Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-001103
(1767 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_776770.2| heat shock cognate 71 kDa protein [Bos taurus]. 815 0.0
Alignment gi|NP_776975.1| heat shock 70 kDa protein 1A [Bos taurus]. 724 0.0
Alignment gi|NP_976067.2| heat shock 70 kDa protein 1B [Bos taurus]. 723 0.0
Alignment gi|NP_001161367.1| heat shock 70 kDa protein 1-like [Bos taurus]. 717 0.0
Alignment gi|NP_776769.1| heat shock-related 70 kDa protein 2 [Bos taurus]. 706 0.0
Alignment gi|XP_002685896.1| PREDICTED: heat shock protein 70-like [Bos t... 674 0.0
Alignment gi|XP_589747.1| PREDICTED: heat shock protein 70-like [Bos taur... 674 0.0
Alignment gi|NP_001068616.1| 78 kDa glucose-regulated protein precursor [... 525 e-149
Alignment gi|NP_001029696.1| stress-70 protein, mitochondrial precursor [... 363 e-100
Alignment gi|NP_001039853.1| heat shock 70 kDa protein 14 [Bos taurus]. 180 3e-45
>ref|NP_776770.2| heat shock cognate 71 kDa protein [Bos taurus].
Length = 650
Score = 815 bits (2105), Expect = 0.0
Identities = 422/459 (91%), Positives = 422/459 (91%)
Frame = +1
Query: 1 QRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFGVSILTIE 180
QRQATKDAGTIAGLNVLRIINEPTAA IAYGLDKKVGAERNVLIFDLGGGTF VSILTIE
Sbjct: 154 QRQATKDAGTIAGLNVLRIINEPTAATIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIE 213
Query: 181 DGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRT 360
DGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRT
Sbjct: 214 DGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRT 273
Query: 361 LSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHD 540
LSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHD
Sbjct: 274 LSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHD 333
Query: 541 IVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILSGDKSENVQDXXX 720
IVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDE ILSGDKSENVQD
Sbjct: 334 IVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLL 393
Query: 721 XXXXXXXXGIETAGGVMTVLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKDN 900
GIETAGGVMTVLIKRN YSDNQPGVLIQVYEGERAMTKDN
Sbjct: 394 LDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDN 453
Query: 901 NLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKE 1080
NLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKE
Sbjct: 454 NLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKE 513
Query: 1081 DIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDK 1260
DIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDK
Sbjct: 514 DIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDK 573
Query: 1261 CNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQ 1377
CNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQ
Sbjct: 574 CNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQ 612
>ref|NP_776975.1| heat shock 70 kDa protein 1A [Bos taurus].
Length = 641
Score = 724 bits (1869), Expect = 0.0
Identities = 364/459 (79%), Positives = 403/459 (87%)
Frame = +1
Query: 1 QRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFGVSILTIE 180
QRQATKDAG IAGLNVLRIINEPTAAAIAYGLD+ ERNVLIFDLGGGTF VSILTI+
Sbjct: 154 QRQATKDAGVIAGLNVLRIINEPTAAAIAYGLDRTGKGERNVLIFDLGGGTFDVSILTID 213
Query: 181 DGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRT 360
DGIFEVK+TAGDTHLGGEDFDNR+VNHF+ EFKRKHKKDIS+NKRAVRRLRTACERAKRT
Sbjct: 214 DGIFEVKATAGDTHLGGEDFDNRLVNHFVEEFKRKHKKDISQNKRAVRRLRTACERAKRT 273
Query: 361 LSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHD 540
LSSSTQAS+EIDSL+EGIDFYTSITRARFEEL +DLFR TL+PVEKALRDAKLDK+QIHD
Sbjct: 274 LSSSTQASLEIDSLFEGIDFYTSITRARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHD 333
Query: 541 IVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILSGDKSENVQDXXX 720
+VLVGGSTRIPK+QKLLQDFFNG++LNKSINPDE IL GDKSENVQD
Sbjct: 334 LVLVGGSTRIPKVQKLLQDFFNGRDLNKSINPDEAVAYGAAVQAAILMGDKSENVQDLLL 393
Query: 721 XXXXXXXXGIETAGGVMTVLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKDN 900
G+ETAGGVMT LIKRN YSDNQPGVLIQVYEGERAMT+DN
Sbjct: 394 LDVAPLSLGLETAGGVMTALIKRNSTIPTKQTQIFTTYSDNQPGVLIQVYEGERAMTRDN 453
Query: 901 NLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKE 1080
NLLG+FEL+GIPPAPRGVPQIEVTFDIDANGILNV+A DKSTGK NKITITNDKGRLSKE
Sbjct: 454 NLLGRFELSGIPPAPRGVPQIEVTFDIDANGILNVTATDKSTGKANKITITNDKGRLSKE 513
Query: 1081 DIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDK 1260
+IERMVQEAEKYKAEDE QR++VS+KN+LESYAFNMK+ VEDE L+GKI++ DK+K+LDK
Sbjct: 514 EIERMVQEAEKYKAEDEVQRERVSAKNALESYAFNMKSAVEDEGLKGKISEADKKKVLDK 573
Query: 1261 CNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQ 1377
C E+I+WLD N AEK+EFEH++KELE+VCNPII++LYQ
Sbjct: 574 CQEVISWLDANTLAEKDEFEHKRKELEQVCNPIISRLYQ 612
>ref|NP_976067.2| heat shock 70 kDa protein 1B [Bos taurus].
Length = 641
Score = 723 bits (1865), Expect = 0.0
Identities = 363/459 (79%), Positives = 402/459 (87%)
Frame = +1
Query: 1 QRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFGVSILTIE 180
QRQATKDAG IAGLNVLRIINEPTAAAI YGLD+ ERNVLIFDLGGGTF VSILTI+
Sbjct: 154 QRQATKDAGVIAGLNVLRIINEPTAAAITYGLDRTGKGERNVLIFDLGGGTFDVSILTID 213
Query: 181 DGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRT 360
DGIFEVK+TAGDTHLGGEDFDNR+VNHF+ EFKRKHKKDIS+NKRAVRRLRTACERAKRT
Sbjct: 214 DGIFEVKATAGDTHLGGEDFDNRLVNHFVEEFKRKHKKDISQNKRAVRRLRTACERAKRT 273
Query: 361 LSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHD 540
LSSSTQAS+EIDSL+EGIDFYTSITRARFEEL +DLFR TL+PVEKALRDAKLDK+QIHD
Sbjct: 274 LSSSTQASLEIDSLFEGIDFYTSITRARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHD 333
Query: 541 IVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILSGDKSENVQDXXX 720
+VLVGGSTRIPK+QKLLQDFFNG++LNKSINPDE IL GDKSENVQD
Sbjct: 334 LVLVGGSTRIPKVQKLLQDFFNGRDLNKSINPDEAVAYGAAVQAAILMGDKSENVQDLLL 393
Query: 721 XXXXXXXXGIETAGGVMTVLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKDN 900
G+ETAGGVMT LIKRN YSDNQPGVLIQVYEGERAMT+DN
Sbjct: 394 LDVAPLSLGLETAGGVMTALIKRNSTIPTKQTQIFTTYSDNQPGVLIQVYEGERAMTRDN 453
Query: 901 NLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKE 1080
NLLG+FEL+GIPPAPRGVPQIEVTFDIDANGILNV+A DKSTGK NKITITNDKGRLSKE
Sbjct: 454 NLLGRFELSGIPPAPRGVPQIEVTFDIDANGILNVTATDKSTGKANKITITNDKGRLSKE 513
Query: 1081 DIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDK 1260
+IERMVQEAEKYKAEDE QR++VS+KN+LESYAFNMK+ VEDE L+GKI++ DK+K+LDK
Sbjct: 514 EIERMVQEAEKYKAEDEVQRERVSAKNALESYAFNMKSAVEDEGLKGKISEADKKKVLDK 573
Query: 1261 CNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQ 1377
C E+I+WLD N AEK+EFEH++KELE+VCNPII++LYQ
Sbjct: 574 CQEVISWLDANTLAEKDEFEHKRKELEQVCNPIISRLYQ 612
>ref|NP_001161367.1| heat shock 70 kDa protein 1-like [Bos taurus].
Length = 641
Score = 717 bits (1851), Expect = 0.0
Identities = 359/459 (78%), Positives = 403/459 (87%)
Frame = +1
Query: 1 QRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFGVSILTIE 180
QRQATKDAG IAGLNVLRIINEPTAAAIAYGLDK ER+VLIFDLGGGTF VS+LTI+
Sbjct: 156 QRQATKDAGVIAGLNVLRIINEPTAAAIAYGLDKAGQGERHVLIFDLGGGTFDVSVLTID 215
Query: 181 DGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRT 360
DGIFEVK+TAGDTHLGGEDFDNR+V+HF+ EFKRKHKKDIS+NKRAVRRLRTACERAKRT
Sbjct: 216 DGIFEVKATAGDTHLGGEDFDNRLVSHFVEEFKRKHKKDISQNKRAVRRLRTACERAKRT 275
Query: 361 LSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHD 540
LSSSTQA++EIDSLYEGIDFYTSITRARFEEL ADLFRGTL+PVEKALRDAK+DK++IHD
Sbjct: 276 LSSSTQANLEIDSLYEGIDFYTSITRARFEELCADLFRGTLEPVEKALRDAKMDKAKIHD 335
Query: 541 IVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILSGDKSENVQDXXX 720
IVLVGGSTRIPK+Q+LLQD+FNG++LNKSINPDE IL GDKSE VQD
Sbjct: 336 IVLVGGSTRIPKVQRLLQDYFNGRDLNKSINPDEAVAYGAAVQAAILMGDKSEKVQDLLL 395
Query: 721 XXXXXXXXGIETAGGVMTVLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKDN 900
G+ETAGGVMTVLIKRN YSDNQPGVLIQVYEGERAMT+DN
Sbjct: 396 LDVAPLSLGLETAGGVMTVLIKRNSTIPTKQTQIFTTYSDNQPGVLIQVYEGERAMTRDN 455
Query: 901 NLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKE 1080
NLLG+F+LTGIPPAPRGVPQIEVTFDIDANGILNV+A+DKSTGK NKITITNDKGRLSKE
Sbjct: 456 NLLGRFDLTGIPPAPRGVPQIEVTFDIDANGILNVTAMDKSTGKANKITITNDKGRLSKE 515
Query: 1081 DIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDK 1260
+IERMV +AEKYKAEDE QR+K+++KN+LESYAFNMK+ V DE LQGKI++ DK+KIL K
Sbjct: 516 EIERMVLDAEKYKAEDEVQREKIAAKNALESYAFNMKSAVSDEGLQGKISESDKKKILSK 575
Query: 1261 CNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQ 1377
CNE++ WL+ NQ AEK+EF+H++KELE+VCNPIITKLYQ
Sbjct: 576 CNEVLLWLEANQLAEKDEFDHKRKELEQVCNPIITKLYQ 614
>ref|NP_776769.1| heat shock-related 70 kDa protein 2 [Bos taurus].
Length = 631
Score = 706 bits (1823), Expect = 0.0
Identities = 364/461 (78%), Positives = 394/461 (85%), Gaps = 2/461 (0%)
Frame = +1
Query: 1 QRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKK--VGAERNVLIFDLGGGTFGVSILT 174
QRQATKDAGTI GLNVLRIINEPTAAAIAYGLDKK G E+NVLIFDLGGGTF VSILT
Sbjct: 155 QRQATKDAGTITGLNVLRIINEPTAAAIAYGLDKKGCAGGEKNVLIFDLGGGTFDVSILT 214
Query: 175 IEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAK 354
IEDGIFEVKSTAGDTHLGGEDFDNRMV+H+ EFKRKHKKDI A RLRTACERAK
Sbjct: 215 IEDGIFEVKSTAGDTHLGGEDFDNRMVSHWAEEFKRKHKKDI-----APARLRTACERAK 269
Query: 355 RTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQI 534
RTLSSSTQASIEIDSLYEG+DFYTSITRARFEELNADLFR L+PVEKALRDAKLDK QI
Sbjct: 270 RTLSSSTQASIEIDSLYEGVDFYTSITRARFEELNADLFRVPLEPVEKALRDAKLDKGQI 329
Query: 535 HDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILSGDKSENVQDX 714
+IVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDE IL GDKSENVQD
Sbjct: 330 QEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILIGDKSENVQDL 389
Query: 715 XXXXXXXXXXGIETAGGVMTVLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTK 894
GIETAGGVMT LIKRN YSDNQ VL+QVYEGERAMTK
Sbjct: 390 LLLDVTPLSLGIETAGGVMTPLIKRNTTIPTKQTQTFTTYSDNQSSVLVQVYEGERAMTK 449
Query: 895 DNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLS 1074
DNNLLGKF+LTGIPPAPRGVPQIEVTFDIDANGILNV+A DKSTGKENKITITNDKG LS
Sbjct: 450 DNNLLGKFDLTGIPPAPRGVPQIEVTFDIDANGILNVTAADKSTGKENKITITNDKGCLS 509
Query: 1075 KEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKIL 1254
K+DI+RMVQEAE+YK+EDE RD+V++KN++ESY +N+K TVEDEKL+GKI+D+DK KIL
Sbjct: 510 KDDIDRMVQEAERYKSEDEANRDRVAAKNAVESYTYNIKQTVEDEKLRGKISDQDKNKIL 569
Query: 1255 DKCNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQ 1377
DKC E+INWLD+NQ AEK+E+EH+QKELE+VCNPII+KLYQ
Sbjct: 570 DKCQEVINWLDRNQMAEKDEYEHKQKELERVCNPIISKLYQ 610
>ref|XP_002685896.1| PREDICTED: heat shock protein 70-like [Bos taurus].
Length = 643
Score = 674 bits (1738), Expect = 0.0
Identities = 331/458 (72%), Positives = 392/458 (85%)
Frame = +1
Query: 1 QRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFGVSILTIE 180
QRQATKDAG IAGLNVLRIINEPTAAAIAYGLD+ ERNVLIFDLGGGTF VS+LTI+
Sbjct: 156 QRQATKDAGAIAGLNVLRIINEPTAAAIAYGLDRLGAGERNVLIFDLGGGTFDVSVLTID 215
Query: 181 DGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRT 360
G+FEVK+TAGDTHLGGEDFDNR+VNHF+ EF+RKH KD+S NKRA+RRLRTACERAKRT
Sbjct: 216 AGVFEVKATAGDTHLGGEDFDNRLVNHFMEEFRRKHGKDLSRNKRALRRLRTACERAKRT 275
Query: 361 LSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHD 540
LSSSTQA++EIDSL+EG+DFYTSITRARFEEL +DLFR TL+PVEKALRDAKL K+QIHD
Sbjct: 276 LSSSTQATLEIDSLFEGVDFYTSITRARFEELCSDLFRSTLEPVEKALRDAKLGKAQIHD 335
Query: 541 IVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILSGDKSENVQDXXX 720
IVLVGGSTRIPK+QKLLQDFF+G+ELNKSINPDE +L GD E VQD
Sbjct: 336 IVLVGGSTRIPKVQKLLQDFFDGRELNKSINPDEAVAYGAAVQAAVLMGDTCEKVQDLLL 395
Query: 721 XXXXXXXXGIETAGGVMTVLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKDN 900
G+ETAGGVMT LI+RN YSDNQPGVLIQVYEGERAMT+DN
Sbjct: 396 LDVAPLSLGLETAGGVMTTLIQRNATIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTRDN 455
Query: 901 NLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKE 1080
NLLG+FEL+GIPPAPRGVPQIEVTFDIDANGIL+V+A D+STGK NKITITNDKGRLSKE
Sbjct: 456 NLLGRFELSGIPPAPRGVPQIEVTFDIDANGILSVTATDRSTGKANKITITNDKGRLSKE 515
Query: 1081 DIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDK 1260
++ERMV+EAE+YKAEDE QRD+V++KNSLE+Y F++K+++++E+L+ KI +ED++K+ DK
Sbjct: 516 EVERMVREAEQYKAEDEAQRDRVAAKNSLEAYVFHVKSSLQEERLRDKIPEEDRRKVQDK 575
Query: 1261 CNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLY 1374
C E++ WL+ NQ A+KEE+EHQ++ELE++C PI ++LY
Sbjct: 576 CQEVLAWLEHNQLADKEEYEHQKRELEQICCPIFSRLY 613
>ref|XP_589747.1| PREDICTED: heat shock protein 70-like [Bos taurus].
Length = 643
Score = 674 bits (1738), Expect = 0.0
Identities = 331/458 (72%), Positives = 392/458 (85%)
Frame = +1
Query: 1 QRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFGVSILTIE 180
QRQATKDAG IAGLNVLRIINEPTAAAIAYGLD+ ERNVLIFDLGGGTF VS+LTI+
Sbjct: 156 QRQATKDAGAIAGLNVLRIINEPTAAAIAYGLDRLGAGERNVLIFDLGGGTFDVSVLTID 215
Query: 181 DGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRT 360
G+FEVK+TAGDTHLGGEDFDNR+VNHF+ EF+RKH KD+S NKRA+RRLRTACERAKRT
Sbjct: 216 AGVFEVKATAGDTHLGGEDFDNRLVNHFMEEFRRKHGKDLSRNKRALRRLRTACERAKRT 275
Query: 361 LSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHD 540
LSSSTQA++EIDSL+EG+DFYTSITRARFEEL +DLFR TL+PVEKALRDAKL K+QIHD
Sbjct: 276 LSSSTQATLEIDSLFEGVDFYTSITRARFEELCSDLFRSTLEPVEKALRDAKLGKAQIHD 335
Query: 541 IVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILSGDKSENVQDXXX 720
IVLVGGSTRIPK+QKLLQDFF+G+ELNKSINPDE +L GD E VQD
Sbjct: 336 IVLVGGSTRIPKVQKLLQDFFDGRELNKSINPDEAVAYGAAVQAAVLMGDTCEKVQDLLL 395
Query: 721 XXXXXXXXGIETAGGVMTVLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKDN 900
G+ETAGGVMT LI+RN YSDNQPGVLIQVYEGERAMT+DN
Sbjct: 396 LDVAPLSLGLETAGGVMTTLIQRNATIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTRDN 455
Query: 901 NLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKE 1080
NLLG+FEL+GIPPAPRGVPQIEVTFDIDANGIL+V+A D+STGK NKITITNDKGRLSKE
Sbjct: 456 NLLGRFELSGIPPAPRGVPQIEVTFDIDANGILSVTATDRSTGKANKITITNDKGRLSKE 515
Query: 1081 DIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDK 1260
++ERMV+EAE+YKAEDE QRD+V++KNSLE+Y F++K+++++E+L+ KI +ED++K+ DK
Sbjct: 516 EVERMVREAEQYKAEDEAQRDRVAAKNSLEAYVFHVKSSLQEERLRDKIPEEDRRKVQDK 575
Query: 1261 CNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLY 1374
C E++ WL+ NQ A+KEE+EHQ++ELE++C PI ++LY
Sbjct: 576 CQEVLAWLEHNQLADKEEYEHQKRELEQICCPIFSRLY 613
>ref|NP_001068616.1| 78 kDa glucose-regulated protein precursor [Bos taurus].
Length = 655
Score = 525 bits (1351), Expect = e-149
Identities = 270/459 (58%), Positives = 344/459 (74%), Gaps = 1/459 (0%)
Frame = +1
Query: 1 QRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFGVSILTIE 180
QRQATKDAGTIAGLNV+RIINEPTAAAIAYGLDK+ G E+N+L+FDLGGGTF VS+LTI+
Sbjct: 181 QRQATKDAGTIAGLNVMRIINEPTAAAIAYGLDKREG-EKNILVFDLGGGTFDVSLLTID 239
Query: 181 DGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRT 360
+G+FEV +T GDTHLGGEDFD R++ HFI +K+K KD+ ++ RAV++LR E+AKR
Sbjct: 240 NGVFEVVATNGDTHLGGEDFDQRVMEHFIKLYKKKTGKDVRKDNRAVQKLRREVEKAKRA 299
Query: 361 LSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHD 540
LSS QA IEI+S YEG DF ++TRA+FEELN DLFR T+ PV+K L D+ L KS I +
Sbjct: 300 LSSQHQARIEIESFYEGEDFSETLTRAKFEELNMDLFRSTMKPVQKVLEDSDLKKSDIDE 359
Query: 541 IVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILSGDKSENVQDXXX 720
IVLVGGSTRIPKIQ+L+++FFNGKE ++ INPDE +LSGD ++ D
Sbjct: 360 IVLVGGSTRIPKIQQLVKEFFNGKEPSRGINPDEAVAYGAAVQAGVLSGD--QDTGDLVL 417
Query: 721 XXXXXXXXGIETAGGVMTVLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKDN 900
GIET GGVMT LI RN SDNQP V I+VYEGER +TKDN
Sbjct: 418 LDVCPLTLGIETVGGVMTKLIPRNTVVPTKKSQIFSTASDNQPTVTIKVYEGERPLTKDN 477
Query: 901 NLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKE 1080
+LLG F+LTGIPPAPRGVPQIEVTF+ID NGIL V+A DK TG +NKITITND+ RL+ E
Sbjct: 478 HLLGTFDLTGIPPAPRGVPQIEVTFEIDVNGILRVTAEDKGTGNKNKITITNDQNRLTPE 537
Query: 1081 DIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVED-EKLQGKINDEDKQKILD 1257
+IERMV +AEK+ ED+K ++++ ++N LESYA+++K + D EKL GK++ EDK+ +
Sbjct: 538 EIERMVNDAEKFAEEDKKLKERIDTRNELESYAYSLKNQIGDKEKLGGKLSSEDKETMEK 597
Query: 1258 KCNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLY 1374
E I WL+ +Q A+ E+F+ ++KELE++ PII+KLY
Sbjct: 598 AVEEKIEWLESHQDADIEDFKAKKKELEEIVQPIISKLY 636
>ref|NP_001029696.1| stress-70 protein, mitochondrial precursor [Bos taurus].
Length = 679
Score = 363 bits (932), Expect = e-100
Identities = 205/463 (44%), Positives = 286/463 (61%), Gaps = 4/463 (0%)
Frame = +1
Query: 1 QRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFGVSILTIE 180
QRQATKDAG I+GLNVLR+INEPTAAA+AYGLDK ++ + ++DLGGGTF +SIL I+
Sbjct: 201 QRQATKDAGQISGLNVLRVINEPTAAALAYGLDKS--EDKIIAVYDLGGGTFDISILEIQ 258
Query: 181 DGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRT 360
G+FEVKST GDT LGGEDFD ++ H + EFKR+ D++++ A++R+R A E+AK
Sbjct: 259 KGVFEVKSTNGDTFLGGEDFDQALLRHIVKEFKRETGVDLTKDNMALQRVREAAEKAKCE 318
Query: 361 LSSSTQASIEIDSLYEGID----FYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKS 528
LSSS Q I + L +TRA+FE + DL R T+ P +KA++DA++ KS
Sbjct: 319 LSSSVQTDINLPYLTMDASGPKHLNMKLTRAQFEGIVTDLIRRTIAPCQKAMQDAEVSKS 378
Query: 529 QIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILSGDKSENVQ 708
I +++LVGG TR+PK+Q+ +QD F G+ +K++NPDE +L+GD V
Sbjct: 379 DIGEVILVGGMTRMPKVQQTVQDLF-GRAPSKAVNPDEAVAIGAAIQGGVLAGD----VT 433
Query: 709 DXXXXXXXXXXXGIETAGGVMTVLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAM 888
D GIET GGV T LI RN +D Q V I+V +GER M
Sbjct: 434 DVLLLDVTPLSLGIETLGGVFTKLINRNTTIPTKKSQVFSTAADGQTQVEIKVCQGEREM 493
Query: 889 TKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGR 1068
DN LLG+F L GIPPAPRGVPQIEVTFDIDANGI++VSA DK TG+E +I I G
Sbjct: 494 AGDNKLLGQFTLIGIPPAPRGVPQIEVTFDIDANGIVHVSAKDKGTGREQQIVI-QSSGG 552
Query: 1069 LSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQK 1248
LSK+DIE MV+ AEKY ED +++++V + N E + + +E+ K Q + ++ K
Sbjct: 553 LSKDDIENMVKNAEKYAEEDRRKKERVEAVNMAEGIIHDTETKMEEFKDQ--LPADECNK 610
Query: 1249 ILDKCNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQ 1377
+ ++ +++ L + + E L++ + Y+
Sbjct: 611 LKEEISKMRELLARKDSETGENIRQAASSLQQASLKLFEMAYK 653
>ref|NP_001039853.1| heat shock 70 kDa protein 14 [Bos taurus].
Length = 509
Score = 180 bits (457), Expect = 3e-45
Identities = 111/356 (31%), Positives = 182/356 (51%), Gaps = 6/356 (1%)
Frame = +1
Query: 1 QRQATKDAGTIAGLNVLRIINEPTAAAIAYGL--DKKVGAERNVLIFDLGGGTFGVSILT 174
Q+ A +A AG NVLR+I+EP+AA +AYG+ D G + N+L+F LGG + +S++
Sbjct: 151 QKSALGEAARAAGFNVLRLIHEPSAALLAYGIGQDSPTG-KSNILVFKLGGTSLSISVME 209
Query: 175 IEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAK 354
+ GI+ V ST D ++GG F + + +EF+R + D+ N RA+ +L + AK
Sbjct: 210 VNSGIYRVLSTNTDNNIGGTHFTETLAQYLASEFQRSFRHDVRGNARAMMKLMNGADTAK 269
Query: 355 RTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQI 534
+LS+ A+ +DSLYEG DF +++RARFE L + LF ++ + + L + I
Sbjct: 270 HSLSTLGSANCFLDSLYEGQDFDCNVSRARFELLCSPLFNKCIEAIREVLEQSGFTADDI 329
Query: 535 HDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILSGDKSENVQD- 711
+ +VL GGS+RIP++Q++++D F EL SI PDE IL G +S +V+D
Sbjct: 330 NKVVLCGGSSRIPRLQQMIRDLFPAVELLNSIPPDEVIPIGAAIEAGILIGKESLSVEDA 389
Query: 712 --XXXXXXXXXXXGIETAGGVMTVLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGE-R 882
G++ +G ++ + + V +++YE E +
Sbjct: 390 LQIECSAKDILVKGVDESGANSFKVLFPSGTPLPARRQHTLQAPGSISSVCLELYESEGK 449
Query: 883 AMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITI 1050
K N + L + G+ I + +G L+V+ D+ TGK ITI
Sbjct: 450 NSAKVENKFAQVVLQDLDKKENGLRDILAVLTMKRDGSLHVTCTDQETGKCEAITI 505
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 57,498,770
Number of extensions: 1516105
Number of successful extensions: 5593
Number of sequences better than 1.0e-05: 19
Number of HSP's gapped: 5511
Number of HSP's successfully gapped: 22
Length of query: 589
Length of database: 17,681,374
Length adjustment: 108
Effective length of query: 481
Effective length of database: 14,107,870
Effective search space: 6785885470
Effective search space used: 6785885470
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-001103
(1767 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_536543.1| PREDICTED: similar to Heat shock cognate 71 kDa... 817 0.0
Alignment gi|XP_851030.1| PREDICTED: similar to Heat shock cognate 71 kDa... 785 0.0
Alignment gi|XP_859472.1| PREDICTED: similar to Heat shock cognate 71 kDa... 746 0.0
Alignment gi|XP_848246.1| PREDICTED: similar to Heat shock cognate 71 kDa... 737 0.0
Alignment gi|XP_866274.1| PREDICTED: similar to heat shock protein 2 isof... 730 0.0
Alignment gi|XP_537479.1| PREDICTED: similar to heat shock protein 2 isof... 730 0.0
Alignment gi|XP_532082.1| PREDICTED: similar to heat shock 70kDa protein ... 724 0.0
Alignment gi|NP_001003067.1| heat shock 70 kDa protein 1 [Canis lupus fam... 714 0.0
Alignment gi|XP_533290.2| PREDICTED: similar to Heat shock cognate 71 kDa... 706 0.0
Alignment gi|XP_860232.1| PREDICTED: similar to heat shock 70kDa protein ... 677 0.0
>ref|XP_536543.1| PREDICTED: similar to Heat shock cognate 71 kDa protein (Heat shock
70 kDa protein 8) isoform 1 [Canis familiaris].
Length = 646
Score = 817 bits (2110), Expect = 0.0
Identities = 429/493 (87%), Positives = 429/493 (87%)
Frame = +1
Query: 1 QRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFGVSILTIE 180
QRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTF VSILTIE
Sbjct: 154 QRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIE 213
Query: 181 DGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRT 360
DGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRT
Sbjct: 214 DGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRT 273
Query: 361 LSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHD 540
LSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHD
Sbjct: 274 LSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHD 333
Query: 541 IVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILSGDKSENVQDXXX 720
IVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDE ILSGDKSENVQD
Sbjct: 334 IVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLL 393
Query: 721 XXXXXXXXGIETAGGVMTVLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKDN 900
GIETAGGVMTVLIKRN YSDNQPGVLIQVYEGERAMTKDN
Sbjct: 394 LDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDN 453
Query: 901 NLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKE 1080
NLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKE
Sbjct: 454 NLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKE 513
Query: 1081 DIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDK 1260
DIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDK
Sbjct: 514 DIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDK 573
Query: 1261 CNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQXXXXXXXXXXXXXXXXXXXXX 1440
CNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQ
Sbjct: 574 CNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQSAGGMPGGMPGGFPGGGAPPS 633
Query: 1441 XXXXXXXTIEEVD 1479
TIEEVD
Sbjct: 634 GGASSGPTIEEVD 646
>ref|XP_851030.1| PREDICTED: similar to Heat shock cognate 71 kDa protein (Heat shock
70 kDa protein 8) [Canis familiaris].
Length = 600
Score = 785 bits (2027), Expect = 0.0
Identities = 416/493 (84%), Positives = 418/493 (84%)
Frame = +1
Query: 1 QRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFGVSILTIE 180
QRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTF VSILT
Sbjct: 113 QRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILT-- 170
Query: 181 DGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRT 360
F+VKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACE AKRT
Sbjct: 171 ---FDVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACEWAKRT 227
Query: 361 LSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHD 540
LSSSTQASIEIDSL+EGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHD
Sbjct: 228 LSSSTQASIEIDSLHEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHD 287
Query: 541 IVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILSGDKSENVQDXXX 720
IVLVGGST IPKIQKLLQDFFNGKELNKSINPDE ILSGDKSENVQD
Sbjct: 288 IVLVGGSTHIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQATILSGDKSENVQDLLL 347
Query: 721 XXXXXXXXGIETAGGVMTVLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKDN 900
GIETAGGVMTVLIK N YSDNQPGVLIQVYEGE AMTKDN
Sbjct: 348 LDVTPLSLGIETAGGVMTVLIKHNTTIPTKQTQTFTTYSDNQPGVLIQVYEGEHAMTKDN 407
Query: 901 NLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKE 1080
NLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKE
Sbjct: 408 NLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKE 467
Query: 1081 DIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDK 1260
D ERMV EAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDK
Sbjct: 468 DTERMVPEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDK 527
Query: 1261 CNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQXXXXXXXXXXXXXXXXXXXXX 1440
CNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQ
Sbjct: 528 CNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQSAGGMPGGMPGGFPGGGAPPS 587
Query: 1441 XXXXXXXTIEEVD 1479
TIEEVD
Sbjct: 588 GGASSGPTIEEVD 600
>ref|XP_859472.1| PREDICTED: similar to Heat shock cognate 71 kDa protein (Heat shock
70 kDa protein 8) isoform 4 [Canis familiaris].
Length = 616
Score = 746 bits (1927), Expect = 0.0
Identities = 400/493 (81%), Positives = 400/493 (81%)
Frame = +1
Query: 1 QRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFGVSILTIE 180
QRQATKDAGTIAGLNVLRIINEPTAAAIAY
Sbjct: 154 QRQATKDAGTIAGLNVLRIINEPTAAAIAY------------------------------ 183
Query: 181 DGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRT 360
DGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRT
Sbjct: 184 DGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRT 243
Query: 361 LSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHD 540
LSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHD
Sbjct: 244 LSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHD 303
Query: 541 IVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILSGDKSENVQDXXX 720
IVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDE ILSGDKSENVQD
Sbjct: 304 IVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLL 363
Query: 721 XXXXXXXXGIETAGGVMTVLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKDN 900
GIETAGGVMTVLIKRN YSDNQPGVLIQVYEGERAMTKDN
Sbjct: 364 LDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDN 423
Query: 901 NLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKE 1080
NLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKE
Sbjct: 424 NLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKE 483
Query: 1081 DIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDK 1260
DIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDK
Sbjct: 484 DIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDK 543
Query: 1261 CNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQXXXXXXXXXXXXXXXXXXXXX 1440
CNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQ
Sbjct: 544 CNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQSAGGMPGGMPGGFPGGGAPPS 603
Query: 1441 XXXXXXXTIEEVD 1479
TIEEVD
Sbjct: 604 GGASSGPTIEEVD 616
>ref|XP_848246.1| PREDICTED: similar to Heat shock cognate 71 kDa protein (Heat shock
70 kDa protein 8) isoform 1 [Canis familiaris].
Length = 616
Score = 737 bits (1902), Expect = 0.0
Identities = 396/493 (80%), Positives = 397/493 (80%)
Frame = +1
Query: 1 QRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFGVSILTIE 180
QRQATKDAGTIAGLNVLRIINEPTAAAIAY
Sbjct: 154 QRQATKDAGTIAGLNVLRIINEPTAAAIAY------------------------------ 183
Query: 181 DGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRT 360
DGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVR LRTACERAKRT
Sbjct: 184 DGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRCLRTACERAKRT 243
Query: 361 LSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHD 540
LSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHD
Sbjct: 244 LSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHD 303
Query: 541 IVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILSGDKSENVQDXXX 720
IVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDE ILSGDKSENVQD
Sbjct: 304 IVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLL 363
Query: 721 XXXXXXXXGIETAGGVMTVLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKDN 900
GIETAGGVMTVLIKRN YSDNQPGVLIQVYEGE AMTKDN
Sbjct: 364 LDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGEHAMTKDN 423
Query: 901 NLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKE 1080
NLLGKFELTGIPPAPRGVPQIEVTFDIDAN ILNVSAVDKSTGKENKITITNDKGRLSKE
Sbjct: 424 NLLGKFELTGIPPAPRGVPQIEVTFDIDANDILNVSAVDKSTGKENKITITNDKGRLSKE 483
Query: 1081 DIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDK 1260
DIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDK
Sbjct: 484 DIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDK 543
Query: 1261 CNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQXXXXXXXXXXXXXXXXXXXXX 1440
CNEIINWL+KNQTAEKEEFEHQQKELEKVCNPIITKLYQ
Sbjct: 544 CNEIINWLNKNQTAEKEEFEHQQKELEKVCNPIITKLYQSAGGMPGGMPGGFPGGGAPPS 603
Query: 1441 XXXXXXXTIEEVD 1479
TIEEVD
Sbjct: 604 GGASSGPTIEEVD 616
>ref|XP_866274.1| PREDICTED: similar to heat shock protein 2 isoform 2 [Canis
familiaris].
Length = 620
Score = 730 bits (1884), Expect = 0.0
Identities = 371/461 (80%), Positives = 401/461 (86%), Gaps = 2/461 (0%)
Frame = +1
Query: 1 QRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKK--VGAERNVLIFDLGGGTFGVSILT 174
QRQATKDAGTI GLNVLRIINEPTAAAIAYGLDKK G E+NVLIFDLGGGTF VSILT
Sbjct: 138 QRQATKDAGTITGLNVLRIINEPTAAAIAYGLDKKGCAGGEKNVLIFDLGGGTFDVSILT 197
Query: 175 IEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAK 354
IEDGIFEVKSTAGDTHLGGEDFDNRMV+H EFKRKHKKDI NKRAVRRLRTACERAK
Sbjct: 198 IEDGIFEVKSTAGDTHLGGEDFDNRMVSHLAEEFKRKHKKDIGPNKRAVRRLRTACERAK 257
Query: 355 RTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQI 534
RTLSSSTQASIEIDSLYEG+DFYTSITRARFEELNADLFRGTL+PVEKALRDAKLDK QI
Sbjct: 258 RTLSSSTQASIEIDSLYEGVDFYTSITRARFEELNADLFRGTLEPVEKALRDAKLDKGQI 317
Query: 535 HDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILSGDKSENVQDX 714
+IVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDE IL GDKSENVQD
Sbjct: 318 QEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILIGDKSENVQDL 377
Query: 715 XXXXXXXXXXGIETAGGVMTVLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTK 894
GIETAGGVMT LIKRN YSDNQ VL+QVYEGERAMTK
Sbjct: 378 LLLDVTPLSLGIETAGGVMTPLIKRNTTIPTKQTQTFTTYSDNQSSVLVQVYEGERAMTK 437
Query: 895 DNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLS 1074
DNNLLGKF+LTGIPPAPRGVPQIEVTFDIDANGILNV+A DKSTGKENKITITNDKGRLS
Sbjct: 438 DNNLLGKFDLTGIPPAPRGVPQIEVTFDIDANGILNVTAADKSTGKENKITITNDKGRLS 497
Query: 1075 KEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKIL 1254
K+DI+RMVQEAE+YK+EDE RD+V++KN++ESY +N+K TVEDEKL+GKI+++DK KIL
Sbjct: 498 KDDIDRMVQEAERYKSEDEANRDRVAAKNAVESYTYNIKQTVEDEKLRGKISEQDKNKIL 557
Query: 1255 DKCNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQ 1377
DKC E+INWLD+NQ AEK+E+EH+QKELE+VCNPII+KLYQ
Sbjct: 558 DKCQEVINWLDRNQMAEKDEYEHKQKELERVCNPIISKLYQ 598
>ref|XP_537479.1| PREDICTED: similar to heat shock protein 2 isoform 1 [Canis
familiaris].
Length = 637
Score = 730 bits (1884), Expect = 0.0
Identities = 371/461 (80%), Positives = 401/461 (86%), Gaps = 2/461 (0%)
Frame = +1
Query: 1 QRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKK--VGAERNVLIFDLGGGTFGVSILT 174
QRQATKDAGTI GLNVLRIINEPTAAAIAYGLDKK G E+NVLIFDLGGGTF VSILT
Sbjct: 155 QRQATKDAGTITGLNVLRIINEPTAAAIAYGLDKKGCAGGEKNVLIFDLGGGTFDVSILT 214
Query: 175 IEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAK 354
IEDGIFEVKSTAGDTHLGGEDFDNRMV+H EFKRKHKKDI NKRAVRRLRTACERAK
Sbjct: 215 IEDGIFEVKSTAGDTHLGGEDFDNRMVSHLAEEFKRKHKKDIGPNKRAVRRLRTACERAK 274
Query: 355 RTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQI 534
RTLSSSTQASIEIDSLYEG+DFYTSITRARFEELNADLFRGTL+PVEKALRDAKLDK QI
Sbjct: 275 RTLSSSTQASIEIDSLYEGVDFYTSITRARFEELNADLFRGTLEPVEKALRDAKLDKGQI 334
Query: 535 HDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILSGDKSENVQDX 714
+IVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDE IL GDKSENVQD
Sbjct: 335 QEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILIGDKSENVQDL 394
Query: 715 XXXXXXXXXXGIETAGGVMTVLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTK 894
GIETAGGVMT LIKRN YSDNQ VL+QVYEGERAMTK
Sbjct: 395 LLLDVTPLSLGIETAGGVMTPLIKRNTTIPTKQTQTFTTYSDNQSSVLVQVYEGERAMTK 454
Query: 895 DNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLS 1074
DNNLLGKF+LTGIPPAPRGVPQIEVTFDIDANGILNV+A DKSTGKENKITITNDKGRLS
Sbjct: 455 DNNLLGKFDLTGIPPAPRGVPQIEVTFDIDANGILNVTAADKSTGKENKITITNDKGRLS 514
Query: 1075 KEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKIL 1254
K+DI+RMVQEAE+YK+EDE RD+V++KN++ESY +N+K TVEDEKL+GKI+++DK KIL
Sbjct: 515 KDDIDRMVQEAERYKSEDEANRDRVAAKNAVESYTYNIKQTVEDEKLRGKISEQDKNKIL 574
Query: 1255 DKCNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQ 1377
DKC E+INWLD+NQ AEK+E+EH+QKELE+VCNPII+KLYQ
Sbjct: 575 DKCQEVINWLDRNQMAEKDEYEHKQKELERVCNPIISKLYQ 615
>ref|XP_532082.1| PREDICTED: similar to heat shock 70kDa protein 1-like isoform 1
[Canis familiaris].
Length = 641
Score = 724 bits (1869), Expect = 0.0
Identities = 363/459 (79%), Positives = 404/459 (88%)
Frame = +1
Query: 1 QRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFGVSILTIE 180
QRQATKDAG IAGLNVLRIINEPTAAAIAYGLDK ER+VLIFDLGGGTF VSILTI+
Sbjct: 156 QRQATKDAGVIAGLNVLRIINEPTAAAIAYGLDKTGQGERHVLIFDLGGGTFDVSILTID 215
Query: 181 DGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRT 360
DGIFEVK+TAGDTHLGGEDFDNR+V+HF+ EFKRKHKKDIS+NKRAVRRLRTACERAKRT
Sbjct: 216 DGIFEVKATAGDTHLGGEDFDNRLVSHFVEEFKRKHKKDISQNKRAVRRLRTACERAKRT 275
Query: 361 LSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHD 540
LSSSTQA++EIDSLYEGIDFYTSITRARFEEL ADLFRGTL+PVEKALRDAK+DK +IHD
Sbjct: 276 LSSSTQANLEIDSLYEGIDFYTSITRARFEELCADLFRGTLEPVEKALRDAKMDKVKIHD 335
Query: 541 IVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILSGDKSENVQDXXX 720
IVLVGGSTRIPK+Q+LLQD+FNG++LNKSINPDE IL GDKSE VQD
Sbjct: 336 IVLVGGSTRIPKVQRLLQDYFNGRDLNKSINPDEAVAYGAAVQAAILMGDKSEKVQDLLL 395
Query: 721 XXXXXXXXGIETAGGVMTVLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKDN 900
G+ETAGGVMTVLIKRN YSDNQPGVLIQVYEGERAMT+DN
Sbjct: 396 LDVAPLSLGLETAGGVMTVLIKRNSTIPTKQTQIFTTYSDNQPGVLIQVYEGERAMTRDN 455
Query: 901 NLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKE 1080
NLLG+F+LTGIPPAPRGVPQIEVTFDIDANGILNV+A+DKSTGK NKITITNDKGRLSKE
Sbjct: 456 NLLGRFDLTGIPPAPRGVPQIEVTFDIDANGILNVTAMDKSTGKANKITITNDKGRLSKE 515
Query: 1081 DIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDK 1260
+IERMV +AEKYKAEDE QR+K+S+KN+LESYAFNMK+ V DE L+GKIND DK+KILDK
Sbjct: 516 EIERMVLDAEKYKAEDEVQREKISAKNALESYAFNMKSAVSDEGLKGKINDSDKKKILDK 575
Query: 1261 CNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQ 1377
CNE+++WL+ NQ AEKEEF+H++KELE+VCNP+ITKLYQ
Sbjct: 576 CNEVLSWLEANQLAEKEEFDHKRKELEQVCNPVITKLYQ 614
>ref|NP_001003067.1| heat shock 70 kDa protein 1 [Canis lupus familiaris].
Length = 640
Score = 714 bits (1842), Expect = 0.0
Identities = 363/459 (79%), Positives = 399/459 (86%)
Frame = +1
Query: 1 QRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFGVSILTIE 180
QRQATKDAG IAGLNVLRIINEPTAAAIAYGLD+ ERNVLIFDLGGGTF VSILTI+
Sbjct: 154 QRQATKDAGVIAGLNVLRIINEPTAAAIAYGLDRTGKGERNVLIFDLGGGTFDVSILTID 213
Query: 181 DGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRT 360
DGIFEVK+TAGDTHLGGEDFDNR+VNHF+ EFKRKHKKDIS+NKRAVRRLRTACERAKRT
Sbjct: 214 DGIFEVKATAGDTHLGGEDFDNRLVNHFVEEFKRKHKKDISQNKRAVRRLRTACERAKRT 273
Query: 361 LSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHD 540
LSSSTQAS+EIDSL+EGIDFYTSITRARFEEL +DLFR TL+PVEKALRDAKLDK+QIHD
Sbjct: 274 LSSSTQASLEIDSLFEGIDFYTSITRARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHD 333
Query: 541 IVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILSGDKSENVQDXXX 720
+VLVGGSTRIPK+QKLLQDFFNG++LNKSINPDE IL GDKSENVQD
Sbjct: 334 LVLVGGSTRIPKVQKLLQDFFNGRDLNKSINPDEAVAYGAAVQAAILMGDKSENVQDLLL 393
Query: 721 XXXXXXXXGIETAGGVMTVLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKDN 900
G+ETAGGVMT L RN YSDNQPGVLIQVYEGERAMT+DN
Sbjct: 394 LDVAPLSLGLETAGGVMTAL-SRNSTIPTKQTQIFTTYSDNQPGVLIQVYEGERAMTRDN 452
Query: 901 NLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKE 1080
NLLG+FEL+GIPPAPRGVPQIEVTFDIDANGILNV+A DKSTGK NKITITNDKGRLSKE
Sbjct: 453 NLLGRFELSGIPPAPRGVPQIEVTFDIDANGILNVTATDKSTGKANKITITNDKGRLSKE 512
Query: 1081 DIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDK 1260
+IERMVQEAEKYKAEDE QRD+VS+KN+LESYAFNMK+ VEDE L+GKI++ DK+K+LDK
Sbjct: 513 EIERMVQEAEKYKAEDEVQRDRVSAKNALESYAFNMKSAVEDEGLKGKISEADKKKVLDK 572
Query: 1261 CNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQ 1377
C E+I+WLD AEK+EFEH++KELE+VCNPIIT LYQ
Sbjct: 573 CQEVISWLDGFTLAEKDEFEHKRKELEQVCNPIITGLYQ 611
>ref|XP_533290.2| PREDICTED: similar to Heat shock cognate 71 kDa protein (Heat shock
70 kDa protein 8) [Canis familiaris].
Length = 576
Score = 706 bits (1822), Expect = 0.0
Identities = 370/454 (81%), Positives = 380/454 (83%)
Frame = +1
Query: 1 QRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFGVSILTIE 180
Q QATKD+GTIAGLNVLRI NEPTA AIAYGLDKK GAERNVLIFDL GGTF V ILTIE
Sbjct: 68 QCQATKDSGTIAGLNVLRIFNEPTAGAIAYGLDKKAGAERNVLIFDLEGGTFDVLILTIE 127
Query: 181 DGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRT 360
DGIFEVKSTAGDTHL GEDFDN+MVNHFIAEFK KHKK+IS+ KRAV L TACE AK T
Sbjct: 128 DGIFEVKSTAGDTHLDGEDFDNQMVNHFIAEFKSKHKKNISKYKRAVLHLCTACEWAKHT 187
Query: 361 LSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHD 540
LSSS QASIE DSLYEGID Y SIT A+FEELN DLF GTLDPVEKALRDAKLDKSQIHD
Sbjct: 188 LSSSIQASIETDSLYEGIDLYISITHAQFEELNTDLFHGTLDPVEKALRDAKLDKSQIHD 247
Query: 541 IVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILSGDKSENVQDXXX 720
VLVGGST IPKIQKLLQDFFNGKELNKSINPDE ILSGDKSENVQD
Sbjct: 248 TVLVGGSTHIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDFLL 307
Query: 721 XXXXXXXXGIETAGGVMTVLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKDN 900
GIETAGGVMTVLIKRN YSDNQ GVLIQVYEGER MTKDN
Sbjct: 308 LDVTPLSLGIETAGGVMTVLIKRNTTIPAKQTQTFTTYSDNQTGVLIQVYEGERVMTKDN 367
Query: 901 NLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKE 1080
NLLGKFELTGIPPAP GVPQIEVTFDIDANGILNVSAVDKSTGKENKIT TNDKGRLSKE
Sbjct: 368 NLLGKFELTGIPPAPCGVPQIEVTFDIDANGILNVSAVDKSTGKENKITNTNDKGRLSKE 427
Query: 1081 DIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDK 1260
DIERMVQEAEKYK EDEKQRDKVSSKNSLESYAFNMK TVEDEKLQGKIND+DKQKIL K
Sbjct: 428 DIERMVQEAEKYKVEDEKQRDKVSSKNSLESYAFNMKTTVEDEKLQGKINDKDKQKILHK 487
Query: 1261 CNEIINWLDKNQTAEKEEFEHQQKELEKVCNPII 1362
CNE INWL+KNQTAEKEEFEH +K K P++
Sbjct: 488 CNETINWLNKNQTAEKEEFEHHRKSWRKSATPLL 521
Score = 51.6 bits (122), Expect = 2e-06
Identities = 25/45 (55%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Frame = +2
Query: 1283 WI-RTRLRRRKNLNISRRSWRKSATPSLPSSTRVQEACQEECLGA 1414
W+ + + ++ R+SWRKSATP L S TRVQEACQEECL A
Sbjct: 494 WLNKNQTAEKEEFEHHRKSWRKSATPLLRSYTRVQEACQEECLEA 538
>ref|XP_860232.1| PREDICTED: similar to heat shock 70kDa protein 1-like isoform 2
[Canis familiaris].
Length = 617
Score = 677 bits (1747), Expect = 0.0
Identities = 344/459 (74%), Positives = 384/459 (83%)
Frame = +1
Query: 1 QRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFGVSILTIE 180
QRQATKDAG IAGLNVLRIINEPTAAAIAYGLDK +
Sbjct: 156 QRQATKDAGVIAGLNVLRIINEPTAAAIAYGLDKT------------------------D 191
Query: 181 DGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRT 360
DGIFEVK+TAGDTHLGGEDFDNR+V+HF+ EFKRKHKKDIS+NKRAVRRLRTACERAKRT
Sbjct: 192 DGIFEVKATAGDTHLGGEDFDNRLVSHFVEEFKRKHKKDISQNKRAVRRLRTACERAKRT 251
Query: 361 LSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHD 540
LSSSTQA++EIDSLYEGIDFYTSITRARFEEL ADLFRGTL+PVEKALRDAK+DK +IHD
Sbjct: 252 LSSSTQANLEIDSLYEGIDFYTSITRARFEELCADLFRGTLEPVEKALRDAKMDKVKIHD 311
Query: 541 IVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILSGDKSENVQDXXX 720
IVLVGGSTRIPK+Q+LLQD+FNG++LNKSINPDE IL GDKSE VQD
Sbjct: 312 IVLVGGSTRIPKVQRLLQDYFNGRDLNKSINPDEAVAYGAAVQAAILMGDKSEKVQDLLL 371
Query: 721 XXXXXXXXGIETAGGVMTVLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKDN 900
G+ETAGGVMTVLIKRN YSDNQPGVLIQVYEGERAMT+DN
Sbjct: 372 LDVAPLSLGLETAGGVMTVLIKRNSTIPTKQTQIFTTYSDNQPGVLIQVYEGERAMTRDN 431
Query: 901 NLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKE 1080
NLLG+F+LTGIPPAPRGVPQIEVTFDIDANGILNV+A+DKSTGK NKITITNDKGRLSKE
Sbjct: 432 NLLGRFDLTGIPPAPRGVPQIEVTFDIDANGILNVTAMDKSTGKANKITITNDKGRLSKE 491
Query: 1081 DIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDK 1260
+IERMV +AEKYKAEDE QR+K+S+KN+LESYAFNMK+ V DE L+GKIND DK+KILDK
Sbjct: 492 EIERMVLDAEKYKAEDEVQREKISAKNALESYAFNMKSAVSDEGLKGKINDSDKKKILDK 551
Query: 1261 CNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQ 1377
CNE+++WL+ NQ AEKEEF+H++KELE+VCNP+ITKLYQ
Sbjct: 552 CNEVLSWLEANQLAEKEEFDHKRKELEQVCNPVITKLYQ 590
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 59,859,038
Number of extensions: 1512571
Number of successful extensions: 6349
Number of sequences better than 1.0e-05: 63
Number of HSP's gapped: 6119
Number of HSP's successfully gapped: 78
Length of query: 589
Length of database: 18,874,504
Length adjustment: 108
Effective length of query: 481
Effective length of database: 15,274,216
Effective search space: 7346897896
Effective search space used: 7346897896
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-001103
(1767 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_006588.1| heat shock cognate 71 kDa protein isoform 1 [Ho... 817 0.0
Alignment gi|NP_068814.2| heat shock-related 70 kDa protein 2 [Homo sapie... 731 0.0
Alignment gi|NP_005336.3| heat shock 70 kDa protein 1A/1B [Homo sapiens]. 724 0.0
Alignment gi|NP_005337.2| heat shock 70 kDa protein 1A/1B [Homo sapiens]. 724 0.0
Alignment gi|NP_005518.3| heat shock 70 kDa protein 1-like [Homo sapiens]. 716 0.0
Alignment gi|NP_002146.2| heat shock 70 kDa protein 6 [Homo sapiens]. 678 0.0
Alignment gi|NP_694881.1| heat shock cognate 71 kDa protein isoform 2 [Ho... 526 e-149
Alignment gi|NP_005338.1| 78 kDa glucose-regulated protein precursor [Hom... 525 e-149
Alignment gi|NP_004125.3| stress-70 protein, mitochondrial precursor [Hom... 363 e-100
Alignment gi|NP_057383.2| heat shock 70 kDa protein 14 isoform 1 [Homo sa... 175 1e-43
>ref|NP_006588.1| heat shock cognate 71 kDa protein isoform 1 [Homo sapiens].
Length = 646
Score = 817 bits (2110), Expect = 0.0
Identities = 429/493 (87%), Positives = 429/493 (87%)
Frame = +1
Query: 1 QRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFGVSILTIE 180
QRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTF VSILTIE
Sbjct: 154 QRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIE 213
Query: 181 DGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRT 360
DGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRT
Sbjct: 214 DGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRT 273
Query: 361 LSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHD 540
LSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHD
Sbjct: 274 LSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHD 333
Query: 541 IVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILSGDKSENVQDXXX 720
IVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDE ILSGDKSENVQD
Sbjct: 334 IVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLL 393
Query: 721 XXXXXXXXGIETAGGVMTVLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKDN 900
GIETAGGVMTVLIKRN YSDNQPGVLIQVYEGERAMTKDN
Sbjct: 394 LDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDN 453
Query: 901 NLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKE 1080
NLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKE
Sbjct: 454 NLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKE 513
Query: 1081 DIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDK 1260
DIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDK
Sbjct: 514 DIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDK 573
Query: 1261 CNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQXXXXXXXXXXXXXXXXXXXXX 1440
CNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQ
Sbjct: 574 CNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQSAGGMPGGMPGGFPGGGAPPS 633
Query: 1441 XXXXXXXTIEEVD 1479
TIEEVD
Sbjct: 634 GGASSGPTIEEVD 646
>ref|NP_068814.2| heat shock-related 70 kDa protein 2 [Homo sapiens].
Length = 639
Score = 731 bits (1887), Expect = 0.0
Identities = 372/461 (80%), Positives = 401/461 (86%), Gaps = 2/461 (0%)
Frame = +1
Query: 1 QRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKK--VGAERNVLIFDLGGGTFGVSILT 174
QRQATKDAGTI GLNVLRIINEPTAAAIAYGLDKK G E+NVLIFDLGGGTF VSILT
Sbjct: 155 QRQATKDAGTITGLNVLRIINEPTAAAIAYGLDKKGCAGGEKNVLIFDLGGGTFDVSILT 214
Query: 175 IEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAK 354
IEDGIFEVKSTAGDTHLGGEDFDNRMV+H EFKRKHKKDI NKRAVRRLRTACERAK
Sbjct: 215 IEDGIFEVKSTAGDTHLGGEDFDNRMVSHLAEEFKRKHKKDIGPNKRAVRRLRTACERAK 274
Query: 355 RTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQI 534
RTLSSSTQASIEIDSLYEG+DFYTSITRARFEELNADLFRGTL+PVEKALRDAKLDK QI
Sbjct: 275 RTLSSSTQASIEIDSLYEGVDFYTSITRARFEELNADLFRGTLEPVEKALRDAKLDKGQI 334
Query: 535 HDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILSGDKSENVQDX 714
+IVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDE IL GDKSENVQD
Sbjct: 335 QEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILIGDKSENVQDL 394
Query: 715 XXXXXXXXXXGIETAGGVMTVLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTK 894
GIETAGGVMT LIKRN YSDNQ VL+QVYEGERAMTK
Sbjct: 395 LLLDVTPLSLGIETAGGVMTPLIKRNTTIPTKQTQTFTTYSDNQSSVLVQVYEGERAMTK 454
Query: 895 DNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLS 1074
DNNLLGKF+LTGIPPAPRGVPQIEVTFDIDANGILNV+A DKSTGKENKITITNDKGRLS
Sbjct: 455 DNNLLGKFDLTGIPPAPRGVPQIEVTFDIDANGILNVTAADKSTGKENKITITNDKGRLS 514
Query: 1075 KEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKIL 1254
K+DI+RMVQEAE+YK+EDE RD+V++KN+LESY +N+K TVEDEKL+GKI+++DK KIL
Sbjct: 515 KDDIDRMVQEAERYKSEDEANRDRVAAKNALESYTYNIKQTVEDEKLRGKISEQDKNKIL 574
Query: 1255 DKCNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQ 1377
DKC E+INWLD+NQ AEK+E+EH+QKELE+VCNPII+KLYQ
Sbjct: 575 DKCQEVINWLDRNQMAEKDEYEHKQKELERVCNPIISKLYQ 615
>ref|NP_005336.3| heat shock 70 kDa protein 1A/1B [Homo sapiens].
Length = 641
Score = 724 bits (1868), Expect = 0.0
Identities = 365/459 (79%), Positives = 402/459 (87%)
Frame = +1
Query: 1 QRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFGVSILTIE 180
QRQATKDAG IAGLNVLRIINEPTAAAIAYGLD+ ERNVLIFDLGGGTF VSILTI+
Sbjct: 154 QRQATKDAGVIAGLNVLRIINEPTAAAIAYGLDRTGKGERNVLIFDLGGGTFDVSILTID 213
Query: 181 DGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRT 360
DGIFEVK+TAGDTHLGGEDFDNR+VNHF+ EFKRKHKKDIS+NKRAVRRLRTACERAKRT
Sbjct: 214 DGIFEVKATAGDTHLGGEDFDNRLVNHFVEEFKRKHKKDISQNKRAVRRLRTACERAKRT 273
Query: 361 LSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHD 540
LSSSTQAS+EIDSL+EGIDFYTSITRARFEEL +DLFR TL+PVEKALRDAKLDK+QIHD
Sbjct: 274 LSSSTQASLEIDSLFEGIDFYTSITRARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHD 333
Query: 541 IVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILSGDKSENVQDXXX 720
+VLVGGSTRIPK+QKLLQDFFNG++LNKSINPDE IL GDKSENVQD
Sbjct: 334 LVLVGGSTRIPKVQKLLQDFFNGRDLNKSINPDEAVAYGAAVQAAILMGDKSENVQDLLL 393
Query: 721 XXXXXXXXGIETAGGVMTVLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKDN 900
G+ETAGGVMT LIKRN YSDNQPGVLIQVYEGERAMTKDN
Sbjct: 394 LDVAPLSLGLETAGGVMTALIKRNSTIPTKQTQIFTTYSDNQPGVLIQVYEGERAMTKDN 453
Query: 901 NLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKE 1080
NLLG+FEL+GIPPAPRGVPQIEVTFDIDANGILNV+A DKSTGK NKITITNDKGRLSKE
Sbjct: 454 NLLGRFELSGIPPAPRGVPQIEVTFDIDANGILNVTATDKSTGKANKITITNDKGRLSKE 513
Query: 1081 DIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDK 1260
+IERMVQEAEKYKAEDE QR++VS+KN+LESYAFNMK+ VEDE L+GKI++ DK+K+LDK
Sbjct: 514 EIERMVQEAEKYKAEDEVQRERVSAKNALESYAFNMKSAVEDEGLKGKISEADKKKVLDK 573
Query: 1261 CNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQ 1377
C E+I+WLD N AEK+EFEH++KELE+VCNPII+ LYQ
Sbjct: 574 CQEVISWLDANTLAEKDEFEHKRKELEQVCNPIISGLYQ 612
>ref|NP_005337.2| heat shock 70 kDa protein 1A/1B [Homo sapiens].
Length = 641
Score = 724 bits (1868), Expect = 0.0
Identities = 365/459 (79%), Positives = 402/459 (87%)
Frame = +1
Query: 1 QRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFGVSILTIE 180
QRQATKDAG IAGLNVLRIINEPTAAAIAYGLD+ ERNVLIFDLGGGTF VSILTI+
Sbjct: 154 QRQATKDAGVIAGLNVLRIINEPTAAAIAYGLDRTGKGERNVLIFDLGGGTFDVSILTID 213
Query: 181 DGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRT 360
DGIFEVK+TAGDTHLGGEDFDNR+VNHF+ EFKRKHKKDIS+NKRAVRRLRTACERAKRT
Sbjct: 214 DGIFEVKATAGDTHLGGEDFDNRLVNHFVEEFKRKHKKDISQNKRAVRRLRTACERAKRT 273
Query: 361 LSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHD 540
LSSSTQAS+EIDSL+EGIDFYTSITRARFEEL +DLFR TL+PVEKALRDAKLDK+QIHD
Sbjct: 274 LSSSTQASLEIDSLFEGIDFYTSITRARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHD 333
Query: 541 IVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILSGDKSENVQDXXX 720
+VLVGGSTRIPK+QKLLQDFFNG++LNKSINPDE IL GDKSENVQD
Sbjct: 334 LVLVGGSTRIPKVQKLLQDFFNGRDLNKSINPDEAVAYGAAVQAAILMGDKSENVQDLLL 393
Query: 721 XXXXXXXXGIETAGGVMTVLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKDN 900
G+ETAGGVMT LIKRN YSDNQPGVLIQVYEGERAMTKDN
Sbjct: 394 LDVAPLSLGLETAGGVMTALIKRNSTIPTKQTQIFTTYSDNQPGVLIQVYEGERAMTKDN 453
Query: 901 NLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKE 1080
NLLG+FEL+GIPPAPRGVPQIEVTFDIDANGILNV+A DKSTGK NKITITNDKGRLSKE
Sbjct: 454 NLLGRFELSGIPPAPRGVPQIEVTFDIDANGILNVTATDKSTGKANKITITNDKGRLSKE 513
Query: 1081 DIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDK 1260
+IERMVQEAEKYKAEDE QR++VS+KN+LESYAFNMK+ VEDE L+GKI++ DK+K+LDK
Sbjct: 514 EIERMVQEAEKYKAEDEVQRERVSAKNALESYAFNMKSAVEDEGLKGKISEADKKKVLDK 573
Query: 1261 CNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQ 1377
C E+I+WLD N AEK+EFEH++KELE+VCNPII+ LYQ
Sbjct: 574 CQEVISWLDANTLAEKDEFEHKRKELEQVCNPIISGLYQ 612
>ref|NP_005518.3| heat shock 70 kDa protein 1-like [Homo sapiens].
Length = 641
Score = 716 bits (1848), Expect = 0.0
Identities = 359/459 (78%), Positives = 402/459 (87%)
Frame = +1
Query: 1 QRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFGVSILTIE 180
QRQATKDAG IAGLNVLRIINEPTAAAIAYGLDK ER+VLIFDLGGGTF VSILTI+
Sbjct: 156 QRQATKDAGVIAGLNVLRIINEPTAAAIAYGLDKGGQGERHVLIFDLGGGTFDVSILTID 215
Query: 181 DGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRT 360
DGIFEVK+TAGDTHLGGEDFDNR+V+HF+ EFKRKHKKDIS+NKRAVRRLRTACERAKRT
Sbjct: 216 DGIFEVKATAGDTHLGGEDFDNRLVSHFVEEFKRKHKKDISQNKRAVRRLRTACERAKRT 275
Query: 361 LSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHD 540
LSSSTQA++EIDSLYEGIDFYTSITRARFEEL ADLFRGTL+PVEKALRDAK+DK++IHD
Sbjct: 276 LSSSTQANLEIDSLYEGIDFYTSITRARFEELCADLFRGTLEPVEKALRDAKMDKAKIHD 335
Query: 541 IVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILSGDKSENVQDXXX 720
IVLVGGSTRIPK+Q+LLQD+FNG++LNKSINPDE IL GDKSE VQD
Sbjct: 336 IVLVGGSTRIPKVQRLLQDYFNGRDLNKSINPDEAVAYGAAVQAAILMGDKSEKVQDLLL 395
Query: 721 XXXXXXXXGIETAGGVMTVLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKDN 900
G+ETAGGVMT LIKRN YSDNQPGVLIQVYEGERAMTKDN
Sbjct: 396 LDVAPLSLGLETAGGVMTALIKRNSTIPTKQTQIFTTYSDNQPGVLIQVYEGERAMTKDN 455
Query: 901 NLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKE 1080
NLLG+F+LTGIPPAPRGVPQIEVTFDIDANGILNV+A DKSTGK NKITITNDKGRLSKE
Sbjct: 456 NLLGRFDLTGIPPAPRGVPQIEVTFDIDANGILNVTATDKSTGKVNKITITNDKGRLSKE 515
Query: 1081 DIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDK 1260
+IERMV +AEKYKAEDE QR+K+++KN+LESYAFNMK+ V DE L+GKI++ DK KILDK
Sbjct: 516 EIERMVLDAEKYKAEDEVQREKIAAKNALESYAFNMKSVVSDEGLKGKISESDKNKILDK 575
Query: 1261 CNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQ 1377
CNE+++WL+ NQ AEK+EF+H++KELE++CNPIITKLYQ
Sbjct: 576 CNELLSWLEVNQLAEKDEFDHKRKELEQMCNPIITKLYQ 614
>ref|NP_002146.2| heat shock 70 kDa protein 6 [Homo sapiens].
Length = 643
Score = 678 bits (1750), Expect = 0.0
Identities = 333/458 (72%), Positives = 391/458 (85%)
Frame = +1
Query: 1 QRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFGVSILTIE 180
QRQATKDAG IAGLNVLRIINEPTAAAIAYGLD++ ERNVLIFDLGGGTF VS+L+I+
Sbjct: 156 QRQATKDAGAIAGLNVLRIINEPTAAAIAYGLDRRGAGERNVLIFDLGGGTFDVSVLSID 215
Query: 181 DGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRT 360
G+FEVK+TAGDTHLGGEDFDNR+VNHF+ EF+RKH KD+S NKRA+RRLRTACERAKRT
Sbjct: 216 AGVFEVKATAGDTHLGGEDFDNRLVNHFMEEFRRKHGKDLSGNKRALRRLRTACERAKRT 275
Query: 361 LSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHD 540
LSSSTQA++EIDSL+EG+DFYTSITRARFEEL +DLFR TL+PVEKALRDAKLDK+QIHD
Sbjct: 276 LSSSTQATLEIDSLFEGVDFYTSITRARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHD 335
Query: 541 IVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILSGDKSENVQDXXX 720
+VLVGGSTRIPK+QKLLQDFFNGKELNKSINPDE +L GDK E VQD
Sbjct: 336 VVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAVLMGDKCEKVQDLLL 395
Query: 721 XXXXXXXXGIETAGGVMTVLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKDN 900
G+ETAGGVMT LI+RN YSDNQPGV IQVYEGERAMTKDN
Sbjct: 396 LDVAPLSLGLETAGGVMTTLIQRNATIPTKQTQTFTTYSDNQPGVFIQVYEGERAMTKDN 455
Query: 901 NLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKE 1080
NLLG+FEL+GIPPAPRGVPQIEVTFDIDANGIL+V+A D+STGK NKITITNDKGRLSKE
Sbjct: 456 NLLGRFELSGIPPAPRGVPQIEVTFDIDANGILSVTATDRSTGKANKITITNDKGRLSKE 515
Query: 1081 DIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDK 1260
++ERMV EAE+YKAEDE QRD+V++KNSLE++ F++K ++++E L+ KI +ED++K+ DK
Sbjct: 516 EVERMVHEAEQYKAEDEAQRDRVAAKNSLEAHVFHVKGSLQEESLRDKIPEEDRRKMQDK 575
Query: 1261 CNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLY 1374
C E++ WL+ NQ AEKEE+EHQ++ELE++C PI ++LY
Sbjct: 576 CREVLAWLEHNQLAEKEEYEHQKRELEQICRPIFSRLY 613
>ref|NP_694881.1| heat shock cognate 71 kDa protein isoform 2 [Homo sapiens].
Length = 493
Score = 526 bits (1355), Expect = e-149
Identities = 278/320 (86%), Positives = 279/320 (87%), Gaps = 1/320 (0%)
Frame = +1
Query: 1 QRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFGVSILTIE 180
QRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTF VSILTIE
Sbjct: 154 QRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIE 213
Query: 181 DGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRT 360
DGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRT
Sbjct: 214 DGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRT 273
Query: 361 LSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHD 540
LSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHD
Sbjct: 274 LSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHD 333
Query: 541 IVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILSGDKSENVQDXXX 720
IVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDE ILSGDKSENVQD
Sbjct: 334 IVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLL 393
Query: 721 XXXXXXXXGIETAGGVMTVLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKDN 900
GIETAGGVMTVLIKRN YSDNQPGVLIQVYEGERAMTKDN
Sbjct: 394 LDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDN 453
Query: 901 NLLGKFELTGIPPA-PRGVP 957
NLLGKFELTG+P P G P
Sbjct: 454 NLLGKFELTGMPGGMPGGFP 473
>ref|NP_005338.1| 78 kDa glucose-regulated protein precursor [Homo sapiens].
Length = 654
Score = 525 bits (1351), Expect = e-149
Identities = 270/459 (58%), Positives = 344/459 (74%), Gaps = 1/459 (0%)
Frame = +1
Query: 1 QRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFGVSILTIE 180
QRQATKDAGTIAGLNV+RIINEPTAAAIAYGLDK+ G E+N+L+FDLGGGTF VS+LTI+
Sbjct: 180 QRQATKDAGTIAGLNVMRIINEPTAAAIAYGLDKREG-EKNILVFDLGGGTFDVSLLTID 238
Query: 181 DGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRT 360
+G+FEV +T GDTHLGGEDFD R++ HFI +K+K KD+ ++ RAV++LR E+AKR
Sbjct: 239 NGVFEVVATNGDTHLGGEDFDQRVMEHFIKLYKKKTGKDVRKDNRAVQKLRREVEKAKRA 298
Query: 361 LSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHD 540
LSS QA IEI+S YEG DF ++TRA+FEELN DLFR T+ PV+K L D+ L KS I +
Sbjct: 299 LSSQHQARIEIESFYEGEDFSETLTRAKFEELNMDLFRSTMKPVQKVLEDSDLKKSDIDE 358
Query: 541 IVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILSGDKSENVQDXXX 720
IVLVGGSTRIPKIQ+L+++FFNGKE ++ INPDE +LSGD ++ D
Sbjct: 359 IVLVGGSTRIPKIQQLVKEFFNGKEPSRGINPDEAVAYGAAVQAGVLSGD--QDTGDLVL 416
Query: 721 XXXXXXXXGIETAGGVMTVLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKDN 900
GIET GGVMT LI RN SDNQP V I+VYEGER +TKDN
Sbjct: 417 LDVCPLTLGIETVGGVMTKLIPRNTVVPTKKSQIFSTASDNQPTVTIKVYEGERPLTKDN 476
Query: 901 NLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKE 1080
+LLG F+LTGIPPAPRGVPQIEVTF+ID NGIL V+A DK TG +NKITITND+ RL+ E
Sbjct: 477 HLLGTFDLTGIPPAPRGVPQIEVTFEIDVNGILRVTAEDKGTGNKNKITITNDQNRLTPE 536
Query: 1081 DIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVED-EKLQGKINDEDKQKILD 1257
+IERMV +AEK+ ED+K ++++ ++N LESYA+++K + D EKL GK++ EDK+ +
Sbjct: 537 EIERMVNDAEKFAEEDKKLKERIDTRNELESYAYSLKNQIGDKEKLGGKLSSEDKETMEK 596
Query: 1258 KCNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLY 1374
E I WL+ +Q A+ E+F+ ++KELE++ PII+KLY
Sbjct: 597 AVEEKIEWLESHQDADIEDFKAKKKELEEIVQPIISKLY 635
>ref|NP_004125.3| stress-70 protein, mitochondrial precursor [Homo sapiens].
Length = 679
Score = 363 bits (931), Expect = e-100
Identities = 205/463 (44%), Positives = 286/463 (61%), Gaps = 4/463 (0%)
Frame = +1
Query: 1 QRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFGVSILTIE 180
QRQATKDAG I+GLNVLR+INEPTAAA+AYGLDK ++ + ++DLGGGTF +SIL I+
Sbjct: 201 QRQATKDAGQISGLNVLRVINEPTAAALAYGLDKS--EDKVIAVYDLGGGTFDISILEIQ 258
Query: 181 DGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRT 360
G+FEVKST GDT LGGEDFD ++ H + EFKR+ D++++ A++R+R A E+AK
Sbjct: 259 KGVFEVKSTNGDTFLGGEDFDQALLRHIVKEFKRETGVDLTKDNMALQRVREAAEKAKCE 318
Query: 361 LSSSTQASIEIDSLYEGID----FYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKS 528
LSSS Q I + L +TRA+FE + DL R T+ P +KA++DA++ KS
Sbjct: 319 LSSSVQTDINLPYLTMDSSGPKHLNMKLTRAQFEGIVTDLIRRTIAPCQKAMQDAEVSKS 378
Query: 529 QIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILSGDKSENVQ 708
I +++LVGG TR+PK+Q+ +QD F G+ +K++NPDE +L+GD V
Sbjct: 379 DIGEVILVGGMTRMPKVQQTVQDLF-GRAPSKAVNPDEAVAIGAAIQGGVLAGD----VT 433
Query: 709 DXXXXXXXXXXXGIETAGGVMTVLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAM 888
D GIET GGV T LI RN +D Q V I+V +GER M
Sbjct: 434 DVLLLDVTPLSLGIETLGGVFTKLINRNTTIPTKKSQVFSTAADGQTQVEIKVCQGEREM 493
Query: 889 TKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGR 1068
DN LLG+F L GIPPAPRGVPQIEVTFDIDANGI++VSA DK TG+E +I I G
Sbjct: 494 AGDNKLLGQFTLIGIPPAPRGVPQIEVTFDIDANGIVHVSAKDKGTGREQQIVI-QSSGG 552
Query: 1069 LSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQK 1248
LSK+DIE MV+ AEKY ED +++++V + N E + + +E+ K Q + ++ K
Sbjct: 553 LSKDDIENMVKNAEKYAEEDRRKKERVEAVNMAEGIIHDTETKMEEFKDQ--LPADECNK 610
Query: 1249 ILDKCNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQ 1377
+ ++ +++ L + + E L++ + Y+
Sbjct: 611 LKEEISKMRELLARKDSETGENIRQAASSLQQASLKLFEMAYK 653
>ref|NP_057383.2| heat shock 70 kDa protein 14 isoform 1 [Homo sapiens].
Length = 509
Score = 175 bits (443), Expect = 1e-43
Identities = 111/356 (31%), Positives = 180/356 (50%), Gaps = 6/356 (1%)
Frame = +1
Query: 1 QRQATKDAGTIAGLNVLRIINEPTAAAIAYGL--DKKVGAERNVLIFDLGGGTFGVSILT 174
Q+ A +A AG NVLR+I+EP+AA +AYG+ D G + N+L+F LGG + +S++
Sbjct: 151 QKNALGEAARAAGFNVLRLIHEPSAALLAYGIGQDSPTG-KSNILVFKLGGTSLSLSVME 209
Query: 175 IEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAK 354
+ GI+ V ST D ++GG F + + +EF+R K D+ N RA+ +L + E AK
Sbjct: 210 VNSGIYRVLSTNTDDNIGGAHFTETLAQYLASEFQRSFKHDVRGNARAMMKLTNSAEVAK 269
Query: 355 RTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQI 534
+LS+ A+ +DSLYEG DF +++RARFE L + LF ++ + L I
Sbjct: 270 HSLSTLGSANCFLDSLYEGQDFDCNVSRARFELLCSPLFNKCIEAIRGLLDQNGFTADDI 329
Query: 535 HDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILSGDKSENVQD- 711
+ +VL GGS+RIPK+Q+L++D F EL SI PDE IL G ++ V+D
Sbjct: 330 NKVVLCGGSSRIPKLQQLIKDLFPAVELLNSIPPDEVIPIGAAIEAGILIGKENLLVEDS 389
Query: 712 --XXXXXXXXXXXGIETAGGVMTVLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGE-R 882
G++ +G ++ + + V +++YE + +
Sbjct: 390 LMIECSARDILVKGVDESGASRFTVLFPSGTPLPARRQHTLQAPGSISSVCLELYESDGK 449
Query: 883 AMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITI 1050
K+ + L + G+ I + +G L+V+ D+ TGK I+I
Sbjct: 450 NSAKEETKFAQVVLQDLDKKENGLRDILAVLTMKRDGSLHVTCTDQETGKCEAISI 505
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 58,991,038
Number of extensions: 1509368
Number of successful extensions: 5917
Number of sequences better than 1.0e-05: 16
Number of HSP's gapped: 5821
Number of HSP's successfully gapped: 17
Length of query: 589
Length of database: 18,297,164
Length adjustment: 108
Effective length of query: 481
Effective length of database: 14,737,052
Effective search space: 7088522012
Effective search space used: 7088522012
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-001103
(1767 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_112442.2| heat shock cognate 71 kDa protein [Mus musculus]. 815 0.0
Alignment gi|NP_001002012.1| heat shock-related 70 kDa protein 2 [Mus mus... 730 0.0
Alignment gi|NP_032327.2| heat shock-related 70 kDa protein 2 [Mus muscul... 730 0.0
Alignment gi|NP_038586.2| heat shock 70 kDa protein 1-like [Mus musculus]. 717 0.0
Alignment gi|NP_034608.2| heat shock 70 kDa protein 1B [Mus musculus]. 715 0.0
Alignment gi|NP_034609.2| heat shock 70 kDa protein 1A [Mus musculus]. 715 0.0
Alignment gi|NP_001156906.1| 78 kDa glucose-regulated protein precursor [... 523 e-148
Alignment gi|NP_071705.3| 78 kDa glucose-regulated protein precursor [Mus... 523 e-148
Alignment gi|NP_034611.2| stress-70 protein, mitochondrial [Mus musculus]. 362 e-100
Alignment gi|NP_056580.2| heat shock 70 kDa protein 14 isoform 1 [Mus mus... 174 2e-43
>ref|NP_112442.2| heat shock cognate 71 kDa protein [Mus musculus].
Length = 646
Score = 815 bits (2105), Expect = 0.0
Identities = 428/493 (86%), Positives = 429/493 (87%)
Frame = +1
Query: 1 QRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFGVSILTIE 180
QRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTF VSILTIE
Sbjct: 154 QRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIE 213
Query: 181 DGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRT 360
DGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRT
Sbjct: 214 DGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRT 273
Query: 361 LSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHD 540
LSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHD
Sbjct: 274 LSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHD 333
Query: 541 IVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILSGDKSENVQDXXX 720
IVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDE ILSGDKSENVQD
Sbjct: 334 IVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLL 393
Query: 721 XXXXXXXXGIETAGGVMTVLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKDN 900
GIETAGGVMTVLIKRN YSDNQPGVLIQVYEGERAMTKDN
Sbjct: 394 LDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDN 453
Query: 901 NLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKE 1080
NLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKE
Sbjct: 454 NLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKE 513
Query: 1081 DIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDK 1260
DIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDK
Sbjct: 514 DIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDK 573
Query: 1261 CNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQXXXXXXXXXXXXXXXXXXXXX 1440
CNEII+WLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQ
Sbjct: 574 CNEIISWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQSAGGMPGGMPGGFPGGGAPPS 633
Query: 1441 XXXXXXXTIEEVD 1479
TIEEVD
Sbjct: 634 GGASSGPTIEEVD 646
>ref|NP_001002012.1| heat shock-related 70 kDa protein 2 [Mus musculus].
Length = 633
Score = 730 bits (1884), Expect = 0.0
Identities = 371/461 (80%), Positives = 401/461 (86%), Gaps = 2/461 (0%)
Frame = +1
Query: 1 QRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKK--VGAERNVLIFDLGGGTFGVSILT 174
QRQATKDAGTI GLNVLRIINEPTAAAIAYGLDKK G E+NVLIFDLGGGTF VSILT
Sbjct: 155 QRQATKDAGTITGLNVLRIINEPTAAAIAYGLDKKGCAGGEKNVLIFDLGGGTFDVSILT 214
Query: 175 IEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAK 354
IEDGIFEVKSTAGDTHLGGEDFDNRMV+H EFKRKHKKDI NKRAVRRLRTACERAK
Sbjct: 215 IEDGIFEVKSTAGDTHLGGEDFDNRMVSHLAEEFKRKHKKDIGPNKRAVRRLRTACERAK 274
Query: 355 RTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQI 534
RTLSSSTQASIEIDSLYEG+DFYTSITRARFEELNADLFRGTL+PVEKALRDAKLDK QI
Sbjct: 275 RTLSSSTQASIEIDSLYEGVDFYTSITRARFEELNADLFRGTLEPVEKALRDAKLDKGQI 334
Query: 535 HDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILSGDKSENVQDX 714
+IVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDE IL GDKSENVQD
Sbjct: 335 QEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILIGDKSENVQDL 394
Query: 715 XXXXXXXXXXGIETAGGVMTVLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTK 894
GIETAGGVMT LIKRN YSDNQ VL+QVYEGERAMTK
Sbjct: 395 LLLDVTPLSLGIETAGGVMTPLIKRNTTIPTKQTQTFTTYSDNQSSVLVQVYEGERAMTK 454
Query: 895 DNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLS 1074
DNNLLGKF+LTGIPPAPRGVPQIEVTFDIDANGILNV+A DKSTGKENKITITNDKGRLS
Sbjct: 455 DNNLLGKFDLTGIPPAPRGVPQIEVTFDIDANGILNVTAADKSTGKENKITITNDKGRLS 514
Query: 1075 KEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKIL 1254
K+DI+RMVQEAE+YK+EDE RD+V++KN++ESY +N+K TVEDEKL+GKI+++DK KIL
Sbjct: 515 KDDIDRMVQEAERYKSEDEANRDRVAAKNAVESYTYNIKQTVEDEKLRGKISEQDKNKIL 574
Query: 1255 DKCNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQ 1377
DKC E+INWLD+NQ AEK+E+EH+QKELE+VCNPII+KLYQ
Sbjct: 575 DKCQEVINWLDRNQMAEKDEYEHKQKELERVCNPIISKLYQ 615
>ref|NP_032327.2| heat shock-related 70 kDa protein 2 [Mus musculus].
Length = 633
Score = 730 bits (1884), Expect = 0.0
Identities = 371/461 (80%), Positives = 401/461 (86%), Gaps = 2/461 (0%)
Frame = +1
Query: 1 QRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKK--VGAERNVLIFDLGGGTFGVSILT 174
QRQATKDAGTI GLNVLRIINEPTAAAIAYGLDKK G E+NVLIFDLGGGTF VSILT
Sbjct: 155 QRQATKDAGTITGLNVLRIINEPTAAAIAYGLDKKGCAGGEKNVLIFDLGGGTFDVSILT 214
Query: 175 IEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAK 354
IEDGIFEVKSTAGDTHLGGEDFDNRMV+H EFKRKHKKDI NKRAVRRLRTACERAK
Sbjct: 215 IEDGIFEVKSTAGDTHLGGEDFDNRMVSHLAEEFKRKHKKDIGPNKRAVRRLRTACERAK 274
Query: 355 RTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQI 534
RTLSSSTQASIEIDSLYEG+DFYTSITRARFEELNADLFRGTL+PVEKALRDAKLDK QI
Sbjct: 275 RTLSSSTQASIEIDSLYEGVDFYTSITRARFEELNADLFRGTLEPVEKALRDAKLDKGQI 334
Query: 535 HDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILSGDKSENVQDX 714
+IVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDE IL GDKSENVQD
Sbjct: 335 QEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILIGDKSENVQDL 394
Query: 715 XXXXXXXXXXGIETAGGVMTVLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTK 894
GIETAGGVMT LIKRN YSDNQ VL+QVYEGERAMTK
Sbjct: 395 LLLDVTPLSLGIETAGGVMTPLIKRNTTIPTKQTQTFTTYSDNQSSVLVQVYEGERAMTK 454
Query: 895 DNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLS 1074
DNNLLGKF+LTGIPPAPRGVPQIEVTFDIDANGILNV+A DKSTGKENKITITNDKGRLS
Sbjct: 455 DNNLLGKFDLTGIPPAPRGVPQIEVTFDIDANGILNVTAADKSTGKENKITITNDKGRLS 514
Query: 1075 KEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKIL 1254
K+DI+RMVQEAE+YK+EDE RD+V++KN++ESY +N+K TVEDEKL+GKI+++DK KIL
Sbjct: 515 KDDIDRMVQEAERYKSEDEANRDRVAAKNAVESYTYNIKQTVEDEKLRGKISEQDKNKIL 574
Query: 1255 DKCNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQ 1377
DKC E+INWLD+NQ AEK+E+EH+QKELE+VCNPII+KLYQ
Sbjct: 575 DKCQEVINWLDRNQMAEKDEYEHKQKELERVCNPIISKLYQ 615
>ref|NP_038586.2| heat shock 70 kDa protein 1-like [Mus musculus].
Length = 641
Score = 717 bits (1852), Expect = 0.0
Identities = 359/459 (78%), Positives = 404/459 (88%)
Frame = +1
Query: 1 QRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFGVSILTIE 180
QRQATKDAG IAGLNVLRIINEPTAAAIAYGLDK ER+VLIFDLGGGTF VSILTI+
Sbjct: 156 QRQATKDAGVIAGLNVLRIINEPTAAAIAYGLDKGSHGERHVLIFDLGGGTFDVSILTID 215
Query: 181 DGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRT 360
DGIFEVK+TAGDTHLGGEDFDNR+V+HF+ EFKRKHKKDIS+NKRAVRRLRTACERAKRT
Sbjct: 216 DGIFEVKATAGDTHLGGEDFDNRLVSHFVEEFKRKHKKDISQNKRAVRRLRTACERAKRT 275
Query: 361 LSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHD 540
LSSSTQA++EIDSLYEGIDFYTSITRARFEEL ADLFRGTL+PVEK+LRDAK+DK++IHD
Sbjct: 276 LSSSTQANLEIDSLYEGIDFYTSITRARFEELCADLFRGTLEPVEKSLRDAKMDKAKIHD 335
Query: 541 IVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILSGDKSENVQDXXX 720
IVLVGGSTRIPK+QKLLQD+FNG++LNKSINPDE IL GDKSE VQD
Sbjct: 336 IVLVGGSTRIPKVQKLLQDYFNGRDLNKSINPDEAVAYGAAVQAAILMGDKSEKVQDLLL 395
Query: 721 XXXXXXXXGIETAGGVMTVLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKDN 900
G+ETAGGVMTVLIKRN YSDNQPGVLIQVYEGERAMT+DN
Sbjct: 396 LDVAPLSLGLETAGGVMTVLIKRNSTIPTKQTQIFTTYSDNQPGVLIQVYEGERAMTRDN 455
Query: 901 NLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKE 1080
NLLG+F+LTGIPPAPRGVPQIEVTFDIDANGILNV+A+DKSTGK NKITITNDKGRLSKE
Sbjct: 456 NLLGRFDLTGIPPAPRGVPQIEVTFDIDANGILNVTAMDKSTGKANKITITNDKGRLSKE 515
Query: 1081 DIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDK 1260
+IERMVQEAE+YKAEDE QR+K+++KN+LESYAFNMK+ V DE L+ KI++ DK+KILDK
Sbjct: 516 EIERMVQEAERYKAEDEGQREKIAAKNALESYAFNMKSAVGDEGLKDKISESDKKKILDK 575
Query: 1261 CNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQ 1377
CNE+++WL+ NQ AEK+EF+H++KELE +CNPIITKLYQ
Sbjct: 576 CNEVLSWLEANQLAEKDEFDHKRKELENMCNPIITKLYQ 614
>ref|NP_034608.2| heat shock 70 kDa protein 1B [Mus musculus].
Length = 642
Score = 715 bits (1846), Expect = 0.0
Identities = 358/459 (77%), Positives = 402/459 (87%)
Frame = +1
Query: 1 QRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFGVSILTIE 180
QRQATKDAG IAGLNVLRIINEPTAAAIAYGLD+ ERNVLIFDLGGGTF VSILTI+
Sbjct: 154 QRQATKDAGVIAGLNVLRIINEPTAAAIAYGLDRTGKGERNVLIFDLGGGTFDVSILTID 213
Query: 181 DGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRT 360
DGIFEVK+TAGDTHLGGEDFDNR+V+HF+ EFKRKHKKDIS+NKRAVRRLRTACERAKRT
Sbjct: 214 DGIFEVKATAGDTHLGGEDFDNRLVSHFVEEFKRKHKKDISQNKRAVRRLRTACERAKRT 273
Query: 361 LSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHD 540
LSSSTQAS+EIDSL+EGIDFYTSITRARFEEL +DLFRGTL+PVEKALRDAK+DK+QIHD
Sbjct: 274 LSSSTQASLEIDSLFEGIDFYTSITRARFEELCSDLFRGTLEPVEKALRDAKMDKAQIHD 333
Query: 541 IVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILSGDKSENVQDXXX 720
+VLVGGSTRIPK+QKLLQDFFNG++LNKSINPDE IL GDKSENVQD
Sbjct: 334 LVLVGGSTRIPKVQKLLQDFFNGRDLNKSINPDEAVAYGAAVQAAILMGDKSENVQDLLL 393
Query: 721 XXXXXXXXGIETAGGVMTVLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKDN 900
G+ETAGGVMT LIKRN YSDNQPGVLIQVYEGERAMT+DN
Sbjct: 394 LDVAPLSLGLETAGGVMTALIKRNSTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTRDN 453
Query: 901 NLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKE 1080
NLLG+FEL+GIPPAPRGVPQIEVTFDIDANGILNV+A DKSTGK NKITITNDKGRLSKE
Sbjct: 454 NLLGRFELSGIPPAPRGVPQIEVTFDIDANGILNVTATDKSTGKANKITITNDKGRLSKE 513
Query: 1081 DIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDK 1260
+IERMVQEAE+YKAEDE QRD+V++KN+LESYAFNMK+ VEDE L+GK+++ DK+K+LDK
Sbjct: 514 EIERMVQEAERYKAEDEVQRDRVAAKNALESYAFNMKSAVEDEGLKGKLSEADKKKVLDK 573
Query: 1261 CNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQ 1377
C E+I+WLD N A+KEEF H+++ELE+VC+PII+ LYQ
Sbjct: 574 CQEVISWLDSNTLADKEEFVHKREELERVCSPIISGLYQ 612
>ref|NP_034609.2| heat shock 70 kDa protein 1A [Mus musculus].
Length = 641
Score = 715 bits (1846), Expect = 0.0
Identities = 358/459 (77%), Positives = 402/459 (87%)
Frame = +1
Query: 1 QRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFGVSILTIE 180
QRQATKDAG IAGLNVLRIINEPTAAAIAYGLD+ ERNVLIFDLGGGTF VSILTI+
Sbjct: 154 QRQATKDAGVIAGLNVLRIINEPTAAAIAYGLDRTGKGERNVLIFDLGGGTFDVSILTID 213
Query: 181 DGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRT 360
DGIFEVK+TAGDTHLGGEDFDNR+V+HF+ EFKRKHKKDIS+NKRAVRRLRTACERAKRT
Sbjct: 214 DGIFEVKATAGDTHLGGEDFDNRLVSHFVEEFKRKHKKDISQNKRAVRRLRTACERAKRT 273
Query: 361 LSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHD 540
LSSSTQAS+EIDSL+EGIDFYTSITRARFEEL +DLFRGTL+PVEKALRDAK+DK+QIHD
Sbjct: 274 LSSSTQASLEIDSLFEGIDFYTSITRARFEELCSDLFRGTLEPVEKALRDAKMDKAQIHD 333
Query: 541 IVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILSGDKSENVQDXXX 720
+VLVGGSTRIPK+QKLLQDFFNG++LNKSINPDE IL GDKSENVQD
Sbjct: 334 LVLVGGSTRIPKVQKLLQDFFNGRDLNKSINPDEAVAYGAAVQAAILMGDKSENVQDLLL 393
Query: 721 XXXXXXXXGIETAGGVMTVLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKDN 900
G+ETAGGVMT LIKRN YSDNQPGVLIQVYEGERAMT+DN
Sbjct: 394 LDVAPLSLGLETAGGVMTALIKRNSTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTRDN 453
Query: 901 NLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKE 1080
NLLG+FEL+GIPPAPRGVPQIEVTFDIDANGILNV+A DKSTGK NKITITNDKGRLSKE
Sbjct: 454 NLLGRFELSGIPPAPRGVPQIEVTFDIDANGILNVTATDKSTGKANKITITNDKGRLSKE 513
Query: 1081 DIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDK 1260
+IERMVQEAE+YKAEDE QRD+V++KN+LESYAFNMK+ VEDE L+GK+++ DK+K+LDK
Sbjct: 514 EIERMVQEAERYKAEDEVQRDRVAAKNALESYAFNMKSAVEDEGLKGKLSEADKKKVLDK 573
Query: 1261 CNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQ 1377
C E+I+WLD N A+KEEF H+++ELE+VC+PII+ LYQ
Sbjct: 574 CQEVISWLDSNTLADKEEFVHKREELERVCSPIISGLYQ 612
>ref|NP_001156906.1| 78 kDa glucose-regulated protein precursor [Mus musculus].
Length = 655
Score = 523 bits (1347), Expect = e-148
Identities = 269/459 (58%), Positives = 344/459 (74%), Gaps = 1/459 (0%)
Frame = +1
Query: 1 QRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFGVSILTIE 180
QRQATKDAGTIAGLNV+RIINEPTAAAIAYGLDK+ G E+N+L+FDLGGGTF VS+LTI+
Sbjct: 181 QRQATKDAGTIAGLNVMRIINEPTAAAIAYGLDKREG-EKNILVFDLGGGTFDVSLLTID 239
Query: 181 DGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRT 360
+G+FEV +T GDTHLGGEDFD R++ HFI +K+K KD+ ++ RAV++LR E+AKR
Sbjct: 240 NGVFEVVATNGDTHLGGEDFDQRVMEHFIKLYKKKTGKDVRKDNRAVQKLRREVEKAKRA 299
Query: 361 LSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHD 540
LSS QA IEI+S +EG DF ++TRA+FEELN DLFR T+ PV+K L D+ L KS I +
Sbjct: 300 LSSQHQARIEIESFFEGEDFSETLTRAKFEELNMDLFRSTMKPVQKVLEDSDLKKSDIDE 359
Query: 541 IVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILSGDKSENVQDXXX 720
IVLVGGSTRIPKIQ+L+++FFNGKE ++ INPDE +LSGD ++ D
Sbjct: 360 IVLVGGSTRIPKIQQLVKEFFNGKEPSRGINPDEAVAYGAAVQAGVLSGD--QDTGDLVL 417
Query: 721 XXXXXXXXGIETAGGVMTVLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKDN 900
GIET GGVMT LI RN SDNQP V I+VYEGER +TKDN
Sbjct: 418 LDVCPLTLGIETVGGVMTKLIPRNTVVPTKKSQIFSTASDNQPTVTIKVYEGERPLTKDN 477
Query: 901 NLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKE 1080
+LLG F+LTGIPPAPRGVPQIEVTF+ID NGIL V+A DK TG +NKITITND+ RL+ E
Sbjct: 478 HLLGTFDLTGIPPAPRGVPQIEVTFEIDVNGILRVTAEDKGTGNKNKITITNDQNRLTPE 537
Query: 1081 DIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVED-EKLQGKINDEDKQKILD 1257
+IERMV +AEK+ ED+K ++++ ++N LESYA+++K + D EKL GK++ EDK+ +
Sbjct: 538 EIERMVNDAEKFAEEDKKLKERIDTRNELESYAYSLKNQIGDKEKLGGKLSSEDKETMEK 597
Query: 1258 KCNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLY 1374
E I WL+ +Q A+ E+F+ ++KELE++ PII+KLY
Sbjct: 598 AVEEKIEWLESHQDADIEDFKAKKKELEEIVQPIISKLY 636
>ref|NP_071705.3| 78 kDa glucose-regulated protein precursor [Mus musculus].
Length = 655
Score = 523 bits (1347), Expect = e-148
Identities = 269/459 (58%), Positives = 344/459 (74%), Gaps = 1/459 (0%)
Frame = +1
Query: 1 QRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFGVSILTIE 180
QRQATKDAGTIAGLNV+RIINEPTAAAIAYGLDK+ G E+N+L+FDLGGGTF VS+LTI+
Sbjct: 181 QRQATKDAGTIAGLNVMRIINEPTAAAIAYGLDKREG-EKNILVFDLGGGTFDVSLLTID 239
Query: 181 DGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRT 360
+G+FEV +T GDTHLGGEDFD R++ HFI +K+K KD+ ++ RAV++LR E+AKR
Sbjct: 240 NGVFEVVATNGDTHLGGEDFDQRVMEHFIKLYKKKTGKDVRKDNRAVQKLRREVEKAKRA 299
Query: 361 LSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHD 540
LSS QA IEI+S +EG DF ++TRA+FEELN DLFR T+ PV+K L D+ L KS I +
Sbjct: 300 LSSQHQARIEIESFFEGEDFSETLTRAKFEELNMDLFRSTMKPVQKVLEDSDLKKSDIDE 359
Query: 541 IVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILSGDKSENVQDXXX 720
IVLVGGSTRIPKIQ+L+++FFNGKE ++ INPDE +LSGD ++ D
Sbjct: 360 IVLVGGSTRIPKIQQLVKEFFNGKEPSRGINPDEAVAYGAAVQAGVLSGD--QDTGDLVL 417
Query: 721 XXXXXXXXGIETAGGVMTVLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKDN 900
GIET GGVMT LI RN SDNQP V I+VYEGER +TKDN
Sbjct: 418 LDVCPLTLGIETVGGVMTKLIPRNTVVPTKKSQIFSTASDNQPTVTIKVYEGERPLTKDN 477
Query: 901 NLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKE 1080
+LLG F+LTGIPPAPRGVPQIEVTF+ID NGIL V+A DK TG +NKITITND+ RL+ E
Sbjct: 478 HLLGTFDLTGIPPAPRGVPQIEVTFEIDVNGILRVTAEDKGTGNKNKITITNDQNRLTPE 537
Query: 1081 DIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVED-EKLQGKINDEDKQKILD 1257
+IERMV +AEK+ ED+K ++++ ++N LESYA+++K + D EKL GK++ EDK+ +
Sbjct: 538 EIERMVNDAEKFAEEDKKLKERIDTRNELESYAYSLKNQIGDKEKLGGKLSSEDKETMEK 597
Query: 1258 KCNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLY 1374
E I WL+ +Q A+ E+F+ ++KELE++ PII+KLY
Sbjct: 598 AVEEKIEWLESHQDADIEDFKAKKKELEEIVQPIISKLY 636
>ref|NP_034611.2| stress-70 protein, mitochondrial [Mus musculus].
Length = 679
Score = 362 bits (928), Expect = e-100
Identities = 203/434 (46%), Positives = 274/434 (63%), Gaps = 4/434 (0%)
Frame = +1
Query: 1 QRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFGVSILTIE 180
QRQATKDAG I+GLNVLR+INEPTAAA+AYGLDK ++ + ++DLGGGTF +SIL I+
Sbjct: 201 QRQATKDAGQISGLNVLRVINEPTAAALAYGLDKS--EDKVIAVYDLGGGTFDISILEIQ 258
Query: 181 DGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRT 360
G+FEVKST GDT LGGEDFD ++ H + EFKR+ D++++ A++R+R A E+AK
Sbjct: 259 KGVFEVKSTNGDTFLGGEDFDQALLRHIVKEFKRETGVDLTKDNMALQRVREAAEKAKCE 318
Query: 361 LSSSTQASIEIDSLYEGID----FYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKS 528
LSSS Q I + L +TRA+FE + DL + T+ P +KA++DA++ KS
Sbjct: 319 LSSSVQTDINLPYLTMDASGPKHLNMKLTRAQFEGIVTDLIKRTIAPCQKAMQDAEVSKS 378
Query: 529 QIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILSGDKSENVQ 708
I +++LVGG TR+PK+Q+ +QD F G+ +K++NPDE +L+GD V
Sbjct: 379 DIGEVILVGGMTRMPKVQQTVQDLF-GRAPSKAVNPDEAVAIGAAIQGGVLAGD----VT 433
Query: 709 DXXXXXXXXXXXGIETAGGVMTVLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAM 888
D GIET GGV T LI RN +D Q V I+V +GER M
Sbjct: 434 DVLLLDVTPLSLGIETLGGVFTKLINRNTTIPTKKSQVFSTAADGQTQVEIKVCQGEREM 493
Query: 889 TKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGR 1068
DN LLG+F L GIPPAPRGVPQIEVTFDIDANGI++VSA DK TG+E +I I G
Sbjct: 494 AGDNKLLGQFTLIGIPPAPRGVPQIEVTFDIDANGIVHVSAKDKGTGREQQIVI-QSSGG 552
Query: 1069 LSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQK 1248
LSK+DIE MV+ AEKY ED +++++V + N E + + +E+ K Q
Sbjct: 553 LSKDDIENMVKNAEKYAEEDRRKKERVEAVNMAEGIIHDTETKMEEFK---------DQL 603
Query: 1249 ILDKCNEIINWLDK 1290
D+CN++ + K
Sbjct: 604 PADECNKLKEEISK 617
>ref|NP_056580.2| heat shock 70 kDa protein 14 isoform 1 [Mus musculus].
Length = 509
Score = 174 bits (441), Expect = 2e-43
Identities = 111/356 (31%), Positives = 178/356 (50%), Gaps = 6/356 (1%)
Frame = +1
Query: 1 QRQATKDAGTIAGLNVLRIINEPTAAAIAYGL--DKKVGAERNVLIFDLGGGTFGVSILT 174
Q+ A +A AG NVLR+I+EP+AA +AYG+ D G + NVL+F LGG + +S++
Sbjct: 151 QKSALGEAAGAAGFNVLRLIHEPSAALLAYGIGQDHPTG-KSNVLVFKLGGTSLSLSVME 209
Query: 175 IEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAK 354
+ G++ V ST ++GG F + + + +EF+R K D+ N RA+ +L + E AK
Sbjct: 210 VNSGMYRVLSTNTSDNIGGAHFTDTLAQYLASEFQRLFKHDVRGNARAMMKLMNSAEVAK 269
Query: 355 RTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQI 534
+LS+ A+ +DSLYEG DF +++RARFE L + LF + + + LR I
Sbjct: 270 HSLSTLGSANCFVDSLYEGQDFDCNVSRARFELLCSPLFNKCTEAIRELLRQTGFTADDI 329
Query: 535 HDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILSGDKSENVQD- 711
+ +VL GGS+RIPK+Q+L++D F +L SI PDE IL G +S + D
Sbjct: 330 NKVVLCGGSSRIPKLQQLIKDLFPAVDLLNSIPPDEVIPIGAAIEAGILVGKESTSGDDS 389
Query: 712 --XXXXXXXXXXXGIETAGGVMTVLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGE-R 882
G++ +G ++ + V +++YE E +
Sbjct: 390 VMIECSAKDILVKGVDESGADRFTVLFPSGTPLPARRQHTLQAPGRVSSVCLELYESEGK 449
Query: 883 AMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITI 1050
K+ + L + G+ I + +G L V+ D+ TGK IT+
Sbjct: 450 NSAKEEAKFAQVVLQDLDKKENGLRDILAVLTMKRDGSLQVTCTDQDTGKCEAITV 505
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 50,274,787
Number of extensions: 1271634
Number of successful extensions: 4913
Number of sequences better than 1.0e-05: 15
Number of HSP's gapped: 4792
Number of HSP's successfully gapped: 16
Length of query: 589
Length of database: 15,617,559
Length adjustment: 107
Effective length of query: 482
Effective length of database: 12,403,707
Effective search space: 5978586774
Effective search space used: 5978586774
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-001103
(1767 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001230836.1| heat shock 70kDa protein 8 [Sus scrofa]. 817 0.0
Alignment gi|XP_003130009.2| PREDICTED: heat shock cognate 71 kDa protein... 753 0.0
Alignment gi|XP_003356782.1| PREDICTED: heat shock-related 70 kDa protein... 730 0.0
Alignment gi|NP_998931.1| heat shock 70 kDa protein 1B [Sus scrofa]. 722 0.0
Alignment gi|NP_001116600.1| heat shock 70 kDa protein 1-like [Sus scrofa]. 716 0.0
Alignment gi|NP_001116599.1| heat shock 70 kDa protein [Sus scrofa]. 680 0.0
Alignment gi|XP_001927830.2| PREDICTED: 78 kDa glucose-regulated protein ... 525 e-149
Alignment gi|XP_003124024.1| PREDICTED: stress-70 protein, mitochondrial ... 361 e-100
Alignment gi|NP_001230322.1| heat shock 70 kDa protein 14 [Sus scrofa]. 176 3e-44
Alignment gi|XP_003361557.1| PREDICTED: heat shock 70 kDa protein 14-like... 171 9e-43
>ref|NP_001230836.1| heat shock 70kDa protein 8 [Sus scrofa].
Length = 646
Score = 817 bits (2110), Expect = 0.0
Identities = 429/493 (87%), Positives = 429/493 (87%)
Frame = +1
Query: 1 QRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFGVSILTIE 180
QRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTF VSILTIE
Sbjct: 154 QRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIE 213
Query: 181 DGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRT 360
DGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRT
Sbjct: 214 DGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRT 273
Query: 361 LSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHD 540
LSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHD
Sbjct: 274 LSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHD 333
Query: 541 IVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILSGDKSENVQDXXX 720
IVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDE ILSGDKSENVQD
Sbjct: 334 IVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLL 393
Query: 721 XXXXXXXXGIETAGGVMTVLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKDN 900
GIETAGGVMTVLIKRN YSDNQPGVLIQVYEGERAMTKDN
Sbjct: 394 LDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDN 453
Query: 901 NLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKE 1080
NLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKE
Sbjct: 454 NLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKE 513
Query: 1081 DIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDK 1260
DIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDK
Sbjct: 514 DIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDK 573
Query: 1261 CNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQXXXXXXXXXXXXXXXXXXXXX 1440
CNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQ
Sbjct: 574 CNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQSAGGMPGGMPGGFPGGGAPPS 633
Query: 1441 XXXXXXXTIEEVD 1479
TIEEVD
Sbjct: 634 GGASSGPTIEEVD 646
>ref|XP_003130009.2| PREDICTED: heat shock cognate 71 kDa protein-like [Sus scrofa].
Length = 599
Score = 753 bits (1944), Expect = 0.0
Identities = 395/459 (86%), Positives = 395/459 (86%)
Frame = +1
Query: 103 KVGAERNVLIFDLGGGTFGVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKR 282
KVGAERNVLIFDLGGGTF VSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKR
Sbjct: 141 KVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKR 200
Query: 283 KHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNA 462
KHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNA
Sbjct: 201 KHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNA 260
Query: 463 DLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDE 642
DLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDE
Sbjct: 261 DLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDE 320
Query: 643 XXXXXXXXXXXILSGDKSENVQDXXXXXXXXXXXGIETAGGVMTVLIKRNXXXXXXXXXX 822
ILSGDKSENVQD GIETAGGVMTVLIKRN
Sbjct: 321 AVAYGAAVQAAILSGDKSENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQT 380
Query: 823 XXXYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILN 1002
YSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILN
Sbjct: 381 FTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILN 440
Query: 1003 VSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAF 1182
VSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAF
Sbjct: 441 VSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAF 500
Query: 1183 NMKATVEDEKLQGKINDEDKQKILDKCNEIINWLDKNQTAEKEEFEHQQKELEKVCNPII 1362
NMKATVEDEKLQGKINDEDKQKILDKCNEIINWLDKNQTAEKEEFEHQQKELEKVCNPII
Sbjct: 501 NMKATVEDEKLQGKINDEDKQKILDKCNEIINWLDKNQTAEKEEFEHQQKELEKVCNPII 560
Query: 1363 TKLYQXXXXXXXXXXXXXXXXXXXXXXXXXXXXTIEEVD 1479
TKLYQ TIEEVD
Sbjct: 561 TKLYQSAGGMPGGMPGGFPGGGAPPSGGASSGPTIEEVD 599
>ref|XP_003356782.1| PREDICTED: heat shock-related 70 kDa protein 2-like [Sus scrofa].
Length = 636
Score = 730 bits (1884), Expect = 0.0
Identities = 371/461 (80%), Positives = 401/461 (86%), Gaps = 2/461 (0%)
Frame = +1
Query: 1 QRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKK--VGAERNVLIFDLGGGTFGVSILT 174
QRQATKDAGTI GLNVLRIINEPTAAAIAYGLDKK G E+NVLIFDLGGGTF VSILT
Sbjct: 155 QRQATKDAGTITGLNVLRIINEPTAAAIAYGLDKKGCAGGEKNVLIFDLGGGTFDVSILT 214
Query: 175 IEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAK 354
IEDGIFEVKSTAGDTHLGGEDFDNRMV+H EFKRKHKKDI NKRAVRRLRTACERAK
Sbjct: 215 IEDGIFEVKSTAGDTHLGGEDFDNRMVSHLAEEFKRKHKKDIGPNKRAVRRLRTACERAK 274
Query: 355 RTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQI 534
RTLSSSTQASIEIDSLYEG+DFYTSITRARFEELNADLFRGTL+PVEKALRDAKLDK QI
Sbjct: 275 RTLSSSTQASIEIDSLYEGVDFYTSITRARFEELNADLFRGTLEPVEKALRDAKLDKGQI 334
Query: 535 HDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILSGDKSENVQDX 714
+IVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDE IL GDKSENVQD
Sbjct: 335 QEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILIGDKSENVQDL 394
Query: 715 XXXXXXXXXXGIETAGGVMTVLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTK 894
GIETAGGVMT LIKRN YSDNQ VL+QVYEGERAMTK
Sbjct: 395 LLLDVTPLSLGIETAGGVMTPLIKRNTTIPTKQTQTFTTYSDNQSSVLVQVYEGERAMTK 454
Query: 895 DNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLS 1074
DNNLLGKF+LTGIPPAPRGVPQIEVTFDIDANGILNV+A DKSTGKENKITITNDKGRLS
Sbjct: 455 DNNLLGKFDLTGIPPAPRGVPQIEVTFDIDANGILNVTAADKSTGKENKITITNDKGRLS 514
Query: 1075 KEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKIL 1254
K+DI+RMVQEAE+YK+EDE RD+V++KN++ESY +N+K TVEDEKL+GKI+++DK KIL
Sbjct: 515 KDDIDRMVQEAERYKSEDEANRDRVAAKNAVESYTYNIKQTVEDEKLRGKISEQDKNKIL 574
Query: 1255 DKCNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQ 1377
DKC E+INWLD+NQ AEK+E+EH+QKELE+VCNPII+KLYQ
Sbjct: 575 DKCQEVINWLDRNQMAEKDEYEHKQKELERVCNPIISKLYQ 615
>ref|NP_998931.1| heat shock 70 kDa protein 1B [Sus scrofa].
Length = 641
Score = 722 bits (1864), Expect = 0.0
Identities = 364/459 (79%), Positives = 402/459 (87%)
Frame = +1
Query: 1 QRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFGVSILTIE 180
QRQATKDAG IAGLNVLRIINEPTAAAIAYGLD+ ERNVLIFDLGGGTF VSILTI+
Sbjct: 154 QRQATKDAGVIAGLNVLRIINEPTAAAIAYGLDRTGKGERNVLIFDLGGGTFDVSILTID 213
Query: 181 DGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRT 360
DGIFEVK+TAGDTHLGGEDFDNR+VNHF+ EFKRKHKKDIS+NKRAVRRLRTACERAKRT
Sbjct: 214 DGIFEVKATAGDTHLGGEDFDNRLVNHFVEEFKRKHKKDISQNKRAVRRLRTACERAKRT 273
Query: 361 LSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHD 540
LSSSTQAS+EIDSL+EGIDFYTSITRARFEEL +DLFR TL+PVEKALRDAKLDK+QIHD
Sbjct: 274 LSSSTQASLEIDSLFEGIDFYTSITRARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHD 333
Query: 541 IVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILSGDKSENVQDXXX 720
+VLVGGSTRIPK+QKLLQDFFNG++LNKSINPDE IL GDKSENVQD
Sbjct: 334 LVLVGGSTRIPKVQKLLQDFFNGRDLNKSINPDEAVAYGAAVQAAILMGDKSENVQDLLL 393
Query: 721 XXXXXXXXGIETAGGVMTVLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKDN 900
G+ETAGGVMT LIKRN YSDNQPGVLIQVYEGERAMT+DN
Sbjct: 394 LDVAPLSLGLETAGGVMTALIKRNSTIPTKQTQIFTTYSDNQPGVLIQVYEGERAMTRDN 453
Query: 901 NLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKE 1080
NLLG+FEL+GIPPAPRGVPQIEVTFDIDANGILNV+A DKSTGK NKITITNDKGRLSKE
Sbjct: 454 NLLGRFELSGIPPAPRGVPQIEVTFDIDANGILNVTATDKSTGKANKITITNDKGRLSKE 513
Query: 1081 DIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDK 1260
+IERMVQEAEKYKAEDE QR++VS+KN+LESYAFNMK+ VEDE L+GKI++ DK+K+LDK
Sbjct: 514 EIERMVQEAEKYKAEDEIQRERVSAKNALESYAFNMKSAVEDEGLKGKISEADKKKVLDK 573
Query: 1261 CNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQ 1377
C E+I+WLD N AEK+EFEH++KELE+VCNPII+ LYQ
Sbjct: 574 CQEVISWLDANTLAEKDEFEHKRKELEQVCNPIISGLYQ 612
>ref|NP_001116600.1| heat shock 70 kDa protein 1-like [Sus scrofa].
Length = 641
Score = 716 bits (1848), Expect = 0.0
Identities = 359/459 (78%), Positives = 403/459 (87%)
Frame = +1
Query: 1 QRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFGVSILTIE 180
QRQATKDAG IAGLNVLRIINEPTAAAIAYGLDK ER+VLIFDLGGGTF VSILTI+
Sbjct: 156 QRQATKDAGVIAGLNVLRIINEPTAAAIAYGLDKAGQGERHVLIFDLGGGTFDVSILTID 215
Query: 181 DGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRT 360
DGIFEVK+TAGDTHLGGEDFDNR+V+HF+ EFKRKHKKDIS+NKRAVRRLRTACERAKRT
Sbjct: 216 DGIFEVKATAGDTHLGGEDFDNRLVSHFVEEFKRKHKKDISQNKRAVRRLRTACERAKRT 275
Query: 361 LSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHD 540
LSSSTQA++EIDSLYEGIDFYTSITRARFEEL ADLFRGTL+PVEKALRDAK+DK++IHD
Sbjct: 276 LSSSTQANLEIDSLYEGIDFYTSITRARFEELCADLFRGTLEPVEKALRDAKMDKAKIHD 335
Query: 541 IVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILSGDKSENVQDXXX 720
IVLVGGSTRIPK+Q+LLQD+FNG++LNKSINPDE IL GDKSE VQD
Sbjct: 336 IVLVGGSTRIPKVQRLLQDYFNGRDLNKSINPDEAVAYGAAVQAAILMGDKSEKVQDLLL 395
Query: 721 XXXXXXXXGIETAGGVMTVLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKDN 900
G+ETAGGVMTVLIKRN YSDNQPGVLIQVYEGERAMT+DN
Sbjct: 396 LDVAPLSLGLETAGGVMTVLIKRNSTIPTKQTQIFTTYSDNQPGVLIQVYEGERAMTRDN 455
Query: 901 NLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKE 1080
NLLG+F+LTGIPPAPRGVPQIEVTFDIDANGILNV+A DKSTGK NKITITNDKGRLSKE
Sbjct: 456 NLLGRFDLTGIPPAPRGVPQIEVTFDIDANGILNVTATDKSTGKANKITITNDKGRLSKE 515
Query: 1081 DIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDK 1260
+IERMV +AEKYKAEDE QR+K+++KN+LESYAFNMK+ V DE L+GKI+D DK+KIL+K
Sbjct: 516 EIERMVLDAEKYKAEDEVQREKIAAKNALESYAFNMKSAVSDEGLKGKISDADKKKILNK 575
Query: 1261 CNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQ 1377
CNE ++WL+ NQ AEK+EF+H+++ELE+VCNPIITKLYQ
Sbjct: 576 CNEALSWLEANQLAEKDEFDHKRRELEQVCNPIITKLYQ 614
>ref|NP_001116599.1| heat shock 70 kDa protein [Sus scrofa].
Length = 643
Score = 680 bits (1754), Expect = 0.0
Identities = 333/458 (72%), Positives = 391/458 (85%)
Frame = +1
Query: 1 QRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFGVSILTIE 180
QRQATKDAG IAGLNVLRIINEPTAAAIAYGLD++ ERNVLIFDLGGGTF VS+LTI+
Sbjct: 156 QRQATKDAGAIAGLNVLRIINEPTAAAIAYGLDRRGAGERNVLIFDLGGGTFDVSVLTID 215
Query: 181 DGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRT 360
G+FEVK+TAGDTHLGGEDFDNR+VNHF+ EF+RKH+KD+S NKRA+RRLRTACERAKRT
Sbjct: 216 AGVFEVKATAGDTHLGGEDFDNRLVNHFMEEFRRKHRKDLSRNKRALRRLRTACERAKRT 275
Query: 361 LSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHD 540
LSSSTQA++EIDSL+EG+DFYTSITRARFEEL +DLFR TL+PVEKALRDAKLDK+QIHD
Sbjct: 276 LSSSTQATLEIDSLFEGVDFYTSITRARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHD 335
Query: 541 IVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILSGDKSENVQDXXX 720
IVLVGGSTRIPKIQKLLQDFFNG+ELNKSINPDE +L GDK E VQD
Sbjct: 336 IVLVGGSTRIPKIQKLLQDFFNGRELNKSINPDEAVAYGAAVQAAVLMGDKCEKVQDLLL 395
Query: 721 XXXXXXXXGIETAGGVMTVLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKDN 900
G+ETAGGVMT LI+RN YSDNQPGVLIQVYEGERAMT+DN
Sbjct: 396 LDVAPLSLGLETAGGVMTTLIQRNATIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTRDN 455
Query: 901 NLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKE 1080
NLLG+FEL+GIPPAPRGVPQIEVTFDIDANGIL+V+A D+STG+ NKITITNDKGRLSKE
Sbjct: 456 NLLGRFELSGIPPAPRGVPQIEVTFDIDANGILSVTATDRSTGRANKITITNDKGRLSKE 515
Query: 1081 DIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDK 1260
++ERMV+EA++YK EDE QRD+V++KNSLE+Y F++K ++ +E L+ KI +ED+ K+ DK
Sbjct: 516 EVERMVREADEYKVEDEAQRDRVAAKNSLEAYVFHVKGSLHEESLRDKIPEEDRCKVQDK 575
Query: 1261 CNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLY 1374
C E++ WL+ NQ AEKEE+EHQ++ELE++C PI ++LY
Sbjct: 576 CQEVLTWLEHNQLAEKEEYEHQKRELEQICRPIFSRLY 613
>ref|XP_001927830.2| PREDICTED: 78 kDa glucose-regulated protein [Sus scrofa].
Length = 675
Score = 525 bits (1351), Expect = e-149
Identities = 270/459 (58%), Positives = 344/459 (74%), Gaps = 1/459 (0%)
Frame = +1
Query: 1 QRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFGVSILTIE 180
QRQATKDAGTIAGLNV+RIINEPTAAAIAYGLDK+ G E+N+L+FDLGGGTF VS+LTI+
Sbjct: 180 QRQATKDAGTIAGLNVMRIINEPTAAAIAYGLDKREG-EKNILVFDLGGGTFDVSLLTID 238
Query: 181 DGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRT 360
+G+FEV +T GDTHLGGEDFD R++ HFI +K+K KD+ ++ RAV++LR E+AKR
Sbjct: 239 NGVFEVVATNGDTHLGGEDFDQRVMEHFIKLYKKKTGKDVRKDNRAVQKLRREVEKAKRA 298
Query: 361 LSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHD 540
LSS QA IEI+S YEG DF ++TRA+FEELN DLFR T+ PV+K L D+ L KS I +
Sbjct: 299 LSSQHQARIEIESFYEGEDFSETLTRAKFEELNMDLFRSTMKPVQKVLEDSDLKKSDIDE 358
Query: 541 IVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILSGDKSENVQDXXX 720
IVLVGGSTRIPKIQ+L+++FFNGKE ++ INPDE +LSGD ++ D
Sbjct: 359 IVLVGGSTRIPKIQQLVKEFFNGKEPSRGINPDEAVAYGAAVQAGVLSGD--QDTGDLVL 416
Query: 721 XXXXXXXXGIETAGGVMTVLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKDN 900
GIET GGVMT LI RN SDNQP V I+VYEGER +TKDN
Sbjct: 417 LDVCPLTLGIETVGGVMTKLIPRNTVVPTKKSQIFSTASDNQPTVTIKVYEGERPLTKDN 476
Query: 901 NLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKE 1080
+LLG F+LTGIPPAPRGVPQIEVTF+ID NGIL V+A DK TG +NKITITND+ RL+ E
Sbjct: 477 HLLGTFDLTGIPPAPRGVPQIEVTFEIDVNGILRVTAEDKGTGNKNKITITNDQNRLTPE 536
Query: 1081 DIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVED-EKLQGKINDEDKQKILD 1257
+IERMV +AEK+ ED+K ++++ ++N LESYA+++K + D EKL GK++ EDK+ +
Sbjct: 537 EIERMVNDAEKFAEEDKKLKERIDTRNELESYAYSLKNQIGDKEKLGGKLSSEDKETMEK 596
Query: 1258 KCNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLY 1374
E I WL+ +Q A+ E+F+ ++KELE++ PII+KLY
Sbjct: 597 AVEEKIEWLESHQDADIEDFKAKKKELEEIVQPIISKLY 635
>ref|XP_003124024.1| PREDICTED: stress-70 protein, mitochondrial [Sus scrofa].
Length = 679
Score = 361 bits (927), Expect = e-100
Identities = 203/463 (43%), Positives = 287/463 (61%), Gaps = 4/463 (0%)
Frame = +1
Query: 1 QRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFGVSILTIE 180
QRQATKDAG I+GLNVLR+INEPTAAA+AYGLDK ++ + ++DLGGGTF +SIL I+
Sbjct: 201 QRQATKDAGQISGLNVLRVINEPTAAALAYGLDKS--EDKIIAVYDLGGGTFDISILEIQ 258
Query: 181 DGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRT 360
G+FEVKST GDT LGGEDFD ++ + + EFKR+ D++++ A++R+R A E+AK
Sbjct: 259 KGVFEVKSTNGDTFLGGEDFDQALLRYIVKEFKRETGVDLTKDNMALQRVREAAEKAKCE 318
Query: 361 LSSSTQASIEIDSLYEGID----FYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKS 528
LSSS Q I + L +TRA+FE + DL + T+ P +KA++DA++ KS
Sbjct: 319 LSSSVQTDINLPYLTMDASGPKHLNMKLTRAQFEGIVTDLIKRTIAPCQKAMQDAEVSKS 378
Query: 529 QIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILSGDKSENVQ 708
I +++LVGG TR+PK+Q+ +QD F G+ +K++NPDE +L+GD V
Sbjct: 379 DIGEVILVGGMTRMPKVQQTVQDLF-GRAPSKAVNPDEAVAIGAAIQGGVLAGD----VT 433
Query: 709 DXXXXXXXXXXXGIETAGGVMTVLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAM 888
D GIET GGV T LI RN +D Q V I+V +GER M
Sbjct: 434 DVLLLDVTPLSLGIETLGGVFTKLINRNTTIPTKKSQVFSTAADGQTQVEIKVCQGEREM 493
Query: 889 TKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGR 1068
DN LLG+F L GIPPAPRGVPQIEVTFDIDANGI++VSA DK TG+E +I I G
Sbjct: 494 AGDNKLLGQFTLVGIPPAPRGVPQIEVTFDIDANGIVHVSAKDKGTGREQQIVI-QSSGG 552
Query: 1069 LSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQK 1248
LSK+DIE MV+ AEKY ED +++++V + N E + ++ +E+ K Q + ++ K
Sbjct: 553 LSKDDIENMVKNAEKYAEEDRRKKERVEAVNMAEGIIHDTESKMEEFKDQ--LPADECNK 610
Query: 1249 ILDKCNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQ 1377
+ ++ +++ L + + E L++ + Y+
Sbjct: 611 LKEEISKMRELLSRKDSETGENIRQAASSLQQASLKLFEMAYK 653
>ref|NP_001230322.1| heat shock 70 kDa protein 14 [Sus scrofa].
Length = 509
Score = 176 bits (447), Expect = 3e-44
Identities = 109/356 (30%), Positives = 182/356 (51%), Gaps = 6/356 (1%)
Frame = +1
Query: 1 QRQATKDAGTIAGLNVLRIINEPTAAAIAYGL--DKKVGAERNVLIFDLGGGTFGVSILT 174
Q+ A +A AG NVLR+I+EP+AA +AYG+ D G + N+L+F LGG + +S++
Sbjct: 151 QKNALGEAARAAGFNVLRLIHEPSAALLAYGIGQDSPTG-KSNILVFKLGGTSLSISVMQ 209
Query: 175 IEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAK 354
+ GI+ V ST D ++GG F + + +EF+R K D+ N RA+ +L + + AK
Sbjct: 210 VNSGIYRVLSTNTDNNIGGTHFTETLAQYLASEFQRSFKHDVRGNARAMMKLMNSADTAK 269
Query: 355 RTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQI 534
+LS+ A+ +DSLYEG DF +++RARFE L + LF ++ + L + I
Sbjct: 270 HSLSTLGSANCFLDSLYEGQDFDCNVSRARFELLCSPLFNKCIEAIRGLLEQSGFTADDI 329
Query: 535 HDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILSGDKSENVQD- 711
+ +VL GGS+RIP++Q+++++ F EL SI PDE IL G ++ V+D
Sbjct: 330 NKVVLCGGSSRIPRLQQMIKELFPAVELLNSIPPDEVIPIGAAIEAGILIGKENLLVEDS 389
Query: 712 --XXXXXXXXXXXGIETAGGVMTVLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGE-R 882
G++ +G ++ + + V +++YE + +
Sbjct: 390 LKIECSAKDILVKGVDESGANSFRVLFPSGTPLPARRQHMLQAPGSISSVCLELYESDGK 449
Query: 883 AMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITI 1050
K+ N + L + G+ I + +G L+V+ D+ TGK ITI
Sbjct: 450 NSAKEENKFAQVVLQDLDKKENGLRDILAVLTMKRDGSLHVTCTDQETGKCEAITI 505
>ref|XP_003361557.1| PREDICTED: heat shock 70 kDa protein 14-like [Sus scrofa].
Length = 530
Score = 171 bits (434), Expect = 9e-43
Identities = 108/356 (30%), Positives = 179/356 (50%), Gaps = 6/356 (1%)
Frame = +1
Query: 1 QRQATKDAGTIAGLNVLRIINEPTAAAIAYGL--DKKVGAERNVLIFDLGGGTFGVSILT 174
Q+ A +A AG NVLR+I+EP+AA +AYG+ D G + N+L+F LGG + +S++
Sbjct: 172 QKNALGEAARAAGFNVLRLIHEPSAALLAYGIGQDSPTG-KSNILVFKLGGTSLSISVMQ 230
Query: 175 IEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAK 354
+ GI+ V ST D ++GG F + + +EF+R K D+ N RA+ +L + + AK
Sbjct: 231 VNSGIYRVLSTNTDNNIGGTHFTETLAQYLASEFQRSFKHDVRGNARAMMKLMNSADTAK 290
Query: 355 RTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQI 534
+LS+ A+ +DSLYEG DF +++RARFE L + L + L + I
Sbjct: 291 HSLSTLGSANCFLDSLYEGQDFDCNVSRARFELLCSPLXXXXXXAIRGLLEQSGFTADDI 350
Query: 535 HDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILSGDKSENVQD- 711
+ +VL GGS+RIP++Q+++++ F EL SI PDE IL G ++ V+D
Sbjct: 351 NKVVLCGGSSRIPRLQQMIKELFPAVELLNSIPPDEVIPIGAAIEAGILIGKENLLVEDS 410
Query: 712 --XXXXXXXXXXXGIETAGGVMTVLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGE-R 882
G++ +G ++ + + V +++YE + +
Sbjct: 411 LKIECSAKDILVKGVDESGANSFRVLFPSGTPLPARRQHMLQAPGSISSVYLELYESDGK 470
Query: 883 AMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITI 1050
K+ N + L + G+ I + +G L+V+ D+ TGK ITI
Sbjct: 471 NSAKEENKFAQVVLQDLDKKENGLRDILAVLTMKRDGSLHVTCTDQETGKCEAITI 526
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 37,393,780
Number of extensions: 1041465
Number of successful extensions: 3488
Number of sequences better than 1.0e-05: 15
Number of HSP's gapped: 3437
Number of HSP's successfully gapped: 16
Length of query: 589
Length of database: 11,343,932
Length adjustment: 104
Effective length of query: 485
Effective length of database: 8,754,644
Effective search space: 4246002340
Effective search space used: 4246002340
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-001103
(1767 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr09 1098 0.0
Sscrofa_Chr03 361 9e-97
Sscrofa_Chr14 357 1e-95
gb|GL895435.1| Sus scrofa unplaced genomic scaffold chrU_scaffol... 244 1e-61
Sscrofa_Chr01 238 9e-60
Sscrofa_Chr17 198 7e-48
Sscrofa_Chr07 186 3e-44
gb|GL896522.1| Sus scrofa unplaced genomic scaffold chrU_scaffol... 137 2e-29
gb|GL893623.1| Sus scrofa unplaced genomic scaffold chrU_scaffol... 101 1e-18
Sscrofa_Chr15 94 3e-16
>Sscrofa_Chr09
|| Length = 153670197
Score = 1098 bits (554), Expect = 0.0
Identities = 557/558 (99%)
Strand = Plus / Plus
Query: 104 aggttggagctgaaagaaacgtgctgatcttcgacttgggtggtggcacttttggtgtgt 163
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 55305502 aggttggagctgaaagaaacgtgctgatcttcgacttgggtggtggcacttttgatgtgt 55305561
Query: 164 caatcctcactattgaggatggtatcttcgaggtcaaatctacagctggagatacccact 223
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55305562 caatcctcactattgaggatggtatcttcgaggtcaaatctacagctggagatacccact 55305621
Query: 224 tgggtggagaggactttgacaatagaatggtcaaccattttattgcagagttcaagcgca 283
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55305622 tgggtggagaggactttgacaatagaatggtcaaccattttattgcagagttcaagcgca 55305681
Query: 284 agcacaagaaggacatcagcgagaacaagagggctgtccgtcgcctccgtactgcttgtg 343
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55305682 agcacaagaaggacatcagcgagaacaagagggctgtccgtcgcctccgtactgcttgtg 55305741
Query: 344 agcgtgctaagcgcactctctcttccagcactcaggccagtattgagattgattccctct 403
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55305742 agcgtgctaagcgcactctctcttccagcactcaggccagtattgagattgattccctct 55305801
Query: 404 atgaaggaatcgacttctatacctctattactcgtgcccgatttgaagaattgaatgctg 463
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55305802 atgaaggaatcgacttctatacctctattactcgtgcccgatttgaagaattgaatgctg 55305861
Query: 464 acctgttccgtggcaccctggatcctgtggagaaagcccttcgggatgccaagctagaca 523
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55305862 acctgttccgtggcaccctggatcctgtggagaaagcccttcgggatgccaagctagaca 55305921
Query: 524 agtctcagatccatgacattgtcctggtgggtggctcaacccgtatccccaagatccaga 583
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55305922 agtctcagatccatgacattgtcctggtgggtggctcaacccgtatccccaagatccaga 55305981
Query: 584 agcttctgcaggacttcttcaacgggaaagaactgaataagagcatcaaccccgatgagg 643
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55305982 agcttctgcaggacttcttcaacgggaaagaactgaataagagcatcaaccccgatgagg 55306041
Query: 644 ctgttgcttatggtgcag 661
||||||||||||||||||
Sbjct: 55306042 ctgttgcttatggtgcag 55306059
Score = 1098 bits (554), Expect = 0.0
Identities = 557/558 (99%)
Strand = Plus / Plus
Query: 104 aggttggagctgaaagaaacgtgctgatcttcgacttgggtggtggcacttttggtgtgt 163
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 55407316 aggttggagctgaaagaaacgtgctgatcttcgacttgggtggtggcacttttgatgtgt 55407375
Query: 164 caatcctcactattgaggatggtatcttcgaggtcaaatctacagctggagatacccact 223
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55407376 caatcctcactattgaggatggtatcttcgaggtcaaatctacagctggagatacccact 55407435
Query: 224 tgggtggagaggactttgacaatagaatggtcaaccattttattgcagagttcaagcgca 283
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55407436 tgggtggagaggactttgacaatagaatggtcaaccattttattgcagagttcaagcgca 55407495
Query: 284 agcacaagaaggacatcagcgagaacaagagggctgtccgtcgcctccgtactgcttgtg 343
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55407496 agcacaagaaggacatcagcgagaacaagagggctgtccgtcgcctccgtactgcttgtg 55407555
Query: 344 agcgtgctaagcgcactctctcttccagcactcaggccagtattgagattgattccctct 403
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55407556 agcgtgctaagcgcactctctcttccagcactcaggccagtattgagattgattccctct 55407615
Query: 404 atgaaggaatcgacttctatacctctattactcgtgcccgatttgaagaattgaatgctg 463
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55407616 atgaaggaatcgacttctatacctctattactcgtgcccgatttgaagaattgaatgctg 55407675
Query: 464 acctgttccgtggcaccctggatcctgtggagaaagcccttcgggatgccaagctagaca 523
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55407676 acctgttccgtggcaccctggatcctgtggagaaagcccttcgggatgccaagctagaca 55407735
Query: 524 agtctcagatccatgacattgtcctggtgggtggctcaacccgtatccccaagatccaga 583
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55407736 agtctcagatccatgacattgtcctggtgggtggctcaacccgtatccccaagatccaga 55407795
Query: 584 agcttctgcaggacttcttcaacgggaaagaactgaataagagcatcaaccccgatgagg 643
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55407796 agcttctgcaggacttcttcaacgggaaagaactgaataagagcatcaaccccgatgagg 55407855
Query: 644 ctgttgcttatggtgcag 661
||||||||||||||||||
Sbjct: 55407856 ctgttgcttatggtgcag 55407873
Score = 823 bits (415), Expect = 0.0
Identities = 415/415 (100%)
Strand = Plus / Plus
Query: 1294 cagactgcggagaaggaagaatttgaacatcagcagaaggagctggagaaagtctgcaac 1353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55307605 cagactgcggagaaggaagaatttgaacatcagcagaaggagctggagaaagtctgcaac 55307664
Query: 1354 cccatcattaccaagctctaccagagtgcaggaggcatgccaggaggaatgcctgggggc 1413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55307665 cccatcattaccaagctctaccagagtgcaggaggcatgccaggaggaatgcctgggggc 55307724
Query: 1414 ttccctgggggcggagctcctccatctggtggtgcttcttctgggcccaccattgaggag 1473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55307725 ttccctgggggcggagctcctccatctggtggtgcttcttctgggcccaccattgaggag 55307784
Query: 1474 gttgactaagccaaactggtatagatttagcattgttccacatgacattgaaggacccaa 1533
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55307785 gttgactaagccaaactggtatagatttagcattgttccacatgacattgaaggacccaa 55307844
Query: 1534 atttgtagcaaattccatggcagttgtaaagttgagctgctatagtaaataactgggcat 1593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55307845 atttgtagcaaattccatggcagttgtaaagttgagctgctatagtaaataactgggcat 55307904
Query: 1594 tcttgatacttgaatatggaatatgcacagggaaaggaaattacattgcactttataagc 1653
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55307905 tcttgatacttgaatatggaatatgcacagggaaaggaaattacattgcactttataagc 55307964
Query: 1654 actgtattgttaagtggaaaatgcaatgtcttaaataaaactatttaaaattggc 1708
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55307965 actgtattgttaagtggaaaatgcaatgtcttaaataaaactatttaaaattggc 55308019
Score = 823 bits (415), Expect = 0.0
Identities = 415/415 (100%)
Strand = Plus / Plus
Query: 1294 cagactgcggagaaggaagaatttgaacatcagcagaaggagctggagaaagtctgcaac 1353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55409419 cagactgcggagaaggaagaatttgaacatcagcagaaggagctggagaaagtctgcaac 55409478
Query: 1354 cccatcattaccaagctctaccagagtgcaggaggcatgccaggaggaatgcctgggggc 1413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55409479 cccatcattaccaagctctaccagagtgcaggaggcatgccaggaggaatgcctgggggc 55409538
Query: 1414 ttccctgggggcggagctcctccatctggtggtgcttcttctgggcccaccattgaggag 1473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55409539 ttccctgggggcggagctcctccatctggtggtgcttcttctgggcccaccattgaggag 55409598
Query: 1474 gttgactaagccaaactggtatagatttagcattgttccacatgacattgaaggacccaa 1533
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55409599 gttgactaagccaaactggtatagatttagcattgttccacatgacattgaaggacccaa 55409658
Query: 1534 atttgtagcaaattccatggcagttgtaaagttgagctgctatagtaaataactgggcat 1593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55409659 atttgtagcaaattccatggcagttgtaaagttgagctgctatagtaaataactgggcat 55409718
Query: 1594 tcttgatacttgaatatggaatatgcacagggaaaggaaattacattgcactttataagc 1653
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55409719 tcttgatacttgaatatggaatatgcacagggaaaggaaattacattgcactttataagc 55409778
Query: 1654 actgtattgttaagtggaaaatgcaatgtcttaaataaaactatttaaaattggc 1708
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55409779 actgtattgttaagtggaaaatgcaatgtcttaaataaaactatttaaaattggc 55409833
Score = 466 bits (235), Expect = e-128
Identities = 235/235 (100%)
Strand = Plus / Plus
Query: 1062 aggtcgtttgagcaaggaagacattgagcgcatggtccaggaagctgagaagtacaaagc 1121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55307089 aggtcgtttgagcaaggaagacattgagcgcatggtccaggaagctgagaagtacaaagc 55307148
Query: 1122 tgaagatgagaagcagagggataaggtgtcttctaagaattcacttgagtcttatgcttt 1181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55307149 tgaagatgagaagcagagggataaggtgtcttctaagaattcacttgagtcttatgcttt 55307208
Query: 1182 caacatgaaagctactgttgaagatgaaaaacttcaaggcaagatcaatgatgaggacaa 1241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55307209 caacatgaaagctactgttgaagatgaaaaacttcaaggcaagatcaatgatgaggacaa 55307268
Query: 1242 acagaagattcttgataagtgtaatgaaataatcaactggctggataagaaccag 1296
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55307269 acagaagattcttgataagtgtaatgaaataatcaactggctggataagaaccag 55307323
Score = 466 bits (235), Expect = e-128
Identities = 235/235 (100%)
Strand = Plus / Plus
Query: 1062 aggtcgtttgagcaaggaagacattgagcgcatggtccaggaagctgagaagtacaaagc 1121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55408903 aggtcgtttgagcaaggaagacattgagcgcatggtccaggaagctgagaagtacaaagc 55408962
Query: 1122 tgaagatgagaagcagagggataaggtgtcttctaagaattcacttgagtcttatgcttt 1181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55408963 tgaagatgagaagcagagggataaggtgtcttctaagaattcacttgagtcttatgcttt 55409022
Query: 1182 caacatgaaagctactgttgaagatgaaaaacttcaaggcaagatcaatgatgaggacaa 1241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55409023 caacatgaaagctactgttgaagatgaaaaacttcaaggcaagatcaatgatgaggacaa 55409082
Query: 1242 acagaagattcttgataagtgtaatgaaataatcaactggctggataagaaccag 1296
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55409083 acagaagattcttgataagtgtaatgaaataatcaactggctggataagaaccag 55409137
Score = 410 bits (207), Expect = e-111
Identities = 207/207 (100%)
Strand = Plus / Plus
Query: 660 agctgtgcaggcagccattttatctggagacaaatctgaaaatgttcaagatttgctgct 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55306254 agctgtgcaggcagccattttatctggagacaaatctgaaaatgttcaagatttgctgct 55306313
Query: 720 actggatgtcactcctctttcccttggcattgaaactgctggtggagtcatgactgtcct 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55306314 actggatgtcactcctctttcccttggcattgaaactgctggtggagtcatgactgtcct 55306373
Query: 780 catcaagcgcaatactaccattcctactaagcagacgcagacgttcaccacctactctga 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55306374 catcaagcgcaatactaccattcctactaagcagacgcagacgttcaccacctactctga 55306433
Query: 840 caaccagcctggtgtgctcattcaggt 866
|||||||||||||||||||||||||||
Sbjct: 55306434 caaccagcctggtgtgctcattcaggt 55306460
Score = 410 bits (207), Expect = e-111
Identities = 207/207 (100%)
Strand = Plus / Plus
Query: 660 agctgtgcaggcagccattttatctggagacaaatctgaaaatgttcaagatttgctgct 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55408068 agctgtgcaggcagccattttatctggagacaaatctgaaaatgttcaagatttgctgct 55408127
Query: 720 actggatgtcactcctctttcccttggcattgaaactgctggtggagtcatgactgtcct 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55408128 actggatgtcactcctctttcccttggcattgaaactgctggtggagtcatgactgtcct 55408187
Query: 780 catcaagcgcaatactaccattcctactaagcagacgcagacgttcaccacctactctga 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55408188 catcaagcgcaatactaccattcctactaagcagacgcagacgttcaccacctactctga 55408247
Query: 840 caaccagcctggtgtgctcattcaggt 866
|||||||||||||||||||||||||||
Sbjct: 55408248 caaccagcctggtgtgctcattcaggt 55408274
Score = 402 bits (203), Expect = e-109
Identities = 203/203 (100%)
Strand = Plus / Plus
Query: 863 aggtttatgaaggtgagcgtgccatgaccaaggataacaacctgcttggcaagtttgaac 922
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55306686 aggtttatgaaggtgagcgtgccatgaccaaggataacaacctgcttggcaagtttgaac 55306745
Query: 923 tcacaggcatacctccggccccacgaggcgttcctcagattgaagttacttttgatattg 982
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55306746 tcacaggcatacctccggccccacgaggcgttcctcagattgaagttacttttgatattg 55306805
Query: 983 atgccaatggcatcctcaatgtctctgctgtggataagagcacaggaaaggagaacaaga 1042
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55306806 atgccaatggcatcctcaatgtctctgctgtggataagagcacaggaaaggagaacaaga 55306865
Query: 1043 ttaccatcactaatgacaaaggt 1065
|||||||||||||||||||||||
Sbjct: 55306866 ttaccatcactaatgacaaaggt 55306888
Score = 402 bits (203), Expect = e-109
Identities = 203/203 (100%)
Strand = Plus / Plus
Query: 863 aggtttatgaaggtgagcgtgccatgaccaaggataacaacctgcttggcaagtttgaac 922
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55408500 aggtttatgaaggtgagcgtgccatgaccaaggataacaacctgcttggcaagtttgaac 55408559
Query: 923 tcacaggcatacctccggccccacgaggcgttcctcagattgaagttacttttgatattg 982
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55408560 tcacaggcatacctccggccccacgaggcgttcctcagattgaagttacttttgatattg 55408619
Query: 983 atgccaatggcatcctcaatgtctctgctgtggataagagcacaggaaaggagaacaaga 1042
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55408620 atgccaatggcatcctcaatgtctctgctgtggataagagcacaggaaaggagaacaaga 55408679
Query: 1043 ttaccatcactaatgacaaaggt 1065
|||||||||||||||||||||||
Sbjct: 55408680 ttaccatcactaatgacaaaggt 55408702
>Sscrofa_Chr03
|| Length = 144787322
Score = 361 bits (182), Expect = 9e-97
Identities = 432/509 (84%), Gaps = 11/509 (2%)
Strand = Plus / Minus
Query: 1075 aaggaagacattgagcgcatggtccaggaagctgagaagtacaaagctgaagatgagaag 1134
|||||||||||||||| ||||||||||||||||| |||||| ||||| ||||| |||
Sbjct: 104046213 aaggaagacattgagcatatggtccaggaagctgaaaagtacgaagctaaagat---aag 104046157
Query: 1135 cagagggataaggtgtcttctaagaattcacttgagtcttatgct-ttcaacatgaaagc 1193
|| |||| ||||||||||| ||||||| |||||| || | | | ||||||||||||||
Sbjct: 104046156 caatgggacaaggtgtcttccaagaatttacttgaatcctgtacaattcaacatgaaagc 104046097
Query: 1194 tactgttgaagatgaaaaacttcaaggcaagatcaatgatgaggacaaacagaagattct 1253
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 104046096 aactgttgcagatgaaaaacttcaaggcaagatcaatgatgaggacaaacagaagattct 104046037
Query: 1254 tgataagtgtaatgaaataatcaactggctggataagaaccagactgcggagaaggaaga 1313
||| || || |||||||| |||||| |||| |||||||||||||| || |||||||||||
Sbjct: 104046036 tgagaaatgcaatgaaatcatcaaccggcttgataagaaccagacggcagagaaggaaga 104045977
Query: 1314 atttgaacatcagcagaaggagctggagaaagtctgcaaccccatcattaccaagctcta 1373
|||||||||||||||||| |||||||| |||| |||||||||||||||||| ||||| ||
Sbjct: 104045976 atttgaacatcagcagaaagagctggaaaaagcctgcaaccccatcattactaagctgta 104045917
Query: 1374 ccagagtgcaggaggcatgccaggaggaatgcctgggggcttccctgggggcggagctcc 1433
|||||||| |||||||||||||| ||||||| ||| ||||||| || |||||| |
Sbjct: 104045916 -tggagtgcagaaggcatgccaggag---tgcctggtggcgtccctggtggtggagctgc 104045861
Query: 1434 tccatctggtggtgcttcttctgggcccaccattgaggaggttgactaagccaaactg-g 1492
||||||||||||| | ||||| |||||| || |||||||| || | ||| ||| |
Sbjct: 104045860 tccatctggtggtaccgtccctgggtccaccacagaagaggttgattatggcaacctgag 104045801
Query: 1493 tatagatttagcattgttc--cacatgacattgaaggacccaaatttgtagcaaattcca 1550
|||||||| | |||||||| |||| |||| ||||||| ||||| ||||||||||||
Sbjct: 104045800 tatagattgaacattgttccacacagaacatcaaaggacctaaattcatagcaaattcca 104045741
Query: 1551 tggcagttgtaaagttgagctgctatagt 1579
| | || | ||||| ||||||||||||||
Sbjct: 104045740 tagtagctttaaagctgagctgctatagt 104045712
>Sscrofa_Chr14
|| Length = 153851969
Score = 357 bits (180), Expect = 1e-95
Identities = 237/256 (92%)
Strand = Plus / Minus
Query: 1453 tctgggcccaccattgaggaggttgactaagccaaactggtatagatttagcattgttcc 1512
|||||||||||||||||||||||||| ||| || |||| |||||||| |||| ||||
Sbjct: 50096321 tctgggcccaccattgaggaggttgattaaatcatcctggcatagatttggcatcattcc 50096262
Query: 1513 acatgacattgaaggacccaaatttgtagcaaattccatggcagttgtaaagttgagctg 1572
|||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||
Sbjct: 50096261 acatgacattgaaggatccaaatttgttgcaaattccatggtagttgtaaagttgagctg 50096202
Query: 1573 ctatagtaaataactgggcattcttgatacttgaatatggaatatgcacagggaaaggaa 1632
|||||||||||||||| ||||||||||||| ||||||||||||||||| | |||||||||
Sbjct: 50096201 ctatagtaaataactgagcattcttgatacctgaatatggaatatgcataaggaaaggaa 50096142
Query: 1633 attacattgcactttataagcactgtattgttaagtggaaaatgcaatgtcttaaataaa 1692
|| |||||||||||||| |||||||||||||||||||||||||||| |||||||||||||
Sbjct: 50096141 ataacattgcactttattagcactgtattgttaagtggaaaatgcagtgtcttaaataaa 50096082
Query: 1693 actatttaaaattggc 1708
||||||||||||||||
Sbjct: 50096081 actatttaaaattggc 50096066
Score = 81.8 bits (41), Expect = 1e-12
Identities = 41/41 (100%)
Strand = Plus / Minus
Query: 1381 gcaggaggcatgccaggaggaatgcctgggggcttccctgg 1421
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 50096372 gcaggaggcatgccaggaggaatgcctgggggcttccctgg 50096332
>gb|GL895435.1| Sus scrofa unplaced genomic scaffold chrU_scaffold400
Length = 1092
Score = 244 bits (123), Expect = 1e-61
Identities = 282/335 (84%)
Strand = Plus / Plus
Query: 340 tgtgagcgtgctaagcgcactctctcttccagcactcaggccagtattgagattgattcc 399
|||||||| || || ||||| || ||||||||||| ||||||| | || || || |||
Sbjct: 690 tgtgagcgcgccaaacgcaccctgtcttccagcacccaggccacgctggaaatcgactcc 749
Query: 400 ctctatgaaggaatcgacttctatacctctattactcgtgcccgatttgaagaattgaat 459
|||| ||| || | |||||||| || ||||| ||||| ||||| ||||||||| ||
Sbjct: 750 ctctttgagggtgtagacttctacacttctatcactcgagcccgctttgaagaactgtgc 809
Query: 460 gctgacctgttccgtggcaccctggatcctgtggagaaagcccttcgggatgccaagcta 519
| ||||| ||||| |||||||||| || |||||||||||||| ||||||||||||||
Sbjct: 810 tcagacctcttccgcagcaccctggagccagtggagaaagccctgcgggatgccaagctg 869
Query: 520 gacaagtctcagatccatgacattgtcctggtgggtggctcaacccgtatccccaagatc 579
|||||| ||||||||||||| |||||||| ||||||||||| ||||| |||||||||||
Sbjct: 870 gacaaggctcagatccatgatattgtcctagtgggtggctctacccgcatccccaagata 929
Query: 580 cagaagcttctgcaggacttcttcaacgggaaagaactgaataagagcatcaaccccgat 639
|||||||||||||||||||||||||| || |||||||| |||||||| ||||| |||
Sbjct: 930 cagaagcttctgcaggacttcttcaatggccgggaactgaacaagagcataaacccagat 989
Query: 640 gaggctgttgcttatggtgcagctgtgcaggcagc 674
|||||||| || |||||||| ||||||||||||||
Sbjct: 990 gaggctgtggcctatggtgctgctgtgcaggcagc 1024
>Sscrofa_Chr01
|| Length = 315321322
Score = 238 bits (120), Expect = 9e-60
Identities = 352/423 (83%), Gaps = 6/423 (1%)
Strand = Plus / Minus
Query: 1156 aagaattcacttgagtcttatgctttcaacatgaaagctactgttgaagatgaaaaactt 1215
|||||||||||||| ||||||| || ||||||||||| | |||||||| ||||||||
Sbjct: 251371059 aagaattcacttgaatcttatgtatttaacatgaaagcagccattgaagat-aaaaactt 251371001
Query: 1216 caaggcaagatcaatgatgaggacaaacagaagattcttgataagtgtaatgaaataatc 1275
||||| ||||||| || ||||||| ||||||||||||| ||||||| |||||| |||
Sbjct: 251371000 taaggcgagatcaacaatacggacaaatagaagattcttgacaagtgtagtgaaatcatc 251370941
Query: 1276 aactggctggataagaaccagactgcggagaaggaagaatttgaacatcagcagaaggag 1335
||||||| |||| |||||||||||| ||||||||||||| |||||| |||||| ||
Sbjct: 251370940 tactggctcgataggaaccagactgcagagaaggaagaatacgaacatttgcagaaagat 251370881
Query: 1336 ctggagaaagtctgcaaccccatcattaccaagctctaccagagtgcaggaggcatgcca 1395
||||| |||||||| | ||||| ||||| |||| || |||||||||||||||||||
Sbjct: 251370880 ctggaaaaagtctgtacacccataattactaagccagactggagtgcaggaggcatgcca 251370821
Query: 1396 ggaggaatgcctgggggcttccctgggggcggagctcctccatctggtg-gtgcttcttc 1454
||| |||||||||||| ||||||||| || || ||| |||||| ||||| | |||| ||
Sbjct: 251370820 ggaagaatgcctggggacttccctggtggtggtgcttctccatttggtgaggtcttc-tc 251370762
Query: 1455 tgggcccaccattgaggaggttgactaagccaaactg-gtatagatttagcattgttc-- 1511
| |||||||||||| ||||| || ||| |||| || | ||||||||||||| ||||
Sbjct: 251370761 taggcccaccattgcagaggtcgaataaaccaacttgagcatagatttagcatggttcca 251370702
Query: 1512 cacatgacattgaaggacccaaatttgtagcaaattccatggcagttgtaaagttgagct 1571
|||| ||||||||||||||| ||||||||||||| ||||||| ||| ||||||||| ||
Sbjct: 251370701 cacaaaacattgaaggacccacatttgtagcaaatcccatggctgttttaaagttgaact 251370642
Query: 1572 gct 1574
|||
Sbjct: 251370641 gct 251370639
Score = 143 bits (72), Expect = 4e-31
Identities = 137/157 (87%), Gaps = 10/157 (6%)
Strand = Plus / Minus
Query: 1561 aaagttgagctgctatagtaaataactgggcattcttgatacttgaatatgg--aatatg 1618
||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| ||
Sbjct: 251370388 aaagttgagctgccatagtaaataactgggcattcttgatacttgaatatggaaaatgtg 251370329
Query: 1619 cacagggaaaggaaa------ttacattgcactttataagcactgtattgttaagtggaa 1672
||||| ||||||||| ||||||| |||||| ||||||||||| |||||||||
Sbjct: 251370328 cacagagaaaggaaagaaattgtacattgtgctttatgagcactgtatttgtaagtggaa 251370269
Query: 1673 aatgcaatgtcttaaataaaac--tatttaaaattgg 1707
||||||||||||| |||||||| |||||||||||||
Sbjct: 251370268 aatgcaatgtcttcaataaaactatatttaaaattgg 251370232
>Sscrofa_Chr17
|| Length = 69701581
Score = 198 bits (100), Expect = 7e-48
Identities = 225/262 (85%), Gaps = 6/262 (2%)
Strand = Plus / Plus
Query: 1406 ctgggggcttccctgggggcggagctcctccatctggtggtgcttcttctgggcccacca 1465
|||||| ||||||||| ||| ||||| ||||| |||||||||| || ||||||||||||
Sbjct: 42199309 ctggggacttccctggtggcagagcttctccacctggtggtgcctcctctgggcccaccc 42199368
Query: 1466 ttgaggaggttgactaagccaaactggtatagatttagcattgtt--ccacatgacattg 1523
|||||||||||| |||||||| || | | ||||||||||| ||| ||||| ||| ||
Sbjct: 42199369 ttgaggaggttggttaagccaacctagcacagatttagcatcgttccccacaaaacactg 42199428
Query: 1524 aaggacccaaatttgtagcaaattccatggcagttgtaaagttgagctgctatagtaaat 1583
|||| |||| ||||| ||||| |||| | |||| |||||||||| ||||||||| |||
Sbjct: 42199429 aagggcccagatttgcagcaagttccct-taagttttaaagttgaggtgctatagt-aat 42199486
Query: 1584 aactgggcattcttgatacttgaatatggaatatg--cacagggaaaggaaattacattg 1641
|||| ||||||| |||||||||||||||||||||| |||||||||||||||| ||||||
Sbjct: 42199487 aactaggcattcctgatacttgaatatggaatatgtacacagggaaaggaaataacattg 42199546
Query: 1642 cactttataagcactgtattgt 1663
||||||||| ||||||||||||
Sbjct: 42199547 cactttataggcactgtattgt 42199568
>Sscrofa_Chr07
|| Length = 134764511
Score = 186 bits (94), Expect = 3e-44
Identities = 528/670 (78%), Gaps = 2/670 (0%)
Strand = Plus / Plus
Query: 463 gacctgttccgtggcaccctggatcctgtggagaaagcccttcgggatgccaagctagac 522
|||||||| || || ||||| || || |||||||| || || || || |||||||| |||
Sbjct: 94988663 gacctgtttcgcgggaccctcgagccggtggagaaggcgctgcgcgacgccaagctggac 94988722
Query: 523 aagtctcagatccatgacattgtcctggtgggtggctcaacccgtatccccaagatccag 582
||| |||||||| || || || |||||||| ||||| || || |||||||||||||||
Sbjct: 94988723 aagggccagatccaggagatcgtgctggtgggcggctccactcgcatccccaagatccag 94988782
Query: 583 aagcttctgcaggacttcttcaacgggaaagaactgaataagagcatcaaccccgatgag 642
||||| |||||||| ||||||||||| || || ||||| |||||||||||||| || |||
Sbjct: 94988783 aagctgctgcaggatttcttcaacggcaaggagctgaacaagagcatcaaccctgacgag 94988842
Query: 643 gctgttgcttatggtgcagctgtgcaggcagccat-tttatctggagacaaatctgaaaa 701
|| || || || || || |||||||||||||| || | ||| || ||||| || || ||
Sbjct: 94988843 gcggtggcctacggagccgctgtgcaggcagcgatcctgatc-ggggacaagtccgagaa 94988901
Query: 702 tgttcaagatttgctgctactggatgtcactcctctttcccttggcattgaaactgctgg 761
|| || || |||||||||| || || || || || || || ||||| || || |||||
Sbjct: 94988902 cgtgcaggacctgctgctactcgacgtgaccccgctctcgctgggcatcgagacggctgg 94988961
Query: 762 tggagtcatgactgtcctcatcaagcgcaatactaccattcctactaagcagacgcagac 821
|| ||||||||| |||||||| | || || || || || || ||||||||||||||
Sbjct: 94988962 cggcgtcatgactccactcatcaaaaggaacaccacgatccccacgaagcagacgcagac 94989021
Query: 822 gttcaccacctactctgacaaccagcctggtgtgctcattcaggtttatgaaggtgagcg 881
|||||||||||||| ||||||||| | ||||| | ||||| || || || || ||
Sbjct: 94989022 cttcaccacctactcagacaaccagagcagcgtgctggtgcaggtgtacgagggcgaacg 94989081
Query: 882 tgccatgaccaaggataacaacctgcttggcaagtttgaactcacaggcatacctccggc 941
|||||||| ||||| || |||||||| |||||||| || || || || || || |||||
Sbjct: 94989082 ggccatgacaaaggacaataacctgctgggcaagttcgacctgaccgggattcccccggc 94989141
Query: 942 cccacgaggcgttcctcagattgaagttacttttgatattgatgccaatggcatcctcaa 1001
|| || || || || |||||||| || || || || || ||||||||||||||||||||
Sbjct: 94989142 gccccgcggggtcccccagattgaggtcaccttcgacatcgatgccaatggcatcctcaa 94989201
Query: 1002 tgtctctgctgtggataagagcacaggaaaggagaacaagattaccatcactaatgacaa 1061
||| | || | || |||||||| || || || ||||| || |||||||| || |||||
Sbjct: 94989202 cgtcaccgccgccgacaagagcaccggtaaagaaaacaaaatcaccatcaccaacgacaa 94989261
Query: 1062 aggtcgtttgagcaaggaagacattgagcgcatggtccaggaagctgagaagtacaaagc 1121
||||||| | |||||||| |||||||| || ||||| ||||| |||||| |||||| |
Sbjct: 94989262 aggtcgtctaagcaaggacgacattgaccggatggtgcaggaggctgagcggtacaagtc 94989321
Query: 1122 tgaagatgag 1131
|||||||||
Sbjct: 94989322 ggaagatgag 94989331
>gb|GL896522.1| Sus scrofa unplaced genomic scaffold chrU_scaffold854
Length = 16607
Score = 137 bits (69), Expect = 2e-29
Identities = 771/1005 (76%)
Strand = Plus / Plus
Query: 127 ctgatcttcgacttgggtggtggcacttttggtgtgtcaatcctcactattgaggatggt 186
|||||||| || ||||||| ||||| |||| |||||| ||||| || || || |||||
Sbjct: 13427 ctgatctttgatctgggtggaggcacatttgatgtgtccatcctgaccatagatgatggg 13486
Query: 187 atcttcgaggtcaaatctacagctggagatacccacttgggtggagaggactttgacaat 246
|| || |||||||| | |||||||| || ||||||||||| || |||||||| |||||
Sbjct: 13487 atttttgaggtcaaggccacagctggggacacccacttgggcggcgaggacttcgacaac 13546
Query: 247 agaatggtcaaccattttattgcagagttcaagcgcaagcacaagaaggacatcagcgag 306
|| |||| | ||| || | | ||||||||| | ||||||||||||||||||||| ||
Sbjct: 13547 aggctggtgagccacttcgtggaggagttcaagaggaagcacaagaaggacatcagccag 13606
Query: 307 aacaagagggctgtccgtcgcctccgtactgcttgtgagcgtgctaagcgcactctctct 366
|||||| |||| || | || || || || || || ||||| || ||| | || || ||
Sbjct: 13607 aacaagcgggcggtgaggcggctgcgcacggcctgcgagcgggccaagaggaccctgtcg 13666
Query: 367 tccagcactcaggccagtattgagattgattccctctatgaaggaatcgacttctatacc 426
|||||||| ||||||| | || |||||||| || || ||||| ||||| ||||| ||
Sbjct: 13667 tccagcacgcaggccaacttggaaattgattcgctttacgaaggcatcgatttctacaca 13726
Query: 427 tctattactcgtgcccgatttgaagaattgaatgctgacctgttccgtggcaccctggat 486
|| || || | ||||| |||||||| || || |||||||| | |||||||||||
Sbjct: 13727 tccatcaccagagcccggtttgaagagctgtgcgcagacctgtttaggggcaccctggag 13786
Query: 487 cctgtggagaaagcccttcgggatgccaagctagacaagtctcagatccatgacattgtc 546
|| |||||||| || ||||||||||||||| | || ||| || | ||||| |||||||||
Sbjct: 13787 ccggtggagaaggctcttcgggatgccaagatggataaggctaaaatccacgacattgtc 13846
Query: 547 ctggtgggtggctcaacccgtatccccaagatccagaagcttctgcaggacttcttcaac 606
| || || ||||| ||||| ||||| ||| | |||| | | ||||||||| ||| ||
Sbjct: 13847 ttagtagggggctccacccgcatccctaaggtgcagaggttattgcaggactactttaat 13906
Query: 607 gggaaagaactgaataagagcatcaaccccgatgaggctgttgcttatggtgcagctgtg 666
|| || || || ||||| ||||||||||||||||| || || || || || || ||
Sbjct: 13907 ggccgtgatctcaacaagagtatcaaccccgatgaggcggtggcctacggggctgcagta 13966
Query: 667 caggcagccattttatctggagacaaatctgaaaatgttcaagatttgctgctactggat 726
||||||||||| | || || || |||||||| || || || |||| | |||||
Sbjct: 13967 caggcagccatcctgatgggggataagtctgaaaaggtacaggacctgcttttgttggat 14026
Query: 727 gtcactcctctttcccttggcattgaaactgctggtggagtcatgactgtcctcatcaag 786
|| |||| || || || || | || || || || || || ||||||||||| ||||||
Sbjct: 14027 gtggctccgctgtcgctggggctggagacggccggcggcgtgatgactgtcctgatcaag 14086
Query: 787 cgcaatactaccattcctactaagcagacgcagacgttcaccacctactctgacaaccag 846
||||| | ||||| || || |||||||| |||| |||||||| ||||| |||||||||
Sbjct: 14087 cgcaactccaccatccccaccaagcagacacagatcttcaccacgtactcggacaaccag 14146
Query: 847 cctggtgtgctcattcaggtttatgaaggtgagcgtgccatgaccaaggataacaacctg 906
|| || ||||| || ||||| || || || ||| | |||||||| ||| |||||||||
Sbjct: 14147 ccgggcgtgctgatccaggtgtacgagggcgagagggccatgacacgggacaacaacctg 14206
Query: 907 cttggcaagtttgaactcacaggcatacctccggccccacgaggcgttcctcagattgaa 966
|| || ||||| || || || || ||||| || || | || ||||||||||| ||
Sbjct: 14207 ctggggcgctttgacctgactggaatccctcctgcacccaggggagttcctcagatcgag 14266
Query: 967 gttacttttgatattgatgccaatggcatcctcaatgtctctgctgtggataagagcaca 1026
|| || || || || |||||||| |||||||| || ||| | || ||| |||||||||
Sbjct: 14267 gtgaccttcgacatcgatgccaacggcatcctgaacgtcacggccacggacaagagcaca 14326
Query: 1027 ggaaaggagaacaagattaccatcactaatgacaaaggtcgtttgagcaaggaagacatt 1086
|| |||| |||||||| |||||||| |||||||| || || |||||||||| || ||
Sbjct: 14327 ggcaaggccaacaagatcaccatcaccaatgacaagggccggctgagcaaggaggagatc 14386
Query: 1087 gagcgcatggtccaggaagctgagaagtacaaagctgaagatgag 1131
||||||||||| | ||| ||||||||||| ||||| || ||||||
Sbjct: 14387 gagcgcatggttctggatgctgagaagtataaagcggaggatgag 14431
Score = 117 bits (59), Expect = 2e-23
Identities = 176/215 (81%)
Strand = Plus / Minus
Query: 463 gacctgttccgtggcaccctggatcctgtggagaaagcccttcgggatgccaagctagac 522
||||||||||| |||||||||| || |||||||| || || || || || ||||| |||
Sbjct: 1001 gacctgttccgcagcaccctggagccggtggagaaggctctgcgcgacgcgaagctggac 942
Query: 523 aagtctcagatccatgacattgtcctggtgggtggctcaacccgtatccccaagatccag 582
||| | |||||||| ||| | || |||||||| ||||| || || ||||||||| | |||
Sbjct: 941 aaggcccagatccacgacctggtgctggtggggggctcgacgcgcatccccaaggtgcag 882
Query: 583 aagcttctgcaggacttcttcaacgggaaagaactgaataagagcatcaaccccgatgag 642
||||| ||||||||||||||||||||| || || || |||||||||||||| || |||
Sbjct: 881 aagctgctgcaggacttcttcaacgggcgcgacctcaacaagagcatcaacccggacgag 822
Query: 643 gctgttgcttatggtgcagctgtgcaggcagccat 677
|| || || ||||| || || |||||||| |||||
Sbjct: 821 gcggtggcgtatggggcggcggtgcaggcggccat 787
>gb|GL893623.1| Sus scrofa unplaced genomic scaffold chrU_scaffold237
Length = 305
Score = 101 bits (51), Expect = 1e-18
Identities = 165/203 (81%)
Strand = Plus / Minus
Query: 796 accattcctactaagcagacgcagacgttcaccacctactctgacaaccagcctggtgtg 855
||||| ||||| |||||||| ||||| ||||| || || || |||||||| ||||| ||
Sbjct: 277 accatccctacaaagcagacccagactttcactacttattcagacaaccaacctggagtc 218
Query: 856 ctcattcaggtttatgaaggtgagcgtgccatgaccaaggataacaacctgcttggcaag 915
|| || ||||| ||||| |||||| | |||||||||| ||| |||||||| || ||
Sbjct: 217 ctgatccaggtgtatgagggtgagagggccatgaccagggacaacaaccttctggggcgc 158
Query: 916 tttgaactcacaggcatacctccggccccacgaggcgttcctcagattgaagttactttt 975
||||| |||| ||||||||||| |||||||| || || || |||||||| || || ||
Sbjct: 157 tttgagctcagtggcatacctcctgccccacgtggagtgccccagattgaggtgaccttc 98
Query: 976 gatattgatgccaatggcatcct 998
|| ||||||||||||||||||||
Sbjct: 97 gacattgatgccaatggcatcct 75
>Sscrofa_Chr15
|| Length = 157681621
Score = 93.7 bits (47), Expect = 3e-16
Identities = 159/191 (83%), Gaps = 9/191 (4%)
Strand = Plus / Minus
Query: 1522 tgaaggacccaaatttgtagcaaattccatggcagttgtaaagttgagctgctatagtaa 1581
||||| |||||||| | |||||||||| | | |||| |||||| |||||||| ||||||
Sbjct: 104138463 tgaagaacccaaatctatagcaaattctaggacagtcttaaagtggagctgctgtagtaa 104138404
Query: 1582 ataactgggcattcttgatacttgaatatggaatatg--cacagggaaaggaaattacat 1639
|||| ||||||||||| | ||||||||||| |||||| |||||||||||| ||| | ||
Sbjct: 104138403 ataa-tgggcattcttaacacttgaatatgaaatatgtacacagggaaaggtaatgatat 104138345
Query: 1640 tgcactttataagcactgtattgttaagtggaaaatgcaatgtcttaaataaaac--tat 1697
|| |||||| ||| ||| |||| |||||||||||| |||| | ||||||||| |||
Sbjct: 104138344 tgtactttagaagtactatatt-ataagtggaaaat---atgtgtcaaataaaactgtat 104138289
Query: 1698 ttaaaattggc 1708
|||||||||||
Sbjct: 104138288 ttaaaattggc 104138278
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 52,111,065
Number of extensions: 382
Number of successful extensions: 382
Number of sequences better than 1.0e-05: 11
Number of HSP's gapped: 370
Number of HSP's successfully gapped: 36
Length of query: 1767
Length of database: 2,808,509,378
Length adjustment: 22
Effective length of query: 1745
Effective length of database: 2,808,408,574
Effective search space: 4900672961630
Effective search space used: 4900672961630
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)