Animal-Genome cDNA 20110601C-001132

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-001132
         (3095 letters)

Database: RefSeq49_BP.fasta 
           33,088 sequences; 17,681,374 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001095550.1| casein kinase 1, delta [Bos taurus].              669   0.0  
Alignment   gi|NP_001071577.1| casein kinase 1 epsilon [Bos taurus].             596   e-170
Alignment   gi|NP_777136.1| casein kinase I isoform alpha [Bos taurus].          473   e-133
Alignment   gi|XP_002689948.1| PREDICTED: casein kinase I alpha-like [Bos t...   449   e-126
Alignment   gi|XP_002699872.1| PREDICTED: casein kinase I-like [Bos taurus].     438   e-122
Alignment   gi|XP_002707254.1| PREDICTED: casein kinase I-like [Bos taurus].     438   e-122
Alignment   gi|XP_002700117.1| PREDICTED: casein kinase I-like [Bos taurus].     416   e-116
Alignment   gi|XP_001788962.1| PREDICTED: casein kinase I-like [Bos taurus].     416   e-116
Alignment   gi|NP_001091628.1| casein kinase I isoform beta [Bos taurus].        407   e-113
Alignment   gi|XP_002687979.1| PREDICTED: casein kinase 1, delta [Bos tauru...   376   e-104

>ref|NP_001095550.1| casein kinase 1, delta [Bos taurus].
          Length = 409

 Score =  669 bits (1726), Expect = 0.0
 Identities = 335/376 (89%), Positives = 338/376 (89%)
 Frame = +1

Query: 319  MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQ 498
            MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQ
Sbjct: 1    MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQ 60

Query: 499  GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 678
            GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH
Sbjct: 61   GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 120

Query: 679  SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 858
            SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA
Sbjct: 121  SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 180

Query: 859  SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 1038
            SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL
Sbjct: 181  SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 240

Query: 1039 CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGASXX 1218
            CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGAS  
Sbjct: 241  CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGASRA 300

Query: 1219 XXXXXXXXXXXXXXLRHSRNPATRGLPSTASGRLRGTQEAAPPTPPHPYLTHGEHLSSAR 1398
                          LRHSRNPATRGLPSTASGRLRGTQE APPTP    LT   H ++  
Sbjct: 301  ADDAERERRDREERLRHSRNPATRGLPSTASGRLRGTQEVAPPTP----LTPTSHTANTS 356

Query: 1399 VRHGKRAESEYAAAPR 1446
             R     E E   + R
Sbjct: 357  PRPVSGMERERKVSMR 372



 Score =  122 bits (306), Expect = 2e-27
 Identities = 59/59 (100%), Positives = 59/59 (100%)
 Frame = +2

Query: 1370 HTANTSPRPVSGMERERKVSMRLHRGAPVNISSSDLTGRQDTSRMSTSQNSIPFEHHGK 1546
            HTANTSPRPVSGMERERKVSMRLHRGAPVNISSSDLTGRQDTSRMSTSQNSIPFEHHGK
Sbjct: 351  HTANTSPRPVSGMERERKVSMRLHRGAPVNISSSDLTGRQDTSRMSTSQNSIPFEHHGK 409


>ref|NP_001071577.1| casein kinase 1 epsilon [Bos taurus].
          Length = 466

 Score =  596 bits (1537), Expect = e-170
 Identities = 287/295 (97%), Positives = 293/295 (99%)
 Frame = +1

Query: 319  MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQ 498
            MELRVGN+YRLGRKIGSGSFGDIYLG +IA+GEEVAIKLECVKTKHPQLHIESK YKMMQ
Sbjct: 1    MELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQ 60

Query: 499  GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 678
            GGVGIP+I+WCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH
Sbjct: 61   GGVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 120

Query: 679  SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 858
            SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA
Sbjct: 121  SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 180

Query: 859  SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 1038
            SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL
Sbjct: 181  SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 240

Query: 1039 CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKF 1203
            CKGYPSEF+TYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKF
Sbjct: 241  CKGYPSEFSTYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKF 295


>ref|NP_777136.1| casein kinase I isoform alpha [Bos taurus].
          Length = 325

 Score =  473 bits (1216), Expect = e-133
 Identities = 223/293 (76%), Positives = 255/293 (87%)
 Frame = +1

Query: 322  ELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQG 501
            E  VG +Y+L RKIGSGSFGDIYL  +I  GEEVA+KLE  K +HPQL  ESK+YK++QG
Sbjct: 10   EFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKILQG 69

Query: 502  GVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 681
            GVGIP IRW G E DYNV+VM+LLGPSLEDLFNFCSR+F++KTVL+LADQMISRIEY+H+
Sbjct: 70   GVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYVHT 129

Query: 682  KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYAS 861
            KNFIHRD+KPDNFLMG+G+  N +++IDFGLAKKYRD RT QHIPYRE+KNLTGTARYAS
Sbjct: 130  KNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARYAS 189

Query: 862  INTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLC 1041
            IN HLGIEQSRRDD+ESLGYVLMYFN  SLPWQGLKAATK+QKYE+ISEKKMSTP+EVLC
Sbjct: 190  INAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATKKQKYEKISEKKMSTPVEVLC 249

Query: 1042 KGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLK 1200
            KG+P+EFA YLN+CR LRF++ PDY YLRQLFR LF      YDY FDW MLK
Sbjct: 250  KGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDWTMLK 302


>ref|XP_002689948.1| PREDICTED: casein kinase I alpha-like [Bos taurus].
          Length = 325

 Score =  449 bits (1155), Expect = e-126
 Identities = 212/293 (72%), Positives = 248/293 (84%)
 Frame = +1

Query: 322  ELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQG 501
            E  VG +Y+L RKI SGSFGD+YL  +I  GEEVA+KLE  K +HPQL  ESK+ K++QG
Sbjct: 10   EFIVGGKYKLVRKIRSGSFGDMYLAINITNGEEVAVKLESQKARHPQLLYESKLCKILQG 69

Query: 502  GVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 681
             VGIP IRW G + DYNV+VM+LLGPSLEDLFNFCSR+F++KTVL+LADQM+ RIEY+H+
Sbjct: 70   EVGIPHIRWYGQQKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMMGRIEYVHT 129

Query: 682  KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYAS 861
            KNFIHRD+KPDNFLMG+G+  N +++IDFGLAKKYRD RT QHIPYRE+KNLTGTARYAS
Sbjct: 130  KNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARYAS 189

Query: 862  INTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLC 1041
            I+ HLGIEQSRRDD+ESLGYVLMYFN  SLPWQGLKAATK+QKYE+ISEKKMSTP+EVLC
Sbjct: 190  ISAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATKKQKYEKISEKKMSTPVEVLC 249

Query: 1042 KGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLK 1200
            KG+P+EFA YLN+CR LRF++ PDY YLR LF  LF      YDY  DW MLK
Sbjct: 250  KGFPAEFAMYLNYCRGLRFEEAPDYMYLRHLFHILFRTLNHQYDYTSDWTMLK 302


>ref|XP_002699872.1| PREDICTED: casein kinase I-like [Bos taurus].
          Length = 333

 Score =  438 bits (1126), Expect = e-122
 Identities = 200/289 (69%), Positives = 245/289 (84%)
 Frame = +1

Query: 322  ELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQG 501
            E   G +Y+L RKIGSGSFG +YL  +I  GEEVA+KLE  K + PQL  ES++YK++QG
Sbjct: 10   EFIAGGKYKLVRKIGSGSFGKVYLAINITNGEEVAVKLEPQKARQPQLLYESRLYKLLQG 69

Query: 502  GVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 681
            GVGIP I W G E DYNV+VM+LLGPSLE+LFN+CSR+F++KTVL+LADQMISRIEY+H+
Sbjct: 70   GVGIPRIWWYGQEKDYNVLVMDLLGPSLEELFNYCSRRFTMKTVLMLADQMISRIEYLHT 129

Query: 682  KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYAS 861
            K+FIHRD+KPDNFLMG G   N ++++DFGLAK+YRD++T QHIPY+E K+LTGTARYAS
Sbjct: 130  KDFIHRDIKPDNFLMGAGSHCNQLFLVDFGLAKRYRDSKTKQHIPYKEKKSLTGTARYAS 189

Query: 862  INTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLC 1041
            +N+HLGIEQSRRDD+ESLGYVLMYFN  SLPWQG+K AT +QKYE+I E KM+TPIE LC
Sbjct: 190  LNSHLGIEQSRRDDMESLGYVLMYFNRSSLPWQGIKTATMKQKYEKICESKMATPIEALC 249

Query: 1042 KGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDW 1188
             G+PSEFATYLN+CR LRF++ PDY+YLRQLFR+LF    + YDY FDW
Sbjct: 250  NGFPSEFATYLNYCRGLRFEEAPDYTYLRQLFRSLFRTLNYQYDYAFDW 298


>ref|XP_002707254.1| PREDICTED: casein kinase I-like [Bos taurus].
          Length = 333

 Score =  438 bits (1126), Expect = e-122
 Identities = 200/289 (69%), Positives = 245/289 (84%)
 Frame = +1

Query: 322  ELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQG 501
            E   G +Y+L RKIGSGSFG +YL  +I  GEEVA+KLE  K + PQL  ES++YK++QG
Sbjct: 10   EFIAGGKYKLVRKIGSGSFGKVYLAINITNGEEVAVKLEPQKARQPQLLYESRLYKLLQG 69

Query: 502  GVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 681
            GVGIP I W G E DYNV+VM+LLGPSLE+LFN+CSR+F++KTVL+LADQMISRIEY+H+
Sbjct: 70   GVGIPRIWWYGQEKDYNVLVMDLLGPSLEELFNYCSRRFTMKTVLMLADQMISRIEYLHT 129

Query: 682  KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYAS 861
            K+FIHRD+KPDNFLMG G   N ++++DFGLAK+YRD++T QHIPY+E K+LTGTARYAS
Sbjct: 130  KDFIHRDIKPDNFLMGAGSHCNQLFLVDFGLAKRYRDSKTKQHIPYKEKKSLTGTARYAS 189

Query: 862  INTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLC 1041
            +N+HLGIEQSRRDD+ESLGYVLMYFN  SLPWQG+K AT +QKYE+I E KM+TPIE LC
Sbjct: 190  LNSHLGIEQSRRDDMESLGYVLMYFNRSSLPWQGIKTATMKQKYEKICESKMATPIEALC 249

Query: 1042 KGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDW 1188
             G+PSEFATYLN+CR LRF++ PDY+YLRQLFR+LF    + YDY FDW
Sbjct: 250  NGFPSEFATYLNYCRGLRFEEAPDYTYLRQLFRSLFRTLNYQYDYAFDW 298


>ref|XP_002700117.1| PREDICTED: casein kinase I-like [Bos taurus].
          Length = 336

 Score =  416 bits (1068), Expect = e-116
 Identities = 192/293 (65%), Positives = 241/293 (82%)
 Frame = +1

Query: 322  ELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQG 501
            ++ VG RY+L R+IGSGSFG ++L  D+   E+VA+KLE   T+ P+L  E ++Y ++QG
Sbjct: 10   DVLVGGRYKLVREIGSGSFGHVHLAIDLTNHEQVAVKLESQNTRQPRLLYEKELYNILQG 69

Query: 502  GVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 681
            GVGIP IRW G E DYNV+VM+LLGPSLEDLFNFCSR+FS+KTVL+LADQMISRIEY+H+
Sbjct: 70   GVGIPQIRWYGQETDYNVLVMDLLGPSLEDLFNFCSRRFSMKTVLMLADQMISRIEYVHT 129

Query: 682  KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYAS 861
            +N IHRD+KP+NFLMG G++   +++IDFGLAKKYRD RT QHIPYR  K+LTGT  +AS
Sbjct: 130  QNLIHRDIKPENFLMGTGQQWKELFLIDFGLAKKYRDNRTGQHIPYRSGKSLTGTPSFAS 189

Query: 862  INTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLC 1041
            I+ H+GIEQSRRDD+ES+G+VLMYFN GSLPWQGLKAAT +QK E+ISE KM+TP++VLC
Sbjct: 190  ISAHIGIEQSRRDDMESIGHVLMYFNRGSLPWQGLKAATMKQKCEQISEMKMTTPVDVLC 249

Query: 1042 KGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLK 1200
            KG+P+EFA YL  CR L F++ PDY YLRQLF  LF +  + YDY FDW +LK
Sbjct: 250  KGFPAEFAMYLKHCRGLSFEEAPDYRYLRQLFHMLFRKLNYQYDYAFDWIVLK 302


>ref|XP_001788962.1| PREDICTED: casein kinase I-like [Bos taurus].
          Length = 336

 Score =  416 bits (1068), Expect = e-116
 Identities = 192/293 (65%), Positives = 241/293 (82%)
 Frame = +1

Query: 322  ELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQG 501
            ++ VG RY+L R+IGSGSFG ++L  D+   E+VA+KLE   T+ P+L  E ++Y ++QG
Sbjct: 10   DVLVGGRYKLVREIGSGSFGHVHLAIDLTNHEQVAVKLESQNTRQPRLLYEKELYNILQG 69

Query: 502  GVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 681
            GVGIP IRW G E DYNV+VM+LLGPSLEDLFNFCSR+FS+KTVL+LADQMISRIEY+H+
Sbjct: 70   GVGIPQIRWYGQETDYNVLVMDLLGPSLEDLFNFCSRRFSMKTVLMLADQMISRIEYVHT 129

Query: 682  KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYAS 861
            +N IHRD+KP+NFLMG G++   +++IDFGLAKKYRD RT QHIPYR  K+LTGT  +AS
Sbjct: 130  QNLIHRDIKPENFLMGTGQQWKELFLIDFGLAKKYRDNRTGQHIPYRSGKSLTGTPSFAS 189

Query: 862  INTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLC 1041
            I+ H+GIEQSRRDD+ES+G+VLMYFN GSLPWQGLKAAT +QK E+ISE KM+TP++VLC
Sbjct: 190  ISAHIGIEQSRRDDMESIGHVLMYFNRGSLPWQGLKAATMKQKCEQISEMKMTTPVDVLC 249

Query: 1042 KGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLK 1200
            KG+P+EFA YL  CR L F++ PDY YLRQLF  LF +  + YDY FDW +LK
Sbjct: 250  KGFPAEFAMYLKHCRGLSFEEAPDYRYLRQLFHMLFRKLNYQYDYAFDWIVLK 302


>ref|NP_001091628.1| casein kinase I isoform beta [Bos taurus].
          Length = 336

 Score =  407 bits (1047), Expect = e-113
 Identities = 191/293 (65%), Positives = 235/293 (80%)
 Frame = +1

Query: 322  ELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQG 501
            ++ VG RY+L R+IG GSFG +YL  D+   E+VA+KLE   T+ P+L  E ++Y  +QG
Sbjct: 10   DVLVGGRYKLVREIGFGSFGHVYLAIDLTNHEQVAVKLESENTRQPRLLHEKELYNFLQG 69

Query: 502  GVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 681
            GVGIP IRW G E DYNV+VM+LLGPSLEDLFNFCSR+FS+KTVL+LADQMISRIEY+HS
Sbjct: 70   GVGIPQIRWYGQETDYNVLVMDLLGPSLEDLFNFCSRRFSMKTVLMLADQMISRIEYVHS 129

Query: 682  KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYAS 861
            +N IHRD+KPDNFLMG G +   ++++DFGLAKKYRD RT QHIP+R  K+  GT   AS
Sbjct: 130  RNLIHRDIKPDNFLMGTGPQWKKLFLVDFGLAKKYRDNRTGQHIPHRSGKSFIGTPFCAS 189

Query: 862  INTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLC 1041
            I+ HLGIEQSRRDD+ES+GYVLMYFN GSLPWQGLKAAT +QK E+ISE KM+TP++VLC
Sbjct: 190  ISAHLGIEQSRRDDMESIGYVLMYFNRGSLPWQGLKAATLKQKCEKISEMKMTTPVDVLC 249

Query: 1042 KGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLK 1200
            KG+P EFA YL +C  L F++ PDY YLRQLFR LF +  + +DY FDW +LK
Sbjct: 250  KGFPIEFAMYLKYCLRLSFEEAPDYRYLRQLFRLLFRKLSYQHDYAFDWIVLK 302


>ref|XP_002687979.1| PREDICTED: casein kinase 1, delta [Bos taurus].
          Length = 259

 Score =  376 bits (965), Expect = e-104
 Identities = 185/202 (91%), Positives = 192/202 (95%)
 Frame = +1

Query: 319 MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQ 498
           MELRVGN+YRLGRKIGSGSFGDIYLG +IA+GEEVAIKLECVKTKHPQLHIESK YKMMQ
Sbjct: 1   MELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQ 60

Query: 499 GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 678
           GGVGIP+I+WCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH
Sbjct: 61  GGVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 120

Query: 679 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 858
           SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA
Sbjct: 121 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 180

Query: 859 SINTHLGIEQSRRDDLESLGYV 924
           SINTHLGI +  R    S GY+
Sbjct: 181 SINTHLGIGECARPG--SRGYL 200


  Database: RefSeq49_BP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 17,681,374
  Number of sequences in database:  33,088
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 110,359,855
Number of extensions: 3132556
Number of successful extensions: 20213
Number of sequences better than 1.0e-05: 175
Number of HSP's gapped: 19743
Number of HSP's successfully gapped: 176
Length of query: 1031
Length of database: 17,681,374
Length adjustment: 112
Effective length of query: 919
Effective length of database: 13,975,518
Effective search space: 12843501042
Effective search space used: 12843501042
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-001132
         (3095 letters)

Database: RefSeq49_CP.fasta 
           33,336 sequences; 18,874,504 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_850168.1| PREDICTED: similar to casein kinase 1 epsilon i...   605   0.0  
Alignment   gi|XP_860987.1| PREDICTED: similar to casein kinase 1 epsilon i...   622   e-178
Alignment   gi|XP_860927.1| PREDICTED: similar to casein kinase 1 epsilon i...   553   e-177
Alignment   gi|XP_533137.2| PREDICTED: similar to casein kinase 1, delta is...   615   e-176
Alignment   gi|XP_861014.1| PREDICTED: similar to casein kinase 1 epsilon i...   605   e-174
Alignment   gi|XP_531738.2| PREDICTED: similar to casein kinase 1 epsilon i...   602   e-172
Alignment   gi|XP_860895.1| PREDICTED: similar to casein kinase 1 epsilon i...   417   e-136
Alignment   gi|XP_867771.1| PREDICTED: similar to casein kinase 1, alpha 1 ...   473   e-133
Alignment   gi|XP_536470.2| PREDICTED: similar to Casein kinase I, alpha is...   473   e-133
Alignment   gi|XP_867638.1| PREDICTED: similar to Casein kinase I, alpha is...   473   e-133

>ref|XP_850168.1| PREDICTED: similar to casein kinase 1 epsilon isoform 3 [Canis
            familiaris].
          Length = 416

 Score =  605 bits (1560), Expect(2) = 0.0
 Identities = 302/352 (85%), Positives = 310/352 (88%), Gaps = 7/352 (1%)
 Frame = +1

Query: 319  MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQ 498
            MELRVGN+YRLGRKIGSGSFGDIYLG +IA+GEEVAIKLECVKTKHPQLHIESK YKMMQ
Sbjct: 1    MELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQ 60

Query: 499  GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 678
            GGVGIP+I+WCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH
Sbjct: 61   GGVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 120

Query: 679  SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 858
            SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA
Sbjct: 121  SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 180

Query: 859  SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 1038
            SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL
Sbjct: 181  SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 240

Query: 1039 CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGASXX 1218
            CKGYPSEF+TYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGA+  
Sbjct: 241  CKGYPSEFSTYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGAARN 300

Query: 1219 XXXXXXXXXXXXXXLR--HSRNPATRGLP-----STASGRLRGTQEAAPPTP 1353
                           R    R  ATR LP        + RLR   E    TP
Sbjct: 301  PEDVDRERREHEREERMGQLRGSATRALPPGPPTGATANRLRSAAEPTASTP 352



 Score = 89.7 bits (221), Expect(2) = 0.0
 Identities = 41/56 (73%), Positives = 49/56 (87%)
 Frame = +2

Query: 1379 NTSPRPVSGMERERKVSMRLHRGAPVNISSSDLTGRQDTSRMSTSQNSIPFEHHGK 1546
            NTSPR +S ++RERKVSMRLHRGAP N+SSSDLTGRQ+ SR+S SQ S+PF+H GK
Sbjct: 361  NTSPRAISRVDRERKVSMRLHRGAPANVSSSDLTGRQEVSRISASQTSVPFDHLGK 416


>ref|XP_860987.1| PREDICTED: similar to casein kinase 1 epsilon isoform 7 [Canis
            familiaris].
          Length = 431

 Score =  622 bits (1605), Expect = e-178
 Identities = 322/429 (75%), Positives = 336/429 (78%), Gaps = 29/429 (6%)
 Frame = +1

Query: 319  MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQ 498
            MELRVGN+YRLGRKIGSGSFGDIYLG +IA+GEEVAIKLECVKTKHPQLHIESK YKMMQ
Sbjct: 1    MELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQ 60

Query: 499  GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 678
            GGVGIP+I+WCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH
Sbjct: 61   GGVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 120

Query: 679  SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 858
            SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA
Sbjct: 121  SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 180

Query: 859  SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 1038
            SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL
Sbjct: 181  SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 240

Query: 1039 CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGASXX 1218
            CKGYPSEF+TYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKF     
Sbjct: 241  CKGYPSEFSTYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFMRPPS 300

Query: 1219 XXXXXXXXXXXXXXLRHSRNPATRGL-PSTASGRLRGTQEAAP---PTPPHPYLTHG--- 1377
                          L   R P  RG  P  A  R RG   AAP      P P+ THG   
Sbjct: 301  CQPPALPCGRPQDQL--GRGPEPRGCGPGAARTRARGEDGAAPGFRDPGPAPWATHGGHR 358

Query: 1378 ----------------------EHLSSARVRHGKRAESEYAAAPRGPRQHLLVRPHGPAR 1491
                                  +H S   +   +R E E+       RQ L++RPH  AR
Sbjct: 359  QPAPQCCRAHSFHPSLPHPASWQHFSQGDLTSRQREEGEHETTQGCARQRLILRPHWAAR 418

Query: 1492 YLPHVHLTE 1518
             LP   LT+
Sbjct: 419  GLPDFSLTD 427


>ref|XP_860927.1| PREDICTED: similar to casein kinase 1 epsilon isoform 6 [Canis
            familiaris].
          Length = 407

 Score =  553 bits (1425), Expect(2) = e-177
 Identities = 283/352 (80%), Positives = 295/352 (83%), Gaps = 7/352 (1%)
 Frame = +1

Query: 319  MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQ 498
            MELRVGN+YRLGRKIGSGSFGDIYLG +IA+GEEVAIKLECVKTKHPQLHIESK YKMMQ
Sbjct: 1    MELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQ 60

Query: 499  GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 678
            GGVGIP+I+WCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH
Sbjct: 61   GGVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 120

Query: 679  SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 858
            SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA
Sbjct: 121  SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 180

Query: 859  SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 1038
            SINTHLGI +       S+G ++      SLPWQGLKAATKRQKYERISEKKMSTPIEVL
Sbjct: 181  SINTHLGIGEP-----FSVGGMI----TRSLPWQGLKAATKRQKYERISEKKMSTPIEVL 231

Query: 1039 CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGASXX 1218
            CKGYPSEF+TYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGA+  
Sbjct: 232  CKGYPSEFSTYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGAARN 291

Query: 1219 XXXXXXXXXXXXXXLR--HSRNPATRGLP-----STASGRLRGTQEAAPPTP 1353
                           R    R  ATR LP        + RLR   E    TP
Sbjct: 292  PEDVDRERREHEREERMGQLRGSATRALPPGPPTGATANRLRSAAEPTASTP 343



 Score = 89.7 bits (221), Expect(2) = e-177
 Identities = 41/56 (73%), Positives = 49/56 (87%)
 Frame = +2

Query: 1379 NTSPRPVSGMERERKVSMRLHRGAPVNISSSDLTGRQDTSRMSTSQNSIPFEHHGK 1546
            NTSPR +S ++RERKVSMRLHRGAP N+SSSDLTGRQ+ SR+S SQ S+PF+H GK
Sbjct: 352  NTSPRAISRVDRERKVSMRLHRGAPANVSSSDLTGRQEVSRISASQTSVPFDHLGK 407


>ref|XP_533137.2| PREDICTED: similar to casein kinase 1, delta isoform 2 [Canis
            familiaris].
          Length = 393

 Score =  615 bits (1587), Expect = e-176
 Identities = 308/351 (87%), Positives = 311/351 (88%)
 Frame = +1

Query: 394  GTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL 573
            GTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL
Sbjct: 10   GTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL 69

Query: 574  GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLV 753
            GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLV
Sbjct: 70   GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLV 129

Query: 754  YIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMY 933
            YIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMY
Sbjct: 130  YIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMY 189

Query: 934  FNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPD 1113
            FNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCK YPSEFATYLNFCRSLRFDDKPD
Sbjct: 190  FNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKSYPSEFATYLNFCRSLRFDDKPD 249

Query: 1114 YSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGASXXXXXXXXXXXXXXXXLRHSRNPATRG 1293
            YSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGAS                LRHSRNPA RG
Sbjct: 250  YSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGASRAADDAERERRDREERLRHSRNPAARG 309

Query: 1294 LPSTASGRLRGTQEAAPPTPPHPYLTHGEHLSSARVRHGKRAESEYAAAPR 1446
            LPSTASGRLRGTQE APPTP    LT   H ++   R     E E   + R
Sbjct: 310  LPSTASGRLRGTQEVAPPTP----LTPTSHTANTSPRPVSGVERERKVSMR 356



 Score =  120 bits (302), Expect = 6e-27
 Identities = 58/59 (98%), Positives = 59/59 (100%)
 Frame = +2

Query: 1370 HTANTSPRPVSGMERERKVSMRLHRGAPVNISSSDLTGRQDTSRMSTSQNSIPFEHHGK 1546
            HTANTSPRPVSG+ERERKVSMRLHRGAPVNISSSDLTGRQDTSRMSTSQNSIPFEHHGK
Sbjct: 335  HTANTSPRPVSGVERERKVSMRLHRGAPVNISSSDLTGRQDTSRMSTSQNSIPFEHHGK 393


>ref|XP_861014.1| PREDICTED: similar to casein kinase 1 epsilon isoform 8 [Canis
            familiaris].
          Length = 385

 Score =  605 bits (1560), Expect(2) = e-174
 Identities = 302/352 (85%), Positives = 310/352 (88%), Gaps = 7/352 (1%)
 Frame = +1

Query: 319  MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQ 498
            MELRVGN+YRLGRKIGSGSFGDIYLG +IA+GEEVAIKLECVKTKHPQLHIESK YKMMQ
Sbjct: 1    MELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQ 60

Query: 499  GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 678
            GGVGIP+I+WCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH
Sbjct: 61   GGVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 120

Query: 679  SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 858
            SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA
Sbjct: 121  SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 180

Query: 859  SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 1038
            SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL
Sbjct: 181  SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 240

Query: 1039 CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGASXX 1218
            CKGYPSEF+TYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGA+  
Sbjct: 241  CKGYPSEFSTYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGAARN 300

Query: 1219 XXXXXXXXXXXXXXLR--HSRNPATRGLP-----STASGRLRGTQEAAPPTP 1353
                           R    R  ATR LP        + RLR   E    TP
Sbjct: 301  PEDVDRERREHEREERMGQLRGSATRALPPGPPTGATANRLRSAAEPTASTP 352



 Score = 27.3 bits (59), Expect(2) = e-174
 Identities = 11/18 (61%), Positives = 15/18 (83%)
 Frame = +2

Query: 1379 NTSPRPVSGMERERKVSM 1432
            NTSPR +S ++RERK S+
Sbjct: 361  NTSPRAISRVDRERKTSV 378


>ref|XP_531738.2| PREDICTED: similar to casein kinase 1 epsilon isoform 1 [Canis
            familiaris].
          Length = 367

 Score =  602 bits (1551), Expect = e-172
 Identities = 290/298 (97%), Positives = 296/298 (99%)
 Frame = +1

Query: 319  MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQ 498
            MELRVGN+YRLGRKIGSGSFGDIYLG +IA+GEEVAIKLECVKTKHPQLHIESK YKMMQ
Sbjct: 1    MELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQ 60

Query: 499  GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 678
            GGVGIP+I+WCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH
Sbjct: 61   GGVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 120

Query: 679  SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 858
            SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA
Sbjct: 121  SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 180

Query: 859  SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 1038
            SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL
Sbjct: 181  SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 240

Query: 1039 CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGAS 1212
            CKGYPSEF+TYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGAS
Sbjct: 241  CKGYPSEFSTYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGAS 298


>ref|XP_860895.1| PREDICTED: similar to casein kinase 1 epsilon isoform 5 [Canis
            familiaris].
          Length = 359

 Score =  417 bits (1072), Expect(2) = e-136
 Identities = 227/352 (64%), Positives = 242/352 (68%), Gaps = 7/352 (1%)
 Frame = +1

Query: 319  MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQ 498
            MELRVGN+YRLGRKIGSGSFGDIYLG +IA+GEEVAIKLECVKTKHPQLHIESK YKMMQ
Sbjct: 1    MELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQ 60

Query: 499  GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 678
            GGVGIP+I+WCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH
Sbjct: 61   GGVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 120

Query: 679  SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 858
            SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHI               
Sbjct: 121  SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHI--------------- 165

Query: 859  SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 1038
                                           P++  K  T   +Y  I+     T + + 
Sbjct: 166  -------------------------------PYRENKNLTGTARYASIN-----THLGI- 188

Query: 1039 CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGASXX 1218
                 +EF+TYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGA+  
Sbjct: 189  -----AEFSTYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGAARN 243

Query: 1219 XXXXXXXXXXXXXXLR--HSRNPATRGLP-----STASGRLRGTQEAAPPTP 1353
                           R    R  ATR LP        + RLR   E    TP
Sbjct: 244  PEDVDRERREHEREERMGQLRGSATRALPPGPPTGATANRLRSAAEPTASTP 295



 Score = 89.7 bits (221), Expect(2) = e-136
 Identities = 41/56 (73%), Positives = 49/56 (87%)
 Frame = +2

Query: 1379 NTSPRPVSGMERERKVSMRLHRGAPVNISSSDLTGRQDTSRMSTSQNSIPFEHHGK 1546
            NTSPR +S ++RERKVSMRLHRGAP N+SSSDLTGRQ+ SR+S SQ S+PF+H GK
Sbjct: 304  NTSPRAISRVDRERKVSMRLHRGAPANVSSSDLTGRQEVSRISASQTSVPFDHLGK 359


>ref|XP_867771.1| PREDICTED: similar to casein kinase 1, alpha 1 isoform 15 [Canis
            familiaris].
          Length = 325

 Score =  473 bits (1216), Expect = e-133
 Identities = 223/293 (76%), Positives = 255/293 (87%)
 Frame = +1

Query: 322  ELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQG 501
            E  VG +Y+L RKIGSGSFGDIYL  +I  GEEVA+KLE  K +HPQL  ESK+YK++QG
Sbjct: 10   EFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKILQG 69

Query: 502  GVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 681
            GVGIP IRW G E DYNV+VM+LLGPSLEDLFNFCSR+F++KTVL+LADQMISRIEY+H+
Sbjct: 70   GVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYVHT 129

Query: 682  KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYAS 861
            KNFIHRD+KPDNFLMG+G+  N +++IDFGLAKKYRD RT QHIPYRE+KNLTGTARYAS
Sbjct: 130  KNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARYAS 189

Query: 862  INTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLC 1041
            IN HLGIEQSRRDD+ESLGYVLMYFN  SLPWQGLKAATK+QKYE+ISEKKMSTP+EVLC
Sbjct: 190  INAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATKKQKYEKISEKKMSTPVEVLC 249

Query: 1042 KGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLK 1200
            KG+P+EFA YLN+CR LRF++ PDY YLRQLFR LF      YDY FDW MLK
Sbjct: 250  KGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDWTMLK 302


>ref|XP_536470.2| PREDICTED: similar to Casein kinase I, alpha isoform (CKI-alpha)
            (CK1) isoform 1 [Canis familiaris].
          Length = 337

 Score =  473 bits (1216), Expect = e-133
 Identities = 223/293 (76%), Positives = 255/293 (87%)
 Frame = +1

Query: 322  ELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQG 501
            E  VG +Y+L RKIGSGSFGDIYL  +I  GEEVA+KLE  K +HPQL  ESK+YK++QG
Sbjct: 10   EFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKILQG 69

Query: 502  GVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 681
            GVGIP IRW G E DYNV+VM+LLGPSLEDLFNFCSR+F++KTVL+LADQMISRIEY+H+
Sbjct: 70   GVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYVHT 129

Query: 682  KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYAS 861
            KNFIHRD+KPDNFLMG+G+  N +++IDFGLAKKYRD RT QHIPYRE+KNLTGTARYAS
Sbjct: 130  KNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARYAS 189

Query: 862  INTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLC 1041
            IN HLGIEQSRRDD+ESLGYVLMYFN  SLPWQGLKAATK+QKYE+ISEKKMSTP+EVLC
Sbjct: 190  INAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATKKQKYEKISEKKMSTPVEVLC 249

Query: 1042 KGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLK 1200
            KG+P+EFA YLN+CR LRF++ PDY YLRQLFR LF      YDY FDW MLK
Sbjct: 250  KGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDWTMLK 302


>ref|XP_867638.1| PREDICTED: similar to Casein kinase I, alpha isoform (CKI-alpha)
            (CK1) isoform 3 [Canis familiaris].
          Length = 336

 Score =  473 bits (1216), Expect = e-133
 Identities = 223/293 (76%), Positives = 255/293 (87%)
 Frame = +1

Query: 322  ELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQG 501
            E  VG +Y+L RKIGSGSFGDIYL  +I  GEEVA+KLE  K +HPQL  ESK+YK++QG
Sbjct: 10   EFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKILQG 69

Query: 502  GVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 681
            GVGIP IRW G E DYNV+VM+LLGPSLEDLFNFCSR+F++KTVL+LADQMISRIEY+H+
Sbjct: 70   GVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYVHT 129

Query: 682  KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYAS 861
            KNFIHRD+KPDNFLMG+G+  N +++IDFGLAKKYRD RT QHIPYRE+KNLTGTARYAS
Sbjct: 130  KNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARYAS 189

Query: 862  INTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLC 1041
            IN HLGIEQSRRDD+ESLGYVLMYFN  SLPWQGLKAATK+QKYE+ISEKKMSTP+EVLC
Sbjct: 190  INAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATKKQKYEKISEKKMSTPVEVLC 249

Query: 1042 KGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLK 1200
            KG+P+EFA YLN+CR LRF++ PDY YLRQLFR LF      YDY FDW MLK
Sbjct: 250  KGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDWTMLK 302


  Database: RefSeq49_CP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,874,504
  Number of sequences in database:  33,336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 115,370,545
Number of extensions: 3239434
Number of successful extensions: 21389
Number of sequences better than 1.0e-05: 301
Number of HSP's gapped: 20791
Number of HSP's successfully gapped: 309
Length of query: 1031
Length of database: 18,874,504
Length adjustment: 113
Effective length of query: 918
Effective length of database: 15,107,536
Effective search space: 13868718048
Effective search space used: 13868718048
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-001132
         (3095 letters)

Database: RefSeq49_HP.fasta 
           32,964 sequences; 18,297,164 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_689407.1| casein kinase I isoform epsilon [Homo sapiens].      605   0.0  
Alignment   gi|NP_001885.1| casein kinase I isoform epsilon [Homo sapiens].      605   0.0  
Alignment   gi|NP_620693.1| casein kinase I isoform delta isoform 2 [Homo s...   669   0.0  
Alignment   gi|NP_001884.2| casein kinase I isoform delta isoform 1 [Homo s...   669   0.0  
Alignment   gi|NP_001883.4| casein kinase I isoform alpha isoform 2 [Homo s...   473   e-133
Alignment   gi|NP_001020276.1| casein kinase I isoform alpha isoform 1 [Hom...   457   e-128
Alignment   gi|NP_660204.2| casein kinase I isoform alpha-like [Homo sapien...   452   e-126
Alignment   gi|NP_071331.2| casein kinase I isoform gamma-1 [Homo sapiens].      359   7e-99
Alignment   gi|NP_001038188.1| casein kinase I isoform gamma-3 isoform 4 [H...   359   1e-98
Alignment   gi|NP_001038187.1| casein kinase I isoform gamma-3 isoform 3 [H...   359   1e-98

>ref|NP_689407.1| casein kinase I isoform epsilon [Homo sapiens].
          Length = 416

 Score =  605 bits (1560), Expect(2) = 0.0
 Identities = 302/352 (85%), Positives = 310/352 (88%), Gaps = 7/352 (1%)
 Frame = +1

Query: 319  MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQ 498
            MELRVGN+YRLGRKIGSGSFGDIYLG +IA+GEEVAIKLECVKTKHPQLHIESK YKMMQ
Sbjct: 1    MELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQ 60

Query: 499  GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 678
            GGVGIP+I+WCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH
Sbjct: 61   GGVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 120

Query: 679  SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 858
            SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA
Sbjct: 121  SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 180

Query: 859  SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 1038
            SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL
Sbjct: 181  SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 240

Query: 1039 CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGASXX 1218
            CKGYPSEF+TYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGA+  
Sbjct: 241  CKGYPSEFSTYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGAARN 300

Query: 1219 XXXXXXXXXXXXXXLR--HSRNPATRGLP-----STASGRLRGTQEAAPPTP 1353
                           R    R  ATR LP        + RLR   E    TP
Sbjct: 301  PEDVDRERREHEREERMGQLRGSATRALPPGPPTGATANRLRSAAEPVASTP 352



 Score = 87.8 bits (216), Expect(2) = 0.0
 Identities = 40/56 (71%), Positives = 48/56 (85%)
 Frame = +2

Query: 1379 NTSPRPVSGMERERKVSMRLHRGAPVNISSSDLTGRQDTSRMSTSQNSIPFEHHGK 1546
            NTSPR +S ++RERKVSMRLHRGAP N+SSSDLTGRQ+ SR+  SQ S+PF+H GK
Sbjct: 361  NTSPRAISRVDRERKVSMRLHRGAPANVSSSDLTGRQEVSRIPASQTSVPFDHLGK 416


>ref|NP_001885.1| casein kinase I isoform epsilon [Homo sapiens].
          Length = 416

 Score =  605 bits (1560), Expect(2) = 0.0
 Identities = 302/352 (85%), Positives = 310/352 (88%), Gaps = 7/352 (1%)
 Frame = +1

Query: 319  MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQ 498
            MELRVGN+YRLGRKIGSGSFGDIYLG +IA+GEEVAIKLECVKTKHPQLHIESK YKMMQ
Sbjct: 1    MELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQ 60

Query: 499  GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 678
            GGVGIP+I+WCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH
Sbjct: 61   GGVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 120

Query: 679  SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 858
            SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA
Sbjct: 121  SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 180

Query: 859  SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 1038
            SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL
Sbjct: 181  SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 240

Query: 1039 CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGASXX 1218
            CKGYPSEF+TYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGA+  
Sbjct: 241  CKGYPSEFSTYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGAARN 300

Query: 1219 XXXXXXXXXXXXXXLR--HSRNPATRGLP-----STASGRLRGTQEAAPPTP 1353
                           R    R  ATR LP        + RLR   E    TP
Sbjct: 301  PEDVDRERREHEREERMGQLRGSATRALPPGPPTGATANRLRSAAEPVASTP 352



 Score = 87.8 bits (216), Expect(2) = 0.0
 Identities = 40/56 (71%), Positives = 48/56 (85%)
 Frame = +2

Query: 1379 NTSPRPVSGMERERKVSMRLHRGAPVNISSSDLTGRQDTSRMSTSQNSIPFEHHGK 1546
            NTSPR +S ++RERKVSMRLHRGAP N+SSSDLTGRQ+ SR+  SQ S+PF+H GK
Sbjct: 361  NTSPRAISRVDRERKVSMRLHRGAPANVSSSDLTGRQEVSRIPASQTSVPFDHLGK 416


>ref|NP_620693.1| casein kinase I isoform delta isoform 2 [Homo sapiens].
          Length = 409

 Score =  669 bits (1726), Expect = 0.0
 Identities = 335/376 (89%), Positives = 338/376 (89%)
 Frame = +1

Query: 319  MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQ 498
            MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQ
Sbjct: 1    MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQ 60

Query: 499  GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 678
            GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH
Sbjct: 61   GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 120

Query: 679  SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 858
            SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA
Sbjct: 121  SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 180

Query: 859  SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 1038
            SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL
Sbjct: 181  SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 240

Query: 1039 CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGASXX 1218
            CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGAS  
Sbjct: 241  CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGASRA 300

Query: 1219 XXXXXXXXXXXXXXLRHSRNPATRGLPSTASGRLRGTQEAAPPTPPHPYLTHGEHLSSAR 1398
                          LRHSRNPATRGLPSTASGRLRGTQE APPTP    LT   H ++  
Sbjct: 301  ADDAERERRDREERLRHSRNPATRGLPSTASGRLRGTQEVAPPTP----LTPTSHTANTS 356

Query: 1399 VRHGKRAESEYAAAPR 1446
             R     E E   + R
Sbjct: 357  PRPVSGMERERKVSMR 372



 Score =  122 bits (306), Expect = 2e-27
 Identities = 59/59 (100%), Positives = 59/59 (100%)
 Frame = +2

Query: 1370 HTANTSPRPVSGMERERKVSMRLHRGAPVNISSSDLTGRQDTSRMSTSQNSIPFEHHGK 1546
            HTANTSPRPVSGMERERKVSMRLHRGAPVNISSSDLTGRQDTSRMSTSQNSIPFEHHGK
Sbjct: 351  HTANTSPRPVSGMERERKVSMRLHRGAPVNISSSDLTGRQDTSRMSTSQNSIPFEHHGK 409


>ref|NP_001884.2| casein kinase I isoform delta isoform 1 [Homo sapiens].
          Length = 415

 Score =  669 bits (1726), Expect = 0.0
 Identities = 335/376 (89%), Positives = 338/376 (89%)
 Frame = +1

Query: 319  MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQ 498
            MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQ
Sbjct: 1    MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQ 60

Query: 499  GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 678
            GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH
Sbjct: 61   GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 120

Query: 679  SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 858
            SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA
Sbjct: 121  SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 180

Query: 859  SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 1038
            SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL
Sbjct: 181  SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 240

Query: 1039 CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGASXX 1218
            CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGAS  
Sbjct: 241  CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGASRA 300

Query: 1219 XXXXXXXXXXXXXXLRHSRNPATRGLPSTASGRLRGTQEAAPPTPPHPYLTHGEHLSSAR 1398
                          LRHSRNPATRGLPSTASGRLRGTQE APPTP    LT   H ++  
Sbjct: 301  ADDAERERRDREERLRHSRNPATRGLPSTASGRLRGTQEVAPPTP----LTPTSHTANTS 356

Query: 1399 VRHGKRAESEYAAAPR 1446
             R     E E   + R
Sbjct: 357  PRPVSGMERERKVSMR 372



 Score = 99.8 bits (247), Expect(2) = 5e-23
 Identities = 49/49 (100%), Positives = 49/49 (100%)
 Frame = +2

Query: 1370 HTANTSPRPVSGMERERKVSMRLHRGAPVNISSSDLTGRQDTSRMSTSQ 1516
            HTANTSPRPVSGMERERKVSMRLHRGAPVNISSSDLTGRQDTSRMSTSQ
Sbjct: 351  HTANTSPRPVSGMERERKVSMRLHRGAPVNISSSDLTGRQDTSRMSTSQ 399



 Score = 28.9 bits (63), Expect(2) = 5e-23
 Identities = 13/16 (81%), Positives = 14/16 (87%)
 Frame = +3

Query: 1581 IAGRVAASGLQSAVHR 1628
            I GRVA+SGLQS VHR
Sbjct: 400  IPGRVASSGLQSVVHR 415


>ref|NP_001883.4| casein kinase I isoform alpha isoform 2 [Homo sapiens].
          Length = 337

 Score =  473 bits (1216), Expect = e-133
 Identities = 223/293 (76%), Positives = 255/293 (87%)
 Frame = +1

Query: 322  ELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQG 501
            E  VG +Y+L RKIGSGSFGDIYL  +I  GEEVA+KLE  K +HPQL  ESK+YK++QG
Sbjct: 10   EFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKILQG 69

Query: 502  GVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 681
            GVGIP IRW G E DYNV+VM+LLGPSLEDLFNFCSR+F++KTVL+LADQMISRIEY+H+
Sbjct: 70   GVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYVHT 129

Query: 682  KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYAS 861
            KNFIHRD+KPDNFLMG+G+  N +++IDFGLAKKYRD RT QHIPYRE+KNLTGTARYAS
Sbjct: 130  KNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARYAS 189

Query: 862  INTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLC 1041
            IN HLGIEQSRRDD+ESLGYVLMYFN  SLPWQGLKAATK+QKYE+ISEKKMSTP+EVLC
Sbjct: 190  INAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATKKQKYEKISEKKMSTPVEVLC 249

Query: 1042 KGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLK 1200
            KG+P+EFA YLN+CR LRF++ PDY YLRQLFR LF      YDY FDW MLK
Sbjct: 250  KGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDWTMLK 302


>ref|NP_001020276.1| casein kinase I isoform alpha isoform 1 [Homo sapiens].
          Length = 365

 Score =  457 bits (1177), Expect = e-128
 Identities = 223/321 (69%), Positives = 255/321 (79%), Gaps = 28/321 (8%)
 Frame = +1

Query: 322  ELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQG 501
            E  VG +Y+L RKIGSGSFGDIYL  +I  GEEVA+KLE  K +HPQL  ESK+YK++QG
Sbjct: 10   EFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKILQG 69

Query: 502  GVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 681
            GVGIP IRW G E DYNV+VM+LLGPSLEDLFNFCSR+F++KTVL+LADQMISRIEY+H+
Sbjct: 70   GVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYVHT 129

Query: 682  KNFIHRDVKPDNFLMGLGKKGNL----------------------------VYIIDFGLA 777
            KNFIHRD+KPDNFLMG+G+  N                             +++IDFGLA
Sbjct: 130  KNFIHRDIKPDNFLMGIGRHCNKCLESPVGKRKRSMTVSTSQDPSFSGLNQLFLIDFGLA 189

Query: 778  KKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPW 957
            KKYRD RT QHIPYRE+KNLTGTARYASIN HLGIEQSRRDD+ESLGYVLMYFN  SLPW
Sbjct: 190  KKYRDNRTRQHIPYREDKNLTGTARYASINAHLGIEQSRRDDMESLGYVLMYFNRTSLPW 249

Query: 958  QGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLF 1137
            QGLKAATK+QKYE+ISEKKMSTP+EVLCKG+P+EFA YLN+CR LRF++ PDY YLRQLF
Sbjct: 250  QGLKAATKKQKYEKISEKKMSTPVEVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLF 309

Query: 1138 RNLFHRQGFSYDYVFDWNMLK 1200
            R LF      YDY FDW MLK
Sbjct: 310  RILFRTLNHQYDYTFDWTMLK 330


>ref|NP_660204.2| casein kinase I isoform alpha-like [Homo sapiens].
          Length = 337

 Score =  452 bits (1162), Expect = e-126
 Identities = 212/293 (72%), Positives = 247/293 (84%)
 Frame = +1

Query: 322  ELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQG 501
            EL VG +Y+L RKIGSGSFGD+YLG     GE+VA+KLE  K KHPQL  ESK+Y ++QG
Sbjct: 10   ELVVGGKYKLVRKIGSGSFGDVYLGITTTNGEDVAVKLESQKVKHPQLLYESKLYTILQG 69

Query: 502  GVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 681
            GVGIP + W G E D NV+VM+LLGPSLEDLFNFCSR+F++KTVL+LADQMISRIEY+H+
Sbjct: 70   GVGIPHMHWYGQEKDNNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYVHT 129

Query: 682  KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYAS 861
            KNF+HRD+KPDNFLMG G+  N +++IDFGLAKKYRD RT QHIPYRE+K+L GT RYAS
Sbjct: 130  KNFLHRDIKPDNFLMGTGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKHLIGTVRYAS 189

Query: 862  INTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLC 1041
            IN HLGIEQSRRDD+ESLGYV MYFN  SLPWQGL+A TK+QKYE+ISEKKMSTP+EVLC
Sbjct: 190  INAHLGIEQSRRDDMESLGYVFMYFNRTSLPWQGLRAMTKKQKYEKISEKKMSTPVEVLC 249

Query: 1042 KGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLK 1200
            KG+P+EFA YLN+CR LRF++ PDY YLRQLFR LF      YDY FDW MLK
Sbjct: 250  KGFPAEFAMYLNYCRGLRFEEVPDYMYLRQLFRILFRTLNHQYDYTFDWTMLK 302


>ref|NP_071331.2| casein kinase I isoform gamma-1 [Homo sapiens].
          Length = 422

 Score =  359 bits (922), Expect = 7e-99
 Identities = 169/291 (58%), Positives = 227/291 (78%), Gaps = 3/291 (1%)
 Frame = +1

Query: 325  LRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMM-QG 501
            L VG  +R+G+KIG G+FG++ LG ++   E VAIKLE +K++ PQLH+E + YK +   
Sbjct: 38   LMVGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPIKSRAPQLHLEYRFYKQLGSA 97

Query: 502  GVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 681
            G G+P + + G  G YN MV+ELLGPSLEDLF+ C R F+LKTVL++A Q++SR+EY+HS
Sbjct: 98   GEGLPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFTLKTVLMIAIQLLSRMEYVHS 157

Query: 682  KNFIHRDVKPDNFLMGL--GKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARY 855
            KN I+RDVKP+NFL+G    KK ++++IIDFGLAK+Y D  T +HIPYRE+K+LTGTARY
Sbjct: 158  KNLIYRDVKPENFLIGRQGNKKEHVIHIIDFGLAKEYIDPETKKHIPYREHKSLTGTARY 217

Query: 856  ASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEV 1035
             SINTHLG EQSRRDDLE+LG++ MYF  GSLPWQGLKA T +++Y++I + K +TPIE 
Sbjct: 218  MSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRNTPIEA 277

Query: 1036 LCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDW 1188
            LC+ +P E ATYL + R L F +KPDY YLR LF +LF ++G+++DY +DW
Sbjct: 278  LCENFPEEMATYLRYVRRLDFFEKPDYEYLRTLFTDLFEKKGYTFDYAYDW 328


>ref|NP_001038188.1| casein kinase I isoform gamma-3 isoform 4 [Homo sapiens].
          Length = 455

 Score =  359 bits (921), Expect = 1e-98
 Identities = 173/290 (59%), Positives = 226/290 (77%), Gaps = 2/290 (0%)
 Frame = +1

Query: 325  LRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGG 504
            L VG  +R+G+KIG G+FG++ LG ++   E VAIKLE +K++ PQLH+E + YK +  G
Sbjct: 37   LMVGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSG 96

Query: 505  VGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK 684
             GIP + + G  G YN MV+ELLGPSLEDLF+ C R FSLKTVL++A Q+ISR+EY+HSK
Sbjct: 97   DGIPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSK 156

Query: 685  NFIHRDVKPDNFLMGL--GKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 858
            N I+RDVKP+NFL+G    K   +++IIDFGLAK+Y D  T +HIPYRE+K+LTGTARY 
Sbjct: 157  NLIYRDVKPENFLIGRPGNKTQQVIHIIDFGLAKEYIDPETKKHIPYREHKSLTGTARYM 216

Query: 859  SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 1038
            SINTHLG EQSRRDDLE+LG++ MYF  GSLPWQGLKA T +++Y++I + K +TPIEVL
Sbjct: 217  SINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVL 276

Query: 1039 CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDW 1188
            C+ +P E ATYL + R L F +KPDY YLR+LF +LF R+G+ +DY +DW
Sbjct: 277  CENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRKGYMFDYEYDW 325


>ref|NP_001038187.1| casein kinase I isoform gamma-3 isoform 3 [Homo sapiens].
          Length = 415

 Score =  359 bits (921), Expect = 1e-98
 Identities = 173/290 (59%), Positives = 226/290 (77%), Gaps = 2/290 (0%)
 Frame = +1

Query: 325  LRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGG 504
            L VG  +R+G+KIG G+FG++ LG ++   E VAIKLE +K++ PQLH+E + YK +  G
Sbjct: 37   LMVGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSG 96

Query: 505  VGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK 684
             GIP + + G  G YN MV+ELLGPSLEDLF+ C R FSLKTVL++A Q+ISR+EY+HSK
Sbjct: 97   DGIPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSK 156

Query: 685  NFIHRDVKPDNFLMGL--GKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 858
            N I+RDVKP+NFL+G    K   +++IIDFGLAK+Y D  T +HIPYRE+K+LTGTARY 
Sbjct: 157  NLIYRDVKPENFLIGRPGNKTQQVIHIIDFGLAKEYIDPETKKHIPYREHKSLTGTARYM 216

Query: 859  SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 1038
            SINTHLG EQSRRDDLE+LG++ MYF  GSLPWQGLKA T +++Y++I + K +TPIEVL
Sbjct: 217  SINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVL 276

Query: 1039 CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDW 1188
            C+ +P E ATYL + R L F +KPDY YLR+LF +LF R+G+ +DY +DW
Sbjct: 277  CENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRKGYMFDYEYDW 325


  Database: RefSeq49_HP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,297,164
  Number of sequences in database:  32,964
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 112,377,335
Number of extensions: 3140676
Number of successful extensions: 19979
Number of sequences better than 1.0e-05: 259
Number of HSP's gapped: 19331
Number of HSP's successfully gapped: 264
Length of query: 1031
Length of database: 18,297,164
Length adjustment: 113
Effective length of query: 918
Effective length of database: 14,572,232
Effective search space: 13377308976
Effective search space used: 13377308976
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-001132
         (3095 letters)

Database: RefSeq49_MP.fasta 
           30,036 sequences; 15,617,559 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_038795.3| casein kinase I isoform epsilon [Mus musculus].      605   0.0  
Alignment   gi|NP_620690.1| casein kinase I isoform delta isoform 1 [Mus mu...   669   0.0  
Alignment   gi|NP_082150.1| casein kinase I isoform delta isoform 2 [Mus mu...   669   0.0  
Alignment   gi|NP_666199.1| casein kinase I isoform alpha [Mus musculus].        473   e-133
Alignment   gi|NP_690022.2| casein kinase I isoform gamma-3 [Mus musculus].      363   e-100
Alignment   gi|NP_775277.2| casein kinase I isoform gamma-1 [Mus musculus].      360   3e-99
Alignment   gi|NP_001153063.1| casein kinase I isoform gamma-2 isoform 2 [M...   355   9e-98
Alignment   gi|NP_598763.1| casein kinase I isoform gamma-2 isoform 1 [Mus ...   342   1e-93
Alignment   gi|NP_001156336.1| tau-tubulin kinase 1 [Mus musculus].              180   7e-45
Alignment   gi|NP_001020028.1| tau-tubulin kinase 2 isoform 2 [Mus musculus].    170   5e-42

>ref|NP_038795.3| casein kinase I isoform epsilon [Mus musculus].
          Length = 416

 Score =  605 bits (1560), Expect(2) = 0.0
 Identities = 302/352 (85%), Positives = 310/352 (88%), Gaps = 7/352 (1%)
 Frame = +1

Query: 319  MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQ 498
            MELRVGN+YRLGRKIGSGSFGDIYLG +IA+GEEVAIKLECVKTKHPQLHIESK YKMMQ
Sbjct: 1    MELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQ 60

Query: 499  GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 678
            GGVGIP+I+WCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH
Sbjct: 61   GGVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 120

Query: 679  SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 858
            SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA
Sbjct: 121  SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 180

Query: 859  SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 1038
            SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL
Sbjct: 181  SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 240

Query: 1039 CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGASXX 1218
            CKGYPSEF+TYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGA+  
Sbjct: 241  CKGYPSEFSTYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGAARN 300

Query: 1219 XXXXXXXXXXXXXXLR--HSRNPATRGLP-----STASGRLRGTQEAAPPTP 1353
                           R    R  ATR LP        + RLR   E    TP
Sbjct: 301  PEDVDRERREHEREERMGQLRGSATRALPPGPPTGATANRLRSAAEPVASTP 352



 Score = 90.1 bits (222), Expect(2) = 0.0
 Identities = 41/58 (70%), Positives = 49/58 (84%)
 Frame = +2

Query: 1373 TANTSPRPVSGMERERKVSMRLHRGAPVNISSSDLTGRQDTSRMSTSQNSIPFEHHGK 1546
            T NTSPR +S  +RERKVSMRLHRGAP N+SSSDLTGRQ+ SR++ SQ S+PF+H GK
Sbjct: 359  TGNTSPRAISRADRERKVSMRLHRGAPANVSSSDLTGRQEVSRLAASQTSVPFDHLGK 416


>ref|NP_620690.1| casein kinase I isoform delta isoform 1 [Mus musculus].
          Length = 415

 Score =  669 bits (1726), Expect = 0.0
 Identities = 335/376 (89%), Positives = 338/376 (89%)
 Frame = +1

Query: 319  MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQ 498
            MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQ
Sbjct: 1    MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQ 60

Query: 499  GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 678
            GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH
Sbjct: 61   GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 120

Query: 679  SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 858
            SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA
Sbjct: 121  SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 180

Query: 859  SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 1038
            SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL
Sbjct: 181  SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 240

Query: 1039 CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGASXX 1218
            CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGAS  
Sbjct: 241  CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGASRA 300

Query: 1219 XXXXXXXXXXXXXXLRHSRNPATRGLPSTASGRLRGTQEAAPPTPPHPYLTHGEHLSSAR 1398
                          LRHSRNPATRGLPSTASGRLRGTQE APPTP    LT   H ++  
Sbjct: 301  ADDAERERRDREERLRHSRNPATRGLPSTASGRLRGTQEVAPPTP----LTPTSHTANTS 356

Query: 1399 VRHGKRAESEYAAAPR 1446
             R     E E   + R
Sbjct: 357  PRPVSGMERERKVSMR 372



 Score = 99.4 bits (246), Expect(2) = 5e-23
 Identities = 48/49 (97%), Positives = 49/49 (100%)
 Frame = +2

Query: 1370 HTANTSPRPVSGMERERKVSMRLHRGAPVNISSSDLTGRQDTSRMSTSQ 1516
            HTANTSPRPVSGMERERKVSMRLHRGAPVN+SSSDLTGRQDTSRMSTSQ
Sbjct: 351  HTANTSPRPVSGMERERKVSMRLHRGAPVNVSSSDLTGRQDTSRMSTSQ 399



 Score = 28.9 bits (63), Expect(2) = 5e-23
 Identities = 13/16 (81%), Positives = 14/16 (87%)
 Frame = +3

Query: 1581 IAGRVAASGLQSAVHR 1628
            I GRVA+SGLQS VHR
Sbjct: 400  IPGRVASSGLQSVVHR 415


>ref|NP_082150.1| casein kinase I isoform delta isoform 2 [Mus musculus].
          Length = 409

 Score =  669 bits (1726), Expect = 0.0
 Identities = 335/376 (89%), Positives = 338/376 (89%)
 Frame = +1

Query: 319  MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQ 498
            MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQ
Sbjct: 1    MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQ 60

Query: 499  GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 678
            GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH
Sbjct: 61   GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 120

Query: 679  SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 858
            SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA
Sbjct: 121  SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 180

Query: 859  SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 1038
            SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL
Sbjct: 181  SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 240

Query: 1039 CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGASXX 1218
            CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGAS  
Sbjct: 241  CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGASRA 300

Query: 1219 XXXXXXXXXXXXXXLRHSRNPATRGLPSTASGRLRGTQEAAPPTPPHPYLTHGEHLSSAR 1398
                          LRHSRNPATRGLPSTASGRLRGTQE APPTP    LT   H ++  
Sbjct: 301  ADDAERERRDREERLRHSRNPATRGLPSTASGRLRGTQEVAPPTP----LTPTSHTANTS 356

Query: 1399 VRHGKRAESEYAAAPR 1446
             R     E E   + R
Sbjct: 357  PRPVSGMERERKVSMR 372



 Score =  122 bits (305), Expect = 2e-27
 Identities = 58/59 (98%), Positives = 59/59 (100%)
 Frame = +2

Query: 1370 HTANTSPRPVSGMERERKVSMRLHRGAPVNISSSDLTGRQDTSRMSTSQNSIPFEHHGK 1546
            HTANTSPRPVSGMERERKVSMRLHRGAPVN+SSSDLTGRQDTSRMSTSQNSIPFEHHGK
Sbjct: 351  HTANTSPRPVSGMERERKVSMRLHRGAPVNVSSSDLTGRQDTSRMSTSQNSIPFEHHGK 409


>ref|NP_666199.1| casein kinase I isoform alpha [Mus musculus].
          Length = 325

 Score =  473 bits (1216), Expect = e-133
 Identities = 223/293 (76%), Positives = 255/293 (87%)
 Frame = +1

Query: 322  ELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQG 501
            E  VG +Y+L RKIGSGSFGDIYL  +I  GEEVA+KLE  K +HPQL  ESK+YK++QG
Sbjct: 10   EFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKILQG 69

Query: 502  GVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 681
            GVGIP IRW G E DYNV+VM+LLGPSLEDLFNFCSR+F++KTVL+LADQMISRIEY+H+
Sbjct: 70   GVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYVHT 129

Query: 682  KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYAS 861
            KNFIHRD+KPDNFLMG+G+  N +++IDFGLAKKYRD RT QHIPYRE+KNLTGTARYAS
Sbjct: 130  KNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARYAS 189

Query: 862  INTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLC 1041
            IN HLGIEQSRRDD+ESLGYVLMYFN  SLPWQGLKAATK+QKYE+ISEKKMSTP+EVLC
Sbjct: 190  INAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATKKQKYEKISEKKMSTPVEVLC 249

Query: 1042 KGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLK 1200
            KG+P+EFA YLN+CR LRF++ PDY YLRQLFR LF      YDY FDW MLK
Sbjct: 250  KGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDWTMLK 302


>ref|NP_690022.2| casein kinase I isoform gamma-3 [Mus musculus].
          Length = 424

 Score =  363 bits (933), Expect = e-100
 Identities = 173/290 (59%), Positives = 226/290 (77%), Gaps = 2/290 (0%)
 Frame = +1

Query: 325  LRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGG 504
            L VG  +R+G+KIG G+FG++ LG ++   E VAIKLE +K++ PQLH+E + YK +  G
Sbjct: 37   LMVGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSG 96

Query: 505  VGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK 684
             GIP + + G  G YN MV+ELLGPSLEDLF+ C R FSLKTVL++A Q+ISR+EY+HSK
Sbjct: 97   DGIPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSK 156

Query: 685  NFIHRDVKPDNFLMGL--GKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 858
            N I+RDVKP+NFL+G    K   +++IIDFGLAK+Y D  T +HIPYRE+K+LTGTARY 
Sbjct: 157  NLIYRDVKPENFLIGRPGNKAQQVIHIIDFGLAKEYIDPETKKHIPYREHKSLTGTARYM 216

Query: 859  SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 1038
            SINTHLG EQSRRDDLE+LG++ MYF  GSLPWQGLKA T +++Y++I + K +TPIEVL
Sbjct: 217  SINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVL 276

Query: 1039 CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDW 1188
            C+ +P E ATYL + R L F +KPDY YLR+LF +LF R+G+ +DY +DW
Sbjct: 277  CENFPEEMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRKGYMFDYEYDW 326


>ref|NP_775277.2| casein kinase I isoform gamma-1 [Mus musculus].
          Length = 459

 Score =  360 bits (925), Expect = 3e-99
 Identities = 170/291 (58%), Positives = 227/291 (78%), Gaps = 3/291 (1%)
 Frame = +1

Query: 325  LRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMM-QG 501
            L VG  +R+G+KIG G+FG++ LG ++   E VAIKLE +K++ PQLH+E + YK +   
Sbjct: 38   LMVGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPIKSRAPQLHLEYRFYKQLGSA 97

Query: 502  GVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 681
            G G+P + + G  G YN MV+ELLGPSLEDLF+ C R F+LKTVL++A Q++SR+EY+HS
Sbjct: 98   GEGLPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFTLKTVLMIAIQLLSRMEYVHS 157

Query: 682  KNFIHRDVKPDNFLMGL--GKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARY 855
            KN I+RDVKP+NFL+G    KK ++++IIDFGLAK+Y D  T +HIPYRE+K+LTGTARY
Sbjct: 158  KNLIYRDVKPENFLIGRQGNKKEHVIHIIDFGLAKEYVDPETKKHIPYREHKSLTGTARY 217

Query: 856  ASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEV 1035
             SINTHLG EQSRRDDLE+LG++ MYF  GSLPWQGLKA T +++Y++I + K +TPIE 
Sbjct: 218  MSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRNTPIEA 277

Query: 1036 LCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDW 1188
            LC+ +P E ATYL + R L F +KPDY YLR LF +LF R+G+++DY +DW
Sbjct: 278  LCENFPEEMATYLRYVRRLDFFEKPDYEYLRTLFTDLFERKGYTFDYAYDW 328


>ref|NP_001153063.1| casein kinase I isoform gamma-2 isoform 2 [Mus musculus].
          Length = 415

 Score =  355 bits (912), Expect = 9e-98
 Identities = 167/290 (57%), Positives = 225/290 (77%), Gaps = 2/290 (0%)
 Frame = +1

Query: 325  LRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGG 504
            L VG  +R+G+KIG G+FG++ LG ++   E VAIKLE +K++ PQLH+E + YK +   
Sbjct: 40   LMVGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPIKSRAPQLHLEYRFYKQLSTT 99

Query: 505  VGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK 684
             G+P + + G  G YN MV+ELLGPSLEDLF+ C R F+LKTVL++A Q+I+R+EY+H+K
Sbjct: 100  EGVPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFTLKTVLMIAIQLITRMEYVHTK 159

Query: 685  NFIHRDVKPDNFLMGL--GKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 858
            + I+RDVKP+NFL+G    K+ + ++IIDFGLAK+Y D  T +HIPYRE+K+LTGTARY 
Sbjct: 160  SLIYRDVKPENFLVGRPGSKRQHSIHIIDFGLAKEYIDPETKKHIPYREHKSLTGTARYM 219

Query: 859  SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 1038
            SINTHLG EQSRRDDLE+LG++ MYF  GSLPWQGLKA T +++Y++I + K +TPIEVL
Sbjct: 220  SINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVL 279

Query: 1039 CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDW 1188
            C+ +P E ATYL + R L F +KPDY YLR+LF +LF R G+ +DY +DW
Sbjct: 280  CESFPEEMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRSGYVFDYEYDW 329


>ref|NP_598763.1| casein kinase I isoform gamma-2 isoform 1 [Mus musculus].
          Length = 442

 Score =  342 bits (876), Expect = 1e-93
 Identities = 167/317 (52%), Positives = 225/317 (70%), Gaps = 29/317 (9%)
 Frame = +1

Query: 325  LRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQG- 501
            L VG  +R+G+KIG G+FG++ LG ++   E VAIKLE +K++ PQLH+E + YK +   
Sbjct: 40   LMVGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPIKSRAPQLHLEYRFYKQLSTT 99

Query: 502  --------------------------GVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNF 603
                                        G+P + + G  G YN MV+ELLGPSLEDLF+ 
Sbjct: 100  GEADSGTGPALLGQQWLRTPSMDVSFAEGVPQVYYFGPCGKYNAMVLELLGPSLEDLFDL 159

Query: 604  CSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGL--GKKGNLVYIIDFGLA 777
            C R F+LKTVL++A Q+I+R+EY+H+K+ I+RDVKP+NFL+G    K+ + ++IIDFGLA
Sbjct: 160  CDRTFTLKTVLMIAIQLITRMEYVHTKSLIYRDVKPENFLVGRPGSKRQHSIHIIDFGLA 219

Query: 778  KKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPW 957
            K+Y D  T +HIPYRE+K+LTGTARY SINTHLG EQSRRDDLE+LG++ MYF  GSLPW
Sbjct: 220  KEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPW 279

Query: 958  QGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLF 1137
            QGLKA T +++Y++I + K +TPIEVLC+ +P E ATYL + R L F +KPDY YLR+LF
Sbjct: 280  QGLKADTLKERYQKIGDTKRATPIEVLCESFPEEMATYLRYVRRLDFFEKPDYDYLRKLF 339

Query: 1138 RNLFHRQGFSYDYVFDW 1188
             +LF R G+ +DY +DW
Sbjct: 340  TDLFDRSGYVFDYEYDW 356


>ref|NP_001156336.1| tau-tubulin kinase 1 [Mus musculus].
          Length = 1308

 Score =  180 bits (456), Expect = 7e-45
 Identities = 109/292 (37%), Positives = 155/292 (53%), Gaps = 6/292 (2%)
 Frame = +1

Query: 331  VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVG 510
            V +R+++ +KIG G FG+IY   D+   E VA+K+E  +     L +E  + K +QG   
Sbjct: 30   VKDRWKVLKKIGGGGFGEIYEAMDLLTRENVALKVESAQQPKQVLKMEVAVLKKLQGKDH 89

Query: 511  IPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSR-KFSLKTVLLLADQMISRIEYIHSKN 687
            +     CG    +N +VM+L G +L DL     R  F+L T L L  Q++  IE IHS  
Sbjct: 90   VCRFIGCGRNEKFNYVVMQLQGRNLADLRRSQPRGTFTLSTTLRLGKQILESIEAIHSVG 149

Query: 688  FIHRDVKPDNFLMG-LGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASI 864
            F+HRD+KP NF MG L       Y++DFGLA++Y +  T    P R      GT RYAS+
Sbjct: 150  FLHRDIKPSNFAMGRLPSTYRKCYMLDFGLARQYTNT-TGDVRPPRNVAGFRGTVRYASV 208

Query: 865  NTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATK----RQKYERISEKKMSTPIE 1032
            N H   E  R DDL SL Y+L+ F +G LPW+ +K   +    ++KYE            
Sbjct: 209  NAHKNREMGRHDDLWSLFYMLVEFAVGQLPWRKIKDKEQVGMIKEKYEH----------R 258

Query: 1033 VLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDW 1188
            +L K  PSEF  +L+   SL +  KPDY  +  +F N    +G + +  FDW
Sbjct: 259  MLLKHMPSEFHLFLDHIASLDYFTKPDYQLIMSVFENSMKERGIAENEAFDW 310


>ref|NP_001020028.1| tau-tubulin kinase 2 isoform 2 [Mus musculus].
          Length = 1243

 Score =  170 bits (431), Expect = 5e-42
 Identities = 106/288 (36%), Positives = 150/288 (52%), Gaps = 2/288 (0%)
 Frame = +1

Query: 331  VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVG 510
            V  R+++ RKIG G FG+IY   D+   E VA+K+E  +     L +E  + K +QG   
Sbjct: 17   VKERWKVLRKIGGGGFGEIYDALDMLTRENVALKVESAQQPKQVLKMEVAVLKKLQGKDH 76

Query: 511  IPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSR-KFSLKTVLLLADQMISRIEYIHSKN 687
            +     CG    +N +VM+L G +L DL    SR  F++ T L L  Q++  IE IHS  
Sbjct: 77   VCRFIGCGRNDRFNYVVMQLQGRNLADLRRSQSRGTFTISTTLRLGKQILESIESIHSVG 136

Query: 688  FIHRDVKPDNFLMG-LGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASI 864
            F+HRD+KP NF MG         +++DFGLA+++ ++      P R      GT RYASI
Sbjct: 137  FLHRDIKPSNFAMGRFPSTCRKCFMLDFGLARQFTNSCGDVR-PPRAVAGFRGTVRYASI 195

Query: 865  NTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCK 1044
            N H   E  R DDL SL Y+L+ F +G LPW+ +K        E++   K      ++ K
Sbjct: 196  NAHRNREMGRHDDLWSLFYMLVEFVVGQLPWRKIK------DKEQVGSIKERYDHRLMLK 249

Query: 1045 GYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDW 1188
              P EF+T+L+   SL +  KPDY  L  +F N     G      FDW
Sbjct: 250  HLPPEFSTFLDHISSLDYFTKPDYQLLTSVFDNSIKTFGVIESDPFDW 297


  Database: RefSeq49_MP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 15,617,559
  Number of sequences in database:  30,036
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 94,232,160
Number of extensions: 2568860
Number of successful extensions: 15575
Number of sequences better than 1.0e-05: 194
Number of HSP's gapped: 15097
Number of HSP's successfully gapped: 199
Length of query: 1031
Length of database: 15,617,559
Length adjustment: 111
Effective length of query: 920
Effective length of database: 12,283,563
Effective search space: 11300877960
Effective search space used: 11300877960
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-001132
         (3095 letters)

Database: RefSeq49_SP.fasta 
           24,897 sequences; 11,343,932 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_003355386.1| PREDICTED: casein kinase I isoform epsilon i...   605   0.0  
Alignment   gi|XP_003126072.1| PREDICTED: casein kinase I isoform epsilon i...   605   0.0  
Alignment   gi|XP_003357975.1| PREDICTED: hypothetical protein LOC100625051...   478   e-135
Alignment   gi|XP_003124136.1| PREDICTED: casein kinase I isoform alpha iso...   473   e-133
Alignment   gi|XP_003354399.1| PREDICTED: casein kinase I isoform alpha [Su...   457   e-128
Alignment   gi|XP_003123049.1| PREDICTED: casein kinase I isoform gamma-2 [...   334   2e-91
Alignment   gi|XP_001927058.3| PREDICTED: casein kinase I isoform gamma-1-l...   305   1e-82
Alignment   gi|XP_003123926.2| PREDICTED: casein kinase I isoform gamma-3-l...   291   1e-78
Alignment   gi|XP_001929339.2| PREDICTED: tau-tubulin kinase 1 [Sus scrofa].     180   5e-45
Alignment   gi|XP_003353431.1| PREDICTED: tau-tubulin kinase 2 [Sus scrofa].     169   9e-42

>ref|XP_003355386.1| PREDICTED: casein kinase I isoform epsilon isoform 2 [Sus scrofa].
          Length = 416

 Score =  605 bits (1560), Expect(2) = 0.0
 Identities = 302/352 (85%), Positives = 310/352 (88%), Gaps = 7/352 (1%)
 Frame = +1

Query: 319  MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQ 498
            MELRVGN+YRLGRKIGSGSFGDIYLG +IA+GEEVAIKLECVKTKHPQLHIESK YKMMQ
Sbjct: 1    MELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQ 60

Query: 499  GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 678
            GGVGIP+I+WCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH
Sbjct: 61   GGVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 120

Query: 679  SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 858
            SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA
Sbjct: 121  SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 180

Query: 859  SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 1038
            SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL
Sbjct: 181  SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 240

Query: 1039 CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGASXX 1218
            CKGYPSEF+TYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGA+  
Sbjct: 241  CKGYPSEFSTYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGAARN 300

Query: 1219 XXXXXXXXXXXXXXLR--HSRNPATRGLP-----STASGRLRGTQEAAPPTP 1353
                           R    R  ATR LP        + RLR   E    TP
Sbjct: 301  PEDVDRERREHEREERMGQLRGSATRALPPGPPTGATANRLRSAAEPVASTP 352



 Score = 89.7 bits (221), Expect(2) = 0.0
 Identities = 41/56 (73%), Positives = 49/56 (87%)
 Frame = +2

Query: 1379 NTSPRPVSGMERERKVSMRLHRGAPVNISSSDLTGRQDTSRMSTSQNSIPFEHHGK 1546
            NTSPR +S ++RERKVSMRLHRGAP N+SSSDLTGRQ+ SR+S SQ S+PF+H GK
Sbjct: 361  NTSPRAISRVDRERKVSMRLHRGAPANVSSSDLTGRQEVSRISASQTSVPFDHLGK 416


>ref|XP_003126072.1| PREDICTED: casein kinase I isoform epsilon isoform 1 [Sus scrofa].
          Length = 416

 Score =  605 bits (1560), Expect(2) = 0.0
 Identities = 302/352 (85%), Positives = 310/352 (88%), Gaps = 7/352 (1%)
 Frame = +1

Query: 319  MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQ 498
            MELRVGN+YRLGRKIGSGSFGDIYLG +IA+GEEVAIKLECVKTKHPQLHIESK YKMMQ
Sbjct: 1    MELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQ 60

Query: 499  GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 678
            GGVGIP+I+WCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH
Sbjct: 61   GGVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 120

Query: 679  SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 858
            SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA
Sbjct: 121  SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 180

Query: 859  SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 1038
            SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL
Sbjct: 181  SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 240

Query: 1039 CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGASXX 1218
            CKGYPSEF+TYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGA+  
Sbjct: 241  CKGYPSEFSTYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGAARN 300

Query: 1219 XXXXXXXXXXXXXXLR--HSRNPATRGLP-----STASGRLRGTQEAAPPTP 1353
                           R    R  ATR LP        + RLR   E    TP
Sbjct: 301  PEDVDRERREHEREERMGQLRGSATRALPPGPPTGATANRLRSAAEPVASTP 352



 Score = 89.7 bits (221), Expect(2) = 0.0
 Identities = 41/56 (73%), Positives = 49/56 (87%)
 Frame = +2

Query: 1379 NTSPRPVSGMERERKVSMRLHRGAPVNISSSDLTGRQDTSRMSTSQNSIPFEHHGK 1546
            NTSPR +S ++RERKVSMRLHRGAP N+SSSDLTGRQ+ SR+S SQ S+PF+H GK
Sbjct: 361  NTSPRAISRVDRERKVSMRLHRGAPANVSSSDLTGRQEVSRISASQTSVPFDHLGK 416


>ref|XP_003357975.1| PREDICTED: hypothetical protein LOC100625051 [Sus scrofa].
          Length = 620

 Score =  478 bits (1230), Expect = e-135
 Identities = 233/236 (98%), Positives = 234/236 (99%)
 Frame = +1

Query: 505  VGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK 684
            VGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK
Sbjct: 36   VGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK 95

Query: 685  NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASI 864
            NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASI
Sbjct: 96   NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASI 155

Query: 865  NTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCK 1044
            NTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEK+MSTPIEVLCK
Sbjct: 156  NTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKEMSTPIEVLCK 215

Query: 1045 GYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGAS 1212
              PSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGAS
Sbjct: 216  -LPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGAS 270



 Score = 50.1 bits (118), Expect = 8e-06
 Identities = 24/43 (55%), Positives = 24/43 (55%)
 Frame = +1

Query: 2293 ACSQWTRWALESSEXXXXXXXXXXXXXXXXXXXHGEEEAEPGD 2421
            ACSQWTRWALESSE                   HGEEEAEPGD
Sbjct: 549  ACSQWTRWALESSERLDSAGDSAGAAGASRLSSHGEEEAEPGD 591


>ref|XP_003124136.1| PREDICTED: casein kinase I isoform alpha isoform 1 [Sus scrofa].
          Length = 337

 Score =  473 bits (1216), Expect = e-133
 Identities = 223/293 (76%), Positives = 255/293 (87%)
 Frame = +1

Query: 322  ELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQG 501
            E  VG +Y+L RKIGSGSFGDIYL  +I  GEEVA+KLE  K +HPQL  ESK+YK++QG
Sbjct: 10   EFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKILQG 69

Query: 502  GVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 681
            GVGIP IRW G E DYNV+VM+LLGPSLEDLFNFCSR+F++KTVL+LADQMISRIEY+H+
Sbjct: 70   GVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYVHT 129

Query: 682  KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYAS 861
            KNFIHRD+KPDNFLMG+G+  N +++IDFGLAKKYRD RT QHIPYRE+KNLTGTARYAS
Sbjct: 130  KNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARYAS 189

Query: 862  INTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLC 1041
            IN HLGIEQSRRDD+ESLGYVLMYFN  SLPWQGLKAATK+QKYE+ISEKKMSTP+EVLC
Sbjct: 190  INAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATKKQKYEKISEKKMSTPVEVLC 249

Query: 1042 KGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLK 1200
            KG+P+EFA YLN+CR LRF++ PDY YLRQLFR LF      YDY FDW MLK
Sbjct: 250  KGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDWTMLK 302


>ref|XP_003354399.1| PREDICTED: casein kinase I isoform alpha [Sus scrofa].
          Length = 364

 Score =  457 bits (1177), Expect = e-128
 Identities = 223/321 (69%), Positives = 255/321 (79%), Gaps = 28/321 (8%)
 Frame = +1

Query: 322  ELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQG 501
            E  VG +Y+L RKIGSGSFGDIYL  +I  GEEVA+KLE  K +HPQL  ESK+YK++QG
Sbjct: 10   EFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKILQG 69

Query: 502  GVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 681
            GVGIP IRW G E DYNV+VM+LLGPSLEDLFNFCSR+F++KTVL+LADQMISRIEY+H+
Sbjct: 70   GVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYVHT 129

Query: 682  KNFIHRDVKPDNFLMGLGKKGNL----------------------------VYIIDFGLA 777
            KNFIHRD+KPDNFLMG+G+  N                             +++IDFGLA
Sbjct: 130  KNFIHRDIKPDNFLMGIGRHCNKCLESPVGKRKRSMTVSTSQDPSFSGLNQLFLIDFGLA 189

Query: 778  KKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPW 957
            KKYRD RT QHIPYRE+KNLTGTARYASIN HLGIEQSRRDD+ESLGYVLMYFN  SLPW
Sbjct: 190  KKYRDNRTRQHIPYREDKNLTGTARYASINAHLGIEQSRRDDMESLGYVLMYFNRTSLPW 249

Query: 958  QGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLF 1137
            QGLKAATK+QKYE+ISEKKMSTP+EVLCKG+P+EFA YLN+CR LRF++ PDY YLRQLF
Sbjct: 250  QGLKAATKKQKYEKISEKKMSTPVEVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLF 309

Query: 1138 RNLFHRQGFSYDYVFDWNMLK 1200
            R LF      YDY FDW MLK
Sbjct: 310  RILFRTLNHQYDYTFDWTMLK 330


>ref|XP_003123049.1| PREDICTED: casein kinase I isoform gamma-2 [Sus scrofa].
          Length = 409

 Score =  334 bits (857), Expect = 2e-91
 Identities = 159/290 (54%), Positives = 217/290 (74%), Gaps = 2/290 (0%)
 Frame = +1

Query: 325  LRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGG 504
            L VG  +R+G+KIG G+FG++ LG ++   E VAIKLE +K++ PQLH+E + YK +   
Sbjct: 39   LMVGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPIKSRAPQLHLEYRFYKQLSAA 98

Query: 505  VGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK 684
             G+P + + G  G YN MV+ELLGPSLEDLF+ C R F+LKTVL++A Q+I+R+EY+H+K
Sbjct: 99   EGVPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFTLKTVLMIAIQLITRMEYVHTK 158

Query: 685  NFIHRDVKPDNFLMGL--GKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 858
            + I+RDVKP+NFL+G    K+ + ++IIDFGLAK+Y D  T +HIPYRE+K+LTGTARY 
Sbjct: 159  SLIYRDVKPENFLVGRPGTKRQHAIHIIDFGLAKEYIDPETKKHIPYREHKSLTGTARYM 218

Query: 859  SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 1038
            SINTHLG     + +L + G + MYF  GSLPWQGLKA T +++Y++I + K +TPIEVL
Sbjct: 219  SINTHLG-----KGELHAXGPMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVL 273

Query: 1039 CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDW 1188
            C+ +P E ATYL + R L F +KPDY YLR+LF +LF R GF +DY +DW
Sbjct: 274  CESFPEEMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRSGFVFDYEYDW 323


>ref|XP_001927058.3| PREDICTED: casein kinase I isoform gamma-1-like [Sus scrofa].
          Length = 494

 Score =  305 bits (780), Expect = 1e-82
 Identities = 141/229 (61%), Positives = 184/229 (80%), Gaps = 2/229 (0%)
 Frame = +1

Query: 508  GIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKN 687
            G+P + + G  G YN MV+ELLGPSLEDLF+ C R F+LKTVL++A Q++SR+EY+HSKN
Sbjct: 128  GLPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFTLKTVLMIAIQLLSRMEYVHSKN 187

Query: 688  FIHRDVKPDNFLMGL--GKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYAS 861
             I+RDVKP+NFL+G    KK ++++IIDFGLAK+Y D  T +HIPYRE+K+LTGTARY S
Sbjct: 188  LIYRDVKPENFLIGRQGNKKEHVIHIIDFGLAKEYIDPETKKHIPYREHKSLTGTARYMS 247

Query: 862  INTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLC 1041
            INTHLG EQSRRDDLE+LG++ MYF  GSLPWQGLKA T +++Y++I + K +TPIE LC
Sbjct: 248  INTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRNTPIEALC 307

Query: 1042 KGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDW 1188
            + +P E ATYL + R L F +KPDY YLR LF +LF R+G+++DY +DW
Sbjct: 308  ENFPEEMATYLRYVRRLDFFEKPDYEYLRTLFTDLFERKGYAFDYAYDW 356


>ref|XP_003123926.2| PREDICTED: casein kinase I isoform gamma-3-like [Sus scrofa].
          Length = 311

 Score =  291 bits (745), Expect = 1e-78
 Identities = 137/213 (64%), Positives = 174/213 (81%), Gaps = 2/213 (0%)
 Frame = +1

Query: 556  MVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGL- 732
            MV+ELLGPSLEDLF+ C R FSLKTVL++A Q+ISR+EY+HSKN I+RDVKP+NFL+G  
Sbjct: 1    MVLELLGPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRP 60

Query: 733  -GKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLE 909
              K   +++IIDFGLAK+Y D  T +HIPYRE+K+LTGTARY SINTHLG EQSRRDDLE
Sbjct: 61   GNKTQQVIHIIDFGLAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLE 120

Query: 910  SLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRS 1089
            +LG++ MYF  GSLPWQGLKA T +++Y++I + K +TPIEVLC+ +P E ATYL + R 
Sbjct: 121  ALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVLCENFPEEMATYLRYVRR 180

Query: 1090 LRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDW 1188
            L F +KPDY YLR+LF +LF R+G+ +DY +DW
Sbjct: 181  LDFFEKPDYDYLRKLFTDLFDRKGYMFDYEYDW 213


>ref|XP_001929339.2| PREDICTED: tau-tubulin kinase 1 [Sus scrofa].
          Length = 1305

 Score =  180 bits (456), Expect = 5e-45
 Identities = 109/292 (37%), Positives = 155/292 (53%), Gaps = 6/292 (2%)
 Frame = +1

Query: 331  VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVG 510
            V +R+++ +KIG G FG+IY   D+   E VA+K+E  +     L +E  + K +QG   
Sbjct: 30   VKDRWKVLKKIGGGGFGEIYEAMDLLTRENVALKVESAQQPKQVLKMEVAVLKKLQGKDH 89

Query: 511  IPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSR-KFSLKTVLLLADQMISRIEYIHSKN 687
            +     CG    +N +VM+L G +L DL     R  F+L T L L  Q++  IE IHS  
Sbjct: 90   VCRFIGCGRNEKFNYVVMQLQGRNLADLRRSQPRGTFTLSTTLRLGKQILESIEAIHSVG 149

Query: 688  FIHRDVKPDNFLMG-LGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASI 864
            F+HRD+KP NF MG L       Y++DFGLA++Y +  T    P R      GT RYAS+
Sbjct: 150  FLHRDIKPSNFAMGRLPSTYRKCYMLDFGLARQYTNT-TGDVRPPRNVAGFRGTVRYASV 208

Query: 865  NTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATK----RQKYERISEKKMSTPIE 1032
            N H   E  R DDL SL Y+L+ F +G LPW+ +K   +    ++KYE            
Sbjct: 209  NAHKNREMGRHDDLWSLFYMLVEFAVGQLPWRKIKDKEQVGMIKEKYEH----------R 258

Query: 1033 VLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDW 1188
            +L K  PSEF  +L+   SL +  KPDY  +  +F N    +G + +  FDW
Sbjct: 259  MLLKHMPSEFHLFLDHIASLDYFTKPDYQLIMSVFENSMKERGIAENEAFDW 310


>ref|XP_003353431.1| PREDICTED: tau-tubulin kinase 2 [Sus scrofa].
          Length = 1243

 Score =  169 bits (428), Expect = 9e-42
 Identities = 106/288 (36%), Positives = 149/288 (51%), Gaps = 2/288 (0%)
 Frame = +1

Query: 331  VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVG 510
            V  R+++ RKIG G FG+IY   D+   E VA+K+E  +     L +E  + K +QG   
Sbjct: 17   VKERWKVLRKIGGGGFGEIYDALDMLTRENVALKVESAQQPKQVLKMEVAVLKKLQGKDH 76

Query: 511  IPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSR-KFSLKTVLLLADQMISRIEYIHSKN 687
            +     CG    +N +VM+L G +L DL    SR  F++ T L L  Q++  IE IHS  
Sbjct: 77   VCRFIGCGRNDRFNYVVMQLQGRNLADLRRSQSRGTFTISTTLRLGRQILESIESIHSVG 136

Query: 688  FIHRDVKPDNFLMG-LGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASI 864
            F+HRD+KP NF MG         Y++DFGLA+++ ++      P R      GT RYASI
Sbjct: 137  FLHRDIKPSNFAMGRFPSTCRKCYMLDFGLARQFTNSCGDVR-PPRAVAGFRGTVRYASI 195

Query: 865  NTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCK 1044
            N H   E  R DDL SL Y+L+ F +G LPW+ +K        E++   K      ++ K
Sbjct: 196  NAHRNREMGRHDDLWSLFYMLVEFVVGQLPWRKIK------DKEQVGSIKERYDHRLMLK 249

Query: 1045 GYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDW 1188
              P EF+ +L+   SL +  KPDY  L  +F N     G      FDW
Sbjct: 250  HLPPEFSIFLDHISSLDYFTKPDYQLLTSVFDNSIKTFGVIESDPFDW 297


  Database: RefSeq49_SP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 11,343,932
  Number of sequences in database:  24,897
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 71,463,868
Number of extensions: 2035045
Number of successful extensions: 13413
Number of sequences better than 1.0e-05: 109
Number of HSP's gapped: 13114
Number of HSP's successfully gapped: 113
Length of query: 1031
Length of database: 11,343,932
Length adjustment: 109
Effective length of query: 922
Effective length of database: 8,630,159
Effective search space: 7957006598
Effective search space used: 7957006598
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

BLASTN 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-001132
         (3095 letters)

Database: Sscrofa_10.2.fasta 
           4582 sequences; 2,808,509,378 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Sscrofa_Chr12                                                        1524   0.0  
Sscrofa_Chr05                                                         345   9e-92
Sscrofa_Chr02                                                          64   5e-07

>Sscrofa_Chr12 
||          Length = 63588571

 Score = 1524 bits (769), Expect = 0.0
 Identities = 807/820 (98%)
 Strand = Plus / Minus

                                                                          
Query: 2254   acctccctgaccctccctgccatccccgtggactgaagcgcctgctcacagtggacccgc 2313
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 970781 acctccctgaccctccctgccatccccgtggactgaagcgcctgctcacagtggacccgc 970722

                                                                          
Query: 2314   tgggcactcgagtcgtcagagcgattggacagtgccggcgacagcgcgggcgcagcaggt 2373
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 970721 tgggcactcgagtcgtcagagcgattggacagtgccggcgacagcgcgggcgcagcaggt 970662

                                                                          
Query: 2374   gcctcccgattgagcagccacggcgaggaggaagctgagcctggagacgtggggccctcc 2433
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 970661 gcctcccgattgagcagccacggcgaggaggaagctgagcctggagacgtggggccctcc 970602

                                                                          
Query: 2434   tgggggcggggtgcttgtttcagtggcgggtgcctccgcgcctttgcgtctgggaggttc 2493
              |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 970601 tgggggcggggtgcttgtttcagtggcgggtgcctccgcgccttcgcgtctgggaggttc 970542

                                                                          
Query: 2494   tctaaacagactgtcggcgttaatagcgcagactggtcttccgtccgtgttagcatccgg 2553
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 970541 tctaaacagactgtcggcgttaatagcgcagactggtcttccgtccgtgttagcatccgg 970482

                                                                          
Query: 2554   atgaatggccaagggctgtggcgtccgccccggatgccagctttgcccaggcccaggcag 2613
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 970481 atgaatggccaagggctgtggcgtccgccccggatgccagctttgcccaggcccaggcag 970422

                                                                          
Query: 2614   gccggcgcatccagggggatcggctctgaagtgccgcgaagcaggggactcttgacagcc 2673
              ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 970421 gccggcgcacccagggggatcggctctgaagtgccgcgaagcaggggactcttgacagcc 970362

                                                                          
Query: 2674   tgaccacccagcagggcgagggtctggacgggggtgggggcctgggcagccaggggcctg 2733
              |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 970361 tgaccacccagcagggcgagggtctggatgggggtgggggcctgggcagccaggggcctg 970302

                                                                          
Query: 2734   aaaggcgtccgtgtcctgagacaccctgactgccgagtggccggcccggagcacagccgt 2793
              |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 970301 aaaggcgtccgtgtcctgggacaccctgactgccgagtggccggcccggagcacagccgt 970242

                                                                          
Query: 2794   ttgcgtctttccgaatcccgagccggctgctccgtgtgttggggtgcgggcactcggccg 2853
              |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 970241 ttgcgtctttccgaatcccgagccggctgctccgtgtgttggggcgcgggcactcggccg 970182

                                                                          
Query: 2854   cgtgggctgagacccaggagggtcagcgcgagctgcccagtaccttgcgcagagggcgcc 2913
              ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 970181 cgtgggctgagacccaggagggtcagcgcgagctgcccagtgccttgcgcagagggcgcc 970122

                                                                          
Query: 2914   tgccttcccggggaagcattggcagctgcngccctcgccccgcgccgcggctgccacgtc 2973
              |||||||||||||| |||||||||||||| |||||||||||||||||||||||| |||||
Sbjct: 970121 tgccttcccggggaggcattggcagctgcggccctcgccccgcgccgcggctgcaacgtc 970062

                                                                          
Query: 2974   tgcatcgcctgtgtgccggccgccggtccctgcgctgcgcttctgttggatcactgtacc 3033
              |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 970061 tgcatcgcctgtgtgccggcggccggtccctgcgctgcgcttctgttggatcactgtacc 970002

                                                      
Query: 3034   cgtgtccaccctccgtgtaaaatataaactcctgaccact 3073
              |||||||||||||||||||||  |||||||| ||||||||
Sbjct: 970001 cgtgtccaccctccgtgtaaataataaactcgtgaccact 969962



 Score = 1229 bits (620), Expect = 0.0
 Identities = 620/620 (100%)
 Strand = Plus / Minus

                                                                          
Query: 1580   gattgccggtcgggtggctgccagcggtctccagtccgccgtgcaccggtgagagcgctc 1639
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 971455 gattgccggtcgggtggctgccagcggtctccagtccgccgtgcaccggtgagagcgctc 971396

                                                                          
Query: 1640   ctttggctgagggcagacatgcatggccgacctactctgttatagtgacacgccccggtc 1699
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 971395 ctttggctgagggcagacatgcatggccgacctactctgttatagtgacacgccccggtc 971336

                                                                          
Query: 1700   tagaaccgaaccgttaccaccgggagctctccaggccacccacccagcgacgcccacggg 1759
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 971335 tagaaccgaaccgttaccaccgggagctctccaggccacccacccagcgacgcccacggg 971276

                                                                          
Query: 1760   gaaacaaacacaaacccaaccggacagactgcacgcgctgccatcgccaggggctgcgcc 1819
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 971275 gaaacaaacacaaacccaaccggacagactgcacgcgctgccatcgccaggggctgcgcc 971216

                                                                          
Query: 1820   gaggccccgcgagctcggtggcagcggggctgggaagaagagagacgagcgcagagagaa 1879
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 971215 gaggccccgcgagctcggtggcagcggggctgggaagaagagagacgagcgcagagagaa 971156

                                                                          
Query: 1880   tcagactcccatccaagagcctcttggtccggtccctcgggtggcggcgcgcccgtgccc 1939
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 971155 tcagactcccatccaagagcctcttggtccggtccctcgggtggcggcgcgcccgtgccc 971096

                                                                          
Query: 1940   ctgccgagtctgccgtaaccaccgaccttctactcggctaagacagttttgtatcatttt 1999
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 971095 ctgccgagtctgccgtaaccaccgaccttctactcggctaagacagttttgtatcatttt 971036

                                                                          
Query: 2000   gctaaaaattattggcttaaatctgtgtaaagaaacctgtctttttattgtttctttcct 2059
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 971035 gctaaaaattattggcttaaatctgtgtaaagaaacctgtctttttattgtttctttcct 970976

                                                                          
Query: 2060   gtctgttttgctgtctgtaaagaaatccgaagcagacgctggcgtggagtctgggagggc 2119
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 970975 gtctgttttgctgtctgtaaagaaatccgaagcagacgctggcgtggagtctgggagggc 970916

                                                                          
Query: 2120   aggccgggcgcggaggagcccacggggcctcccggtctgtgtctcgtgctgtcttgtgcg 2179
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 970915 aggccgggcgcggaggagcccacggggcctcccggtctgtgtctcgtgctgtcttgtgcg 970856

                                  
Query: 2180   ggccgcttgggagcctggca 2199
              ||||||||||||||||||||
Sbjct: 970855 ggccgcttgggagcctggca 970836



 Score =  599 bits (302), Expect = e-168
 Identities = 315/318 (99%), Gaps = 1/318 (0%)
 Strand = Plus / Plus

                                                                          
Query: 1      cagcgcgatggcggcggctccttcaggcccctgaagggggatttaggcccgggagatccg 60
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 887680 cagcgcgatggcggcggctccttcaggcccctgaagggggatttaggcccgggagatccg 887739

                                                                          
Query: 61     agtccatccgcggcggggagagggcgaacggggttggcggaggccggagcaggggcggcg 120
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 887740 agtccatccgcggcggggagagggcgaacggggttggcggaggccggagcaggggcggcg 887799

                                                                          
Query: 121    gcgcccggactgtcccatccgccccgtattgaggcgctgggagcggcagggcggccggaa 180
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 887800 gcgcccggactgtcccatccgccccgtattgaggcgctgggagcggcagggcggccggaa 887859

                                                                          
Query: 181    agcgatggtgaaagcggggccgtgaggggggcggagccggcagccggacccgcagtagcg 240
              ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 887860 agcgatggtgaaagc-gggccgtgaggggggcggagccggcagccggacccgcagtagcg 887918

                                                                          
Query: 241    gcagcagcggcgccgcctccccgagctcagacccaggaagcggccgggagggcaggagcg 300
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 887919 gcagcagcggcgccgcctccccgagctcagacccaggaagcggccgggagggcaggagcg 887978

                                
Query: 301    agccgggccgccgccgcc 318
              ||||| | ||||||||||
Sbjct: 887979 agccgtgtcgccgccgcc 887996



 Score =  456 bits (230), Expect = e-125
 Identities = 230/230 (100%)
 Strand = Plus / Minus

                                                                          
Query: 654    gatcagccgcatcgagtacatccactcgaagaacttcatccaccgggacgtgaagccgga 713
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 977279 gatcagccgcatcgagtacatccactcgaagaacttcatccaccgggacgtgaagccgga 977220

                                                                          
Query: 714    caacttcctcatggggctgggcaagaagggcaacctggtgtacatcatcgacttcgggct 773
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 977219 caacttcctcatggggctgggcaagaagggcaacctggtgtacatcatcgacttcgggct 977160

                                                                          
Query: 774    ggccaagaagtaccgggacgcccgcacccaccagcacatcccctaccgcgagaacaagaa 833
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 977159 ggccaagaagtaccgggacgcccgcacccaccagcacatcccctaccgcgagaacaagaa 977100

                                                                
Query: 834    cctcaccggcaccgcgcgctacgcctccatcaacacgcacctcggcatcg 883
              ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 977099 cctcaccggcaccgcgcgctacgcctccatcaacacgcacctcggcatcg 977050



 Score =  311 bits (157), Expect = 1e-81
 Identities = 160/161 (99%)
 Strand = Plus / Minus

                                                                          
Query: 883    gaacaatctcggagggacgacctggaatctctgggctacgtgctcatgtacttcaacctg 942
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 976864 gaacaatctcggagggacgacctggaatctctgggctacgtgctcatgtacttcaacctg 976805

                                                                          
Query: 943    ggctcgctgccctggcagggcctgaaggcggccaccaagcgccagaagtacgagcgcatc 1002
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 976804 ggctcgctgccctggcagggcctgaaggcggccaccaagcgccagaagtacgagcgcatc 976745

                                                       
Query: 1003   agcgagaagaagatgtccacgcccatcgaggtgctctgcaa 1043
              ||||||||| |||||||||||||||||||||||||||||||
Sbjct: 976744 agcgagaaggagatgtccacgcccatcgaggtgctctgcaa 976704



 Score =  299 bits (151), Expect = 5e-78
 Identities = 151/151 (100%)
 Strand = Plus / Minus

                                                                          
Query: 504    agtgggcatccccaccatccggtggtgtggggccgagggcgactacaacgtcatggtcat 563
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 977841 agtgggcatccccaccatccggtggtgtggggccgagggcgactacaacgtcatggtcat 977782

                                                                          
Query: 564    ggagctgctggggcccagcctggaggacctcttcaacttctgctccaggaagttcagcct 623
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 977781 ggagctgctggggcccagcctggaggacctcttcaacttctgctccaggaagttcagcct 977722

                                             
Query: 624    caagaccgtcctgctgctcgctgaccagatg 654
              |||||||||||||||||||||||||||||||
Sbjct: 977721 caagaccgtcctgctgctcgctgaccagatg 977691



 Score =  297 bits (150), Expect = 2e-77
 Identities = 150/150 (100%)
 Strand = Plus / Minus

                                                                          
Query: 1055   ccgagttcgccacgtacctgaacttctgccgttccctgcgctttgatgacaagcctgact 1114
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 976099 ccgagttcgccacgtacctgaacttctgccgttccctgcgctttgatgacaagcctgact 976040

                                                                          
Query: 1115   actcgtacctgaggcagctcttcaggaacctgttccaccgccagggcttctcctacgact 1174
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 976039 actcgtacctgaggcagctcttcaggaacctgttccaccgccagggcttctcctacgact 975980

                                            
Query: 1175   acgtctttgactggaacatgctcaagtttg 1204
              ||||||||||||||||||||||||||||||
Sbjct: 975979 acgtctttgactggaacatgctcaagtttg 975950



 Score =  222 bits (112), Expect = 9e-55
 Identities = 112/112 (100%)
 Strand = Plus / Plus

                                                                          
Query: 394    ggtacggacattgctgcgggagaagaagttgccatcaagcttgaatgtgtcaaaactaag 453
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 894955 ggtacggacattgctgcgggagaagaagttgccatcaagcttgaatgtgtcaaaactaag 895014

                                                                  
Query: 454    caccctcagctccacatcgagagcaaaatctacaagatgatgcagggaggag 505
              ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 895015 caccctcagctccacatcgagagcaaaatctacaagatgatgcagggaggag 895066



 Score =  133 bits (67), Expect = 6e-28
 Identities = 67/67 (100%)
 Strand = Plus / Minus

                                                                          
Query: 1514   cagaatagcattcctttcgaacaccacggcaagtagctgcacggctcccgtcggaaggca 1573
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 972421 cagaatagcattcctttcgaacaccacggcaagtagctgcacggctcccgtcggaaggca 972362

                     
Query: 1574   gcgctgg 1580
              |||||||
Sbjct: 972361 gcgctgg 972355



 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 40/40 (100%)
 Strand = Plus / Minus

                                                      
Query: 1204   ggagccagccgggcagccgacgacgccgagcgggagcgcc 1243
              ||||||||||||||||||||||||||||||||||||||||
Sbjct: 974526 ggagccagccgggcagccgacgacgccgagcgggagcgcc 974487


>Sscrofa_Chr05 
||          Length = 111506441

 Score =  345 bits (174), Expect = 9e-92
 Identities = 216/230 (93%)
 Strand = Plus / Plus

                                                                           
Query: 654     gatcagccgcatcgagtacatccactcgaagaacttcatccaccgggacgtgaagccgga 713
               ||||||||||||||||||||||||||| ||||||||||||||||||||||| || || ||
Sbjct: 6893186 gatcagccgcatcgagtacatccactccaagaacttcatccaccgggacgtcaaacccga 6893245

                                                                           
Query: 714     caacttcctcatggggctgggcaagaagggcaacctggtgtacatcatcgacttcgggct 773
               ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 6893246 caacttcctcatgggactggggaagaagggcaacctggtgtacatcatcgacttcgggct 6893305

                                                                           
Query: 774     ggccaagaagtaccgggacgcccgcacccaccagcacatcccctaccgcgagaacaagaa 833
               |||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct: 6893306 ggccaagaagtaccgggacgcccgcacccaccagcacatcccctaccgggaaaacaagaa 6893365

                                                                 
Query: 834     cctcaccggcaccgcgcgctacgcctccatcaacacgcacctcggcatcg 883
               | | |||||||| || |||||||||||||||||||| ||||| |||||||
Sbjct: 6893366 cttgaccggcacggcccgctacgcctccatcaacacccacctgggcatcg 6893415



 Score =  236 bits (119), Expect = 6e-59
 Identities = 137/143 (95%)
 Strand = Plus / Plus

                                                                           
Query: 912     tctgggctacgtgctcatgtacttcaacctgggctcgctgccctggcagggcctgaaggc 971
               |||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||||
Sbjct: 6894076 tctgggttacgtgctcatgtacttcaacctgggctccctgccctggcagggcctcaaggc 6894135

                                                                           
Query: 972     ggccaccaagcgccagaagtacgagcgcatcagcgagaagaagatgtccacgcccatcga 1031
               ||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||
Sbjct: 6894136 ggccaccaagcgccagaagtatgagcgcatcagcgagaagaagatgtcgacgcccatcga 6894195

                                      
Query: 1032    ggtgctctgcaaaggctacccct 1054
               ||| |||||||||||||||||||
Sbjct: 6894196 ggtcctctgcaaaggctacccct 6894218



 Score =  157 bits (79), Expect = 4e-35
 Identities = 133/151 (88%)
 Strand = Plus / Plus

                                                                           
Query: 504     agtgggcatccccaccatccggtggtgtggggccgagggcgactacaacgtcatggtcat 563
               |||||| |||||  |||||  |||||| ||||||||||| ||||||||||| ||||||||
Sbjct: 6890394 agtgggaatcccgtccatcaagtggtgcggggccgagggtgactacaacgtgatggtcat 6890453

                                                                           
Query: 564     ggagctgctggggcccagcctggaggacctcttcaacttctgctccaggaagttcagcct 623
               |||| |||||||||||||||| |||||||||||||||||||||||| | ||||| |||||
Sbjct: 6890454 ggagttgctggggcccagcctcgaggacctcttcaacttctgctcccgaaagtttagcct 6890513

                                              
Query: 624     caagaccgtcctgctgctcgctgaccagatg 654
               |||||| || ||||| || || |||||||||
Sbjct: 6890514 caagacggtgctgctcctggcggaccagatg 6890544



 Score =  157 bits (79), Expect = 4e-35
 Identities = 118/131 (90%)
 Strand = Plus / Plus

                                                                           
Query: 1069    tacctgaacttctgccgttccctgcgctttgatgacaagcctgactactcgtacctgagg 1128
               ||||| |||||||||||||| ||||| || |||||||||||||||||||| |||||| | 
Sbjct: 6895569 tacctcaacttctgccgttcactgcggttcgatgacaagcctgactactcctacctgcgc 6895628

                                                                           
Query: 1129    cagctcttcaggaacctgttccaccgccagggcttctcctacgactacgtctttgactgg 1188
               ||||||||| | ||||| |||||||| |||||||||||||| ||||||||||| ||||||
Sbjct: 6895629 cagctcttccgcaacctcttccaccggcagggcttctcctatgactacgtcttcgactgg 6895688

                          
Query: 1189    aacatgctcaa 1199
               |||||||||||
Sbjct: 6895689 aacatgctcaa 6895699



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 80/91 (87%)
 Strand = Plus / Plus

                                                                           
Query: 415     gaagaagttgccatcaagcttgaatgtgtcaaaactaagcaccctcagctccacatcgag 474
               ||||||||||| |||||||| || ||||| || || |||||||| ||||| |||||||||
Sbjct: 6890171 gaagaagttgctatcaagctcgagtgtgtgaagacaaagcacccccagctgcacatcgag 6890230

                                              
Query: 475     agcaaaatctacaagatgatgcagggaggag 505
               |||||  ||||||||||||||||||| ||||
Sbjct: 6890231 agcaagttctacaagatgatgcaggggggag 6890261



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 64/73 (87%)
 Strand = Plus / Plus

                                                                           
Query: 317     ccatggagctcagagtggggaacaggtaccggctgggccggaagatcggcagcgggtcct 376
               ||||||||||  | |||||||||| |||||| ||||||||||||||||| ||||| ||||
Sbjct: 6880901 ccatggagcttcgtgtggggaacaagtaccgcctgggccggaagatcgggagcggatcct 6880960

                            
Query: 377     tcggagacatcta 389
               | ||||| |||||
Sbjct: 6880961 ttggagatatcta 6880973


>Sscrofa_Chr02 
||          Length = 162569375

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 50/56 (89%)
 Strand = Plus / Minus

                                                                        
Query: 547      tacaacgtcatggtcatggagctgctggggcccagcctggaggacctcttcaactt 602
                ||||||| ||||||  |||||||||| |||||||||||||||||||| ||| ||||
Sbjct: 77281803 tacaacgccatggtgctggagctgctcgggcccagcctggaggacctgttcgactt 77281748


  Database: Sscrofa_10.2.fasta
    Posted date:  Nov 16, 2011 10:34 AM
  Number of letters in database: 2,808,509,378
  Number of sequences in database:  4582
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 62,091,261
Number of extensions: 424
Number of successful extensions: 424
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 423
Number of HSP's successfully gapped: 17
Length of query: 3095
Length of database: 2,808,509,378
Length adjustment: 22
Effective length of query: 3073
Effective length of database: 2,808,408,574
Effective search space: 8630239547902
Effective search space used: 8630239547902
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)