Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-000932
(939 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001029874.1| beta-enolase [Bos taurus]. 431 e-152
Alignment gi|NP_776474.2| alpha-enolase [Bos taurus]. 382 e-131
Alignment gi|NP_001094595.1| gamma-enolase [Bos taurus]. 380 e-129
>ref|NP_001029874.1| beta-enolase [Bos taurus].
Length = 434
Score = 431 bits (1108), Expect(2) = e-152
Identities = 217/220 (98%), Positives = 219/220 (99%)
Frame = +2
Query: 56 MAMQKIFAREILDSRGNPTVEVDLHTAKGRFRAAVPSGASTGIYEALELRDGDKSRYLGK 235
MAMQKIFAREILDSRGNPTVEVDLHTAKGRFRAAVPSGASTGIYEALELRDGDKSRYLGK
Sbjct: 1 MAMQKIFAREILDSRGNPTVEVDLHTAKGRFRAAVPSGASTGIYEALELRDGDKSRYLGK 60
Query: 236 GVLKAVEHINKTLGPALLEKKLSVVDQEKVDKFMIELDGTENKSKFGANAILGVSLAVCK 415
GVLKAVEHINKTLGPALLEKKLSVVDQEKVDKFMIELDGTENKSKFGANAILGVSLAVCK
Sbjct: 61 GVLKAVEHINKTLGPALLEKKLSVVDQEKVDKFMIELDGTENKSKFGANAILGVSLAVCK 120
Query: 416 AGAAEKGVPLYRHIADLAGNPDLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFRE 595
AGAAEKGVPLYRHIADLAGNP+L+LPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFRE
Sbjct: 121 AGAAEKGVPLYRHIADLAGNPELILPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFRE 180
Query: 596 AMRIGAEVYHHLKGVIKGKYGKDATNVGDEGGFAPNILEN 715
AMRIGAEVYHHLKGVIK KYGKDATNVGDEGGFAPNILEN
Sbjct: 181 AMRIGAEVYHHLKGVIKAKYGKDATNVGDEGGFAPNILEN 220
Score = 125 bits (313), Expect(2) = e-152
Identities = 60/65 (92%), Positives = 64/65 (98%)
Frame = +1
Query: 715 HEALELLKTAIQAAGYPDKVVIGMDVAASEFYRNGKYDLDFKSPDDPSRHITGEKLGELY 894
+EALELLKTAIQAAGYPDKVVIGMDVAASEFYRNGKYDLDFKSPDDP+RHI+GEKLGELY
Sbjct: 221 NEALELLKTAIQAAGYPDKVVIGMDVAASEFYRNGKYDLDFKSPDDPARHISGEKLGELY 280
Query: 895 KIFIR 909
K FI+
Sbjct: 281 KNFIK 285
>ref|NP_776474.2| alpha-enolase [Bos taurus].
Length = 434
Score = 382 bits (980), Expect(2) = e-131
Identities = 189/220 (85%), Positives = 205/220 (93%)
Frame = +2
Query: 56 MAMQKIFAREILDSRGNPTVEVDLHTAKGRFRAAVPSGASTGIYEALELRDGDKSRYLGK 235
M++ K+ AREI DSRGNPTVEVDL TAKG FRAAVPSGASTGIYEALELRD DK+RY+GK
Sbjct: 1 MSILKVHAREIFDSRGNPTVEVDLFTAKGLFRAAVPSGASTGIYEALELRDNDKTRYMGK 60
Query: 236 GVLKAVEHINKTLGPALLEKKLSVVDQEKVDKFMIELDGTENKSKFGANAILGVSLAVCK 415
GV KAVEHINKT+ PAL+ KKL+VV+QEK+DK MIE+DGTENKSKFGANAILGVSLAVCK
Sbjct: 61 GVSKAVEHINKTIAPALVSKKLNVVEQEKIDKLMIEMDGTENKSKFGANAILGVSLAVCK 120
Query: 416 AGAAEKGVPLYRHIADLAGNPDLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFRE 595
AGA EKGVPLYRHIADLAGN +++LPVPAFNVINGGSHAGNKLAMQEFMILPVGA +FRE
Sbjct: 121 AGAVEKGVPLYRHIADLAGNAEVILPVPAFNVINGGSHAGNKLAMQEFMILPVGAENFRE 180
Query: 596 AMRIGAEVYHHLKGVIKGKYGKDATNVGDEGGFAPNILEN 715
AMRIGAEVYH+LK VIK KYGKDATNVGDEGGFAPNILEN
Sbjct: 181 AMRIGAEVYHNLKNVIKEKYGKDATNVGDEGGFAPNILEN 220
Score = 105 bits (261), Expect(2) = e-131
Identities = 52/64 (81%), Positives = 56/64 (87%)
Frame = +1
Query: 718 EALELLKTAIQAAGYPDKVVIGMDVAASEFYRNGKYDLDFKSPDDPSRHITGEKLGELYK 897
EALELLK AI AGY DKVVIGMDVAASEFYR+GKYDLDFKSPDDPSR+IT ++L LYK
Sbjct: 222 EALELLKNAIGKAGYSDKVVIGMDVAASEFYRSGKYDLDFKSPDDPSRYITPDELANLYK 281
Query: 898 IFIR 909
FIR
Sbjct: 282 SFIR 285
>ref|NP_001094595.1| gamma-enolase [Bos taurus].
Length = 434
Score = 380 bits (975), Expect(2) = e-129
Identities = 188/220 (85%), Positives = 204/220 (92%)
Frame = +2
Query: 56 MAMQKIFAREILDSRGNPTVEVDLHTAKGRFRAAVPSGASTGIYEALELRDGDKSRYLGK 235
M+++KI+AREILDSRGNPTVEVDLHTAKG FRAAVPSGASTGIYEALELRDGDK RYLGK
Sbjct: 1 MSIEKIWAREILDSRGNPTVEVDLHTAKGLFRAAVPSGASTGIYEALELRDGDKQRYLGK 60
Query: 236 GVLKAVEHINKTLGPALLEKKLSVVDQEKVDKFMIELDGTENKSKFGANAILGVSLAVCK 415
GVLKAV+HIN T+ P L+ LSVV+QEK+D M++LDGTENKSKFGANAILGVSLAVCK
Sbjct: 61 GVLKAVDHINTTIAPVLISSGLSVVEQEKLDNLMLDLDGTENKSKFGANAILGVSLAVCK 120
Query: 416 AGAAEKGVPLYRHIADLAGNPDLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFRE 595
AGAAE+ +PLYRHIA LAGN DL+LPVPAFNVINGGSHAGNKLAMQEFMILPVGA SFR+
Sbjct: 121 AGAAERELPLYRHIAQLAGNSDLILPVPAFNVINGGSHAGNKLAMQEFMILPVGAESFRD 180
Query: 596 AMRIGAEVYHHLKGVIKGKYGKDATNVGDEGGFAPNILEN 715
AMR+GAEVYH LKGVIK KYGKDATNVGDEGGFAPNILEN
Sbjct: 181 AMRLGAEVYHTLKGVIKDKYGKDATNVGDEGGFAPNILEN 220
Score = 102 bits (253), Expect(2) = e-129
Identities = 48/64 (75%), Positives = 57/64 (89%)
Frame = +1
Query: 718 EALELLKTAIQAAGYPDKVVIGMDVAASEFYRNGKYDLDFKSPDDPSRHITGEKLGELYK 897
EALEL+K AI AGY +K+VIGMDVAASEFYR+GKYDLDFKSP DPSR+ITG++LG LY+
Sbjct: 222 EALELVKEAIDKAGYTEKIVIGMDVAASEFYRDGKYDLDFKSPADPSRYITGDQLGALYQ 281
Query: 898 IFIR 909
F+R
Sbjct: 282 DFVR 285
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 44,251,733
Number of extensions: 1458871
Number of successful extensions: 6399
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 6344
Number of HSP's successfully gapped: 6
Length of query: 313
Length of database: 17,681,374
Length adjustment: 102
Effective length of query: 211
Effective length of database: 14,306,398
Effective search space: 3018649978
Effective search space used: 3018649978
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-000932
(939 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_536606.2| PREDICTED: similar to Beta enolase (2-phospho-D... 433 e-153
Alignment gi|XP_856204.1| PREDICTED: similar to Beta enolase (2-phospho-D... 427 e-151
Alignment gi|XP_534902.2| PREDICTED: similar to Gamma enolase (2-phospho-... 383 e-130
Alignment gi|XP_867321.1| PREDICTED: similar to Gamma enolase (2-phospho-... 383 e-130
Alignment gi|XP_867312.1| PREDICTED: similar to Gamma enolase (2-phospho-... 383 e-129
Alignment gi|XP_867303.1| PREDICTED: similar to Gamma enolase (2-phospho-... 376 e-127
Alignment gi|XP_536735.2| PREDICTED: similar to Alpha enolase (2-phospho-... 257 1e-93
Alignment gi|XP_859293.1| PREDICTED: similar to Alpha enolase (2-phospho-... 257 3e-93
Alignment gi|XP_859212.1| PREDICTED: similar to Alpha enolase (2-phospho-... 257 3e-93
Alignment gi|XP_859543.1| PREDICTED: similar to Alpha enolase (2-phospho-... 251 9e-92
>ref|XP_536606.2| PREDICTED: similar to Beta enolase (2-phospho-D-glycerate
hydro-lyase) (Muscle-specific enolase) (MSE) (Skeletal
muscle enolase) (Enolase 3) isoform 1 [Canis
familiaris].
Length = 434
Score = 433 bits (1113), Expect(2) = e-153
Identities = 219/220 (99%), Positives = 219/220 (99%)
Frame = +2
Query: 56 MAMQKIFAREILDSRGNPTVEVDLHTAKGRFRAAVPSGASTGIYEALELRDGDKSRYLGK 235
MAMQKIFAREILDSRGNPTVEVDLHTAKGRFRAAVPSGASTGIYEALELRDGDKSRYLGK
Sbjct: 1 MAMQKIFAREILDSRGNPTVEVDLHTAKGRFRAAVPSGASTGIYEALELRDGDKSRYLGK 60
Query: 236 GVLKAVEHINKTLGPALLEKKLSVVDQEKVDKFMIELDGTENKSKFGANAILGVSLAVCK 415
GVLKAVEHINKTLGPALLEKKLSVVDQEKVDKFMIELDGTENKSKFGANAILGVSLAVCK
Sbjct: 61 GVLKAVEHINKTLGPALLEKKLSVVDQEKVDKFMIELDGTENKSKFGANAILGVSLAVCK 120
Query: 416 AGAAEKGVPLYRHIADLAGNPDLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFRE 595
AGAAEKGVPLYRHIADLAGNPDLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFRE
Sbjct: 121 AGAAEKGVPLYRHIADLAGNPDLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFRE 180
Query: 596 AMRIGAEVYHHLKGVIKGKYGKDATNVGDEGGFAPNILEN 715
AMRIGAEVYHHLKGVIK KYGKDATNVGDEGGFAPNILEN
Sbjct: 181 AMRIGAEVYHHLKGVIKAKYGKDATNVGDEGGFAPNILEN 220
Score = 127 bits (318), Expect(2) = e-153
Identities = 61/65 (93%), Positives = 64/65 (98%)
Frame = +1
Query: 715 HEALELLKTAIQAAGYPDKVVIGMDVAASEFYRNGKYDLDFKSPDDPSRHITGEKLGELY 894
+EALELLKTAIQAAGYPDKVVIGMDVAASEFYRNGKYDLDFKSPDDP+RHITGEKLGELY
Sbjct: 221 NEALELLKTAIQAAGYPDKVVIGMDVAASEFYRNGKYDLDFKSPDDPARHITGEKLGELY 280
Query: 895 KIFIR 909
K FI+
Sbjct: 281 KSFIK 285
>ref|XP_856204.1| PREDICTED: similar to Beta enolase (2-phospho-D-glycerate
hydro-lyase) (Muscle-specific enolase) (MSE) (Skeletal
muscle enolase) (Enolase 3) isoform 2 [Canis
familiaris].
Length = 437
Score = 427 bits (1099), Expect(2) = e-151
Identities = 219/223 (98%), Positives = 219/223 (98%), Gaps = 3/223 (1%)
Frame = +2
Query: 56 MAMQKIFAREILDSRGNPTVEVDLHTAKGRFRAAVPSGASTGIYEALELRDGDKSRYLGK 235
MAMQKIFAREILDSRGNPTVEVDLHTAKGRFRAAVPSGASTGIYEALELRDGDKSRYLGK
Sbjct: 1 MAMQKIFAREILDSRGNPTVEVDLHTAKGRFRAAVPSGASTGIYEALELRDGDKSRYLGK 60
Query: 236 GVLKAVEHINKTLGPALLEKKLSVVDQEKVDKFMIELDGTENK---SKFGANAILGVSLA 406
GVLKAVEHINKTLGPALLEKKLSVVDQEKVDKFMIELDGTENK SKFGANAILGVSLA
Sbjct: 61 GVLKAVEHINKTLGPALLEKKLSVVDQEKVDKFMIELDGTENKWQWSKFGANAILGVSLA 120
Query: 407 VCKAGAAEKGVPLYRHIADLAGNPDLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASS 586
VCKAGAAEKGVPLYRHIADLAGNPDLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASS
Sbjct: 121 VCKAGAAEKGVPLYRHIADLAGNPDLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASS 180
Query: 587 FREAMRIGAEVYHHLKGVIKGKYGKDATNVGDEGGFAPNILEN 715
FREAMRIGAEVYHHLKGVIK KYGKDATNVGDEGGFAPNILEN
Sbjct: 181 FREAMRIGAEVYHHLKGVIKAKYGKDATNVGDEGGFAPNILEN 223
Score = 127 bits (318), Expect(2) = e-151
Identities = 61/65 (93%), Positives = 64/65 (98%)
Frame = +1
Query: 715 HEALELLKTAIQAAGYPDKVVIGMDVAASEFYRNGKYDLDFKSPDDPSRHITGEKLGELY 894
+EALELLKTAIQAAGYPDKVVIGMDVAASEFYRNGKYDLDFKSPDDP+RHITGEKLGELY
Sbjct: 224 NEALELLKTAIQAAGYPDKVVIGMDVAASEFYRNGKYDLDFKSPDDPARHITGEKLGELY 283
Query: 895 KIFIR 909
K FI+
Sbjct: 284 KSFIK 288
>ref|XP_534902.2| PREDICTED: similar to Gamma enolase (2-phospho-D-glycerate
hydro-lyase) (Neural enolase) (Neuron-specific enolase)
(NSE) (Enolase 2) isoform 2 [Canis familiaris].
Length = 434
Score = 383 bits (983), Expect(2) = e-130
Identities = 190/220 (86%), Positives = 205/220 (93%)
Frame = +2
Query: 56 MAMQKIFAREILDSRGNPTVEVDLHTAKGRFRAAVPSGASTGIYEALELRDGDKSRYLGK 235
M+++KI+AREILDSRGNPTVEVDLHTAKG FRAAVPSGASTGIYEALELRDGDK RYLGK
Sbjct: 1 MSIEKIWAREILDSRGNPTVEVDLHTAKGLFRAAVPSGASTGIYEALELRDGDKQRYLGK 60
Query: 236 GVLKAVEHINKTLGPALLEKKLSVVDQEKVDKFMIELDGTENKSKFGANAILGVSLAVCK 415
GVLKAV+HIN T+ PAL+ LSVV+QEK+D M+ELDGTENKSKFGANAILGVSLAVCK
Sbjct: 61 GVLKAVDHINTTIAPALISSGLSVVEQEKLDNLMLELDGTENKSKFGANAILGVSLAVCK 120
Query: 416 AGAAEKGVPLYRHIADLAGNPDLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFRE 595
AGAAE+ +PLYRHIA LAGN DL+LPVPAFNVINGGSHAGNKLAMQEFMILPVGA SFR+
Sbjct: 121 AGAAERDLPLYRHIAQLAGNSDLILPVPAFNVINGGSHAGNKLAMQEFMILPVGAESFRD 180
Query: 596 AMRIGAEVYHHLKGVIKGKYGKDATNVGDEGGFAPNILEN 715
AMR+GAEVYH LKGVIK KYGKDATNVGDEGGFAPNILEN
Sbjct: 181 AMRLGAEVYHTLKGVIKDKYGKDATNVGDEGGFAPNILEN 220
Score = 100 bits (248), Expect(2) = e-130
Identities = 47/64 (73%), Positives = 57/64 (89%)
Frame = +1
Query: 718 EALELLKTAIQAAGYPDKVVIGMDVAASEFYRNGKYDLDFKSPDDPSRHITGEKLGELYK 897
EALEL+K AI AGY +K+VIGMDVAASEF+R+GKYDLDFKSP DPSR+ITG++LG LY+
Sbjct: 222 EALELVKEAIDKAGYTEKIVIGMDVAASEFHRDGKYDLDFKSPADPSRYITGDQLGALYQ 281
Query: 898 IFIR 909
F+R
Sbjct: 282 DFVR 285
>ref|XP_867321.1| PREDICTED: similar to Gamma enolase (2-phospho-D-glycerate
hydro-lyase) (Neural enolase) (Neuron-specific enolase)
(NSE) (Enolase 2) isoform 5 [Canis familiaris].
Length = 412
Score = 383 bits (983), Expect(2) = e-130
Identities = 190/220 (86%), Positives = 205/220 (93%)
Frame = +2
Query: 56 MAMQKIFAREILDSRGNPTVEVDLHTAKGRFRAAVPSGASTGIYEALELRDGDKSRYLGK 235
M+++KI+AREILDSRGNPTVEVDLHTAKG FRAAVPSGASTGIYEALELRDGDK RYLGK
Sbjct: 1 MSIEKIWAREILDSRGNPTVEVDLHTAKGLFRAAVPSGASTGIYEALELRDGDKQRYLGK 60
Query: 236 GVLKAVEHINKTLGPALLEKKLSVVDQEKVDKFMIELDGTENKSKFGANAILGVSLAVCK 415
GVLKAV+HIN T+ PAL+ LSVV+QEK+D M+ELDGTENKSKFGANAILGVSLAVCK
Sbjct: 61 GVLKAVDHINTTIAPALISSGLSVVEQEKLDNLMLELDGTENKSKFGANAILGVSLAVCK 120
Query: 416 AGAAEKGVPLYRHIADLAGNPDLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFRE 595
AGAAE+ +PLYRHIA LAGN DL+LPVPAFNVINGGSHAGNKLAMQEFMILPVGA SFR+
Sbjct: 121 AGAAERDLPLYRHIAQLAGNSDLILPVPAFNVINGGSHAGNKLAMQEFMILPVGAESFRD 180
Query: 596 AMRIGAEVYHHLKGVIKGKYGKDATNVGDEGGFAPNILEN 715
AMR+GAEVYH LKGVIK KYGKDATNVGDEGGFAPNILEN
Sbjct: 181 AMRLGAEVYHTLKGVIKDKYGKDATNVGDEGGFAPNILEN 220
Score = 100 bits (248), Expect(2) = e-130
Identities = 47/64 (73%), Positives = 57/64 (89%)
Frame = +1
Query: 718 EALELLKTAIQAAGYPDKVVIGMDVAASEFYRNGKYDLDFKSPDDPSRHITGEKLGELYK 897
EALEL+K AI AGY +K+VIGMDVAASEF+R+GKYDLDFKSP DPSR+ITG++LG LY+
Sbjct: 222 EALELVKEAIDKAGYTEKIVIGMDVAASEFHRDGKYDLDFKSPADPSRYITGDQLGALYQ 281
Query: 898 IFIR 909
F+R
Sbjct: 282 DFVR 285
>ref|XP_867312.1| PREDICTED: similar to Gamma enolase (2-phospho-D-glycerate
hydro-lyase) (Neural enolase) (Neuron-specific enolase)
(NSE) (Enolase 2) isoform 4 [Canis familiaris].
Length = 443
Score = 383 bits (983), Expect(2) = e-129
Identities = 190/220 (86%), Positives = 205/220 (93%)
Frame = +2
Query: 56 MAMQKIFAREILDSRGNPTVEVDLHTAKGRFRAAVPSGASTGIYEALELRDGDKSRYLGK 235
M+++KI+AREILDSRGNPTVEVDLHTAKG FRAAVPSGASTGIYEALELRDGDK RYLGK
Sbjct: 1 MSIEKIWAREILDSRGNPTVEVDLHTAKGLFRAAVPSGASTGIYEALELRDGDKQRYLGK 60
Query: 236 GVLKAVEHINKTLGPALLEKKLSVVDQEKVDKFMIELDGTENKSKFGANAILGVSLAVCK 415
GVLKAV+HIN T+ PAL+ LSVV+QEK+D M+ELDGTENKSKFGANAILGVSLAVCK
Sbjct: 61 GVLKAVDHINTTIAPALISSGLSVVEQEKLDNLMLELDGTENKSKFGANAILGVSLAVCK 120
Query: 416 AGAAEKGVPLYRHIADLAGNPDLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFRE 595
AGAAE+ +PLYRHIA LAGN DL+LPVPAFNVINGGSHAGNKLAMQEFMILPVGA SFR+
Sbjct: 121 AGAAERDLPLYRHIAQLAGNSDLILPVPAFNVINGGSHAGNKLAMQEFMILPVGAESFRD 180
Query: 596 AMRIGAEVYHHLKGVIKGKYGKDATNVGDEGGFAPNILEN 715
AMR+GAEVYH LKGVIK KYGKDATNVGDEGGFAPNILEN
Sbjct: 181 AMRLGAEVYHTLKGVIKDKYGKDATNVGDEGGFAPNILEN 220
Score = 97.1 bits (240), Expect(2) = e-129
Identities = 46/62 (74%), Positives = 55/62 (88%)
Frame = +1
Query: 718 EALELLKTAIQAAGYPDKVVIGMDVAASEFYRNGKYDLDFKSPDDPSRHITGEKLGELYK 897
EALEL+K AI AGY +K+VIGMDVAASEF+R+GKYDLDFKSP DPSR+ITG++LG LY+
Sbjct: 222 EALELVKEAIDKAGYTEKIVIGMDVAASEFHRDGKYDLDFKSPADPSRYITGDQLGALYQ 281
Query: 898 IF 903
F
Sbjct: 282 DF 283
>ref|XP_867303.1| PREDICTED: similar to Gamma enolase (2-phospho-D-glycerate
hydro-lyase) (Neural enolase) (Neuron-specific enolase)
(NSE) (Enolase 2) isoform 3 [Canis familiaris].
Length = 411
Score = 376 bits (965), Expect(2) = e-127
Identities = 186/218 (85%), Positives = 202/218 (92%)
Frame = +2
Query: 56 MAMQKIFAREILDSRGNPTVEVDLHTAKGRFRAAVPSGASTGIYEALELRDGDKSRYLGK 235
M+++KI+AREILDSRGNPTVEVDLHTAKG FRAAVPSGASTGIYEALELRDGDK RYLGK
Sbjct: 1 MSIEKIWAREILDSRGNPTVEVDLHTAKGLFRAAVPSGASTGIYEALELRDGDKQRYLGK 60
Query: 236 GVLKAVEHINKTLGPALLEKKLSVVDQEKVDKFMIELDGTENKSKFGANAILGVSLAVCK 415
GVLKAV+HIN T+ PAL+ LSVV+QEK+D M+ELDGTENKSKFGANAILGVSLAVCK
Sbjct: 61 GVLKAVDHINTTIAPALISSGLSVVEQEKLDNLMLELDGTENKSKFGANAILGVSLAVCK 120
Query: 416 AGAAEKGVPLYRHIADLAGNPDLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFRE 595
AGAAE+ +PLYRHIA LAGN DL+LPVPAFNVINGGSHAGNKLAMQEFMILPVGA SFR+
Sbjct: 121 AGAAERDLPLYRHIAQLAGNSDLILPVPAFNVINGGSHAGNKLAMQEFMILPVGAESFRD 180
Query: 596 AMRIGAEVYHHLKGVIKGKYGKDATNVGDEGGFAPNIL 709
AMR+GAEVYH LKGVIK KYGKDATNVGDEGGFAPN +
Sbjct: 181 AMRLGAEVYHTLKGVIKDKYGKDATNVGDEGGFAPNCI 218
Score = 98.2 bits (243), Expect(2) = e-127
Identities = 46/63 (73%), Positives = 56/63 (88%)
Frame = +1
Query: 721 ALELLKTAIQAAGYPDKVVIGMDVAASEFYRNGKYDLDFKSPDDPSRHITGEKLGELYKI 900
ALEL+K AI AGY +K+VIGMDVAASEF+R+GKYDLDFKSP DPSR+ITG++LG LY+
Sbjct: 222 ALELVKEAIDKAGYTEKIVIGMDVAASEFHRDGKYDLDFKSPADPSRYITGDQLGALYQD 281
Query: 901 FIR 909
F+R
Sbjct: 282 FVR 284
>ref|XP_536735.2| PREDICTED: similar to Alpha enolase (2-phospho-D-glycerate
hydro-lyase) (Non-neural enolase) (NNE) (Enolase 1)
(Phosphopyruvate hydratase) (C-myc promoter-binding
protein) (MBP-1) (MPB-1) (Plasminogen-binding protein)
isoform 1 [Canis familiaris].
Length = 415
Score = 257 bits (656), Expect(3) = 1e-93
Identities = 132/199 (66%), Positives = 160/199 (80%)
Frame = +2
Query: 56 MAMQKIFAREILDSRGNPTVEVDLHTAKGRFRAAVPSGASTGIYEALELRDGDKSRYLGK 235
M++ KI AREI DSRGNPTVEVDL+T+KG FRAAVPSGASTGIYEALELRD DK+RY+GK
Sbjct: 1 MSILKIHAREIFDSRGNPTVEVDLYTSKGLFRAAVPSGASTGIYEALELRDNDKTRYMGK 60
Query: 236 GVLKAVEHINKTLGPALLEKKLSVVDQEKVDKFMIELDGTENKSKFGANAILGVSLAVCK 415
GV KAVEHINKT+ PAL+ KK++VV+QEK+DK MIE+DGTENKSKFGANAILGVSLAVCK
Sbjct: 61 GVSKAVEHINKTIAPALISKKVNVVEQEKIDKLMIEMDGTENKSKFGANAILGVSLAVCK 120
Query: 416 AGAAEKGVPLYRHIADLAGNPDLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFRE 595
AGA EKGVPLYRHIADLAGN +++LPVPA V G+ + L M P+ +++
Sbjct: 121 AGAVEKGVPLYRHIADLAGNSEVILPVPALEV--SGADTCHLLRM------PLSRGLYKK 172
Query: 596 AMRIGAEVYHHLKGVIKGK 652
++ G + L GV++G+
Sbjct: 173 SLAAGEGMQSTLTGVLRGE 191
Score = 104 bits (259), Expect(3) = 1e-93
Identities = 51/64 (79%), Positives = 57/64 (89%)
Frame = +1
Query: 718 EALELLKTAIQAAGYPDKVVIGMDVAASEFYRNGKYDLDFKSPDDPSRHITGEKLGELYK 897
EALELLK AI AGY DKVVIGMDVAASEF+R+GKYDLDFKSPDDPSR+IT ++L +LYK
Sbjct: 203 EALELLKNAIGKAGYTDKVVIGMDVAASEFFRSGKYDLDFKSPDDPSRYITPDQLADLYK 262
Query: 898 IFIR 909
FIR
Sbjct: 263 SFIR 266
Score = 22.7 bits (47), Expect(3) = 1e-93
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +3
Query: 894 QDFHQNYPVVSIGDP 938
+ F ++YPVVSI DP
Sbjct: 262 KSFIRDYPVVSIEDP 276
>ref|XP_859293.1| PREDICTED: similar to Alpha enolase (2-phospho-D-glycerate
hydro-lyase) (Non-neural enolase) (NNE) (Enolase 1)
(Phosphopyruvate hydratase) (C-myc promoter-binding
protein) (MBP-1) (MPB-1) (Plasminogen-binding protein)
isoform 5 [Canis familiaris].
Length = 419
Score = 257 bits (656), Expect(2) = 3e-93
Identities = 132/199 (66%), Positives = 160/199 (80%)
Frame = +2
Query: 56 MAMQKIFAREILDSRGNPTVEVDLHTAKGRFRAAVPSGASTGIYEALELRDGDKSRYLGK 235
M++ KI AREI DSRGNPTVEVDL+T+KG FRAAVPSGASTGIYEALELRD DK+RY+GK
Sbjct: 1 MSILKIHAREIFDSRGNPTVEVDLYTSKGLFRAAVPSGASTGIYEALELRDNDKTRYMGK 60
Query: 236 GVLKAVEHINKTLGPALLEKKLSVVDQEKVDKFMIELDGTENKSKFGANAILGVSLAVCK 415
GV KAVEHINKT+ PAL+ KK++VV+QEK+DK MIE+DGTENKSKFGANAILGVSLAVCK
Sbjct: 61 GVSKAVEHINKTIAPALISKKVNVVEQEKIDKLMIEMDGTENKSKFGANAILGVSLAVCK 120
Query: 416 AGAAEKGVPLYRHIADLAGNPDLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFRE 595
AGA EKGVPLYRHIADLAGN +++LPVPA V G+ + L M P+ +++
Sbjct: 121 AGAVEKGVPLYRHIADLAGNSEVILPVPALEV--SGADTCHLLRM------PLSRGLYKK 172
Query: 596 AMRIGAEVYHHLKGVIKGK 652
++ G + L GV++G+
Sbjct: 173 SLAAGEGMQSTLTGVLRGE 191
Score = 104 bits (259), Expect(2) = 3e-93
Identities = 51/64 (79%), Positives = 57/64 (89%)
Frame = +1
Query: 718 EALELLKTAIQAAGYPDKVVIGMDVAASEFYRNGKYDLDFKSPDDPSRHITGEKLGELYK 897
EALELLK AI AGY DKVVIGMDVAASEF+R+GKYDLDFKSPDDPSR+IT ++L +LYK
Sbjct: 203 EALELLKNAIGKAGYTDKVVIGMDVAASEFFRSGKYDLDFKSPDDPSRYITPDQLADLYK 262
Query: 898 IFIR 909
FIR
Sbjct: 263 SFIR 266
>ref|XP_859212.1| PREDICTED: similar to Alpha enolase (2-phospho-D-glycerate
hydro-lyase) (Non-neural enolase) (NNE) (Enolase 1)
(Phosphopyruvate hydratase) (C-myc promoter-binding
protein) (MBP-1) (MPB-1) (Plasminogen-binding protein)
isoform 3 [Canis familiaris].
Length = 391
Score = 257 bits (656), Expect(2) = 3e-93
Identities = 132/199 (66%), Positives = 160/199 (80%)
Frame = +2
Query: 56 MAMQKIFAREILDSRGNPTVEVDLHTAKGRFRAAVPSGASTGIYEALELRDGDKSRYLGK 235
M++ KI AREI DSRGNPTVEVDL+T+KG FRAAVPSGASTGIYEALELRD DK+RY+GK
Sbjct: 1 MSILKIHAREIFDSRGNPTVEVDLYTSKGLFRAAVPSGASTGIYEALELRDNDKTRYMGK 60
Query: 236 GVLKAVEHINKTLGPALLEKKLSVVDQEKVDKFMIELDGTENKSKFGANAILGVSLAVCK 415
GV KAVEHINKT+ PAL+ KK++VV+QEK+DK MIE+DGTENKSKFGANAILGVSLAVCK
Sbjct: 61 GVSKAVEHINKTIAPALISKKVNVVEQEKIDKLMIEMDGTENKSKFGANAILGVSLAVCK 120
Query: 416 AGAAEKGVPLYRHIADLAGNPDLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFRE 595
AGA EKGVPLYRHIADLAGN +++LPVPA V G+ + L M P+ +++
Sbjct: 121 AGAVEKGVPLYRHIADLAGNSEVILPVPALEV--SGADTCHLLRM------PLSRGLYKK 172
Query: 596 AMRIGAEVYHHLKGVIKGK 652
++ G + L GV++G+
Sbjct: 173 SLAAGEGMQSTLTGVLRGE 191
Score = 104 bits (259), Expect(2) = 3e-93
Identities = 51/64 (79%), Positives = 57/64 (89%)
Frame = +1
Query: 718 EALELLKTAIQAAGYPDKVVIGMDVAASEFYRNGKYDLDFKSPDDPSRHITGEKLGELYK 897
EALELLK AI AGY DKVVIGMDVAASEF+R+GKYDLDFKSPDDPSR+IT ++L +LYK
Sbjct: 203 EALELLKNAIGKAGYTDKVVIGMDVAASEFFRSGKYDLDFKSPDDPSRYITPDQLADLYK 262
Query: 898 IFIR 909
FIR
Sbjct: 263 SFIR 266
>ref|XP_859543.1| PREDICTED: similar to Alpha enolase (2-phospho-D-glycerate
hydro-lyase) (Non-neural enolase) (NNE) (Enolase 1)
(Phosphopyruvate hydratase) (C-myc promoter-binding
protein) (MBP-1) (MPB-1) (Plasminogen-binding protein)
isoform 12 [Canis familiaris].
Length = 393
Score = 251 bits (640), Expect(3) = 9e-92
Identities = 131/199 (65%), Positives = 156/199 (78%)
Frame = +2
Query: 56 MAMQKIFAREILDSRGNPTVEVDLHTAKGRFRAAVPSGASTGIYEALELRDGDKSRYLGK 235
M++ KI AREI DSRGNPTVEVDL+T+KG FRAAVPSGASTGIYEALELRD DK+RY+GK
Sbjct: 1 MSILKIHAREIFDSRGNPTVEVDLYTSKGLFRAAVPSGASTGIYEALELRDNDKTRYMGK 60
Query: 236 GVLKAVEHINKTLGPALLEKKLSVVDQEKVDKFMIELDGTENKSKFGANAILGVSLAVCK 415
GV KAVEHINKT+ PAL+ KK S QEK+DK MIE+DGTENKSKFGANAILGVSLAVCK
Sbjct: 61 GVSKAVEHINKTIAPALISKKYSSRAQEKIDKLMIEMDGTENKSKFGANAILGVSLAVCK 120
Query: 416 AGAAEKGVPLYRHIADLAGNPDLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFRE 595
AGA EKGVPLYRHIADLAGN +++LPVPA V G+ + L M P+ +++
Sbjct: 121 AGAVEKGVPLYRHIADLAGNSEVILPVPALEV--SGADTCHLLRM------PLSRGLYKK 172
Query: 596 AMRIGAEVYHHLKGVIKGK 652
++ G + L GV++G+
Sbjct: 173 SLAAGEGMQSTLTGVLRGE 191
Score = 104 bits (259), Expect(3) = 9e-92
Identities = 51/64 (79%), Positives = 57/64 (89%)
Frame = +1
Query: 718 EALELLKTAIQAAGYPDKVVIGMDVAASEFYRNGKYDLDFKSPDDPSRHITGEKLGELYK 897
EALELLK AI AGY DKVVIGMDVAASEF+R+GKYDLDFKSPDDPSR+IT ++L +LYK
Sbjct: 203 EALELLKNAIGKAGYTDKVVIGMDVAASEFFRSGKYDLDFKSPDDPSRYITPDQLADLYK 262
Query: 898 IFIR 909
FIR
Sbjct: 263 SFIR 266
Score = 22.7 bits (47), Expect(3) = 9e-92
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +3
Query: 894 QDFHQNYPVVSIGDP 938
+ F ++YPVVSI DP
Sbjct: 262 KSFIRDYPVVSIEDP 276
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 46,170,538
Number of extensions: 1509719
Number of successful extensions: 6437
Number of sequences better than 1.0e-05: 27
Number of HSP's gapped: 6387
Number of HSP's successfully gapped: 64
Length of query: 313
Length of database: 18,874,504
Length adjustment: 103
Effective length of query: 210
Effective length of database: 15,440,896
Effective search space: 3242588160
Effective search space used: 3242588160
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-000932
(939 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_443739.3| beta-enolase isoform 1 [Homo sapiens]. 424 e-150
Alignment gi|NP_001967.3| beta-enolase isoform 1 [Homo sapiens]. 424 e-150
Alignment gi|NP_001966.1| gamma-enolase [Homo sapiens]. 380 e-130
Alignment gi|NP_001419.1| alpha-enolase isoform 1 [Homo sapiens]. 380 e-129
Alignment gi|NP_001180432.1| beta-enolase isoform 2 [Homo sapiens]. 326 e-121
Alignment gi|NP_001188412.1| c-myc promoter-binding protein-1 isoform MBP... 238 3e-87
>ref|NP_443739.3| beta-enolase isoform 1 [Homo sapiens].
Length = 434
Score = 424 bits (1090), Expect(2) = e-150
Identities = 213/220 (96%), Positives = 217/220 (98%)
Frame = +2
Query: 56 MAMQKIFAREILDSRGNPTVEVDLHTAKGRFRAAVPSGASTGIYEALELRDGDKSRYLGK 235
MAMQKIFAREILDSRGNPTVEVDLHTAKGRFRAAVPSGASTGIYEALELRDGDK RYLGK
Sbjct: 1 MAMQKIFAREILDSRGNPTVEVDLHTAKGRFRAAVPSGASTGIYEALELRDGDKGRYLGK 60
Query: 236 GVLKAVEHINKTLGPALLEKKLSVVDQEKVDKFMIELDGTENKSKFGANAILGVSLAVCK 415
GVLKAVE+IN TLGPALL+KKLSVVDQEKVDKFMIELDGTENKSKFGANAILGVSLAVCK
Sbjct: 61 GVLKAVENINNTLGPALLQKKLSVVDQEKVDKFMIELDGTENKSKFGANAILGVSLAVCK 120
Query: 416 AGAAEKGVPLYRHIADLAGNPDLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFRE 595
AGAAEKGVPLYRHIADLAGNPDL+LPVPAFNVINGGSHAGNKLAMQEFMILPVGASSF+E
Sbjct: 121 AGAAEKGVPLYRHIADLAGNPDLILPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKE 180
Query: 596 AMRIGAEVYHHLKGVIKGKYGKDATNVGDEGGFAPNILEN 715
AMRIGAEVYHHLKGVIK KYGKDATNVGDEGGFAPNILEN
Sbjct: 181 AMRIGAEVYHHLKGVIKAKYGKDATNVGDEGGFAPNILEN 220
Score = 127 bits (318), Expect(2) = e-150
Identities = 61/65 (93%), Positives = 64/65 (98%)
Frame = +1
Query: 715 HEALELLKTAIQAAGYPDKVVIGMDVAASEFYRNGKYDLDFKSPDDPSRHITGEKLGELY 894
+EALELLKTAIQAAGYPDKVVIGMDVAASEFYRNGKYDLDFKSPDDP+RHITGEKLGELY
Sbjct: 221 NEALELLKTAIQAAGYPDKVVIGMDVAASEFYRNGKYDLDFKSPDDPARHITGEKLGELY 280
Query: 895 KIFIR 909
K FI+
Sbjct: 281 KSFIK 285
>ref|NP_001967.3| beta-enolase isoform 1 [Homo sapiens].
Length = 434
Score = 424 bits (1090), Expect(2) = e-150
Identities = 213/220 (96%), Positives = 217/220 (98%)
Frame = +2
Query: 56 MAMQKIFAREILDSRGNPTVEVDLHTAKGRFRAAVPSGASTGIYEALELRDGDKSRYLGK 235
MAMQKIFAREILDSRGNPTVEVDLHTAKGRFRAAVPSGASTGIYEALELRDGDK RYLGK
Sbjct: 1 MAMQKIFAREILDSRGNPTVEVDLHTAKGRFRAAVPSGASTGIYEALELRDGDKGRYLGK 60
Query: 236 GVLKAVEHINKTLGPALLEKKLSVVDQEKVDKFMIELDGTENKSKFGANAILGVSLAVCK 415
GVLKAVE+IN TLGPALL+KKLSVVDQEKVDKFMIELDGTENKSKFGANAILGVSLAVCK
Sbjct: 61 GVLKAVENINNTLGPALLQKKLSVVDQEKVDKFMIELDGTENKSKFGANAILGVSLAVCK 120
Query: 416 AGAAEKGVPLYRHIADLAGNPDLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFRE 595
AGAAEKGVPLYRHIADLAGNPDL+LPVPAFNVINGGSHAGNKLAMQEFMILPVGASSF+E
Sbjct: 121 AGAAEKGVPLYRHIADLAGNPDLILPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKE 180
Query: 596 AMRIGAEVYHHLKGVIKGKYGKDATNVGDEGGFAPNILEN 715
AMRIGAEVYHHLKGVIK KYGKDATNVGDEGGFAPNILEN
Sbjct: 181 AMRIGAEVYHHLKGVIKAKYGKDATNVGDEGGFAPNILEN 220
Score = 127 bits (318), Expect(2) = e-150
Identities = 61/65 (93%), Positives = 64/65 (98%)
Frame = +1
Query: 715 HEALELLKTAIQAAGYPDKVVIGMDVAASEFYRNGKYDLDFKSPDDPSRHITGEKLGELY 894
+EALELLKTAIQAAGYPDKVVIGMDVAASEFYRNGKYDLDFKSPDDP+RHITGEKLGELY
Sbjct: 221 NEALELLKTAIQAAGYPDKVVIGMDVAASEFYRNGKYDLDFKSPDDPARHITGEKLGELY 280
Query: 895 KIFIR 909
K FI+
Sbjct: 281 KSFIK 285
>ref|NP_001966.1| gamma-enolase [Homo sapiens].
Length = 434
Score = 380 bits (977), Expect(2) = e-130
Identities = 189/220 (85%), Positives = 205/220 (93%)
Frame = +2
Query: 56 MAMQKIFAREILDSRGNPTVEVDLHTAKGRFRAAVPSGASTGIYEALELRDGDKSRYLGK 235
M+++KI+AREILDSRGNPTVEVDL+TAKG FRAAVPSGASTGIYEALELRDGDK RYLGK
Sbjct: 1 MSIEKIWAREILDSRGNPTVEVDLYTAKGLFRAAVPSGASTGIYEALELRDGDKQRYLGK 60
Query: 236 GVLKAVEHINKTLGPALLEKKLSVVDQEKVDKFMIELDGTENKSKFGANAILGVSLAVCK 415
GVLKAV+HIN T+ PAL+ LSVV+QEK+D M+ELDGTENKSKFGANAILGVSLAVCK
Sbjct: 61 GVLKAVDHINSTIAPALISSGLSVVEQEKLDNLMLELDGTENKSKFGANAILGVSLAVCK 120
Query: 416 AGAAEKGVPLYRHIADLAGNPDLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFRE 595
AGAAE+ +PLYRHIA LAGN DL+LPVPAFNVINGGSHAGNKLAMQEFMILPVGA SFR+
Sbjct: 121 AGAAERELPLYRHIAQLAGNSDLILPVPAFNVINGGSHAGNKLAMQEFMILPVGAESFRD 180
Query: 596 AMRIGAEVYHHLKGVIKGKYGKDATNVGDEGGFAPNILEN 715
AMR+GAEVYH LKGVIK KYGKDATNVGDEGGFAPNILEN
Sbjct: 181 AMRLGAEVYHTLKGVIKDKYGKDATNVGDEGGFAPNILEN 220
Score = 102 bits (254), Expect(2) = e-130
Identities = 48/64 (75%), Positives = 57/64 (89%)
Frame = +1
Query: 718 EALELLKTAIQAAGYPDKVVIGMDVAASEFYRNGKYDLDFKSPDDPSRHITGEKLGELYK 897
EALEL+K AI AGY +K+VIGMDVAASEFYR+GKYDLDFKSP DPSR+ITG++LG LY+
Sbjct: 222 EALELVKEAIDKAGYTEKIVIGMDVAASEFYRDGKYDLDFKSPTDPSRYITGDQLGALYQ 281
Query: 898 IFIR 909
F+R
Sbjct: 282 DFVR 285
>ref|NP_001419.1| alpha-enolase isoform 1 [Homo sapiens].
Length = 434
Score = 380 bits (975), Expect(3) = e-129
Identities = 188/220 (85%), Positives = 205/220 (93%)
Frame = +2
Query: 56 MAMQKIFAREILDSRGNPTVEVDLHTAKGRFRAAVPSGASTGIYEALELRDGDKSRYLGK 235
M++ KI AREI DSRGNPTVEVDL T+KG FRAAVPSGASTGIYEALELRD DK+RY+GK
Sbjct: 1 MSILKIHAREIFDSRGNPTVEVDLFTSKGLFRAAVPSGASTGIYEALELRDNDKTRYMGK 60
Query: 236 GVLKAVEHINKTLGPALLEKKLSVVDQEKVDKFMIELDGTENKSKFGANAILGVSLAVCK 415
GV KAVEHINKT+ PAL+ KKL+V +QEK+DK MIE+DGTENKSKFGANAILGVSLAVCK
Sbjct: 61 GVSKAVEHINKTIAPALVSKKLNVTEQEKIDKLMIEMDGTENKSKFGANAILGVSLAVCK 120
Query: 416 AGAAEKGVPLYRHIADLAGNPDLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFRE 595
AGA EKGVPLYRHIADLAGN +++LPVPAFNVINGGSHAGNKLAMQEFMILPVGA++FRE
Sbjct: 121 AGAVEKGVPLYRHIADLAGNSEVILPVPAFNVINGGSHAGNKLAMQEFMILPVGAANFRE 180
Query: 596 AMRIGAEVYHHLKGVIKGKYGKDATNVGDEGGFAPNILEN 715
AMRIGAEVYH+LK VIK KYGKDATNVGDEGGFAPNILEN
Sbjct: 181 AMRIGAEVYHNLKNVIKEKYGKDATNVGDEGGFAPNILEN 220
Score = 102 bits (253), Expect(3) = e-129
Identities = 49/64 (76%), Positives = 57/64 (89%)
Frame = +1
Query: 718 EALELLKTAIQAAGYPDKVVIGMDVAASEFYRNGKYDLDFKSPDDPSRHITGEKLGELYK 897
E LELLKTAI AGY DKVVIGMDVAASEF+R+GKYDLDFKSPDDPSR+I+ ++L +LYK
Sbjct: 222 EGLELLKTAIGKAGYTDKVVIGMDVAASEFFRSGKYDLDFKSPDDPSRYISPDQLADLYK 281
Query: 898 IFIR 909
FI+
Sbjct: 282 SFIK 285
Score = 22.7 bits (47), Expect(3) = e-129
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +3
Query: 894 QDFHQNYPVVSIGDP 938
+ F ++YPVVSI DP
Sbjct: 281 KSFIKDYPVVSIEDP 295
>ref|NP_001180432.1| beta-enolase isoform 2 [Homo sapiens].
Length = 391
Score = 326 bits (835), Expect(2) = e-121
Identities = 172/220 (78%), Positives = 175/220 (79%)
Frame = +2
Query: 56 MAMQKIFAREILDSRGNPTVEVDLHTAKGRFRAAVPSGASTGIYEALELRDGDKSRYLGK 235
MAMQKIFAREILDSRGNPTVEVDLHTAKGRFRAAVPSGASTGIYEALELRDGDK RYLGK
Sbjct: 1 MAMQKIFAREILDSRGNPTVEVDLHTAKGRFRAAVPSGASTGIYEALELRDGDKGRYLGK 60
Query: 236 GVLKAVEHINKTLGPALLEKKLSVVDQEKVDKFMIELDGTENKSKFGANAILGVSLAVCK 415
+KFGANAILGVSLAVCK
Sbjct: 61 -------------------------------------------AKFGANAILGVSLAVCK 77
Query: 416 AGAAEKGVPLYRHIADLAGNPDLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFRE 595
AGAAEKGVPLYRHIADLAGNPDL+LPVPAFNVINGGSHAGNKLAMQEFMILPVGASSF+E
Sbjct: 78 AGAAEKGVPLYRHIADLAGNPDLILPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKE 137
Query: 596 AMRIGAEVYHHLKGVIKGKYGKDATNVGDEGGFAPNILEN 715
AMRIGAEVYHHLKGVIK KYGKDATNVGDEGGFAPNILEN
Sbjct: 138 AMRIGAEVYHHLKGVIKAKYGKDATNVGDEGGFAPNILEN 177
Score = 127 bits (318), Expect(2) = e-121
Identities = 61/65 (93%), Positives = 64/65 (98%)
Frame = +1
Query: 715 HEALELLKTAIQAAGYPDKVVIGMDVAASEFYRNGKYDLDFKSPDDPSRHITGEKLGELY 894
+EALELLKTAIQAAGYPDKVVIGMDVAASEFYRNGKYDLDFKSPDDP+RHITGEKLGELY
Sbjct: 178 NEALELLKTAIQAAGYPDKVVIGMDVAASEFYRNGKYDLDFKSPDDPARHITGEKLGELY 237
Query: 895 KIFIR 909
K FI+
Sbjct: 238 KSFIK 242
>ref|NP_001188412.1| c-myc promoter-binding protein-1 isoform MBP-1 [Homo sapiens].
Length = 341
Score = 238 bits (606), Expect(3) = 3e-87
Identities = 116/127 (91%), Positives = 123/127 (96%)
Frame = +2
Query: 335 MIELDGTENKSKFGANAILGVSLAVCKAGAAEKGVPLYRHIADLAGNPDLVLPVPAFNVI 514
MIE+DGTENKSKFGANAILGVSLAVCKAGA EKGVPLYRHIADLAGN +++LPVPAFNVI
Sbjct: 1 MIEMDGTENKSKFGANAILGVSLAVCKAGAVEKGVPLYRHIADLAGNSEVILPVPAFNVI 60
Query: 515 NGGSHAGNKLAMQEFMILPVGASSFREAMRIGAEVYHHLKGVIKGKYGKDATNVGDEGGF 694
NGGSHAGNKLAMQEFMILPVGA++FREAMRIGAEVYH+LK VIK KYGKDATNVGDEGGF
Sbjct: 61 NGGSHAGNKLAMQEFMILPVGAANFREAMRIGAEVYHNLKNVIKEKYGKDATNVGDEGGF 120
Query: 695 APNILEN 715
APNILEN
Sbjct: 121 APNILEN 127
Score = 102 bits (253), Expect(3) = 3e-87
Identities = 49/64 (76%), Positives = 57/64 (89%)
Frame = +1
Query: 718 EALELLKTAIQAAGYPDKVVIGMDVAASEFYRNGKYDLDFKSPDDPSRHITGEKLGELYK 897
E LELLKTAI AGY DKVVIGMDVAASEF+R+GKYDLDFKSPDDPSR+I+ ++L +LYK
Sbjct: 129 EGLELLKTAIGKAGYTDKVVIGMDVAASEFFRSGKYDLDFKSPDDPSRYISPDQLADLYK 188
Query: 898 IFIR 909
FI+
Sbjct: 189 SFIK 192
Score = 22.7 bits (47), Expect(3) = 3e-87
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +3
Query: 894 QDFHQNYPVVSIGDP 938
+ F ++YPVVSI DP
Sbjct: 188 KSFIKDYPVVSIEDP 202
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 45,201,485
Number of extensions: 1465709
Number of successful extensions: 6338
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 6277
Number of HSP's successfully gapped: 15
Length of query: 313
Length of database: 18,297,164
Length adjustment: 102
Effective length of query: 211
Effective length of database: 14,934,836
Effective search space: 3151250396
Effective search space used: 3151250396
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-000932
(939 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_031959.1| beta-enolase isoform 1 [Mus musculus]. 431 e-151
Alignment gi|NP_001129534.1| beta-enolase isoform 2 [Mus musculus]. 431 e-151
Alignment gi|XP_003086461.1| PREDICTED: alpha-enolase-like isoform 8 [Mus... 385 e-133
Alignment gi|XP_003086460.1| PREDICTED: alpha-enolase-like isoform 7 [Mus... 385 e-133
Alignment gi|XP_003086596.1| PREDICTED: alpha-enolase-like [Mus musculus]. 384 e-133
Alignment gi|XP_003086457.1| PREDICTED: alpha-enolase-like isoform 4 [Mus... 384 e-133
Alignment gi|XP_003086458.1| PREDICTED: alpha-enolase-like isoform 5 [Mus... 384 e-133
Alignment gi|XP_003086455.1| PREDICTED: alpha-enolase-like isoform 2 [Mus... 384 e-133
Alignment gi|XP_003086454.1| PREDICTED: alpha-enolase-like isoform 1 [Mus... 384 e-133
Alignment gi|XP_003086459.1| PREDICTED: alpha-enolase-like isoform 6 [Mus... 384 e-133
>ref|NP_031959.1| beta-enolase isoform 1 [Mus musculus].
Length = 434
Score = 431 bits (1107), Expect(2) = e-151
Identities = 217/220 (98%), Positives = 219/220 (99%)
Frame = +2
Query: 56 MAMQKIFAREILDSRGNPTVEVDLHTAKGRFRAAVPSGASTGIYEALELRDGDKSRYLGK 235
MAMQKIFAREILDSRGNPTVEVDLHTAKGRFRAAVPSGASTGIYEALELRDGDK+RYLGK
Sbjct: 1 MAMQKIFAREILDSRGNPTVEVDLHTAKGRFRAAVPSGASTGIYEALELRDGDKARYLGK 60
Query: 236 GVLKAVEHINKTLGPALLEKKLSVVDQEKVDKFMIELDGTENKSKFGANAILGVSLAVCK 415
GVLKAVEHINKTLGPALLEKKLSVVDQEKVDKFMIELDGTENKSKFGANAILGVSLAVCK
Sbjct: 61 GVLKAVEHINKTLGPALLEKKLSVVDQEKVDKFMIELDGTENKSKFGANAILGVSLAVCK 120
Query: 416 AGAAEKGVPLYRHIADLAGNPDLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFRE 595
AGAAEKGVPLYRHIADLAGNPDLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSF+E
Sbjct: 121 AGAAEKGVPLYRHIADLAGNPDLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKE 180
Query: 596 AMRIGAEVYHHLKGVIKGKYGKDATNVGDEGGFAPNILEN 715
AMRIGAEVYHHLKGVIK KYGKDATNVGDEGGFAPNILEN
Sbjct: 181 AMRIGAEVYHHLKGVIKAKYGKDATNVGDEGGFAPNILEN 220
Score = 124 bits (312), Expect(2) = e-151
Identities = 60/65 (92%), Positives = 64/65 (98%)
Frame = +1
Query: 715 HEALELLKTAIQAAGYPDKVVIGMDVAASEFYRNGKYDLDFKSPDDPSRHITGEKLGELY 894
+EALELLKTAIQAAGYPDKVVIGMDVAASEFYRNGKYDLDFKSPDDP+RHI+GEKLGELY
Sbjct: 221 NEALELLKTAIQAAGYPDKVVIGMDVAASEFYRNGKYDLDFKSPDDPARHISGEKLGELY 280
Query: 895 KIFIR 909
K FI+
Sbjct: 281 KNFIQ 285
>ref|NP_001129534.1| beta-enolase isoform 2 [Mus musculus].
Length = 434
Score = 431 bits (1107), Expect(2) = e-151
Identities = 217/220 (98%), Positives = 219/220 (99%)
Frame = +2
Query: 56 MAMQKIFAREILDSRGNPTVEVDLHTAKGRFRAAVPSGASTGIYEALELRDGDKSRYLGK 235
MAMQKIFAREILDSRGNPTVEVDLHTAKGRFRAAVPSGASTGIYEALELRDGDK+RYLGK
Sbjct: 1 MAMQKIFAREILDSRGNPTVEVDLHTAKGRFRAAVPSGASTGIYEALELRDGDKARYLGK 60
Query: 236 GVLKAVEHINKTLGPALLEKKLSVVDQEKVDKFMIELDGTENKSKFGANAILGVSLAVCK 415
GVLKAVEHINKTLGPALLEKKLSVVDQEKVDKFMIELDGTENKSKFGANAILGVSLAVCK
Sbjct: 61 GVLKAVEHINKTLGPALLEKKLSVVDQEKVDKFMIELDGTENKSKFGANAILGVSLAVCK 120
Query: 416 AGAAEKGVPLYRHIADLAGNPDLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFRE 595
AGAAEKGVPLYRHIADLAGNPDLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSF+E
Sbjct: 121 AGAAEKGVPLYRHIADLAGNPDLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKE 180
Query: 596 AMRIGAEVYHHLKGVIKGKYGKDATNVGDEGGFAPNILEN 715
AMRIGAEVYHHLKGVIK KYGKDATNVGDEGGFAPNILEN
Sbjct: 181 AMRIGAEVYHHLKGVIKAKYGKDATNVGDEGGFAPNILEN 220
Score = 124 bits (312), Expect(2) = e-151
Identities = 60/65 (92%), Positives = 64/65 (98%)
Frame = +1
Query: 715 HEALELLKTAIQAAGYPDKVVIGMDVAASEFYRNGKYDLDFKSPDDPSRHITGEKLGELY 894
+EALELLKTAIQAAGYPDKVVIGMDVAASEFYRNGKYDLDFKSPDDP+RHI+GEKLGELY
Sbjct: 221 NEALELLKTAIQAAGYPDKVVIGMDVAASEFYRNGKYDLDFKSPDDPARHISGEKLGELY 280
Query: 895 KIFIR 909
K FI+
Sbjct: 281 KNFIQ 285
>ref|XP_003086461.1| PREDICTED: alpha-enolase-like isoform 8 [Mus musculus].
Length = 438
Score = 385 bits (989), Expect(3) = e-133
Identities = 190/221 (85%), Positives = 209/221 (94%)
Frame = +2
Query: 53 AMAMQKIFAREILDSRGNPTVEVDLHTAKGRFRAAVPSGASTGIYEALELRDGDKSRYLG 232
AM++ +I AREI DSRGNPTVEVDL+TAKG FRAAVPSGASTGIYEALELRD DK+R++G
Sbjct: 4 AMSILRIHAREIFDSRGNPTVEVDLYTAKGLFRAAVPSGASTGIYEALELRDNDKTRFMG 63
Query: 233 KGVLKAVEHINKTLGPALLEKKLSVVDQEKVDKFMIELDGTENKSKFGANAILGVSLAVC 412
KGV +AVEHINKT+ PAL+ KK++VV+QEK+DK MIE+DGTENKSKFGANAILGVSLAVC
Sbjct: 64 KGVSQAVEHINKTIAPALVSKKVNVVEQEKIDKLMIEMDGTENKSKFGANAILGVSLAVC 123
Query: 413 KAGAAEKGVPLYRHIADLAGNPDLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFR 592
KAGA EKGVPLYRHIADLAGNP+++LPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFR
Sbjct: 124 KAGAVEKGVPLYRHIADLAGNPEVILPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFR 183
Query: 593 EAMRIGAEVYHHLKGVIKGKYGKDATNVGDEGGFAPNILEN 715
EAMRIGAEVYH+LK VIK KYGKDATNVGDEGGFAPNILEN
Sbjct: 184 EAMRIGAEVYHNLKNVIKEKYGKDATNVGDEGGFAPNILEN 224
Score = 104 bits (260), Expect(3) = e-133
Identities = 50/64 (78%), Positives = 58/64 (90%)
Frame = +1
Query: 718 EALELLKTAIQAAGYPDKVVIGMDVAASEFYRNGKYDLDFKSPDDPSRHITGEKLGELYK 897
EALELLKTAI AGY D+VVIGMDVAASEFYR+GKYDLDFKSPDDPSR+IT ++L +LYK
Sbjct: 226 EALELLKTAIAKAGYTDQVVIGMDVAASEFYRSGKYDLDFKSPDDPSRYITPDQLADLYK 285
Query: 898 IFIR 909
F++
Sbjct: 286 SFVQ 289
Score = 26.2 bits (56), Expect(3) = e-133
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = +3
Query: 894 QDFHQNYPVVSIGDP 938
+ F QNYPVVSI DP
Sbjct: 285 KSFVQNYPVVSIEDP 299
>ref|XP_003086460.1| PREDICTED: alpha-enolase-like isoform 7 [Mus musculus].
Length = 438
Score = 385 bits (989), Expect(3) = e-133
Identities = 190/221 (85%), Positives = 209/221 (94%)
Frame = +2
Query: 53 AMAMQKIFAREILDSRGNPTVEVDLHTAKGRFRAAVPSGASTGIYEALELRDGDKSRYLG 232
AM++ +I AREI DSRGNPTVEVDL+TAKG FRAAVPSGASTGIYEALELRD DK+R++G
Sbjct: 4 AMSILRIHAREIFDSRGNPTVEVDLYTAKGLFRAAVPSGASTGIYEALELRDNDKTRFMG 63
Query: 233 KGVLKAVEHINKTLGPALLEKKLSVVDQEKVDKFMIELDGTENKSKFGANAILGVSLAVC 412
KGV +AVEHINKT+ PAL+ KK++VV+QEK+DK MIE+DGTENKSKFGANAILGVSLAVC
Sbjct: 64 KGVSQAVEHINKTIAPALVSKKVNVVEQEKIDKLMIEMDGTENKSKFGANAILGVSLAVC 123
Query: 413 KAGAAEKGVPLYRHIADLAGNPDLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFR 592
KAGA EKGVPLYRHIADLAGNP+++LPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFR
Sbjct: 124 KAGAVEKGVPLYRHIADLAGNPEVILPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFR 183
Query: 593 EAMRIGAEVYHHLKGVIKGKYGKDATNVGDEGGFAPNILEN 715
EAMRIGAEVYH+LK VIK KYGKDATNVGDEGGFAPNILEN
Sbjct: 184 EAMRIGAEVYHNLKNVIKEKYGKDATNVGDEGGFAPNILEN 224
Score = 104 bits (260), Expect(3) = e-133
Identities = 50/64 (78%), Positives = 58/64 (90%)
Frame = +1
Query: 718 EALELLKTAIQAAGYPDKVVIGMDVAASEFYRNGKYDLDFKSPDDPSRHITGEKLGELYK 897
EALELLKTAI AGY D+VVIGMDVAASEFYR+GKYDLDFKSPDDPSR+IT ++L +LYK
Sbjct: 226 EALELLKTAIAKAGYTDQVVIGMDVAASEFYRSGKYDLDFKSPDDPSRYITPDQLADLYK 285
Query: 898 IFIR 909
F++
Sbjct: 286 SFVQ 289
Score = 26.2 bits (56), Expect(3) = e-133
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = +3
Query: 894 QDFHQNYPVVSIGDP 938
+ F QNYPVVSI DP
Sbjct: 285 KSFVQNYPVVSIEDP 299
>ref|XP_003086596.1| PREDICTED: alpha-enolase-like [Mus musculus].
Length = 434
Score = 384 bits (985), Expect(3) = e-133
Identities = 189/220 (85%), Positives = 208/220 (94%)
Frame = +2
Query: 56 MAMQKIFAREILDSRGNPTVEVDLHTAKGRFRAAVPSGASTGIYEALELRDGDKSRYLGK 235
M++ +I AREI DSRGNPTVEVDL+TAKG FRAAVPSGASTGIYEALELRD DK+R++GK
Sbjct: 1 MSILRIHAREIFDSRGNPTVEVDLYTAKGLFRAAVPSGASTGIYEALELRDNDKTRFMGK 60
Query: 236 GVLKAVEHINKTLGPALLEKKLSVVDQEKVDKFMIELDGTENKSKFGANAILGVSLAVCK 415
GV +AVEHINKT+ PAL+ KK++VV+QEK+DK MIE+DGTENKSKFGANAILGVSLAVCK
Sbjct: 61 GVSQAVEHINKTIAPALVSKKVNVVEQEKIDKLMIEMDGTENKSKFGANAILGVSLAVCK 120
Query: 416 AGAAEKGVPLYRHIADLAGNPDLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFRE 595
AGA EKGVPLYRHIADLAGNP+++LPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFRE
Sbjct: 121 AGAVEKGVPLYRHIADLAGNPEVILPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFRE 180
Query: 596 AMRIGAEVYHHLKGVIKGKYGKDATNVGDEGGFAPNILEN 715
AMRIGAEVYH+LK VIK KYGKDATNVGDEGGFAPNILEN
Sbjct: 181 AMRIGAEVYHNLKNVIKEKYGKDATNVGDEGGFAPNILEN 220
Score = 104 bits (260), Expect(3) = e-133
Identities = 50/64 (78%), Positives = 58/64 (90%)
Frame = +1
Query: 718 EALELLKTAIQAAGYPDKVVIGMDVAASEFYRNGKYDLDFKSPDDPSRHITGEKLGELYK 897
EALELLKTAI AGY D+VVIGMDVAASEFYR+GKYDLDFKSPDDPSR+IT ++L +LYK
Sbjct: 222 EALELLKTAIAKAGYTDQVVIGMDVAASEFYRSGKYDLDFKSPDDPSRYITPDQLADLYK 281
Query: 898 IFIR 909
F++
Sbjct: 282 SFVQ 285
Score = 26.2 bits (56), Expect(3) = e-133
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = +3
Query: 894 QDFHQNYPVVSIGDP 938
+ F QNYPVVSI DP
Sbjct: 281 KSFVQNYPVVSIEDP 295
>ref|XP_003086457.1| PREDICTED: alpha-enolase-like isoform 4 [Mus musculus].
Length = 434
Score = 384 bits (985), Expect(3) = e-133
Identities = 189/220 (85%), Positives = 208/220 (94%)
Frame = +2
Query: 56 MAMQKIFAREILDSRGNPTVEVDLHTAKGRFRAAVPSGASTGIYEALELRDGDKSRYLGK 235
M++ +I AREI DSRGNPTVEVDL+TAKG FRAAVPSGASTGIYEALELRD DK+R++GK
Sbjct: 1 MSILRIHAREIFDSRGNPTVEVDLYTAKGLFRAAVPSGASTGIYEALELRDNDKTRFMGK 60
Query: 236 GVLKAVEHINKTLGPALLEKKLSVVDQEKVDKFMIELDGTENKSKFGANAILGVSLAVCK 415
GV +AVEHINKT+ PAL+ KK++VV+QEK+DK MIE+DGTENKSKFGANAILGVSLAVCK
Sbjct: 61 GVSQAVEHINKTIAPALVSKKVNVVEQEKIDKLMIEMDGTENKSKFGANAILGVSLAVCK 120
Query: 416 AGAAEKGVPLYRHIADLAGNPDLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFRE 595
AGA EKGVPLYRHIADLAGNP+++LPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFRE
Sbjct: 121 AGAVEKGVPLYRHIADLAGNPEVILPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFRE 180
Query: 596 AMRIGAEVYHHLKGVIKGKYGKDATNVGDEGGFAPNILEN 715
AMRIGAEVYH+LK VIK KYGKDATNVGDEGGFAPNILEN
Sbjct: 181 AMRIGAEVYHNLKNVIKEKYGKDATNVGDEGGFAPNILEN 220
Score = 104 bits (260), Expect(3) = e-133
Identities = 50/64 (78%), Positives = 58/64 (90%)
Frame = +1
Query: 718 EALELLKTAIQAAGYPDKVVIGMDVAASEFYRNGKYDLDFKSPDDPSRHITGEKLGELYK 897
EALELLKTAI AGY D+VVIGMDVAASEFYR+GKYDLDFKSPDDPSR+IT ++L +LYK
Sbjct: 222 EALELLKTAIAKAGYTDQVVIGMDVAASEFYRSGKYDLDFKSPDDPSRYITPDQLADLYK 281
Query: 898 IFIR 909
F++
Sbjct: 282 SFVQ 285
Score = 26.2 bits (56), Expect(3) = e-133
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = +3
Query: 894 QDFHQNYPVVSIGDP 938
+ F QNYPVVSI DP
Sbjct: 281 KSFVQNYPVVSIEDP 295
>ref|XP_003086458.1| PREDICTED: alpha-enolase-like isoform 5 [Mus musculus].
Length = 434
Score = 384 bits (985), Expect(3) = e-133
Identities = 189/220 (85%), Positives = 208/220 (94%)
Frame = +2
Query: 56 MAMQKIFAREILDSRGNPTVEVDLHTAKGRFRAAVPSGASTGIYEALELRDGDKSRYLGK 235
M++ +I AREI DSRGNPTVEVDL+TAKG FRAAVPSGASTGIYEALELRD DK+R++GK
Sbjct: 1 MSILRIHAREIFDSRGNPTVEVDLYTAKGLFRAAVPSGASTGIYEALELRDNDKTRFMGK 60
Query: 236 GVLKAVEHINKTLGPALLEKKLSVVDQEKVDKFMIELDGTENKSKFGANAILGVSLAVCK 415
GV +AVEHINKT+ PAL+ KK++VV+QEK+DK MIE+DGTENKSKFGANAILGVSLAVCK
Sbjct: 61 GVSQAVEHINKTIAPALVSKKVNVVEQEKIDKLMIEMDGTENKSKFGANAILGVSLAVCK 120
Query: 416 AGAAEKGVPLYRHIADLAGNPDLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFRE 595
AGA EKGVPLYRHIADLAGNP+++LPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFRE
Sbjct: 121 AGAVEKGVPLYRHIADLAGNPEVILPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFRE 180
Query: 596 AMRIGAEVYHHLKGVIKGKYGKDATNVGDEGGFAPNILEN 715
AMRIGAEVYH+LK VIK KYGKDATNVGDEGGFAPNILEN
Sbjct: 181 AMRIGAEVYHNLKNVIKEKYGKDATNVGDEGGFAPNILEN 220
Score = 104 bits (260), Expect(3) = e-133
Identities = 50/64 (78%), Positives = 58/64 (90%)
Frame = +1
Query: 718 EALELLKTAIQAAGYPDKVVIGMDVAASEFYRNGKYDLDFKSPDDPSRHITGEKLGELYK 897
EALELLKTAI AGY D+VVIGMDVAASEFYR+GKYDLDFKSPDDPSR+IT ++L +LYK
Sbjct: 222 EALELLKTAIAKAGYTDQVVIGMDVAASEFYRSGKYDLDFKSPDDPSRYITPDQLADLYK 281
Query: 898 IFIR 909
F++
Sbjct: 282 SFVQ 285
Score = 26.2 bits (56), Expect(3) = e-133
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = +3
Query: 894 QDFHQNYPVVSIGDP 938
+ F QNYPVVSI DP
Sbjct: 281 KSFVQNYPVVSIEDP 295
>ref|XP_003086455.1| PREDICTED: alpha-enolase-like isoform 2 [Mus musculus].
Length = 434
Score = 384 bits (985), Expect(3) = e-133
Identities = 189/220 (85%), Positives = 208/220 (94%)
Frame = +2
Query: 56 MAMQKIFAREILDSRGNPTVEVDLHTAKGRFRAAVPSGASTGIYEALELRDGDKSRYLGK 235
M++ +I AREI DSRGNPTVEVDL+TAKG FRAAVPSGASTGIYEALELRD DK+R++GK
Sbjct: 1 MSILRIHAREIFDSRGNPTVEVDLYTAKGLFRAAVPSGASTGIYEALELRDNDKTRFMGK 60
Query: 236 GVLKAVEHINKTLGPALLEKKLSVVDQEKVDKFMIELDGTENKSKFGANAILGVSLAVCK 415
GV +AVEHINKT+ PAL+ KK++VV+QEK+DK MIE+DGTENKSKFGANAILGVSLAVCK
Sbjct: 61 GVSQAVEHINKTIAPALVSKKVNVVEQEKIDKLMIEMDGTENKSKFGANAILGVSLAVCK 120
Query: 416 AGAAEKGVPLYRHIADLAGNPDLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFRE 595
AGA EKGVPLYRHIADLAGNP+++LPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFRE
Sbjct: 121 AGAVEKGVPLYRHIADLAGNPEVILPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFRE 180
Query: 596 AMRIGAEVYHHLKGVIKGKYGKDATNVGDEGGFAPNILEN 715
AMRIGAEVYH+LK VIK KYGKDATNVGDEGGFAPNILEN
Sbjct: 181 AMRIGAEVYHNLKNVIKEKYGKDATNVGDEGGFAPNILEN 220
Score = 104 bits (260), Expect(3) = e-133
Identities = 50/64 (78%), Positives = 58/64 (90%)
Frame = +1
Query: 718 EALELLKTAIQAAGYPDKVVIGMDVAASEFYRNGKYDLDFKSPDDPSRHITGEKLGELYK 897
EALELLKTAI AGY D+VVIGMDVAASEFYR+GKYDLDFKSPDDPSR+IT ++L +LYK
Sbjct: 222 EALELLKTAIAKAGYTDQVVIGMDVAASEFYRSGKYDLDFKSPDDPSRYITPDQLADLYK 281
Query: 898 IFIR 909
F++
Sbjct: 282 SFVQ 285
Score = 26.2 bits (56), Expect(3) = e-133
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = +3
Query: 894 QDFHQNYPVVSIGDP 938
+ F QNYPVVSI DP
Sbjct: 281 KSFVQNYPVVSIEDP 295
>ref|XP_003086454.1| PREDICTED: alpha-enolase-like isoform 1 [Mus musculus].
Length = 434
Score = 384 bits (985), Expect(3) = e-133
Identities = 189/220 (85%), Positives = 208/220 (94%)
Frame = +2
Query: 56 MAMQKIFAREILDSRGNPTVEVDLHTAKGRFRAAVPSGASTGIYEALELRDGDKSRYLGK 235
M++ +I AREI DSRGNPTVEVDL+TAKG FRAAVPSGASTGIYEALELRD DK+R++GK
Sbjct: 1 MSILRIHAREIFDSRGNPTVEVDLYTAKGLFRAAVPSGASTGIYEALELRDNDKTRFMGK 60
Query: 236 GVLKAVEHINKTLGPALLEKKLSVVDQEKVDKFMIELDGTENKSKFGANAILGVSLAVCK 415
GV +AVEHINKT+ PAL+ KK++VV+QEK+DK MIE+DGTENKSKFGANAILGVSLAVCK
Sbjct: 61 GVSQAVEHINKTIAPALVSKKVNVVEQEKIDKLMIEMDGTENKSKFGANAILGVSLAVCK 120
Query: 416 AGAAEKGVPLYRHIADLAGNPDLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFRE 595
AGA EKGVPLYRHIADLAGNP+++LPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFRE
Sbjct: 121 AGAVEKGVPLYRHIADLAGNPEVILPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFRE 180
Query: 596 AMRIGAEVYHHLKGVIKGKYGKDATNVGDEGGFAPNILEN 715
AMRIGAEVYH+LK VIK KYGKDATNVGDEGGFAPNILEN
Sbjct: 181 AMRIGAEVYHNLKNVIKEKYGKDATNVGDEGGFAPNILEN 220
Score = 104 bits (260), Expect(3) = e-133
Identities = 50/64 (78%), Positives = 58/64 (90%)
Frame = +1
Query: 718 EALELLKTAIQAAGYPDKVVIGMDVAASEFYRNGKYDLDFKSPDDPSRHITGEKLGELYK 897
EALELLKTAI AGY D+VVIGMDVAASEFYR+GKYDLDFKSPDDPSR+IT ++L +LYK
Sbjct: 222 EALELLKTAIAKAGYTDQVVIGMDVAASEFYRSGKYDLDFKSPDDPSRYITPDQLADLYK 281
Query: 898 IFIR 909
F++
Sbjct: 282 SFVQ 285
Score = 26.2 bits (56), Expect(3) = e-133
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = +3
Query: 894 QDFHQNYPVVSIGDP 938
+ F QNYPVVSI DP
Sbjct: 281 KSFVQNYPVVSIEDP 295
>ref|XP_003086459.1| PREDICTED: alpha-enolase-like isoform 6 [Mus musculus].
Length = 434
Score = 384 bits (985), Expect(3) = e-133
Identities = 189/220 (85%), Positives = 208/220 (94%)
Frame = +2
Query: 56 MAMQKIFAREILDSRGNPTVEVDLHTAKGRFRAAVPSGASTGIYEALELRDGDKSRYLGK 235
M++ +I AREI DSRGNPTVEVDL+TAKG FRAAVPSGASTGIYEALELRD DK+R++GK
Sbjct: 1 MSILRIHAREIFDSRGNPTVEVDLYTAKGLFRAAVPSGASTGIYEALELRDNDKTRFMGK 60
Query: 236 GVLKAVEHINKTLGPALLEKKLSVVDQEKVDKFMIELDGTENKSKFGANAILGVSLAVCK 415
GV +AVEHINKT+ PAL+ KK++VV+QEK+DK MIE+DGTENKSKFGANAILGVSLAVCK
Sbjct: 61 GVSQAVEHINKTIAPALVSKKVNVVEQEKIDKLMIEMDGTENKSKFGANAILGVSLAVCK 120
Query: 416 AGAAEKGVPLYRHIADLAGNPDLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFRE 595
AGA EKGVPLYRHIADLAGNP+++LPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFRE
Sbjct: 121 AGAVEKGVPLYRHIADLAGNPEVILPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFRE 180
Query: 596 AMRIGAEVYHHLKGVIKGKYGKDATNVGDEGGFAPNILEN 715
AMRIGAEVYH+LK VIK KYGKDATNVGDEGGFAPNILEN
Sbjct: 181 AMRIGAEVYHNLKNVIKEKYGKDATNVGDEGGFAPNILEN 220
Score = 104 bits (260), Expect(3) = e-133
Identities = 50/64 (78%), Positives = 58/64 (90%)
Frame = +1
Query: 718 EALELLKTAIQAAGYPDKVVIGMDVAASEFYRNGKYDLDFKSPDDPSRHITGEKLGELYK 897
EALELLKTAI AGY D+VVIGMDVAASEFYR+GKYDLDFKSPDDPSR+IT ++L +LYK
Sbjct: 222 EALELLKTAIAKAGYTDQVVIGMDVAASEFYRSGKYDLDFKSPDDPSRYITPDQLADLYK 281
Query: 898 IFIR 909
F++
Sbjct: 282 SFVQ 285
Score = 26.2 bits (56), Expect(3) = e-133
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = +3
Query: 894 QDFHQNYPVVSIGDP 938
+ F QNYPVVSI DP
Sbjct: 281 KSFVQNYPVVSIEDP 295
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 37,990,537
Number of extensions: 1206688
Number of successful extensions: 4956
Number of sequences better than 1.0e-05: 18
Number of HSP's gapped: 4917
Number of HSP's successfully gapped: 51
Length of query: 313
Length of database: 15,617,559
Length adjustment: 101
Effective length of query: 212
Effective length of database: 12,583,923
Effective search space: 2667791676
Effective search space used: 2667791676
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-000932
(939 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001037992.1| beta-enolase [Sus scrofa]. 435 e-154
Alignment gi|XP_001925764.3| PREDICTED: gamma-enolase isoform 1 [Sus scro... 379 e-129
Alignment gi|XP_003355643.1| PREDICTED: gamma-enolase isoform 2 [Sus scro... 298 e-105
>ref|NP_001037992.1| beta-enolase [Sus scrofa].
Length = 434
Score = 435 bits (1119), Expect(2) = e-154
Identities = 220/220 (100%), Positives = 220/220 (100%)
Frame = +2
Query: 56 MAMQKIFAREILDSRGNPTVEVDLHTAKGRFRAAVPSGASTGIYEALELRDGDKSRYLGK 235
MAMQKIFAREILDSRGNPTVEVDLHTAKGRFRAAVPSGASTGIYEALELRDGDKSRYLGK
Sbjct: 1 MAMQKIFAREILDSRGNPTVEVDLHTAKGRFRAAVPSGASTGIYEALELRDGDKSRYLGK 60
Query: 236 GVLKAVEHINKTLGPALLEKKLSVVDQEKVDKFMIELDGTENKSKFGANAILGVSLAVCK 415
GVLKAVEHINKTLGPALLEKKLSVVDQEKVDKFMIELDGTENKSKFGANAILGVSLAVCK
Sbjct: 61 GVLKAVEHINKTLGPALLEKKLSVVDQEKVDKFMIELDGTENKSKFGANAILGVSLAVCK 120
Query: 416 AGAAEKGVPLYRHIADLAGNPDLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFRE 595
AGAAEKGVPLYRHIADLAGNPDLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFRE
Sbjct: 121 AGAAEKGVPLYRHIADLAGNPDLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFRE 180
Query: 596 AMRIGAEVYHHLKGVIKGKYGKDATNVGDEGGFAPNILEN 715
AMRIGAEVYHHLKGVIKGKYGKDATNVGDEGGFAPNILEN
Sbjct: 181 AMRIGAEVYHHLKGVIKGKYGKDATNVGDEGGFAPNILEN 220
Score = 128 bits (321), Expect(2) = e-154
Identities = 62/65 (95%), Positives = 64/65 (98%)
Frame = +1
Query: 715 HEALELLKTAIQAAGYPDKVVIGMDVAASEFYRNGKYDLDFKSPDDPSRHITGEKLGELY 894
+EALELLKTAIQAAGYPDKVVIGMDVAASEFYRNGKYDLDFKSPDDPSRHITGEKLGELY
Sbjct: 221 NEALELLKTAIQAAGYPDKVVIGMDVAASEFYRNGKYDLDFKSPDDPSRHITGEKLGELY 280
Query: 895 KIFIR 909
K FI+
Sbjct: 281 KSFIK 285
>ref|XP_001925764.3| PREDICTED: gamma-enolase isoform 1 [Sus scrofa].
Length = 434
Score = 379 bits (973), Expect(2) = e-129
Identities = 188/220 (85%), Positives = 205/220 (93%)
Frame = +2
Query: 56 MAMQKIFAREILDSRGNPTVEVDLHTAKGRFRAAVPSGASTGIYEALELRDGDKSRYLGK 235
M+++KI+AREILDSRGNPTVEVDL+TAKG FRAAVPSGASTGIYEALELRDGDK RYLGK
Sbjct: 1 MSIEKIWAREILDSRGNPTVEVDLYTAKGLFRAAVPSGASTGIYEALELRDGDKQRYLGK 60
Query: 236 GVLKAVEHINKTLGPALLEKKLSVVDQEKVDKFMIELDGTENKSKFGANAILGVSLAVCK 415
GVLKAV+HIN T+ PAL+ LSVV+QEK+D M++LDGTENKSKFGANAILGVSLAVCK
Sbjct: 61 GVLKAVDHINTTIAPALVSSGLSVVEQEKLDNLMLDLDGTENKSKFGANAILGVSLAVCK 120
Query: 416 AGAAEKGVPLYRHIADLAGNPDLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFRE 595
AGAAE+ +PLYRHIA LAGN DL+LPVPAFNVINGGSHAGNKLAMQEFMILPVGA SFR+
Sbjct: 121 AGAAERDLPLYRHIAQLAGNSDLILPVPAFNVINGGSHAGNKLAMQEFMILPVGAESFRD 180
Query: 596 AMRIGAEVYHHLKGVIKGKYGKDATNVGDEGGFAPNILEN 715
AMR+GAEVYH LKGVIK KYGKDATNVGDEGGFAPNILEN
Sbjct: 181 AMRLGAEVYHTLKGVIKDKYGKDATNVGDEGGFAPNILEN 220
Score = 102 bits (253), Expect(2) = e-129
Identities = 48/64 (75%), Positives = 57/64 (89%)
Frame = +1
Query: 718 EALELLKTAIQAAGYPDKVVIGMDVAASEFYRNGKYDLDFKSPDDPSRHITGEKLGELYK 897
EALEL+K AI AGY +K+VIGMDVAASEFYR+GKYDLDFKSP DPSR+ITG++LG LY+
Sbjct: 222 EALELVKEAIDKAGYTEKIVIGMDVAASEFYRDGKYDLDFKSPADPSRYITGDQLGALYQ 281
Query: 898 IFIR 909
F+R
Sbjct: 282 DFVR 285
>ref|XP_003355643.1| PREDICTED: gamma-enolase isoform 2 [Sus scrofa].
Length = 391
Score = 298 bits (763), Expect(2) = e-105
Identities = 158/220 (71%), Positives = 169/220 (76%)
Frame = +2
Query: 56 MAMQKIFAREILDSRGNPTVEVDLHTAKGRFRAAVPSGASTGIYEALELRDGDKSRYLGK 235
M+++KI+AREILDSRGNPTVEVDL+TAKG FRAAVPSGASTGIYEALELRDGDK RYLGK
Sbjct: 1 MSIEKIWAREILDSRGNPTVEVDLYTAKGLFRAAVPSGASTGIYEALELRDGDKQRYLGK 60
Query: 236 GVLKAVEHINKTLGPALLEKKLSVVDQEKVDKFMIELDGTENKSKFGANAILGVSLAVCK 415
+KFGANAILGVSLAVCK
Sbjct: 61 -------------------------------------------AKFGANAILGVSLAVCK 77
Query: 416 AGAAEKGVPLYRHIADLAGNPDLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFRE 595
AGAAE+ +PLYRHIA LAGN DL+LPVPAFNVINGGSHAGNKLAMQEFMILPVGA SFR+
Sbjct: 78 AGAAERDLPLYRHIAQLAGNSDLILPVPAFNVINGGSHAGNKLAMQEFMILPVGAESFRD 137
Query: 596 AMRIGAEVYHHLKGVIKGKYGKDATNVGDEGGFAPNILEN 715
AMR+GAEVYH LKGVIK KYGKDATNVGDEGGFAPNILEN
Sbjct: 138 AMRLGAEVYHTLKGVIKDKYGKDATNVGDEGGFAPNILEN 177
Score = 102 bits (253), Expect(2) = e-105
Identities = 48/64 (75%), Positives = 57/64 (89%)
Frame = +1
Query: 718 EALELLKTAIQAAGYPDKVVIGMDVAASEFYRNGKYDLDFKSPDDPSRHITGEKLGELYK 897
EALEL+K AI AGY +K+VIGMDVAASEFYR+GKYDLDFKSP DPSR+ITG++LG LY+
Sbjct: 179 EALELVKEAIDKAGYTEKIVIGMDVAASEFYRDGKYDLDFKSPADPSRYITGDQLGALYQ 238
Query: 898 IFIR 909
F+R
Sbjct: 239 DFVR 242
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 28,606,579
Number of extensions: 944875
Number of successful extensions: 4097
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 4053
Number of HSP's successfully gapped: 7
Length of query: 313
Length of database: 11,343,932
Length adjustment: 99
Effective length of query: 214
Effective length of database: 8,879,129
Effective search space: 1900133606
Effective search space used: 1900133606
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 33 (17.3 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-000932
(939 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr12 430 e-118
Sscrofa_Chr06 170 9e-40
Sscrofa_Chr05 141 8e-31
>Sscrofa_Chr12
|| Length = 63588571
Score = 430 bits (217), Expect = e-118
Identities = 217/217 (100%)
Strand = Plus / Minus
Query: 500 gccttcaatgtgatcaatgggggttcccatgcgggaaataagctggccatgcaggagttc 559
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 54025414 gccttcaatgtgatcaatgggggttcccatgcgggaaataagctggccatgcaggagttc 54025355
Query: 560 atgatcctgcctgtgggagccagctccttcagggaagccatgcgcatcggcgccgaggtc 619
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 54025354 atgatcctgcctgtgggagccagctccttcagggaagccatgcgcatcggcgccgaggtc 54025295
Query: 620 taccaccacctcaagggggtcatcaagggcaaatacgggaaggacgccaccaatgtggga 679
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 54025294 taccaccacctcaagggggtcatcaagggcaaatacgggaaggacgccaccaatgtggga 54025235
Query: 680 gatgagggcggctttgcacccaacatcctggagaaca 716
|||||||||||||||||||||||||||||||||||||
Sbjct: 54025234 gatgagggcggctttgcacccaacatcctggagaaca 54025198
Score = 357 bits (180), Expect = 7e-96
Identities = 196/200 (98%), Gaps = 1/200 (0%)
Strand = Plus / Minus
Query: 720 agccctggagctgctgaagacggccatccaagcagctggttaccccgacaaggtggtgat 779
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 54025102 agccctggagctgctgaagacggccatccaggcagctggttaccccgacaaggtggtgat 54025043
Query: 780 cggcatggatgtggccgcatctgagttctaccgcaacgggaagtatgatctcgacttcaa 839
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 54025042 cggcatggatgtggcggcatctgagttctaccgcaacgggaagtatgatctcgacttcaa 54024983
Query: 840 gtcacctgacgacccctcccggcacatcaccggggagaagctgggggagctgtacaagat 899
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 54024982 gtcacctgacgacccctcccggcacatcaccggggagaagctgggggagctgtacaagag 54024923
Query: 900 tttcatc-agaactatcctg 918
||||||| ||||||||||||
Sbjct: 54024922 tttcatcaagaactatcctg 54024903
Score = 268 bits (135), Expect = 5e-69
Identities = 135/135 (100%)
Strand = Plus / Minus
Query: 366 ccaagtttggggccaatgccatcctgggcgtgtccctggctgtgtgcaaggccggagcag 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 54026704 ccaagtttggggccaatgccatcctgggcgtgtccctggctgtgtgcaaggccggagcag 54026645
Query: 426 ccgagaagggggtcccactctaccgtcacattgcagatctcgccggcaacccagacctgg 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 54026644 ccgagaagggggtcccactctaccgtcacattgcagatctcgccggcaacccagacctgg 54026585
Query: 486 tcctccccgtccctg 500
|||||||||||||||
Sbjct: 54026584 tcctccccgtccctg 54026570
Score = 194 bits (98), Expect = 6e-47
Identities = 98/98 (100%)
Strand = Plus / Minus
Query: 140 ggccgattccgagctgctgtgcccagcggggcttccacgggtatctatgaagctctagaa 199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 54027681 ggccgattccgagctgctgtgcccagcggggcttccacgggtatctatgaagctctagaa 54027622
Query: 200 ctgagagatggagacaaatctcgctacctgggcaaagg 237
||||||||||||||||||||||||||||||||||||||
Sbjct: 54027621 ctgagagatggagacaaatctcgctacctgggcaaagg 54027584
Score = 180 bits (91), Expect = 9e-43
Identities = 91/91 (100%)
Strand = Plus / Minus
Query: 51 cagccatggccatgcagaaaatctttgcccgcgaaatcctggactccaggggcaacccca 110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 54028040 cagccatggccatgcagaaaatctttgcccgcgaaatcctggactccaggggcaacccca 54027981
Query: 111 cagtggaggtggacctgcacacggccaaggg 141
|||||||||||||||||||||||||||||||
Sbjct: 54027980 cagtggaggtggacctgcacacggccaaggg 54027950
Score = 143 bits (72), Expect = 2e-31
Identities = 72/72 (100%)
Strand = Plus / Minus
Query: 294 agaaactaagtgtggtggatcaagaaaaagtggacaaatttatgatcgagctggatggga 353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 54027173 agaaactaagtgtggtggatcaagaaaaagtggacaaatttatgatcgagctggatggga 54027114
Query: 354 cagaaaataagt 365
||||||||||||
Sbjct: 54027113 cagaaaataagt 54027102
Score = 121 bits (61), Expect = 7e-25
Identities = 61/61 (100%)
Strand = Plus / Minus
Query: 235 aggggtcctgaaggctgtggaacacatcaacaagactctgggccccgcgctgctggaaaa 294
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 54027417 aggggtcctgaaggctgtggaacacatcaacaagactctgggccccgcgctgctggaaaa 54027358
Query: 295 g 295
|
Sbjct: 54027357 g 54027357
Score = 105 bits (53), Expect = 4e-20
Identities = 53/53 (100%)
Strand = Plus / Minus
Query: 1 tgacactgtcccagctgccacctctactccggagcccagcgaagacatcccag 53
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 54028702 tgacactgtcccagctgccacctctactccggagcccagcgaagacatcccag 54028650
>Sscrofa_Chr06
|| Length = 157765593
Score = 170 bits (86), Expect = 9e-40
Identities = 155/178 (87%)
Strand = Plus / Plus
Query: 539 aagctggccatgcaggagttcatgatcctgcctgtgggagccagctccttcagggaagcc 598
||||||||||||||||||||||||||||| || || || ||| ||||| |||| |||
Sbjct: 63746705 aagctggccatgcaggagttcatgatcctccccgtcggggccgaaaccttccgggaggcc 63746764
Query: 599 atgcgcatcggcgccgaggtctaccaccacctcaagggggtcatcaagggcaaatacggg 658
||||||||||| || |||||||||||| |||| ||| |||||||||| |||||||||
Sbjct: 63746765 atgcgcatcggggctgaggtctaccacaacctgaagaacgtcatcaaggagaaatacggg 63746824
Query: 659 aaggacgccaccaatgtgggagatgagggcggctttgcacccaacatcctggagaaca 716
|||||||||||||| ||||| ||||||||||| ||||| |||||||||||||||||||
Sbjct: 63746825 aaggacgccaccaacgtgggcgatgagggcgggtttgctcccaacatcctggagaaca 63746882
Score = 77.8 bits (39), Expect = 1e-11
Identities = 78/91 (85%)
Strand = Plus / Plus
Query: 366 ccaagtttggggccaatgccatcctgggcgtgtccctggctgtgtgcaaggccggagcag 425
|||||||||| ||||| ||||||||||||||||||||||| || |||||||| || || |
Sbjct: 63746187 ccaagtttggtgccaacgccatcctgggcgtgtccctggccgtctgcaaggctggcgctg 63746246
Query: 426 ccgagaagggggtcccactctaccgtcacat 456
||||||||||| || || ||||| |||||
Sbjct: 63746247 ttgagaagggggtgcccctgtaccgccacat 63746277
Score = 63.9 bits (32), Expect = 1e-07
Identities = 77/92 (83%)
Strand = Plus / Plus
Query: 764 ccgacaaggtggtgatcggcatggatgtggccgcatctgagttctaccgcaacgggaagt 823
|||||||||| || ||||||||||| |||||||| || ||||||||| | || ||||
Sbjct: 63748196 ccgacaaggtcgtcatcggcatggacgtggccgcctcggagttctacaggtcgggcaagt 63748255
Query: 824 atgatctcgacttcaagtcacctgacgacccc 855
| || || |||||||||||||| |||||||||
Sbjct: 63748256 acgacctggacttcaagtcacccgacgacccc 63748287
>Sscrofa_Chr05
|| Length = 111506441
Score = 141 bits (71), Expect = 8e-31
Identities = 179/215 (83%)
Strand = Plus / Minus
Query: 500 gccttcaatgtgatcaatgggggttcccatgcgggaaataagctggccatgcaggagttc 559
||||||||||||||||| || || || ||||| || || |||||||||||||||||||||
Sbjct: 66242190 gccttcaatgtgatcaacggtggctctcatgctgggaacaagctggccatgcaggagttc 66242131
Query: 560 atgatcctgcctgtgggagccagctccttcagggaagccatgcgcatcggcgccgaggtc 619
||||| || || ||||| || |||| |||| ||||||||| |||| || ||||||
Sbjct: 66242130 atgattctcccggtgggcgctgagagcttccgggatgccatgcgcctcggggcagaggtc 66242071
Query: 620 taccaccacctcaagggggtcatcaagggcaaatacgggaaggacgccaccaatgtggga 679
|||||| |||||||| |||||||||| ||| || || ||||| |||||||| ||||||
Sbjct: 66242070 taccacacgctcaagggtgtcatcaaggacaagtatggcaaggatgccaccaacgtggga 66242011
Query: 680 gatgagggcggctttgcacccaacatcctggagaa 714
|| || ||||||||||| ||||| |||||||||||
Sbjct: 66242010 gacgaaggcggctttgcccccaatatcctggagaa 66241976
Score = 79.8 bits (40), Expect = 2e-12
Identities = 49/52 (94%)
Strand = Plus / Minus
Query: 366 ccaagtttggggccaatgccatcctgggcgtgtccctggctgtgtgcaaggc 417
|||||||||||||||||||||||||||| |||||| |||||||||| |||||
Sbjct: 66242559 ccaagtttggggccaatgccatcctgggtgtgtccttggctgtgtgtaaggc 66242508
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 25,161,575
Number of extensions: 144
Number of successful extensions: 144
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 142
Number of HSP's successfully gapped: 14
Length of query: 939
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 918
Effective length of database: 2,808,413,156
Effective search space: 2578123277208
Effective search space used: 2578123277208
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 29 (58.0 bits)