAGLVRK-DMKAAAKQIAVLAGW*NTTSAVFVHCLRQKSEDELLDLTL 935
FHRAISESGVA T+ LV+K D+K A+QIA+ AG TTSAV VHCLRQK+E+ELL+ TL
Sbjct: 240 FHRAISESGVALTSVLVKKGDVKPLAEQIAITAGCKTTTSAVMVHCLRQKTEEELLETTL 299
Query: 936 KMKFFALDLHGDPRESHPFLTTVVDEVLLPQMPEGDLAEKDFTLSP 1073
KMKF +LDL GDPRES P L TV+D +LL + PE AE++F P
Sbjct: 300 KMKFLSLDLQGDPRESQPLLGTVIDGMLLLKTPEELQAERNFHTVP 345
Score = 23.9 bits (50), Expect(2) = e-152
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = +2
Query: 1052 KGFHTVPYIVG 1084
+ FHTVPY+VG
Sbjct: 339 RNFHTVPYMVG 349
>ref|NP_001257.4| liver carboxylesterase 1 isoform c precursor [Homo sapiens].
Length = 566
Score = 535 bits (1378), Expect(2) = e-152
Identities = 264/346 (76%), Positives = 297/346 (85%), Gaps = 1/346 (0%)
Frame = +3
Query: 39 MWLLPLVLTSLASSATWAGQPASPPVVDTAQGRVLGKYVSLEGLAQPVAVFLGVPFAKPP 218
MWL +L +L++SA W G P+SPPVVDT G+VLGK+VSLEG AQPVA+FLG+PFAKPP
Sbjct: 1 MWLRAFILATLSASAAW-GHPSSPPVVDTVHGKVLGKFVSLEGFAQPVAIFLGIPFAKPP 59
Query: 219 LGSLRFAPPQPAEPWSFVKNTTSYPPMCCQEPIGGQMLSDLFTNRKERLIPEFSEDCLYL 398
LG LRF PPQPAEPWSFVKN TSYPPMC Q+P GQ+LS+LFTNRKE + + SEDCLYL
Sbjct: 60 LGPLRFTPPQPAEPWSFVKNATSYPPMCTQDPKAGQLLSELFTNRKENIPLKLSEDCLYL 119
Query: 399 NIYTPADLTKRGRLPVMVWIHGGGLVVGGASTYDGLALAAHENVVVVAIQYRLGIWGFFS 578
NIYTPADLTK+ RLPVMVWIHGGGL+VG ASTYDGLALAAHENVVVV IQYRLGIWGFFS
Sbjct: 120 NIYTPADLTKKNRLPVMVWIHGGGLMVGAASTYDGLALAAHENVVVVTIQYRLGIWGFFS 179
Query: 579 TGDEHSRGNWGHLDQVAALHWVQENIANFGGDPGSVTIFGESAGGESVSVLVLSPLAKNL 758
TGDEHSRGNWGHLDQVAAL WVQ+NIA+FGG+PGSVTIFGESAGGESVSVLVLSPLAKNL
Sbjct: 180 TGDEHSRGNWGHLDQVAALRWVQDNIASFGGNPGSVTIFGESAGGESVSVLVLSPLAKNL 239
Query: 759 FHRAISESGVAFTAGLVRK-DMKAAAKQIAVLAGW*NTTSAVFVHCLRQKSEDELLDLTL 935
FHRAISESGVA T+ LV+K D+K A+QIA+ AG TTSAV VHCLRQK+E+ELL+ TL
Sbjct: 240 FHRAISESGVALTSVLVKKGDVKPLAEQIAITAGCKTTTSAVMVHCLRQKTEEELLETTL 299
Query: 936 KMKFFALDLHGDPRESHPFLTTVVDEVLLPQMPEGDLAEKDFTLSP 1073
KMKF +LDL GDPRES P L TV+D +LL + PE AE++F P
Sbjct: 300 KMKFLSLDLQGDPRESQPLLGTVIDGMLLLKTPEELQAERNFHTVP 345
Score = 23.9 bits (50), Expect(2) = e-152
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = +2
Query: 1052 KGFHTVPYIVG 1084
+ FHTVPY+VG
Sbjct: 339 RNFHTVPYMVG 349
>ref|NP_003860.2| cocaine esterase isoform 1 [Homo sapiens].
Length = 623
Score = 304 bits (779), Expect = 8e-83
Identities = 167/330 (50%), Positives = 208/330 (63%), Gaps = 2/330 (0%)
Frame = +3
Query: 93 GQPASPPVVDTAQGRVLGKYVSLEGLAQPVAVFLGVPFAKPPLGSLRFAPPQPAEPWSFV 272
GQ ++ P+ T G+VLG V ++G V FLG+PFAKPPLG LRFAPP+P E WS V
Sbjct: 90 GQDSASPIRTTHTGQVLGSLVHVKGANAGVQTFLGIPFAKPPLGPLRFAPPEPPESWSGV 149
Query: 273 KNTTSYPPMCCQEPIGGQMLSDLFTNRKERLIPE--FSEDCLYLNIYTPADLTKRGRLPV 446
++ T++P MC Q+ + F ++ P SEDCLYL+IYTPA + LPV
Sbjct: 150 RDGTTHPAMCLQDLTA---VESEFLSQFNMTFPSDSMSEDCLYLSIYTPAHSHEGSNLPV 206
Query: 447 MVWIHGGGLVVGGASTYDGLALAAHENVVVVAIQYRLGIWGFFSTGDEHSRGNWGHLDQV 626
MVWIHGG LV G AS YDG LAA ENVVVV IQYRLG+ GFFSTGD+H+ GNWG+LDQV
Sbjct: 207 MVWIHGGALVFGMASLYDGSMLAALENVVVVIIQYRLGVLGFFSTGDKHATGNWGYLDQV 266
Query: 627 AALHWVQENIANFGGDPGSVTIFGESAGGESVSVLVLSPLAKNLFHRAISESGVAFTAGL 806
AAL WVQ+NIA+FGG+P VTIFGESAGG SVS LV+SP+++ LFH AI ESGVA GL
Sbjct: 267 AALRWVQQNIAHFGGNPDRVTIFGESAGGTSVSSLVVSPISQGLFHGAIMESGVALLPGL 326
Query: 807 VRKDMKAAAKQIAVLAGW*NTTSAVFVHCLRQKSEDELLDLTLKMKFFALDLHGDPRESH 986
+ + +A L+ S V CLR KS++E+L + K
Sbjct: 327 IASSADVISTVVANLSACDQVDSEALVGCLRGKSKEEILAINKPFK-------------- 372
Query: 987 PFLTTVVDEVLLPQMPEGDLAEKDFTLSPT 1076
+ VVD V LP+ P+ LA DF P+
Sbjct: 373 -MIPGVVDGVFLPRHPQELLASADFQPVPS 401
>ref|NP_932327.1| cocaine esterase isoform 2 [Homo sapiens].
Length = 607
Score = 304 bits (779), Expect = 8e-83
Identities = 167/330 (50%), Positives = 208/330 (63%), Gaps = 2/330 (0%)
Frame = +3
Query: 93 GQPASPPVVDTAQGRVLGKYVSLEGLAQPVAVFLGVPFAKPPLGSLRFAPPQPAEPWSFV 272
GQ ++ P+ T G+VLG V ++G V FLG+PFAKPPLG LRFAPP+P E WS V
Sbjct: 90 GQDSASPIRTTHTGQVLGSLVHVKGANAGVQTFLGIPFAKPPLGPLRFAPPEPPESWSGV 149
Query: 273 KNTTSYPPMCCQEPIGGQMLSDLFTNRKERLIPE--FSEDCLYLNIYTPADLTKRGRLPV 446
++ T++P MC Q+ + F ++ P SEDCLYL+IYTPA + LPV
Sbjct: 150 RDGTTHPAMCLQDLTA---VESEFLSQFNMTFPSDSMSEDCLYLSIYTPAHSHEGSNLPV 206
Query: 447 MVWIHGGGLVVGGASTYDGLALAAHENVVVVAIQYRLGIWGFFSTGDEHSRGNWGHLDQV 626
MVWIHGG LV G AS YDG LAA ENVVVV IQYRLG+ GFFSTGD+H+ GNWG+LDQV
Sbjct: 207 MVWIHGGALVFGMASLYDGSMLAALENVVVVIIQYRLGVLGFFSTGDKHATGNWGYLDQV 266
Query: 627 AALHWVQENIANFGGDPGSVTIFGESAGGESVSVLVLSPLAKNLFHRAISESGVAFTAGL 806
AAL WVQ+NIA+FGG+P VTIFGESAGG SVS LV+SP+++ LFH AI ESGVA GL
Sbjct: 267 AALRWVQQNIAHFGGNPDRVTIFGESAGGTSVSSLVVSPISQGLFHGAIMESGVALLPGL 326
Query: 807 VRKDMKAAAKQIAVLAGW*NTTSAVFVHCLRQKSEDELLDLTLKMKFFALDLHGDPRESH 986
+ + +A L+ S V CLR KS++E+L + K
Sbjct: 327 IASSADVISTVVANLSACDQVDSEALVGCLRGKSKEEILAINKPFK-------------- 372
Query: 987 PFLTTVVDEVLLPQMPEGDLAEKDFTLSPT 1076
+ VVD V LP+ P+ LA DF P+
Sbjct: 373 -MIPGVVDGVFLPRHPQELLASADFQPVPS 401
>ref|NP_776176.5| carboxylesterase 4A isoform 1 precursor [Homo sapiens].
Length = 468
Score = 303 bits (777), Expect = 1e-82
Identities = 163/333 (48%), Positives = 218/333 (65%), Gaps = 2/333 (0%)
Frame = +3
Query: 42 WLL--PLVLTSLASSATWAGQPASPPVVDTAQGRVLGKYVSLEGLAQPVAVFLGVPFAKP 215
W+L L L +A +A A P VV T G + GK + + P+ VFLGVPF++P
Sbjct: 3 WILCWSLTLCLMAQTALGALHTKRPQVV-TKYGTLQGKQMHVG--KTPIQVFLGVPFSRP 59
Query: 216 PLGSLRFAPPQPAEPWSFVKNTTSYPPMCCQEPIGGQMLSDLFTNRKERLIPEFSEDCLY 395
PLG LRFAPP+P EPW +++ T+YPP C QE GQ+ S + R+ FSEDCLY
Sbjct: 60 PLGILRFAPPEPPEPWKGIRDATTYPPGCLQES-WGQLASMYVSTRERYKWLRFSEDCLY 118
Query: 396 LNIYTPADLTKRGRLPVMVWIHGGGLVVGGASTYDGLALAAHENVVVVAIQYRLGIWGFF 575
LN+Y PA +LPVMVW GG +VG AS+Y+G LAA E VV+V +Q+RLGI+GF
Sbjct: 119 LNVYAPARAPGDPQLPVMVWFPGGAFIVGAASSYEGSDLAAREKVVLVFLQHRLGIFGFL 178
Query: 576 STGDEHSRGNWGHLDQVAALHWVQENIANFGGDPGSVTIFGESAGGESVSVLVLSPLAKN 755
ST D H+RGNWG LDQ+AAL WVQENIA FGGDPG+VT+FG+SAG S+S L++SPLA
Sbjct: 179 STDDSHARGNWGLLDQMAALRWVQENIAAFGGDPGNVTLFGQSAGAMSISGLMMSPLASG 238
Query: 756 LFHRAISESGVAFTAGLVRKDMKAAAKQIAVLAGW*NTTSAVFVHCLRQKSEDELLDLTL 935
LFHRAIS+SG A + + AK++A LAG + ++ + V+CLR S +++ ++
Sbjct: 239 LFHRAISQSGTALFRLFITSNPLKVAKKVAHLAGCNHNSTQILVNCLRALSGTKVMRVSN 298
Query: 936 KMKFFALDLHGDPRESHPFLTTVVDEVLLPQMP 1034
KM+F L+ DP E ++ VVD V++P P
Sbjct: 299 KMRFLQLNFQRDPEEIIWSMSPVVDGVVIPDDP 331
>ref|NP_001172106.1| carboxylesterase 3 isoform 2 precursor [Homo sapiens].
Length = 568
Score = 287 bits (735), Expect = 1e-77
Identities = 161/343 (46%), Positives = 213/343 (62%)
Frame = +3
Query: 45 LLPLVLTSLASSATWAGQPASPPVVDTAQGRVLGKYVSLEGLAQPVAVFLGVPFAKPPLG 224
L+ +V LA AT G + P VDT GRV G+ V ++G + V VFLG+PFA+PPLG
Sbjct: 12 LVGVVCLLLACPATATGPEVAQPEVDTTLGRVRGRQVGVKGTDRLVNVFLGIPFAQPPLG 71
Query: 225 SLRFAPPQPAEPWSFVKNTTSYPPMCCQEPIGGQMLSDLFTNRKERLIPEFSEDCLYLNI 404
RF+ P PA+PW V++ ++ PPMC Q+ M S F ++ I SEDCL LN+
Sbjct: 72 PDRFSAPHPAQPWEGVRDASTAPPMCLQDV--ESMNSSRFVLNGKQQIFSVSEDCLVLNV 129
Query: 405 YTPADLTKRGRLPVMVWIHGGGLVVGGASTYDGLALAAHENVVVVAIQYRLGIWGFFSTG 584
Y+PA++ PVMVW+HGG L+ G A++YDG ALAA+ +VVVV +QYRLG+ GFFSTG
Sbjct: 130 YSPAEVPAGSGRPVMVWVHGGALITGAATSYDGSALAAYGDVVVVTVQYRLGVLGFFSTG 189
Query: 585 DEHSRGNWGHLDQVAALHWVQENIANFGGDPGSVTIFGESAGGESVSVLVLSPLAKNLFH 764
DEH+ GN G LD VAAL WVQENIA FGGD VT+FG SAGG +S LVLSP+A LFH
Sbjct: 190 DEHAPGNQGFLDVVAALRWVQENIAPFGGDLNCVTVFGGSAGGSIISGLVLSPVAAGLFH 249
Query: 765 RAISESGVAFTAGLVRKDMKAAAKQIAVLAGW*NTTSAVFVHCLRQKSEDELLDLTLKMK 944
RAI++SGV T G++ A++IA +++ A V CL+QK +EL+ L+ K+K
Sbjct: 250 RAITQSGVITTPGIIDSHPWPLAQKIANTLACSSSSPAEMVQCLQQKEGEELV-LSKKLK 308
Query: 945 FFALDLHGDPRESHPFLTTVVDEVLLPQMPEGDLAEKDFTLSP 1073
+ VD + P+ P+ L EK F P
Sbjct: 309 -------------NTIYPLTVDGTVFPKSPKELLKEKPFHSVP 338
>ref|NP_079198.2| carboxylesterase 3 isoform 1 precursor [Homo sapiens].
Length = 571
Score = 287 bits (735), Expect = 1e-77
Identities = 161/343 (46%), Positives = 213/343 (62%)
Frame = +3
Query: 45 LLPLVLTSLASSATWAGQPASPPVVDTAQGRVLGKYVSLEGLAQPVAVFLGVPFAKPPLG 224
L+ +V LA AT G + P VDT GRV G+ V ++G + V VFLG+PFA+PPLG
Sbjct: 12 LVGVVCLLLACPATATGPEVAQPEVDTTLGRVRGRQVGVKGTDRLVNVFLGIPFAQPPLG 71
Query: 225 SLRFAPPQPAEPWSFVKNTTSYPPMCCQEPIGGQMLSDLFTNRKERLIPEFSEDCLYLNI 404
RF+ P PA+PW V++ ++ PPMC Q+ M S F ++ I SEDCL LN+
Sbjct: 72 PDRFSAPHPAQPWEGVRDASTAPPMCLQDV--ESMNSSRFVLNGKQQIFSVSEDCLVLNV 129
Query: 405 YTPADLTKRGRLPVMVWIHGGGLVVGGASTYDGLALAAHENVVVVAIQYRLGIWGFFSTG 584
Y+PA++ PVMVW+HGG L+ G A++YDG ALAA+ +VVVV +QYRLG+ GFFSTG
Sbjct: 130 YSPAEVPAGSGRPVMVWVHGGALITGAATSYDGSALAAYGDVVVVTVQYRLGVLGFFSTG 189
Query: 585 DEHSRGNWGHLDQVAALHWVQENIANFGGDPGSVTIFGESAGGESVSVLVLSPLAKNLFH 764
DEH+ GN G LD VAAL WVQENIA FGGD VT+FG SAGG +S LVLSP+A LFH
Sbjct: 190 DEHAPGNQGFLDVVAALRWVQENIAPFGGDLNCVTVFGGSAGGSIISGLVLSPVAAGLFH 249
Query: 765 RAISESGVAFTAGLVRKDMKAAAKQIAVLAGW*NTTSAVFVHCLRQKSEDELLDLTLKMK 944
RAI++SGV T G++ A++IA +++ A V CL+QK +EL+ L+ K+K
Sbjct: 250 RAITQSGVITTPGIIDSHPWPLAQKIANTLACSSSSPAEMVQCLQQKEGEELV-LSKKLK 308
Query: 945 FFALDLHGDPRESHPFLTTVVDEVLLPQMPEGDLAEKDFTLSP 1073
+ VD + P+ P+ L EK F P
Sbjct: 309 -------------NTIYPLTVDGTVFPKSPKELLKEKPFHSVP 338
>ref|NP_001137157.1| carboxylesterase 5A isoform 1 precursor [Homo sapiens].
Length = 575
Score = 275 bits (703), Expect = 5e-74
Identities = 165/352 (46%), Positives = 203/352 (57%), Gaps = 7/352 (1%)
Frame = +3
Query: 42 WLLP---LVLTSLASSATWAGQPASPPVVDTAQGRVLGKYVSLEGLAQPVAVFLGVPFAK 212
W+ P L+ +A G A P +T G + GK V++ G PV VFLGVPFA
Sbjct: 5 WVHPGQILIWAIWVLAAPTKGPSAEGPQRNTRLGWIQGKQVTVLGSPVPVNVFLGVPFAA 64
Query: 213 PPLGSLRFAPPQPAEPWSFVKNTTSYPPMCCQEPIGGQMLSDLFTNRKERLIPEF--SED 386
PPLGSLRF PQPA PW ++ TSYP +C Q +L D + P+F SED
Sbjct: 65 PPLGSLRFTNPQPASPWDNLREATSYPNLCLQN--SEWLLLDQHMLKVH--YPKFGVSED 120
Query: 387 CLYLNIYTPADLTKRGRLPVMVWIHGGGLVVGGASTYDGLALAAHENVVVVAIQYRLGIW 566
CLYLNIY PA +LPV+VW GG G AS +DG ALAA+E+V+VV +QYRLGI+
Sbjct: 121 CLYLNIYAPAHADTGSKLPVLVWFPGGAFKTGSASIFDGSALAAYEDVLVVVVQYRLGIF 180
Query: 567 GFFSTGDEHSRGNWGHLDQVAALHWVQENIANFGGDPGSVTIFGESAGGESVSVLVLSPL 746
GFF+T D+H+ GNW DQVAAL WVQ+NI FGGDP SVTIFGESAG SVS L+LSP+
Sbjct: 181 GFFTTWDQHAPGNWAFKDQVAALSWVQKNIEFFGGDPSSVTIFGESAGAISVSSLILSPM 240
Query: 747 AKNLFHRAISESGVAFTAGLVRKDMKAA--AKQIAVLAGW*NTTSAVFVHCLRQKSEDEL 920
AK LFH+AI ESGVA L D + + + +A G + S + CLR K EL
Sbjct: 241 AKGLFHKAIMESGVAIIPYLEAHDYEKSEDLQVVAHFCGNNASDSEALLRCLRTKPSKEL 300
Query: 921 LDLTLKMKFFALDLHGDPRESHPFLTTVVDEVLLPQMPEGDLAEKDFTLSPT 1076
L L+ K K F T VVD P P L++K F P+
Sbjct: 301 LTLSQKTKSF---------------TRVVDGAFFPNEPLDLLSQKAFKAIPS 337
>ref|NP_659461.1| carboxylesterase 5A isoform 2 precursor [Homo sapiens].
Length = 525
Score = 275 bits (703), Expect = 5e-74
Identities = 165/352 (46%), Positives = 203/352 (57%), Gaps = 7/352 (1%)
Frame = +3
Query: 42 WLLP---LVLTSLASSATWAGQPASPPVVDTAQGRVLGKYVSLEGLAQPVAVFLGVPFAK 212
W+ P L+ +A G A P +T G + GK V++ G PV VFLGVPFA
Sbjct: 5 WVHPGQILIWAIWVLAAPTKGPSAEGPQRNTRLGWIQGKQVTVLGSPVPVNVFLGVPFAA 64
Query: 213 PPLGSLRFAPPQPAEPWSFVKNTTSYPPMCCQEPIGGQMLSDLFTNRKERLIPEF--SED 386
PPLGSLRF PQPA PW ++ TSYP +C Q +L D + P+F SED
Sbjct: 65 PPLGSLRFTNPQPASPWDNLREATSYPNLCLQN--SEWLLLDQHMLKVH--YPKFGVSED 120
Query: 387 CLYLNIYTPADLTKRGRLPVMVWIHGGGLVVGGASTYDGLALAAHENVVVVAIQYRLGIW 566
CLYLNIY PA +LPV+VW GG G AS +DG ALAA+E+V+VV +QYRLGI+
Sbjct: 121 CLYLNIYAPAHADTGSKLPVLVWFPGGAFKTGSASIFDGSALAAYEDVLVVVVQYRLGIF 180
Query: 567 GFFSTGDEHSRGNWGHLDQVAALHWVQENIANFGGDPGSVTIFGESAGGESVSVLVLSPL 746
GFF+T D+H+ GNW DQVAAL WVQ+NI FGGDP SVTIFGESAG SVS L+LSP+
Sbjct: 181 GFFTTWDQHAPGNWAFKDQVAALSWVQKNIEFFGGDPSSVTIFGESAGAISVSSLILSPM 240
Query: 747 AKNLFHRAISESGVAFTAGLVRKDMKAA--AKQIAVLAGW*NTTSAVFVHCLRQKSEDEL 920
AK LFH+AI ESGVA L D + + + +A G + S + CLR K EL
Sbjct: 241 AKGLFHKAIMESGVAIIPYLEAHDYEKSEDLQVVAHFCGNNASDSEALLRCLRTKPSKEL 300
Query: 921 LDLTLKMKFFALDLHGDPRESHPFLTTVVDEVLLPQMPEGDLAEKDFTLSPT 1076
L L+ K K F T VVD P P L++K F P+
Sbjct: 301 LTLSQKTKSF---------------TRVVDGAFFPNEPLDLLSQKAFKAIPS 337
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 51,749,247
Number of extensions: 1684496
Number of successful extensions: 7950
Number of sequences better than 1.0e-05: 28
Number of HSP's gapped: 7802
Number of HSP's successfully gapped: 32
Length of query: 361
Length of database: 18,297,164
Length adjustment: 104
Effective length of query: 257
Effective length of database: 14,868,908
Effective search space: 3821309356
Effective search space used: 3821309356
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-000829
(1085 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_598421.1| liver carboxylesterase 22 precursor [Mus muscul... 546 e-156
Alignment gi|NP_444430.2| carboxylesterase 3 precursor [Mus musculus]. 540 e-153
Alignment gi|XP_134476.6| PREDICTED: liver carboxylesterase 22 [Mus muscu... 506 e-143
Alignment gi|XP_916004.3| PREDICTED: liver carboxylesterase 22 [Mus muscu... 506 e-143
Alignment gi|NP_067431.2| liver carboxylesterase 1 precursor [Mus musculu... 503 e-142
Alignment gi|NP_001013786.2| carboxylesterase 1-like [Mus musculus]. 502 e-142
Alignment gi|NP_659179.1| liver carboxylesterase B-1 [Mus musculus]. 496 e-141
Alignment gi|NP_001074841.1| carboxylesterase 1B [Mus musculus]. 451 e-127
Alignment gi|NP_031980.2| liver carboxylesterase N precursor [Mus musculu... 439 e-123
Alignment gi|NP_666325.2| carboxylesterase 4A [Mus musculus]. 310 2e-84
>ref|NP_598421.1| liver carboxylesterase 22 precursor [Mus musculus].
Length = 562
Score = 546 bits (1408), Expect(2) = e-156
Identities = 266/345 (77%), Positives = 298/345 (86%)
Frame = +3
Query: 39 MWLLPLVLTSLASSATWAGQPASPPVVDTAQGRVLGKYVSLEGLAQPVAVFLGVPFAKPP 218
M L L+L SLA+ AG P+SPP+VDT QG+VLGKY+SLEG QPVAVFLGVPFAKPP
Sbjct: 1 MCLSALILVSLAAFTAGAGHPSSPPMVDTVQGKVLGKYISLEGFTQPVAVFLGVPFAKPP 60
Query: 219 LGSLRFAPPQPAEPWSFVKNTTSYPPMCCQEPIGGQMLSDLFTNRKERLIPEFSEDCLYL 398
LGSLRFAPPQPAEPWS VKN TSYPPMC Q+P+ GQ+++DL TNRKE++ +FSEDCLYL
Sbjct: 61 LGSLRFAPPQPAEPWSSVKNATSYPPMCFQDPVTGQIVNDLLTNRKEKIPLQFSEDCLYL 120
Query: 399 NIYTPADLTKRGRLPVMVWIHGGGLVVGGASTYDGLALAAHENVVVVAIQYRLGIWGFFS 578
NIYTPADLTK RLPVMVWIHGGGLV+GGASTYDGL L+ HENVVVV IQYRLGIWGFFS
Sbjct: 121 NIYTPADLTKSDRLPVMVWIHGGGLVLGGASTYDGLVLSTHENVVVVVIQYRLGIWGFFS 180
Query: 579 TGDEHSRGNWGHLDQVAALHWVQENIANFGGDPGSVTIFGESAGGESVSVLVLSPLAKNL 758
TGDEHSRGNWGHLDQVAALHWVQ+NIA FGGDPGSVTIFGESAGGESVSVLVLSPLAKNL
Sbjct: 181 TGDEHSRGNWGHLDQVAALHWVQDNIAKFGGDPGSVTIFGESAGGESVSVLVLSPLAKNL 240
Query: 759 FHRAISESGVAFTAGLVRKDMKAAAKQIAVLAGW*NTTSAVFVHCLRQKSEDELLDLTLK 938
F RAISESGVA TAGLV+K+ + A++IAV++G NTTSA VHCLRQK+E+ELL TLK
Sbjct: 241 FQRAISESGVALTAGLVKKNTRPLAEKIAVISGCKNTTSAAMVHCLRQKTEEELLGTTLK 300
Query: 939 MKFFALDLHGDPRESHPFLTTVVDEVLLPQMPEGDLAEKDFTLSP 1073
+ F LDLHGD R+SHPF+ TV+D VLLP+MPE LAEK+F P
Sbjct: 301 LNLFKLDLHGDSRQSHPFVPTVLDGVLLPKMPEEILAEKNFNTVP 345
Score = 23.5 bits (49), Expect(2) = e-156
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +2
Query: 1052 KGFHTVPYIVG 1084
K F+TVPYIVG
Sbjct: 339 KNFNTVPYIVG 349
>ref|NP_444430.2| carboxylesterase 3 precursor [Mus musculus].
Length = 565
Score = 540 bits (1390), Expect = e-153
Identities = 265/345 (76%), Positives = 297/345 (86%)
Frame = +3
Query: 39 MWLLPLVLTSLASSATWAGQPASPPVVDTAQGRVLGKYVSLEGLAQPVAVFLGVPFAKPP 218
M L PL+ SLA+ W G P+SPPVV+T +G+VLGKYV+LEG QPVAVFLGVPFAKPP
Sbjct: 1 MGLYPLIWLSLAACTAW-GYPSSPPVVNTVKGKVLGKYVNLEGFTQPVAVFLGVPFAKPP 59
Query: 219 LGSLRFAPPQPAEPWSFVKNTTSYPPMCCQEPIGGQMLSDLFTNRKERLIPEFSEDCLYL 398
LGSLRFAPPQPAEPWSFVKNTTSYPPMC Q+ +GGQ+LS+LFTNRKE + +FSEDCLYL
Sbjct: 60 LGSLRFAPPQPAEPWSFVKNTTSYPPMCSQDAVGGQVLSELFTNRKENIPLQFSEDCLYL 119
Query: 399 NIYTPADLTKRGRLPVMVWIHGGGLVVGGASTYDGLALAAHENVVVVAIQYRLGIWGFFS 578
NIYTPADLTK RLPVMVWIHGGGLVVGGASTYDGLAL+AHENVVVV IQYRLGIWGFFS
Sbjct: 120 NIYTPADLTKNSRLPVMVWIHGGGLVVGGASTYDGLALSAHENVVVVTIQYRLGIWGFFS 179
Query: 579 TGDEHSRGNWGHLDQVAALHWVQENIANFGGDPGSVTIFGESAGGESVSVLVLSPLAKNL 758
TGDEHSRGNWGHLDQVAAL WVQ+NIANFGG+PGSVTIFGESAGG SVSVLVLSPLAKNL
Sbjct: 180 TGDEHSRGNWGHLDQVAALRWVQDNIANFGGNPGSVTIFGESAGGFSVSVLVLSPLAKNL 239
Query: 759 FHRAISESGVAFTAGLVRKDMKAAAKQIAVLAGW*NTTSAVFVHCLRQKSEDELLDLTLK 938
FHRAISESGV+ TA L+ D+K A +A L+G TTSAV VHCLRQK+EDELL+ +LK
Sbjct: 240 FHRAISESGVSLTAALITTDVKPIAGLVATLSGCKTTTSAVMVHCLRQKTEDELLETSLK 299
Query: 939 MKFFALDLHGDPRESHPFLTTVVDEVLLPQMPEGDLAEKDFTLSP 1073
+ F LDL G+P+ES+PFL TV+D V+LP+ PE LAEK F+ P
Sbjct: 300 LNLFKLDLLGNPKESYPFLPTVIDGVVLPKAPEEILAEKSFSTVP 344
>ref|XP_134476.6| PREDICTED: liver carboxylesterase 22 [Mus musculus].
Length = 562
Score = 506 bits (1302), Expect(2) = e-143
Identities = 247/346 (71%), Positives = 284/346 (82%), Gaps = 1/346 (0%)
Frame = +3
Query: 39 MWLLPLVLTSLASSATWAGQPASPPVVDTAQGRVLGKYVSLEGLAQPVAVFLGVPFAKPP 218
M L L+L SL++ A W G P+SPPVV+T G+VLGKY+SLEG QPVAVFLGVPFAKPP
Sbjct: 1 MCLYALILLSLSAMA-WGGYPSSPPVVNTTHGKVLGKYISLEGFTQPVAVFLGVPFAKPP 59
Query: 219 LGSLRFAPPQPAEPWSFVKNTTSYPPMCCQEPIGGQMLSDLFTNRKERLIPEFSEDCLYL 398
LGSLRFAPPQP EPWSFVKN TSYPPMC Q+ + GQM++DL N KE++ FSEDCLYL
Sbjct: 60 LGSLRFAPPQPPEPWSFVKNATSYPPMCSQDAVLGQMVNDLIINNKEKIRLRFSEDCLYL 119
Query: 399 NIYTPADLTKR-GRLPVMVWIHGGGLVVGGASTYDGLALAAHENVVVVAIQYRLGIWGFF 575
N+YTP DL K RLPVMVWIHGGGLVVGGAS YDG L+AHENVVVV IQYRL IWGFF
Sbjct: 120 NVYTPVDLMKNTNRLPVMVWIHGGGLVVGGASAYDGRTLSAHENVVVVTIQYRLAIWGFF 179
Query: 576 STGDEHSRGNWGHLDQVAALHWVQENIANFGGDPGSVTIFGESAGGESVSVLVLSPLAKN 755
STGDEHSRGNWGHLDQ+AALHW+Q+NIANFGGDPGSVTIFG+SAGGESVSVLVLSPLAKN
Sbjct: 180 STGDEHSRGNWGHLDQLAALHWIQDNIANFGGDPGSVTIFGQSAGGESVSVLVLSPLAKN 239
Query: 756 LFHRAISESGVAFTAGLVRKDMKAAAKQIAVLAGW*NTTSAVFVHCLRQKSEDELLDLTL 935
LFHRAIS+SGV FT+GL +D + +QIAV AG TTSAV VHCLRQK+E+ELL++
Sbjct: 240 LFHRAISQSGVVFTSGLFMEDASSVTEQIAVTAGCKTTTSAVIVHCLRQKTEEELLEIMQ 299
Query: 936 KMKFFALDLHGDPRESHPFLTTVVDEVLLPQMPEGDLAEKDFTLSP 1073
KM F LD + ++++PFL TV+D V+LP+ PE LAEK+F P
Sbjct: 300 KMNLFKLDAQENTKKNYPFLPTVLDGVVLPKAPEAILAEKNFNTVP 345
Score = 23.5 bits (49), Expect(2) = e-143
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +2
Query: 1052 KGFHTVPYIVG 1084
K F+TVPYIVG
Sbjct: 339 KNFNTVPYIVG 349
>ref|XP_916004.3| PREDICTED: liver carboxylesterase 22 [Mus musculus].
Length = 562
Score = 506 bits (1302), Expect(2) = e-143
Identities = 247/346 (71%), Positives = 284/346 (82%), Gaps = 1/346 (0%)
Frame = +3
Query: 39 MWLLPLVLTSLASSATWAGQPASPPVVDTAQGRVLGKYVSLEGLAQPVAVFLGVPFAKPP 218
M L L+L SL++ A W G P+SPPVV+T G+VLGKY+SLEG QPVAVFLGVPFAKPP
Sbjct: 1 MCLYALILLSLSAMA-WGGYPSSPPVVNTTHGKVLGKYISLEGFTQPVAVFLGVPFAKPP 59
Query: 219 LGSLRFAPPQPAEPWSFVKNTTSYPPMCCQEPIGGQMLSDLFTNRKERLIPEFSEDCLYL 398
LGSLRFAPPQP EPWSFVKN TSYPPMC Q+ + GQM++DL N KE++ FSEDCLYL
Sbjct: 60 LGSLRFAPPQPPEPWSFVKNATSYPPMCSQDAVLGQMVNDLIINNKEKIRLRFSEDCLYL 119
Query: 399 NIYTPADLTKR-GRLPVMVWIHGGGLVVGGASTYDGLALAAHENVVVVAIQYRLGIWGFF 575
N+YTP DL K RLPVMVWIHGGGLVVGGAS YDG L+AHENVVVV IQYRL IWGFF
Sbjct: 120 NVYTPVDLMKNTNRLPVMVWIHGGGLVVGGASAYDGRTLSAHENVVVVTIQYRLAIWGFF 179
Query: 576 STGDEHSRGNWGHLDQVAALHWVQENIANFGGDPGSVTIFGESAGGESVSVLVLSPLAKN 755
STGDEHSRGNWGHLDQ+AALHW+Q+NIANFGGDPGSVTIFG+SAGGESVSVLVLSPLAKN
Sbjct: 180 STGDEHSRGNWGHLDQLAALHWIQDNIANFGGDPGSVTIFGQSAGGESVSVLVLSPLAKN 239
Query: 756 LFHRAISESGVAFTAGLVRKDMKAAAKQIAVLAGW*NTTSAVFVHCLRQKSEDELLDLTL 935
LFHRAIS+SGV FT+GL +D + +QIAV AG TTSAV VHCLRQK+E+ELL++
Sbjct: 240 LFHRAISQSGVVFTSGLFMEDASSVTEQIAVTAGCKTTTSAVIVHCLRQKTEEELLEIMQ 299
Query: 936 KMKFFALDLHGDPRESHPFLTTVVDEVLLPQMPEGDLAEKDFTLSP 1073
KM F LD + ++++PFL TV+D V+LP+ PE LAEK+F P
Sbjct: 300 KMNLFKLDAQENTKKNYPFLPTVLDGVVLPKAPEAILAEKNFNTVP 345
Score = 23.5 bits (49), Expect(2) = e-143
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +2
Query: 1052 KGFHTVPYIVG 1084
K F+TVPYIVG
Sbjct: 339 KNFNTVPYIVG 349
>ref|NP_067431.2| liver carboxylesterase 1 precursor [Mus musculus].
Length = 565
Score = 503 bits (1295), Expect = e-142
Identities = 249/345 (72%), Positives = 283/345 (82%)
Frame = +3
Query: 39 MWLLPLVLTSLASSATWAGQPASPPVVDTAQGRVLGKYVSLEGLAQPVAVFLGVPFAKPP 218
MWL L L SL + + G P+ PPVV T G+VLGKYV+LEG +QPVAVFLGVPFAKPP
Sbjct: 1 MWLCALSLISLTACLS-LGHPSLPPVVHTVHGKVLGKYVTLEGFSQPVAVFLGVPFAKPP 59
Query: 219 LGSLRFAPPQPAEPWSFVKNTTSYPPMCCQEPIGGQMLSDLFTNRKERLIPEFSEDCLYL 398
LGSLRFAPP+PAEPWSFVK+TTSYPP+C Q P L++LFTN+++ + +FSEDCLYL
Sbjct: 60 LGSLRFAPPEPAEPWSFVKHTTSYPPLCYQNPEAALRLAELFTNQRKIIPHKFSEDCLYL 119
Query: 399 NIYTPADLTKRGRLPVMVWIHGGGLVVGGASTYDGLALAAHENVVVVAIQYRLGIWGFFS 578
NIYTPADLT+ RLPVMVWIHGGGLV+ GASTYDG+ LA HENVVVV IQYRLGIWGFFS
Sbjct: 120 NIYTPADLTQNSRLPVMVWIHGGGLVIDGASTYDGVPLAVHENVVVVVIQYRLGIWGFFS 179
Query: 579 TGDEHSRGNWGHLDQVAALHWVQENIANFGGDPGSVTIFGESAGGESVSVLVLSPLAKNL 758
T DEHSRGNWGHLDQVAALHWVQ+NIANFGG+PGSVTIFGESAGGESVSVLVLSPLAKNL
Sbjct: 180 TEDEHSRGNWGHLDQVAALHWVQDNIANFGGNPGSVTIFGESAGGESVSVLVLSPLAKNL 239
Query: 759 FHRAISESGVAFTAGLVRKDMKAAAKQIAVLAGW*NTTSAVFVHCLRQKSEDELLDLTLK 938
FHRAI++S V F L + + AK+IA LAG TTSA VHCLRQK+EDELL+++LK
Sbjct: 240 FHRAIAQSSVIFNPCLFGRAARPLAKKIAALAGCKTTTSAAMVHCLRQKTEDELLEVSLK 299
Query: 939 MKFFALDLHGDPRESHPFLTTVVDEVLLPQMPEGDLAEKDFTLSP 1073
MKF +D GDPRES+PFL TV+D VLLP+ PE LAEK F P
Sbjct: 300 MKFGTVDFLGDPRESYPFLPTVIDGVLLPKAPEEILAEKSFNTVP 344
>ref|NP_001013786.2| carboxylesterase 1-like [Mus musculus].
Length = 563
Score = 502 bits (1293), Expect(2) = e-142
Identities = 251/345 (72%), Positives = 282/345 (81%)
Frame = +3
Query: 39 MWLLPLVLTSLASSATWAGQPASPPVVDTAQGRVLGKYVSLEGLAQPVAVFLGVPFAKPP 218
MWL L L SL ++ G +SPPVVDT QG+V+GKY+SLEG AQPVAVFLGVPFAKPP
Sbjct: 1 MWLFALALASL-NTCMALGHLSSPPVVDTLQGKVMGKYISLEGSAQPVAVFLGVPFAKPP 59
Query: 219 LGSLRFAPPQPAEPWSFVKNTTSYPPMCCQEPIGGQMLSDLFTNRKERLIPEFSEDCLYL 398
LG LRFAPPQPAE WS VKNTTSYPPMC Q G +LSD+FTN+ E + E+SEDCLYL
Sbjct: 60 LGPLRFAPPQPAETWSSVKNTTSYPPMCSQITGVGPVLSDVFTNQLENVPLEYSEDCLYL 119
Query: 399 NIYTPADLTKRGRLPVMVWIHGGGLVVGGASTYDGLALAAHENVVVVAIQYRLGIWGFFS 578
NIY+P DLT + RLPVMVW+HGGGL+ GGAST+DGLAL+ HENVV+V IQYRLGIWGF S
Sbjct: 120 NIYSPTDLTSKDRLPVMVWVHGGGLLSGGASTFDGLALSTHENVVIVVIQYRLGIWGFLS 179
Query: 579 TGDEHSRGNWGHLDQVAALHWVQENIANFGGDPGSVTIFGESAGGESVSVLVLSPLAKNL 758
TGDEHSRGNWGHLDQVAAL WVQ NIANFGGDP SVT+FGESAGGESVSVLVLSPL KNL
Sbjct: 180 TGDEHSRGNWGHLDQVAALQWVQNNIANFGGDPSSVTLFGESAGGESVSVLVLSPLTKNL 239
Query: 759 FHRAISESGVAFTAGLVRKDMKAAAKQIAVLAGW*NTTSAVFVHCLRQKSEDELLDLTLK 938
F RAISESGVA T L R+ + AA+Q+A+ G TTSA VHCLR+K+E+ELL TLK
Sbjct: 240 FQRAISESGVALTPCLFRETTRRAAEQVAIATGCVATTSADIVHCLREKTEEELLATTLK 299
Query: 939 MKFFALDLHGDPRESHPFLTTVVDEVLLPQMPEGDLAEKDFTLSP 1073
MKFFALDL GDPRES+PFLTTV+D V+LP+ PE LAEK F P
Sbjct: 300 MKFFALDLLGDPRESYPFLTTVIDGVVLPKAPEEILAEKSFNTVP 344
Score = 23.5 bits (49), Expect(2) = e-142
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +2
Query: 1052 KGFHTVPYIVG 1084
K F+TVPYIVG
Sbjct: 338 KSFNTVPYIVG 348
>ref|NP_659179.1| liver carboxylesterase B-1 [Mus musculus].
Length = 561
Score = 496 bits (1277), Expect(2) = e-141
Identities = 242/345 (70%), Positives = 286/345 (82%)
Frame = +3
Query: 39 MWLLPLVLTSLASSATWAGQPASPPVVDTAQGRVLGKYVSLEGLAQPVAVFLGVPFAKPP 218
M+L L L SLA+ G P+SPPVVDTA G+VLGK+V++EG +QPVAVFLG+PFAKPP
Sbjct: 1 MFLSTLFLVSLATCVI-CGNPSSPPVVDTAHGKVLGKHVNVEGFSQPVAVFLGIPFAKPP 59
Query: 219 LGSLRFAPPQPAEPWSFVKNTTSYPPMCCQEPIGGQMLSDLFTNRKERLIPEFSEDCLYL 398
LGSLRFAPPQPAEPWS VKN T+YPPMC Q+ GQ ++DL TNRKE++ EFSEDCLYL
Sbjct: 60 LGSLRFAPPQPAEPWSSVKNATTYPPMCSQDAARGQAVNDLITNRKEKIHLEFSEDCLYL 119
Query: 399 NIYTPADLTKRGRLPVMVWIHGGGLVVGGASTYDGLALAAHENVVVVAIQYRLGIWGFFS 578
NIYTPAD +K RLPVMVWIHGGGL +GGAS++DG AL+A+ENVVVVAIQYRL IWGFFS
Sbjct: 120 NIYTPADFSKNSRLPVMVWIHGGGLKLGGASSFDGRALSAYENVVVVAIQYRLSIWGFFS 179
Query: 579 TGDEHSRGNWGHLDQVAALHWVQENIANFGGDPGSVTIFGESAGGESVSVLVLSPLAKNL 758
TGDEHSRGNWGHLDQVAALHWVQ+NIANFGGDPGSVTIFGESAGG SVS+L+LSPL+KNL
Sbjct: 180 TGDEHSRGNWGHLDQVAALHWVQDNIANFGGDPGSVTIFGESAGGYSVSILILSPLSKNL 239
Query: 759 FHRAISESGVAFTAGLVRKDMKAAAKQIAVLAGW*NTTSAVFVHCLRQKSEDELLDLTLK 938
FHRAISESGVAF G+ KD++ +QIAV AG TTSAV VHC+RQK+E+ELL++ K
Sbjct: 240 FHRAISESGVAFIPGMFTKDVRPITEQIAVTAGCKTTTSAVIVHCMRQKTEEELLEIMHK 299
Query: 939 MKFFALDLHGDPRESHPFLTTVVDEVLLPQMPEGDLAEKDFTLSP 1073
+ + L L GD + S F+T+V+D V+LP+ P+ LAEK+F P
Sbjct: 300 LNLYKLSLQGDTKNSDQFVTSVLDGVVLPKDPKEILAEKNFNTVP 344
Score = 23.5 bits (49), Expect(2) = e-141
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +2
Query: 1052 KGFHTVPYIVG 1084
K F+TVPYIVG
Sbjct: 338 KNFNTVPYIVG 348
>ref|NP_001074841.1| carboxylesterase 1B [Mus musculus].
Length = 567
Score = 451 bits (1160), Expect = e-127
Identities = 224/347 (64%), Positives = 269/347 (77%), Gaps = 2/347 (0%)
Frame = +3
Query: 39 MWLLPLVLTSLASSATWAGQPASPPVVDTAQGRVLGKYVSLEGLAQPVAVFLGVPFAKPP 218
MWL LV SLA W P+SP VVDT QG++LGKY SLEG PVAVFLGVPFAKPP
Sbjct: 1 MWLHALVWASLALCPIWGHSPSSP-VVDTTQGKILGKYTSLEGFEHPVAVFLGVPFAKPP 59
Query: 219 LGSLRFAPPQPAEPWSFVKNTTSYPPMCCQEPIGGQMLSDLFTNRKERLIPEFSEDCLYL 398
LGSLRFAPP+PAEPWSFVKN TSYPPMC Q+ + Q+LSD+ + +KE + P FSEDCLYL
Sbjct: 60 LGSLRFAPPEPAEPWSFVKNATSYPPMCSQDAVAVQLLSDMLSTKKESIPPLFSEDCLYL 119
Query: 399 NIYTPADLTKRGRLPVMVWIHGGGLVVGGASTYDGLALAAHENVVVVAIQYRLGIWGFFS 578
NIY+PADLTK LPVMVWIHGGGL+ GGAS Y+GLAL+AHENVVVV IQYRLGIWG FS
Sbjct: 120 NIYSPADLTKSSLLPVMVWIHGGGLMTGGASLYNGLALSAHENVVVVTIQYRLGIWGLFS 179
Query: 579 TGDEHSRGNWGHLDQVAALHWVQENIANFGGDPGSVTIFGESAGGESVSVLVLSPLAKNL 758
TGDEHSRGNW HLDQ+AAL WVQ+NIANFGG+P SVT+FG SAGG SVSVLVLSPLAKNL
Sbjct: 180 TGDEHSRGNWAHLDQLAALRWVQDNIANFGGNPDSVTVFGSSAGGVSVSVLVLSPLAKNL 239
Query: 759 FHRAISESGVAFTAGLVRKDMKAA--AKQIAVLAGW*NTTSAVFVHCLRQKSEDELLDLT 932
FHRAISES V ++ D+ A ++ IA ++G +T+S V CLRQK+E+ELL++T
Sbjct: 240 FHRAISESSVVLENIVITLDLVACDLSQMIATVSGCNDTSSTAMVQCLRQKTENELLEIT 299
Query: 933 LKMKFFALDLHGDPRESHPFLTTVVDEVLLPQMPEGDLAEKDFTLSP 1073
+K++ + ++ + ++TV+D V+LP+ PE LAEK F+ P
Sbjct: 300 VKLEVTKVGGAASAKKDNTSMSTVIDGVVLPKAPEEILAEKSFSTVP 346
>ref|NP_031980.2| liver carboxylesterase N precursor [Mus musculus].
Length = 554
Score = 439 bits (1128), Expect(2) = e-123
Identities = 225/345 (65%), Positives = 264/345 (76%)
Frame = +3
Query: 39 MWLLPLVLTSLASSATWAGQPASPPVVDTAQGRVLGKYVSLEGLAQPVAVFLGVPFAKPP 218
MWL LV SLA G PPVVDT QG+VLGKY+SLEG QPVAVFLGVPFAKPP
Sbjct: 1 MWLHALVWASLAVCPI-LGHSLLPPVVDTTQGKVLGKYISLEGFEQPVAVFLGVPFAKPP 59
Query: 219 LGSLRFAPPQPAEPWSFVKNTTSYPPMCCQEPIGGQMLSDLFTNRKERLIPEFSEDCLYL 398
LGSLRFAPPQPAEPWSFVKN TSYPPMC Q+ ++LSD+F+ KE L + SEDCLYL
Sbjct: 60 LGSLRFAPPQPAEPWSFVKNATSYPPMCSQDAGWAKILSDMFSTEKEILPLKISEDCLYL 119
Query: 399 NIYTPADLTKRGRLPVMVWIHGGGLVVGGASTYDGLALAAHENVVVVAIQYRLGIWGFFS 578
NIY+PADLTK +LPVMVWIHGGGLV+GGAS Y+GLAL+AHENVVVV IQYRLGIWG FS
Sbjct: 120 NIYSPADLTKSSQLPVMVWIHGGGLVIGGASPYNGLALSAHENVVVVTIQYRLGIWGLFS 179
Query: 579 TGDEHSRGNWGHLDQVAALHWVQENIANFGGDPGSVTIFGESAGGESVSVLVLSPLAKNL 758
TGDEHS GNW HLDQ+AAL WVQ+NIANFGG+P SVTIFGES+GG SVSVLVLSPL K+L
Sbjct: 180 TGDEHSPGNWAHLDQLAALRWVQDNIANFGGNPDSVTIFGESSGGISVSVLVLSPLGKDL 239
Query: 759 FHRAISESGVAFTAGLVRKDMKAAAKQIAVLAGW*NTTSAVFVHCLRQKSEDELLDLTLK 938
FHRAISESGV + +K+++A + IA L+ +T+SA V CLRQK+E ELL+++ K
Sbjct: 240 FHRAISESGVVINTNVGKKNIQAVNEIIATLSQCNDTSSAAMVQCLRQKTESELLEISGK 299
Query: 939 MKFFALDLHGDPRESHPFLTTVVDEVLLPQMPEGDLAEKDFTLSP 1073
+ + + L+T++D V+LP+ PE LAEK F P
Sbjct: 300 LVQYNIS-----------LSTMIDGVVLPKAPEEILAEKSFNTVP 333
Score = 23.5 bits (49), Expect(2) = e-123
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +2
Query: 1052 KGFHTVPYIVG 1084
K F+TVPYIVG
Sbjct: 327 KSFNTVPYIVG 337
>ref|NP_666325.2| carboxylesterase 4A [Mus musculus].
Length = 563
Score = 310 bits (793), Expect = 2e-84
Identities = 166/332 (50%), Positives = 215/332 (64%), Gaps = 1/332 (0%)
Frame = +3
Query: 42 WLLPLVLTSLASSATWAGQ-PASPPVVDTAQGRVLGKYVSLEGLAQPVAVFLGVPFAKPP 218
W+L L LT T G P++ T G + GK V + P+ VFLG+PF+KPP
Sbjct: 10 WILGLSLTLCLVVQTALGALHTKEPLLITKHGILQGKQVHVGDT--PIQVFLGIPFSKPP 67
Query: 219 LGSLRFAPPQPAEPWSFVKNTTSYPPMCCQEPIGGQMLSDLFTNRKERLIPEFSEDCLYL 398
+G+ RFAPP+P PW+ +++ T+YPP C QE GQ+LS RK+ FSEDCLYL
Sbjct: 68 VGTRRFAPPEPPLPWNGIRDATTYPPSCLQES-WGQILSMYLNTRKQYKWLHFSEDCLYL 126
Query: 399 NIYTPADLTKRGRLPVMVWIHGGGLVVGGASTYDGLALAAHENVVVVAIQYRLGIWGFFS 578
N+Y P LPVMVW GG + G ASTY+G LAA VV+V +QYRLGI GFFS
Sbjct: 127 NVYAPVLAPGAPLLPVMVWFPGGAFLAGSASTYEGSELAARGKVVLVFLQYRLGILGFFS 186
Query: 579 TGDEHSRGNWGHLDQVAALHWVQENIANFGGDPGSVTIFGESAGGESVSVLVLSPLAKNL 758
TG+ H+RGNWG LDQ+AAL WVQENI FGGDP SVT+FG+SAG SVS L++SPLA+ L
Sbjct: 187 TGNSHARGNWGLLDQIAALRWVQENIEAFGGDPDSVTLFGQSAGAMSVSGLMVSPLAQGL 246
Query: 759 FHRAISESGVAFTAGLVRKDMKAAAKQIAVLAGW*NTTSAVFVHCLRQKSEDELLDLTLK 938
FH+AIS+SG A + D +AK+IA LAG + ++ V V CLR S +E+ ++ +
Sbjct: 247 FHQAISQSGTAVLKAFITPDPLTSAKKIAHLAGCDHNSTKVMVECLRSLSAEEVTLVSKR 306
Query: 939 MKFFALDLHGDPRESHPFLTTVVDEVLLPQMP 1034
M FF + H DP+E FL+ VVD V+ P+ P
Sbjct: 307 MSFFQANSHKDPKEIVWFLSPVVDGVVFPEDP 338
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 43,523,865
Number of extensions: 1392334
Number of successful extensions: 6160
Number of sequences better than 1.0e-05: 35
Number of HSP's gapped: 6036
Number of HSP's successfully gapped: 41
Length of query: 361
Length of database: 15,617,559
Length adjustment: 103
Effective length of query: 258
Effective length of database: 12,523,851
Effective search space: 3231153558
Effective search space used: 3231153558
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-000829
(1085 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_999411.1| liver carboxylesterase [Sus scrofa]. 647 0.0
Alignment gi|NP_001230554.1| carboxylesterase 3 [Sus scrofa]. 285 3e-77
Alignment gi|XP_003135217.1| PREDICTED: neuroligin-3 isoform 2 [Sus scrof... 225 4e-59
Alignment gi|XP_001927846.1| PREDICTED: neuroligin-3 isoform 1 [Sus scrof... 217 8e-57
Alignment gi|XP_003135218.1| PREDICTED: neuroligin-3 isoform 3 [Sus scrof... 211 7e-55
Alignment gi|XP_003354529.1| PREDICTED: acetylcholinesterase-like [Sus sc... 195 4e-50
Alignment gi|XP_003358712.1| PREDICTED: cholinesterase-like [Sus scrofa]. 184 1e-46
Alignment gi|XP_003353742.1| PREDICTED: bile salt-activated lipase [Sus s... 164 6e-41
Alignment gi|XP_003360403.1| PREDICTED: neuroligin-3 [Sus scrofa]. 160 1e-39
Alignment gi|XP_003358309.1| PREDICTED: neuroligin-2, partial [Sus scrofa]. 156 2e-38
>ref|NP_999411.1| liver carboxylesterase [Sus scrofa].
Length = 565
Score = 647 bits (1669), Expect = 0.0
Identities = 323/345 (93%), Positives = 327/345 (94%)
Frame = +3
Query: 39 MWLLPLVLTSLASSATWAGQPASPPVVDTAQGRVLGKYVSLEGLAQPVAVFLGVPFAKPP 218
MWLLPLVLTSLASSATW GQPASPPVVDTAQGRVLGKYVSLEGLAQPVAVFLGVPFAKPP
Sbjct: 1 MWLLPLVLTSLASSATW-GQPASPPVVDTAQGRVLGKYVSLEGLAQPVAVFLGVPFAKPP 59
Query: 219 LGSLRFAPPQPAEPWSFVKNTTSYPPMCCQEPIGGQMLSDLFTNRKERLIPEFSEDCLYL 398
LGSLRFAPPQPAEPWSFVKNTTSYPPMCCQ+P+ GQM SDLFTN KERLIPEFSEDCLYL
Sbjct: 60 LGSLRFAPPQPAEPWSFVKNTTSYPPMCCQDPVAGQMTSDLFTNGKERLIPEFSEDCLYL 119
Query: 399 NIYTPADLTKRGRLPVMVWIHGGGLVVGGASTYDGLALAAHENVVVVAIQYRLGIWGFFS 578
NIYTPADLT+RGRLPVMVWIHGGGLVVGGASTYDGLALAAHENVVVVAIQYRLGIWGFFS
Sbjct: 120 NIYTPADLTRRGRLPVMVWIHGGGLVVGGASTYDGLALAAHENVVVVAIQYRLGIWGFFS 179
Query: 579 TGDEHSRGNWGHLDQVAALHWVQENIANFGGDPGSVTIFGESAGGESVSVLVLSPLAKNL 758
TGDEHSRGNWGHLDQVAALHWVQENIANFGGD GSVTIFGESAGGESVSVLVLSPLAKNL
Sbjct: 180 TGDEHSRGNWGHLDQVAALHWVQENIANFGGDTGSVTIFGESAGGESVSVLVLSPLAKNL 239
Query: 759 FHRAISESGVAFTAGLVRKDMKAAAKQIAVLAGW*NTTSAVFVHCLRQKSEDELLDLTLK 938
FHRAISESGVA TAGLVRKDMKAAAKQIAVLAG TTSAVFVHCLRQKSEDELLDLTLK
Sbjct: 240 FHRAISESGVALTAGLVRKDMKAAAKQIAVLAGCKTTTSAVFVHCLRQKSEDELLDLTLK 299
Query: 939 MKFFALDLHGDPRESHPFLTTVVDEVLLPQMPEGDLAEKDFTLSP 1073
MKF LDLHGDPRESHPFL TVVD VLLP+MPE LAEKDF P
Sbjct: 300 MKFLTLDLHGDPRESHPFLPTVVDGVLLPKMPEEILAEKDFNTVP 344
>ref|NP_001230554.1| carboxylesterase 3 [Sus scrofa].
Length = 570
Score = 285 bits (729), Expect = 3e-77
Identities = 162/335 (48%), Positives = 211/335 (62%)
Frame = +3
Query: 69 LASSATWAGQPASPPVVDTAQGRVLGKYVSLEGLAQPVAVFLGVPFAKPPLGSLRFAPPQ 248
+A SA G+ A+ P VDT GRV G+ V ++G + V VFLG+PFA+PPLG RF+ P+
Sbjct: 20 VALSAAVTGREATQPEVDTTLGRVRGRQVGVKGTDRLVNVFLGIPFAQPPLGPGRFSAPR 79
Query: 249 PAEPWSFVKNTTSYPPMCCQEPIGGQMLSDLFTNRKERLIPEFSEDCLYLNIYTPADLTK 428
PA+ W V++ ++ P MC Q+ + + + K ++ P SEDCL LNIY+PA+ T
Sbjct: 80 PAQSWEGVRDASTAPAMCPQD-LERMNNARFVLDGKHQIFP-VSEDCLVLNIYSPAEATT 137
Query: 429 RGRLPVMVWIHGGGLVVGGASTYDGLALAAHENVVVVAIQYRLGIWGFFSTGDEHSRGNW 608
PVMVW HGG LVVG A+++DG ALAA+ +VVVV +QYRLG+ GFFSTGD+H+ GNW
Sbjct: 138 GAGRPVMVWFHGGSLVVGAATSHDGSALAAYGDVVVVTVQYRLGLLGFFSTGDKHAPGNW 197
Query: 609 GHLDQVAALHWVQENIANFGGDPGSVTIFGESAGGESVSVLVLSPLAKNLFHRAISESGV 788
G LD VAAL WVQENI+ FGGD SVT+FG SAG VS LVLSPLA LFHRAI+ESGV
Sbjct: 198 GFLDAVAALRWVQENISPFGGDFNSVTVFGSSAGASIVSALVLSPLAAGLFHRAIAESGV 257
Query: 789 AFTAGLVRKDMKAAAKQIAVLAGW*NTTSAVFVHCLRQKSEDELLDLTLKMKFFALDLHG 968
GL+ + A+ A +T+SA + CLRQK+ +E+L L K+K A
Sbjct: 258 ITLPGLLDSNPWPLAQSFADSLACPSTSSAEMLQCLRQKAVEEIL-LDKKLKTIA----- 311
Query: 969 DPRESHPFLTTVVDEVLLPQMPEGDLAEKDFTLSP 1073
+ VD P+ P+ L EK F P
Sbjct: 312 ---------SYTVDGTFFPKTPKELLREKQFHSVP 337
>ref|XP_003135217.1| PREDICTED: neuroligin-3 isoform 2 [Sus scrofa].
Length = 808
Score = 225 bits (573), Expect = 4e-59
Identities = 135/350 (38%), Positives = 189/350 (54%), Gaps = 9/350 (2%)
Frame = +3
Query: 39 MWLLPLVLTSLASSATWAGQPASPPVVDTAQGRVLGKYVSLEG-LAQPVAVFLGVPFAKP 215
+W L LVL A A P V+T G++ G V L + PV +LGVP+A P
Sbjct: 26 LWFLSLVLR--------ASTQAPAPTVNTHFGKLRGARVPLPSEILGPVDQYLGVPYAAP 77
Query: 216 PLGSLRFAPPQPAEPWSFVKNTTSYPPMCCQE---PIGGQMLSDLFTNRKERL---IPEF 377
P+G RF PP+P WS ++N T +PP+C Q + ML FT + + I E
Sbjct: 78 PIGEKRFLPPEPPPSWSGIRNATHFPPVCPQNIHTAVPEVMLPVWFTANLDIVATYIQEP 137
Query: 378 SEDCLYLNIYTPA--DLTKRGRLPVMVWIHGGGLVVGGASTYDGLALAAHENVVVVAIQY 551
+EDCLYLN+Y P D+ G PVMV+IHGG + G + DG LA++ NV+V+ + Y
Sbjct: 138 NEDCLYLNVYVPTEDDIRDSGAKPVMVYIHGGSYMEGTGNMIDGSVLASYGNVIVITLNY 197
Query: 552 RLGIWGFFSTGDEHSRGNWGHLDQVAALHWVQENIANFGGDPGSVTIFGESAGGESVSVL 731
R+G+ GF STGD+ ++GN+G LDQ+ AL WV ENIA FGGDP +T+FG G VS+L
Sbjct: 198 RVGVLGFLSTGDQAAKGNYGLLDQIQALRWVSENIAFFGGDPRRITVFGSGIGASCVSLL 257
Query: 732 VLSPLAKNLFHRAISESGVAFTAGLVRKDMKAAAKQIAVLAGW*NTTSAVFVHCLRQKSE 911
LS ++ LF RAI +SG A ++ V +A G + V CLRQKS
Sbjct: 258 TLSHHSEGLFQRAIIQSGSALSSWAVNYQPVKYTSLLADKVGCNVLDTVDMVDCLRQKSA 317
Query: 912 DELLDLTLKMKFFALDLHGDPRESHPFLTTVVDEVLLPQMPEGDLAEKDF 1061
EL++ ++ P H V+D ++P PE + + +F
Sbjct: 318 KELVEQDIQ-----------PARYHVAFGPVIDGDVIPDDPEILMEQGEF 356
>ref|XP_001927846.1| PREDICTED: neuroligin-3 isoform 1 [Sus scrofa].
Length = 828
Score = 217 bits (553), Expect = 8e-57
Identities = 135/370 (36%), Positives = 189/370 (51%), Gaps = 29/370 (7%)
Frame = +3
Query: 39 MWLLPLVLTSLASSATWAGQPASPPVVDTAQGRVLGKYVSLEG-LAQPVAVFLGVPFAKP 215
+W L LVL A A P V+T G++ G V L + PV +LGVP+A P
Sbjct: 26 LWFLSLVLR--------ASTQAPAPTVNTHFGKLRGARVPLPSEILGPVDQYLGVPYAAP 77
Query: 216 PLGSLRFAPPQPAEPWSFVKNTTSYPPMCCQE---PIGGQMLSDLFTNRKERL---IPEF 377
P+G RF PP+P WS ++N T +PP+C Q + ML FT + + I E
Sbjct: 78 PIGEKRFLPPEPPPSWSGIRNATHFPPVCPQNIHTAVPEVMLPVWFTANLDIVATYIQEP 137
Query: 378 SEDCLYLNIYTPA----------------------DLTKRGRLPVMVWIHGGGLVVGGAS 491
+EDCLYLN+Y P D+ G PVMV+IHGG + G +
Sbjct: 138 NEDCLYLNVYVPTEDGSGAKKQGEDLADNDGDEDEDIRDSGAKPVMVYIHGGSYMEGTGN 197
Query: 492 TYDGLALAAHENVVVVAIQYRLGIWGFFSTGDEHSRGNWGHLDQVAALHWVQENIANFGG 671
DG LA++ NV+V+ + YR+G+ GF STGD+ ++GN+G LDQ+ AL WV ENIA FGG
Sbjct: 198 MIDGSVLASYGNVIVITLNYRVGVLGFLSTGDQAAKGNYGLLDQIQALRWVSENIAFFGG 257
Query: 672 DPGSVTIFGESAGGESVSVLVLSPLAKNLFHRAISESGVAFTAGLVRKDMKAAAKQIAVL 851
DP +T+FG G VS+L LS ++ LF RAI +SG A ++ V +A
Sbjct: 258 DPRRITVFGSGIGASCVSLLTLSHHSEGLFQRAIIQSGSALSSWAVNYQPVKYTSLLADK 317
Query: 852 AGW*NTTSAVFVHCLRQKSEDELLDLTLKMKFFALDLHGDPRESHPFLTTVVDEVLLPQM 1031
G + V CLRQKS EL++ ++ P H V+D ++P
Sbjct: 318 VGCNVLDTVDMVDCLRQKSAKELVEQDIQ-----------PARYHVAFGPVIDGDVIPDD 366
Query: 1032 PEGDLAEKDF 1061
PE + + +F
Sbjct: 367 PEILMEQGEF 376
>ref|XP_003135218.1| PREDICTED: neuroligin-3 isoform 3 [Sus scrofa].
Length = 848
Score = 211 bits (536), Expect = 7e-55
Identities = 136/390 (34%), Positives = 190/390 (48%), Gaps = 49/390 (12%)
Frame = +3
Query: 39 MWLLPLVLTSLASSATWAGQPASPPVVDTAQGRVLGKYVSLEG-LAQPVAVFLGVPFAKP 215
+W L LVL A A P V+T G++ G V L + PV +LGVP+A P
Sbjct: 26 LWFLSLVLR--------ASTQAPAPTVNTHFGKLRGARVPLPSEILGPVDQYLGVPYAAP 77
Query: 216 PLGSLRFAPPQPAEPWSFVKNTTSYPPMCCQE---PIGGQMLSDLFTNRKERL---IPEF 377
P+G RF PP+P WS ++N T +PP+C Q + ML FT + + I E
Sbjct: 78 PIGEKRFLPPEPPPSWSGIRNATHFPPVCPQNIHTAVPEVMLPVWFTANLDIVATYIQEP 137
Query: 378 SEDCLYLNIYTPADLTKR------------------------------------------ 431
+EDCLYLN+Y P + KR
Sbjct: 138 NEDCLYLNVYVPTEDVKRISKECARKPNKKICRKGGSGAKKQGEDLADNDGDEDEDIRDS 197
Query: 432 GRLPVMVWIHGGGLVVGGASTYDGLALAAHENVVVVAIQYRLGIWGFFSTGDEHSRGNWG 611
G PVMV+IHGG + G + DG LA++ NV+V+ + YR+G+ GF STGD+ ++GN+G
Sbjct: 198 GAKPVMVYIHGGSYMEGTGNMIDGSVLASYGNVIVITLNYRVGVLGFLSTGDQAAKGNYG 257
Query: 612 HLDQVAALHWVQENIANFGGDPGSVTIFGESAGGESVSVLVLSPLAKNLFHRAISESGVA 791
LDQ+ AL WV ENIA FGGDP +T+FG G VS+L LS ++ LF RAI +SG A
Sbjct: 258 LLDQIQALRWVSENIAFFGGDPRRITVFGSGIGASCVSLLTLSHHSEGLFQRAIIQSGSA 317
Query: 792 FTAGLVRKDMKAAAKQIAVLAGW*NTTSAVFVHCLRQKSEDELLDLTLKMKFFALDLHGD 971
++ V +A G + V CLRQKS EL++ ++
Sbjct: 318 LSSWAVNYQPVKYTSLLADKVGCNVLDTVDMVDCLRQKSAKELVEQDIQ----------- 366
Query: 972 PRESHPFLTTVVDEVLLPQMPEGDLAEKDF 1061
P H V+D ++P PE + + +F
Sbjct: 367 PARYHVAFGPVIDGDVIPDDPEILMEQGEF 396
>ref|XP_003354529.1| PREDICTED: acetylcholinesterase-like [Sus scrofa].
Length = 613
Score = 195 bits (495), Expect = 4e-50
Identities = 137/363 (37%), Positives = 187/363 (51%), Gaps = 17/363 (4%)
Frame = +3
Query: 24 CP---PSKMWLLPLVLTSLASSATWAGQPASPPVVDTAQGRVLGKYVSLEGLAQPVAVFL 194
CP PS L L+L L A G P P ++ T +G L + +SL PV+ FL
Sbjct: 6 CPLHTPSLASPLLLLLFLLGGGAEAEG-PEDPELLVTVRGGRL-RGISLMAPGGPVSAFL 63
Query: 195 GVPFAKPPLGSLRFAPPQPAEPWSFVKNTTSYPPMCCQEP---IGGQMLSDLFTNRKERL 365
G+PFA+PP+G RF PP+P PW V + T++ +C Q G ++++ +E
Sbjct: 64 GIPFAEPPVGPRRFLPPEPKRPWPGVLDATAFQSVCYQYVDTLYPGFEGTEMWNPNRE-- 121
Query: 366 IPEFSEDCLYLNIYTPADLTKRGRLPVMVWIHGGGLVVGGAS--TYDGLALAAHENVVVV 539
SEDCLYLN++TP PV+VWI+GGG G +S YDG LA E V+V
Sbjct: 122 ---LSEDCLYLNVWTPYP-RPASPTPVLVWIYGGGFYSGASSLDVYDGRFLAQVEGTVLV 177
Query: 540 AIQYRLGIWGFFST-GDEHSRGNWGHLDQVAALHWVQENIANFGGDPGSVTIFGESAGGE 716
++ YR+G +GF + G + GN G LDQ AL WVQEN+A FGGDP SVT+FGESAG
Sbjct: 178 SMNYRVGAFGFLALPGSREAPGNVGLLDQRLALQWVQENVAAFGGDPMSVTLFGESAGAA 237
Query: 717 SVSVLVLSPLAKNLFHRAISESG------VAFTAGLVRKDMKAAAKQIAVLAGW*NTTSA 878
SV + +LSP ++ LFHRA+ +SG G R+ A+ + G
Sbjct: 238 SVGMHLLSPPSRGLFHRAVLQSGAPNGPWATVGVGEARRRATLLARLVGCPPGGAGGNDT 297
Query: 879 VFVHCLRQKSEDELLDLTLKMKFFALDLHGDPRES--HPFLTTVVDEVLLPQMPEGDLAE 1052
V CLR ++ +L+D + H P+ES VVD L PE +
Sbjct: 298 ELVACLRTRTAQDLVD---------HEWHVLPQESVFRFSFVPVVDGDFLSDTPEALINA 348
Query: 1053 KDF 1061
DF
Sbjct: 349 GDF 351
>ref|XP_003358712.1| PREDICTED: cholinesterase-like [Sus scrofa].
Length = 602
Score = 184 bits (466), Expect = 1e-46
Identities = 121/312 (38%), Positives = 167/312 (53%), Gaps = 10/312 (3%)
Frame = +3
Query: 114 VVDTAQGRVLGKYVSLEGLAQPVAVFLGVPFAKPPLGSLRFAPPQPAEPWSFVKNTTSYP 293
+V T G+V G ++L L V FLG+P+A+PPLG LRF PQ W + N T Y
Sbjct: 33 IVTTKNGKVRG--MNLPVLGGTVTAFLGIPYAQPPLGRLRFKKPQSMTKWPDIWNATKYA 90
Query: 294 PMCCQ---EPIGGQMLSDLFTNRKERLIPEFSEDCLYLNIYTPADLTKRGRLPVMVWIHG 464
C Q + G + S+++ E SEDCLYLN++ PA K VM+WI+G
Sbjct: 91 NSCYQNTDQSFPGFVGSEMWNPNTE-----LSEDCLYLNVWIPAPKPKNAT--VMIWIYG 143
Query: 465 GGLVVGGAS--TYDGLALAAHENVVVVAIQYRLGIWGFFST-GDEHSRGNWGHLDQVAAL 635
GG G +S YDG L+ E V+VV++ YR+G GF + G+ + GN G DQ AL
Sbjct: 144 GGFQTGTSSLHVYDGKFLSRVERVIVVSMNYRVGALGFLALPGNPEAPGNMGLFDQQLAL 203
Query: 636 HWVQENIANFGGDPGSVTIFGESAGGESVSVLVLSPLAKNLFHRAISESGVAFTAGLVRK 815
WVQ+NIA FGG+P SVT+FGESAG SVS+ +LSP + LF RAI +SG + V
Sbjct: 204 QWVQKNIAAFGGNPKSVTLFGESAGAVSVSLHLLSPRSHPLFARAILQSGSSNAPWAVTS 263
Query: 816 DMKAAAK--QIAVLAGW*NTTSAVFVHCLRQKSEDELL--DLTLKMKFFALDLHGDPRES 983
+A + +A G + CLR K E+L ++ + L ++ P
Sbjct: 264 LYEARNRTLTLAKFIGCSRENETEIIKCLRNKDPQEILQNEVFVVPNHMLLSVNFGPTVD 323
Query: 984 HPFLTTVVDEVL 1019
FLT + D +L
Sbjct: 324 GDFLTDLPDTLL 335
>ref|XP_003353742.1| PREDICTED: bile salt-activated lipase [Sus scrofa].
Length = 632
Score = 164 bits (416), Expect = 6e-41
Identities = 109/279 (39%), Positives = 136/279 (48%), Gaps = 9/279 (3%)
Frame = +3
Query: 90 AGQPASPPVVDTAQGRVLGKYVSLEGLAQPVAVFLGVPFAKPPLGSLRFAPPQPAEPWSF 269
A + A V T G V G L L V +F G+PFA P PQ W
Sbjct: 17 AARAAKLGSVYTEGGFVEGVNKKLSLLGDSVDIFKGIPFAAAPKA---LENPQRHPGWQG 73
Query: 270 VKNTTSYPPMCCQEPIGGQMLSDLFTNRKERLIPEFSEDCLYLNIYTPADLTKRGR-LPV 446
+ C Q I EDCLYLNI+ P + R LPV
Sbjct: 74 TLKAKDFKKRCLQATITQDSTYG-------------DEDCLYLNIWVPQGRKEVSRDLPV 120
Query: 447 MVWIHGGGLVVGGAS--------TYDGLALAAHENVVVVAIQYRLGIWGFFSTGDEHSRG 602
M+WI+GG ++G YDG LA NV+VV YR+G GF STGD + G
Sbjct: 121 MIWIYGGAFLMGSGQGANFLSNYLYDGEELATRGNVIVVTFNYRVGPLGFLSTGDANLPG 180
Query: 603 NWGHLDQVAALHWVQENIANFGGDPGSVTIFGESAGGESVSVLVLSPLAKNLFHRAISES 782
N+G DQ A+ WV+ NIA FGGDP ++TIFGESAGG SVS+ LSP K L RAIS+S
Sbjct: 181 NYGLRDQHMAIAWVKRNIAAFGGDPDNITIFGESAGGASVSLQTLSPYNKGLIKRAISQS 240
Query: 783 GVAFTAGLVRKDMKAAAKQIAVLAGW*NTTSAVFVHCLR 899
GVA + ++K+ + AK IA G +A CL+
Sbjct: 241 GVALSPWAIQKNPLSWAKTIAEKVGCPMDDTARMARCLK 279
>ref|XP_003360403.1| PREDICTED: neuroligin-3 [Sus scrofa].
Length = 711
Score = 160 bits (405), Expect = 1e-39
Identities = 94/254 (37%), Positives = 132/254 (51%), Gaps = 22/254 (8%)
Frame = +3
Query: 366 IPEFSEDCLYLNIYTPA----------------------DLTKRGRLPVMVWIHGGGLVV 479
I E +EDCLYLN+Y P D+ G PVMV+IHGG +
Sbjct: 17 IQEPNEDCLYLNVYVPTEDGSGAKKQGEDLADNDGDEDEDIRDSGAKPVMVYIHGGSYME 76
Query: 480 GGASTYDGLALAAHENVVVVAIQYRLGIWGFFSTGDEHSRGNWGHLDQVAALHWVQENIA 659
G + DG LA++ NV+V+ + YR+G+ GF STGD+ ++GN+G LDQ+ AL WV ENIA
Sbjct: 77 GTGNMIDGSVLASYGNVIVITLNYRVGVLGFLSTGDQAAKGNYGLLDQIQALRWVSENIA 136
Query: 660 NFGGDPGSVTIFGESAGGESVSVLVLSPLAKNLFHRAISESGVAFTAGLVRKDMKAAAKQ 839
FGGDP +T+FG G VS+L LS ++ LF RAI +SG A ++ V
Sbjct: 137 FFGGDPRRITVFGSGIGASCVSLLTLSHHSEGLFQRAIIQSGSALSSWAVNYQPVKYTSL 196
Query: 840 IAVLAGW*NTTSAVFVHCLRQKSEDELLDLTLKMKFFALDLHGDPRESHPFLTTVVDEVL 1019
+A G + V CLRQKS EL++ ++ P H V+D +
Sbjct: 197 LADKVGCNVLDTVDMVDCLRQKSAKELVEQDIQ-----------PARYHVAFGPVIDGDV 245
Query: 1020 LPQMPEGDLAEKDF 1061
+P PE + + +F
Sbjct: 246 IPDDPEILMEQGEF 259
>ref|XP_003358309.1| PREDICTED: neuroligin-2, partial [Sus scrofa].
Length = 680
Score = 156 bits (395), Expect = 2e-38
Identities = 84/215 (39%), Positives = 125/215 (58%)
Frame = +3
Query: 417 DLTKRGRLPVMVWIHGGGLVVGGASTYDGLALAAHENVVVVAIQYRLGIWGFFSTGDEHS 596
D+ G+ PVM+++HGG + G + +DG LAA+ NV+V + YRLG+ GF STGD+ +
Sbjct: 48 DIRDSGKKPVMLFLHGGSYMEGTGNMFDGSVLAAYGNVIVATLNYRLGVLGFLSTGDQAA 107
Query: 597 RGNWGHLDQVAALHWVQENIANFGGDPGSVTIFGESAGGESVSVLVLSPLAKNLFHRAIS 776
+GN+G LDQ+ AL W+ ENIA+FGGDP +TIFG AG V++L+LS ++ LF +AI+
Sbjct: 108 KGNYGLLDQIQALRWLSENIAHFGGDPERITIFGSGAGASCVNLLILSHHSEGLFQKAIA 167
Query: 777 ESGVAFTAGLVRKDMKAAAKQIAVLAGW*NTTSAVFVHCLRQKSEDELLDLTLKMKFFAL 956
+SG A ++ V + +A G SA V CLR+K EL+D ++
Sbjct: 168 QSGTAISSWSVNYQPLKYTRLLAAKVGCDREDSAEAVECLRRKPSRELVDQDVQ------ 221
Query: 957 DLHGDPRESHPFLTTVVDEVLLPQMPEGDLAEKDF 1061
P H VVD ++P PE + + +F
Sbjct: 222 -----PARYHIAFGPVVDGDVVPDDPEILMQQGEF 251
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 32,835,895
Number of extensions: 1088745
Number of successful extensions: 5353
Number of sequences better than 1.0e-05: 17
Number of HSP's gapped: 5269
Number of HSP's successfully gapped: 19
Length of query: 361
Length of database: 11,343,932
Length adjustment: 100
Effective length of query: 261
Effective length of database: 8,854,232
Effective search space: 2310954552
Effective search space used: 2310954552
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-000829
(1085 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr06 418 e-114
gb|GL894786.1| Sus scrofa unplaced genomic scaffold chrU_scaffol... 72 7e-10
>Sscrofa_Chr06
|| Length = 157765593
Score = 418 bits (211), Expect = e-114
Identities = 211/211 (100%)
Strand = Plus / Minus
Query: 90 gcagggcagccagcctcgccgcctgttgtggacactgcccagggccgagtcctggggaag 149
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27169194 gcagggcagccagcctcgccgcctgttgtggacactgcccagggccgagtcctggggaag 27169135
Query: 150 tacgtcagcttagaaggcctggcacagccggtggccgtcttcctgggagtcccttttgcc 209
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27169134 tacgtcagcttagaaggcctggcacagccggtggccgtcttcctgggagtcccttttgcc 27169075
Query: 210 aagccccctctcggatccttgaggtttgctccgccgcagcctgcagaaccatggagcttc 269
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27169074 aagccccctctcggatccttgaggtttgctccgccgcagcctgcagaaccatggagcttc 27169015
Query: 270 gtgaagaacaccacctcctaccctcccatgt 300
|||||||||||||||||||||||||||||||
Sbjct: 27169014 gtgaagaacaccacctcctaccctcccatgt 27168984
Score = 418 bits (211), Expect = e-114
Identities = 211/211 (100%)
Strand = Plus / Minus
Query: 90 gcagggcagccagcctcgccgcctgttgtggacactgcccagggccgagtcctggggaag 149
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27377028 gcagggcagccagcctcgccgcctgttgtggacactgcccagggccgagtcctggggaag 27376969
Query: 150 tacgtcagcttagaaggcctggcacagccggtggccgtcttcctgggagtcccttttgcc 209
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27376968 tacgtcagcttagaaggcctggcacagccggtggccgtcttcctgggagtcccttttgcc 27376909
Query: 210 aagccccctctcggatccttgaggtttgctccgccgcagcctgcagaaccatggagcttc 269
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27376908 aagccccctctcggatccttgaggtttgctccgccgcagcctgcagaaccatggagcttc 27376849
Query: 270 gtgaagaacaccacctcctaccctcccatgt 300
|||||||||||||||||||||||||||||||
Sbjct: 27376848 gtgaagaacaccacctcctaccctcccatgt 27376818
Score = 315 bits (159), Expect = 3e-83
Identities = 159/159 (100%)
Strand = Plus / Minus
Query: 575 cagcacaggggacgaacacagccggggcaactggggtcacttggaccaggtggccgcact 634
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27280592 cagcacaggggacgaacacagccggggcaactggggtcacttggaccaggtggccgcact 27280533
Query: 635 gcactgggtccaggagaacatcgccaactttggaggcgacccaggctctgtgaccatctt 694
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27280532 gcactgggtccaggagaacatcgccaactttggaggcgacccaggctctgtgaccatctt 27280473
Query: 695 tggagagtcagcaggaggggaaagtgtctctgttctggt 733
|||||||||||||||||||||||||||||||||||||||
Sbjct: 27280472 tggagagtcagcaggaggggaaagtgtctctgttctggt 27280434
Score = 315 bits (159), Expect = 3e-83
Identities = 159/159 (100%)
Strand = Plus / Minus
Query: 575 cagcacaggggacgaacacagccggggcaactggggtcacttggaccaggtggccgcact 634
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27366229 cagcacaggggacgaacacagccggggcaactggggtcacttggaccaggtggccgcact 27366170
Query: 635 gcactgggtccaggagaacatcgccaactttggaggcgacccaggctctgtgaccatctt 694
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27366169 gcactgggtccaggagaacatcgccaactttggaggcgacccaggctctgtgaccatctt 27366110
Query: 695 tggagagtcagcaggaggggaaagtgtctctgttctggt 733
|||||||||||||||||||||||||||||||||||||||
Sbjct: 27366109 tggagagtcagcaggaggggaaagtgtctctgttctggt 27366071
Score = 309 bits (156), Expect = 2e-81
Identities = 159/160 (99%)
Strand = Plus / Minus
Query: 575 cagcacaggggacgaacacagccggggcaactggggtcacttggaccaggtggccgcact 634
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27159345 cagcacaggggatgaacacagccggggcaactggggtcacttggaccaggtggccgcact 27159286
Query: 635 gcactgggtccaggagaacatcgccaactttggaggcgacccaggctctgtgaccatctt 694
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27159285 gcactgggtccaggagaacatcgccaactttggaggcgacccaggctctgtgaccatctt 27159226
Query: 695 tggagagtcagcaggaggggaaagtgtctctgttctggtg 734
||||||||||||||||||||||||||||||||||||||||
Sbjct: 27159225 tggagagtcagcaggaggggaaagtgtctctgttctggtg 27159186
Score = 309 bits (156), Expect = 2e-81
Identities = 159/160 (99%)
Strand = Plus / Plus
Query: 575 cagcacaggggacgaacacagccggggcaactggggtcacttggaccaggtggccgcact 634
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27331769 cagcacaggggatgaacacagccggggcaactggggtcacttggaccaggtggccgcact 27331828
Query: 635 gcactgggtccaggagaacatcgccaactttggaggcgacccaggctctgtgaccatctt 694
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27331829 gcactgggtccaggagaacatcgccaactttggaggcgacccaggctctgtgaccatctt 27331888
Query: 695 tggagagtcagcaggaggggaaagtgtctctgttctggtg 734
||||||||||||||||||||||||||||||||||||||||
Sbjct: 27331889 tggagagtcagcaggaggggaaagtgtctctgttctggtg 27331928
Score = 301 bits (152), Expect = 4e-79
Identities = 155/156 (99%)
Strand = Plus / Minus
Query: 290 ccctcccatgtgctgccaagagccaattgggggacagatgctctcagatctatttaccaa 349
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27285732 ccctcccaggtgctgccaagagccaattgggggacagatgctctcagatctatttaccaa 27285673
Query: 350 cagaaaggagaggctcattccggagttttctgaagactgtctctacctaaatatttacac 409
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27285672 cagaaaggagaggctcattccggagttttctgaagactgtctctacctaaatatttacac 27285613
Query: 410 ccctgctgacctgacaaagaggggcagactgccggt 445
||||||||||||||||||||||||||||||||||||
Sbjct: 27285612 ccctgctgacctgacaaagaggggcagactgccggt 27285577
Score = 268 bits (135), Expect = 6e-69
Identities = 135/135 (100%)
Strand = Plus / Minus
Query: 443 ggtgatggtgtggatccacggaggaggtctggtggtgggcggggcttccacctatgatgg 502
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27282993 ggtgatggtgtggatccacggaggaggtctggtggtgggcggggcttccacctatgatgg 27282934
Query: 503 actggccctcgctgcgcatgaaaacgtggtggtggtggccatccagtaccgcctgggcat 562
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27282933 actggccctcgctgcgcatgaaaacgtggtggtggtggccatccagtaccgcctgggcat 27282874
Query: 563 ctggggattcttcag 577
|||||||||||||||
Sbjct: 27282873 ctggggattcttcag 27282859
Score = 268 bits (135), Expect = 6e-69
Identities = 135/135 (100%)
Strand = Plus / Minus
Query: 443 ggtgatggtgtggatccacggaggaggtctggtggtgggcggggcttccacctatgatgg 502
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27368630 ggtgatggtgtggatccacggaggaggtctggtggtgggcggggcttccacctatgatgg 27368571
Query: 503 actggccctcgctgcgcatgaaaacgtggtggtggtggccatccagtaccgcctgggcat 562
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27368570 actggccctcgctgcgcatgaaaacgtggtggtggtggccatccagtaccgcctgggcat 27368511
Query: 563 ctggggattcttcag 577
|||||||||||||||
Sbjct: 27368510 ctggggattcttcag 27368496
Score = 238 bits (120), Expect = 5e-60
Identities = 147/156 (94%)
Strand = Plus / Minus
Query: 290 ccctcccatgtgctgccaagagccaattgggggacagatgctctcagatctatttaccaa 349
|||||||| ||||||||| || ||| | | ||| |||||| ||||||||||||||||||
Sbjct: 27371368 ccctcccaggtgctgccaggacccagtagcggggcagatgacctcagatctatttaccaa 27371309
Query: 350 cagaaaggagaggctcattccggagttttctgaagactgtctctacctaaatatttacac 409
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27371308 cagaaaggagaggctcattccggagttttctgaagactgtctctacctaaatatttacac 27371249
Query: 410 ccctgctgacctgacaaagaggggcagactgccggt 445
||||||||||||||||||||||||||||||||||||
Sbjct: 27371248 ccctgctgacctgacaaagaggggcagactgccggt 27371213
Score = 210 bits (106), Expect = 1e-51
Identities = 106/106 (100%)
Strand = Plus / Minus
Query: 731 ggtgttgtctcccttggccaagaacctcttccaccgggccatctctgagagtggcgtggc 790
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27278954 ggtgttgtctcccttggccaagaacctcttccaccgggccatctctgagagtggcgtggc 27278895
Query: 791 cttcactgctggcctggtcaggaaggacatgaaggctgcagctaag 836
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27278894 cttcactgctggcctggtcaggaaggacatgaaggctgcagctaag 27278849
Score = 206 bits (104), Expect = 2e-50
Identities = 143/156 (91%)
Strand = Plus / Plus
Query: 290 ccctcccatgtgctgccaagagccaattgggggacagatgctctcagatctatttaccaa 349
|||||||| ||||||||| || ||| | | || |||||| ||||||||||||||||||
Sbjct: 27325098 ccctcccaggtgctgccaggacccagtagtggagcagatgacctcagatctatttaccaa 27325157
Query: 350 cagaaaggagaggctcattccggagttttctgaagactgtctctacctaaatatttacac 409
| ||||||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 27325158 cggaaaggagaggctcactctggagttttctgaagactgtctctacctaaatatttacac 27325217
Query: 410 ccctgctgacctgacaaagaggggcagactgccggt 445
||||||||||||||||||||||||||||||||||||
Sbjct: 27325218 ccctgctgacctgacaaagaggggcagactgccggt 27325253
Score = 206 bits (104), Expect = 2e-50
Identities = 143/156 (91%)
Strand = Plus / Minus
Query: 290 ccctcccatgtgctgccaagagccaattgggggacagatgctctcagatctatttaccaa 349
|||||||| ||||||||| || ||| | | || |||||| ||||||||||||||||||
Sbjct: 60009604 ccctcccaggtgctgccaggacccagtagtggagcagatgacctcagatctatttaccaa 60009545
Query: 350 cagaaaggagaggctcattccggagttttctgaagactgtctctacctaaatatttacac 409
| ||||||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 60009544 cggaaaggagaggctcactctggagttttctgaagactgtctctacctaaatatttacac 60009485
Query: 410 ccctgctgacctgacaaagaggggcagactgccggt 445
||||||||||||||||||||||||||||||||||||
Sbjct: 60009484 ccctgctgacctgacaaagaggggcagactgccggt 60009449
Score = 188 bits (95), Expect = 4e-45
Identities = 104/107 (97%)
Strand = Plus / Minus
Query: 835 agcaaattgctgtccttgctgggtggtaaaacaccacctcggctgtctttgttcactgcc 894
||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||
Sbjct: 27277039 agcaaattgctgtccttgctgggtgtaaaaccaccacctcggctgtctttgttcactgcc 27276980
Query: 895 tgcgccagaagtcggaggacgagctcttggacttaacgctgaagatg 941
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27276979 tgcgccagaagtcggaggacgagctcttggacttaacgctgaagatg 27276933
Score = 188 bits (95), Expect = 4e-45
Identities = 104/107 (97%)
Strand = Plus / Plus
Query: 835 agcaaattgctgtccttgctgggtggtaaaacaccacctcggctgtctttgttcactgcc 894
||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||
Sbjct: 27297712 agcaaattgctgtccttgctgggtgtaaaaccaccacctcggctgtctttgttcactgcc 27297771
Query: 895 tgcgccagaagtcggaggacgagctcttggacttaacgctgaagatg 941
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27297772 tgcgccagaagtcggaggacgagctcttggacttaacgctgaagatg 27297818
Score = 188 bits (95), Expect = 4e-45
Identities = 104/107 (97%)
Strand = Plus / Plus
Query: 835 agcaaattgctgtccttgctgggtggtaaaacaccacctcggctgtctttgttcactgcc 894
||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||
Sbjct: 27336689 agcaaattgctgtccttgctgggtgtaaaaccaccacctcggctgtctttgttcactgcc 27336748
Query: 895 tgcgccagaagtcggaggacgagctcttggacttaacgctgaagatg 941
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27336749 tgcgccagaagtcggaggacgagctcttggacttaacgctgaagatg 27336795
Score = 186 bits (94), Expect = 2e-44
Identities = 103/106 (97%)
Strand = Plus / Plus
Query: 731 ggtgttgtctcccttggccaagaacctcttccaccgggccatctctgagagtggcgtggc 790
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27335430 ggtgttgtctcccttggccaagaacctcttccaccgggccatctctgagagtggcgtggc 27335489
Query: 791 cttcactgctggcctggtcaggaaggacatgaaggctgcagctaag 836
| |||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 27335490 cctcactgttgccctggtcaggaaggacatgaaggctgcagctaag 27335535
Score = 178 bits (90), Expect = 4e-42
Identities = 90/90 (100%)
Strand = Plus / Minus
Query: 1 cagagacctgcaggcataggagctgccctccttccaagatgtggcttctcccgctggtcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27172294 cagagacctgcaggcataggagctgccctccttccaagatgtggcttctcccgctggtcc 27172235
Query: 61 tgacctccctcgcctcttctgcaacttggg 90
||||||||||||||||||||||||||||||
Sbjct: 27172234 tgacctccctcgcctcttctgcaacttggg 27172205
Score = 178 bits (90), Expect = 4e-42
Identities = 90/90 (100%)
Strand = Plus / Minus
Query: 1 cagagacctgcaggcataggagctgccctccttccaagatgtggcttctcccgctggtcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27295867 cagagacctgcaggcataggagctgccctccttccaagatgtggcttctcccgctggtcc 27295808
Query: 61 tgacctccctcgcctcttctgcaacttggg 90
||||||||||||||||||||||||||||||
Sbjct: 27295807 tgacctccctcgcctcttctgcaacttggg 27295778
Score = 172 bits (87), Expect = 3e-40
Identities = 123/135 (91%)
Strand = Plus / Minus
Query: 443 ggtgatggtgtggatccacggaggaggtctggtggtgggcggggcttccacctatgatgg 502
||||||||||||||||||||||||||| |||||| |||||||||| | | ||||||||
Sbjct: 27163225 ggtgatggtgtggatccacggaggaggcctggtgttgggcggggcaccaatgtatgatgg 27163166
Query: 503 actggccctcgctgcgcatgaaaacgtggtggtggtggccatccagtaccgcctgggcat 562
||| || ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27163165 ggtggtgcttgctgcgcatgaaaacgtggtggtggtggccatccagtaccgcctgggcat 27163106
Query: 563 ctggggattcttcag 577
|||||||||||||||
Sbjct: 27163105 ctggggattcttcag 27163091
Score = 172 bits (87), Expect = 3e-40
Identities = 123/135 (91%)
Strand = Plus / Plus
Query: 443 ggtgatggtgtggatccacggaggaggtctggtggtgggcggggcttccacctatgatgg 502
||||||||||||||||||||||||||| |||||| |||||||||| | | ||||||||
Sbjct: 27327884 ggtgatggtgtggatccacggaggaggcctggtgttgggcggggcaccaatgtatgatgg 27327943
Query: 503 actggccctcgctgcgcatgaaaacgtggtggtggtggccatccagtaccgcctgggcat 562
||| || ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27327944 ggtggtgcttgctgcgcatgaaaacgtggtggtggtggccatccagtaccgcctgggcat 27328003
Query: 563 ctggggattcttcag 577
|||||||||||||||
Sbjct: 27328004 ctggggattcttcag 27328018
Score = 159 bits (80), Expect = 4e-36
Identities = 103/108 (95%), Gaps = 2/108 (1%)
Strand = Plus / Plus
Query: 979 agagccatcccttcctgaccactgtggtggatgaagtgctgctgccccaaatgcctgaag 1038
||||||||||||||||||||||||||||||||| ||||||||||||| | |||||||||
Sbjct: 59981245 agagccatcccttcctgaccactgtggtggatggagtgctgctgcccaagatgcctgaa- 59981303
Query: 1039 gaga-tctggctgaaaaggatttcacactgtcccctacatcgtgggaa 1085
|||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 59981304 gagattctggctgaaaaggatttcacactgtcccctacatcgtgggaa 59981351
Score = 157 bits (79), Expect = 2e-35
Identities = 85/87 (97%)
Strand = Plus / Minus
Query: 4 agacctgcaggcataggagctgccctccttccaagatgtggcttctcccgctggtcctga 63
||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 27380193 agacctgcaggcacaggagctgccatccttccaagatgtggcttctcccgctggtcctga 27380134
Query: 64 cctccctcgcctcttctgcaacttggg 90
|||||||||||||||||||||||||||
Sbjct: 27380133 cctccctcgcctcttctgcaacttggg 27380107
Score = 145 bits (73), Expect = 6e-32
Identities = 103/109 (94%), Gaps = 3/109 (2%)
Strand = Plus / Plus
Query: 979 agagccatcccttcctgaccactgtggtggatgaagtgctgctgccccaaatgcctgaag 1038
||||||||||||||||||||||||||||||||| ||||||||||||| | |||||||||
Sbjct: 27301154 agagccatcccttcctgaccactgtggtggatggagtgctgctgcccaagatgcctgaa- 27301212
Query: 1039 gaga-tctggctgaaaaggatttc-acactgtcccctacatcgtgggaa 1085
|||| ||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 27301213 gagattctggctgaaaaggatttcaacactgtcccctacatcgtgggaa 27301261
Score = 129 bits (65), Expect = 3e-27
Identities = 101/109 (92%), Gaps = 3/109 (2%)
Strand = Plus / Plus
Query: 979 agagccatcccttcctgaccactgtggtggatgaagtgctgctgccccaaatgcctgaag 1038
||||||||||||||||| ||||||||||||||| ||||||||||||| | |||||||||
Sbjct: 27341899 agagccatcccttcctgcccactgtggtggatggagtgctgctgcccaagatgcctgaa- 27341957
Query: 1039 gaga-tctggctgaaaaggatttc-acactgtcccctacatcgtgggaa 1085
|||| ||||||||| ||||||||| ||||||||||||||||||||||||
Sbjct: 27341958 gagattctggctgagaaggatttcaacactgtcccctacatcgtgggaa 27342006
Score = 79.8 bits (40), Expect = 3e-12
Identities = 40/40 (100%)
Strand = Plus / Plus
Query: 941 gaaatttttcgctcttgatttgcatggagaccccagagag 980
||||||||||||||||||||||||||||||||||||||||
Sbjct: 59980141 gaaatttttcgctcttgatttgcatggagaccccagagag 59980180
>gb|GL894786.1| Sus scrofa unplaced genomic scaffold chrU_scaffold3416
Length = 27586
Score = 71.9 bits (36), Expect = 7e-10
Identities = 54/60 (90%)
Strand = Plus / Plus
Query: 638 ctgggtccaggagaacatcgccaactttggaggcgacccaggctctgtgaccatctttgg 697
|||||||||| |||| |||||| |||||||||||||||| ||| |||| |||||||||||
Sbjct: 1687 ctgggtccagcagaatatcgcctactttggaggcgaccccggccctgtcaccatctttgg 1746
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 31,340,577
Number of extensions: 197
Number of successful extensions: 197
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 191
Number of HSP's successfully gapped: 27
Length of query: 1085
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 1064
Effective length of database: 2,808,413,156
Effective search space: 2988151597984
Effective search space used: 2988151597984
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)