Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-001005
(1963 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001039917.1| dual specificity protein phosphatase 1 [Bos ... 707 0.0
Alignment gi|NP_001193882.1| dual specificity phosphatase 4 [Bos taurus]. 454 e-127
Alignment gi|NP_001179108.1| dual specificity protein phosphatase 2 [Bos ... 310 3e-84
Alignment gi|XP_002691177.1| PREDICTED: dual specificity phosphatase 2-li... 310 3e-84
Alignment gi|NP_001094764.2| dual specificity protein phosphatase 7 [Bos ... 179 8e-45
Alignment gi|NP_001039660.1| dual specificity protein phosphatase 6 [Bos ... 166 7e-41
Alignment gi|XP_002698743.1| PREDICTED: hypothetical protein [Bos taurus]. 125 5e-40
Alignment gi|NP_001179956.1| dual specificity protein phosphatase 9 [Bos ... 162 8e-40
Alignment gi|XP_002699788.1| PREDICTED: dual specificity phosphatase 9-li... 162 8e-40
Alignment gi|XP_002687822.1| PREDICTED: dual specificity phosphatase 8-li... 159 8e-39
>ref|NP_001039917.1| dual specificity protein phosphatase 1 [Bos taurus].
Length = 367
Score = 707 bits (1824), Expect = 0.0
Identities = 357/367 (97%), Positives = 358/367 (97%)
Frame = +3
Query: 270 MVMEVGSLDAGGLRTLLRERAAQCLLLDCRSFFAFNAGHIAGSVNVRFSTIVRRRAKGAM 449
MVMEV SLDAGGLRTLLRERAAQCLLLDCRSFFAFNAGHIAGSVNVRFSTIVRRRAKGAM
Sbjct: 1 MVMEVVSLDAGGLRTLLRERAAQCLLLDCRSFFAFNAGHIAGSVNVRFSTIVRRRAKGAM 60
Query: 450 GLEHIVPNAELRGRLLAGAYHAVVLLDERSAALECAKRDGTLALAAGALCREARGAQIFL 629
GLEHIVPNAELRGRLLAGAYHAVVLLDERSAAL+ AKRDGTLALAAGALCREAR AQIFL
Sbjct: 61 GLEHIVPNAELRGRLLAGAYHAVVLLDERSAALDSAKRDGTLALAAGALCREARSAQIFL 120
Query: 630 LKGGYEAFSVSCPELCSKQSTPMGLSLPLSTSVPDSTESGCSSCSTPLYDQGGPVEILPF 809
LKGGYEAFS S PELCSKQSTPMGLSLPLSTSVPDS ESGCSSCSTPLYDQGGPVEILPF
Sbjct: 121 LKGGYEAFSASYPELCSKQSTPMGLSLPLSTSVPDSAESGCSSCSTPLYDQGGPVEILPF 180
Query: 810 LYLGSAYHASRKDMLDALGITALINVSANCPNHFEGHYQYKSIPVEDNHKADISSWFNEA 989
LYLGSAYHASRKDMLDALGITALINVSANCPNHFEGHYQYKSIPVEDNHKADISSWFNEA
Sbjct: 181 LYLGSAYHASRKDMLDALGITALINVSANCPNHFEGHYQYKSIPVEDNHKADISSWFNEA 240
Query: 990 IDFIDSIKNAGGRVFVHCQAGISRSATICLAYLMRTNRVKLDEAFEFVKQRRSIISPNFS 1169
IDFIDSIKNAGGRVFVHCQAGISRSATICLAYLMRTNRVKLDEAFEFVKQRRSIISPNFS
Sbjct: 241 IDFIDSIKNAGGRVFVHCQAGISRSATICLAYLMRTNRVKLDEAFEFVKQRRSIISPNFS 300
Query: 1170 FMGQLLQFESQVLAPHCSAEAGSPAMAVLDRGASTTTVFNFPVSIPVHPTNSALSYLQSP 1349
FMGQLLQFESQVLAPHCSAEAGSPAMAVLD STTTVFNFPVSIPVHPTNSALSYLQSP
Sbjct: 301 FMGQLLQFESQVLAPHCSAEAGSPAMAVLDCSTSTTTVFNFPVSIPVHPTNSALSYLQSP 360
Query: 1350 ITTSPSC 1370
ITTSPSC
Sbjct: 361 ITTSPSC 367
>ref|NP_001193882.1| dual specificity phosphatase 4 [Bos taurus].
Length = 394
Score = 454 bits (1169), Expect = e-127
Identities = 231/351 (65%), Positives = 270/351 (76%), Gaps = 6/351 (1%)
Frame = +3
Query: 336 QCLLLDCRSFFAFNAGHIAGSVNVRFSTIVRRRAKGAMGLEHIVP-NAELRGRLLAGAYH 512
+CLLLDCR F A +AG+I GSVNVR +TIVRRRAKG++ LE I+P E+R RL +G Y
Sbjct: 44 KCLLLDCRPFLAHSAGYIRGSVNVRCNTIVRRRAKGSVSLEQILPAEEEVRARLRSGLYS 103
Query: 513 AVVLLDERSAALECAKRDGTLALAAGALCREARGAQIFLLKGGYEAFSVSCPELCSKQST 692
AV++ DERS E + D T++L AL R A I LLKGGYE FS PE CSK
Sbjct: 104 AVIVYDERSPRAESLREDSTVSLVVQALRRNAERTDICLLKGGYERFSSEYPEFCSKTKA 163
Query: 693 PMGLSLPLSTSVPDSTESGCSSCSTPLYDQGGPVEILPFLYLGSAYHASRKDMLDALGIT 872
+ + S +S + CSSC TPL+DQGGPVEILPFLYLGSAYHA+R+DMLDALGIT
Sbjct: 164 LAAIPPAVPPSTAESLDLSCSSCGTPLHDQGGPVEILPFLYLGSAYHAARRDMLDALGIT 223
Query: 873 ALINVSANCPNHFEGHYQYKSIPVEDNHKADISSWFNEAIDFIDSIKNAGGRVFVHCQAG 1052
AL+NVS++CPNHFEGHYQYK IPVEDNHKADISSWF EAI++ID++K+ GRV VHCQAG
Sbjct: 224 ALLNVSSDCPNHFEGHYQYKCIPVEDNHKADISSWFMEAIEYIDAVKDCRGRVLVHCQAG 283
Query: 1053 ISRSATICLAYLMRTNRVKLDEAFEFVKQRRSIISPNFSFMGQLLQFESQVLAPHCSAEA 1232
ISRSATICLAYLM RV+L+EAFEFVKQRRSIISPNFSFMGQLLQFESQVLA C+ EA
Sbjct: 284 ISRSATICLAYLMMKKRVRLEEAFEFVKQRRSIISPNFSFMGQLLQFESQVLATSCAVEA 343
Query: 1233 GSPAMAVLDRGASTTT-----VFNFPVSIPVHPTNSALSYLQSPITTSPSC 1370
SP+ + +RG +T T VF+FPVS+ VHP S+L YL SPITTSPSC
Sbjct: 344 ASPSGPLRERGKATPTPTSQFVFSFPVSVGVHPAPSSLPYLHSPITTSPSC 394
>ref|NP_001179108.1| dual specificity protein phosphatase 2 [Bos taurus].
Length = 314
Score = 310 bits (794), Expect = 3e-84
Identities = 167/312 (53%), Positives = 208/312 (66%), Gaps = 6/312 (1%)
Frame = +3
Query: 291 LDAGGLRTLLRE--RAAQCLLLDCRSFFAFNAGHIAGSVNVRFSTIVRRRAKG--AMGLE 458
LD L LLRE A + L+LDCR F AF H+ + V ++ ++RRRA+G A L
Sbjct: 9 LDCAALGALLREPREAERTLVLDCRPFLAFCRRHVRAARPVPWNALLRRRARGPPAAALA 68
Query: 459 HIVPNAELRGRLLAGAYHAVVLLDERSAALECAKRDGTLALAAGALCREARGAQ--IFLL 632
++P+ LR RL G V+LDE SA++ DG AL E R + L
Sbjct: 69 CLLPDRALRARLARGELARAVVLDEGSASVADLPPDGPAHALLAALLHETRAGPTAVCFL 128
Query: 633 KGGYEAFSVSCPELCSKQSTPMGLSLPLSTSVPDSTESGCSSCSTPLYDQGGPVEILPFL 812
GG++ F CP+LCS+ P+ PD+ ++ S P YDQGGPVEILP+L
Sbjct: 129 PGGFDRFQACCPDLCSES--------PVPAMTPDNNDNSRSDSRAPSYDQGGPVEILPYL 180
Query: 813 YLGSAYHASRKDMLDALGITALINVSANCPNHFEGHYQYKSIPVEDNHKADISSWFNEAI 992
YLGS H+S L A GITA++NVSA+CPNHFEG +YKSIPVEDN +IS+WF EAI
Sbjct: 181 YLGSCSHSSDLQGLRACGITAVLNVSASCPNHFEGLLRYKSIPVEDNQMVEISAWFPEAI 240
Query: 993 DFIDSIKNAGGRVFVHCQAGISRSATICLAYLMRTNRVKLDEAFEFVKQRRSIISPNFSF 1172
FIDS+KN+GGRV VHCQAGISRSATICLAYL+++ RV+LDEAF+FVKQRR +ISPNFSF
Sbjct: 241 GFIDSVKNSGGRVLVHCQAGISRSATICLAYLIQSRRVRLDEAFDFVKQRRGVISPNFSF 300
Query: 1173 MGQLLQFESQVL 1208
MGQLLQFE+QVL
Sbjct: 301 MGQLLQFETQVL 312
>ref|XP_002691177.1| PREDICTED: dual specificity phosphatase 2-like [Bos taurus].
Length = 314
Score = 310 bits (794), Expect = 3e-84
Identities = 167/312 (53%), Positives = 208/312 (66%), Gaps = 6/312 (1%)
Frame = +3
Query: 291 LDAGGLRTLLRE--RAAQCLLLDCRSFFAFNAGHIAGSVNVRFSTIVRRRAKG--AMGLE 458
LD L LLRE A + L+LDCR F AF H+ + V ++ ++RRRA+G A L
Sbjct: 9 LDCAALGALLREPREAERTLVLDCRPFLAFCRRHVRAARPVPWNALLRRRARGPPAAALA 68
Query: 459 HIVPNAELRGRLLAGAYHAVVLLDERSAALECAKRDGTLALAAGALCREARGAQ--IFLL 632
++P+ LR RL G V+LDE SA++ DG AL E R + L
Sbjct: 69 CLLPDRALRARLARGELARAVVLDEGSASVADLPPDGPAHALLAALLHETRAGPTAVCFL 128
Query: 633 KGGYEAFSVSCPELCSKQSTPMGLSLPLSTSVPDSTESGCSSCSTPLYDQGGPVEILPFL 812
GG++ F CP+LCS+ P+ PD+ ++ S P YDQGGPVEILP+L
Sbjct: 129 PGGFDRFQACCPDLCSES--------PVPAMTPDNNDNSRSDSRAPSYDQGGPVEILPYL 180
Query: 813 YLGSAYHASRKDMLDALGITALINVSANCPNHFEGHYQYKSIPVEDNHKADISSWFNEAI 992
YLGS H+S L A GITA++NVSA+CPNHFEG +YKSIPVEDN +IS+WF EAI
Sbjct: 181 YLGSCSHSSDLQGLRACGITAVLNVSASCPNHFEGLLRYKSIPVEDNQMVEISAWFPEAI 240
Query: 993 DFIDSIKNAGGRVFVHCQAGISRSATICLAYLMRTNRVKLDEAFEFVKQRRSIISPNFSF 1172
FIDS+KN+GGRV VHCQAGISRSATICLAYL+++ RV+LDEAF+FVKQRR +ISPNFSF
Sbjct: 241 GFIDSVKNSGGRVLVHCQAGISRSATICLAYLIQSRRVRLDEAFDFVKQRRGVISPNFSF 300
Query: 1173 MGQLLQFESQVL 1208
MGQLLQFE+QVL
Sbjct: 301 MGQLLQFETQVL 312
>ref|NP_001094764.2| dual specificity protein phosphatase 7 [Bos taurus].
Length = 419
Score = 179 bits (454), Expect = 8e-45
Identities = 115/314 (36%), Positives = 165/314 (52%), Gaps = 26/314 (8%)
Frame = +3
Query: 333 AQCLLLDCRSFFAFNAGHIAGSVNVRF-STIVRRRAKGAMGLEHIVPNAELRGRLLAGAY 509
A LLLDCR F + HI ++N+ ++RR KG + + I+PN + R
Sbjct: 70 ASLLLLDCRPHELFESSHIETAINLAIPGLMLRRLRKGNLPIRSIIPNHADKERFATRCK 129
Query: 510 HAVVLLDERSAALECAKRDGTLALAAGALCREAR--GAQIFLLKGGYEAFSVSCPELCS- 680
A VLL + + A E G A G L ++ R G Q + L+GG+ F E C
Sbjct: 130 AATVLLYDEATA-EWQPEPGAPASVLGLLLQKLRDDGCQAYYLQGGFNKFQTEYSEHCET 188
Query: 681 ---KQSTPMGL---------SLPLSTSVPD--------STESGCSSCSTPLYDQGGPVEI 800
S+P G L +S+ D S+ + P PV+I
Sbjct: 189 NVDSSSSPSGSPPTSVLGLGGLRISSDCSDGESDRELPSSATESDGSPVPSSQPAFPVQI 248
Query: 801 LPFLYLGSAYHASRKDMLDALGITALINVSANCPNHFE--GHYQYKSIPVEDNHKADISS 974
LP+LYLG A ++ D+L GI ++NV+ N PN FE G + YK IP+ D+ ++S
Sbjct: 249 LPYLYLGCAKDSTNLDVLGKYGIKYILNVTPNLPNAFEHGGEFTYKQIPISDHWSQNLSQ 308
Query: 975 WFNEAIDFIDSIKNAGGRVFVHCQAGISRSATICLAYLMRTNRVKLDEAFEFVKQRRSII 1154
+F EAI FID ++ V VHC AGISRS T+ +AYLM+ + L++A++FVK+++S I
Sbjct: 309 FFPEAISFIDEARSKKCGVLVHCLAGISRSVTVTVAYLMQKMNLSLNDAYDFVKRKKSNI 368
Query: 1155 SPNFSFMGQLLQFE 1196
SPNF+FMGQLL FE
Sbjct: 369 SPNFNFMGQLLDFE 382
>ref|NP_001039660.1| dual specificity protein phosphatase 6 [Bos taurus].
Length = 381
Score = 166 bits (420), Expect = 7e-41
Identities = 113/312 (36%), Positives = 160/312 (51%), Gaps = 27/312 (8%)
Frame = +3
Query: 342 LLLDCRSFFAFNAGHIAGSVNVRFSTIVRRRA-KGAMGLEHIVPNAELRGRLLAGA-YHA 515
LL+DCR + + HI ++NV I+ RR KG++ + + E R R
Sbjct: 35 LLMDCRPQELYESSHIESAINVAIPGIMLRRLQKGSLPVRALFTRGEDRDRFTRRCGTDT 94
Query: 516 VVLLDERSAAL-ECAKRDGTLALAAGALCREARGAQIFLLKGGYEAFSV--------SCP 668
VVL DE S+ E + L L L E G + F L+GG+ F +
Sbjct: 95 VVLYDESSSDWNENTGGESVLGLLLKKLKDE--GCRAFYLEGGFSKFQAEFALHCETNLD 152
Query: 669 ELCSKQSTPMGL----SLPLSTSVPDSTESGCSSCSTPLYDQGG----------PVEILP 806
CS S P+ + L +S+ ES D G PVEILP
Sbjct: 153 GSCSSSSPPLPVLGLGGLRISSDSSSDIESDLDRDPNSATDSDGSPLSNSQPSFPVEILP 212
Query: 807 FLYLGSAYHASRKDMLDALGITALINVSANCPNHFE--GHYQYKSIPVEDNHKADISSWF 980
FLYLG A ++ D+L+ GI ++NV+ N PN FE G ++YK IP+ D+ ++S +F
Sbjct: 213 FLYLGCAKDSTNLDVLEEFGIKYILNVTPNLPNLFENAGEFKYKQIPISDHWSQNLSQFF 272
Query: 981 NEAIDFIDSIKNAGGRVFVHCQAGISRSATICLAYLMRTNRVKLDEAFEFVKQRRSIISP 1160
EAI FID + V VHC AGISRS T+ +AYLM+ + +++A++ VK ++S ISP
Sbjct: 273 PEAISFIDEARGKNCGVLVHCLAGISRSVTVTVAYLMQKLNLSMNDAYDIVKMKKSNISP 332
Query: 1161 NFSFMGQLLQFE 1196
NF+FMGQLL FE
Sbjct: 333 NFNFMGQLLDFE 344
>ref|XP_002698743.1| PREDICTED: hypothetical protein [Bos taurus].
Length = 655
Score = 125 bits (313), Expect(2) = 5e-40
Identities = 94/261 (36%), Positives = 125/261 (47%), Gaps = 1/261 (0%)
Frame = -3
Query: 1079 EADGGRSGNARLAVDKHPSAGILDGVDEIDCLIEPGADVRLVVVLNGDALVLVVTLKMVG 900
+ G S +L + P G D +D L EPGADV LV+VL+ D LVL+V+ ++V
Sbjct: 91 DIQGKSSWLYQLPMPTRPGQG--QPTDVLDGLHEPGADVGLVIVLHRDTLVLIVSFEVVR 148
Query: 899 TVGRDVDQGSDTQGIQHVLARSMVGTPQVEKGQDLHWATLIVEWSAARTAP*FGAVRDAS 720
VG DV QG D QGIQHV A ++GT + DL L+++W A +R A
Sbjct: 149 AVGGDVQQGRDAQGIQHVPAGRVIGTAE---KSDLS-PYLVMQWGPTGAAAQVQGLRRAW 204
Query: 719 TQGKAEPHGGRLFAAELRAGNRKSFISSFEQEDXXXXXXXAERSGGQSQGAVAFGALQGS 540
+ + F E + I++ +Q D +R Q GAV AL
Sbjct: 205 GHSRWDGCQSLGFGTEFWVLRGEPLIATLQQADVGALGVATQRLHHQRHGAVLTEALGAR 264
Query: 539 AALXXXXXXXXXXXXXXXXQLRV-GHDVLQAHGALGPAPHDGTEAHVDGAGDVAGVESEE 363
AAL L + G D+LQAHGALGP PH+ AHVD A DVA +E
Sbjct: 265 AALVVDDDGGIEAGAQAGAHLLLGGQDLLQAHGALGPPPHNSVAAHVDRASDVARAVRQE 324
Query: 362 GATVQQQTLRRALPQQRPQAS 300
+ VQQQ L A Q+PQ +
Sbjct: 325 RSAVQQQALAAA---QQPQGA 342
Score = 59.7 bits (143), Expect(2) = 5e-40
Identities = 39/80 (48%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
Frame = -1
Query: 1309 TGMETGKLKT-----VVVEAPRSSTAMAGLPASAEQCGARTWDSNCSSWPXXXXXXXXXX 1145
T ETGKLKT V V PRS GL AS Q A T DSNCSS P
Sbjct: 10 TDSETGKLKTNCDVGVGVALPRSRRGPEGLAASTAQDVASTCDSNCSSCPIKLKLGEMML 69
Query: 1144 XLCFTNSKASSSLTRLVLMR 1085
C TNSKASSS TR ++R
Sbjct: 70 RRCLTNSKASSSRTRFFIIR 89
>ref|NP_001179956.1| dual specificity protein phosphatase 9 [Bos taurus].
Length = 380
Score = 162 bits (411), Expect = 8e-40
Identities = 121/348 (34%), Positives = 175/348 (50%), Gaps = 37/348 (10%)
Frame = +3
Query: 306 LRTLLRERAAQCLLLDCRSFFAFNAGHIAGSVNVRF-STIVRRRAKGAMGLEHIVPNAEL 482
LR L + LLLDCRS + + I G+++V + ++RR +G++ + ++P L
Sbjct: 11 LRRELSPPRPRLLLLDCRSRELYESARIGGALSVALPALLLRRLRRGSLSVRALLPGPPL 70
Query: 483 RGRLLAGAYHAVVLLDE---RSAALECAKRDGTLALAAGALCREAR--GAQIFLLKGGYE 647
+ A V+L D+ R E + G L ++ R G + L+GG+
Sbjct: 71 QPPPPA----PVLLYDQGGGRHRRTEAEAEEWEADSVLGTLLQKLREEGYLAYYLQGGFS 126
Query: 648 AFSVSCPELCS----KQSTPMGLSLPLST----------------SVPDSTESGC---SS 758
F CP LC ++ P LP S PD C S
Sbjct: 127 RFQAECPHLCETSLDRRGGPSMAPLPSPVVGLGGLCLGSDCSDVDSEPDRDAMSCGLDSE 186
Query: 759 CSTPLYDQGG-----PVEILPFLYLGSAYHASRKDMLDALGITALINVSANCPNHFE--G 917
+TP G PV+ILP LYLGSA ++ + L LGI ++NV+ N PN FE G
Sbjct: 187 GATP--PPAGLLPSFPVQILPNLYLGSARDSANVESLAKLGIRYILNVTPNLPNLFEKNG 244
Query: 918 HYQYKSIPVEDNHKADISSWFNEAIDFIDSIKNAGGRVFVHCQAGISRSATICLAYLMRT 1097
+ YK IP+ D+ ++S +F EAI FID + V VHC AG+SRS T+ +AYLM+
Sbjct: 245 DFHYKQIPISDHWSQNLSQFFPEAIAFIDEALSQNCGVLVHCLAGVSRSVTVTVAYLMQK 304
Query: 1098 NRVKLDEAFEFVKQRRSIISPNFSFMGQLLQFE-SQVLAPHCSAEAGS 1238
+ L++A++ VK+++S ISPNFSFMGQLL FE S L + E GS
Sbjct: 305 LHLSLNDAYDLVKRKKSNISPNFSFMGQLLDFERSLQLEERRARERGS 352
>ref|XP_002699788.1| PREDICTED: dual specificity phosphatase 9-like [Bos taurus].
Length = 380
Score = 162 bits (411), Expect = 8e-40
Identities = 121/348 (34%), Positives = 175/348 (50%), Gaps = 37/348 (10%)
Frame = +3
Query: 306 LRTLLRERAAQCLLLDCRSFFAFNAGHIAGSVNVRF-STIVRRRAKGAMGLEHIVPNAEL 482
LR L + LLLDCRS + + I G+++V + ++RR +G++ + ++P L
Sbjct: 11 LRRELSPPRPRLLLLDCRSRELYESARIGGALSVALPALLLRRLRRGSLSVRALLPGPPL 70
Query: 483 RGRLLAGAYHAVVLLDE---RSAALECAKRDGTLALAAGALCREAR--GAQIFLLKGGYE 647
+ A V+L D+ R E + G L ++ R G + L+GG+
Sbjct: 71 QPPPPA----PVLLYDQGGGRHRRTEAEAEEWEADSVLGTLLQKLREEGYLAYYLQGGFS 126
Query: 648 AFSVSCPELCS----KQSTPMGLSLPLST----------------SVPDSTESGC---SS 758
F CP LC ++ P LP S PD C S
Sbjct: 127 RFQAECPHLCETSLDRRGGPSMAPLPSPVVGLGGLCLGSDCSDVDSEPDRDAMSCGLDSE 186
Query: 759 CSTPLYDQGG-----PVEILPFLYLGSAYHASRKDMLDALGITALINVSANCPNHFE--G 917
+TP G PV+ILP LYLGSA ++ + L LGI ++NV+ N PN FE G
Sbjct: 187 GATP--PPAGLLPSFPVQILPNLYLGSARDSANVESLAKLGIRYILNVTPNLPNLFEKNG 244
Query: 918 HYQYKSIPVEDNHKADISSWFNEAIDFIDSIKNAGGRVFVHCQAGISRSATICLAYLMRT 1097
+ YK IP+ D+ ++S +F EAI FID + V VHC AG+SRS T+ +AYLM+
Sbjct: 245 DFHYKQIPISDHWSQNLSQFFPEAIAFIDEALSQNCGVLVHCLAGVSRSVTVTVAYLMQK 304
Query: 1098 NRVKLDEAFEFVKQRRSIISPNFSFMGQLLQFE-SQVLAPHCSAEAGS 1238
+ L++A++ VK+++S ISPNFSFMGQLL FE S L + E GS
Sbjct: 305 LHLSLNDAYDLVKRKKSNISPNFSFMGQLLDFERSLQLEERRARERGS 352
>ref|XP_002687822.1| PREDICTED: dual specificity phosphatase 8-like [Bos taurus].
Length = 643
Score = 159 bits (402), Expect = 8e-39
Identities = 101/301 (33%), Positives = 150/301 (49%), Gaps = 1/301 (0%)
Frame = +3
Query: 306 LRTLLRERAAQCLLLDCRSFFAFNAGHIAGSVNVRFSTIVRRRAKGAMGLEHIVPNAELR 485
L LL + LL+D R F +N HI ++N+ S +++RR + L + +
Sbjct: 15 LVALLESGTEKVLLIDSRPFVEYNTSHILEAININCSKLMKRRLQQDKVLITELIQHSAK 74
Query: 486 GRLLAGAYHAVVLLDERSAALECAKRDGTLALAAGALCREARGAQIFLLKGGYEAFSVSC 665
++ VV+ D+ S + D L + G L E + + LL GG+ FS
Sbjct: 75 HKVDLDCSQKVVVYDQSSQDVASLASDCFLTVLLGKL--EKSFSSVHLLAGGFAEFSRCF 132
Query: 666 PELCSKQSTPMGLSLPLSTSVPDSTESGCSSCSTPLYDQGGPVEILPFLYLGSAYHASRK 845
P LC +ST VP C + GP ILP LYLG K
Sbjct: 133 PGLCEGKST----------LVPTCISQPCLPVANI-----GPTRILPNLYLGCQRDVLNK 177
Query: 846 DMLDALGITALINVSANCPN-HFEGHYQYKSIPVEDNHKADISSWFNEAIDFIDSIKNAG 1022
+++ GI ++N S CP F + +PV D+ I W ++++DFI+ K +
Sbjct: 178 ELMQQNGIGYVLNASNTCPKPDFIPESHFLRVPVNDSFCEKILPWLDKSVDFIEKAKASN 237
Query: 1023 GRVFVHCQAGISRSATICLAYLMRTNRVKLDEAFEFVKQRRSIISPNFSFMGQLLQFESQ 1202
G V VHC AGISRSATI +AY+M+ + LDEA+ FVK++R ISPNF+F+GQLL +E +
Sbjct: 238 GCVLVHCLAGISRSATIAIAYIMKRMDMSLDEAYRFVKEKRPTISPNFNFLGQLLDYEKR 297
Query: 1203 V 1205
+
Sbjct: 298 I 298
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 71,556,557
Number of extensions: 1970021
Number of successful extensions: 8662
Number of sequences better than 1.0e-05: 40
Number of HSP's gapped: 8576
Number of HSP's successfully gapped: 42
Length of query: 654
Length of database: 17,681,374
Length adjustment: 109
Effective length of query: 545
Effective length of database: 14,074,782
Effective search space: 7670756190
Effective search space used: 7670756190
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-001005
(1963 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_546235.2| PREDICTED: similar to Dual specificity protein ... 710 0.0
Alignment gi|XP_539995.2| PREDICTED: similar to dual specificity phosphat... 452 e-127
Alignment gi|XP_866521.1| PREDICTED: similar to Dual specificity protein ... 393 e-109
Alignment gi|XP_854441.1| PREDICTED: similar to Dual specificity protein ... 301 1e-81
Alignment gi|XP_544014.2| PREDICTED: similar to dual specificity phosphat... 295 1e-79
Alignment gi|XP_541858.2| PREDICTED: similar to dual specificity phosphat... 179 9e-45
Alignment gi|XP_854279.1| PREDICTED: similar to Dual specificity protein ... 171 2e-42
Alignment gi|XP_852241.1| PREDICTED: similar to dual specificity phosphat... 165 2e-40
Alignment gi|XP_549360.2| PREDICTED: similar to Dual specificity protein ... 163 6e-40
Alignment gi|XP_543810.2| PREDICTED: similar to Dual specificity protein ... 159 7e-39
>ref|XP_546235.2| PREDICTED: similar to Dual specificity protein phosphatase 1 (MAP
kinase phosphatase-1) (MKP-1) (Protein-tyrosine
phosphatase CL100) (Dual specificity protein phosphatase
hVH1) isoform 1 [Canis familiaris].
Length = 367
Score = 710 bits (1832), Expect = 0.0
Identities = 355/367 (96%), Positives = 360/367 (98%)
Frame = +3
Query: 270 MVMEVGSLDAGGLRTLLRERAAQCLLLDCRSFFAFNAGHIAGSVNVRFSTIVRRRAKGAM 449
MVM+VG+LDAGGLRTLLRERAAQCLLLDCRSFFAFNAGHIAGSVNVRFSTIVRRRAKGAM
Sbjct: 1 MVMDVGALDAGGLRTLLRERAAQCLLLDCRSFFAFNAGHIAGSVNVRFSTIVRRRAKGAM 60
Query: 450 GLEHIVPNAELRGRLLAGAYHAVVLLDERSAALECAKRDGTLALAAGALCREARGAQIFL 629
GLEHIVPNAELRGRLLAGAYHAVVLLDERSAAL+ AKRDGTLALAAGALCREAR A++F
Sbjct: 61 GLEHIVPNAELRGRLLAGAYHAVVLLDERSAALDGAKRDGTLALAAGALCREARAARVFF 120
Query: 630 LKGGYEAFSVSCPELCSKQSTPMGLSLPLSTSVPDSTESGCSSCSTPLYDQGGPVEILPF 809
LKGGYEAFS SCPELCSKQSTPMGLSLPLSTSVPDSTESGCSSCSTPLYDQGGPVEILPF
Sbjct: 121 LKGGYEAFSASCPELCSKQSTPMGLSLPLSTSVPDSTESGCSSCSTPLYDQGGPVEILPF 180
Query: 810 LYLGSAYHASRKDMLDALGITALINVSANCPNHFEGHYQYKSIPVEDNHKADISSWFNEA 989
LYLGSAYHASRKDMLDALGITALINVSANCPNHFEGHYQYKSIPVEDNHKADISSWFNEA
Sbjct: 181 LYLGSAYHASRKDMLDALGITALINVSANCPNHFEGHYQYKSIPVEDNHKADISSWFNEA 240
Query: 990 IDFIDSIKNAGGRVFVHCQAGISRSATICLAYLMRTNRVKLDEAFEFVKQRRSIISPNFS 1169
IDFIDSIKNAGGRVFVHCQAGISRSATICLAYLMRTNRVKLDEAFEFVKQRRSIISPNFS
Sbjct: 241 IDFIDSIKNAGGRVFVHCQAGISRSATICLAYLMRTNRVKLDEAFEFVKQRRSIISPNFS 300
Query: 1170 FMGQLLQFESQVLAPHCSAEAGSPAMAVLDRGASTTTVFNFPVSIPVHPTNSALSYLQSP 1349
FMGQLLQFESQVLAPHCSAEAGSPAMAVLDR STTTVFNFPVSIPVH TNSALSYLQSP
Sbjct: 301 FMGQLLQFESQVLAPHCSAEAGSPAMAVLDRSTSTTTVFNFPVSIPVHSTNSALSYLQSP 360
Query: 1350 ITTSPSC 1370
ITTSPSC
Sbjct: 361 ITTSPSC 367
>ref|XP_539995.2| PREDICTED: similar to dual specificity phosphatase 4 [Canis
familiaris].
Length = 477
Score = 452 bits (1163), Expect = e-127
Identities = 231/351 (65%), Positives = 270/351 (76%), Gaps = 6/351 (1%)
Frame = +3
Query: 336 QCLLLDCRSFFAFNAGHIAGSVNVRFSTIVRRRAKGAMGLEHIVP-NAELRGRLLAGAYH 512
+CLLLDCR F A +AG+I GSVNVR +TIVRRRAKG++ LE I+P E+R RL +G Y
Sbjct: 127 KCLLLDCRPFLAHSAGYIRGSVNVRCNTIVRRRAKGSVSLEQILPAEEEVRARLRSGLYS 186
Query: 513 AVVLLDERSAALECAKRDGTLALAAGALCREARGAQIFLLKGGYEAFSVSCPELCSKQST 692
AV++ DERS E + D T++L AL R A I LLKGGYE FS PE CSK
Sbjct: 187 AVIVYDERSPRAESLREDSTVSLVVRALRRNAERTDICLLKGGYERFSSEYPEFCSKTKA 246
Query: 693 PMGLSLPLSTSVPDSTESGCSSCSTPLYDQGGPVEILPFLYLGSAYHASRKDMLDALGIT 872
+ + S +S + GCSSC TPL+DQGGPVEILPFLYLGSAYHA+R+DMLDALGIT
Sbjct: 247 LAAIPPAVPASTAESLDVGCSSCGTPLHDQGGPVEILPFLYLGSAYHAARRDMLDALGIT 306
Query: 873 ALINVSANCPNHFEGHYQYKSIPVEDNHKADISSWFNEAIDFIDSIKNAGGRVFVHCQAG 1052
AL+NVS++CPNHFEGHYQYK IPVEDNHKADISSWF EAI++ID++K+ G V VHCQAG
Sbjct: 307 ALLNVSSDCPNHFEGHYQYKCIPVEDNHKADISSWFMEAIEYIDAVKDRRGCVLVHCQAG 366
Query: 1053 ISRSATICLAYLMRTNRVKLDEAFEFVKQRRSIISPNFSFMGQLLQFESQVLAPHCSAEA 1232
ISRSATICLAYLM RV+L+EAFEFVKQRRSIISPNFSFMGQLLQFESQVLA C+AEA
Sbjct: 367 ISRSATICLAYLMMKKRVRLEEAFEFVKQRRSIISPNFSFMGQLLQFESQVLATSCAAEA 426
Query: 1233 GSPAMAVLDRGASTTT-----VFNFPVSIPVHPTNSALSYLQSPITTSPSC 1370
SP+ + +RG +T T VF+FPVS+ VH S+L YL SPITTSPSC
Sbjct: 427 ASPSGPLRERGQATPTPTSQFVFSFPVSVGVHAAPSSLPYLHSPITTSPSC 477
>ref|XP_866521.1| PREDICTED: similar to Dual specificity protein phosphatase 1 (MAP
kinase phosphatase-1) (MKP-1) (Protein-tyrosine
phosphatase CL100) (Dual specificity protein phosphatase
hVH1) isoform 2 [Canis familiaris].
Length = 278
Score = 393 bits (1009), Expect = e-109
Identities = 194/199 (97%), Positives = 194/199 (97%)
Frame = +3
Query: 774 YDQGGPVEILPFLYLGSAYHASRKDMLDALGITALINVSANCPNHFEGHYQYKSIPVEDN 953
Y GGPVEILPFLYLGSAYHASRKDMLDALGITALINVSANCPNHFEGHYQYKSIPVEDN
Sbjct: 80 YHAGGPVEILPFLYLGSAYHASRKDMLDALGITALINVSANCPNHFEGHYQYKSIPVEDN 139
Query: 954 HKADISSWFNEAIDFIDSIKNAGGRVFVHCQAGISRSATICLAYLMRTNRVKLDEAFEFV 1133
HKADISSWFNEAIDFIDSIKNAGGRVFVHCQAGISRSATICLAYLMRTNRVKLDEAFEFV
Sbjct: 140 HKADISSWFNEAIDFIDSIKNAGGRVFVHCQAGISRSATICLAYLMRTNRVKLDEAFEFV 199
Query: 1134 KQRRSIISPNFSFMGQLLQFESQVLAPHCSAEAGSPAMAVLDRGASTTTVFNFPVSIPVH 1313
KQRRSIISPNFSFMGQLLQFESQVLAPHCSAEAGSPAMAVLDR STTTVFNFPVSIPVH
Sbjct: 200 KQRRSIISPNFSFMGQLLQFESQVLAPHCSAEAGSPAMAVLDRSTSTTTVFNFPVSIPVH 259
Query: 1314 PTNSALSYLQSPITTSPSC 1370
TNSALSYLQSPITTSPSC
Sbjct: 260 STNSALSYLQSPITTSPSC 278
Score = 161 bits (407), Expect = 2e-39
Identities = 80/82 (97%), Positives = 82/82 (100%)
Frame = +3
Query: 270 MVMEVGSLDAGGLRTLLRERAAQCLLLDCRSFFAFNAGHIAGSVNVRFSTIVRRRAKGAM 449
MVM+VG+LDAGGLRTLLRERAAQCLLLDCRSFFAFNAGHIAGSVNVRFSTIVRRRAKGAM
Sbjct: 1 MVMDVGALDAGGLRTLLRERAAQCLLLDCRSFFAFNAGHIAGSVNVRFSTIVRRRAKGAM 60
Query: 450 GLEHIVPNAELRGRLLAGAYHA 515
GLEHIVPNAELRGRLLAGAYHA
Sbjct: 61 GLEHIVPNAELRGRLLAGAYHA 82
>ref|XP_854441.1| PREDICTED: similar to Dual specificity protein phosphatase 2 (Dual
specificity protein phosphatase PAC-1) [Canis
familiaris].
Length = 314
Score = 301 bits (771), Expect = 1e-81
Identities = 164/312 (52%), Positives = 205/312 (65%), Gaps = 6/312 (1%)
Frame = +3
Query: 291 LDAGGLRTLLRE--RAAQCLLLDCRSFFAFNAGHIAGSVNVRFSTIVRRRAKG--AMGLE 458
LD L LLRE A + LLLDCR F AF H+ + V ++ ++RRRA+G A L
Sbjct: 9 LDCAALGALLREPREAERTLLLDCRPFLAFCRRHVRHARPVPWNALLRRRARGPPAAALA 68
Query: 459 HIVPNAELRGRLLAGAYHAVVLLDERSAALECAKRDGTLALAAGALC--REARGAQIFLL 632
++P+ LR RL G V+LDE SA++ DG AL E ++ +
Sbjct: 69 CLLPDRALRARLARGELARAVVLDEGSASVAALPPDGPAHALLAALLPXEEVLAPKVNGI 128
Query: 633 KGGYEAFSVSCPELCSKQSTPMGLSLPLSTSVPDSTESGCSSCSTPLYDQGGPVEILPFL 812
G++ F CP+LCS+ P S E+ S P YDQGGPVEILP+L
Sbjct: 129 VSGFDGFQACCPDLCSESPAPAMSSA--------GVENSRSDARAPSYDQGGPVEILPYL 180
Query: 813 YLGSAYHASRKDMLDALGITALINVSANCPNHFEGHYQYKSIPVEDNHKADISSWFNEAI 992
+LGS H+S L A GITA++NVSA+CPNHFEG ++YKSIPVEDN +IS+WF EAI
Sbjct: 181 FLGSCSHSSDLQGLQACGITAVLNVSASCPNHFEGLFRYKSIPVEDNQMVEISAWFQEAI 240
Query: 993 DFIDSIKNAGGRVFVHCQAGISRSATICLAYLMRTNRVKLDEAFEFVKQRRSIISPNFSF 1172
FIDS+KN+GGRV VHCQAGISRSATICLAYL+++ RV+LDEAF+FVKQRR +ISPNFSF
Sbjct: 241 SFIDSVKNSGGRVLVHCQAGISRSATICLAYLIQSRRVRLDEAFDFVKQRRGVISPNFSF 300
Query: 1173 MGQLLQFESQVL 1208
MGQLLQFE+QVL
Sbjct: 301 MGQLLQFETQVL 312
>ref|XP_544014.2| PREDICTED: similar to dual specificity phosphatase 5 [Canis
familiaris].
Length = 382
Score = 295 bits (754), Expect = 1e-79
Identities = 177/392 (45%), Positives = 238/392 (60%), Gaps = 27/392 (6%)
Frame = +3
Query: 276 MEVGSLDAGGLRTLLR-ERAAQCLLLDCRSFFAFNAGHIAGSVNVRFSTIVRRRAKG-AM 449
M+V SLD LR +LR E AA+C++LDCR + AF A + GS+NV +++V RRA+G A+
Sbjct: 1 MKVTSLDGRQLRKMLRKEAAARCVVLDCRPYLAFAASSVRGSLNVNLNSVVLRRARGGAV 60
Query: 450 GLEHIVPNAELRGRLL---AGAYHAVVLLDERSAALECAKRDGTLALAAGAL--CREARG 614
+++P+ R RLL G AVV+LD+ S + + + + +L C A G
Sbjct: 61 SARYVLPDEAARARLLQEGGGGVAAVVVLDQGSRHWQKLREESAARVVLTSLLACLPA-G 119
Query: 615 AQIFLLKGGYEAFSVSCPELCSKQSTPMGLSLPLSTSVPDSTESGCSSCSTPL------- 773
+++ LKGGYE F PE C P+S D+ ++ S C P+
Sbjct: 120 PRVYFLKGGYETFYSEYPECCVDVQ-------PISQEKVDTEKALMSQCGKPVLSISYRP 172
Query: 774 -YDQGGPVEILPFLYLGSAYHASRKDMLDALGITALINVSANCPNHFEGHYQYKSIPVED 950
YDQGGPVEILPFLYLGSAYHAS+ + L L ITAL+NVS H YK IPVED
Sbjct: 173 AYDQGGPVEILPFLYLGSAYHASKCEFLANLHITALLNVSRRISESCTTHLHYKWIPVED 232
Query: 951 NHKADISSWFNEAIDFIDSIKNAGGRVFVHCQAGISRSATICLAYLMRTNRVKLDEAFEF 1130
+H ADISS F EAIDFID ++ GG+V VHC+AGISRS TIC+AYLM+ + +L +AF++
Sbjct: 233 SHTADISSHFQEAIDFIDCVREKGGKVLVHCEAGISRSPTICMAYLMKAKQFRLKDAFDY 292
Query: 1131 VKQRRSIISPNFSFMGQLLQFESQVL-----APHCSAE-AGSPAMAVLD------RGAST 1274
+KQRRS++SPNF FMGQLLQ+ES++L AP C E AGS +A L +G+
Sbjct: 293 IKQRRSVVSPNFGFMGQLLQYESEILPSTPQAPSCQGEAAGSSFLAHLQTLSPDMQGSYC 352
Query: 1275 TTVFNFPVSIPVHPTNSALSYLQSPITTSPSC 1370
T + +P H T S L +SP+ T+ SC
Sbjct: 353 TFPTSVLAPMPTHSTVSELG--RSPMATATSC 382
>ref|XP_541858.2| PREDICTED: similar to dual specificity phosphatase 7 isoform 1 [Canis
familiaris].
Length = 406
Score = 179 bits (454), Expect = 9e-45
Identities = 115/314 (36%), Positives = 165/314 (52%), Gaps = 26/314 (8%)
Frame = +3
Query: 333 AQCLLLDCRSFFAFNAGHIAGSVNVRF-STIVRRRAKGAMGLEHIVPNAELRGRLLAGAY 509
A LLLDCR F + HI ++N+ ++RR KG + + I+PN + R
Sbjct: 57 ASLLLLDCRPHELFESSHIETAINLAIPGLMLRRLRKGNLPIRSIIPNHADKERFATRCK 116
Query: 510 HAVVLLDERSAALECAKRDGTLALAAGALCREAR--GAQIFLLKGGYEAFSVSCPELCS- 680
A VLL + + A E G A G L ++ R G Q + L+GG+ F E C
Sbjct: 117 AATVLLYDEATA-EWQPEPGAPASVLGLLLQKLRDDGCQAYYLQGGFNKFQTEYSEHCET 175
Query: 681 ---KQSTPMGL---------SLPLSTSVPD--------STESGCSSCSTPLYDQGGPVEI 800
S+P G L +S+ D S+ + P PV+I
Sbjct: 176 NVDSSSSPSGSPPTSVLGLGGLRISSDCSDGESDRELPSSATESDGSPVPSSQPAFPVQI 235
Query: 801 LPFLYLGSAYHASRKDMLDALGITALINVSANCPNHFE--GHYQYKSIPVEDNHKADISS 974
LP+LYLG A ++ D+L GI ++NV+ N PN FE G + YK IP+ D+ ++S
Sbjct: 236 LPYLYLGCAKDSTNLDVLGKYGIKYILNVTPNLPNAFEHGGEFTYKQIPISDHWSQNLSQ 295
Query: 975 WFNEAIDFIDSIKNAGGRVFVHCQAGISRSATICLAYLMRTNRVKLDEAFEFVKQRRSII 1154
+F EAI FID ++ V VHC AGISRS T+ +AYLM+ + L++A++FVK+++S I
Sbjct: 296 FFPEAISFIDEARSKKCGVLVHCLAGISRSVTVTVAYLMQKMNLSLNDAYDFVKRKKSNI 355
Query: 1155 SPNFSFMGQLLQFE 1196
SPNF+FMGQLL FE
Sbjct: 356 SPNFNFMGQLLDFE 369
>ref|XP_854279.1| PREDICTED: similar to Dual specificity protein phosphatase 8
(Neuronal tyrosine threonine phosphatase 1) [Canis
familiaris].
Length = 437
Score = 171 bits (433), Expect = 2e-42
Identities = 121/349 (34%), Positives = 181/349 (51%), Gaps = 2/349 (0%)
Frame = +3
Query: 291 LDAGGLRTLLRERAAQCLLLDCRSFFAFNAGHIAGSVNVRFSTIVRRRAK-GAMGLEHIV 467
+DA L +LLR L++D RSF +N+ H+ SVN+ S +V+RR + G + + ++
Sbjct: 11 MDAKKLASLLRGGPGGPLVIDSRSFVEYNSWHVLSSVNICCSKLVKRRLQQGKVTIAELI 70
Query: 468 PNAELRGRLLAGAYHAVVLLDERSAALECAKRDGTLALAAGALCREARGAQIFLLKGGYE 647
A +RG++ A VV+ D+ + D L++ L + + +L GG+
Sbjct: 71 QPA-VRGQVEAAEPQDVVVYDQSTRDASVLAADSFLSILLSKL--DGCFDSVAILTGGFA 127
Query: 648 AFSVSCPELCSKQSTPMGLSLPLSTSVPDSTESGCSSCSTPLYDQGGPVEILPFLYLGSA 827
FS P LC + P L LP+S S P C + G ILP LYLGS
Sbjct: 128 TFSSCFPGLC--EGKPAAL-LPMSLSQP------CLPVPSV-----GLTRILPHLYLGSQ 173
Query: 828 YHASRKDMLDALGITALINVSANCPN-HFEGHYQYKSIPVEDNHKADISSWFNEAIDFID 1004
KD++ GI+ ++N S +CP F ++ IP+ DN+ + W +++I+FID
Sbjct: 174 KDVLNKDLMTQNGISYVLNASNSCPKPDFICESRFMRIPINDNYCEKLLPWLDKSIEFID 233
Query: 1005 SIKNAGGRVFVHCQAGISRSATICLAYLMRTNRVKLDEAFEFVKQRRSIISPNFSFMGQL 1184
K + +V VHC AGISRSATI +AY+M+T + D+A+ FVK RR ISPNF+F+GQL
Sbjct: 234 KAKLSSCQVIVHCLAGISRSATIAIAYIMKTMGMSSDDAYRFVKDRRPSISPNFNFLGQL 293
Query: 1185 LQFESQVLAPHCSAEAGSPAMAVLDRGASTTTVFNFPVSIPVHPTNSAL 1331
L++E + G+ A + GA T P P P SAL
Sbjct: 294 LEYERSLKLLAALQGDGAAAASAAREGAPGTG-GELPAPAPA-PATSAL 340
>ref|XP_852241.1| PREDICTED: similar to dual specificity phosphatase 6 isoform a
isoform 2 [Canis familiaris].
Length = 381
Score = 165 bits (417), Expect = 2e-40
Identities = 113/312 (36%), Positives = 159/312 (50%), Gaps = 27/312 (8%)
Frame = +3
Query: 342 LLLDCRSFFAFNAGHIAGSVNVRFSTIVRRRA-KGAMGLEHIVPNAELRGRLLAGA-YHA 515
LL+DCR + + HI ++NV I+ RR KG + + + E R R
Sbjct: 35 LLMDCRPQELYESSHIESAINVAIPGIMLRRLQKGNLPVRALFTRGEDRDRFTRRCGTDT 94
Query: 516 VVLLDERSAAL-ECAKRDGTLALAAGALCREARGAQIFLLKGGYEAFSV--------SCP 668
VVL DE S+ E + L L L E G + F L+GG+ F +
Sbjct: 95 VVLYDESSSDWNENTGGESVLGLLLKKLKDE--GCRAFYLEGGFSKFQAEFALHCETNLD 152
Query: 669 ELCSKQSTPMGL----SLPLSTSVPDSTESGCSSCSTPLYDQGG----------PVEILP 806
CS S P+ + L +S+ ES D G PVEILP
Sbjct: 153 GSCSSSSPPLPVLGLGGLRISSDSSSDIESDLDRDPNSATDSDGSPLSNSQPSFPVEILP 212
Query: 807 FLYLGSAYHASRKDMLDALGITALINVSANCPNHFE--GHYQYKSIPVEDNHKADISSWF 980
FLYLG A ++ D+L+ GI ++NV+ N PN FE G ++YK IP+ D+ ++S +F
Sbjct: 213 FLYLGCAKDSTNLDVLEEFGIKYILNVTPNLPNLFENAGEFKYKQIPISDHWSQNLSQFF 272
Query: 981 NEAIDFIDSIKNAGGRVFVHCQAGISRSATICLAYLMRTNRVKLDEAFEFVKQRRSIISP 1160
EAI FID + V VHC AGISRS T+ +AYLM+ + +++A++ VK ++S ISP
Sbjct: 273 PEAISFIDEARGKNCGVLVHCLAGISRSVTVTVAYLMQKLNLSMNDAYDIVKMKKSNISP 332
Query: 1161 NFSFMGQLLQFE 1196
NF+FMGQLL FE
Sbjct: 333 NFNFMGQLLDFE 344
>ref|XP_549360.2| PREDICTED: similar to Dual specificity protein phosphatase 9
(Mitogen-activated protein kinase phosphatase 4) (MAP
kinase phosphatase 4) (MKP-4) [Canis familiaris].
Length = 625
Score = 163 bits (412), Expect = 6e-40
Identities = 115/331 (34%), Positives = 171/331 (51%), Gaps = 34/331 (10%)
Frame = +3
Query: 306 LRTLLRERAAQCLLLDCRSFFAFNAGHIAGSVNVRF-STIVRRRAKGAMGLEHIVPNAEL 482
LR L + LLLDCRS + + I G+++V + ++RR +G++ + ++P L
Sbjct: 256 LRRALSPPRPRLLLLDCRSRELYESARIGGALSVALPALLLRRLRRGSLSVRALLPGPPL 315
Query: 483 RGRLLAGAYHAVVLLDE---RSAALECAKRDGTLALAAGALCREAR--GAQIFLLKGGYE 647
+ A V+L D+ R E + G L ++ R G + L+GG+
Sbjct: 316 QPPPPA----PVLLYDQGGGRPRRGEAEAEEWEADSVLGTLLQKLREEGYLAYYLQGGFS 371
Query: 648 AFSVSCPELCSKQ-------------STPMGLS-LPLSTSVPDS-TESGCSSCSTPLYDQ 782
F CP LC S +GL L L + D+ +E S S L +
Sbjct: 372 RFQAECPHLCETSLSGRGGTSTAPVPSPVVGLGGLCLGSDCSDAESEPDRDSLSCGLDSE 431
Query: 783 GG-----------PVEILPFLYLGSAYHASRKDMLDALGITALINVSANCPNHFE--GHY 923
G PV+ILP LYLGSA ++ + L LGI ++NV+ N PN FE G +
Sbjct: 432 GATPPPAGLLPSFPVQILPNLYLGSARDSANVESLAKLGIRYILNVTPNLPNLFEKNGDF 491
Query: 924 QYKSIPVEDNHKADISSWFNEAIDFIDSIKNAGGRVFVHCQAGISRSATICLAYLMRTNR 1103
YK IP+ D+ ++S +F EAI FID + V VHC AG+SRS T+ +AYLM+
Sbjct: 492 HYKQIPISDHWSQNLSQFFPEAIAFIDEALSQNCGVLVHCLAGVSRSVTVTVAYLMQKRH 551
Query: 1104 VKLDEAFEFVKQRRSIISPNFSFMGQLLQFE 1196
+ L++A++ VK+++S ISPNF+FMGQLL FE
Sbjct: 552 LSLNDAYDLVKRKKSNISPNFNFMGQLLDFE 582
>ref|XP_543810.2| PREDICTED: similar to Dual specificity protein phosphatase 16
(Mitogen-activated protein kinase phosphatase 7) (MAP
kinase phosphatase 7) (MKP-7) [Canis familiaris].
Length = 663
Score = 159 bits (403), Expect = 7e-39
Identities = 101/301 (33%), Positives = 149/301 (49%), Gaps = 1/301 (0%)
Frame = +3
Query: 306 LRTLLRERAAQCLLLDCRSFFAFNAGHIAGSVNVRFSTIVRRRAKGAMGLEHIVPNAELR 485
L LL + LL+D R F +N HI ++N+ S +++RR + L + +
Sbjct: 15 LVALLESGTEKVLLIDSRPFVEYNTSHILEAININCSKLMKRRLQQDKVLITELIQHSAK 74
Query: 486 GRLLAGAYHAVVLLDERSAALECAKRDGTLALAAGALCREARGAQIFLLKGGYEAFSVSC 665
++ VV+ D+ S + D L + G L E + LL GG+ FS
Sbjct: 75 HKVDIDCSQKVVVYDQSSQDVASLSSDCFLTVLLGKL--EKSFNSVHLLAGGFAEFSRCF 132
Query: 666 PELCSKQSTPMGLSLPLSTSVPDSTESGCSSCSTPLYDQGGPVEILPFLYLGSAYHASRK 845
P LC +S VP C + GP ILP LYLG K
Sbjct: 133 PGLCEGKSA----------LVPTCISQPCLPVANI-----GPTRILPNLYLGCQRDVLNK 177
Query: 846 DMLDALGITALINVSANCPN-HFEGHYQYKSIPVEDNHKADISSWFNEAIDFIDSIKNAG 1022
+++ GI ++N S CP F + +PV D+ I W ++++DFI+ K +
Sbjct: 178 ELMQQNGIGYVLNASNTCPKPDFIPESHFLRVPVNDSFCEKILPWLDKSVDFIEKAKASN 237
Query: 1023 GRVFVHCQAGISRSATICLAYLMRTNRVKLDEAFEFVKQRRSIISPNFSFMGQLLQFESQ 1202
GRV VHC AGISRSATI +AY+M+ + LDEA+ FVK++R ISPNF+F+GQLL +E +
Sbjct: 238 GRVLVHCLAGISRSATIAIAYIMKRMDMSLDEAYRFVKEKRPTISPNFNFLGQLLDYEKK 297
Query: 1203 V 1205
+
Sbjct: 298 I 298
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 74,803,349
Number of extensions: 2027827
Number of successful extensions: 8668
Number of sequences better than 1.0e-05: 41
Number of HSP's gapped: 8608
Number of HSP's successfully gapped: 42
Length of query: 654
Length of database: 18,874,504
Length adjustment: 109
Effective length of query: 545
Effective length of database: 15,240,880
Effective search space: 8306279600
Effective search space used: 8306279600
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-001005
(1963 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_004408.1| dual specificity protein phosphatase 1 [Homo sa... 708 0.0
Alignment gi|NP_001385.1| dual specificity protein phosphatase 4 isoform ... 456 e-128
Alignment gi|NP_476499.1| dual specificity protein phosphatase 4 isoform ... 358 1e-98
Alignment gi|NP_004409.1| dual specificity protein phosphatase 2 [Homo sa... 308 9e-84
Alignment gi|NP_004410.3| dual specificity protein phosphatase 5 [Homo sa... 296 5e-80
Alignment gi|NP_001938.2| dual specificity protein phosphatase 7 [Homo sa... 181 2e-45
Alignment gi|NP_001386.1| dual specificity protein phosphatase 9 [Homo sa... 167 3e-41
Alignment gi|NP_001937.2| dual specificity protein phosphatase 6 isoform ... 166 7e-41
Alignment gi|NP_004411.2| dual specificity protein phosphatase 8 [Homo sa... 166 9e-41
Alignment gi|NP_085143.1| dual specificity protein phosphatase 16 [Homo s... 158 2e-38
>ref|NP_004408.1| dual specificity protein phosphatase 1 [Homo sapiens].
Length = 367
Score = 708 bits (1828), Expect = 0.0
Identities = 355/367 (96%), Positives = 358/367 (97%)
Frame = +3
Query: 270 MVMEVGSLDAGGLRTLLRERAAQCLLLDCRSFFAFNAGHIAGSVNVRFSTIVRRRAKGAM 449
MVMEVG+LDAGGLR LL ERAAQCLLLDCRSFFAFNAGHIAGSVNVRFSTIVRRRAKGAM
Sbjct: 1 MVMEVGTLDAGGLRALLGERAAQCLLLDCRSFFAFNAGHIAGSVNVRFSTIVRRRAKGAM 60
Query: 450 GLEHIVPNAELRGRLLAGAYHAVVLLDERSAALECAKRDGTLALAAGALCREARGAQIFL 629
GLEHIVPNAELRGRLLAGAYHAVVLLDERSAAL+ AKRDGTLALAAGALCREAR AQ+F
Sbjct: 61 GLEHIVPNAELRGRLLAGAYHAVVLLDERSAALDGAKRDGTLALAAGALCREARAAQVFF 120
Query: 630 LKGGYEAFSVSCPELCSKQSTPMGLSLPLSTSVPDSTESGCSSCSTPLYDQGGPVEILPF 809
LKGGYEAFS SCPELCSKQSTPMGLSLPLSTSVPDS ESGCSSCSTPLYDQGGPVEILPF
Sbjct: 121 LKGGYEAFSASCPELCSKQSTPMGLSLPLSTSVPDSAESGCSSCSTPLYDQGGPVEILPF 180
Query: 810 LYLGSAYHASRKDMLDALGITALINVSANCPNHFEGHYQYKSIPVEDNHKADISSWFNEA 989
LYLGSAYHASRKDMLDALGITALINVSANCPNHFEGHYQYKSIPVEDNHKADISSWFNEA
Sbjct: 181 LYLGSAYHASRKDMLDALGITALINVSANCPNHFEGHYQYKSIPVEDNHKADISSWFNEA 240
Query: 990 IDFIDSIKNAGGRVFVHCQAGISRSATICLAYLMRTNRVKLDEAFEFVKQRRSIISPNFS 1169
IDFIDSIKNAGGRVFVHCQAGISRSATICLAYLMRTNRVKLDEAFEFVKQRRSIISPNFS
Sbjct: 241 IDFIDSIKNAGGRVFVHCQAGISRSATICLAYLMRTNRVKLDEAFEFVKQRRSIISPNFS 300
Query: 1170 FMGQLLQFESQVLAPHCSAEAGSPAMAVLDRGASTTTVFNFPVSIPVHPTNSALSYLQSP 1349
FMGQLLQFESQVLAPHCSAEAGSPAMAVLDRG STTTVFNFPVSIPVH TNSALSYLQSP
Sbjct: 301 FMGQLLQFESQVLAPHCSAEAGSPAMAVLDRGTSTTTVFNFPVSIPVHSTNSALSYLQSP 360
Query: 1350 ITTSPSC 1370
ITTSPSC
Sbjct: 361 ITTSPSC 367
>ref|NP_001385.1| dual specificity protein phosphatase 4 isoform 1 [Homo sapiens].
Length = 394
Score = 456 bits (1174), Expect = e-128
Identities = 235/368 (63%), Positives = 276/368 (75%), Gaps = 6/368 (1%)
Frame = +3
Query: 285 GSLDAGGLRTLLRERAAQCLLLDCRSFFAFNAGHIAGSVNVRFSTIVRRRAKGAMGLEHI 464
G+ +G TL +CLLLDCR F A +AG+I GSVNVR +TIVRRRAKG++ LE I
Sbjct: 27 GAGGSGSHGTLGLPSGGKCLLLDCRPFLAHSAGYILGSVNVRCNTIVRRRAKGSVSLEQI 86
Query: 465 VP-NAELRGRLLAGAYHAVVLLDERSAALECAKRDGTLALAAGALCREARGAQIFLLKGG 641
+P E+R RL +G Y AV++ DERS E + D T++L AL R A I LLKGG
Sbjct: 87 LPAEEEVRARLRSGLYSAVIVYDERSPRAESLREDSTVSLVVQALRRNAERTDICLLKGG 146
Query: 642 YEAFSVSCPELCSKQSTPMGLSLPLSTSVPDSTESGCSSCSTPLYDQGGPVEILPFLYLG 821
YE FS PE CSK + P+ S + + GCSSC TPL+DQGGPVEILPFLYLG
Sbjct: 147 YERFSSEYPEFCSKTKALAAIPPPVPPSATEPLDLGCSSCGTPLHDQGGPVEILPFLYLG 206
Query: 822 SAYHASRKDMLDALGITALINVSANCPNHFEGHYQYKSIPVEDNHKADISSWFNEAIDFI 1001
SAYHA+R+DMLDALGITAL+NVS++CPNHFEGHYQYK IPVEDNHKADISSWF EAI++I
Sbjct: 207 SAYHAARRDMLDALGITALLNVSSDCPNHFEGHYQYKCIPVEDNHKADISSWFMEAIEYI 266
Query: 1002 DSIKNAGGRVFVHCQAGISRSATICLAYLMRTNRVKLDEAFEFVKQRRSIISPNFSFMGQ 1181
D++K+ GRV VHCQAGISRSATICLAYLM RV+L+EAFEFVKQRRSIISPNFSFMGQ
Sbjct: 267 DAVKDCRGRVLVHCQAGISRSATICLAYLMMKKRVRLEEAFEFVKQRRSIISPNFSFMGQ 326
Query: 1182 LLQFESQVLAPHCSAEAGSPAMAVLDRGASTTT-----VFNFPVSIPVHPTNSALSYLQS 1346
LLQFESQVLA C+AEA SP+ + +RG + T VF+FPVS+ VH S+L YL S
Sbjct: 327 LLQFESQVLATSCAAEAASPSGPLRERGKTPATPTSQFVFSFPVSVGVHSAPSSLPYLHS 386
Query: 1347 PITTSPSC 1370
PITTSPSC
Sbjct: 387 PITTSPSC 394
>ref|NP_476499.1| dual specificity protein phosphatase 4 isoform 2 [Homo sapiens].
Length = 303
Score = 358 bits (919), Expect = 1e-98
Identities = 181/271 (66%), Positives = 209/271 (77%), Gaps = 5/271 (1%)
Frame = +3
Query: 573 LALAAGALCREARGAQIFLLKGGYEAFSVSCPELCSKQSTPMGLSLPLSTSVPDSTESGC 752
LA + LC E++G GYE FS PE CSK + P+ S + + GC
Sbjct: 41 LAGRSRCLCSESQG--------GYERFSSEYPEFCSKTKALAAIPPPVPPSATEPLDLGC 92
Query: 753 SSCSTPLYDQGGPVEILPFLYLGSAYHASRKDMLDALGITALINVSANCPNHFEGHYQYK 932
SSC TPL+DQGGPVEILPFLYLGSAYHA+R+DMLDALGITAL+NVS++CPNHFEGHYQYK
Sbjct: 93 SSCGTPLHDQGGPVEILPFLYLGSAYHAARRDMLDALGITALLNVSSDCPNHFEGHYQYK 152
Query: 933 SIPVEDNHKADISSWFNEAIDFIDSIKNAGGRVFVHCQAGISRSATICLAYLMRTNRVKL 1112
IPVEDNHKADISSWF EAI++ID++K+ GRV VHCQAGISRSATICLAYLM RV+L
Sbjct: 153 CIPVEDNHKADISSWFMEAIEYIDAVKDCRGRVLVHCQAGISRSATICLAYLMMKKRVRL 212
Query: 1113 DEAFEFVKQRRSIISPNFSFMGQLLQFESQVLAPHCSAEAGSPAMAVLDRGASTTT---- 1280
+EAFEFVKQRRSIISPNFSFMGQLLQFESQVLA C+AEA SP+ + +RG + T
Sbjct: 213 EEAFEFVKQRRSIISPNFSFMGQLLQFESQVLATSCAAEAASPSGPLRERGKTPATPTSQ 272
Query: 1281 -VFNFPVSIPVHPTNSALSYLQSPITTSPSC 1370
VF+FPVS+ VH S+L YL SPITTSPSC
Sbjct: 273 FVFSFPVSVGVHSAPSSLPYLHSPITTSPSC 303
>ref|NP_004409.1| dual specificity protein phosphatase 2 [Homo sapiens].
Length = 314
Score = 308 bits (790), Expect = 9e-84
Identities = 166/312 (53%), Positives = 214/312 (68%), Gaps = 6/312 (1%)
Frame = +3
Query: 291 LDAGGLRTLLRE--RAAQCLLLDCRSFFAFNAGHIAGSVNVRFSTIVRRRAKG--AMGLE 458
L+ L TLLR+ A + LLLDCR F AF H+ + V ++ ++RRRA+G A L
Sbjct: 9 LECAALGTLLRDPREAERTLLLDCRPFLAFCRRHVRAARPVPWNALLRRRARGPPAAVLA 68
Query: 459 HIVPNAELRGRLLAGAYHAVVLLDERSAALECAKRDGTLALAAGALCREARGAQ--IFLL 632
++P+ LR RL+ G V+LDE SA++ + D + AL E R ++ L
Sbjct: 69 CLLPDRALRTRLVRGELARAVVLDEGSASVAELRPDSPAHVLLAALLHETRAGPTAVYFL 128
Query: 633 KGGYEAFSVSCPELCSKQSTPMGLSLPLSTSVPDSTESGCSSCSTPLYDQGGPVEILPFL 812
+GG++ F CP+LCS+ P +LP P ++ S P+YDQGGPVEILP+L
Sbjct: 129 RGGFDGFQGCCPDLCSEAPAP---ALP-----PTGDKTSRSDSRAPVYDQGGPVEILPYL 180
Query: 813 YLGSAYHASRKDMLDALGITALINVSANCPNHFEGHYQYKSIPVEDNHKADISSWFNEAI 992
+LGS H+S L A GITA++NVSA+CPNHFEG ++YKSIPVEDN +IS+WF EAI
Sbjct: 181 FLGSCSHSSDLQGLQACGITAVLNVSASCPNHFEGLFRYKSIPVEDNQMVEISAWFQEAI 240
Query: 993 DFIDSIKNAGGRVFVHCQAGISRSATICLAYLMRTNRVKLDEAFEFVKQRRSIISPNFSF 1172
FID +KN+GGRV VHCQAGISRSATICLAYLM++ RV+LDEAF+FVKQRR +ISPNFSF
Sbjct: 241 GFIDWVKNSGGRVLVHCQAGISRSATICLAYLMQSRRVRLDEAFDFVKQRRGVISPNFSF 300
Query: 1173 MGQLLQFESQVL 1208
MGQLLQFE+QVL
Sbjct: 301 MGQLLQFETQVL 312
>ref|NP_004410.3| dual specificity protein phosphatase 5 [Homo sapiens].
Length = 384
Score = 296 bits (758), Expect = 5e-80
Identities = 179/394 (45%), Positives = 238/394 (60%), Gaps = 29/394 (7%)
Frame = +3
Query: 276 MEVGSLDAGGLRTLLR-ERAAQCLLLDCRSFFAFNAGHIAGSVNVRFSTIVRRRAKG-AM 449
M+V SLD LR +LR E AA+C++LDCR + AF A ++ GS+NV +++V RRA+G A+
Sbjct: 1 MKVTSLDGRQLRKMLRKEAAARCVVLDCRPYLAFAASNVRGSLNVNLNSVVLRRARGGAV 60
Query: 450 GLEHIVPNAELRGRLL---AGAYHAVVLLDERSAALECAKRDGTLALAAGAL--CREARG 614
+++P+ R RLL G AVV+LD+ S + + + + +L C A G
Sbjct: 61 SARYVLPDEAARARLLQEGGGGVAAVVVLDQGSRHWQKLREESAARVVLTSLLACLPA-G 119
Query: 615 AQIFLLKGGYEAFSVSCPELCSKQSTPMGLSLPLSTSVPDSTESGCSSCSTPL------- 773
+++ LKGGYE F PE C P+S +S + S C P+
Sbjct: 120 PRVYFLKGGYETFYSEYPECCVDVK-------PISQEKIESERALISQCGKPVVNVSYRP 172
Query: 774 -YDQGGPVEILPFLYLGSAYHASRKDMLDALGITALINVSANCPNHFEGHYQYKSIPVED 950
YDQGGPVEILPFLYLGSAYHAS+ + L L ITAL+NVS H YK IPVED
Sbjct: 173 AYDQGGPVEILPFLYLGSAYHASKCEFLANLHITALLNVSRRTSEACATHLHYKWIPVED 232
Query: 951 NHKADISSWFNEAIDFIDSIKNAGGRVFVHCQAGISRSATICLAYLMRTNRVKLDEAFEF 1130
+H ADISS F EAIDFID ++ GG+V VHC+AGISRS TIC+AYLM+T + +L EAF++
Sbjct: 233 SHTADISSHFQEAIDFIDCVREKGGKVLVHCEAGISRSPTICMAYLMKTKQFRLKEAFDY 292
Query: 1131 VKQRRSIISPNFSFMGQLLQFESQVL-------APHCSAE-AGSPAMAVLD------RGA 1268
+KQRRS++SPNF FMGQLLQ+ES++L P C E AGS + L +GA
Sbjct: 293 IKQRRSMVSPNFGFMGQLLQYESEILPSTPNPQPPSCQGEAAGSSLIGHLQTLSPDMQGA 352
Query: 1269 STTTVFNFPVSIPVHPTNSALSYLQSPITTSPSC 1370
T + +P H T S LS +SP+ T+ SC
Sbjct: 353 YCTFPASVLAPVPTHSTVSELS--RSPVATATSC 384
>ref|NP_001938.2| dual specificity protein phosphatase 7 [Homo sapiens].
Length = 419
Score = 181 bits (459), Expect = 2e-45
Identities = 121/329 (36%), Positives = 174/329 (52%), Gaps = 27/329 (8%)
Frame = +3
Query: 333 AQCLLLDCRSFFAFNAGHIAGSVNVRF-STIVRRRAKGAMGLEHIVPNAELRGRLLAGAY 509
A LLLDCR F + HI ++N+ ++RR KG + + I+PN + R
Sbjct: 70 ASLLLLDCRPHELFESSHIETAINLAIPGLMLRRLRKGNLPIRSIIPNHADKERFATRCK 129
Query: 510 HAVVLLDERSAALECAKRDGTLALAAGALCREAR--GAQIFLLKGGYEAFSVSCPELC-- 677
A VLL + + A E G A G L ++ R G Q + L+GG+ F E C
Sbjct: 130 AATVLLYDEATA-EWQPEPGAPASVLGLLLQKLRDDGCQAYYLQGGFNKFQTEYSEHCET 188
Query: 678 ------SKQSTP----MGLS-LPLSTSVPD--------STESGCSSCSTPLYDQGGPVEI 800
S S+P +GL L +S+ D S+ + P PV+I
Sbjct: 189 NVDSSSSPSSSPPTSVLGLGGLRISSDCSDGESDRELPSSATESDGSPVPSSQPAFPVQI 248
Query: 801 LPFLYLGSAYHASRKDMLDALGITALINVSANCPNHFE--GHYQYKSIPVEDNHKADISS 974
LP+LYLG A ++ D+L GI ++NV+ N PN FE G + YK IP+ D+ ++S
Sbjct: 249 LPYLYLGCAKDSTNLDVLGKYGIKYILNVTPNLPNAFEHGGEFTYKQIPISDHWSQNLSQ 308
Query: 975 WFNEAIDFIDSIKNAGGRVFVHCQAGISRSATICLAYLMRTNRVKLDEAFEFVKQRRSII 1154
+F EAI FID ++ V VHC AGISRS T+ +AYLM+ + L++A++FVK+++S I
Sbjct: 309 FFPEAISFIDEARSKKCGVLVHCLAGISRSVTVTVAYLMQKMNLSLNDAYDFVKRKKSNI 368
Query: 1155 SPNFSFMGQLLQFESQV-LAPHCSAEAGS 1238
SPNF+FMGQLL FE + L+ C A S
Sbjct: 369 SPNFNFMGQLLDFERTLGLSSPCDNHASS 397
>ref|NP_001386.1| dual specificity protein phosphatase 9 [Homo sapiens].
Length = 384
Score = 167 bits (423), Expect = 3e-41
Identities = 126/371 (33%), Positives = 188/371 (50%), Gaps = 39/371 (10%)
Frame = +3
Query: 306 LRTLLRERAAQCLLLDCRSFFAFNAGHIAGSVNVRF-STIVRRRAKGAMGLEHIVPNAEL 482
LR L + LLLDCRS + + I G+++V + ++RR +G++ + ++P L
Sbjct: 11 LRRELSPPRPRLLLLDCRSRELYESARIGGALSVALPALLLRRLRRGSLSVRALLPGPPL 70
Query: 483 RGRLLAGAYHAVVLLDE-----RSAALECAKRDGTLALAAGALCREAR--GAQIFLLKGG 641
+ A V+L D+ R E + G L ++ R G + L+GG
Sbjct: 71 QPPPPA----PVLLYDQGGGRRRRGEAEAEAEEWEAESVLGTLLQKLREEGYLAYYLQGG 126
Query: 642 YEAFSVSCPELC----------SKQSTP-----MGL-SLPLSTSVPDS-TESGCSSCSTP 770
+ F CP LC S P +GL SL L + D+ +E+ S S
Sbjct: 127 FSRFQAECPHLCETSLAGRAGSSMAPVPGPVPVVGLGSLCLGSDCSDAESEADRDSMSCG 186
Query: 771 LYDQGG-----------PVEILPFLYLGSAYHASRKDMLDALGITALINVSANCPNHFE- 914
L +G PV+ILP LYLGSA ++ + L LGI ++NV+ N PN FE
Sbjct: 187 LDSEGATPPPVGLRASFPVQILPNLYLGSARDSANLESLAKLGIRYILNVTPNLPNFFEK 246
Query: 915 -GHYQYKSIPVEDNHKADISSWFNEAIDFIDSIKNAGGRVFVHCQAGISRSATICLAYLM 1091
G + YK IP+ D+ ++S +F EAI+FID + V VHC AG+SRS T+ +AYLM
Sbjct: 247 NGDFHYKQIPISDHWSQNLSRFFPEAIEFIDEALSQNCGVLVHCLAGVSRSVTVTVAYLM 306
Query: 1092 RTNRVKLDEAFEFVKQRRSIISPNFSFMGQLLQFESQV-LAPHCSAEAGSPAMAVLDRGA 1268
+ + L++A++ VK+++S ISPNF+FMGQLL FE + L S E GS A +
Sbjct: 307 QKLHLSLNDAYDLVKRKKSNISPNFNFMGQLLDFERSLRLEERHSQEQGSGGQA--SAAS 364
Query: 1269 STTTVFNFPVS 1301
+ + F P S
Sbjct: 365 NPPSFFTTPTS 375
>ref|NP_001937.2| dual specificity protein phosphatase 6 isoform a [Homo sapiens].
Length = 381
Score = 166 bits (420), Expect = 7e-41
Identities = 115/312 (36%), Positives = 161/312 (51%), Gaps = 27/312 (8%)
Frame = +3
Query: 342 LLLDCRSFFAFNAGHIAGSVNVRFSTIVRRRA-KGAMGLEHIVPNAELRGRLLAGA-YHA 515
LL+DCR + + HI ++NV I+ RR KG + + + E R R
Sbjct: 35 LLMDCRPQELYESSHIESAINVAIPGIMLRRLQKGNLPVRALFTRGEDRDRFTRRCGTDT 94
Query: 516 VVLLDERSAAL-ECAKRDGTLALAAGALCREARGAQIFLLKGGYEAF----SVSCPE--- 671
VVL DE S+ E + L L L E G + F L+GG+ F S+ C
Sbjct: 95 VVLYDESSSDWNENTGGESVLGLLLKKLKDE--GCRAFYLEGGFSKFQAEFSLHCETNLD 152
Query: 672 -LCSKQSTPMGL----SLPLSTSVPDSTESGCSSCSTPLYDQGG----------PVEILP 806
CS S P+ + L +S+ ES D G PVEILP
Sbjct: 153 GSCSSSSPPLPVLGLGGLRISSDSSSDIESDLDRDPNSATDSDGSPLSNSQPSFPVEILP 212
Query: 807 FLYLGSAYHASRKDMLDALGITALINVSANCPNHFE--GHYQYKSIPVEDNHKADISSWF 980
FLYLG A ++ D+L+ GI ++NV+ N PN FE G ++YK IP+ D+ ++S +F
Sbjct: 213 FLYLGCAKDSTNLDVLEEFGIKYILNVTPNLPNLFENAGEFKYKQIPISDHWSQNLSQFF 272
Query: 981 NEAIDFIDSIKNAGGRVFVHCQAGISRSATICLAYLMRTNRVKLDEAFEFVKQRRSIISP 1160
EAI FID + V VHC AGISRS T+ +AYLM+ + +++A++ VK ++S ISP
Sbjct: 273 PEAISFIDEARGKNCGVLVHCLAGISRSVTVTVAYLMQKLNLSMNDAYDIVKMKKSNISP 332
Query: 1161 NFSFMGQLLQFE 1196
NF+FMGQLL FE
Sbjct: 333 NFNFMGQLLDFE 344
>ref|NP_004411.2| dual specificity protein phosphatase 8 [Homo sapiens].
Length = 625
Score = 166 bits (419), Expect = 9e-41
Identities = 112/321 (34%), Positives = 172/321 (53%), Gaps = 3/321 (0%)
Frame = +3
Query: 291 LDAGGLRTLLRERAAQCLLLDCRSFFAFNAGHIAGSVNVRFSTIVRRRAK-GAMGLEHIV 467
+DA L +LLR L++D RSF +N+ H+ SVN+ S +V+RR + G + + ++
Sbjct: 11 MDAKKLASLLRGGPGGPLVIDSRSFVEYNSWHVLSSVNICCSKLVKRRLQQGKVTIAELI 70
Query: 468 PNAELRGRLLAGAYHAVVLLDERSAALECAKRDGTLALAAGALCREARGAQIFLLKGGYE 647
A R ++ A VV+ D+ + D L++ L + + +L GG+
Sbjct: 71 QPAA-RSQVEATEPQDVVVYDQSTRDASVLAADSFLSILLSKL--DGCFDSVAILTGGFA 127
Query: 648 AFSVSCPELCSKQSTPMGLSLPLSTSVPDSTESGCSSCSTPLYDQGGPVEILPFLYLGSA 827
FS P LC + P L LP+S S P C + G ILP LYLGS
Sbjct: 128 TFSSCFPGLC--EGKPAAL-LPMSLSQP------CLPVPSV-----GLTRILPHLYLGSQ 173
Query: 828 YHASRKDMLDALGITALINVSANCPN-HFEGHYQYKSIPVEDNHKADISSWFNEAIDFID 1004
KD++ GI+ ++N S +CP F ++ +P+ DN+ + W +++I+FID
Sbjct: 174 KDVLNKDLMTQNGISYVLNASNSCPKPDFICESRFMRVPINDNYCEKLLPWLDKSIEFID 233
Query: 1005 SIKNAGGRVFVHCQAGISRSATICLAYLMRTNRVKLDEAFEFVKQRRSIISPNFSFMGQL 1184
K + +V VHC AGISRSATI +AY+M+T + D+A+ FVK RR ISPNF+F+GQL
Sbjct: 234 KAKLSSCQVIVHCLAGISRSATIAIAYIMKTMGMSSDDAYRFVKDRRPSISPNFNFLGQL 293
Query: 1185 LQFE-SQVLAPHCSAEAGSPA 1244
L++E S L + G+P+
Sbjct: 294 LEYERSLKLLAALQGDPGTPS 314
>ref|NP_085143.1| dual specificity protein phosphatase 16 [Homo sapiens].
Length = 665
Score = 158 bits (400), Expect = 2e-38
Identities = 101/301 (33%), Positives = 149/301 (49%), Gaps = 1/301 (0%)
Frame = +3
Query: 306 LRTLLRERAAQCLLLDCRSFFAFNAGHIAGSVNVRFSTIVRRRAKGAMGLEHIVPNAELR 485
L LL + LL+D R F +N HI ++N+ S +++RR + L + +
Sbjct: 15 LVALLESGTEKVLLIDSRPFVEYNTSHILEAININCSKLMKRRLQQDKVLITELIQHSAK 74
Query: 486 GRLLAGAYHAVVLLDERSAALECAKRDGTLALAAGALCREARGAQIFLLKGGYEAFSVSC 665
++ VV+ D+ S + D L + G L E + LL GG+ FS
Sbjct: 75 HKVDIDCSQKVVVYDQSSQDVASLSSDCFLTVLLGKL--EKSFNSVHLLAGGFAEFSRCF 132
Query: 666 PELCSKQSTPMGLSLPLSTSVPDSTESGCSSCSTPLYDQGGPVEILPFLYLGSAYHASRK 845
P LC +ST VP C + GP ILP LYLG K
Sbjct: 133 PGLCEGKST----------LVPTCISQPCLPVANI-----GPTRILPNLYLGCQRDVLNK 177
Query: 846 DMLDALGITALINVSANCPN-HFEGHYQYKSIPVEDNHKADISSWFNEAIDFIDSIKNAG 1022
+++ GI ++N S CP F + +PV D+ I W ++++DFI+ K +
Sbjct: 178 ELMQQNGIGYVLNASNTCPKPDFIPESHFLRVPVNDSFCEKILPWLDKSVDFIEKAKASN 237
Query: 1023 GRVFVHCQAGISRSATICLAYLMRTNRVKLDEAFEFVKQRRSIISPNFSFMGQLLQFESQ 1202
G V VHC AGISRSATI +AY+M+ + LDEA+ FVK++R ISPNF+F+GQLL +E +
Sbjct: 238 GCVLVHCLAGISRSATIAIAYIMKRMDMSLDEAYRFVKEKRPTISPNFNFLGQLLDYEKK 297
Query: 1203 V 1205
+
Sbjct: 298 I 298
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 73,179,202
Number of extensions: 1990072
Number of successful extensions: 8685
Number of sequences better than 1.0e-05: 40
Number of HSP's gapped: 8570
Number of HSP's successfully gapped: 40
Length of query: 654
Length of database: 18,297,164
Length adjustment: 109
Effective length of query: 545
Effective length of database: 14,704,088
Effective search space: 8013727960
Effective search space used: 8013727960
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-001005
(1963 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_038670.1| dual specificity protein phosphatase 1 [Mus mus... 696 0.0
Alignment gi|NP_795907.1| dual specificity protein phosphatase 4 [Mus mus... 455 e-128
Alignment gi|NP_034220.2| dual specificity protein phosphatase 2 [Mus mus... 311 9e-85
Alignment gi|NP_001078859.1| dual specificity protein phosphatase 5 [Mus ... 290 4e-78
Alignment gi|NP_703189.3| dual specificity protein phosphatase 7 [Mus mus... 180 3e-45
Alignment gi|NP_080544.1| dual specificity protein phosphatase 6 [Mus mus... 166 5e-41
Alignment gi|NP_032774.1| dual specificity protein phosphatase 8 [Mus mus... 159 6e-39
Alignment gi|NP_569714.2| dual specificity phosphatase 16 isoform A1 [Mus... 159 7e-39
Alignment gi|NP_071302.2| dual specificity protein phosphatase 10 [Mus mu... 153 5e-37
Alignment gi|NP_083628.3| dual specificity protein phosphatase 9 [Mus mus... 142 9e-34
>ref|NP_038670.1| dual specificity protein phosphatase 1 [Mus musculus].
Length = 367
Score = 696 bits (1796), Expect = 0.0
Identities = 348/367 (94%), Positives = 355/367 (96%)
Frame = +3
Query: 270 MVMEVGSLDAGGLRTLLRERAAQCLLLDCRSFFAFNAGHIAGSVNVRFSTIVRRRAKGAM 449
MVMEVG LDAGGLR LLRE AAQCLLLDCRSFFAFNAGHIAGSVNVRFSTIVRRRAKGAM
Sbjct: 1 MVMEVGILDAGGLRALLREGAAQCLLLDCRSFFAFNAGHIAGSVNVRFSTIVRRRAKGAM 60
Query: 450 GLEHIVPNAELRGRLLAGAYHAVVLLDERSAALECAKRDGTLALAAGALCREARGAQIFL 629
GLEHIVPNAELRGRLLAGAYHAVVLLDERSA+L+ AKRDGTLALAAGALCREAR Q+F
Sbjct: 61 GLEHIVPNAELRGRLLAGAYHAVVLLDERSASLDGAKRDGTLALAAGALCREARSTQVFF 120
Query: 630 LKGGYEAFSVSCPELCSKQSTPMGLSLPLSTSVPDSTESGCSSCSTPLYDQGGPVEILPF 809
L+GGYEAFS SCPELCSKQSTP GLSLPLSTSVPDS ESGCSSCSTPLYDQGGPVEIL F
Sbjct: 121 LQGGYEAFSASCPELCSKQSTPTGLSLPLSTSVPDSAESGCSSCSTPLYDQGGPVEILSF 180
Query: 810 LYLGSAYHASRKDMLDALGITALINVSANCPNHFEGHYQYKSIPVEDNHKADISSWFNEA 989
LYLGSAYHASRKDMLDALGITALINVSANCPNHFEGHYQYKSIPVEDNHKADISSWFNEA
Sbjct: 181 LYLGSAYHASRKDMLDALGITALINVSANCPNHFEGHYQYKSIPVEDNHKADISSWFNEA 240
Query: 990 IDFIDSIKNAGGRVFVHCQAGISRSATICLAYLMRTNRVKLDEAFEFVKQRRSIISPNFS 1169
IDFIDSIK+AGGRVFVHCQAGISRSATICLAYLMRTNRVKLDEAFEFVKQRRSIISPNFS
Sbjct: 241 IDFIDSIKDAGGRVFVHCQAGISRSATICLAYLMRTNRVKLDEAFEFVKQRRSIISPNFS 300
Query: 1170 FMGQLLQFESQVLAPHCSAEAGSPAMAVLDRGASTTTVFNFPVSIPVHPTNSALSYLQSP 1349
FMGQLLQFESQVLAPHCSAEAGSPAMAVLDRG STTTVFNFPVSIPVHPTNSAL+YL+SP
Sbjct: 301 FMGQLLQFESQVLAPHCSAEAGSPAMAVLDRGTSTTTVFNFPVSIPVHPTNSALNYLKSP 360
Query: 1350 ITTSPSC 1370
ITTSPSC
Sbjct: 361 ITTSPSC 367
>ref|NP_795907.1| dual specificity protein phosphatase 4 [Mus musculus].
Length = 398
Score = 455 bits (1171), Expect = e-128
Identities = 232/351 (66%), Positives = 270/351 (76%), Gaps = 6/351 (1%)
Frame = +3
Query: 336 QCLLLDCRSFFAFNAGHIAGSVNVRFSTIVRRRAKGAMGLEHIVP-NAELRGRLLAGAYH 512
+CLLLDCR F A +AG+I GSVNVR +TIVRRRAKG++ LE I+P E+R RL +G Y
Sbjct: 48 KCLLLDCRPFLAHSAGYIRGSVNVRCNTIVRRRAKGSVSLEQILPAEEEVRARLRSGLYS 107
Query: 513 AVVLLDERSAALECAKRDGTLALAAGALCREARGAQIFLLKGGYEAFSVSCPELCSKQST 692
AV++ DERS E + D T++L AL R A I LLKGGYE FS PE CSK
Sbjct: 108 AVIVYDERSPRAESLREDSTVSLVVQALRRNAERTDICLLKGGYERFSSEYPEFCSKTKA 167
Query: 693 PMGLSLPLSTSVPDSTESGCSSCSTPLYDQGGPVEILPFLYLGSAYHASRKDMLDALGIT 872
+ P+ S +S + GCSSC TPL+DQGGPVEILPFLYLGSAYHA+R+DMLDALGIT
Sbjct: 168 LAAIPPPVPPSTNESLDLGCSSCGTPLHDQGGPVEILPFLYLGSAYHAARRDMLDALGIT 227
Query: 873 ALINVSANCPNHFEGHYQYKSIPVEDNHKADISSWFNEAIDFIDSIKNAGGRVFVHCQAG 1052
AL+NVS++CPNHFEGHYQYK IPVEDNHKADISSWF EAI++ID++K+ GRV VHCQAG
Sbjct: 228 ALLNVSSDCPNHFEGHYQYKCIPVEDNHKADISSWFMEAIEYIDAVKDCRGRVLVHCQAG 287
Query: 1053 ISRSATICLAYLMRTNRVKLDEAFEFVKQRRSIISPNFSFMGQLLQFESQVLAPHCSAEA 1232
ISRSATICLAYLM RV+L+EAFEFVKQRRSIISPNFSFMGQLLQFESQVL C+AEA
Sbjct: 288 ISRSATICLAYLMMKKRVRLEEAFEFVKQRRSIISPNFSFMGQLLQFESQVLTTSCAAEA 347
Query: 1233 GSPAMAVLDRGASTTT-----VFNFPVSIPVHPTNSALSYLQSPITTSPSC 1370
SP+ + +RG +T T VF+FPVS+ VH S L YL SPITTSPSC
Sbjct: 348 ASPSGPLRERGKATPTPTSQFVFSFPVSVGVHAAPSNLPYLHSPITTSPSC 398
>ref|NP_034220.2| dual specificity protein phosphatase 2 [Mus musculus].
Length = 318
Score = 311 bits (798), Expect = 9e-85
Identities = 171/321 (53%), Positives = 214/321 (66%), Gaps = 7/321 (2%)
Frame = +3
Query: 267 AMVMEVG-SLDAGGLRTLLRE--RAAQCLLLDCRSFFAFNAGHIAGSVNVRFSTIVRRRA 437
AM +E L+ L LLRE A + LLLDCR F AF H+ + V ++ ++RRRA
Sbjct: 4 AMGLETACELECAALGALLREPREAERTLLLDCRPFLAFCRSHVRAARPVPWNALLRRRA 63
Query: 438 KG--AMGLEHIVPNAELRGRLLAGAYHAVVLLDERSAALECAKRDGTLALAAGALCREAR 611
+G A L ++P+ LR RL G V+LDE SA++ DG L AL E R
Sbjct: 64 RGTPAAALACLLPDRALRARLGRGELARAVVLDESSASVAELPPDGPAHLLLAALQHEMR 123
Query: 612 GAQ--IFLLKGGYEAFSVSCPELCSKQSTPMGLSLPLSTSVPDSTESGCSSCSTPLYDQG 785
G + L+GG+++F CP+LCS+ P P E+ S P+YDQG
Sbjct: 124 GGPTTVCFLRGGFKSFQTYCPDLCSEA--------PAQALPPAGAENSNSDPRVPIYDQG 175
Query: 786 GPVEILPFLYLGSAYHASRKDMLDALGITALINVSANCPNHFEGHYQYKSIPVEDNHKAD 965
GPVEILP+LYLGS H+S L A GITA++NVSA+CPNHFEG + YKSIPVEDN +
Sbjct: 176 GPVEILPYLYLGSCNHSSDLQGLQACGITAVLNVSASCPNHFEGLFHYKSIPVEDNQMVE 235
Query: 966 ISSWFNEAIDFIDSIKNAGGRVFVHCQAGISRSATICLAYLMRTNRVKLDEAFEFVKQRR 1145
IS+WF EAI FIDS+KN+GGRV VHCQAGISRSATICLAYL++++RV+LDEAF+FVKQRR
Sbjct: 236 ISAWFQEAISFIDSVKNSGGRVLVHCQAGISRSATICLAYLIQSHRVRLDEAFDFVKQRR 295
Query: 1146 SIISPNFSFMGQLLQFESQVL 1208
+ISPNFSFMGQLLQ E+QVL
Sbjct: 296 GVISPNFSFMGQLLQLETQVL 316
>ref|NP_001078859.1| dual specificity protein phosphatase 5 [Mus musculus].
Length = 384
Score = 290 bits (741), Expect = 4e-78
Identities = 176/393 (44%), Positives = 232/393 (59%), Gaps = 28/393 (7%)
Frame = +3
Query: 276 MEVGSLDAGGLRTLLRERA-AQCLLLDCRSFFAFNAGHIAGSVNVRFSTIVRRRAKG-AM 449
M+V SLD LR +LR+ A A+C++LDCR + AF A + GS+NV +++V RRA+G A+
Sbjct: 1 MKVTSLDGRQLRKMLRKEAEARCVVLDCRPYLAFAASSVRGSLNVNLNSVVLRRARGGAV 60
Query: 450 GLEHIVPNAELRGRLL---AGAYHAVVLLDERSAALECAKRDGTLALAAGAL--CREARG 614
+++P+ R RLL G AVV+LD+ S + + + + +L C A G
Sbjct: 61 SARYVLPDEAARARLLQEGGGGVAAVVVLDQGSRHWQKLREESAARVVLTSLLACLPA-G 119
Query: 615 AQIFLLKGGYEAFSVSCPELCSKQSTPMGLSLPLSTSVPDSTESGCSSCSTPL------- 773
+++ LKGGYE F PE C P S + S S C P+
Sbjct: 120 PRVYFLKGGYETFYSQYPECCVDVK-------PTSQEKIEGERSLLSQCGKPVLSVAYRP 172
Query: 774 -YDQGGPVEILPFLYLGSAYHASRKDMLDALGITALINVSANCPNHFEGHYQYKSIPVED 950
YDQGGPVEILPFLYLGSAYHAS+ + L L ITAL+NVS H YK IPVED
Sbjct: 173 AYDQGGPVEILPFLYLGSAYHASKCEFLANLHITALLNVSRRTSEACTTHLHYKWIPVED 232
Query: 951 NHKADISSWFNEAIDFIDSIKNAGGRVFVHCQAGISRSATICLAYLMRTNRVKLDEAFEF 1130
+H ADISS F EAIDFID ++ GG+V VHC+AG+SRS TIC+AYLM+T + +L EAF++
Sbjct: 233 SHTADISSHFQEAIDFIDCVREEGGKVLVHCEAGVSRSPTICMAYLMKTKQFRLKEAFDY 292
Query: 1131 VKQRRSIISPNFSFMGQLLQFESQVL-------APHCSAEAGSPA-----MAVLDRGAST 1274
VKQRRS++SPNF FMGQLLQ+ES++L P C EA S + T
Sbjct: 293 VKQRRSVVSPNFGFMGQLLQYESEILPSTPTLQPPSCQGEAASSTFIGHLQTLSPDMQGT 352
Query: 1275 TTVFNFPVSIPVHPTNSALSYL-QSPITTSPSC 1370
F V PV PT+S + L +SP+ T+ SC
Sbjct: 353 YCTFRTSVLAPV-PTHSTVPELHRSPVATATSC 384
>ref|NP_703189.3| dual specificity protein phosphatase 7 [Mus musculus].
Length = 422
Score = 180 bits (457), Expect = 3e-45
Identities = 125/351 (35%), Positives = 180/351 (51%), Gaps = 28/351 (7%)
Frame = +3
Query: 333 AQCLLLDCRSFFAFNAGHIAGSVNVRF-STIVRRRAKGAMGLEHIVPNAELRGRLLAGAY 509
A LLLDCR F + HI ++N+ ++RR KG + + I+PN + R
Sbjct: 73 ASLLLLDCRPHELFESSHIETAINLAIPGLMLRRLRKGNLPIRSIIPNHADKERFATRCK 132
Query: 510 HAVVLLDERSAALECAKRDGTLALAAGALCREAR--GAQIFLLKGGYEAFSVSCPELCS- 680
A VLL + + A E G A G L ++ R G Q + L+GG+ F E C
Sbjct: 133 AATVLLYDEATA-EWQPEPGAPASVLGLLLQKLRDDGCQAYYLQGGFNKFQTEYSEHCET 191
Query: 681 ---KQSTPMGL---------SLPLSTSVPD--------STESGCSSCSTPLYDQGGPVEI 800
S+P G L +S+ D S+ + P PV+I
Sbjct: 192 NVDSSSSPSGSPPTSVLGLGGLRISSDCSDGESDRELPSSATESDGSPVPSSQPAFPVQI 251
Query: 801 LPFLYLGSAYHASRKDMLDALGITALINVSANCPNHFE--GHYQYKSIPVEDNHKADISS 974
LP+LYLG A ++ D+L GI ++NV+ N PN FE G + YK IP+ D+ ++S
Sbjct: 252 LPYLYLGCAKDSTNLDVLGKYGIKYILNVTPNLPNAFEHGGEFTYKQIPISDHWSQNLSQ 311
Query: 975 WFNEAIDFIDSIKNAGGRVFVHCQAGISRSATICLAYLMRTNRVKLDEAFEFVKQRRSII 1154
+F EAI FID ++ V VHC AGISRS T+ +AYLM+ + L++A++FVK+++S I
Sbjct: 312 FFPEAISFIDEARSKKCGVLVHCLAGISRSVTVTVAYLMQKMNLSLNDAYDFVKRKKSNI 371
Query: 1155 SPNFSFMGQLLQFESQV-LAPHCSAEAGSPAMAVLDRGASTTTVFN-FPVS 1301
SPNF+FMGQLL FE + L+ C A S + ST T N FP++
Sbjct: 372 SPNFNFMGQLLDFERTLGLSSPCDNHAPSEQLYF-----STPTNHNLFPIN 417
>ref|NP_080544.1| dual specificity protein phosphatase 6 [Mus musculus].
Length = 381
Score = 166 bits (421), Expect = 5e-41
Identities = 116/330 (35%), Positives = 166/330 (50%), Gaps = 28/330 (8%)
Frame = +3
Query: 342 LLLDCRSFFAFNAGHIAGSVNVRFSTIVRRRA-KGAMGLEHIVPNAELRGRLLAGA-YHA 515
LL+DCR + + HI ++NV I+ RR KG + + + E R R
Sbjct: 35 LLMDCRPQELYESSHIESAINVAIPGIMLRRLQKGNLPVRALFTRCEDRDRFTRRCGTDT 94
Query: 516 VVLLDERSAAL-ECAKRDGTLALAAGALCREARGAQIFLLKGGYEAFSV--------SCP 668
VVL DE S+ E + L L L E G + F L+GG+ F +
Sbjct: 95 VVLYDENSSDWNENTGGESVLGLLLKKLKDE--GCRAFYLEGGFSKFQAEFALHCETNLD 152
Query: 669 ELCSKQSTPMGL----SLPLSTSVPDSTESGCSSCSTPLYDQGG----------PVEILP 806
CS S P+ + L +S+ ES D G PVEILP
Sbjct: 153 GSCSSSSPPLPVLGLGGLRISSDSSSDIESDLDRDPNSATDSDGSPLSNSQPSFPVEILP 212
Query: 807 FLYLGSAYHASRKDMLDALGITALINVSANCPNHFE--GHYQYKSIPVEDNHKADISSWF 980
FLYLG A ++ D+L+ GI ++NV+ N PN FE G ++YK IP+ D+ ++S +F
Sbjct: 213 FLYLGCAKDSTNLDVLEEFGIKYILNVTPNLPNLFENAGEFKYKQIPISDHWSQNLSQFF 272
Query: 981 NEAIDFIDSIKNAGGRVFVHCQAGISRSATICLAYLMRTNRVKLDEAFEFVKQRRSIISP 1160
EAI FID + V VHC AGISRS T+ +AYLM+ + +++A++ VK ++S ISP
Sbjct: 273 PEAISFIDEARGKNCGVLVHCLAGISRSVTVTVAYLMQKLNLSMNDAYDIVKMKKSNISP 332
Query: 1161 NFSFMGQLLQFESQV-LAPHCSAEAGSPAM 1247
NF+FMGQLL FE + L+ C +P +
Sbjct: 333 NFNFMGQLLDFERTLGLSSPCDNRVPTPQL 362
>ref|NP_032774.1| dual specificity protein phosphatase 8 [Mus musculus].
Length = 663
Score = 159 bits (403), Expect = 6e-39
Identities = 106/305 (34%), Positives = 161/305 (52%), Gaps = 3/305 (0%)
Frame = +3
Query: 291 LDAGGLRTLLRERAAQCLLLDCRSFFAFNAGHIAGSVNVRFSTIVRRRAK-GAMGLEHIV 467
+DA L +LLR L++D RSF +N+ H+ SVN+ S +V+RR + G + + ++
Sbjct: 11 MDAKKLASLLRGGPGGPLVIDSRSFVEYNSCHVLSSVNICCSKLVKRRLQQGKVTIAELI 70
Query: 468 PNAELRGRLLAGAYHAVVLLDERSAALECAKRDGTLALAAGALCREARGAQIFLLKGGYE 647
A R ++ A VV+ D+ + D L++ L + + +L GG+
Sbjct: 71 QPAT-RSQVDATEPQDVVVYDQSTRDASVLAADSFLSILLSKL--DGCFDSVAILTGGFA 127
Query: 648 AFSVSCPELCS-KQSTPMGLSLPLSTSVPDSTESGCSSCSTPLYDQGGPVEILPFLYLGS 824
FS P LC K +T +SL S G ILP LYLGS
Sbjct: 128 TFSSCFPGLCEGKPATLPSMSLSQPCLPVPSV---------------GLTRILPHLYLGS 172
Query: 825 AYHASRKDMLDALGITALINVSANCPN-HFEGHYQYKSIPVEDNHKADISSWFNEAIDFI 1001
KD++ GI+ ++N S +CP F ++ IP+ DN+ + W +++I+FI
Sbjct: 173 QKDVLNKDLMTQNGISYVLNASNSCPKPDFICESRFMRIPINDNYCEKLLPWLDKSIEFI 232
Query: 1002 DSIKNAGGRVFVHCQAGISRSATICLAYLMRTNRVKLDEAFEFVKQRRSIISPNFSFMGQ 1181
D K + +V VHC AGISRSATI +AY+M+T + D+A+ FVK RR ISPNF+F+GQ
Sbjct: 233 DKAKLSSCQVIVHCLAGISRSATIAIAYIMKTMGMSSDDAYRFVKDRRPSISPNFNFLGQ 292
Query: 1182 LLQFE 1196
LL++E
Sbjct: 293 LLEYE 297
>ref|NP_569714.2| dual specificity phosphatase 16 isoform A1 [Mus musculus].
Length = 660
Score = 159 bits (402), Expect = 7e-39
Identities = 101/301 (33%), Positives = 148/301 (49%), Gaps = 1/301 (0%)
Frame = +3
Query: 306 LRTLLRERAAQCLLLDCRSFFAFNAGHIAGSVNVRFSTIVRRRAKGAMGLEHIVPNAELR 485
L LL + LL+D R F +N HI ++N+ S +++RR + L + +
Sbjct: 15 LVALLESGTEKVLLIDSRPFVEYNTSHILEAININCSKLMKRRLQQDKVLITELIQHSAK 74
Query: 486 GRLLAGAYHAVVLLDERSAALECAKRDGTLALAAGALCREARGAQIFLLKGGYEAFSVSC 665
++ VV+ D+ S + D L + G L R + LL GG+ FS
Sbjct: 75 HKVDIDCNQKVVVYDQSSQDVGSLSSDCFLTVLLGKLERSFNS--VHLLAGGFAEFSRCF 132
Query: 666 PELCSKQSTPMGLSLPLSTSVPDSTESGCSSCSTPLYDQGGPVEILPFLYLGSAYHASRK 845
P LC +ST VP C + GP ILP LYLG K
Sbjct: 133 PGLCEGKST----------LVPTCISQPCLPVANI-----GPTRILPNLYLGCQRDVLNK 177
Query: 846 DMLDALGITALINVSANCPN-HFEGHYQYKSIPVEDNHKADISSWFNEAIDFIDSIKNAG 1022
D++ GI ++N S CP F + +PV D+ I W ++++DFI+ K +
Sbjct: 178 DLMQQNGIGYVLNASNTCPKPDFIPESHFLRVPVNDSFCEKILPWLDKSVDFIEKAKASN 237
Query: 1023 GRVFVHCQAGISRSATICLAYLMRTNRVKLDEAFEFVKQRRSIISPNFSFMGQLLQFESQ 1202
G V +HC AGISRSATI +AY+M+ + LDEA+ FVK++R ISPNF+FMGQL+ +E
Sbjct: 238 GCVLIHCLAGISRSATIAIAYIMKRMDMSLDEAYRFVKEKRPTISPNFNFMGQLMDYEKT 297
Query: 1203 V 1205
+
Sbjct: 298 I 298
>ref|NP_071302.2| dual specificity protein phosphatase 10 [Mus musculus].
Length = 483
Score = 153 bits (386), Expect = 5e-37
Identities = 96/298 (32%), Positives = 156/298 (52%), Gaps = 10/298 (3%)
Frame = +3
Query: 342 LLLDCRSFFAFNAGHIAGSVNVRFSTIVRRRA--KGAMGLEHIVPNAELRGRLLAGAYHA 515
+++DCR F +N HI G+V++ + + RR +G + + ++ E +
Sbjct: 174 VIIDCRPFMEYNKSHIQGAVHINCADKISRRRLQQGKITVLDLISCREGKDSFKRIFSKE 233
Query: 516 VVLLDERSAALECAKRDGTLALAAGALCREARGAQIFLLKGGYEAFSVSCPELCSKQSTP 695
+++ DE + L + +L RE G + +LKGG +F + LC
Sbjct: 234 IIVYDENTNEPSRVTPSQPLHIVLESLKRE--GKEPLVLKGGLSSFKQNHGNLCDNSLQL 291
Query: 696 M------GLSLPLSTSVPDSTESGCSSCSTPLYDQGGPVEILPFLYLGSAYHASRKDMLD 857
G + S+ +P S + TP + ILPFL+LG+ A D +
Sbjct: 292 QECREVGGGASAASSMLPQSVPT------TPDIENAELTPILPFLFLGNEQDAQDLDTMQ 345
Query: 858 ALGITALINVSANCP-NHFE-GHYQYKSIPVEDNHKADISSWFNEAIDFIDSIKNAGGRV 1031
L I +INV+ + P H+E G + YK +P D++K ++ +F EA +FI+ G +
Sbjct: 346 RLNIGYVINVTTHLPLYHYEKGLFNYKRLPATDSNKQNLRQYFEEAFEFIEEAHQCGKGL 405
Query: 1032 FVHCQAGISRSATICLAYLMRTNRVKLDEAFEFVKQRRSIISPNFSFMGQLLQFESQV 1205
+HCQAG+SRSATI +AYLM+ R+ + +A++FVK +R IISPN +FMGQLL+FE +
Sbjct: 406 LIHCQAGVSRSATIVIAYLMKHTRMTMTDAYKFVKGKRPIISPNLNFMGQLLEFEEDL 463
>ref|NP_083628.3| dual specificity protein phosphatase 9 [Mus musculus].
Length = 452
Score = 142 bits (358), Expect = 9e-34
Identities = 93/246 (37%), Positives = 130/246 (52%), Gaps = 32/246 (13%)
Frame = +3
Query: 555 AKRDGTLALAAGALCREAR--GAQIFLLKGGYEAFSVSCPELCSKQ-STPMGLSL-PLST 722
AK + G L ++ R G + L+GG+ F CP LC S G L +S+
Sbjct: 164 AKEEWDADSVLGVLLQKLREEGYPAYYLQGGFSKFQAECPHLCETSFSGRAGSGLGSMSS 223
Query: 723 SVP----------------------DSTESGCSSCSTPLYDQG----GPVEILPFLYLGS 824
VP D+ G S +T G PV+ILP LYLGS
Sbjct: 224 PVPVVGLGGLCLSSDFSDAESEADRDTLSCGLDSENTTSPPAGLLPPFPVQILPNLYLGS 283
Query: 825 AYHASRKDMLDALGITALINVSANCPNHFE--GHYQYKSIPVEDNHKADISSWFNEAIDF 998
A ++ + L LGI ++NV+ N PN FE G + YK IP+ D+ ++S +F EAI F
Sbjct: 284 ARDSANLESLAKLGIRYILNVTPNLPNLFEKNGDFHYKQIPISDHWSQNLSQFFPEAIAF 343
Query: 999 IDSIKNAGGRVFVHCQAGISRSATICLAYLMRTNRVKLDEAFEFVKQRRSIISPNFSFMG 1178
ID + V VHC AG+SRS T+ +AYLM+ + L++A++ VK+++S ISPNF+FMG
Sbjct: 344 IDEALSQNCGVLVHCLAGVSRSVTVTVAYLMQKLHLSLNDAYDLVKRKKSNISPNFNFMG 403
Query: 1179 QLLQFE 1196
QLL FE
Sbjct: 404 QLLDFE 409
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 61,888,650
Number of extensions: 1664072
Number of successful extensions: 7208
Number of sequences better than 1.0e-05: 33
Number of HSP's gapped: 7141
Number of HSP's successfully gapped: 33
Length of query: 654
Length of database: 15,617,559
Length adjustment: 108
Effective length of query: 546
Effective length of database: 12,373,671
Effective search space: 6756024366
Effective search space used: 6756024366
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-001005
(1963 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_003134093.1| PREDICTED: dual specificity protein phosphat... 732 0.0
Alignment gi|XP_003133440.1| PREDICTED: dual specificity protein phosphat... 459 e-129
Alignment gi|XP_003359414.1| PREDICTED: dual specificity protein phosphat... 296 3e-80
Alignment gi|XP_003354745.1| PREDICTED: dual specificity protein phosphat... 263 3e-70
Alignment gi|XP_003132295.2| PREDICTED: LOW QUALITY PROTEIN: dual specifi... 179 5e-45
Alignment gi|XP_003135519.2| PREDICTED: LOW QUALITY PROTEIN: dual specifi... 162 6e-40
Alignment gi|XP_003130558.1| PREDICTED: dual specificity protein phosphat... 155 8e-38
Alignment gi|XP_003361585.1| PREDICTED: dual specificity protein phosphat... 128 1e-29
Alignment gi|XP_003357676.1| PREDICTED: dual specificity protein phosphat... 114 3e-25
Alignment gi|XP_001929364.1| PREDICTED: protein phosphatase Slingshot hom... 103 5e-22
>ref|XP_003134093.1| PREDICTED: dual specificity protein phosphatase 1 [Sus scrofa].
Length = 367
Score = 732 bits (1890), Expect = 0.0
Identities = 367/367 (100%), Positives = 367/367 (100%)
Frame = +3
Query: 270 MVMEVGSLDAGGLRTLLRERAAQCLLLDCRSFFAFNAGHIAGSVNVRFSTIVRRRAKGAM 449
MVMEVGSLDAGGLRTLLRERAAQCLLLDCRSFFAFNAGHIAGSVNVRFSTIVRRRAKGAM
Sbjct: 1 MVMEVGSLDAGGLRTLLRERAAQCLLLDCRSFFAFNAGHIAGSVNVRFSTIVRRRAKGAM 60
Query: 450 GLEHIVPNAELRGRLLAGAYHAVVLLDERSAALECAKRDGTLALAAGALCREARGAQIFL 629
GLEHIVPNAELRGRLLAGAYHAVVLLDERSAALECAKRDGTLALAAGALCREARGAQIFL
Sbjct: 61 GLEHIVPNAELRGRLLAGAYHAVVLLDERSAALECAKRDGTLALAAGALCREARGAQIFL 120
Query: 630 LKGGYEAFSVSCPELCSKQSTPMGLSLPLSTSVPDSTESGCSSCSTPLYDQGGPVEILPF 809
LKGGYEAFSVSCPELCSKQSTPMGLSLPLSTSVPDSTESGCSSCSTPLYDQGGPVEILPF
Sbjct: 121 LKGGYEAFSVSCPELCSKQSTPMGLSLPLSTSVPDSTESGCSSCSTPLYDQGGPVEILPF 180
Query: 810 LYLGSAYHASRKDMLDALGITALINVSANCPNHFEGHYQYKSIPVEDNHKADISSWFNEA 989
LYLGSAYHASRKDMLDALGITALINVSANCPNHFEGHYQYKSIPVEDNHKADISSWFNEA
Sbjct: 181 LYLGSAYHASRKDMLDALGITALINVSANCPNHFEGHYQYKSIPVEDNHKADISSWFNEA 240
Query: 990 IDFIDSIKNAGGRVFVHCQAGISRSATICLAYLMRTNRVKLDEAFEFVKQRRSIISPNFS 1169
IDFIDSIKNAGGRVFVHCQAGISRSATICLAYLMRTNRVKLDEAFEFVKQRRSIISPNFS
Sbjct: 241 IDFIDSIKNAGGRVFVHCQAGISRSATICLAYLMRTNRVKLDEAFEFVKQRRSIISPNFS 300
Query: 1170 FMGQLLQFESQVLAPHCSAEAGSPAMAVLDRGASTTTVFNFPVSIPVHPTNSALSYLQSP 1349
FMGQLLQFESQVLAPHCSAEAGSPAMAVLDRGASTTTVFNFPVSIPVHPTNSALSYLQSP
Sbjct: 301 FMGQLLQFESQVLAPHCSAEAGSPAMAVLDRGASTTTVFNFPVSIPVHPTNSALSYLQSP 360
Query: 1350 ITTSPSC 1370
ITTSPSC
Sbjct: 361 ITTSPSC 367
>ref|XP_003133440.1| PREDICTED: dual specificity protein phosphatase 4-like [Sus scrofa].
Length = 394
Score = 459 bits (1181), Expect = e-129
Identities = 236/368 (64%), Positives = 278/368 (75%), Gaps = 6/368 (1%)
Frame = +3
Query: 285 GSLDAGGLRTLLRERAAQCLLLDCRSFFAFNAGHIAGSVNVRFSTIVRRRAKGAMGLEHI 464
G+ +G L ++CLLLDCR F A +AG+I GSVNVR +TIVRRRAKG++ LE I
Sbjct: 27 GAAGSGSHGALGLLSGSKCLLLDCRPFLAHSAGYIRGSVNVRCNTIVRRRAKGSVSLEQI 86
Query: 465 VP-NAELRGRLLAGAYHAVVLLDERSAALECAKRDGTLALAAGALCREARGAQIFLLKGG 641
+P E+R RL +G Y AV++ DERS E + D T++L AL R A I LLKGG
Sbjct: 87 LPAEEEVRARLRSGLYSAVIVYDERSPRAESLREDSTVSLVVQALRRNAERTDICLLKGG 146
Query: 642 YEAFSVSCPELCSKQSTPMGLSLPLSTSVPDSTESGCSSCSTPLYDQGGPVEILPFLYLG 821
YE FS PE CSK + + S +S + GCSSC+TPL+DQGGPVEILPFLYLG
Sbjct: 147 YERFSSEYPEFCSKTKALAAIPPAVPPSAGESLDLGCSSCATPLHDQGGPVEILPFLYLG 206
Query: 822 SAYHASRKDMLDALGITALINVSANCPNHFEGHYQYKSIPVEDNHKADISSWFNEAIDFI 1001
SAYHA+R+DMLDALGITAL+NVS++CPNHFEGHYQYK IPVEDNHKADISSWF EAI++I
Sbjct: 207 SAYHAARRDMLDALGITALLNVSSDCPNHFEGHYQYKCIPVEDNHKADISSWFMEAIEYI 266
Query: 1002 DSIKNAGGRVFVHCQAGISRSATICLAYLMRTNRVKLDEAFEFVKQRRSIISPNFSFMGQ 1181
D++K GRV VHCQAGISRSATICLAYLM RV+L+EAFEFVKQRRSIISPNFSFMGQ
Sbjct: 267 DAVKECRGRVLVHCQAGISRSATICLAYLMMKKRVRLEEAFEFVKQRRSIISPNFSFMGQ 326
Query: 1182 LLQFESQVLAPHCSAEAGSPAMAVLDRGASTTT-----VFNFPVSIPVHPTNSALSYLQS 1346
LLQFESQVLA C+ EA SP+ + +RG +T T VF+FPVS+ VHPT S+L YL S
Sbjct: 327 LLQFESQVLATSCAVEAASPSGPLRERGKATPTPTSQFVFSFPVSVGVHPTPSSLPYLHS 386
Query: 1347 PITTSPSC 1370
PITTSPSC
Sbjct: 387 PITTSPSC 394
>ref|XP_003359414.1| PREDICTED: dual specificity protein phosphatase 5 [Sus scrofa].
Length = 384
Score = 296 bits (758), Expect = 3e-80
Identities = 178/394 (45%), Positives = 239/394 (60%), Gaps = 29/394 (7%)
Frame = +3
Query: 276 MEVGSLDAGGLRTLLR-ERAAQCLLLDCRSFFAFNAGHIAGSVNVRFSTIVRRRAKG-AM 449
M+V SLD LR +LR E AA+C++LDCR + AF A + GS+NV +++V RRA+G A+
Sbjct: 1 MKVTSLDGRQLRKMLRKEAAARCVVLDCRPYLAFAASSVRGSLNVNLNSVVLRRARGGAV 60
Query: 450 GLEHIVPNAELRGRLL---AGAYHAVVLLDERSAALECAKRDGTLALAAGAL--CREARG 614
+++P+ R RLL G AVV+LD+ S + + + + +L C A G
Sbjct: 61 SARYVLPDEAARARLLQEGGGGVAAVVVLDQGSRHWQKLREESAARVVLTSLLACLPA-G 119
Query: 615 AQIFLLKGGYEAFSVSCPELCSKQSTPMGLSLPLSTSVPDSTESGCSSCSTPL------- 773
+++ LKGGYE F PE C P+S ++ + S C P+
Sbjct: 120 PRVYFLKGGYETFYSEYPECCVDVK-------PISQEKVETERALISQCGKPVLNISFRP 172
Query: 774 -YDQGGPVEILPFLYLGSAYHASRKDMLDALGITALINVSANCPNHFEGHYQYKSIPVED 950
YDQGGPVEILPFLYLGSAYHAS+ + L L ITAL+NVS H YK IPVED
Sbjct: 173 AYDQGGPVEILPFLYLGSAYHASKCEFLANLHITALLNVSRRTSEACTTHLHYKWIPVED 232
Query: 951 NHKADISSWFNEAIDFIDSIKNAGGRVFVHCQAGISRSATICLAYLMRTNRVKLDEAFEF 1130
+H ADISS F EAIDFID ++ GG+V VHC+AGISRS TIC+AYLM+T ++ L +AF++
Sbjct: 233 SHTADISSHFQEAIDFIDCVREKGGKVLVHCEAGISRSPTICMAYLMKTKQLHLKDAFDY 292
Query: 1131 VKQRRSIISPNFSFMGQLLQFESQVL-------APHCSAEAGSPA-MAVLD------RGA 1268
+KQRRS+ISPNF FMGQLLQ+ES++L AP C EA P+ +A L +G+
Sbjct: 293 IKQRRSVISPNFGFMGQLLQYESEILPSTPTPQAPSCQGEAAGPSFLAHLQTLSPDVQGS 352
Query: 1269 STTTVFNFPVSIPVHPTNSALSYLQSPITTSPSC 1370
T + +P H T S LS +SP+ T+ SC
Sbjct: 353 YCTFPTSVLAPVPTHSTVSELS--RSPMATATSC 384
>ref|XP_003354745.1| PREDICTED: dual specificity protein phosphatase 2-like [Sus scrofa].
Length = 234
Score = 263 bits (671), Expect = 3e-70
Identities = 136/241 (56%), Positives = 167/241 (69%), Gaps = 2/241 (0%)
Frame = +3
Query: 492 LLAGAYHAVVLLDERSAALECAKRDGTLALAAGALCREARGAQ--IFLLKGGYEAFSVSC 665
+L + V+LDE SA++ DG AL E R ++ L GG++ F C
Sbjct: 3 VLRKCWRGPVVLDEGSASVAELPPDGPAHALLAALLHETRAGPTLVYFLPGGFDGFQACC 62
Query: 666 PELCSKQSTPMGLSLPLSTSVPDSTESGCSSCSTPLYDQGGPVEILPFLYLGSAYHASRK 845
P+LCS+ S ++P E+ PLYDQGGPVEILP+L+LGS H+S
Sbjct: 63 PDLCSE-----------SPALPMLPENSRPDPRAPLYDQGGPVEILPYLFLGSCSHSSDL 111
Query: 846 DMLDALGITALINVSANCPNHFEGHYQYKSIPVEDNHKADISSWFNEAIDFIDSIKNAGG 1025
L A GITA++NVSA+CPNHFEG +YKSIPVEDN +IS+WF EAI FIDS+KN+GG
Sbjct: 112 QGLQACGITAVLNVSASCPNHFEGLLRYKSIPVEDNQMVEISAWFQEAIGFIDSVKNSGG 171
Query: 1026 RVFVHCQAGISRSATICLAYLMRTNRVKLDEAFEFVKQRRSIISPNFSFMGQLLQFESQV 1205
RV VHCQAGISRSATICLAYL++ RV+LDEAF+FVKQRR +ISPNFSFMGQLLQFE+QV
Sbjct: 172 RVLVHCQAGISRSATICLAYLIQNRRVRLDEAFDFVKQRRGVISPNFSFMGQLLQFETQV 231
Query: 1206 L 1208
L
Sbjct: 232 L 232
>ref|XP_003132295.2| PREDICTED: LOW QUALITY PROTEIN: dual specificity protein phosphatase
7-like [Sus scrofa].
Length = 419
Score = 179 bits (454), Expect = 5e-45
Identities = 115/314 (36%), Positives = 165/314 (52%), Gaps = 26/314 (8%)
Frame = +3
Query: 333 AQCLLLDCRSFFAFNAGHIAGSVNVRF-STIVRRRAKGAMGLEHIVPNAELRGRLLAGAY 509
A LLLDCR F + HI ++N+ ++RR KG + + I+PN + R
Sbjct: 70 ASLLLLDCRPHELFESSHIETAINLAIPGLMLRRLRKGNLPIRSIIPNHADKERFATRCK 129
Query: 510 HAVVLLDERSAALECAKRDGTLALAAGALCREAR--GAQIFLLKGGYEAFSVSCPELCS- 680
A VLL + + A E G A G L ++ R G Q + L+GG+ F E C
Sbjct: 130 AATVLLYDEATA-EWQPEPGAPASVLGLLLQKLRDDGCQAYYLQGGFNKFQTEYSEHCET 188
Query: 681 ---KQSTPMGL---------SLPLSTSVPD--------STESGCSSCSTPLYDQGGPVEI 800
S+P G L +S+ D S+ + P PV+I
Sbjct: 189 NVDSSSSPSGSPPTSVLGLGGLRISSDCSDXESERELPSSATESDGSPVPSSQPAFPVQI 248
Query: 801 LPFLYLGSAYHASRKDMLDALGITALINVSANCPNHFE--GHYQYKSIPVEDNHKADISS 974
LP+LYLG A ++ D+L GI ++NV+ N PN FE G + YK IP+ D+ ++S
Sbjct: 249 LPYLYLGCAKDSTNLDVLGKYGIKYILNVTPNLPNAFEHGGEFTYKQIPISDHWSQNLSQ 308
Query: 975 WFNEAIDFIDSIKNAGGRVFVHCQAGISRSATICLAYLMRTNRVKLDEAFEFVKQRRSII 1154
+F EAI FID ++ V VHC AGISRS T+ +AYLM+ + L++A++FVK+++S I
Sbjct: 309 FFPEAISFIDEARSKKCGVLVHCLAGISRSVTVTVAYLMQKMNLSLNDAYDFVKRKKSNI 368
Query: 1155 SPNFSFMGQLLQFE 1196
SPNF+FMGQLL FE
Sbjct: 369 SPNFNFMGQLLDFE 382
>ref|XP_003135519.2| PREDICTED: LOW QUALITY PROTEIN: dual specificity protein phosphatase
9-like [Sus scrofa].
Length = 382
Score = 162 bits (410), Expect = 6e-40
Identities = 115/335 (34%), Positives = 168/335 (50%), Gaps = 38/335 (11%)
Frame = +3
Query: 306 LRTLLRERAAQCLLLDCRSFFAFNAGHIAGSVNVRF-STIVRRRAKGAMGLEHIVPNAEL 482
LR L + LLLDCRS + + I G+++V + ++RR +G++ + ++P L
Sbjct: 11 LRRELSPPRPRLLLLDCRSRELYESARIGGALSVALPALLLRRLRRGSLSVRSLLPGPPL 70
Query: 483 RGRLLAGAYHAVVLLDE-----RSAALECAKRDGTLALAAGALCREAR--GAQIFLLKGG 641
+ A V+L D+ R E + G L ++ R G + L+GG
Sbjct: 71 QPPPPA----PVLLYDQGGGRHRRGEAEAEAEEWEAESVLGTLLQKLREEGYLAYYLQGG 126
Query: 642 YEAFSVSCPELCSKQSTPMGLSLPLSTSVPDSTE--------SGCS---------SCSTP 770
+ F CP LC G P + VP S CS S S
Sbjct: 127 FSRFQAECPHLCETSLNSRGG--PSAAPVPSPVVGLGGLCLGSDCSDGESEPDRDSMSCG 184
Query: 771 LYDQGG-----------PVEILPFLYLGSAYHASRKDMLDALGITALINVSANCPNHFE- 914
L +G PV+ILP LYLGSA ++ + L LGI ++NV+ N PN FE
Sbjct: 185 LDSEGATPPPAGCXPSFPVQILPNLYLGSARDSANVESLAKLGIRYILNVTPNLPNLFEK 244
Query: 915 -GHYQYKSIPVEDNHKADISSWFNEAIDFIDSIKNAGGRVFVHCQAGISRSATICLAYLM 1091
G + YK IP+ D+ ++S +F EAI FID + V VHC AG+SRS T+ +AYLM
Sbjct: 245 NGDFHYKQIPISDHWSQNLSQFFPEAIAFIDEALSQNCGVLVHCLAGVSRSVTVTVAYLM 304
Query: 1092 RTNRVKLDEAFEFVKQRRSIISPNFSFMGQLLQFE 1196
+ + L++A++ VK+++S ISPNF+FMGQLL FE
Sbjct: 305 QKLHLSLNDAYDLVKRKKSNISPNFNFMGQLLDFE 339
>ref|XP_003130558.1| PREDICTED: dual specificity protein phosphatase 10 isoform 1 [Sus
scrofa].
Length = 482
Score = 155 bits (392), Expect = 8e-38
Identities = 97/297 (32%), Positives = 155/297 (52%), Gaps = 9/297 (3%)
Frame = +3
Query: 342 LLLDCRSFFAFNAGHIAGSVNVRFSTIVRRRA--KGAMGLEHIVPNAELRGRLLAGAYHA 515
+++DCR F +N HI G+V++ + + RR +G + + ++ E +
Sbjct: 173 VIIDCRPFMEYNKSHIQGAVHINCADKISRRRLQQGKITVLDLISCREGKDSFKRIFSKE 232
Query: 516 VVLLDERSAALECAKRDGTLALAAGALCREARGAQIFLLKGGYEAFSVSCPELCSKQSTP 695
+++ DE + L + +L RE G + +LKGG +F + LC
Sbjct: 233 IIVYDENTNEPSRVMPSQPLHIVLESLKRE--GKEPLVLKGGLSSFKQNHENLCDNS--- 287
Query: 696 MGLSLPLSTSVPDSTESGCSSC-----STPLYDQGGPVEILPFLYLGSAYHASRKDMLDA 860
L L V + + STP + ILPFL+LG+ A DM+
Sbjct: 288 --LQLQECREVGGGASAASNPLPQPAPSTPDIENAELTPILPFLFLGNEQDAQDLDMMQR 345
Query: 861 LGITALINVSANCP-NHFE-GHYQYKSIPVEDNHKADISSWFNEAIDFIDSIKNAGGRVF 1034
L I +INV+ + P H+E G + YK +P D++K ++ +F EA +FI+ G +
Sbjct: 346 LNIGYVINVTTHLPLYHYEKGLFNYKRLPATDSNKQNLRQYFEEAFEFIEEAHQCGKGLL 405
Query: 1035 VHCQAGISRSATICLAYLMRTNRVKLDEAFEFVKQRRSIISPNFSFMGQLLQFESQV 1205
+HCQAG+SRSATI +AYLM+ R+ + +A++FVK +R IISPN +FMGQLL+FE +
Sbjct: 406 IHCQAGVSRSATIVIAYLMKHTRMTMTDAYKFVKGKRPIISPNLNFMGQLLEFEEDL 462
>ref|XP_003361585.1| PREDICTED: dual specificity protein phosphatase 6-like [Sus scrofa].
Length = 366
Score = 128 bits (322), Expect = 1e-29
Identities = 63/132 (47%), Positives = 90/132 (68%), Gaps = 2/132 (1%)
Frame = +3
Query: 807 FLYLGSAYHASRKDMLDALGITALINVSANCPNHFE--GHYQYKSIPVEDNHKADISSWF 980
FLYLG A ++ D+L+ GI ++NV+ N PN FE G ++YK IP+ D+ ++S +F
Sbjct: 198 FLYLGCAKDSTNLDVLEEFGIKYILNVTPNLPNLFENAGEFKYKQIPISDHWSQNLSQFF 257
Query: 981 NEAIDFIDSIKNAGGRVFVHCQAGISRSATICLAYLMRTNRVKLDEAFEFVKQRRSIISP 1160
EAI FID + V VHC AGISRS T+ +AYLM+ + +++A++ VK ++S ISP
Sbjct: 258 PEAISFIDEARGKNCGVLVHCLAGISRSVTVTVAYLMQKLNLSMNDAYDIVKMKKSNISP 317
Query: 1161 NFSFMGQLLQFE 1196
NF+FMGQLL FE
Sbjct: 318 NFNFMGQLLDFE 329
>ref|XP_003357676.1| PREDICTED: dual specificity protein phosphatase 10 isoform 2 [Sus
scrofa].
Length = 141
Score = 114 bits (284), Expect = 3e-25
Identities = 55/121 (45%), Positives = 83/121 (68%), Gaps = 2/121 (1%)
Frame = +3
Query: 849 MLDALGITALINVSANCP-NHFE-GHYQYKSIPVEDNHKADISSWFNEAIDFIDSIKNAG 1022
M+ L I +INV+ + P H+E G + YK +P D++K ++ +F EA +FI+ G
Sbjct: 1 MMQRLNIGYVINVTTHLPLYHYEKGLFNYKRLPATDSNKQNLRQYFEEAFEFIEEAHQCG 60
Query: 1023 GRVFVHCQAGISRSATICLAYLMRTNRVKLDEAFEFVKQRRSIISPNFSFMGQLLQFESQ 1202
+ +HCQAG+SRSATI +AYLM+ R+ + +A++FVK +R IISPN +FMGQLL+FE
Sbjct: 61 KGLLIHCQAGVSRSATIVIAYLMKHTRMTMTDAYKFVKGKRPIISPNLNFMGQLLEFEED 120
Query: 1203 V 1205
+
Sbjct: 121 L 121
>ref|XP_001929364.1| PREDICTED: protein phosphatase Slingshot homolog 1 [Sus scrofa].
Length = 1048
Score = 103 bits (256), Expect = 5e-22
Identities = 65/194 (33%), Positives = 95/194 (48%)
Frame = +3
Query: 789 PVEILPFLYLGSAYHASRKDMLDALGITALINVSANCPNHFEGHYQYKSIPVEDNHKADI 968
P I LYLGS ++AS + L G+ ++NV+ N F G + Y +I V D D+
Sbjct: 309 PSLIFDHLYLGSEWNASNLEELQGSGVDYILNVTREIDNFFPGLFAYHNIRVYDEETTDL 368
Query: 969 SSWFNEAIDFIDSIKNAGGRVFVHCQAGISRSATICLAYLMRTNRVKLDEAFEFVKQRRS 1148
+ +NEA FI+ K + VHC+ G+SRSA+ +AY M+ L++A+ +VKQ+RS
Sbjct: 369 LAHWNEAYHFINKAKRNHSKCLVHCKMGVSRSASTVIAYAMKEFGWPLEKAYNYVKQKRS 428
Query: 1149 IISPNFSFMGQLLQFESQVLAPHCSAEAGSPAMAVLDRGASTTTVFNFPVSIPVHPTNSA 1328
I PN FM QL ++E + +A L R T + PV P P +
Sbjct: 429 ITRPNAGFMKQLSEYEGIL-------DASKQRHNKLWR-QQTDSCLQQPVDDPAAPEDFL 480
Query: 1329 LSYLQSPITTSPSC 1370
L S P C
Sbjct: 481 PETLDSTPEAQPPC 494
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 46,186,794
Number of extensions: 1269348
Number of successful extensions: 5606
Number of sequences better than 1.0e-05: 32
Number of HSP's gapped: 5572
Number of HSP's successfully gapped: 32
Length of query: 654
Length of database: 11,343,932
Length adjustment: 105
Effective length of query: 549
Effective length of database: 8,729,747
Effective search space: 4792631103
Effective search space used: 4792631103
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-001005
(1963 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr16 1768 0.0
Sscrofa_Chr15 147 3e-32
Sscrofa_Chr03 78 2e-11
Sscrofa_Chr14 74 3e-10
gb|GL894700.2| Sus scrofa unplaced genomic scaffold ChrUScaf2584 66 8e-08
>Sscrofa_Chr16
|| Length = 86898991
Score = 1768 bits (892), Expect = 0.0
Identities = 943/960 (98%), Gaps = 3/960 (0%)
Strand = Plus / Plus
Query: 1005 tccatcaagaatgccggcggaagggtgtttgtccactgccaggcgggcatttcccgatcg 1064
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55770464 tccatcaagaatgccggcggaagggtgtttgtccactgccaggcgggcatttcccgatcg 55770523
Query: 1065 gccaccatctgcctcgcttacctcatgaggactaaccgagtcaagctggacgaggccttt 1124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55770524 gccaccatctgcctcgcttacctcatgaggactaaccgagtcaagctggacgaggccttt 55770583
Query: 1125 gagtttgtgaagcagaggaggagcatcatctcccccaacttcagcttcatgggccagctg 1184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55770584 gagtttgtgaagcagaggaggagcatcatctcccccaacttcagcttcatgggccagctg 55770643
Query: 1185 ctgcagtttgagtcccaggtcctggccccgcactgctcggcggaggctgggagcccggcc 1244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55770644 ctgcagtttgagtcccaggtcctggccccgcactgctcggcggaggctgggagcccggcc 55770703
Query: 1245 atggccgtgctggaccgaggcgcctccaccaccaccgtcttcaacttccccgtctccatc 1304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55770704 atggccgtgctggaccgaggcgcctccaccaccaccgtcttcaacttccccgtctccatc 55770763
Query: 1305 cccgtccaccccacgaacagtgcgttgagctaccttcagagccccatcacgacctctccc 1364
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55770764 cccgttcaccccacgaacagtgcgttgagctaccttcagagccccatcacgacctctccc 55770823
Query: 1365 agctgctgaaaggccacgggaggtgatcttcacaacccaccgggactccaggctccttct 1424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55770824 agctgctgaaaggccacgggaggtgatcttcacaacccaccgggactccaggctccttct 55770883
Query: 1425 tgcaaggagacatgcaataactccaaggaagggggctcgcgagggctggtccttccttat 1484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55770884 tgcaaggagacatgcaataactccaaggaagggggctcgcgagggctggtccttccttat 55770943
Query: 1485 ttaatttcatccgaattccactgggttcctgggcggtcctggggatgacttggcgccaag 1544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55770944 ttaatttcatccgaattccactgggttcctgggcggtcctggggatgacttggcgccaag 55771003
Query: 1545 accgtctgctgaactcagcacattggggaccaacatgccgtgcgtgggtgcatcaagtct 1604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55771004 accgtctgctgaactcagcacattggggaccaacatgccgtgcgtgggtgcatcaagtct 55771063
Query: 1605 ctgacaaaaggggcagaagagagaggactcggtgtgcgagccgannnnnnnctgctgggc 1664
|||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 55771064 ctgacaaaaggggcagaagagagaggactcggtgtgcgagccgatttttttctgctgggc 55771123
Query: 1665 cctgtttcctgaagaaacttcatgcttgacatacctaccagtgttaccattcccaatgac 1724
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55771124 cctgtttcctgaagaaacttcatgcttgacatacctaccagtgttaccattcccaatgac 55771183
Query: 1725 acatacgtatgagactggacttgattttatttatttttgtgtcggtgatccgccttcaca 1784
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55771184 acatacgtatgagactggacttgattttatttatttttgtgtcggtgatccgccttcaca 55771243
Query: 1785 gttgtcagcgtctactcctagaagaaccatatacctcaatttttgtgtttgagtactgta 1844
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55771244 gttgtcagcgtctactcctagaagaaccatatacctcaatttttgtgtttgagtactgta 55771303
Query: 1845 acctcttgtaaatagatcctgagcaggtttgttttcagcactgatgg-aagcagcagtgt 1903
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 55771304 acctcttgtaaatagatcctgagcaggtttgttttcagcactgatggaaagcagcagtgt 55771363
Query: 1904 tggggttttgtttggttttttagtttgcaacaagtgtatgtttgctgattatttatgacc 1963
|||| |||||||| ||||| |||| ||||| ||||||||||||||||||||||||||
Sbjct: 55771364 tggg--tttgtttgttttttaagttgccaacagttgtatgtttgctgattatttatgacc 55771421
Score = 1263 bits (637), Expect = 0.0
Identities = 637/637 (100%)
Strand = Plus / Plus
Query: 1 taagcgcgcttcccgcgggtctgactcgccgtgaaggacgttggggttgtaggttctacg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55768410 taagcgcgcttcccgcgggtctgactcgccgtgaaggacgttggggttgtaggttctacg 55768469
Query: 61 cgggttggaggggcaggcaggggagcagtaaggaacccgaggcggtcgagagacccgcac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55768470 cgggttggaggggcaggcaggggagcagtaaggaacccgaggcggtcgagagacccgcac 55768529
Query: 121 gaagacccttcgctcagcccagaggcagtttggagtttggcttaaagaaaacgagggtca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55768530 gaagacccttcgctcagcccagaggcagtttggagtttggcttaaagaaaacgagggtca 55768589
Query: 181 ggcttttcctcgaaagccgtcgccctccccttggcttccgaggacaaagagcacaagaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55768590 ggcttttcctcgaaagccgtcgccctccccttggcttccgaggacaaagagcacaagaag 55768649
Query: 241 acttcacgctgggggcgctggggccggccatggtcatggaagtgggatccctggacgccg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55768650 acttcacgctgggggcgctggggccggccatggtcatggaagtgggatccctggacgccg 55768709
Query: 301 gaggcctgaggacgctgctgcgggagcgcgcggcgcagtgtctgctgttggactgtcgct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55768710 gaggcctgaggacgctgctgcgggagcgcgcggcgcagtgtctgctgttggactgtcgct 55768769
Query: 361 ccttcttcgctttcaacgccggccacatcgccggctccgtcaacgtgcgcttcagtacca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55768770 ccttcttcgctttcaacgccggccacatcgccggctccgtcaacgtgcgcttcagtacca 55768829
Query: 421 tcgtgcggcgccgggccaagggcgccatgggcctggagcacatcgtgcccaacgcggagc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55768830 tcgtgcggcgccgggccaagggcgccatgggcctggagcacatcgtgcccaacgcggagc 55768889
Query: 481 tgcgcggccgcctgctggccggcgcctaccacgccgtggtgctgctggacgagcgcagcg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55768890 tgcgcggccgcctgctggccggcgcctaccacgccgtggtgctgctggacgagcgcagcg 55768949
Query: 541 ctgccttggagtgcgccaaacgcgacggcaccctggctctggccgccggagcgctctgcc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55768950 ctgccttggagtgcgccaaacgcgacggcaccctggctctggccgccggagcgctctgcc 55769009
Query: 601 gcgaggcgcgcggcgcgcaaatcttcttgctcaaagg 637
|||||||||||||||||||||||||||||||||||||
Sbjct: 55769010 gcgaggcgcgcggcgcgcaaatcttcttgctcaaagg 55769046
Score = 444 bits (224), Expect = e-122
Identities = 224/224 (100%)
Strand = Plus / Plus
Query: 779 tcagggtggcccagtggagatcctgccctttctctacctggggagtgcctaccatgcttc 838
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55769805 tcagggtggcccagtggagatcctgccctttctctacctggggagtgcctaccatgcttc 55769864
Query: 839 tcgcaaggacatgctggatgccttgggtatcactgccttgatcaacgtctcggccaactg 898
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55769865 tcgcaaggacatgctggatgccttgggtatcactgccttgatcaacgtctcggccaactg 55769924
Query: 899 tcccaaccattttgagggtcactaccagtacaagagcatccccgttgaggacaaccacaa 958
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55769925 tcccaaccattttgagggtcactaccagtacaagagcatccccgttgaggacaaccacaa 55769984
Query: 959 ggcggacatcagctcctggttcaatgaggcaatcgatttcatcg 1002
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55769985 ggcggacatcagctcctggttcaatgaggcaatcgatttcatcg 55770028
Score = 295 bits (149), Expect = 5e-77
Identities = 149/149 (100%)
Strand = Plus / Plus
Query: 635 aggaggatatgaagctttttctgtttcctgcccggagctctgcagcaaacagtcgacccc 694
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55769320 aggaggatatgaagctttttctgtttcctgcccggagctctgcagcaaacagtcgacccc 55769379
Query: 695 catggggctcagccttcccctgagtactagcgtccctgacagcaccgaatcagggtgcag 754
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55769380 catggggctcagccttcccctgagtactagcgtccctgacagcaccgaatcagggtgcag 55769439
Query: 755 ttcttgcagcactccactctacgatcagg 783
|||||||||||||||||||||||||||||
Sbjct: 55769440 ttcttgcagcactccactctacgatcagg 55769468
>Sscrofa_Chr15
|| Length = 157681621
Score = 147 bits (74), Expect = 3e-32
Identities = 149/174 (85%)
Strand = Plus / Plus
Query: 1038 cactgccaggcgggcatttcccgatcggccaccatctgcctcgcttacctcatgaggact 1097
||||||||||| ||||| ||||| || |||||||||||||| || ||||| |||| ||
Sbjct: 62919353 cactgccaggctggcatctcccgctcagccaccatctgcctggcctacctgatgatgaag 62919412
Query: 1098 aaccgagtcaagctggacgaggcctttgagtttgtgaagcagaggaggagcatcatctcc 1157
|| || || | |||||| |||||||||||||| || |||||| || |||||||||||||
Sbjct: 62919413 aagcgcgtgaggctggaggaggcctttgagttcgtcaagcagcggcggagcatcatctcg 62919472
Query: 1158 cccaacttcagcttcatgggccagctgctgcagtttgagtcccaggtcctggcc 1211
|||||||||||||||||||| |||||||||||||| || || ||||| ||||||
Sbjct: 62919473 cccaacttcagcttcatggggcagctgctgcagttcgaatcacaggtgctggcc 62919526
Score = 133 bits (67), Expect = 4e-28
Identities = 169/203 (83%)
Strand = Plus / Plus
Query: 792 gtggagatcctgccctttctctacctggggagtgcctaccatgcttctcgcaaggacatg 851
||||||||||| ||||| |||||||| || || ||||| || || | || | ||||||
Sbjct: 62918495 gtggagatccttcccttcctctacctcggcagcgcctatcacgcggcccggagagacatg 62918554
Query: 852 ctggatgccttgggtatcactgccttgatcaacgtctcggccaactgtcccaaccatttt 911
||||||||| |||| ||||| |||||| | ||||| || || |||| || ||||| |||
Sbjct: 62918555 ctggatgccctggggatcacagccttgttgaacgtgtcctccgactgcccgaaccacttt 62918614
Query: 912 gagggtcactaccagtacaagagcatccccgttgaggacaaccacaaggcggacatcagc 971
|| || ||||| ||||||||| |||||||||| ||||||||||||||||| |||||||||
Sbjct: 62918615 gaaggacactatcagtacaagtgcatccccgtggaggacaaccacaaggccgacatcagc 62918674
Query: 972 tcctggttcaatgaggcaatcga 994
|||||||||| ||||| |||||
Sbjct: 62918675 tcctggttcatggaggccatcga 62918697
Score = 61.9 bits (31), Expect = 1e-06
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 393 ggctccgtcaacgtgcgcttcagtaccatcgtgcggcgccgggccaagggc 443
||||| ||||||||||||| || |||||||||||||| ||||||||||||
Sbjct: 62906679 ggctcggtcaacgtgcgctgcaacaccatcgtgcggcggcgggccaagggc 62906729
>Sscrofa_Chr03
|| Length = 144787322
Score = 77.8 bits (39), Expect = 2e-11
Identities = 45/47 (95%)
Strand = Plus / Plus
Query: 1150 tcatctcccccaacttcagcttcatgggccagctgctgcagtttgag 1196
||||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct: 49194241 tcatctcccccaacttcagtttcatggggcagctgctgcagtttgag 49194287
>Sscrofa_Chr14
|| Length = 153851969
Score = 73.8 bits (37), Expect = 3e-10
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 1134 aagcagaggaggagcatcatctcccccaacttcagcttcatgggccagctgctgcagttt 1193
|||||||||||||| | ||||| ||||||||| |||||||||||||||| ||||||| |
Sbjct: 131802875 aagcagaggaggagtgtgatctcgcccaacttcggcttcatgggccagctcctgcagtat 131802934
Query: 1194 gagtc 1198
|||||
Sbjct: 131802935 gagtc 131802939
>gb|GL894700.2| Sus scrofa unplaced genomic scaffold ChrUScaf2584
Length = 159485
Score = 65.9 bits (33), Expect = 8e-08
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 1151 catctcccccaacttcagcttcatgggccagctgctg 1187
||||||||||||||||| |||||||||||||||||||
Sbjct: 55323 catctcccccaacttcaacttcatgggccagctgctg 55359
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 49,722,559
Number of extensions: 636
Number of successful extensions: 636
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 633
Number of HSP's successfully gapped: 10
Length of query: 1963
Length of database: 2,808,509,378
Length adjustment: 22
Effective length of query: 1941
Effective length of database: 2,808,408,574
Effective search space: 5451121042134
Effective search space used: 5451121042134
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)