Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-001041
(979 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001071577.1| casein kinase 1 epsilon [Bos taurus]. 545 e-155
Alignment gi|NP_001095550.1| casein kinase 1, delta [Bos taurus]. 533 e-152
Alignment gi|NP_777136.1| casein kinase I isoform alpha [Bos taurus]. 440 e-123
Alignment gi|XP_002689948.1| PREDICTED: casein kinase I alpha-like [Bos t... 423 e-118
Alignment gi|XP_002699872.1| PREDICTED: casein kinase I-like [Bos taurus]. 408 e-114
Alignment gi|XP_002707254.1| PREDICTED: casein kinase I-like [Bos taurus]. 408 e-114
Alignment gi|XP_002687979.1| PREDICTED: casein kinase 1, delta [Bos tauru... 386 e-107
Alignment gi|XP_002700117.1| PREDICTED: casein kinase I-like [Bos taurus]. 381 e-106
Alignment gi|XP_001788962.1| PREDICTED: casein kinase I-like [Bos taurus]. 381 e-106
Alignment gi|NP_001091628.1| casein kinase I isoform beta [Bos taurus]. 373 e-103
>ref|NP_001071577.1| casein kinase 1 epsilon [Bos taurus].
Length = 466
Score = 545 bits (1404), Expect = e-155
Identities = 266/269 (98%), Positives = 268/269 (99%)
Frame = +2
Query: 173 MELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQ 352
MELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQ
Sbjct: 1 MELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQ 60
Query: 353 GGVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 532
GGVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH
Sbjct: 61 GGVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 120
Query: 533 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 712
SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA
Sbjct: 121 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 180
Query: 713 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 892
SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL
Sbjct: 181 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 240
Query: 893 CKGYPSEFSTYLNFCRSLPFDEQPDYSYL 979
CKGYPSEFSTYLNFCRSL FD++PDYSYL
Sbjct: 241 CKGYPSEFSTYLNFCRSLRFDDKPDYSYL 269
>ref|NP_001095550.1| casein kinase 1, delta [Bos taurus].
Length = 409
Score = 533 bits (1374), Expect = e-152
Identities = 258/269 (95%), Positives = 266/269 (98%)
Frame = +2
Query: 173 MELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQ 352
MELRVGN+YRLGRKIGSGSFGDIYLG +IA+GEEVAIKLECVKTKHPQLHIESK YKMMQ
Sbjct: 1 MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQ 60
Query: 353 GGVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 532
GGVGIP+I+WCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH
Sbjct: 61 GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 120
Query: 533 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 712
SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA
Sbjct: 121 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 180
Query: 713 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 892
SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL
Sbjct: 181 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 240
Query: 893 CKGYPSEFSTYLNFCRSLPFDEQPDYSYL 979
CKGYPSEF+TYLNFCRSL FD++PDYSYL
Sbjct: 241 CKGYPSEFATYLNFCRSLRFDDKPDYSYL 269
>ref|NP_777136.1| casein kinase I isoform alpha [Bos taurus].
Length = 325
Score = 440 bits (1131), Expect = e-123
Identities = 207/268 (77%), Positives = 238/268 (88%)
Frame = +2
Query: 176 ELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQG 355
E VG KY+L RKIGSGSFGDIYL NI +GEEVA+KLE K +HPQL ESK YK++QG
Sbjct: 10 EFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKILQG 69
Query: 356 GVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 535
GVGIP I+W G E DYNV+VM+LLGPSLEDLFNFCSR+F++KTVL+LADQMISRIEY+H+
Sbjct: 70 GVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYVHT 129
Query: 536 KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYAS 715
KNFIHRD+KPDNFLMG+G+ N +++IDFGLAKKYRD RT QHIPYRE+KNLTGTARYAS
Sbjct: 130 KNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARYAS 189
Query: 716 INTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLC 895
IN HLGIEQSRRDD+ESLGYVLMYFN SLPWQGLKAATK+QKYE+ISEKKMSTP+EVLC
Sbjct: 190 INAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATKKQKYEKISEKKMSTPVEVLC 249
Query: 896 KGYPSEFSTYLNFCRSLPFDEQPDYSYL 979
KG+P+EF+ YLN+CR L F+E PDY YL
Sbjct: 250 KGFPAEFAMYLNYCRGLRFEEAPDYMYL 277
>ref|XP_002689948.1| PREDICTED: casein kinase I alpha-like [Bos taurus].
Length = 325
Score = 423 bits (1088), Expect = e-118
Identities = 199/268 (74%), Positives = 234/268 (87%)
Frame = +2
Query: 176 ELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQG 355
E VG KY+L RKI SGSFGD+YL NI +GEEVA+KLE K +HPQL ESK K++QG
Sbjct: 10 EFIVGGKYKLVRKIRSGSFGDMYLAINITNGEEVAVKLESQKARHPQLLYESKLCKILQG 69
Query: 356 GVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 535
VGIP I+W G + DYNV+VM+LLGPSLEDLFNFCSR+F++KTVL+LADQM+ RIEY+H+
Sbjct: 70 EVGIPHIRWYGQQKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMMGRIEYVHT 129
Query: 536 KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYAS 715
KNFIHRD+KPDNFLMG+G+ N +++IDFGLAKKYRD RT QHIPYRE+KNLTGTARYAS
Sbjct: 130 KNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARYAS 189
Query: 716 INTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLC 895
I+ HLGIEQSRRDD+ESLGYVLMYFN SLPWQGLKAATK+QKYE+ISEKKMSTP+EVLC
Sbjct: 190 ISAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATKKQKYEKISEKKMSTPVEVLC 249
Query: 896 KGYPSEFSTYLNFCRSLPFDEQPDYSYL 979
KG+P+EF+ YLN+CR L F+E PDY YL
Sbjct: 250 KGFPAEFAMYLNYCRGLRFEEAPDYMYL 277
>ref|XP_002699872.1| PREDICTED: casein kinase I-like [Bos taurus].
Length = 333
Score = 408 bits (1049), Expect = e-114
Identities = 188/268 (70%), Positives = 229/268 (85%)
Frame = +2
Query: 176 ELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQG 355
E G KY+L RKIGSGSFG +YL NI +GEEVA+KLE K + PQL ES+ YK++QG
Sbjct: 10 EFIAGGKYKLVRKIGSGSFGKVYLAINITNGEEVAVKLEPQKARQPQLLYESRLYKLLQG 69
Query: 356 GVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 535
GVGIP I W G E DYNV+VM+LLGPSLE+LFN+CSR+F++KTVL+LADQMISRIEY+H+
Sbjct: 70 GVGIPRIWWYGQEKDYNVLVMDLLGPSLEELFNYCSRRFTMKTVLMLADQMISRIEYLHT 129
Query: 536 KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYAS 715
K+FIHRD+KPDNFLMG G N ++++DFGLAK+YRD++T QHIPY+E K+LTGTARYAS
Sbjct: 130 KDFIHRDIKPDNFLMGAGSHCNQLFLVDFGLAKRYRDSKTKQHIPYKEKKSLTGTARYAS 189
Query: 716 INTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLC 895
+N+HLGIEQSRRDD+ESLGYVLMYFN SLPWQG+K AT +QKYE+I E KM+TPIE LC
Sbjct: 190 LNSHLGIEQSRRDDMESLGYVLMYFNRSSLPWQGIKTATMKQKYEKICESKMATPIEALC 249
Query: 896 KGYPSEFSTYLNFCRSLPFDEQPDYSYL 979
G+PSEF+TYLN+CR L F+E PDY+YL
Sbjct: 250 NGFPSEFATYLNYCRGLRFEEAPDYTYL 277
>ref|XP_002707254.1| PREDICTED: casein kinase I-like [Bos taurus].
Length = 333
Score = 408 bits (1049), Expect = e-114
Identities = 188/268 (70%), Positives = 229/268 (85%)
Frame = +2
Query: 176 ELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQG 355
E G KY+L RKIGSGSFG +YL NI +GEEVA+KLE K + PQL ES+ YK++QG
Sbjct: 10 EFIAGGKYKLVRKIGSGSFGKVYLAINITNGEEVAVKLEPQKARQPQLLYESRLYKLLQG 69
Query: 356 GVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 535
GVGIP I W G E DYNV+VM+LLGPSLE+LFN+CSR+F++KTVL+LADQMISRIEY+H+
Sbjct: 70 GVGIPRIWWYGQEKDYNVLVMDLLGPSLEELFNYCSRRFTMKTVLMLADQMISRIEYLHT 129
Query: 536 KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYAS 715
K+FIHRD+KPDNFLMG G N ++++DFGLAK+YRD++T QHIPY+E K+LTGTARYAS
Sbjct: 130 KDFIHRDIKPDNFLMGAGSHCNQLFLVDFGLAKRYRDSKTKQHIPYKEKKSLTGTARYAS 189
Query: 716 INTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLC 895
+N+HLGIEQSRRDD+ESLGYVLMYFN SLPWQG+K AT +QKYE+I E KM+TPIE LC
Sbjct: 190 LNSHLGIEQSRRDDMESLGYVLMYFNRSSLPWQGIKTATMKQKYEKICESKMATPIEALC 249
Query: 896 KGYPSEFSTYLNFCRSLPFDEQPDYSYL 979
G+PSEF+TYLN+CR L F+E PDY+YL
Sbjct: 250 NGFPSEFATYLNYCRGLRFEEAPDYTYL 277
>ref|XP_002687979.1| PREDICTED: casein kinase 1, delta [Bos taurus].
Length = 259
Score = 386 bits (992), Expect = e-107
Identities = 192/202 (95%), Positives = 194/202 (96%)
Frame = +2
Query: 173 MELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQ 352
MELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQ
Sbjct: 1 MELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQ 60
Query: 353 GGVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 532
GGVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH
Sbjct: 61 GGVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 120
Query: 533 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 712
SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA
Sbjct: 121 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 180
Query: 713 SINTHLGIEQSRRDDLESLGYV 778
SINTHLGI + R S GY+
Sbjct: 181 SINTHLGIGECARPG--SRGYL 200
>ref|XP_002700117.1| PREDICTED: casein kinase I-like [Bos taurus].
Length = 336
Score = 381 bits (978), Expect = e-106
Identities = 175/268 (65%), Positives = 224/268 (83%)
Frame = +2
Query: 176 ELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQG 355
++ VG +Y+L R+IGSGSFG ++L ++ + E+VA+KLE T+ P+L E + Y ++QG
Sbjct: 10 DVLVGGRYKLVREIGSGSFGHVHLAIDLTNHEQVAVKLESQNTRQPRLLYEKELYNILQG 69
Query: 356 GVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 535
GVGIP I+W G E DYNV+VM+LLGPSLEDLFNFCSR+FS+KTVL+LADQMISRIEY+H+
Sbjct: 70 GVGIPQIRWYGQETDYNVLVMDLLGPSLEDLFNFCSRRFSMKTVLMLADQMISRIEYVHT 129
Query: 536 KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYAS 715
+N IHRD+KP+NFLMG G++ +++IDFGLAKKYRD RT QHIPYR K+LTGT +AS
Sbjct: 130 QNLIHRDIKPENFLMGTGQQWKELFLIDFGLAKKYRDNRTGQHIPYRSGKSLTGTPSFAS 189
Query: 716 INTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLC 895
I+ H+GIEQSRRDD+ES+G+VLMYFN GSLPWQGLKAAT +QK E+ISE KM+TP++VLC
Sbjct: 190 ISAHIGIEQSRRDDMESIGHVLMYFNRGSLPWQGLKAATMKQKCEQISEMKMTTPVDVLC 249
Query: 896 KGYPSEFSTYLNFCRSLPFDEQPDYSYL 979
KG+P+EF+ YL CR L F+E PDY YL
Sbjct: 250 KGFPAEFAMYLKHCRGLSFEEAPDYRYL 277
>ref|XP_001788962.1| PREDICTED: casein kinase I-like [Bos taurus].
Length = 336
Score = 381 bits (978), Expect = e-106
Identities = 175/268 (65%), Positives = 224/268 (83%)
Frame = +2
Query: 176 ELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQG 355
++ VG +Y+L R+IGSGSFG ++L ++ + E+VA+KLE T+ P+L E + Y ++QG
Sbjct: 10 DVLVGGRYKLVREIGSGSFGHVHLAIDLTNHEQVAVKLESQNTRQPRLLYEKELYNILQG 69
Query: 356 GVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 535
GVGIP I+W G E DYNV+VM+LLGPSLEDLFNFCSR+FS+KTVL+LADQMISRIEY+H+
Sbjct: 70 GVGIPQIRWYGQETDYNVLVMDLLGPSLEDLFNFCSRRFSMKTVLMLADQMISRIEYVHT 129
Query: 536 KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYAS 715
+N IHRD+KP+NFLMG G++ +++IDFGLAKKYRD RT QHIPYR K+LTGT +AS
Sbjct: 130 QNLIHRDIKPENFLMGTGQQWKELFLIDFGLAKKYRDNRTGQHIPYRSGKSLTGTPSFAS 189
Query: 716 INTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLC 895
I+ H+GIEQSRRDD+ES+G+VLMYFN GSLPWQGLKAAT +QK E+ISE KM+TP++VLC
Sbjct: 190 ISAHIGIEQSRRDDMESIGHVLMYFNRGSLPWQGLKAATMKQKCEQISEMKMTTPVDVLC 249
Query: 896 KGYPSEFSTYLNFCRSLPFDEQPDYSYL 979
KG+P+EF+ YL CR L F+E PDY YL
Sbjct: 250 KGFPAEFAMYLKHCRGLSFEEAPDYRYL 277
>ref|NP_001091628.1| casein kinase I isoform beta [Bos taurus].
Length = 336
Score = 373 bits (958), Expect = e-103
Identities = 174/268 (64%), Positives = 217/268 (80%)
Frame = +2
Query: 176 ELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQG 355
++ VG +Y+L R+IG GSFG +YL ++ + E+VA+KLE T+ P+L E + Y +QG
Sbjct: 10 DVLVGGRYKLVREIGFGSFGHVYLAIDLTNHEQVAVKLESENTRQPRLLHEKELYNFLQG 69
Query: 356 GVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 535
GVGIP I+W G E DYNV+VM+LLGPSLEDLFNFCSR+FS+KTVL+LADQMISRIEY+HS
Sbjct: 70 GVGIPQIRWYGQETDYNVLVMDLLGPSLEDLFNFCSRRFSMKTVLMLADQMISRIEYVHS 129
Query: 536 KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYAS 715
+N IHRD+KPDNFLMG G + ++++DFGLAKKYRD RT QHIP+R K+ GT AS
Sbjct: 130 RNLIHRDIKPDNFLMGTGPQWKKLFLVDFGLAKKYRDNRTGQHIPHRSGKSFIGTPFCAS 189
Query: 716 INTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLC 895
I+ HLGIEQSRRDD+ES+GYVLMYFN GSLPWQGLKAAT +QK E+ISE KM+TP++VLC
Sbjct: 190 ISAHLGIEQSRRDDMESIGYVLMYFNRGSLPWQGLKAATLKQKCEKISEMKMTTPVDVLC 249
Query: 896 KGYPSEFSTYLNFCRSLPFDEQPDYSYL 979
KG+P EF+ YL +C L F+E PDY YL
Sbjct: 250 KGFPIEFAMYLKYCLRLSFEEAPDYRYL 277
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 31,058,017
Number of extensions: 840906
Number of successful extensions: 3883
Number of sequences better than 1.0e-05: 179
Number of HSP's gapped: 3587
Number of HSP's successfully gapped: 180
Length of query: 326
Length of database: 17,681,374
Length adjustment: 102
Effective length of query: 224
Effective length of database: 14,306,398
Effective search space: 3204633152
Effective search space used: 3204633152
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-001041
(979 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_861014.1| PREDICTED: similar to casein kinase 1 epsilon i... 545 e-155
Alignment gi|XP_860987.1| PREDICTED: similar to casein kinase 1 epsilon i... 545 e-155
Alignment gi|XP_531738.2| PREDICTED: similar to casein kinase 1 epsilon i... 545 e-155
Alignment gi|XP_850168.1| PREDICTED: similar to casein kinase 1 epsilon i... 545 e-155
Alignment gi|XP_860927.1| PREDICTED: similar to casein kinase 1 epsilon i... 493 e-139
Alignment gi|XP_533137.2| PREDICTED: similar to casein kinase 1, delta is... 483 e-136
Alignment gi|XP_867771.1| PREDICTED: similar to casein kinase 1, alpha 1 ... 440 e-123
Alignment gi|XP_536470.2| PREDICTED: similar to Casein kinase I, alpha is... 440 e-123
Alignment gi|XP_867638.1| PREDICTED: similar to Casein kinase I, alpha is... 440 e-123
Alignment gi|XP_867736.1| PREDICTED: similar to Casein kinase I, alpha is... 439 e-123
>ref|XP_861014.1| PREDICTED: similar to casein kinase 1 epsilon isoform 8 [Canis
familiaris].
Length = 385
Score = 545 bits (1404), Expect = e-155
Identities = 266/269 (98%), Positives = 268/269 (99%)
Frame = +2
Query: 173 MELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQ 352
MELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQ
Sbjct: 1 MELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQ 60
Query: 353 GGVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 532
GGVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH
Sbjct: 61 GGVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 120
Query: 533 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 712
SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA
Sbjct: 121 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 180
Query: 713 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 892
SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL
Sbjct: 181 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 240
Query: 893 CKGYPSEFSTYLNFCRSLPFDEQPDYSYL 979
CKGYPSEFSTYLNFCRSL FD++PDYSYL
Sbjct: 241 CKGYPSEFSTYLNFCRSLRFDDKPDYSYL 269
>ref|XP_860987.1| PREDICTED: similar to casein kinase 1 epsilon isoform 7 [Canis
familiaris].
Length = 431
Score = 545 bits (1404), Expect = e-155
Identities = 266/269 (98%), Positives = 268/269 (99%)
Frame = +2
Query: 173 MELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQ 352
MELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQ
Sbjct: 1 MELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQ 60
Query: 353 GGVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 532
GGVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH
Sbjct: 61 GGVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 120
Query: 533 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 712
SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA
Sbjct: 121 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 180
Query: 713 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 892
SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL
Sbjct: 181 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 240
Query: 893 CKGYPSEFSTYLNFCRSLPFDEQPDYSYL 979
CKGYPSEFSTYLNFCRSL FD++PDYSYL
Sbjct: 241 CKGYPSEFSTYLNFCRSLRFDDKPDYSYL 269
>ref|XP_531738.2| PREDICTED: similar to casein kinase 1 epsilon isoform 1 [Canis
familiaris].
Length = 367
Score = 545 bits (1404), Expect = e-155
Identities = 266/269 (98%), Positives = 268/269 (99%)
Frame = +2
Query: 173 MELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQ 352
MELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQ
Sbjct: 1 MELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQ 60
Query: 353 GGVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 532
GGVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH
Sbjct: 61 GGVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 120
Query: 533 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 712
SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA
Sbjct: 121 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 180
Query: 713 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 892
SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL
Sbjct: 181 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 240
Query: 893 CKGYPSEFSTYLNFCRSLPFDEQPDYSYL 979
CKGYPSEFSTYLNFCRSL FD++PDYSYL
Sbjct: 241 CKGYPSEFSTYLNFCRSLRFDDKPDYSYL 269
>ref|XP_850168.1| PREDICTED: similar to casein kinase 1 epsilon isoform 3 [Canis
familiaris].
Length = 416
Score = 545 bits (1404), Expect = e-155
Identities = 266/269 (98%), Positives = 268/269 (99%)
Frame = +2
Query: 173 MELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQ 352
MELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQ
Sbjct: 1 MELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQ 60
Query: 353 GGVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 532
GGVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH
Sbjct: 61 GGVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 120
Query: 533 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 712
SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA
Sbjct: 121 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 180
Query: 713 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 892
SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL
Sbjct: 181 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 240
Query: 893 CKGYPSEFSTYLNFCRSLPFDEQPDYSYL 979
CKGYPSEFSTYLNFCRSL FD++PDYSYL
Sbjct: 241 CKGYPSEFSTYLNFCRSLRFDDKPDYSYL 269
>ref|XP_860927.1| PREDICTED: similar to casein kinase 1 epsilon isoform 6 [Canis
familiaris].
Length = 407
Score = 493 bits (1269), Expect = e-139
Identities = 247/269 (91%), Positives = 253/269 (94%)
Frame = +2
Query: 173 MELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQ 352
MELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQ
Sbjct: 1 MELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQ 60
Query: 353 GGVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 532
GGVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH
Sbjct: 61 GGVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 120
Query: 533 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 712
SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA
Sbjct: 121 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 180
Query: 713 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 892
SINTHLGI + S+G ++ SLPWQGLKAATKRQKYERISEKKMSTPIEVL
Sbjct: 181 SINTHLGIGEP-----FSVGGMI----TRSLPWQGLKAATKRQKYERISEKKMSTPIEVL 231
Query: 893 CKGYPSEFSTYLNFCRSLPFDEQPDYSYL 979
CKGYPSEFSTYLNFCRSL FD++PDYSYL
Sbjct: 232 CKGYPSEFSTYLNFCRSLRFDDKPDYSYL 260
>ref|XP_533137.2| PREDICTED: similar to casein kinase 1, delta isoform 2 [Canis
familiaris].
Length = 393
Score = 483 bits (1242), Expect = e-136
Identities = 233/244 (95%), Positives = 240/244 (98%)
Frame = +2
Query: 248 GANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQGGVGIPSIKWCGAEGDYNVMVMELL 427
G +IA+GEEVAIKLECVKTKHPQLHIESK YKMMQGGVGIP+I+WCGAEGDYNVMVMELL
Sbjct: 10 GTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL 69
Query: 428 GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLV 607
GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLV
Sbjct: 70 GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLV 129
Query: 608 YIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMY 787
YIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMY
Sbjct: 130 YIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMY 189
Query: 788 FNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFSTYLNFCRSLPFDEQPD 967
FNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCK YPSEF+TYLNFCRSL FD++PD
Sbjct: 190 FNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKSYPSEFATYLNFCRSLRFDDKPD 249
Query: 968 YSYL 979
YSYL
Sbjct: 250 YSYL 253
>ref|XP_867771.1| PREDICTED: similar to casein kinase 1, alpha 1 isoform 15 [Canis
familiaris].
Length = 325
Score = 440 bits (1131), Expect = e-123
Identities = 207/268 (77%), Positives = 238/268 (88%)
Frame = +2
Query: 176 ELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQG 355
E VG KY+L RKIGSGSFGDIYL NI +GEEVA+KLE K +HPQL ESK YK++QG
Sbjct: 10 EFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKILQG 69
Query: 356 GVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 535
GVGIP I+W G E DYNV+VM+LLGPSLEDLFNFCSR+F++KTVL+LADQMISRIEY+H+
Sbjct: 70 GVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYVHT 129
Query: 536 KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYAS 715
KNFIHRD+KPDNFLMG+G+ N +++IDFGLAKKYRD RT QHIPYRE+KNLTGTARYAS
Sbjct: 130 KNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARYAS 189
Query: 716 INTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLC 895
IN HLGIEQSRRDD+ESLGYVLMYFN SLPWQGLKAATK+QKYE+ISEKKMSTP+EVLC
Sbjct: 190 INAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATKKQKYEKISEKKMSTPVEVLC 249
Query: 896 KGYPSEFSTYLNFCRSLPFDEQPDYSYL 979
KG+P+EF+ YLN+CR L F+E PDY YL
Sbjct: 250 KGFPAEFAMYLNYCRGLRFEEAPDYMYL 277
>ref|XP_536470.2| PREDICTED: similar to Casein kinase I, alpha isoform (CKI-alpha)
(CK1) isoform 1 [Canis familiaris].
Length = 337
Score = 440 bits (1131), Expect = e-123
Identities = 207/268 (77%), Positives = 238/268 (88%)
Frame = +2
Query: 176 ELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQG 355
E VG KY+L RKIGSGSFGDIYL NI +GEEVA+KLE K +HPQL ESK YK++QG
Sbjct: 10 EFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKILQG 69
Query: 356 GVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 535
GVGIP I+W G E DYNV+VM+LLGPSLEDLFNFCSR+F++KTVL+LADQMISRIEY+H+
Sbjct: 70 GVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYVHT 129
Query: 536 KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYAS 715
KNFIHRD+KPDNFLMG+G+ N +++IDFGLAKKYRD RT QHIPYRE+KNLTGTARYAS
Sbjct: 130 KNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARYAS 189
Query: 716 INTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLC 895
IN HLGIEQSRRDD+ESLGYVLMYFN SLPWQGLKAATK+QKYE+ISEKKMSTP+EVLC
Sbjct: 190 INAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATKKQKYEKISEKKMSTPVEVLC 249
Query: 896 KGYPSEFSTYLNFCRSLPFDEQPDYSYL 979
KG+P+EF+ YLN+CR L F+E PDY YL
Sbjct: 250 KGFPAEFAMYLNYCRGLRFEEAPDYMYL 277
>ref|XP_867638.1| PREDICTED: similar to Casein kinase I, alpha isoform (CKI-alpha)
(CK1) isoform 3 [Canis familiaris].
Length = 336
Score = 440 bits (1131), Expect = e-123
Identities = 207/268 (77%), Positives = 238/268 (88%)
Frame = +2
Query: 176 ELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQG 355
E VG KY+L RKIGSGSFGDIYL NI +GEEVA+KLE K +HPQL ESK YK++QG
Sbjct: 10 EFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKILQG 69
Query: 356 GVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 535
GVGIP I+W G E DYNV+VM+LLGPSLEDLFNFCSR+F++KTVL+LADQMISRIEY+H+
Sbjct: 70 GVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYVHT 129
Query: 536 KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYAS 715
KNFIHRD+KPDNFLMG+G+ N +++IDFGLAKKYRD RT QHIPYRE+KNLTGTARYAS
Sbjct: 130 KNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARYAS 189
Query: 716 INTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLC 895
IN HLGIEQSRRDD+ESLGYVLMYFN SLPWQGLKAATK+QKYE+ISEKKMSTP+EVLC
Sbjct: 190 INAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATKKQKYEKISEKKMSTPVEVLC 249
Query: 896 KGYPSEFSTYLNFCRSLPFDEQPDYSYL 979
KG+P+EF+ YLN+CR L F+E PDY YL
Sbjct: 250 KGFPAEFAMYLNYCRGLRFEEAPDYMYL 277
>ref|XP_867736.1| PREDICTED: similar to Casein kinase I, alpha isoform (CKI-alpha)
(CK1) isoform 12 [Canis familiaris].
Length = 341
Score = 439 bits (1129), Expect = e-123
Identities = 209/272 (76%), Positives = 240/272 (88%), Gaps = 4/272 (1%)
Frame = +2
Query: 176 ELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQG 355
E VG KY+L RKIGSGSFGDIYL NI +GEEVA+KLE K +HPQL ESK YK++QG
Sbjct: 10 EFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKILQG 69
Query: 356 GVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 535
GVGIP I+W G E DYNV+VM+LLGPSLEDLFNFCSR+F++KTVL+LADQMISRIEY+H+
Sbjct: 70 GVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYVHT 129
Query: 536 KNFIHRDVKPDNFLMGLG----KKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTA 703
KNFIHRD+KPDNFLMG+G K G+L+++IDFGLAKKYRD RT QHIPYRE+KNLTGTA
Sbjct: 130 KNFIHRDIKPDNFLMGIGRHCNKTGSLLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTA 189
Query: 704 RYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPI 883
RYASIN HLGIEQSRRDD+ESLGYVLMYFN SLPWQGLKAATK+QKYE+ISEKKMSTP+
Sbjct: 190 RYASINAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATKKQKYEKISEKKMSTPV 249
Query: 884 EVLCKGYPSEFSTYLNFCRSLPFDEQPDYSYL 979
EVLCKG+P+EF+ YLN+CR L F+E PDY YL
Sbjct: 250 EVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYL 281
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 32,206,665
Number of extensions: 818958
Number of successful extensions: 4386
Number of sequences better than 1.0e-05: 326
Number of HSP's gapped: 3896
Number of HSP's successfully gapped: 329
Length of query: 326
Length of database: 18,874,504
Length adjustment: 103
Effective length of query: 223
Effective length of database: 15,440,896
Effective search space: 3443319808
Effective search space used: 3443319808
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-001041
(979 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_689407.1| casein kinase I isoform epsilon [Homo sapiens]. 545 e-155
Alignment gi|NP_001885.1| casein kinase I isoform epsilon [Homo sapiens]. 545 e-155
Alignment gi|NP_620693.1| casein kinase I isoform delta isoform 2 [Homo s... 533 e-152
Alignment gi|NP_001884.2| casein kinase I isoform delta isoform 1 [Homo s... 533 e-152
Alignment gi|NP_001883.4| casein kinase I isoform alpha isoform 2 [Homo s... 440 e-123
Alignment gi|NP_001020276.1| casein kinase I isoform alpha isoform 1 [Hom... 425 e-119
Alignment gi|NP_660204.2| casein kinase I isoform alpha-like [Homo sapien... 418 e-117
Alignment gi|NP_071331.2| casein kinase I isoform gamma-1 [Homo sapiens]. 335 4e-92
Alignment gi|NP_001038188.1| casein kinase I isoform gamma-3 isoform 4 [H... 335 5e-92
Alignment gi|NP_001038187.1| casein kinase I isoform gamma-3 isoform 3 [H... 335 5e-92
>ref|NP_689407.1| casein kinase I isoform epsilon [Homo sapiens].
Length = 416
Score = 545 bits (1404), Expect = e-155
Identities = 266/269 (98%), Positives = 268/269 (99%)
Frame = +2
Query: 173 MELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQ 352
MELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQ
Sbjct: 1 MELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQ 60
Query: 353 GGVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 532
GGVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH
Sbjct: 61 GGVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 120
Query: 533 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 712
SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA
Sbjct: 121 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 180
Query: 713 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 892
SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL
Sbjct: 181 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 240
Query: 893 CKGYPSEFSTYLNFCRSLPFDEQPDYSYL 979
CKGYPSEFSTYLNFCRSL FD++PDYSYL
Sbjct: 241 CKGYPSEFSTYLNFCRSLRFDDKPDYSYL 269
>ref|NP_001885.1| casein kinase I isoform epsilon [Homo sapiens].
Length = 416
Score = 545 bits (1404), Expect = e-155
Identities = 266/269 (98%), Positives = 268/269 (99%)
Frame = +2
Query: 173 MELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQ 352
MELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQ
Sbjct: 1 MELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQ 60
Query: 353 GGVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 532
GGVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH
Sbjct: 61 GGVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 120
Query: 533 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 712
SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA
Sbjct: 121 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 180
Query: 713 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 892
SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL
Sbjct: 181 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 240
Query: 893 CKGYPSEFSTYLNFCRSLPFDEQPDYSYL 979
CKGYPSEFSTYLNFCRSL FD++PDYSYL
Sbjct: 241 CKGYPSEFSTYLNFCRSLRFDDKPDYSYL 269
>ref|NP_620693.1| casein kinase I isoform delta isoform 2 [Homo sapiens].
Length = 409
Score = 533 bits (1374), Expect = e-152
Identities = 258/269 (95%), Positives = 266/269 (98%)
Frame = +2
Query: 173 MELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQ 352
MELRVGN+YRLGRKIGSGSFGDIYLG +IA+GEEVAIKLECVKTKHPQLHIESK YKMMQ
Sbjct: 1 MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQ 60
Query: 353 GGVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 532
GGVGIP+I+WCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH
Sbjct: 61 GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 120
Query: 533 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 712
SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA
Sbjct: 121 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 180
Query: 713 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 892
SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL
Sbjct: 181 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 240
Query: 893 CKGYPSEFSTYLNFCRSLPFDEQPDYSYL 979
CKGYPSEF+TYLNFCRSL FD++PDYSYL
Sbjct: 241 CKGYPSEFATYLNFCRSLRFDDKPDYSYL 269
>ref|NP_001884.2| casein kinase I isoform delta isoform 1 [Homo sapiens].
Length = 415
Score = 533 bits (1374), Expect = e-152
Identities = 258/269 (95%), Positives = 266/269 (98%)
Frame = +2
Query: 173 MELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQ 352
MELRVGN+YRLGRKIGSGSFGDIYLG +IA+GEEVAIKLECVKTKHPQLHIESK YKMMQ
Sbjct: 1 MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQ 60
Query: 353 GGVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 532
GGVGIP+I+WCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH
Sbjct: 61 GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 120
Query: 533 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 712
SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA
Sbjct: 121 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 180
Query: 713 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 892
SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL
Sbjct: 181 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 240
Query: 893 CKGYPSEFSTYLNFCRSLPFDEQPDYSYL 979
CKGYPSEF+TYLNFCRSL FD++PDYSYL
Sbjct: 241 CKGYPSEFATYLNFCRSLRFDDKPDYSYL 269
>ref|NP_001883.4| casein kinase I isoform alpha isoform 2 [Homo sapiens].
Length = 337
Score = 440 bits (1131), Expect = e-123
Identities = 207/268 (77%), Positives = 238/268 (88%)
Frame = +2
Query: 176 ELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQG 355
E VG KY+L RKIGSGSFGDIYL NI +GEEVA+KLE K +HPQL ESK YK++QG
Sbjct: 10 EFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKILQG 69
Query: 356 GVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 535
GVGIP I+W G E DYNV+VM+LLGPSLEDLFNFCSR+F++KTVL+LADQMISRIEY+H+
Sbjct: 70 GVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYVHT 129
Query: 536 KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYAS 715
KNFIHRD+KPDNFLMG+G+ N +++IDFGLAKKYRD RT QHIPYRE+KNLTGTARYAS
Sbjct: 130 KNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARYAS 189
Query: 716 INTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLC 895
IN HLGIEQSRRDD+ESLGYVLMYFN SLPWQGLKAATK+QKYE+ISEKKMSTP+EVLC
Sbjct: 190 INAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATKKQKYEKISEKKMSTPVEVLC 249
Query: 896 KGYPSEFSTYLNFCRSLPFDEQPDYSYL 979
KG+P+EF+ YLN+CR L F+E PDY YL
Sbjct: 250 KGFPAEFAMYLNYCRGLRFEEAPDYMYL 277
>ref|NP_001020276.1| casein kinase I isoform alpha isoform 1 [Homo sapiens].
Length = 365
Score = 425 bits (1092), Expect = e-119
Identities = 207/296 (69%), Positives = 238/296 (80%), Gaps = 28/296 (9%)
Frame = +2
Query: 176 ELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQG 355
E VG KY+L RKIGSGSFGDIYL NI +GEEVA+KLE K +HPQL ESK YK++QG
Sbjct: 10 EFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKILQG 69
Query: 356 GVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 535
GVGIP I+W G E DYNV+VM+LLGPSLEDLFNFCSR+F++KTVL+LADQMISRIEY+H+
Sbjct: 70 GVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYVHT 129
Query: 536 KNFIHRDVKPDNFLMGLGKKG----------------------------NLVYIIDFGLA 631
KNFIHRD+KPDNFLMG+G+ N +++IDFGLA
Sbjct: 130 KNFIHRDIKPDNFLMGIGRHCNKCLESPVGKRKRSMTVSTSQDPSFSGLNQLFLIDFGLA 189
Query: 632 KKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPW 811
KKYRD RT QHIPYRE+KNLTGTARYASIN HLGIEQSRRDD+ESLGYVLMYFN SLPW
Sbjct: 190 KKYRDNRTRQHIPYREDKNLTGTARYASINAHLGIEQSRRDDMESLGYVLMYFNRTSLPW 249
Query: 812 QGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFSTYLNFCRSLPFDEQPDYSYL 979
QGLKAATK+QKYE+ISEKKMSTP+EVLCKG+P+EF+ YLN+CR L F+E PDY YL
Sbjct: 250 QGLKAATKKQKYEKISEKKMSTPVEVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYL 305
>ref|NP_660204.2| casein kinase I isoform alpha-like [Homo sapiens].
Length = 337
Score = 418 bits (1075), Expect = e-117
Identities = 196/268 (73%), Positives = 230/268 (85%)
Frame = +2
Query: 176 ELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQG 355
EL VG KY+L RKIGSGSFGD+YLG +GE+VA+KLE K KHPQL ESK Y ++QG
Sbjct: 10 ELVVGGKYKLVRKIGSGSFGDVYLGITTTNGEDVAVKLESQKVKHPQLLYESKLYTILQG 69
Query: 356 GVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 535
GVGIP + W G E D NV+VM+LLGPSLEDLFNFCSR+F++KTVL+LADQMISRIEY+H+
Sbjct: 70 GVGIPHMHWYGQEKDNNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYVHT 129
Query: 536 KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYAS 715
KNF+HRD+KPDNFLMG G+ N +++IDFGLAKKYRD RT QHIPYRE+K+L GT RYAS
Sbjct: 130 KNFLHRDIKPDNFLMGTGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKHLIGTVRYAS 189
Query: 716 INTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLC 895
IN HLGIEQSRRDD+ESLGYV MYFN SLPWQGL+A TK+QKYE+ISEKKMSTP+EVLC
Sbjct: 190 INAHLGIEQSRRDDMESLGYVFMYFNRTSLPWQGLRAMTKKQKYEKISEKKMSTPVEVLC 249
Query: 896 KGYPSEFSTYLNFCRSLPFDEQPDYSYL 979
KG+P+EF+ YLN+CR L F+E PDY YL
Sbjct: 250 KGFPAEFAMYLNYCRGLRFEEVPDYMYL 277
>ref|NP_071331.2| casein kinase I isoform gamma-1 [Homo sapiens].
Length = 422
Score = 335 bits (859), Expect = 4e-92
Identities = 160/270 (59%), Positives = 212/270 (78%), Gaps = 3/270 (1%)
Frame = +2
Query: 179 LRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMM-QG 355
L VG +R+G+KIG G+FG++ LG N+ + E VAIKLE +K++ PQLH+E +FYK +
Sbjct: 38 LMVGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPIKSRAPQLHLEYRFYKQLGSA 97
Query: 356 GVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 535
G G+P + + G G YN MV+ELLGPSLEDLF+ C R F+LKTVL++A Q++SR+EY+HS
Sbjct: 98 GEGLPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFTLKTVLMIAIQLLSRMEYVHS 157
Query: 536 KNFIHRDVKPDNFLMGL--GKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARY 709
KN I+RDVKP+NFL+G KK ++++IIDFGLAK+Y D T +HIPYRE+K+LTGTARY
Sbjct: 158 KNLIYRDVKPENFLIGRQGNKKEHVIHIIDFGLAKEYIDPETKKHIPYREHKSLTGTARY 217
Query: 710 ASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEV 889
SINTHLG EQSRRDDLE+LG++ MYF GSLPWQGLKA T +++Y++I + K +TPIE
Sbjct: 218 MSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRNTPIEA 277
Query: 890 LCKGYPSEFSTYLNFCRSLPFDEQPDYSYL 979
LC+ +P E +TYL + R L F E+PDY YL
Sbjct: 278 LCENFPEEMATYLRYVRRLDFFEKPDYEYL 307
>ref|NP_001038188.1| casein kinase I isoform gamma-3 isoform 4 [Homo sapiens].
Length = 455
Score = 335 bits (858), Expect = 5e-92
Identities = 163/269 (60%), Positives = 211/269 (78%), Gaps = 2/269 (0%)
Frame = +2
Query: 179 LRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQGG 358
L VG +R+G+KIG G+FG++ LG N+ + E VAIKLE +K++ PQLH+E +FYK + G
Sbjct: 37 LMVGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSG 96
Query: 359 VGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK 538
GIP + + G G YN MV+ELLGPSLEDLF+ C R FSLKTVL++A Q+ISR+EY+HSK
Sbjct: 97 DGIPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSK 156
Query: 539 NFIHRDVKPDNFLMGL--GKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 712
N I+RDVKP+NFL+G K +++IIDFGLAK+Y D T +HIPYRE+K+LTGTARY
Sbjct: 157 NLIYRDVKPENFLIGRPGNKTQQVIHIIDFGLAKEYIDPETKKHIPYREHKSLTGTARYM 216
Query: 713 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 892
SINTHLG EQSRRDDLE+LG++ MYF GSLPWQGLKA T +++Y++I + K +TPIEVL
Sbjct: 217 SINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVL 276
Query: 893 CKGYPSEFSTYLNFCRSLPFDEQPDYSYL 979
C+ +P E +TYL + R L F E+PDY YL
Sbjct: 277 CENFP-EMATYLRYVRRLDFFEKPDYDYL 304
>ref|NP_001038187.1| casein kinase I isoform gamma-3 isoform 3 [Homo sapiens].
Length = 415
Score = 335 bits (858), Expect = 5e-92
Identities = 163/269 (60%), Positives = 211/269 (78%), Gaps = 2/269 (0%)
Frame = +2
Query: 179 LRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQGG 358
L VG +R+G+KIG G+FG++ LG N+ + E VAIKLE +K++ PQLH+E +FYK + G
Sbjct: 37 LMVGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSG 96
Query: 359 VGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK 538
GIP + + G G YN MV+ELLGPSLEDLF+ C R FSLKTVL++A Q+ISR+EY+HSK
Sbjct: 97 DGIPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSK 156
Query: 539 NFIHRDVKPDNFLMGL--GKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 712
N I+RDVKP+NFL+G K +++IIDFGLAK+Y D T +HIPYRE+K+LTGTARY
Sbjct: 157 NLIYRDVKPENFLIGRPGNKTQQVIHIIDFGLAKEYIDPETKKHIPYREHKSLTGTARYM 216
Query: 713 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 892
SINTHLG EQSRRDDLE+LG++ MYF GSLPWQGLKA T +++Y++I + K +TPIEVL
Sbjct: 217 SINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVL 276
Query: 893 CKGYPSEFSTYLNFCRSLPFDEQPDYSYL 979
C+ +P E +TYL + R L F E+PDY YL
Sbjct: 277 CENFP-EMATYLRYVRRLDFFEKPDYDYL 304
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 31,440,975
Number of extensions: 795267
Number of successful extensions: 4252
Number of sequences better than 1.0e-05: 265
Number of HSP's gapped: 3788
Number of HSP's successfully gapped: 265
Length of query: 326
Length of database: 18,297,164
Length adjustment: 103
Effective length of query: 223
Effective length of database: 14,901,872
Effective search space: 3323117456
Effective search space used: 3323117456
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-001041
(979 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_038795.3| casein kinase I isoform epsilon [Mus musculus]. 545 e-155
Alignment gi|NP_620690.1| casein kinase I isoform delta isoform 1 [Mus mu... 533 e-152
Alignment gi|NP_082150.1| casein kinase I isoform delta isoform 2 [Mus mu... 533 e-152
Alignment gi|NP_666199.1| casein kinase I isoform alpha [Mus musculus]. 440 e-124
Alignment gi|NP_690022.2| casein kinase I isoform gamma-3 [Mus musculus]. 339 2e-93
Alignment gi|NP_775277.2| casein kinase I isoform gamma-1 [Mus musculus]. 335 3e-92
Alignment gi|NP_001153063.1| casein kinase I isoform gamma-2 isoform 2 [M... 332 3e-91
Alignment gi|NP_598763.1| casein kinase I isoform gamma-2 isoform 1 [Mus ... 318 4e-87
Alignment gi|NP_001156336.1| tau-tubulin kinase 1 [Mus musculus]. 160 1e-39
Alignment gi|NP_001020028.1| tau-tubulin kinase 2 isoform 2 [Mus musculus]. 157 9e-39
>ref|NP_038795.3| casein kinase I isoform epsilon [Mus musculus].
Length = 416
Score = 545 bits (1404), Expect = e-155
Identities = 266/269 (98%), Positives = 268/269 (99%)
Frame = +2
Query: 173 MELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQ 352
MELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQ
Sbjct: 1 MELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQ 60
Query: 353 GGVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 532
GGVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH
Sbjct: 61 GGVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 120
Query: 533 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 712
SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA
Sbjct: 121 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 180
Query: 713 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 892
SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL
Sbjct: 181 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 240
Query: 893 CKGYPSEFSTYLNFCRSLPFDEQPDYSYL 979
CKGYPSEFSTYLNFCRSL FD++PDYSYL
Sbjct: 241 CKGYPSEFSTYLNFCRSLRFDDKPDYSYL 269
>ref|NP_620690.1| casein kinase I isoform delta isoform 1 [Mus musculus].
Length = 415
Score = 533 bits (1374), Expect = e-152
Identities = 258/269 (95%), Positives = 266/269 (98%)
Frame = +2
Query: 173 MELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQ 352
MELRVGN+YRLGRKIGSGSFGDIYLG +IA+GEEVAIKLECVKTKHPQLHIESK YKMMQ
Sbjct: 1 MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQ 60
Query: 353 GGVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 532
GGVGIP+I+WCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH
Sbjct: 61 GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 120
Query: 533 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 712
SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA
Sbjct: 121 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 180
Query: 713 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 892
SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL
Sbjct: 181 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 240
Query: 893 CKGYPSEFSTYLNFCRSLPFDEQPDYSYL 979
CKGYPSEF+TYLNFCRSL FD++PDYSYL
Sbjct: 241 CKGYPSEFATYLNFCRSLRFDDKPDYSYL 269
>ref|NP_082150.1| casein kinase I isoform delta isoform 2 [Mus musculus].
Length = 409
Score = 533 bits (1374), Expect = e-152
Identities = 258/269 (95%), Positives = 266/269 (98%)
Frame = +2
Query: 173 MELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQ 352
MELRVGN+YRLGRKIGSGSFGDIYLG +IA+GEEVAIKLECVKTKHPQLHIESK YKMMQ
Sbjct: 1 MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQ 60
Query: 353 GGVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 532
GGVGIP+I+WCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH
Sbjct: 61 GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 120
Query: 533 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 712
SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA
Sbjct: 121 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 180
Query: 713 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 892
SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL
Sbjct: 181 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 240
Query: 893 CKGYPSEFSTYLNFCRSLPFDEQPDYSYL 979
CKGYPSEF+TYLNFCRSL FD++PDYSYL
Sbjct: 241 CKGYPSEFATYLNFCRSLRFDDKPDYSYL 269
>ref|NP_666199.1| casein kinase I isoform alpha [Mus musculus].
Length = 325
Score = 440 bits (1131), Expect = e-124
Identities = 207/268 (77%), Positives = 238/268 (88%)
Frame = +2
Query: 176 ELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQG 355
E VG KY+L RKIGSGSFGDIYL NI +GEEVA+KLE K +HPQL ESK YK++QG
Sbjct: 10 EFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKILQG 69
Query: 356 GVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 535
GVGIP I+W G E DYNV+VM+LLGPSLEDLFNFCSR+F++KTVL+LADQMISRIEY+H+
Sbjct: 70 GVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYVHT 129
Query: 536 KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYAS 715
KNFIHRD+KPDNFLMG+G+ N +++IDFGLAKKYRD RT QHIPYRE+KNLTGTARYAS
Sbjct: 130 KNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARYAS 189
Query: 716 INTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLC 895
IN HLGIEQSRRDD+ESLGYVLMYFN SLPWQGLKAATK+QKYE+ISEKKMSTP+EVLC
Sbjct: 190 INAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATKKQKYEKISEKKMSTPVEVLC 249
Query: 896 KGYPSEFSTYLNFCRSLPFDEQPDYSYL 979
KG+P+EF+ YLN+CR L F+E PDY YL
Sbjct: 250 KGFPAEFAMYLNYCRGLRFEEAPDYMYL 277
>ref|NP_690022.2| casein kinase I isoform gamma-3 [Mus musculus].
Length = 424
Score = 339 bits (870), Expect = 2e-93
Identities = 163/269 (60%), Positives = 211/269 (78%), Gaps = 2/269 (0%)
Frame = +2
Query: 179 LRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQGG 358
L VG +R+G+KIG G+FG++ LG N+ + E VAIKLE +K++ PQLH+E +FYK + G
Sbjct: 37 LMVGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSG 96
Query: 359 VGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK 538
GIP + + G G YN MV+ELLGPSLEDLF+ C R FSLKTVL++A Q+ISR+EY+HSK
Sbjct: 97 DGIPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSK 156
Query: 539 NFIHRDVKPDNFLMGL--GKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 712
N I+RDVKP+NFL+G K +++IIDFGLAK+Y D T +HIPYRE+K+LTGTARY
Sbjct: 157 NLIYRDVKPENFLIGRPGNKAQQVIHIIDFGLAKEYIDPETKKHIPYREHKSLTGTARYM 216
Query: 713 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 892
SINTHLG EQSRRDDLE+LG++ MYF GSLPWQGLKA T +++Y++I + K +TPIEVL
Sbjct: 217 SINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVL 276
Query: 893 CKGYPSEFSTYLNFCRSLPFDEQPDYSYL 979
C+ +P E +TYL + R L F E+PDY YL
Sbjct: 277 CENFPEEMATYLRYVRRLDFFEKPDYDYL 305
>ref|NP_775277.2| casein kinase I isoform gamma-1 [Mus musculus].
Length = 459
Score = 335 bits (859), Expect = 3e-92
Identities = 160/270 (59%), Positives = 212/270 (78%), Gaps = 3/270 (1%)
Frame = +2
Query: 179 LRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMM-QG 355
L VG +R+G+KIG G+FG++ LG N+ + E VAIKLE +K++ PQLH+E +FYK +
Sbjct: 38 LMVGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPIKSRAPQLHLEYRFYKQLGSA 97
Query: 356 GVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 535
G G+P + + G G YN MV+ELLGPSLEDLF+ C R F+LKTVL++A Q++SR+EY+HS
Sbjct: 98 GEGLPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFTLKTVLMIAIQLLSRMEYVHS 157
Query: 536 KNFIHRDVKPDNFLMGL--GKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARY 709
KN I+RDVKP+NFL+G KK ++++IIDFGLAK+Y D T +HIPYRE+K+LTGTARY
Sbjct: 158 KNLIYRDVKPENFLIGRQGNKKEHVIHIIDFGLAKEYVDPETKKHIPYREHKSLTGTARY 217
Query: 710 ASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEV 889
SINTHLG EQSRRDDLE+LG++ MYF GSLPWQGLKA T +++Y++I + K +TPIE
Sbjct: 218 MSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRNTPIEA 277
Query: 890 LCKGYPSEFSTYLNFCRSLPFDEQPDYSYL 979
LC+ +P E +TYL + R L F E+PDY YL
Sbjct: 278 LCENFPEEMATYLRYVRRLDFFEKPDYEYL 307
>ref|NP_001153063.1| casein kinase I isoform gamma-2 isoform 2 [Mus musculus].
Length = 415
Score = 332 bits (851), Expect = 3e-91
Identities = 157/269 (58%), Positives = 211/269 (78%), Gaps = 2/269 (0%)
Frame = +2
Query: 179 LRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQGG 358
L VG +R+G+KIG G+FG++ LG N+ + E VAIKLE +K++ PQLH+E +FYK +
Sbjct: 40 LMVGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPIKSRAPQLHLEYRFYKQLSTT 99
Query: 359 VGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK 538
G+P + + G G YN MV+ELLGPSLEDLF+ C R F+LKTVL++A Q+I+R+EY+H+K
Sbjct: 100 EGVPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFTLKTVLMIAIQLITRMEYVHTK 159
Query: 539 NFIHRDVKPDNFLMGL--GKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 712
+ I+RDVKP+NFL+G K+ + ++IIDFGLAK+Y D T +HIPYRE+K+LTGTARY
Sbjct: 160 SLIYRDVKPENFLVGRPGSKRQHSIHIIDFGLAKEYIDPETKKHIPYREHKSLTGTARYM 219
Query: 713 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 892
SINTHLG EQSRRDDLE+LG++ MYF GSLPWQGLKA T +++Y++I + K +TPIEVL
Sbjct: 220 SINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVL 279
Query: 893 CKGYPSEFSTYLNFCRSLPFDEQPDYSYL 979
C+ +P E +TYL + R L F E+PDY YL
Sbjct: 280 CESFPEEMATYLRYVRRLDFFEKPDYDYL 308
>ref|NP_598763.1| casein kinase I isoform gamma-2 isoform 1 [Mus musculus].
Length = 442
Score = 318 bits (815), Expect = 4e-87
Identities = 157/296 (53%), Positives = 211/296 (71%), Gaps = 29/296 (9%)
Frame = +2
Query: 179 LRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQG- 355
L VG +R+G+KIG G+FG++ LG N+ + E VAIKLE +K++ PQLH+E +FYK +
Sbjct: 40 LMVGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPIKSRAPQLHLEYRFYKQLSTT 99
Query: 356 --------------------------GVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNF 457
G+P + + G G YN MV+ELLGPSLEDLF+
Sbjct: 100 GEADSGTGPALLGQQWLRTPSMDVSFAEGVPQVYYFGPCGKYNAMVLELLGPSLEDLFDL 159
Query: 458 CSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGL--GKKGNLVYIIDFGLA 631
C R F+LKTVL++A Q+I+R+EY+H+K+ I+RDVKP+NFL+G K+ + ++IIDFGLA
Sbjct: 160 CDRTFTLKTVLMIAIQLITRMEYVHTKSLIYRDVKPENFLVGRPGSKRQHSIHIIDFGLA 219
Query: 632 KKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPW 811
K+Y D T +HIPYRE+K+LTGTARY SINTHLG EQSRRDDLE+LG++ MYF GSLPW
Sbjct: 220 KEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPW 279
Query: 812 QGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFSTYLNFCRSLPFDEQPDYSYL 979
QGLKA T +++Y++I + K +TPIEVLC+ +P E +TYL + R L F E+PDY YL
Sbjct: 280 QGLKADTLKERYQKIGDTKRATPIEVLCESFPEEMATYLRYVRRLDFFEKPDYDYL 335
>ref|NP_001156336.1| tau-tubulin kinase 1 [Mus musculus].
Length = 1308
Score = 160 bits (406), Expect = 1e-39
Identities = 100/271 (36%), Positives = 145/271 (53%), Gaps = 6/271 (2%)
Frame = +2
Query: 185 VGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQGGVG 364
V +++++ +KIG G FG+IY ++ + E VA+K+E + L +E K +QG
Sbjct: 30 VKDRWKVLKKIGGGGFGEIYEAMDLLTRENVALKVESAQQPKQVLKMEVAVLKKLQGKDH 89
Query: 365 IPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSR-KFSLKTVLLLADQMISRIEYIHSKN 541
+ CG +N +VM+L G +L DL R F+L T L L Q++ IE IHS
Sbjct: 90 VCRFIGCGRNEKFNYVVMQLQGRNLADLRRSQPRGTFTLSTTLRLGKQILESIEAIHSVG 149
Query: 542 FIHRDVKPDNFLMG-LGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASI 718
F+HRD+KP NF MG L Y++DFGLA++Y + T P R GT RYAS+
Sbjct: 150 FLHRDIKPSNFAMGRLPSTYRKCYMLDFGLARQYTNT-TGDVRPPRNVAGFRGTVRYASV 208
Query: 719 NTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATK----RQKYERISEKKMSTPIE 886
N H E R DDL SL Y+L+ F +G LPW+ +K + ++KYE
Sbjct: 209 NAHKNREMGRHDDLWSLFYMLVEFAVGQLPWRKIKDKEQVGMIKEKYEH----------R 258
Query: 887 VLCKGYPSEFSTYLNFCRSLPFDEQPDYSYL 979
+L K PSEF +L+ SL + +PDY +
Sbjct: 259 MLLKHMPSEFHLFLDHIASLDYFTKPDYQLI 289
>ref|NP_001020028.1| tau-tubulin kinase 2 isoform 2 [Mus musculus].
Length = 1243
Score = 157 bits (398), Expect = 9e-39
Identities = 98/267 (36%), Positives = 143/267 (53%), Gaps = 2/267 (0%)
Frame = +2
Query: 185 VGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQGGVG 364
V ++++ RKIG G FG+IY ++ + E VA+K+E + L +E K +QG
Sbjct: 17 VKERWKVLRKIGGGGFGEIYDALDMLTRENVALKVESAQQPKQVLKMEVAVLKKLQGKDH 76
Query: 365 IPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSR-KFSLKTVLLLADQMISRIEYIHSKN 541
+ CG +N +VM+L G +L DL SR F++ T L L Q++ IE IHS
Sbjct: 77 VCRFIGCGRNDRFNYVVMQLQGRNLADLRRSQSRGTFTISTTLRLGKQILESIESIHSVG 136
Query: 542 FIHRDVKPDNFLMG-LGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASI 718
F+HRD+KP NF MG +++DFGLA+++ ++ P R GT RYASI
Sbjct: 137 FLHRDIKPSNFAMGRFPSTCRKCFMLDFGLARQFTNSCGDVR-PPRAVAGFRGTVRYASI 195
Query: 719 NTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCK 898
N H E R DDL SL Y+L+ F +G LPW+ +K E++ K ++ K
Sbjct: 196 NAHRNREMGRHDDLWSLFYMLVEFVVGQLPWRKIK------DKEQVGSIKERYDHRLMLK 249
Query: 899 GYPSEFSTYLNFCRSLPFDEQPDYSYL 979
P EFST+L+ SL + +PDY L
Sbjct: 250 HLPPEFSTFLDHISSLDYFTKPDYQLL 276
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 26,529,663
Number of extensions: 659066
Number of successful extensions: 3398
Number of sequences better than 1.0e-05: 230
Number of HSP's gapped: 3037
Number of HSP's successfully gapped: 231
Length of query: 326
Length of database: 15,617,559
Length adjustment: 102
Effective length of query: 224
Effective length of database: 12,553,887
Effective search space: 2812070688
Effective search space used: 2812070688
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-001041
(979 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_003355386.1| PREDICTED: casein kinase I isoform epsilon i... 545 e-155
Alignment gi|XP_003126072.1| PREDICTED: casein kinase I isoform epsilon i... 545 e-155
Alignment gi|XP_003124136.1| PREDICTED: casein kinase I isoform alpha iso... 440 e-124
Alignment gi|XP_003354399.1| PREDICTED: casein kinase I isoform alpha [Su... 425 e-119
Alignment gi|XP_003357975.1| PREDICTED: hypothetical protein LOC100625051... 406 e-113
Alignment gi|XP_003123049.1| PREDICTED: casein kinase I isoform gamma-2 [... 310 1e-84
Alignment gi|XP_001927058.3| PREDICTED: casein kinase I isoform gamma-1-l... 275 4e-74
Alignment gi|XP_003123926.2| PREDICTED: casein kinase I isoform gamma-3-l... 262 2e-70
Alignment gi|XP_001929339.2| PREDICTED: tau-tubulin kinase 1 [Sus scrofa]. 160 8e-40
Alignment gi|XP_003353431.1| PREDICTED: tau-tubulin kinase 2 [Sus scrofa]. 156 1e-38
>ref|XP_003355386.1| PREDICTED: casein kinase I isoform epsilon isoform 2 [Sus scrofa].
Length = 416
Score = 545 bits (1404), Expect = e-155
Identities = 266/269 (98%), Positives = 268/269 (99%)
Frame = +2
Query: 173 MELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQ 352
MELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQ
Sbjct: 1 MELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQ 60
Query: 353 GGVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 532
GGVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH
Sbjct: 61 GGVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 120
Query: 533 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 712
SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA
Sbjct: 121 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 180
Query: 713 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 892
SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL
Sbjct: 181 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 240
Query: 893 CKGYPSEFSTYLNFCRSLPFDEQPDYSYL 979
CKGYPSEFSTYLNFCRSL FD++PDYSYL
Sbjct: 241 CKGYPSEFSTYLNFCRSLRFDDKPDYSYL 269
>ref|XP_003126072.1| PREDICTED: casein kinase I isoform epsilon isoform 1 [Sus scrofa].
Length = 416
Score = 545 bits (1404), Expect = e-155
Identities = 266/269 (98%), Positives = 268/269 (99%)
Frame = +2
Query: 173 MELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQ 352
MELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQ
Sbjct: 1 MELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQ 60
Query: 353 GGVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 532
GGVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH
Sbjct: 61 GGVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 120
Query: 533 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 712
SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA
Sbjct: 121 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 180
Query: 713 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 892
SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL
Sbjct: 181 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 240
Query: 893 CKGYPSEFSTYLNFCRSLPFDEQPDYSYL 979
CKGYPSEFSTYLNFCRSL FD++PDYSYL
Sbjct: 241 CKGYPSEFSTYLNFCRSLRFDDKPDYSYL 269
>ref|XP_003124136.1| PREDICTED: casein kinase I isoform alpha isoform 1 [Sus scrofa].
Length = 337
Score = 440 bits (1131), Expect = e-124
Identities = 207/268 (77%), Positives = 238/268 (88%)
Frame = +2
Query: 176 ELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQG 355
E VG KY+L RKIGSGSFGDIYL NI +GEEVA+KLE K +HPQL ESK YK++QG
Sbjct: 10 EFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKILQG 69
Query: 356 GVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 535
GVGIP I+W G E DYNV+VM+LLGPSLEDLFNFCSR+F++KTVL+LADQMISRIEY+H+
Sbjct: 70 GVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYVHT 129
Query: 536 KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYAS 715
KNFIHRD+KPDNFLMG+G+ N +++IDFGLAKKYRD RT QHIPYRE+KNLTGTARYAS
Sbjct: 130 KNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARYAS 189
Query: 716 INTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLC 895
IN HLGIEQSRRDD+ESLGYVLMYFN SLPWQGLKAATK+QKYE+ISEKKMSTP+EVLC
Sbjct: 190 INAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATKKQKYEKISEKKMSTPVEVLC 249
Query: 896 KGYPSEFSTYLNFCRSLPFDEQPDYSYL 979
KG+P+EF+ YLN+CR L F+E PDY YL
Sbjct: 250 KGFPAEFAMYLNYCRGLRFEEAPDYMYL 277
>ref|XP_003354399.1| PREDICTED: casein kinase I isoform alpha [Sus scrofa].
Length = 364
Score = 425 bits (1092), Expect = e-119
Identities = 207/296 (69%), Positives = 238/296 (80%), Gaps = 28/296 (9%)
Frame = +2
Query: 176 ELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQG 355
E VG KY+L RKIGSGSFGDIYL NI +GEEVA+KLE K +HPQL ESK YK++QG
Sbjct: 10 EFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKILQG 69
Query: 356 GVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 535
GVGIP I+W G E DYNV+VM+LLGPSLEDLFNFCSR+F++KTVL+LADQMISRIEY+H+
Sbjct: 70 GVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYVHT 129
Query: 536 KNFIHRDVKPDNFLMGLGKKG----------------------------NLVYIIDFGLA 631
KNFIHRD+KPDNFLMG+G+ N +++IDFGLA
Sbjct: 130 KNFIHRDIKPDNFLMGIGRHCNKCLESPVGKRKRSMTVSTSQDPSFSGLNQLFLIDFGLA 189
Query: 632 KKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPW 811
KKYRD RT QHIPYRE+KNLTGTARYASIN HLGIEQSRRDD+ESLGYVLMYFN SLPW
Sbjct: 190 KKYRDNRTRQHIPYREDKNLTGTARYASINAHLGIEQSRRDDMESLGYVLMYFNRTSLPW 249
Query: 812 QGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFSTYLNFCRSLPFDEQPDYSYL 979
QGLKAATK+QKYE+ISEKKMSTP+EVLCKG+P+EF+ YLN+CR L F+E PDY YL
Sbjct: 250 QGLKAATKKQKYEKISEKKMSTPVEVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYL 305
>ref|XP_003357975.1| PREDICTED: hypothetical protein LOC100625051 [Sus scrofa].
Length = 620
Score = 406 bits (1043), Expect = e-113
Identities = 198/207 (95%), Positives = 204/207 (98%)
Frame = +2
Query: 359 VGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK 538
VGIP+I+WCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK
Sbjct: 36 VGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK 95
Query: 539 NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASI 718
NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASI
Sbjct: 96 NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASI 155
Query: 719 NTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCK 898
NTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEK+MSTPIEVLCK
Sbjct: 156 NTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKEMSTPIEVLCK 215
Query: 899 GYPSEFSTYLNFCRSLPFDEQPDYSYL 979
PSEF+TYLNFCRSL FD++PDYSYL
Sbjct: 216 -LPSEFATYLNFCRSLRFDDKPDYSYL 241
>ref|XP_003123049.1| PREDICTED: casein kinase I isoform gamma-2 [Sus scrofa].
Length = 409
Score = 310 bits (793), Expect = 1e-84
Identities = 148/269 (55%), Positives = 203/269 (75%), Gaps = 2/269 (0%)
Frame = +2
Query: 179 LRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQGG 358
L VG +R+G+KIG G+FG++ LG N+ + E VAIKLE +K++ PQLH+E +FYK +
Sbjct: 39 LMVGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPIKSRAPQLHLEYRFYKQLSAA 98
Query: 359 VGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK 538
G+P + + G G YN MV+ELLGPSLEDLF+ C R F+LKTVL++A Q+I+R+EY+H+K
Sbjct: 99 EGVPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFTLKTVLMIAIQLITRMEYVHTK 158
Query: 539 NFIHRDVKPDNFLMGL--GKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 712
+ I+RDVKP+NFL+G K+ + ++IIDFGLAK+Y D T +HIPYRE+K+LTGTARY
Sbjct: 159 SLIYRDVKPENFLVGRPGTKRQHAIHIIDFGLAKEYIDPETKKHIPYREHKSLTGTARYM 218
Query: 713 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 892
SINTHLG + +L + G + MYF GSLPWQGLKA T +++Y++I + K +TPIEVL
Sbjct: 219 SINTHLG-----KGELHAXGPMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVL 273
Query: 893 CKGYPSEFSTYLNFCRSLPFDEQPDYSYL 979
C+ +P E +TYL + R L F E+PDY YL
Sbjct: 274 CESFPEEMATYLRYVRRLDFFEKPDYDYL 302
>ref|XP_001927058.3| PREDICTED: casein kinase I isoform gamma-1-like [Sus scrofa].
Length = 494
Score = 275 bits (702), Expect = 4e-74
Identities = 129/208 (62%), Positives = 167/208 (80%), Gaps = 2/208 (0%)
Frame = +2
Query: 362 GIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKN 541
G+P + + G G YN MV+ELLGPSLEDLF+ C R F+LKTVL++A Q++SR+EY+HSKN
Sbjct: 128 GLPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFTLKTVLMIAIQLLSRMEYVHSKN 187
Query: 542 FIHRDVKPDNFLMGL--GKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYAS 715
I+RDVKP+NFL+G KK ++++IIDFGLAK+Y D T +HIPYRE+K+LTGTARY S
Sbjct: 188 LIYRDVKPENFLIGRQGNKKEHVIHIIDFGLAKEYIDPETKKHIPYREHKSLTGTARYMS 247
Query: 716 INTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLC 895
INTHLG EQSRRDDLE+LG++ MYF GSLPWQGLKA T +++Y++I + K +TPIE LC
Sbjct: 248 INTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRNTPIEALC 307
Query: 896 KGYPSEFSTYLNFCRSLPFDEQPDYSYL 979
+ +P E +TYL + R L F E+PDY YL
Sbjct: 308 ENFPEEMATYLRYVRRLDFFEKPDYEYL 335
>ref|XP_003123926.2| PREDICTED: casein kinase I isoform gamma-3-like [Sus scrofa].
Length = 311
Score = 262 bits (669), Expect = 2e-70
Identities = 125/192 (65%), Positives = 157/192 (81%), Gaps = 2/192 (1%)
Frame = +2
Query: 410 MVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGL- 586
MV+ELLGPSLEDLF+ C R FSLKTVL++A Q+ISR+EY+HSKN I+RDVKP+NFL+G
Sbjct: 1 MVLELLGPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRP 60
Query: 587 -GKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLE 763
K +++IIDFGLAK+Y D T +HIPYRE+K+LTGTARY SINTHLG EQSRRDDLE
Sbjct: 61 GNKTQQVIHIIDFGLAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLE 120
Query: 764 SLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFSTYLNFCRS 943
+LG++ MYF GSLPWQGLKA T +++Y++I + K +TPIEVLC+ +P E +TYL + R
Sbjct: 121 ALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVLCENFPEEMATYLRYVRR 180
Query: 944 LPFDEQPDYSYL 979
L F E+PDY YL
Sbjct: 181 LDFFEKPDYDYL 192
>ref|XP_001929339.2| PREDICTED: tau-tubulin kinase 1 [Sus scrofa].
Length = 1305
Score = 160 bits (406), Expect = 8e-40
Identities = 100/271 (36%), Positives = 145/271 (53%), Gaps = 6/271 (2%)
Frame = +2
Query: 185 VGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQGGVG 364
V +++++ +KIG G FG+IY ++ + E VA+K+E + L +E K +QG
Sbjct: 30 VKDRWKVLKKIGGGGFGEIYEAMDLLTRENVALKVESAQQPKQVLKMEVAVLKKLQGKDH 89
Query: 365 IPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSR-KFSLKTVLLLADQMISRIEYIHSKN 541
+ CG +N +VM+L G +L DL R F+L T L L Q++ IE IHS
Sbjct: 90 VCRFIGCGRNEKFNYVVMQLQGRNLADLRRSQPRGTFTLSTTLRLGKQILESIEAIHSVG 149
Query: 542 FIHRDVKPDNFLMG-LGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASI 718
F+HRD+KP NF MG L Y++DFGLA++Y + T P R GT RYAS+
Sbjct: 150 FLHRDIKPSNFAMGRLPSTYRKCYMLDFGLARQYTNT-TGDVRPPRNVAGFRGTVRYASV 208
Query: 719 NTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATK----RQKYERISEKKMSTPIE 886
N H E R DDL SL Y+L+ F +G LPW+ +K + ++KYE
Sbjct: 209 NAHKNREMGRHDDLWSLFYMLVEFAVGQLPWRKIKDKEQVGMIKEKYEH----------R 258
Query: 887 VLCKGYPSEFSTYLNFCRSLPFDEQPDYSYL 979
+L K PSEF +L+ SL + +PDY +
Sbjct: 259 MLLKHMPSEFHLFLDHIASLDYFTKPDYQLI 289
>ref|XP_003353431.1| PREDICTED: tau-tubulin kinase 2 [Sus scrofa].
Length = 1243
Score = 156 bits (395), Expect = 1e-38
Identities = 98/267 (36%), Positives = 142/267 (53%), Gaps = 2/267 (0%)
Frame = +2
Query: 185 VGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQGGVG 364
V ++++ RKIG G FG+IY ++ + E VA+K+E + L +E K +QG
Sbjct: 17 VKERWKVLRKIGGGGFGEIYDALDMLTRENVALKVESAQQPKQVLKMEVAVLKKLQGKDH 76
Query: 365 IPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSR-KFSLKTVLLLADQMISRIEYIHSKN 541
+ CG +N +VM+L G +L DL SR F++ T L L Q++ IE IHS
Sbjct: 77 VCRFIGCGRNDRFNYVVMQLQGRNLADLRRSQSRGTFTISTTLRLGRQILESIESIHSVG 136
Query: 542 FIHRDVKPDNFLMG-LGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASI 718
F+HRD+KP NF MG Y++DFGLA+++ ++ P R GT RYASI
Sbjct: 137 FLHRDIKPSNFAMGRFPSTCRKCYMLDFGLARQFTNSCGDVR-PPRAVAGFRGTVRYASI 195
Query: 719 NTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCK 898
N H E R DDL SL Y+L+ F +G LPW+ +K E++ K ++ K
Sbjct: 196 NAHRNREMGRHDDLWSLFYMLVEFVVGQLPWRKIK------DKEQVGSIKERYDHRLMLK 249
Query: 899 GYPSEFSTYLNFCRSLPFDEQPDYSYL 979
P EFS +L+ SL + +PDY L
Sbjct: 250 HLPPEFSIFLDHISSLDYFTKPDYQLL 276
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 20,558,821
Number of extensions: 621243
Number of successful extensions: 2511
Number of sequences better than 1.0e-05: 116
Number of HSP's gapped: 2338
Number of HSP's successfully gapped: 117
Length of query: 326
Length of database: 11,343,932
Length adjustment: 99
Effective length of query: 227
Effective length of database: 8,879,129
Effective search space: 2015562283
Effective search space used: 2015562283
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-001041
(979 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr05 448 e-123
Sscrofa_Chr12 353 1e-94
>Sscrofa_Chr05
|| Length = 111506441
Score = 448 bits (226), Expect = e-123
Identities = 229/230 (99%)
Strand = Plus / Plus
Query: 508 gatcagccgcatcgagtacatccactccaagaacttcatccaccgggacgtcaaacccga 567
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6893186 gatcagccgcatcgagtacatccactccaagaacttcatccaccgggacgtcaaacccga 6893245
Query: 568 caacttcctcatggggctggggaagaagggcaacctggtgtacatcatcgacttcgggct 627
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6893246 caacttcctcatgggactggggaagaagggcaacctggtgtacatcatcgacttcgggct 6893305
Query: 628 ggccaagaagtaccgggacgcccgcacccaccagcacatcccctaccgggaaaacaagaa 687
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6893306 ggccaagaagtaccgggacgcccgcacccaccagcacatcccctaccgggaaaacaagaa 6893365
Query: 688 cttgaccggcacggcccgctacgcctccatcaacacccacctgggcatcg 737
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6893366 cttgaccggcacggcccgctacgcctccatcaacacccacctgggcatcg 6893415
Score = 345 bits (174), Expect = 3e-92
Identities = 177/178 (99%)
Strand = Plus / Plus
Query: 737 gagcaaagccgtcgagatgacctggagagtctgggttacgtgctcatgtacttcaacctg 796
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6894047 gagcaaagccgtcgagatgacctggagagtctgggttacgtgctcatgtacttcaacctg 6894106
Query: 797 ggctccctgccctggcagggcctcaaggcggccaccaagcgccagaagtatgagcgcatc 856
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6894107 ggctccctgccctggcagggcctcaaggcggccaccaagcgccagaagtatgagcgcatc 6894166
Query: 857 agcgagaagaagatgtcgacgcccatcgaggtcctctgcaaaggctacccctctgagt 914
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 6894167 agcgagaagaagatgtcgacgcccatcgaggtcctctgcaaaggctacccctgtgagt 6894224
Score = 299 bits (151), Expect = 1e-78
Identities = 151/151 (100%)
Strand = Plus / Plus
Query: 358 agtgggaatcccgtccatcaagtggtgcggggccgagggtgactacaacgtgatggtcat 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6890394 agtgggaatcccgtccatcaagtggtgcggggccgagggtgactacaacgtgatggtcat 6890453
Query: 418 ggagttgctggggcccagcctcgaggacctcttcaacttctgctcccgaaagtttagcct 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6890454 ggagttgctggggcccagcctcgaggacctcttcaacttctgctcccgaaagtttagcct 6890513
Query: 478 caagacggtgctgctcctggcggaccagatg 508
|||||||||||||||||||||||||||||||
Sbjct: 6890514 caagacggtgctgctcctggcggaccagatg 6890544
Score = 222 bits (112), Expect = 3e-55
Identities = 112/112 (100%)
Strand = Plus / Plus
Query: 248 ggtgccaacattgcctctggtgaagaagttgctatcaagctcgagtgtgtgaagacaaag 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6890150 ggtgccaacattgcctctggtgaagaagttgctatcaagctcgagtgtgtgaagacaaag 6890209
Query: 308 cacccccagctgcacatcgagagcaagttctacaagatgatgcaggggggag 359
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6890210 cacccccagctgcacatcgagagcaagttctacaagatgatgcaggggggag 6890261
Score = 182 bits (92), Expect = 2e-43
Identities = 92/92 (100%)
Strand = Plus / Plus
Query: 160 gcaggagtgaaccatggagcttcgtgtggggaacaagtaccgcctgggccggaagatcgg 219
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6880890 gcaggagtgaaccatggagcttcgtgtggggaacaagtaccgcctgggccggaagatcgg 6880949
Query: 220 gagcggatcctttggagatatctacctgggtg 251
||||||||||||||||||||||||||||||||
Sbjct: 6880950 gagcggatcctttggagatatctacctgggtg 6880981
Score = 109 bits (55), Expect = 3e-21
Identities = 67/71 (94%)
Strand = Plus / Plus
Query: 909 ctgagttctcaacatacctcaacttctgccgttcactgccgttcgatgaacagcctgatt 968
||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| |
Sbjct: 6895555 ctgagttctcaacatacctcaacttctgccgttcactgcggttcgatgacaagcctgact 6895614
Query: 969 actcctacctg 979
|||||||||||
Sbjct: 6895615 actcctacctg 6895625
>Sscrofa_Chr12
|| Length = 63588571
Score = 353 bits (178), Expect = 1e-94
Identities = 217/230 (94%)
Strand = Plus / Minus
Query: 508 gatcagccgcatcgagtacatccactccaagaacttcatccaccgggacgtcaaacccga 567
||||||||||||||||||||||||||| ||||||||||||||||||||||| || || ||
Sbjct: 977279 gatcagccgcatcgagtacatccactcgaagaacttcatccaccgggacgtgaagccgga 977220
Query: 568 caacttcctcatggggctggggaagaagggcaacctggtgtacatcatcgacttcgggct 627
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 977219 caacttcctcatggggctgggcaagaagggcaacctggtgtacatcatcgacttcgggct 977160
Query: 628 ggccaagaagtaccgggacgcccgcacccaccagcacatcccctaccgggaaaacaagaa 687
|||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct: 977159 ggccaagaagtaccgggacgcccgcacccaccagcacatcccctaccgcgagaacaagaa 977100
Query: 688 cttgaccggcacggcccgctacgcctccatcaacacccacctgggcatcg 737
| | |||||||| || |||||||||||||||||||| ||||| |||||||
Sbjct: 977099 cctcaccggcaccgcgcgctacgcctccatcaacacgcacctcggcatcg 977050
Score = 206 bits (104), Expect = 2e-50
Identities = 125/132 (94%)
Strand = Plus / Minus
Query: 766 tctgggttacgtgctcatgtacttcaacctgggctccctgccctggcagggcctcaaggc 825
|||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||||
Sbjct: 976835 tctgggctacgtgctcatgtacttcaacctgggctcgctgccctggcagggcctgaaggc 976776
Query: 826 ggccaccaagcgccagaagtatgagcgcatcagcgagaagaagatgtcgacgcccatcga 885
||||||||||||||||||||| |||||||||||||||||| ||||||| |||||||||||
Sbjct: 976775 ggccaccaagcgccagaagtacgagcgcatcagcgagaaggagatgtccacgcccatcga 976716
Query: 886 ggtcctctgcaa 897
||| ||||||||
Sbjct: 976715 ggtgctctgcaa 976704
Score = 157 bits (79), Expect = 1e-35
Identities = 133/151 (88%)
Strand = Plus / Minus
Query: 358 agtgggaatcccgtccatcaagtggtgcggggccgagggtgactacaacgtgatggtcat 417
|||||| ||||| ||||| |||||| ||||||||||| ||||||||||| ||||||||
Sbjct: 977841 agtgggcatccccaccatccggtggtgtggggccgagggcgactacaacgtcatggtcat 977782
Query: 418 ggagttgctggggcccagcctcgaggacctcttcaacttctgctcccgaaagtttagcct 477
|||| |||||||||||||||| |||||||||||||||||||||||| | ||||| |||||
Sbjct: 977781 ggagctgctggggcccagcctggaggacctcttcaacttctgctccaggaagttcagcct 977722
Query: 478 caagacggtgctgctcctggcggaccagatg 508
|||||| || ||||| || || |||||||||
Sbjct: 977721 caagaccgtcctgctgctcgctgaccagatg 977691
Score = 93.7 bits (47), Expect = 2e-16
Identities = 80/91 (87%)
Strand = Plus / Plus
Query: 269 gaagaagttgctatcaagctcgagtgtgtgaagacaaagcacccccagctgcacatcgag 328
||||||||||| |||||||| || ||||| || || |||||||| ||||| |||||||||
Sbjct: 894976 gaagaagttgccatcaagcttgaatgtgtcaaaactaagcaccctcagctccacatcgag 895035
Query: 329 agcaagttctacaagatgatgcaggggggag 359
||||| ||||||||||||||||||| ||||
Sbjct: 895036 agcaaaatctacaagatgatgcagggaggag 895066
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 18,176,024
Number of extensions: 109
Number of successful extensions: 109
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 109
Number of HSP's successfully gapped: 10
Length of query: 979
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 958
Effective length of database: 2,808,413,156
Effective search space: 2690459803448
Effective search space used: 2690459803448
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 29 (58.0 bits)