Animal-Genome cDNA 20110601C-001109

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-001109
         (945 letters)

Database: RefSeq49_BP.fasta 
           33,088 sequences; 17,681,374 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001095550.1| casein kinase 1, delta [Bos taurus].              560   e-160
Alignment   gi|NP_001071577.1| casein kinase 1 epsilon [Bos taurus].             548   e-156
Alignment   gi|NP_777136.1| casein kinase I isoform alpha [Bos taurus].          440   e-124
Alignment   gi|XP_002689948.1| PREDICTED: casein kinase I alpha-like [Bos t...   420   e-117
Alignment   gi|XP_002699872.1| PREDICTED: casein kinase I-like [Bos taurus].     413   e-115
Alignment   gi|XP_002707254.1| PREDICTED: casein kinase I-like [Bos taurus].     413   e-115
Alignment   gi|XP_002700117.1| PREDICTED: casein kinase I-like [Bos taurus].     386   e-107
Alignment   gi|XP_001788962.1| PREDICTED: casein kinase I-like [Bos taurus].     386   e-107
Alignment   gi|NP_001091628.1| casein kinase I isoform beta [Bos taurus].        379   e-105
Alignment   gi|XP_002687979.1| PREDICTED: casein kinase 1, delta [Bos tauru...   374   e-104

>ref|NP_001095550.1| casein kinase 1, delta [Bos taurus].
          Length = 409

 Score =  560 bits (1442), Expect = e-160
 Identities = 273/279 (97%), Positives = 276/279 (98%)
 Frame = +1

Query: 109 MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKFECVKTKHPQLHIESKIYKMMQ 288
           MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIK ECVKTKHPQLHIESKIYKMMQ
Sbjct: 1   MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQ 60

Query: 289 GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 468
           GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH
Sbjct: 61  GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 120

Query: 469 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 648
           SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA
Sbjct: 121 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 180

Query: 649 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAAIQRQKYERISEKKMSTPIEVL 828
           SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAA +RQKYERISEKKMSTPIEVL
Sbjct: 181 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 240

Query: 829 XQGYPSEFATYLNFCRSLRFDDKPDYSYLKQLFRNLFHR 945
            +GYPSEFATYLNFCRSLRFDDKPDYSYL+QLFRNLFHR
Sbjct: 241 CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHR 279


>ref|NP_001071577.1| casein kinase 1 epsilon [Bos taurus].
          Length = 466

 Score =  548 bits (1412), Expect = e-156
 Identities = 265/279 (94%), Positives = 274/279 (98%)
 Frame = +1

Query: 109 MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKFECVKTKHPQLHIESKIYKMMQ 288
           MELRVGN+YRLGRKIGSGSFGDIYLG +IA+GEEVAIK ECVKTKHPQLHIESK YKMMQ
Sbjct: 1   MELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQ 60

Query: 289 GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 468
           GGVGIP+I+WCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH
Sbjct: 61  GGVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 120

Query: 469 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 648
           SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA
Sbjct: 121 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 180

Query: 649 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAAIQRQKYERISEKKMSTPIEVL 828
           SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAA +RQKYERISEKKMSTPIEVL
Sbjct: 181 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 240

Query: 829 XQGYPSEFATYLNFCRSLRFDDKPDYSYLKQLFRNLFHR 945
            +GYPSEF+TYLNFCRSLRFDDKPDYSYL+QLFRNLFHR
Sbjct: 241 CKGYPSEFSTYLNFCRSLRFDDKPDYSYLRQLFRNLFHR 279


>ref|NP_777136.1| casein kinase I isoform alpha [Bos taurus].
          Length = 325

 Score =  440 bits (1132), Expect = e-124
 Identities = 208/276 (75%), Positives = 243/276 (88%)
 Frame = +1

Query: 112 ELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKFECVKTKHPQLHIESKIYKMMQG 291
           E  VG +Y+L RKIGSGSFGDIYL  +I  GEEVA+K E  K +HPQL  ESK+YK++QG
Sbjct: 10  EFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKILQG 69

Query: 292 GVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 471
           GVGIP IRW G E DYNV+VM+LLGPSLEDLFNFCSR+F++KTVL+LADQMISRIEY+H+
Sbjct: 70  GVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYVHT 129

Query: 472 KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYAS 651
           KNFIHRD+KPDNFLMG+G+  N +++IDFGLAKKYRD RT QHIPYRE+KNLTGTARYAS
Sbjct: 130 KNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARYAS 189

Query: 652 INTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAAIQRQKYERISEKKMSTPIEVLX 831
           IN HLGIEQSRRDD+ESLGYVLMYFN  SLPWQGLKAA ++QKYE+ISEKKMSTP+EVL 
Sbjct: 190 INAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATKKQKYEKISEKKMSTPVEVLC 249

Query: 832 QGYPSEFATYLNFCRSLRFDDKPDYSYLKQLFRNLF 939
           +G+P+EFA YLN+CR LRF++ PDY YL+QLFR LF
Sbjct: 250 KGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILF 285


>ref|XP_002689948.1| PREDICTED: casein kinase I alpha-like [Bos taurus].
          Length = 325

 Score =  420 bits (1079), Expect = e-117
 Identities = 198/276 (71%), Positives = 237/276 (85%)
 Frame = +1

Query: 112 ELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKFECVKTKHPQLHIESKIYKMMQG 291
           E  VG +Y+L RKI SGSFGD+YL  +I  GEEVA+K E  K +HPQL  ESK+ K++QG
Sbjct: 10  EFIVGGKYKLVRKIRSGSFGDMYLAINITNGEEVAVKLESQKARHPQLLYESKLCKILQG 69

Query: 292 GVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 471
            VGIP IRW G + DYNV+VM+LLGPSLEDLFNFCSR+F++KTVL+LADQM+ RIEY+H+
Sbjct: 70  EVGIPHIRWYGQQKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMMGRIEYVHT 129

Query: 472 KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYAS 651
           KNFIHRD+KPDNFLMG+G+  N +++IDFGLAKKYRD RT QHIPYRE+KNLTGTARYAS
Sbjct: 130 KNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARYAS 189

Query: 652 INTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAAIQRQKYERISEKKMSTPIEVLX 831
           I+ HLGIEQSRRDD+ESLGYVLMYFN  SLPWQGLKAA ++QKYE+ISEKKMSTP+EVL 
Sbjct: 190 ISAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATKKQKYEKISEKKMSTPVEVLC 249

Query: 832 QGYPSEFATYLNFCRSLRFDDKPDYSYLKQLFRNLF 939
           +G+P+EFA YLN+CR LRF++ PDY YL+ LF  LF
Sbjct: 250 KGFPAEFAMYLNYCRGLRFEEAPDYMYLRHLFHILF 285


>ref|XP_002699872.1| PREDICTED: casein kinase I-like [Bos taurus].
          Length = 333

 Score =  413 bits (1061), Expect = e-115
 Identities = 190/276 (68%), Positives = 235/276 (85%)
 Frame = +1

Query: 112 ELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKFECVKTKHPQLHIESKIYKMMQG 291
           E   G +Y+L RKIGSGSFG +YL  +I  GEEVA+K E  K + PQL  ES++YK++QG
Sbjct: 10  EFIAGGKYKLVRKIGSGSFGKVYLAINITNGEEVAVKLEPQKARQPQLLYESRLYKLLQG 69

Query: 292 GVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 471
           GVGIP I W G E DYNV+VM+LLGPSLE+LFN+CSR+F++KTVL+LADQMISRIEY+H+
Sbjct: 70  GVGIPRIWWYGQEKDYNVLVMDLLGPSLEELFNYCSRRFTMKTVLMLADQMISRIEYLHT 129

Query: 472 KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYAS 651
           K+FIHRD+KPDNFLMG G   N ++++DFGLAK+YRD++T QHIPY+E K+LTGTARYAS
Sbjct: 130 KDFIHRDIKPDNFLMGAGSHCNQLFLVDFGLAKRYRDSKTKQHIPYKEKKSLTGTARYAS 189

Query: 652 INTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAAIQRQKYERISEKKMSTPIEVLX 831
           +N+HLGIEQSRRDD+ESLGYVLMYFN  SLPWQG+K A  +QKYE+I E KM+TPIE L 
Sbjct: 190 LNSHLGIEQSRRDDMESLGYVLMYFNRSSLPWQGIKTATMKQKYEKICESKMATPIEALC 249

Query: 832 QGYPSEFATYLNFCRSLRFDDKPDYSYLKQLFRNLF 939
            G+PSEFATYLN+CR LRF++ PDY+YL+QLFR+LF
Sbjct: 250 NGFPSEFATYLNYCRGLRFEEAPDYTYLRQLFRSLF 285


>ref|XP_002707254.1| PREDICTED: casein kinase I-like [Bos taurus].
          Length = 333

 Score =  413 bits (1061), Expect = e-115
 Identities = 190/276 (68%), Positives = 235/276 (85%)
 Frame = +1

Query: 112 ELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKFECVKTKHPQLHIESKIYKMMQG 291
           E   G +Y+L RKIGSGSFG +YL  +I  GEEVA+K E  K + PQL  ES++YK++QG
Sbjct: 10  EFIAGGKYKLVRKIGSGSFGKVYLAINITNGEEVAVKLEPQKARQPQLLYESRLYKLLQG 69

Query: 292 GVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 471
           GVGIP I W G E DYNV+VM+LLGPSLE+LFN+CSR+F++KTVL+LADQMISRIEY+H+
Sbjct: 70  GVGIPRIWWYGQEKDYNVLVMDLLGPSLEELFNYCSRRFTMKTVLMLADQMISRIEYLHT 129

Query: 472 KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYAS 651
           K+FIHRD+KPDNFLMG G   N ++++DFGLAK+YRD++T QHIPY+E K+LTGTARYAS
Sbjct: 130 KDFIHRDIKPDNFLMGAGSHCNQLFLVDFGLAKRYRDSKTKQHIPYKEKKSLTGTARYAS 189

Query: 652 INTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAAIQRQKYERISEKKMSTPIEVLX 831
           +N+HLGIEQSRRDD+ESLGYVLMYFN  SLPWQG+K A  +QKYE+I E KM+TPIE L 
Sbjct: 190 LNSHLGIEQSRRDDMESLGYVLMYFNRSSLPWQGIKTATMKQKYEKICESKMATPIEALC 249

Query: 832 QGYPSEFATYLNFCRSLRFDDKPDYSYLKQLFRNLF 939
            G+PSEFATYLN+CR LRF++ PDY+YL+QLFR+LF
Sbjct: 250 NGFPSEFATYLNYCRGLRFEEAPDYTYLRQLFRSLF 285


>ref|XP_002700117.1| PREDICTED: casein kinase I-like [Bos taurus].
          Length = 336

 Score =  386 bits (991), Expect = e-107
 Identities = 179/278 (64%), Positives = 228/278 (82%)
 Frame = +1

Query: 112 ELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKFECVKTKHPQLHIESKIYKMMQG 291
           ++ VG RY+L R+IGSGSFG ++L  D+   E+VA+K E   T+ P+L  E ++Y ++QG
Sbjct: 10  DVLVGGRYKLVREIGSGSFGHVHLAIDLTNHEQVAVKLESQNTRQPRLLYEKELYNILQG 69

Query: 292 GVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 471
           GVGIP IRW G E DYNV+VM+LLGPSLEDLFNFCSR+FS+KTVL+LADQMISRIEY+H+
Sbjct: 70  GVGIPQIRWYGQETDYNVLVMDLLGPSLEDLFNFCSRRFSMKTVLMLADQMISRIEYVHT 129

Query: 472 KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYAS 651
           +N IHRD+KP+NFLMG G++   +++IDFGLAKKYRD RT QHIPYR  K+LTGT  +AS
Sbjct: 130 QNLIHRDIKPENFLMGTGQQWKELFLIDFGLAKKYRDNRTGQHIPYRSGKSLTGTPSFAS 189

Query: 652 INTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAAIQRQKYERISEKKMSTPIEVLX 831
           I+ H+GIEQSRRDD+ES+G+VLMYFN GSLPWQGLKAA  +QK E+ISE KM+TP++VL 
Sbjct: 190 ISAHIGIEQSRRDDMESIGHVLMYFNRGSLPWQGLKAATMKQKCEQISEMKMTTPVDVLC 249

Query: 832 QGYPSEFATYLNFCRSLRFDDKPDYSYLKQLFRNLFHR 945
           +G+P+EFA YL  CR L F++ PDY YL+QLF  LF +
Sbjct: 250 KGFPAEFAMYLKHCRGLSFEEAPDYRYLRQLFHMLFRK 287


>ref|XP_001788962.1| PREDICTED: casein kinase I-like [Bos taurus].
          Length = 336

 Score =  386 bits (991), Expect = e-107
 Identities = 179/278 (64%), Positives = 228/278 (82%)
 Frame = +1

Query: 112 ELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKFECVKTKHPQLHIESKIYKMMQG 291
           ++ VG RY+L R+IGSGSFG ++L  D+   E+VA+K E   T+ P+L  E ++Y ++QG
Sbjct: 10  DVLVGGRYKLVREIGSGSFGHVHLAIDLTNHEQVAVKLESQNTRQPRLLYEKELYNILQG 69

Query: 292 GVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 471
           GVGIP IRW G E DYNV+VM+LLGPSLEDLFNFCSR+FS+KTVL+LADQMISRIEY+H+
Sbjct: 70  GVGIPQIRWYGQETDYNVLVMDLLGPSLEDLFNFCSRRFSMKTVLMLADQMISRIEYVHT 129

Query: 472 KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYAS 651
           +N IHRD+KP+NFLMG G++   +++IDFGLAKKYRD RT QHIPYR  K+LTGT  +AS
Sbjct: 130 QNLIHRDIKPENFLMGTGQQWKELFLIDFGLAKKYRDNRTGQHIPYRSGKSLTGTPSFAS 189

Query: 652 INTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAAIQRQKYERISEKKMSTPIEVLX 831
           I+ H+GIEQSRRDD+ES+G+VLMYFN GSLPWQGLKAA  +QK E+ISE KM+TP++VL 
Sbjct: 190 ISAHIGIEQSRRDDMESIGHVLMYFNRGSLPWQGLKAATMKQKCEQISEMKMTTPVDVLC 249

Query: 832 QGYPSEFATYLNFCRSLRFDDKPDYSYLKQLFRNLFHR 945
           +G+P+EFA YL  CR L F++ PDY YL+QLF  LF +
Sbjct: 250 KGFPAEFAMYLKHCRGLSFEEAPDYRYLRQLFHMLFRK 287


>ref|NP_001091628.1| casein kinase I isoform beta [Bos taurus].
          Length = 336

 Score =  379 bits (974), Expect = e-105
 Identities = 179/278 (64%), Positives = 222/278 (79%)
 Frame = +1

Query: 112 ELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKFECVKTKHPQLHIESKIYKMMQG 291
           ++ VG RY+L R+IG GSFG +YL  D+   E+VA+K E   T+ P+L  E ++Y  +QG
Sbjct: 10  DVLVGGRYKLVREIGFGSFGHVYLAIDLTNHEQVAVKLESENTRQPRLLHEKELYNFLQG 69

Query: 292 GVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 471
           GVGIP IRW G E DYNV+VM+LLGPSLEDLFNFCSR+FS+KTVL+LADQMISRIEY+HS
Sbjct: 70  GVGIPQIRWYGQETDYNVLVMDLLGPSLEDLFNFCSRRFSMKTVLMLADQMISRIEYVHS 129

Query: 472 KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYAS 651
           +N IHRD+KPDNFLMG G +   ++++DFGLAKKYRD RT QHIP+R  K+  GT   AS
Sbjct: 130 RNLIHRDIKPDNFLMGTGPQWKKLFLVDFGLAKKYRDNRTGQHIPHRSGKSFIGTPFCAS 189

Query: 652 INTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAAIQRQKYERISEKKMSTPIEVLX 831
           I+ HLGIEQSRRDD+ES+GYVLMYFN GSLPWQGLKAA  +QK E+ISE KM+TP++VL 
Sbjct: 190 ISAHLGIEQSRRDDMESIGYVLMYFNRGSLPWQGLKAATLKQKCEKISEMKMTTPVDVLC 249

Query: 832 QGYPSEFATYLNFCRSLRFDDKPDYSYLKQLFRNLFHR 945
           +G+P EFA YL +C  L F++ PDY YL+QLFR LF +
Sbjct: 250 KGFPIEFAMYLKYCLRLSFEEAPDYRYLRQLFRLLFRK 287


>ref|XP_002687979.1| PREDICTED: casein kinase 1, delta [Bos taurus].
          Length = 259

 Score =  374 bits (961), Expect = e-104
 Identities = 184/202 (91%), Positives = 191/202 (94%)
 Frame = +1

Query: 109 MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKFECVKTKHPQLHIESKIYKMMQ 288
           MELRVGN+YRLGRKIGSGSFGDIYLG +IA+GEEVAIK ECVKTKHPQLHIESK YKMMQ
Sbjct: 1   MELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQ 60

Query: 289 GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 468
           GGVGIP+I+WCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH
Sbjct: 61  GGVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 120

Query: 469 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 648
           SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA
Sbjct: 121 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 180

Query: 649 SINTHLGIEQSRRDDLESLGYV 714
           SINTHLGI +  R    S GY+
Sbjct: 181 SINTHLGIGECARPG--SRGYL 200


  Database: RefSeq49_BP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 17,681,374
  Number of sequences in database:  33,088
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 31,258,790
Number of extensions: 821900
Number of successful extensions: 5498
Number of sequences better than 1.0e-05: 196
Number of HSP's gapped: 5181
Number of HSP's successfully gapped: 196
Length of query: 315
Length of database: 17,681,374
Length adjustment: 102
Effective length of query: 213
Effective length of database: 14,306,398
Effective search space: 3047262774
Effective search space used: 3047262774
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-001109
         (945 letters)

Database: RefSeq49_CP.fasta 
           33,336 sequences; 18,874,504 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_861014.1| PREDICTED: similar to casein kinase 1 epsilon i...   548   e-156
Alignment   gi|XP_860987.1| PREDICTED: similar to casein kinase 1 epsilon i...   548   e-156
Alignment   gi|XP_531738.2| PREDICTED: similar to casein kinase 1 epsilon i...   548   e-156
Alignment   gi|XP_850168.1| PREDICTED: similar to casein kinase 1 epsilon i...   548   e-156
Alignment   gi|XP_533137.2| PREDICTED: similar to casein kinase 1, delta is...   508   e-144
Alignment   gi|XP_860927.1| PREDICTED: similar to casein kinase 1 epsilon i...   496   e-140
Alignment   gi|XP_867771.1| PREDICTED: similar to casein kinase 1, alpha 1 ...   440   e-124
Alignment   gi|XP_536470.2| PREDICTED: similar to Casein kinase I, alpha is...   440   e-124
Alignment   gi|XP_867638.1| PREDICTED: similar to Casein kinase I, alpha is...   440   e-124
Alignment   gi|XP_867736.1| PREDICTED: similar to Casein kinase I, alpha is...   439   e-123

>ref|XP_861014.1| PREDICTED: similar to casein kinase 1 epsilon isoform 8 [Canis
           familiaris].
          Length = 385

 Score =  548 bits (1412), Expect = e-156
 Identities = 265/279 (94%), Positives = 274/279 (98%)
 Frame = +1

Query: 109 MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKFECVKTKHPQLHIESKIYKMMQ 288
           MELRVGN+YRLGRKIGSGSFGDIYLG +IA+GEEVAIK ECVKTKHPQLHIESK YKMMQ
Sbjct: 1   MELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQ 60

Query: 289 GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 468
           GGVGIP+I+WCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH
Sbjct: 61  GGVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 120

Query: 469 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 648
           SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA
Sbjct: 121 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 180

Query: 649 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAAIQRQKYERISEKKMSTPIEVL 828
           SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAA +RQKYERISEKKMSTPIEVL
Sbjct: 181 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 240

Query: 829 XQGYPSEFATYLNFCRSLRFDDKPDYSYLKQLFRNLFHR 945
            +GYPSEF+TYLNFCRSLRFDDKPDYSYL+QLFRNLFHR
Sbjct: 241 CKGYPSEFSTYLNFCRSLRFDDKPDYSYLRQLFRNLFHR 279


>ref|XP_860987.1| PREDICTED: similar to casein kinase 1 epsilon isoform 7 [Canis
           familiaris].
          Length = 431

 Score =  548 bits (1412), Expect = e-156
 Identities = 265/279 (94%), Positives = 274/279 (98%)
 Frame = +1

Query: 109 MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKFECVKTKHPQLHIESKIYKMMQ 288
           MELRVGN+YRLGRKIGSGSFGDIYLG +IA+GEEVAIK ECVKTKHPQLHIESK YKMMQ
Sbjct: 1   MELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQ 60

Query: 289 GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 468
           GGVGIP+I+WCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH
Sbjct: 61  GGVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 120

Query: 469 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 648
           SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA
Sbjct: 121 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 180

Query: 649 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAAIQRQKYERISEKKMSTPIEVL 828
           SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAA +RQKYERISEKKMSTPIEVL
Sbjct: 181 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 240

Query: 829 XQGYPSEFATYLNFCRSLRFDDKPDYSYLKQLFRNLFHR 945
            +GYPSEF+TYLNFCRSLRFDDKPDYSYL+QLFRNLFHR
Sbjct: 241 CKGYPSEFSTYLNFCRSLRFDDKPDYSYLRQLFRNLFHR 279


>ref|XP_531738.2| PREDICTED: similar to casein kinase 1 epsilon isoform 1 [Canis
           familiaris].
          Length = 367

 Score =  548 bits (1412), Expect = e-156
 Identities = 265/279 (94%), Positives = 274/279 (98%)
 Frame = +1

Query: 109 MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKFECVKTKHPQLHIESKIYKMMQ 288
           MELRVGN+YRLGRKIGSGSFGDIYLG +IA+GEEVAIK ECVKTKHPQLHIESK YKMMQ
Sbjct: 1   MELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQ 60

Query: 289 GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 468
           GGVGIP+I+WCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH
Sbjct: 61  GGVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 120

Query: 469 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 648
           SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA
Sbjct: 121 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 180

Query: 649 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAAIQRQKYERISEKKMSTPIEVL 828
           SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAA +RQKYERISEKKMSTPIEVL
Sbjct: 181 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 240

Query: 829 XQGYPSEFATYLNFCRSLRFDDKPDYSYLKQLFRNLFHR 945
            +GYPSEF+TYLNFCRSLRFDDKPDYSYL+QLFRNLFHR
Sbjct: 241 CKGYPSEFSTYLNFCRSLRFDDKPDYSYLRQLFRNLFHR 279


>ref|XP_850168.1| PREDICTED: similar to casein kinase 1 epsilon isoform 3 [Canis
           familiaris].
          Length = 416

 Score =  548 bits (1412), Expect = e-156
 Identities = 265/279 (94%), Positives = 274/279 (98%)
 Frame = +1

Query: 109 MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKFECVKTKHPQLHIESKIYKMMQ 288
           MELRVGN+YRLGRKIGSGSFGDIYLG +IA+GEEVAIK ECVKTKHPQLHIESK YKMMQ
Sbjct: 1   MELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQ 60

Query: 289 GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 468
           GGVGIP+I+WCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH
Sbjct: 61  GGVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 120

Query: 469 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 648
           SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA
Sbjct: 121 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 180

Query: 649 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAAIQRQKYERISEKKMSTPIEVL 828
           SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAA +RQKYERISEKKMSTPIEVL
Sbjct: 181 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 240

Query: 829 XQGYPSEFATYLNFCRSLRFDDKPDYSYLKQLFRNLFHR 945
            +GYPSEF+TYLNFCRSLRFDDKPDYSYL+QLFRNLFHR
Sbjct: 241 CKGYPSEFSTYLNFCRSLRFDDKPDYSYLRQLFRNLFHR 279


>ref|XP_533137.2| PREDICTED: similar to casein kinase 1, delta isoform 2 [Canis
           familiaris].
          Length = 393

 Score =  508 bits (1307), Expect = e-144
 Identities = 247/254 (97%), Positives = 250/254 (98%)
 Frame = +1

Query: 184 GTDIAAGEEVAIKFECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL 363
           GTDIAAGEEVAIK ECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL
Sbjct: 10  GTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL 69

Query: 364 GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLV 543
           GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLV
Sbjct: 70  GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLV 129

Query: 544 YIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMY 723
           YIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMY
Sbjct: 130 YIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMY 189

Query: 724 FNLGSLPWQGLKAAIQRQKYERISEKKMSTPIEVLXQGYPSEFATYLNFCRSLRFDDKPD 903
           FNLGSLPWQGLKAA +RQKYERISEKKMSTPIEVL + YPSEFATYLNFCRSLRFDDKPD
Sbjct: 190 FNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKSYPSEFATYLNFCRSLRFDDKPD 249

Query: 904 YSYLKQLFRNLFHR 945
           YSYL+QLFRNLFHR
Sbjct: 250 YSYLRQLFRNLFHR 263


>ref|XP_860927.1| PREDICTED: similar to casein kinase 1 epsilon isoform 6 [Canis
           familiaris].
          Length = 407

 Score =  496 bits (1277), Expect = e-140
 Identities = 246/279 (88%), Positives = 259/279 (92%)
 Frame = +1

Query: 109 MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKFECVKTKHPQLHIESKIYKMMQ 288
           MELRVGN+YRLGRKIGSGSFGDIYLG +IA+GEEVAIK ECVKTKHPQLHIESK YKMMQ
Sbjct: 1   MELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQ 60

Query: 289 GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 468
           GGVGIP+I+WCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH
Sbjct: 61  GGVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 120

Query: 469 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 648
           SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA
Sbjct: 121 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 180

Query: 649 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAAIQRQKYERISEKKMSTPIEVL 828
           SINTHLGI +       S+G ++      SLPWQGLKAA +RQKYERISEKKMSTPIEVL
Sbjct: 181 SINTHLGIGEP-----FSVGGMI----TRSLPWQGLKAATKRQKYERISEKKMSTPIEVL 231

Query: 829 XQGYPSEFATYLNFCRSLRFDDKPDYSYLKQLFRNLFHR 945
            +GYPSEF+TYLNFCRSLRFDDKPDYSYL+QLFRNLFHR
Sbjct: 232 CKGYPSEFSTYLNFCRSLRFDDKPDYSYLRQLFRNLFHR 270


>ref|XP_867771.1| PREDICTED: similar to casein kinase 1, alpha 1 isoform 15 [Canis
           familiaris].
          Length = 325

 Score =  440 bits (1132), Expect = e-124
 Identities = 208/276 (75%), Positives = 243/276 (88%)
 Frame = +1

Query: 112 ELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKFECVKTKHPQLHIESKIYKMMQG 291
           E  VG +Y+L RKIGSGSFGDIYL  +I  GEEVA+K E  K +HPQL  ESK+YK++QG
Sbjct: 10  EFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKILQG 69

Query: 292 GVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 471
           GVGIP IRW G E DYNV+VM+LLGPSLEDLFNFCSR+F++KTVL+LADQMISRIEY+H+
Sbjct: 70  GVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYVHT 129

Query: 472 KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYAS 651
           KNFIHRD+KPDNFLMG+G+  N +++IDFGLAKKYRD RT QHIPYRE+KNLTGTARYAS
Sbjct: 130 KNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARYAS 189

Query: 652 INTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAAIQRQKYERISEKKMSTPIEVLX 831
           IN HLGIEQSRRDD+ESLGYVLMYFN  SLPWQGLKAA ++QKYE+ISEKKMSTP+EVL 
Sbjct: 190 INAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATKKQKYEKISEKKMSTPVEVLC 249

Query: 832 QGYPSEFATYLNFCRSLRFDDKPDYSYLKQLFRNLF 939
           +G+P+EFA YLN+CR LRF++ PDY YL+QLFR LF
Sbjct: 250 KGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILF 285


>ref|XP_536470.2| PREDICTED: similar to Casein kinase I, alpha isoform (CKI-alpha)
           (CK1) isoform 1 [Canis familiaris].
          Length = 337

 Score =  440 bits (1132), Expect = e-124
 Identities = 208/276 (75%), Positives = 243/276 (88%)
 Frame = +1

Query: 112 ELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKFECVKTKHPQLHIESKIYKMMQG 291
           E  VG +Y+L RKIGSGSFGDIYL  +I  GEEVA+K E  K +HPQL  ESK+YK++QG
Sbjct: 10  EFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKILQG 69

Query: 292 GVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 471
           GVGIP IRW G E DYNV+VM+LLGPSLEDLFNFCSR+F++KTVL+LADQMISRIEY+H+
Sbjct: 70  GVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYVHT 129

Query: 472 KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYAS 651
           KNFIHRD+KPDNFLMG+G+  N +++IDFGLAKKYRD RT QHIPYRE+KNLTGTARYAS
Sbjct: 130 KNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARYAS 189

Query: 652 INTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAAIQRQKYERISEKKMSTPIEVLX 831
           IN HLGIEQSRRDD+ESLGYVLMYFN  SLPWQGLKAA ++QKYE+ISEKKMSTP+EVL 
Sbjct: 190 INAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATKKQKYEKISEKKMSTPVEVLC 249

Query: 832 QGYPSEFATYLNFCRSLRFDDKPDYSYLKQLFRNLF 939
           +G+P+EFA YLN+CR LRF++ PDY YL+QLFR LF
Sbjct: 250 KGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILF 285


>ref|XP_867638.1| PREDICTED: similar to Casein kinase I, alpha isoform (CKI-alpha)
           (CK1) isoform 3 [Canis familiaris].
          Length = 336

 Score =  440 bits (1132), Expect = e-124
 Identities = 208/276 (75%), Positives = 243/276 (88%)
 Frame = +1

Query: 112 ELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKFECVKTKHPQLHIESKIYKMMQG 291
           E  VG +Y+L RKIGSGSFGDIYL  +I  GEEVA+K E  K +HPQL  ESK+YK++QG
Sbjct: 10  EFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKILQG 69

Query: 292 GVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 471
           GVGIP IRW G E DYNV+VM+LLGPSLEDLFNFCSR+F++KTVL+LADQMISRIEY+H+
Sbjct: 70  GVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYVHT 129

Query: 472 KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYAS 651
           KNFIHRD+KPDNFLMG+G+  N +++IDFGLAKKYRD RT QHIPYRE+KNLTGTARYAS
Sbjct: 130 KNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARYAS 189

Query: 652 INTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAAIQRQKYERISEKKMSTPIEVLX 831
           IN HLGIEQSRRDD+ESLGYVLMYFN  SLPWQGLKAA ++QKYE+ISEKKMSTP+EVL 
Sbjct: 190 INAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATKKQKYEKISEKKMSTPVEVLC 249

Query: 832 QGYPSEFATYLNFCRSLRFDDKPDYSYLKQLFRNLF 939
           +G+P+EFA YLN+CR LRF++ PDY YL+QLFR LF
Sbjct: 250 KGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILF 285


>ref|XP_867736.1| PREDICTED: similar to Casein kinase I, alpha isoform (CKI-alpha)
           (CK1) isoform 12 [Canis familiaris].
          Length = 341

 Score =  439 bits (1130), Expect = e-123
 Identities = 210/280 (75%), Positives = 245/280 (87%), Gaps = 4/280 (1%)
 Frame = +1

Query: 112 ELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKFECVKTKHPQLHIESKIYKMMQG 291
           E  VG +Y+L RKIGSGSFGDIYL  +I  GEEVA+K E  K +HPQL  ESK+YK++QG
Sbjct: 10  EFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKILQG 69

Query: 292 GVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 471
           GVGIP IRW G E DYNV+VM+LLGPSLEDLFNFCSR+F++KTVL+LADQMISRIEY+H+
Sbjct: 70  GVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYVHT 129

Query: 472 KNFIHRDVKPDNFLMGLG----KKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTA 639
           KNFIHRD+KPDNFLMG+G    K G+L+++IDFGLAKKYRD RT QHIPYRE+KNLTGTA
Sbjct: 130 KNFIHRDIKPDNFLMGIGRHCNKTGSLLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTA 189

Query: 640 RYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAAIQRQKYERISEKKMSTPI 819
           RYASIN HLGIEQSRRDD+ESLGYVLMYFN  SLPWQGLKAA ++QKYE+ISEKKMSTP+
Sbjct: 190 RYASINAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATKKQKYEKISEKKMSTPV 249

Query: 820 EVLXQGYPSEFATYLNFCRSLRFDDKPDYSYLKQLFRNLF 939
           EVL +G+P+EFA YLN+CR LRF++ PDY YL+QLFR LF
Sbjct: 250 EVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILF 289


  Database: RefSeq49_CP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,874,504
  Number of sequences in database:  33,336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 32,864,994
Number of extensions: 860332
Number of successful extensions: 6198
Number of sequences better than 1.0e-05: 348
Number of HSP's gapped: 5740
Number of HSP's successfully gapped: 351
Length of query: 315
Length of database: 18,874,504
Length adjustment: 103
Effective length of query: 212
Effective length of database: 15,440,896
Effective search space: 3273469952
Effective search space used: 3273469952
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-001109
         (945 letters)

Database: RefSeq49_HP.fasta 
           32,964 sequences; 18,297,164 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_620693.1| casein kinase I isoform delta isoform 2 [Homo s...   560   e-160
Alignment   gi|NP_001884.2| casein kinase I isoform delta isoform 1 [Homo s...   560   e-160
Alignment   gi|NP_689407.1| casein kinase I isoform epsilon [Homo sapiens].      548   e-156
Alignment   gi|NP_001885.1| casein kinase I isoform epsilon [Homo sapiens].      548   e-156
Alignment   gi|NP_001883.4| casein kinase I isoform alpha isoform 2 [Homo s...   440   e-124
Alignment   gi|NP_001020276.1| casein kinase I isoform alpha isoform 1 [Hom...   425   e-119
Alignment   gi|NP_660204.2| casein kinase I isoform alpha-like [Homo sapien...   419   e-117
Alignment   gi|NP_001038188.1| casein kinase I isoform gamma-3 isoform 4 [H...   334   6e-92
Alignment   gi|NP_001038187.1| casein kinase I isoform gamma-3 isoform 3 [H...   334   6e-92
Alignment   gi|NP_001026982.1| casein kinase I isoform gamma-3 isoform 2 [H...   334   6e-92

>ref|NP_620693.1| casein kinase I isoform delta isoform 2 [Homo sapiens].
          Length = 409

 Score =  560 bits (1442), Expect = e-160
 Identities = 273/279 (97%), Positives = 276/279 (98%)
 Frame = +1

Query: 109 MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKFECVKTKHPQLHIESKIYKMMQ 288
           MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIK ECVKTKHPQLHIESKIYKMMQ
Sbjct: 1   MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQ 60

Query: 289 GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 468
           GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH
Sbjct: 61  GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 120

Query: 469 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 648
           SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA
Sbjct: 121 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 180

Query: 649 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAAIQRQKYERISEKKMSTPIEVL 828
           SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAA +RQKYERISEKKMSTPIEVL
Sbjct: 181 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 240

Query: 829 XQGYPSEFATYLNFCRSLRFDDKPDYSYLKQLFRNLFHR 945
            +GYPSEFATYLNFCRSLRFDDKPDYSYL+QLFRNLFHR
Sbjct: 241 CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHR 279


>ref|NP_001884.2| casein kinase I isoform delta isoform 1 [Homo sapiens].
          Length = 415

 Score =  560 bits (1442), Expect = e-160
 Identities = 273/279 (97%), Positives = 276/279 (98%)
 Frame = +1

Query: 109 MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKFECVKTKHPQLHIESKIYKMMQ 288
           MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIK ECVKTKHPQLHIESKIYKMMQ
Sbjct: 1   MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQ 60

Query: 289 GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 468
           GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH
Sbjct: 61  GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 120

Query: 469 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 648
           SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA
Sbjct: 121 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 180

Query: 649 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAAIQRQKYERISEKKMSTPIEVL 828
           SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAA +RQKYERISEKKMSTPIEVL
Sbjct: 181 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 240

Query: 829 XQGYPSEFATYLNFCRSLRFDDKPDYSYLKQLFRNLFHR 945
            +GYPSEFATYLNFCRSLRFDDKPDYSYL+QLFRNLFHR
Sbjct: 241 CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHR 279


>ref|NP_689407.1| casein kinase I isoform epsilon [Homo sapiens].
          Length = 416

 Score =  548 bits (1412), Expect = e-156
 Identities = 265/279 (94%), Positives = 274/279 (98%)
 Frame = +1

Query: 109 MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKFECVKTKHPQLHIESKIYKMMQ 288
           MELRVGN+YRLGRKIGSGSFGDIYLG +IA+GEEVAIK ECVKTKHPQLHIESK YKMMQ
Sbjct: 1   MELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQ 60

Query: 289 GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 468
           GGVGIP+I+WCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH
Sbjct: 61  GGVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 120

Query: 469 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 648
           SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA
Sbjct: 121 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 180

Query: 649 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAAIQRQKYERISEKKMSTPIEVL 828
           SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAA +RQKYERISEKKMSTPIEVL
Sbjct: 181 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 240

Query: 829 XQGYPSEFATYLNFCRSLRFDDKPDYSYLKQLFRNLFHR 945
            +GYPSEF+TYLNFCRSLRFDDKPDYSYL+QLFRNLFHR
Sbjct: 241 CKGYPSEFSTYLNFCRSLRFDDKPDYSYLRQLFRNLFHR 279


>ref|NP_001885.1| casein kinase I isoform epsilon [Homo sapiens].
          Length = 416

 Score =  548 bits (1412), Expect = e-156
 Identities = 265/279 (94%), Positives = 274/279 (98%)
 Frame = +1

Query: 109 MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKFECVKTKHPQLHIESKIYKMMQ 288
           MELRVGN+YRLGRKIGSGSFGDIYLG +IA+GEEVAIK ECVKTKHPQLHIESK YKMMQ
Sbjct: 1   MELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQ 60

Query: 289 GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 468
           GGVGIP+I+WCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH
Sbjct: 61  GGVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 120

Query: 469 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 648
           SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA
Sbjct: 121 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 180

Query: 649 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAAIQRQKYERISEKKMSTPIEVL 828
           SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAA +RQKYERISEKKMSTPIEVL
Sbjct: 181 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 240

Query: 829 XQGYPSEFATYLNFCRSLRFDDKPDYSYLKQLFRNLFHR 945
            +GYPSEF+TYLNFCRSLRFDDKPDYSYL+QLFRNLFHR
Sbjct: 241 CKGYPSEFSTYLNFCRSLRFDDKPDYSYLRQLFRNLFHR 279


>ref|NP_001883.4| casein kinase I isoform alpha isoform 2 [Homo sapiens].
          Length = 337

 Score =  440 bits (1132), Expect = e-124
 Identities = 208/276 (75%), Positives = 243/276 (88%)
 Frame = +1

Query: 112 ELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKFECVKTKHPQLHIESKIYKMMQG 291
           E  VG +Y+L RKIGSGSFGDIYL  +I  GEEVA+K E  K +HPQL  ESK+YK++QG
Sbjct: 10  EFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKILQG 69

Query: 292 GVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 471
           GVGIP IRW G E DYNV+VM+LLGPSLEDLFNFCSR+F++KTVL+LADQMISRIEY+H+
Sbjct: 70  GVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYVHT 129

Query: 472 KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYAS 651
           KNFIHRD+KPDNFLMG+G+  N +++IDFGLAKKYRD RT QHIPYRE+KNLTGTARYAS
Sbjct: 130 KNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARYAS 189

Query: 652 INTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAAIQRQKYERISEKKMSTPIEVLX 831
           IN HLGIEQSRRDD+ESLGYVLMYFN  SLPWQGLKAA ++QKYE+ISEKKMSTP+EVL 
Sbjct: 190 INAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATKKQKYEKISEKKMSTPVEVLC 249

Query: 832 QGYPSEFATYLNFCRSLRFDDKPDYSYLKQLFRNLF 939
           +G+P+EFA YLN+CR LRF++ PDY YL+QLFR LF
Sbjct: 250 KGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILF 285


>ref|NP_001020276.1| casein kinase I isoform alpha isoform 1 [Homo sapiens].
          Length = 365

 Score =  425 bits (1093), Expect = e-119
 Identities = 208/304 (68%), Positives = 243/304 (79%), Gaps = 28/304 (9%)
 Frame = +1

Query: 112 ELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKFECVKTKHPQLHIESKIYKMMQG 291
           E  VG +Y+L RKIGSGSFGDIYL  +I  GEEVA+K E  K +HPQL  ESK+YK++QG
Sbjct: 10  EFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKILQG 69

Query: 292 GVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 471
           GVGIP IRW G E DYNV+VM+LLGPSLEDLFNFCSR+F++KTVL+LADQMISRIEY+H+
Sbjct: 70  GVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYVHT 129

Query: 472 KNFIHRDVKPDNFLMGLGKKGNL----------------------------VYIIDFGLA 567
           KNFIHRD+KPDNFLMG+G+  N                             +++IDFGLA
Sbjct: 130 KNFIHRDIKPDNFLMGIGRHCNKCLESPVGKRKRSMTVSTSQDPSFSGLNQLFLIDFGLA 189

Query: 568 KKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPW 747
           KKYRD RT QHIPYRE+KNLTGTARYASIN HLGIEQSRRDD+ESLGYVLMYFN  SLPW
Sbjct: 190 KKYRDNRTRQHIPYREDKNLTGTARYASINAHLGIEQSRRDDMESLGYVLMYFNRTSLPW 249

Query: 748 QGLKAAIQRQKYERISEKKMSTPIEVLXQGYPSEFATYLNFCRSLRFDDKPDYSYLKQLF 927
           QGLKAA ++QKYE+ISEKKMSTP+EVL +G+P+EFA YLN+CR LRF++ PDY YL+QLF
Sbjct: 250 QGLKAATKKQKYEKISEKKMSTPVEVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLF 309

Query: 928 RNLF 939
           R LF
Sbjct: 310 RILF 313


>ref|NP_660204.2| casein kinase I isoform alpha-like [Homo sapiens].
          Length = 337

 Score =  419 bits (1078), Expect = e-117
 Identities = 197/276 (71%), Positives = 235/276 (85%)
 Frame = +1

Query: 112 ELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKFECVKTKHPQLHIESKIYKMMQG 291
           EL VG +Y+L RKIGSGSFGD+YLG     GE+VA+K E  K KHPQL  ESK+Y ++QG
Sbjct: 10  ELVVGGKYKLVRKIGSGSFGDVYLGITTTNGEDVAVKLESQKVKHPQLLYESKLYTILQG 69

Query: 292 GVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 471
           GVGIP + W G E D NV+VM+LLGPSLEDLFNFCSR+F++KTVL+LADQMISRIEY+H+
Sbjct: 70  GVGIPHMHWYGQEKDNNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYVHT 129

Query: 472 KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYAS 651
           KNF+HRD+KPDNFLMG G+  N +++IDFGLAKKYRD RT QHIPYRE+K+L GT RYAS
Sbjct: 130 KNFLHRDIKPDNFLMGTGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKHLIGTVRYAS 189

Query: 652 INTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAAIQRQKYERISEKKMSTPIEVLX 831
           IN HLGIEQSRRDD+ESLGYV MYFN  SLPWQGL+A  ++QKYE+ISEKKMSTP+EVL 
Sbjct: 190 INAHLGIEQSRRDDMESLGYVFMYFNRTSLPWQGLRAMTKKQKYEKISEKKMSTPVEVLC 249

Query: 832 QGYPSEFATYLNFCRSLRFDDKPDYSYLKQLFRNLF 939
           +G+P+EFA YLN+CR LRF++ PDY YL+QLFR LF
Sbjct: 250 KGFPAEFAMYLNYCRGLRFEEVPDYMYLRQLFRILF 285


>ref|NP_001038188.1| casein kinase I isoform gamma-3 isoform 4 [Homo sapiens].
          Length = 455

 Score =  334 bits (857), Expect = 6e-92
 Identities = 169/306 (55%), Positives = 223/306 (72%), Gaps = 2/306 (0%)
 Frame = +1

Query: 34  KGDLGPGDPSPSAAGRGRTGLAEAAMELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEV 213
           K D     PS  +    R   + ++  L VG  +R+G+KIG G+FG++ LG ++   E V
Sbjct: 10  KSDDRMARPSGRSGHNTRGTGSSSSGVLMVGPNFRVGKKIGCGNFGELRLGKNLYTNEYV 69

Query: 214 AIKFECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNF 393
           AIK E +K++ PQLH+E + YK +  G GIP + + G  G YN MV+ELLGPSLEDLF+ 
Sbjct: 70  AIKLEPMKSRAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELLGPSLEDLFDL 129

Query: 394 CSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGL--GKKGNLVYIIDFGLA 567
           C R FSLKTVL++A Q+ISR+EY+HSKN I+RDVKP+NFL+G    K   +++IIDFGLA
Sbjct: 130 CDRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFGLA 189

Query: 568 KKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPW 747
           K+Y D  T +HIPYRE+K+LTGTARY SINTHLG EQSRRDDLE+LG++ MYF  GSLPW
Sbjct: 190 KEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPW 249

Query: 748 QGLKAAIQRQKYERISEKKMSTPIEVLXQGYPSEFATYLNFCRSLRFDDKPDYSYLKQLF 927
           QGLKA   +++Y++I + K +TPIEVL + +P E ATYL + R L F +KPDY YL++LF
Sbjct: 250 QGLKADTLKERYQKIGDTKRATPIEVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLF 308

Query: 928 RNLFHR 945
            +LF R
Sbjct: 309 TDLFDR 314


>ref|NP_001038187.1| casein kinase I isoform gamma-3 isoform 3 [Homo sapiens].
          Length = 415

 Score =  334 bits (857), Expect = 6e-92
 Identities = 169/306 (55%), Positives = 223/306 (72%), Gaps = 2/306 (0%)
 Frame = +1

Query: 34  KGDLGPGDPSPSAAGRGRTGLAEAAMELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEV 213
           K D     PS  +    R   + ++  L VG  +R+G+KIG G+FG++ LG ++   E V
Sbjct: 10  KSDDRMARPSGRSGHNTRGTGSSSSGVLMVGPNFRVGKKIGCGNFGELRLGKNLYTNEYV 69

Query: 214 AIKFECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNF 393
           AIK E +K++ PQLH+E + YK +  G GIP + + G  G YN MV+ELLGPSLEDLF+ 
Sbjct: 70  AIKLEPMKSRAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELLGPSLEDLFDL 129

Query: 394 CSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGL--GKKGNLVYIIDFGLA 567
           C R FSLKTVL++A Q+ISR+EY+HSKN I+RDVKP+NFL+G    K   +++IIDFGLA
Sbjct: 130 CDRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFGLA 189

Query: 568 KKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPW 747
           K+Y D  T +HIPYRE+K+LTGTARY SINTHLG EQSRRDDLE+LG++ MYF  GSLPW
Sbjct: 190 KEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPW 249

Query: 748 QGLKAAIQRQKYERISEKKMSTPIEVLXQGYPSEFATYLNFCRSLRFDDKPDYSYLKQLF 927
           QGLKA   +++Y++I + K +TPIEVL + +P E ATYL + R L F +KPDY YL++LF
Sbjct: 250 QGLKADTLKERYQKIGDTKRATPIEVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLF 308

Query: 928 RNLFHR 945
            +LF R
Sbjct: 309 TDLFDR 314


>ref|NP_001026982.1| casein kinase I isoform gamma-3 isoform 2 [Homo sapiens].
          Length = 423

 Score =  334 bits (857), Expect = 6e-92
 Identities = 169/306 (55%), Positives = 223/306 (72%), Gaps = 2/306 (0%)
 Frame = +1

Query: 34  KGDLGPGDPSPSAAGRGRTGLAEAAMELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEV 213
           K D     PS  +    R   + ++  L VG  +R+G+KIG G+FG++ LG ++   E V
Sbjct: 10  KSDDRMARPSGRSGHNTRGTGSSSSGVLMVGPNFRVGKKIGCGNFGELRLGKNLYTNEYV 69

Query: 214 AIKFECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNF 393
           AIK E +K++ PQLH+E + YK +  G GIP + + G  G YN MV+ELLGPSLEDLF+ 
Sbjct: 70  AIKLEPMKSRAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELLGPSLEDLFDL 129

Query: 394 CSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGL--GKKGNLVYIIDFGLA 567
           C R FSLKTVL++A Q+ISR+EY+HSKN I+RDVKP+NFL+G    K   +++IIDFGLA
Sbjct: 130 CDRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFGLA 189

Query: 568 KKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPW 747
           K+Y D  T +HIPYRE+K+LTGTARY SINTHLG EQSRRDDLE+LG++ MYF  GSLPW
Sbjct: 190 KEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPW 249

Query: 748 QGLKAAIQRQKYERISEKKMSTPIEVLXQGYPSEFATYLNFCRSLRFDDKPDYSYLKQLF 927
           QGLKA   +++Y++I + K +TPIEVL + +P E ATYL + R L F +KPDY YL++LF
Sbjct: 250 QGLKADTLKERYQKIGDTKRATPIEVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLF 308

Query: 928 RNLFHR 945
            +LF R
Sbjct: 309 TDLFDR 314


  Database: RefSeq49_HP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,297,164
  Number of sequences in database:  32,964
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 31,974,324
Number of extensions: 834710
Number of successful extensions: 5891
Number of sequences better than 1.0e-05: 301
Number of HSP's gapped: 5379
Number of HSP's successfully gapped: 301
Length of query: 315
Length of database: 18,297,164
Length adjustment: 102
Effective length of query: 213
Effective length of database: 14,934,836
Effective search space: 3181120068
Effective search space used: 3181120068
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-001109
         (945 letters)

Database: RefSeq49_MP.fasta 
           30,036 sequences; 15,617,559 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_620690.1| casein kinase I isoform delta isoform 1 [Mus mu...   560   e-160
Alignment   gi|NP_082150.1| casein kinase I isoform delta isoform 2 [Mus mu...   560   e-160
Alignment   gi|NP_038795.3| casein kinase I isoform epsilon [Mus musculus].      548   e-156
Alignment   gi|NP_666199.1| casein kinase I isoform alpha [Mus musculus].        440   e-124
Alignment   gi|NP_690022.2| casein kinase I isoform gamma-3 [Mus musculus].      338   3e-93
Alignment   gi|NP_775277.2| casein kinase I isoform gamma-1 [Mus musculus].      335   3e-92
Alignment   gi|NP_001153063.1| casein kinase I isoform gamma-2 isoform 2 [M...   332   2e-91
Alignment   gi|NP_598763.1| casein kinase I isoform gamma-2 isoform 1 [Mus ...   318   3e-87
Alignment   gi|NP_001156336.1| tau-tubulin kinase 1 [Mus musculus].              169   4e-42
Alignment   gi|NP_001020028.1| tau-tubulin kinase 2 isoform 2 [Mus musculus].    163   2e-40

>ref|NP_620690.1| casein kinase I isoform delta isoform 1 [Mus musculus].
          Length = 415

 Score =  560 bits (1442), Expect = e-160
 Identities = 273/279 (97%), Positives = 276/279 (98%)
 Frame = +1

Query: 109 MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKFECVKTKHPQLHIESKIYKMMQ 288
           MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIK ECVKTKHPQLHIESKIYKMMQ
Sbjct: 1   MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQ 60

Query: 289 GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 468
           GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH
Sbjct: 61  GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 120

Query: 469 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 648
           SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA
Sbjct: 121 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 180

Query: 649 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAAIQRQKYERISEKKMSTPIEVL 828
           SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAA +RQKYERISEKKMSTPIEVL
Sbjct: 181 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 240

Query: 829 XQGYPSEFATYLNFCRSLRFDDKPDYSYLKQLFRNLFHR 945
            +GYPSEFATYLNFCRSLRFDDKPDYSYL+QLFRNLFHR
Sbjct: 241 CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHR 279


>ref|NP_082150.1| casein kinase I isoform delta isoform 2 [Mus musculus].
          Length = 409

 Score =  560 bits (1442), Expect = e-160
 Identities = 273/279 (97%), Positives = 276/279 (98%)
 Frame = +1

Query: 109 MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKFECVKTKHPQLHIESKIYKMMQ 288
           MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIK ECVKTKHPQLHIESKIYKMMQ
Sbjct: 1   MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQ 60

Query: 289 GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 468
           GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH
Sbjct: 61  GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 120

Query: 469 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 648
           SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA
Sbjct: 121 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 180

Query: 649 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAAIQRQKYERISEKKMSTPIEVL 828
           SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAA +RQKYERISEKKMSTPIEVL
Sbjct: 181 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 240

Query: 829 XQGYPSEFATYLNFCRSLRFDDKPDYSYLKQLFRNLFHR 945
            +GYPSEFATYLNFCRSLRFDDKPDYSYL+QLFRNLFHR
Sbjct: 241 CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHR 279


>ref|NP_038795.3| casein kinase I isoform epsilon [Mus musculus].
          Length = 416

 Score =  548 bits (1412), Expect = e-156
 Identities = 265/279 (94%), Positives = 274/279 (98%)
 Frame = +1

Query: 109 MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKFECVKTKHPQLHIESKIYKMMQ 288
           MELRVGN+YRLGRKIGSGSFGDIYLG +IA+GEEVAIK ECVKTKHPQLHIESK YKMMQ
Sbjct: 1   MELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQ 60

Query: 289 GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 468
           GGVGIP+I+WCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH
Sbjct: 61  GGVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 120

Query: 469 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 648
           SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA
Sbjct: 121 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 180

Query: 649 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAAIQRQKYERISEKKMSTPIEVL 828
           SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAA +RQKYERISEKKMSTPIEVL
Sbjct: 181 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 240

Query: 829 XQGYPSEFATYLNFCRSLRFDDKPDYSYLKQLFRNLFHR 945
            +GYPSEF+TYLNFCRSLRFDDKPDYSYL+QLFRNLFHR
Sbjct: 241 CKGYPSEFSTYLNFCRSLRFDDKPDYSYLRQLFRNLFHR 279


>ref|NP_666199.1| casein kinase I isoform alpha [Mus musculus].
          Length = 325

 Score =  440 bits (1132), Expect = e-124
 Identities = 208/276 (75%), Positives = 243/276 (88%)
 Frame = +1

Query: 112 ELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKFECVKTKHPQLHIESKIYKMMQG 291
           E  VG +Y+L RKIGSGSFGDIYL  +I  GEEVA+K E  K +HPQL  ESK+YK++QG
Sbjct: 10  EFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKILQG 69

Query: 292 GVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 471
           GVGIP IRW G E DYNV+VM+LLGPSLEDLFNFCSR+F++KTVL+LADQMISRIEY+H+
Sbjct: 70  GVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYVHT 129

Query: 472 KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYAS 651
           KNFIHRD+KPDNFLMG+G+  N +++IDFGLAKKYRD RT QHIPYRE+KNLTGTARYAS
Sbjct: 130 KNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARYAS 189

Query: 652 INTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAAIQRQKYERISEKKMSTPIEVLX 831
           IN HLGIEQSRRDD+ESLGYVLMYFN  SLPWQGLKAA ++QKYE+ISEKKMSTP+EVL 
Sbjct: 190 INAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATKKQKYEKISEKKMSTPVEVLC 249

Query: 832 QGYPSEFATYLNFCRSLRFDDKPDYSYLKQLFRNLF 939
           +G+P+EFA YLN+CR LRF++ PDY YL+QLFR LF
Sbjct: 250 KGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILF 285


>ref|NP_690022.2| casein kinase I isoform gamma-3 [Mus musculus].
          Length = 424

 Score =  338 bits (868), Expect = 3e-93
 Identities = 164/279 (58%), Positives = 214/279 (76%), Gaps = 2/279 (0%)
 Frame = +1

Query: 115 LRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKFECVKTKHPQLHIESKIYKMMQGG 294
           L VG  +R+G+KIG G+FG++ LG ++   E VAIK E +K++ PQLH+E + YK +  G
Sbjct: 37  LMVGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSG 96

Query: 295 VGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK 474
            GIP + + G  G YN MV+ELLGPSLEDLF+ C R FSLKTVL++A Q+ISR+EY+HSK
Sbjct: 97  DGIPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSK 156

Query: 475 NFIHRDVKPDNFLMGL--GKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 648
           N I+RDVKP+NFL+G    K   +++IIDFGLAK+Y D  T +HIPYRE+K+LTGTARY 
Sbjct: 157 NLIYRDVKPENFLIGRPGNKAQQVIHIIDFGLAKEYIDPETKKHIPYREHKSLTGTARYM 216

Query: 649 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAAIQRQKYERISEKKMSTPIEVL 828
           SINTHLG EQSRRDDLE+LG++ MYF  GSLPWQGLKA   +++Y++I + K +TPIEVL
Sbjct: 217 SINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVL 276

Query: 829 XQGYPSEFATYLNFCRSLRFDDKPDYSYLKQLFRNLFHR 945
            + +P E ATYL + R L F +KPDY YL++LF +LF R
Sbjct: 277 CENFPEEMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDR 315


>ref|NP_775277.2| casein kinase I isoform gamma-1 [Mus musculus].
          Length = 459

 Score =  335 bits (859), Expect = 3e-92
 Identities = 162/289 (56%), Positives = 219/289 (75%), Gaps = 3/289 (1%)
 Frame = +1

Query: 88  TGLAEAAMELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKFECVKTKHPQLHIES 267
           +G + ++  L VG  +R+G+KIG G+FG++ LG ++   E VAIK E +K++ PQLH+E 
Sbjct: 29  SGTSTSSGVLMVGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPIKSRAPQLHLEY 88

Query: 268 KIYKMM-QGGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQM 444
           + YK +   G G+P + + G  G YN MV+ELLGPSLEDLF+ C R F+LKTVL++A Q+
Sbjct: 89  RFYKQLGSAGEGLPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFTLKTVLMIAIQL 148

Query: 445 ISRIEYIHSKNFIHRDVKPDNFLMGL--GKKGNLVYIIDFGLAKKYRDARTHQHIPYREN 618
           +SR+EY+HSKN I+RDVKP+NFL+G    KK ++++IIDFGLAK+Y D  T +HIPYRE+
Sbjct: 149 LSRMEYVHSKNLIYRDVKPENFLIGRQGNKKEHVIHIIDFGLAKEYVDPETKKHIPYREH 208

Query: 619 KNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAAIQRQKYERISE 798
           K+LTGTARY SINTHLG EQSRRDDLE+LG++ MYF  GSLPWQGLKA   +++Y++I +
Sbjct: 209 KSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGD 268

Query: 799 KKMSTPIEVLXQGYPSEFATYLNFCRSLRFDDKPDYSYLKQLFRNLFHR 945
            K +TPIE L + +P E ATYL + R L F +KPDY YL+ LF +LF R
Sbjct: 269 TKRNTPIEALCENFPEEMATYLRYVRRLDFFEKPDYEYLRTLFTDLFER 317


>ref|NP_001153063.1| casein kinase I isoform gamma-2 isoform 2 [Mus musculus].
          Length = 415

 Score =  332 bits (852), Expect = 2e-91
 Identities = 165/310 (53%), Positives = 225/310 (72%), Gaps = 6/310 (1%)
 Frame = +1

Query: 34  KGDLGPGDP-SPSAAGRGRTGLAEAAME---LRVGNRYRLGRKIGSGSFGDIYLGTDIAA 201
           KG+L  G   S +   R   G+  +      L VG  +R+G+KIG G+FG++ LG ++  
Sbjct: 9   KGELEEGRRMSKTGTSRSNHGVRSSGTSSGVLMVGPNFRVGKKIGCGNFGELRLGKNLYT 68

Query: 202 GEEVAIKFECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELLGPSLED 381
            E VAIK E +K++ PQLH+E + YK +    G+P + + G  G YN MV+ELLGPSLED
Sbjct: 69  NEYVAIKLEPIKSRAPQLHLEYRFYKQLSTTEGVPQVYYFGPCGKYNAMVLELLGPSLED 128

Query: 382 LFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGL--GKKGNLVYIID 555
           LF+ C R F+LKTVL++A Q+I+R+EY+H+K+ I+RDVKP+NFL+G    K+ + ++IID
Sbjct: 129 LFDLCDRTFTLKTVLMIAIQLITRMEYVHTKSLIYRDVKPENFLVGRPGSKRQHSIHIID 188

Query: 556 FGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLG 735
           FGLAK+Y D  T +HIPYRE+K+LTGTARY SINTHLG EQSRRDDLE+LG++ MYF  G
Sbjct: 189 FGLAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRG 248

Query: 736 SLPWQGLKAAIQRQKYERISEKKMSTPIEVLXQGYPSEFATYLNFCRSLRFDDKPDYSYL 915
           SLPWQGLKA   +++Y++I + K +TPIEVL + +P E ATYL + R L F +KPDY YL
Sbjct: 249 SLPWQGLKADTLKERYQKIGDTKRATPIEVLCESFPEEMATYLRYVRRLDFFEKPDYDYL 308

Query: 916 KQLFRNLFHR 945
           ++LF +LF R
Sbjct: 309 RKLFTDLFDR 318


>ref|NP_598763.1| casein kinase I isoform gamma-2 isoform 1 [Mus musculus].
          Length = 442

 Score =  318 bits (816), Expect = 3e-87
 Identities = 165/337 (48%), Positives = 225/337 (66%), Gaps = 33/337 (9%)
 Frame = +1

Query: 34   KGDLGPGDP-SPSAAGRGRTGLAEAAME---LRVGNRYRLGRKIGSGSFGDIYLGTDIAA 201
            KG+L  G   S +   R   G+  +      L VG  +R+G+KIG G+FG++ LG ++  
Sbjct: 9    KGELEEGRRMSKTGTSRSNHGVRSSGTSSGVLMVGPNFRVGKKIGCGNFGELRLGKNLYT 68

Query: 202  GEEVAIKFECVKTKHPQLHIESKIYKMMQG---------------------------GVG 300
             E VAIK E +K++ PQLH+E + YK +                               G
Sbjct: 69   NEYVAIKLEPIKSRAPQLHLEYRFYKQLSTTGEADSGTGPALLGQQWLRTPSMDVSFAEG 128

Query: 301  IPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNF 480
            +P + + G  G YN MV+ELLGPSLEDLF+ C R F+LKTVL++A Q+I+R+EY+H+K+ 
Sbjct: 129  VPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFTLKTVLMIAIQLITRMEYVHTKSL 188

Query: 481  IHRDVKPDNFLMGL--GKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASI 654
            I+RDVKP+NFL+G    K+ + ++IIDFGLAK+Y D  T +HIPYRE+K+LTGTARY SI
Sbjct: 189  IYRDVKPENFLVGRPGSKRQHSIHIIDFGLAKEYIDPETKKHIPYREHKSLTGTARYMSI 248

Query: 655  NTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAAIQRQKYERISEKKMSTPIEVLXQ 834
            NTHLG EQSRRDDLE+LG++ MYF  GSLPWQGLKA   +++Y++I + K +TPIEVL +
Sbjct: 249  NTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVLCE 308

Query: 835  GYPSEFATYLNFCRSLRFDDKPDYSYLKQLFRNLFHR 945
             +P E ATYL + R L F +KPDY YL++LF +LF R
Sbjct: 309  SFPEEMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDR 345


>ref|NP_001156336.1| tau-tubulin kinase 1 [Mus musculus].
          Length = 1308

 Score =  169 bits (427), Expect = 4e-42
 Identities = 105/277 (37%), Positives = 147/277 (53%), Gaps = 6/277 (2%)
 Frame = +1

Query: 121 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKFECVKTKHPQLHIESKIYKMMQGGVG 300
           V +R+++ +KIG G FG+IY   D+   E VA+K E  +     L +E  + K +QG   
Sbjct: 30  VKDRWKVLKKIGGGGFGEIYEAMDLLTRENVALKVESAQQPKQVLKMEVAVLKKLQGKDH 89

Query: 301 IPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSR-KFSLKTVLLLADQMISRIEYIHSKN 477
           +     CG    +N +VM+L G +L DL     R  F+L T L L  Q++  IE IHS  
Sbjct: 90  VCRFIGCGRNEKFNYVVMQLQGRNLADLRRSQPRGTFTLSTTLRLGKQILESIEAIHSVG 149

Query: 478 FIHRDVKPDNFLMG-LGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASI 654
           F+HRD+KP NF MG L       Y++DFGLA++Y +  T    P R      GT RYAS+
Sbjct: 150 FLHRDIKPSNFAMGRLPSTYRKCYMLDFGLARQYTNT-TGDVRPPRNVAGFRGTVRYASV 208

Query: 655 NTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAAIQ----RQKYERISEKKMSTPIE 822
           N H   E  R DDL SL Y+L+ F +G LPW+ +K   Q    ++KYE            
Sbjct: 209 NAHKNREMGRHDDLWSLFYMLVEFAVGQLPWRKIKDKEQVGMIKEKYEH----------R 258

Query: 823 VLXQGYPSEFATYLNFCRSLRFDDKPDYSYLKQLFRN 933
           +L +  PSEF  +L+   SL +  KPDY  +  +F N
Sbjct: 259 MLLKHMPSEFHLFLDHIASLDYFTKPDYQLIMSVFEN 295


>ref|NP_001020028.1| tau-tubulin kinase 2 isoform 2 [Mus musculus].
          Length = 1243

 Score =  163 bits (413), Expect = 2e-40
 Identities = 101/273 (36%), Positives = 145/273 (53%), Gaps = 2/273 (0%)
 Frame = +1

Query: 121 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKFECVKTKHPQLHIESKIYKMMQGGVG 300
           V  R+++ RKIG G FG+IY   D+   E VA+K E  +     L +E  + K +QG   
Sbjct: 17  VKERWKVLRKIGGGGFGEIYDALDMLTRENVALKVESAQQPKQVLKMEVAVLKKLQGKDH 76

Query: 301 IPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSR-KFSLKTVLLLADQMISRIEYIHSKN 477
           +     CG    +N +VM+L G +L DL    SR  F++ T L L  Q++  IE IHS  
Sbjct: 77  VCRFIGCGRNDRFNYVVMQLQGRNLADLRRSQSRGTFTISTTLRLGKQILESIESIHSVG 136

Query: 478 FIHRDVKPDNFLMG-LGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASI 654
           F+HRD+KP NF MG         +++DFGLA+++ ++      P R      GT RYASI
Sbjct: 137 FLHRDIKPSNFAMGRFPSTCRKCFMLDFGLARQFTNSCGDVR-PPRAVAGFRGTVRYASI 195

Query: 655 NTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAAIQRQKYERISEKKMSTPIEVLXQ 834
           N H   E  R DDL SL Y+L+ F +G LPW+ +K        E++   K      ++ +
Sbjct: 196 NAHRNREMGRHDDLWSLFYMLVEFVVGQLPWRKIK------DKEQVGSIKERYDHRLMLK 249

Query: 835 GYPSEFATYLNFCRSLRFDDKPDYSYLKQLFRN 933
             P EF+T+L+   SL +  KPDY  L  +F N
Sbjct: 250 HLPPEFSTFLDHISSLDYFTKPDYQLLTSVFDN 282


  Database: RefSeq49_MP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 15,617,559
  Number of sequences in database:  30,036
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 26,814,699
Number of extensions: 682830
Number of successful extensions: 4581
Number of sequences better than 1.0e-05: 247
Number of HSP's gapped: 4198
Number of HSP's successfully gapped: 249
Length of query: 315
Length of database: 15,617,559
Length adjustment: 101
Effective length of query: 214
Effective length of database: 12,583,923
Effective search space: 2692959522
Effective search space used: 2692959522
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-001109
         (945 letters)

Database: RefSeq49_SP.fasta 
           24,897 sequences; 11,343,932 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_003355386.1| PREDICTED: casein kinase I isoform epsilon i...   548   e-156
Alignment   gi|XP_003126072.1| PREDICTED: casein kinase I isoform epsilon i...   548   e-156
Alignment   gi|XP_003124136.1| PREDICTED: casein kinase I isoform alpha iso...   440   e-124
Alignment   gi|XP_003357975.1| PREDICTED: hypothetical protein LOC100625051...   426   e-120
Alignment   gi|XP_003354399.1| PREDICTED: casein kinase I isoform alpha [Su...   425   e-119
Alignment   gi|XP_003123049.1| PREDICTED: casein kinase I isoform gamma-2 [...   313   1e-85
Alignment   gi|XP_001927058.3| PREDICTED: casein kinase I isoform gamma-1-l...   280   1e-75
Alignment   gi|XP_003123926.2| PREDICTED: casein kinase I isoform gamma-3-l...   268   4e-72
Alignment   gi|XP_001929339.2| PREDICTED: tau-tubulin kinase 1 [Sus scrofa].     169   3e-42
Alignment   gi|XP_003353431.1| PREDICTED: tau-tubulin kinase 2 [Sus scrofa].     162   3e-40

>ref|XP_003355386.1| PREDICTED: casein kinase I isoform epsilon isoform 2 [Sus scrofa].
          Length = 416

 Score =  548 bits (1412), Expect = e-156
 Identities = 265/279 (94%), Positives = 274/279 (98%)
 Frame = +1

Query: 109 MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKFECVKTKHPQLHIESKIYKMMQ 288
           MELRVGN+YRLGRKIGSGSFGDIYLG +IA+GEEVAIK ECVKTKHPQLHIESK YKMMQ
Sbjct: 1   MELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQ 60

Query: 289 GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 468
           GGVGIP+I+WCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH
Sbjct: 61  GGVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 120

Query: 469 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 648
           SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA
Sbjct: 121 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 180

Query: 649 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAAIQRQKYERISEKKMSTPIEVL 828
           SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAA +RQKYERISEKKMSTPIEVL
Sbjct: 181 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 240

Query: 829 XQGYPSEFATYLNFCRSLRFDDKPDYSYLKQLFRNLFHR 945
            +GYPSEF+TYLNFCRSLRFDDKPDYSYL+QLFRNLFHR
Sbjct: 241 CKGYPSEFSTYLNFCRSLRFDDKPDYSYLRQLFRNLFHR 279


>ref|XP_003126072.1| PREDICTED: casein kinase I isoform epsilon isoform 1 [Sus scrofa].
          Length = 416

 Score =  548 bits (1412), Expect = e-156
 Identities = 265/279 (94%), Positives = 274/279 (98%)
 Frame = +1

Query: 109 MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKFECVKTKHPQLHIESKIYKMMQ 288
           MELRVGN+YRLGRKIGSGSFGDIYLG +IA+GEEVAIK ECVKTKHPQLHIESK YKMMQ
Sbjct: 1   MELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQ 60

Query: 289 GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 468
           GGVGIP+I+WCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH
Sbjct: 61  GGVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 120

Query: 469 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 648
           SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA
Sbjct: 121 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 180

Query: 649 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAAIQRQKYERISEKKMSTPIEVL 828
           SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAA +RQKYERISEKKMSTPIEVL
Sbjct: 181 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 240

Query: 829 XQGYPSEFATYLNFCRSLRFDDKPDYSYLKQLFRNLFHR 945
            +GYPSEF+TYLNFCRSLRFDDKPDYSYL+QLFRNLFHR
Sbjct: 241 CKGYPSEFSTYLNFCRSLRFDDKPDYSYLRQLFRNLFHR 279


>ref|XP_003124136.1| PREDICTED: casein kinase I isoform alpha isoform 1 [Sus scrofa].
          Length = 337

 Score =  440 bits (1132), Expect = e-124
 Identities = 208/276 (75%), Positives = 243/276 (88%)
 Frame = +1

Query: 112 ELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKFECVKTKHPQLHIESKIYKMMQG 291
           E  VG +Y+L RKIGSGSFGDIYL  +I  GEEVA+K E  K +HPQL  ESK+YK++QG
Sbjct: 10  EFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKILQG 69

Query: 292 GVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 471
           GVGIP IRW G E DYNV+VM+LLGPSLEDLFNFCSR+F++KTVL+LADQMISRIEY+H+
Sbjct: 70  GVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYVHT 129

Query: 472 KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYAS 651
           KNFIHRD+KPDNFLMG+G+  N +++IDFGLAKKYRD RT QHIPYRE+KNLTGTARYAS
Sbjct: 130 KNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARYAS 189

Query: 652 INTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAAIQRQKYERISEKKMSTPIEVLX 831
           IN HLGIEQSRRDD+ESLGYVLMYFN  SLPWQGLKAA ++QKYE+ISEKKMSTP+EVL 
Sbjct: 190 INAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATKKQKYEKISEKKMSTPVEVLC 249

Query: 832 QGYPSEFATYLNFCRSLRFDDKPDYSYLKQLFRNLF 939
           +G+P+EFA YLN+CR LRF++ PDY YL+QLFR LF
Sbjct: 250 KGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILF 285


>ref|XP_003357975.1| PREDICTED: hypothetical protein LOC100625051 [Sus scrofa].
          Length = 620

 Score =  426 bits (1095), Expect = e-120
 Identities = 209/217 (96%), Positives = 213/217 (98%)
 Frame = +1

Query: 295 VGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK 474
           VGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK
Sbjct: 36  VGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK 95

Query: 475 NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASI 654
           NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASI
Sbjct: 96  NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASI 155

Query: 655 NTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAAIQRQKYERISEKKMSTPIEVLXQ 834
           NTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAA +RQKYERISEK+MSTPIEVL +
Sbjct: 156 NTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKEMSTPIEVLCK 215

Query: 835 GYPSEFATYLNFCRSLRFDDKPDYSYLKQLFRNLFHR 945
             PSEFATYLNFCRSLRFDDKPDYSYL+QLFRNLFHR
Sbjct: 216 -LPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHR 251


>ref|XP_003354399.1| PREDICTED: casein kinase I isoform alpha [Sus scrofa].
          Length = 364

 Score =  425 bits (1093), Expect = e-119
 Identities = 208/304 (68%), Positives = 243/304 (79%), Gaps = 28/304 (9%)
 Frame = +1

Query: 112 ELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKFECVKTKHPQLHIESKIYKMMQG 291
           E  VG +Y+L RKIGSGSFGDIYL  +I  GEEVA+K E  K +HPQL  ESK+YK++QG
Sbjct: 10  EFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKILQG 69

Query: 292 GVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 471
           GVGIP IRW G E DYNV+VM+LLGPSLEDLFNFCSR+F++KTVL+LADQMISRIEY+H+
Sbjct: 70  GVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYVHT 129

Query: 472 KNFIHRDVKPDNFLMGLGKKGNL----------------------------VYIIDFGLA 567
           KNFIHRD+KPDNFLMG+G+  N                             +++IDFGLA
Sbjct: 130 KNFIHRDIKPDNFLMGIGRHCNKCLESPVGKRKRSMTVSTSQDPSFSGLNQLFLIDFGLA 189

Query: 568 KKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPW 747
           KKYRD RT QHIPYRE+KNLTGTARYASIN HLGIEQSRRDD+ESLGYVLMYFN  SLPW
Sbjct: 190 KKYRDNRTRQHIPYREDKNLTGTARYASINAHLGIEQSRRDDMESLGYVLMYFNRTSLPW 249

Query: 748 QGLKAAIQRQKYERISEKKMSTPIEVLXQGYPSEFATYLNFCRSLRFDDKPDYSYLKQLF 927
           QGLKAA ++QKYE+ISEKKMSTP+EVL +G+P+EFA YLN+CR LRF++ PDY YL+QLF
Sbjct: 250 QGLKAATKKQKYEKISEKKMSTPVEVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLF 309

Query: 928 RNLF 939
           R LF
Sbjct: 310 RILF 313


>ref|XP_003123049.1| PREDICTED: casein kinase I isoform gamma-2 [Sus scrofa].
          Length = 409

 Score =  313 bits (801), Expect = 1e-85
 Identities = 156/309 (50%), Positives = 216/309 (69%), Gaps = 5/309 (1%)
 Frame = +1

Query: 34  KGDLGPGDPSPSAAGRGRTGLAEAAME---LRVGNRYRLGRKIGSGSFGDIYLGTDIAAG 204
           KG+   G     A GR   G+  +      L VG  +R+G+KIG G+FG++ LG ++   
Sbjct: 9   KGESEEGRRMSKAGGRTSHGVRSSGTSSGVLMVGPNFRVGKKIGCGNFGELRLGKNLYTN 68

Query: 205 EEVAIKFECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELLGPSLEDL 384
           E VAIK E +K++ PQLH+E + YK +    G+P + + G  G YN MV+ELLGPSLEDL
Sbjct: 69  EYVAIKLEPIKSRAPQLHLEYRFYKQLSAAEGVPQVYYFGPCGKYNAMVLELLGPSLEDL 128

Query: 385 FNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGL--GKKGNLVYIIDF 558
           F+ C R F+LKTVL++A Q+I+R+EY+H+K+ I+RDVKP+NFL+G    K+ + ++IIDF
Sbjct: 129 FDLCDRTFTLKTVLMIAIQLITRMEYVHTKSLIYRDVKPENFLVGRPGTKRQHAIHIIDF 188

Query: 559 GLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGS 738
           GLAK+Y D  T +HIPYRE+K+LTGTARY SINTHLG     + +L + G + MYF  GS
Sbjct: 189 GLAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLG-----KGELHAXGPMFMYFLRGS 243

Query: 739 LPWQGLKAAIQRQKYERISEKKMSTPIEVLXQGYPSEFATYLNFCRSLRFDDKPDYSYLK 918
           LPWQGLKA   +++Y++I + K +TPIEVL + +P E ATYL + R L F +KPDY YL+
Sbjct: 244 LPWQGLKADTLKERYQKIGDTKRATPIEVLCESFPEEMATYLRYVRRLDFFEKPDYDYLR 303

Query: 919 QLFRNLFHR 945
           +LF +LF R
Sbjct: 304 KLFTDLFDR 312


>ref|XP_001927058.3| PREDICTED: casein kinase I isoform gamma-1-like [Sus scrofa].
          Length = 494

 Score =  280 bits (715), Expect = 1e-75
 Identities = 133/218 (61%), Positives = 172/218 (78%), Gaps = 2/218 (0%)
 Frame = +1

Query: 298 GIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKN 477
           G+P + + G  G YN MV+ELLGPSLEDLF+ C R F+LKTVL++A Q++SR+EY+HSKN
Sbjct: 128 GLPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFTLKTVLMIAIQLLSRMEYVHSKN 187

Query: 478 FIHRDVKPDNFLMGL--GKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYAS 651
            I+RDVKP+NFL+G    KK ++++IIDFGLAK+Y D  T +HIPYRE+K+LTGTARY S
Sbjct: 188 LIYRDVKPENFLIGRQGNKKEHVIHIIDFGLAKEYIDPETKKHIPYREHKSLTGTARYMS 247

Query: 652 INTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAAIQRQKYERISEKKMSTPIEVLX 831
           INTHLG EQSRRDDLE+LG++ MYF  GSLPWQGLKA   +++Y++I + K +TPIE L 
Sbjct: 248 INTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRNTPIEALC 307

Query: 832 QGYPSEFATYLNFCRSLRFDDKPDYSYLKQLFRNLFHR 945
           + +P E ATYL + R L F +KPDY YL+ LF +LF R
Sbjct: 308 ENFPEEMATYLRYVRRLDFFEKPDYEYLRTLFTDLFER 345


>ref|XP_003123926.2| PREDICTED: casein kinase I isoform gamma-3-like [Sus scrofa].
          Length = 311

 Score =  268 bits (684), Expect = 4e-72
 Identities = 129/202 (63%), Positives = 163/202 (80%), Gaps = 2/202 (0%)
 Frame = +1

Query: 346 MVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGL- 522
           MV+ELLGPSLEDLF+ C R FSLKTVL++A Q+ISR+EY+HSKN I+RDVKP+NFL+G  
Sbjct: 1   MVLELLGPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRP 60

Query: 523 -GKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLE 699
             K   +++IIDFGLAK+Y D  T +HIPYRE+K+LTGTARY SINTHLG EQSRRDDLE
Sbjct: 61  GNKTQQVIHIIDFGLAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLE 120

Query: 700 SLGYVLMYFNLGSLPWQGLKAAIQRQKYERISEKKMSTPIEVLXQGYPSEFATYLNFCRS 879
           +LG++ MYF  GSLPWQGLKA   +++Y++I + K +TPIEVL + +P E ATYL + R 
Sbjct: 121 ALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVLCENFPEEMATYLRYVRR 180

Query: 880 LRFDDKPDYSYLKQLFRNLFHR 945
           L F +KPDY YL++LF +LF R
Sbjct: 181 LDFFEKPDYDYLRKLFTDLFDR 202


>ref|XP_001929339.2| PREDICTED: tau-tubulin kinase 1 [Sus scrofa].
          Length = 1305

 Score =  169 bits (427), Expect = 3e-42
 Identities = 105/277 (37%), Positives = 147/277 (53%), Gaps = 6/277 (2%)
 Frame = +1

Query: 121 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKFECVKTKHPQLHIESKIYKMMQGGVG 300
           V +R+++ +KIG G FG+IY   D+   E VA+K E  +     L +E  + K +QG   
Sbjct: 30  VKDRWKVLKKIGGGGFGEIYEAMDLLTRENVALKVESAQQPKQVLKMEVAVLKKLQGKDH 89

Query: 301 IPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSR-KFSLKTVLLLADQMISRIEYIHSKN 477
           +     CG    +N +VM+L G +L DL     R  F+L T L L  Q++  IE IHS  
Sbjct: 90  VCRFIGCGRNEKFNYVVMQLQGRNLADLRRSQPRGTFTLSTTLRLGKQILESIEAIHSVG 149

Query: 478 FIHRDVKPDNFLMG-LGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASI 654
           F+HRD+KP NF MG L       Y++DFGLA++Y +  T    P R      GT RYAS+
Sbjct: 150 FLHRDIKPSNFAMGRLPSTYRKCYMLDFGLARQYTNT-TGDVRPPRNVAGFRGTVRYASV 208

Query: 655 NTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAAIQ----RQKYERISEKKMSTPIE 822
           N H   E  R DDL SL Y+L+ F +G LPW+ +K   Q    ++KYE            
Sbjct: 209 NAHKNREMGRHDDLWSLFYMLVEFAVGQLPWRKIKDKEQVGMIKEKYEH----------R 258

Query: 823 VLXQGYPSEFATYLNFCRSLRFDDKPDYSYLKQLFRN 933
           +L +  PSEF  +L+   SL +  KPDY  +  +F N
Sbjct: 259 MLLKHMPSEFHLFLDHIASLDYFTKPDYQLIMSVFEN 295


>ref|XP_003353431.1| PREDICTED: tau-tubulin kinase 2 [Sus scrofa].
          Length = 1243

 Score =  162 bits (410), Expect = 3e-40
 Identities = 101/273 (36%), Positives = 144/273 (52%), Gaps = 2/273 (0%)
 Frame = +1

Query: 121 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKFECVKTKHPQLHIESKIYKMMQGGVG 300
           V  R+++ RKIG G FG+IY   D+   E VA+K E  +     L +E  + K +QG   
Sbjct: 17  VKERWKVLRKIGGGGFGEIYDALDMLTRENVALKVESAQQPKQVLKMEVAVLKKLQGKDH 76

Query: 301 IPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSR-KFSLKTVLLLADQMISRIEYIHSKN 477
           +     CG    +N +VM+L G +L DL    SR  F++ T L L  Q++  IE IHS  
Sbjct: 77  VCRFIGCGRNDRFNYVVMQLQGRNLADLRRSQSRGTFTISTTLRLGRQILESIESIHSVG 136

Query: 478 FIHRDVKPDNFLMG-LGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASI 654
           F+HRD+KP NF MG         Y++DFGLA+++ ++      P R      GT RYASI
Sbjct: 137 FLHRDIKPSNFAMGRFPSTCRKCYMLDFGLARQFTNSCGDVR-PPRAVAGFRGTVRYASI 195

Query: 655 NTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAAIQRQKYERISEKKMSTPIEVLXQ 834
           N H   E  R DDL SL Y+L+ F +G LPW+ +K        E++   K      ++ +
Sbjct: 196 NAHRNREMGRHDDLWSLFYMLVEFVVGQLPWRKIK------DKEQVGSIKERYDHRLMLK 249

Query: 835 GYPSEFATYLNFCRSLRFDDKPDYSYLKQLFRN 933
             P EF+ +L+   SL +  KPDY  L  +F N
Sbjct: 250 HLPPEFSIFLDHISSLDYFTKPDYQLLTSVFDN 282


  Database: RefSeq49_SP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 11,343,932
  Number of sequences in database:  24,897
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 20,202,736
Number of extensions: 529767
Number of successful extensions: 3599
Number of sequences better than 1.0e-05: 131
Number of HSP's gapped: 3399
Number of HSP's successfully gapped: 131
Length of query: 315
Length of database: 11,343,932
Length adjustment: 99
Effective length of query: 216
Effective length of database: 8,879,129
Effective search space: 1917891864
Effective search space used: 1917891864
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 33 (17.3 bits)

BLASTN 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-001109
         (945 letters)

Database: Sscrofa_10.2.fasta 
           4582 sequences; 2,808,509,378 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Sscrofa_Chr12                                                         456   e-125
Sscrofa_Chr05                                                         345   3e-92
Sscrofa_Chr02                                                          64   1e-07

>Sscrofa_Chr12 
||          Length = 63588571

 Score =  456 bits (230), Expect = e-125
 Identities = 230/230 (100%)
 Strand = Plus / Minus

                                                                          
Query: 444    gatcagccgcatcgagtacatccactcgaagaacttcatccaccgggacgtgaagccgga 503
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 977279 gatcagccgcatcgagtacatccactcgaagaacttcatccaccgggacgtgaagccgga 977220

                                                                          
Query: 504    caacttcctcatggggctgggcaagaagggcaacctggtgtacatcatcgacttcgggct 563
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 977219 caacttcctcatggggctgggcaagaagggcaacctggtgtacatcatcgacttcgggct 977160

                                                                          
Query: 564    ggccaagaagtaccgggacgcccgcacccaccagcacatcccctaccgcgagaacaagaa 623
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 977159 ggccaagaagtaccgggacgcccgcacccaccagcacatcccctaccgcgagaacaagaa 977100

                                                                
Query: 624    cctcaccggcaccgcgcgctacgcctccatcaacacgcacctcggcatcg 673
              ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 977099 cctcaccggcaccgcgcgctacgcctccatcaacacgcacctcggcatcg 977050



 Score =  299 bits (151), Expect = 1e-78
 Identities = 151/151 (100%)
 Strand = Plus / Minus

                                                                          
Query: 294    agtgggcatccccaccatccggtggtgtggggccgagggcgactacaacgtcatggtcat 353
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 977841 agtgggcatccccaccatccggtggtgtggggccgagggcgactacaacgtcatggtcat 977782

                                                                          
Query: 354    ggagctgctggggcccagcctggaggacctcttcaacttctgctccaggaagttcagcct 413
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 977781 ggagctgctggggcccagcctggaggacctcttcaacttctgctccaggaagttcagcct 977722

                                             
Query: 414    caagaccgtcctgctgctcgctgaccagatg 444
              |||||||||||||||||||||||||||||||
Sbjct: 977721 caagaccgtcctgctgctcgctgaccagatg 977691



 Score =  289 bits (146), Expect = 1e-75
 Identities = 155/158 (98%)
 Strand = Plus / Minus

                                                                          
Query: 673    gaacaatctcggagggacgacctggaatctctgggctacgtgctcatgtacttcaacctg 732
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 976864 gaacaatctcggagggacgacctggaatctctgggctacgtgctcatgtacttcaacctg 976805

                                                                          
Query: 733    ggctcgctgccctggcagggcctgaaggcggccatccagcgccagaagtacgagcgcatc 792
              |||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||
Sbjct: 976804 ggctcgctgccctggcagggcctgaaggcggccaccaagcgccagaagtacgagcgcatc 976745

                                                    
Query: 793    agcgagaagaagatgtccacgcccatcgaggtgctctg 830
              ||||||||| ||||||||||||||||||||||||||||
Sbjct: 976744 agcgagaaggagatgtccacgcccatcgaggtgctctg 976707



 Score =  214 bits (108), Expect = 7e-53
 Identities = 111/112 (99%)
 Strand = Plus / Plus

                                                                          
Query: 184    ggtacggacattgctgcgggagaagaagttgccatcaagtttgaatgtgtcaaaactaag 243
              ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 894955 ggtacggacattgctgcgggagaagaagttgccatcaagcttgaatgtgtcaaaactaag 895014

                                                                  
Query: 244    caccctcagctccacatcgagagcaaaatctacaagatgatgcagggaggag 295
              ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 895015 caccctcagctccacatcgagagcaaaatctacaagatgatgcagggaggag 895066



 Score =  210 bits (106), Expect = 1e-51
 Identities = 106/106 (100%)
 Strand = Plus / Plus

                                                                          
Query: 1      cagcgcgatggcggcggctccttcaggcccctgaagggggatttaggcccgggagatccg 60
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 887680 cagcgcgatggcggcggctccttcaggcccctgaagggggatttaggcccgggagatccg 887739

                                                            
Query: 61     agtccatccgcggcggggagagggcgaacggggttggcggaggccg 106
              ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 887740 agtccatccgcggcggggagagggcgaacggggttggcggaggccg 887785



 Score =  176 bits (89), Expect = 1e-41
 Identities = 98/101 (97%)
 Strand = Plus / Minus

                                                                          
Query: 845    ccgagttcgccacgtacctgaacttctgccgttccctgcgctttgatgacaagcctgact 904
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 976099 ccgagttcgccacgtacctgaacttctgccgttccctgcgctttgatgacaagcctgact 976040

                                                       
Query: 905    actcctacctgaagcagctcttccggaacctgttccaccgc 945
              |||| ||||||| |||||||||| |||||||||||||||||
Sbjct: 976039 actcgtacctgaggcagctcttcaggaacctgttccaccgc 975999


>Sscrofa_Chr05 
||          Length = 111506441

 Score =  345 bits (174), Expect = 3e-92
 Identities = 216/230 (93%)
 Strand = Plus / Plus

                                                                           
Query: 444     gatcagccgcatcgagtacatccactcgaagaacttcatccaccgggacgtgaagccgga 503
               ||||||||||||||||||||||||||| ||||||||||||||||||||||| || || ||
Sbjct: 6893186 gatcagccgcatcgagtacatccactccaagaacttcatccaccgggacgtcaaacccga 6893245

                                                                           
Query: 504     caacttcctcatggggctgggcaagaagggcaacctggtgtacatcatcgacttcgggct 563
               ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 6893246 caacttcctcatgggactggggaagaagggcaacctggtgtacatcatcgacttcgggct 6893305

                                                                           
Query: 564     ggccaagaagtaccgggacgcccgcacccaccagcacatcccctaccgcgagaacaagaa 623
               |||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct: 6893306 ggccaagaagtaccgggacgcccgcacccaccagcacatcccctaccgggaaaacaagaa 6893365

                                                                 
Query: 624     cctcaccggcaccgcgcgctacgcctccatcaacacgcacctcggcatcg 673
               | | |||||||| || |||||||||||||||||||| ||||| |||||||
Sbjct: 6893366 cttgaccggcacggcccgctacgcctccatcaacacccacctgggcatcg 6893415



 Score =  206 bits (104), Expect = 2e-50
 Identities = 133/143 (93%)
 Strand = Plus / Plus

                                                                           
Query: 702     tctgggctacgtgctcatgtacttcaacctgggctcgctgccctggcagggcctgaaggc 761
               |||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||||
Sbjct: 6894076 tctgggttacgtgctcatgtacttcaacctgggctccctgccctggcagggcctcaaggc 6894135

                                                                           
Query: 762     ggccatccagcgccagaagtacgagcgcatcagcgagaagaagatgtccacgcccatcga 821
               ||||| | ||||||||||||| |||||||||||||||||||||||||| |||||||||||
Sbjct: 6894136 ggccaccaagcgccagaagtatgagcgcatcagcgagaagaagatgtcgacgcccatcga 6894195

                                      
Query: 822     ggtgctctgncaaggctacccct 844
               ||| |||||  ||||||||||||
Sbjct: 6894196 ggtcctctgcaaaggctacccct 6894218



 Score =  157 bits (79), Expect = 1e-35
 Identities = 133/151 (88%)
 Strand = Plus / Plus

                                                                           
Query: 294     agtgggcatccccaccatccggtggtgtggggccgagggcgactacaacgtcatggtcat 353
               |||||| |||||  |||||  |||||| ||||||||||| ||||||||||| ||||||||
Sbjct: 6890394 agtgggaatcccgtccatcaagtggtgcggggccgagggtgactacaacgtgatggtcat 6890453

                                                                           
Query: 354     ggagctgctggggcccagcctggaggacctcttcaacttctgctccaggaagttcagcct 413
               |||| |||||||||||||||| |||||||||||||||||||||||| | ||||| |||||
Sbjct: 6890454 ggagttgctggggcccagcctcgaggacctcttcaacttctgctcccgaaagtttagcct 6890513

                                              
Query: 414     caagaccgtcctgctgctcgctgaccagatg 444
               |||||| || ||||| || || |||||||||
Sbjct: 6890514 caagacggtgctgctcctggcggaccagatg 6890544



 Score = 99.6 bits (50), Expect = 3e-18
 Identities = 77/86 (89%)
 Strand = Plus / Plus

                                                                           
Query: 859     tacctgaacttctgccgttccctgcgctttgatgacaagcctgactactcctacctgaag 918
               ||||| |||||||||||||| ||||| || |||||||||||||||||||||||||||   
Sbjct: 6895569 tacctcaacttctgccgttcactgcggttcgatgacaagcctgactactcctacctgcgc 6895628

                                         
Query: 919     cagctcttccggaacctgttccaccg 944
               ||||||||||| ||||| ||||||||
Sbjct: 6895629 cagctcttccgcaacctcttccaccg 6895654



 Score = 85.7 bits (43), Expect = 4e-14
 Identities = 79/91 (86%)
 Strand = Plus / Plus

                                                                           
Query: 205     gaagaagttgccatcaagtttgaatgtgtcaaaactaagcaccctcagctccacatcgag 264
               ||||||||||| |||||| | || ||||| || || |||||||| ||||| |||||||||
Sbjct: 6890171 gaagaagttgctatcaagctcgagtgtgtgaagacaaagcacccccagctgcacatcgag 6890230

                                              
Query: 265     agcaaaatctacaagatgatgcagggaggag 295
               |||||  ||||||||||||||||||| ||||
Sbjct: 6890231 agcaagttctacaagatgatgcaggggggag 6890261



 Score = 73.8 bits (37), Expect = 2e-10
 Identities = 64/73 (87%)
 Strand = Plus / Plus

                                                                           
Query: 107     ccatggagctcagagtggggaacaggtaccggctgggccggaagatcggcagcgggtcct 166
               ||||||||||  | |||||||||| |||||| ||||||||||||||||| ||||| ||||
Sbjct: 6880901 ccatggagcttcgtgtggggaacaagtaccgcctgggccggaagatcgggagcggatcct 6880960

                            
Query: 167     tcggagacatcta 179
               | ||||| |||||
Sbjct: 6880961 ttggagatatcta 6880973


>Sscrofa_Chr02 
||          Length = 162569375

 Score = 63.9 bits (32), Expect = 1e-07
 Identities = 50/56 (89%)
 Strand = Plus / Minus

                                                                        
Query: 337      tacaacgtcatggtcatggagctgctggggcccagcctggaggacctcttcaactt 392
                ||||||| ||||||  |||||||||| |||||||||||||||||||| ||| ||||
Sbjct: 77281803 tacaacgccatggtgctggagctgctcgggcccagcctggaggacctgttcgactt 77281748


  Database: Sscrofa_10.2.fasta
    Posted date:  Nov 16, 2011 10:34 AM
  Number of letters in database: 2,808,509,378
  Number of sequences in database:  4582
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 18,705,513
Number of extensions: 112
Number of successful extensions: 112
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 112
Number of HSP's successfully gapped: 13
Length of query: 945
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 924
Effective length of database: 2,808,413,156
Effective search space: 2594973756144
Effective search space used: 2594973756144
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 29 (58.0 bits)