Animal-Genome cDNA 20110601C-001194

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-001194
         (2964 letters)

Database: RefSeq49_BP.fasta 
           33,088 sequences; 17,681,374 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001070264.1| amyloid beta A4 protein [Bos taurus].             773   0.0  
Alignment   gi|XP_002699281.1| PREDICTED: amyloid beta (A4) precursor-like ...   434   e-121
Alignment   gi|XP_001251235.1| PREDICTED: amyloid beta (A4) precursor-like ...   434   e-121
Alignment   gi|NP_001033184.1| amyloid-like protein 1 [Bos taurus].              243   7e-64
Alignment   gi|NP_001039436.1| kunitz-type protease inhibitor 2 [Bos taurus].     69   3e-11
Alignment   gi|NP_001070530.1| eppin [Bos taurus].                                68   4e-11
Alignment   gi|NP_001001554.2| pancreatic trypsin inhibitor precursor [Bos ...    64   6e-10
Alignment   gi|NP_001039832.1| kunitz-type protease inhibitor 1 [Bos taurus].     62   2e-09
Alignment   gi|XP_002692379.1| PREDICTED: tissue factor pathway inhibitor-l...    62   2e-09
Alignment   gi|XP_002701177.1| PREDICTED: tissue factor pathway inhibitor-l...    62   2e-09

>ref|NP_001070264.1| amyloid beta A4 protein [Bos taurus].
          Length = 695

 Score =  773 bits (1997), Expect = 0.0
 Identities = 390/419 (93%), Positives = 395/419 (94%)
 Frame = +1

Query: 1204 TTQEHLPQDPVKLPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMR 1383
            TT     ++ V++PTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMR
Sbjct: 277  TTTTESVEEVVRVPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMR 336

Query: 1384 EWEEAERQAKNLPKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRL 1563
            EWEEAERQAKNLPKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRL
Sbjct: 337  EWEEAERQAKNLPKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRL 396

Query: 1564 ALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVM 1743
            ALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVM
Sbjct: 397  ALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVM 456

Query: 1744 THLRVIYERMNQSLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGND 1923
            THLRVIYERMNQSLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLAN+ISEPRISYGND
Sbjct: 457  THLRVIYERMNQSLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANIISEPRISYGND 516

Query: 1924 ALMPSLTETKTTVELLPVNGEFSLDDLQPWHPFGVDSVPANTENEVEPVDARPAADRGLT 2103
            ALMPSLTETKTTVELLPVNGEFSLDDLQPWHPFGVDSVPANTENEVEPVDARPAADRGLT
Sbjct: 517  ALMPSLTETKTTVELLPVNGEFSLDDLQPWHPFGVDSVPANTENEVEPVDARPAADRGLT 576

Query: 2104 TRPGSGLTNIKTEEISEVKMDAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLXXXXXX 2283
            TRPGSGLTNIKTEEISEVKMDAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGL      
Sbjct: 577  TRPGSGLTNIKTEEISEVKMDAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVV 636

Query: 2284 XXXXXXXXXXXXKKKQYTSIHHGVVEVDAAVTPEERHLSKMQQNGYENPTYKFFEQMQN 2460
                        KKKQYTSIHHGVVEVDAAVTPEERHLSKMQQNGYENPTYKFFEQMQN
Sbjct: 637  IATVIVITLVMLKKKQYTSIHHGVVEVDAAVTPEERHLSKMQQNGYENPTYKFFEQMQN 695



 Score =  437 bits (1123), Expect = e-122
 Identities = 211/268 (78%), Positives = 213/268 (79%)
 Frame = +1

Query: 151 MLPGLALVLLAAWTARALEVPTDGNAGLLAEPQVAMFCGKLNMHMNVQNGKWESDPSGTK 330
           MLP LALVLLAAWTARALEVPTDGNAGLLAEPQVAMFCGKLNMHMNVQNGKWESDPSGTK
Sbjct: 1   MLPALALVLLAAWTARALEVPTDGNAGLLAEPQVAMFCGKLNMHMNVQNGKWESDPSGTK 60

Query: 331 TCIGTKEGILQYCQEVYPELQITNVVEANQPVTIQNWCKRSRKQCKTHTHIVIPYRCLVG 510
           TCIGTKEGILQYCQEVYPELQITNVVEANQPVTIQNWCKR RKQCKTH H+VIPYRCLVG
Sbjct: 61  TCIGTKEGILQYCQEVYPELQITNVVEANQPVTIQNWCKRGRKQCKTHAHMVIPYRCLVG 120

Query: 511 EFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLHDYGMLLPCGIDKFR 690
           EFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLHDYGMLLPCGIDKFR
Sbjct: 121 EFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLHDYGMLLPCGIDKFR 180

Query: 691 GVEFVCCPLXXXXXXXXXXXXXXXXXXVWWGGADTDYADGSEDKVVXXXXXXXXXXXXXX 870
           GVEFVCCPL                  VWWGGADTDYADGSEDKV+              
Sbjct: 181 GVEFVCCPLAEESDNVDSADAEEDDSDVWWGGADTDYADGSEDKVIEVAEEEEVADVEEE 240

Query: 871 XXXXXXXXXXXXXXXXXXXXPYEEATER 954
                               PYEEATER
Sbjct: 241 EADDEEDDEDGEELEEEAEEPYEEATER 268


>ref|XP_002699281.1| PREDICTED: amyloid beta (A4) precursor-like protein 2 [Bos taurus].
          Length = 767

 Score =  434 bits (1115), Expect = e-121
 Identities = 244/498 (48%), Positives = 317/498 (63%), Gaps = 19/498 (3%)
 Frame = +1

Query: 1021 CSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGSVMSQSLL 1200
            CS++A TGPCRA++ RWYFD+++GKC  F YGGCGGNRNNF++E+YCMAVC +++     
Sbjct: 314  CSQEALTGPCRAVMPRWYFDLSKGKCVRFIYGGCGGNRNNFESEDYCMAVCKAMIP---- 369

Query: 1201 KTTQEHLPQDPVKLPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVM 1380
                      P  LPT      + VD Y ET  D+NEHA FQKAKE+LE +HR RM +V 
Sbjct: 370  ----------PTPLPT------NDVDVYFETSADDNEHARFQKAKEQLEIRHRNRMDRVK 413

Query: 1381 REWEEAERQAKNLPKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRR 1560
            +EWEEAE QAKNLPKA+++ +IQHFQ  V++LE+EAA+E+QQLVETH+ARVEAMLNDRRR
Sbjct: 414  KEWEEAELQAKNLPKAERQTLIQHFQAMVKALEKEAASEKQQLVETHLARVEAMLNDRRR 473

Query: 1561 LALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQV 1740
            +ALENY+ ALQ+ PPRP  +   L++YVRAE KDR HTL+H++HV  VDP+KAAQ+RSQV
Sbjct: 474  VALENYLAALQSDPPRPHRILQALRRYVRAENKDRLHTLRHYQHVLAVDPEKAAQMRSQV 533

Query: 1741 MTHLRVIYERMNQSLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGN 1920
            MTHL VI ER NQSLSLLY VP VA+EIQ+E+DELLQ+++       A+M          
Sbjct: 534  MTHLHVIEERRNQSLSLLYKVPYVAQEIQEEIDELLQEQR-------ADM---------- 576

Query: 1921 DALMPSLTETKTTVELLPVNGEFSLDDLQPWHPFGVDSVPANTENE-VEPVDARPAADRG 2097
            D    S +ET   V    V+ E S D++ P+H   +   P+  ENE  +P    P     
Sbjct: 577  DQFSSSFSETPVDVR---VSSEES-DEIPPFH--SLHPFPSLPENEDSQPELFHPMKKGS 630

Query: 2098 LTTRPGSGLTNIKTEEI-SEVKMDAEFRHDSGYEVHHQKLVFFAEDVGS----------- 2241
                   GL   + + I S+ K+D     D   +V  ++++F AE VG            
Sbjct: 631  ALGEQDGGLIGAEEKVINSKKKVDENMVIDETLDV--KEMIFNAERVGGLEEEPESVGPL 688

Query: 2242 ------NKGAIIGLXXXXXXXXXXXXXXXXXXKKKQYTSIHHGVVEVDAAVTPEERHLSK 2403
                  +  A+IGL                  +++QY SI HG+VEVD  +TPEERHLSK
Sbjct: 689  REDFSLSSSALIGLLVVAVAIATIIVISLVMLRRRQYGSISHGIVEVDPMLTPEERHLSK 748

Query: 2404 MQQNGYENPTYKFFEQMQ 2457
            MQ +GYENPTYK+ EQMQ
Sbjct: 749  MQNHGYENPTYKYLEQMQ 766



 Score =  265 bits (676), Expect = 2e-70
 Identities = 120/201 (59%), Positives = 152/201 (75%), Gaps = 2/201 (0%)
 Frame = +1

Query: 118 SSALGAPRRVAMLPGLALVLLAAWTARALEV--PTDGNAGLLAEPQVAMFCGKLNMHMNV 291
           ++A  A  ++ +L  L L   AA  A  +E    + G    +AEPQ+AMFCGKLNMH+N+
Sbjct: 6   TAATAATGKLLVLLLLGLTAPAAALAGYIEALAASAGTGFAVAEPQIAMFCGKLNMHVNI 65

Query: 292 QNGKWESDPSGTKTCIGTKEGILQYCQEVYPELQITNVVEANQPVTIQNWCKRSRKQCKT 471
           Q G+WE DPSGT++C GTKE +LQYCQE+YPELQITNV+EANQPV++ NWC+R +KQCK 
Sbjct: 66  QTGRWEPDPSGTQSCFGTKEEVLQYCQEMYPELQITNVMEANQPVSVDNWCRRDKKQCK- 124

Query: 472 HTHIVIPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLHD 651
            +HIVIP++CLVGEFVSD LLVP+KC F H+ERM+VCE H  WHTV KE C  +   L+ 
Sbjct: 125 -SHIVIPFKCLVGEFVSDVLLVPEKCLFFHKERMEVCENHQRWHTVVKEACLTQEMTLYS 183

Query: 652 YGMLLPCGIDKFRGVEFVCCP 714
           Y MLLPCG+D+F G E+VCCP
Sbjct: 184 YSMLLPCGVDQFHGTEYVCCP 204


>ref|XP_001251235.1| PREDICTED: amyloid beta (A4) precursor-like protein 2 [Bos taurus].
          Length = 767

 Score =  434 bits (1115), Expect = e-121
 Identities = 244/498 (48%), Positives = 317/498 (63%), Gaps = 19/498 (3%)
 Frame = +1

Query: 1021 CSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGSVMSQSLL 1200
            CS++A TGPCRA++ RWYFD+++GKC  F YGGCGGNRNNF++E+YCMAVC +++     
Sbjct: 314  CSQEALTGPCRAVMPRWYFDLSKGKCVRFIYGGCGGNRNNFESEDYCMAVCKAMIP---- 369

Query: 1201 KTTQEHLPQDPVKLPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVM 1380
                      P  LPT      + VD Y ET  D+NEHA FQKAKE+LE +HR RM +V 
Sbjct: 370  ----------PTPLPT------NDVDVYFETSADDNEHARFQKAKEQLEIRHRNRMDRVK 413

Query: 1381 REWEEAERQAKNLPKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRR 1560
            +EWEEAE QAKNLPKA+++ +IQHFQ  V++LE+EAA+E+QQLVETH+ARVEAMLNDRRR
Sbjct: 414  KEWEEAELQAKNLPKAERQTLIQHFQAMVKALEKEAASEKQQLVETHLARVEAMLNDRRR 473

Query: 1561 LALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQV 1740
            +ALENY+ ALQ+ PPRP  +   L++YVRAE KDR HTL+H++HV  VDP+KAAQ+RSQV
Sbjct: 474  VALENYLAALQSDPPRPHRILQALRRYVRAENKDRLHTLRHYQHVLAVDPEKAAQMRSQV 533

Query: 1741 MTHLRVIYERMNQSLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGN 1920
            MTHL VI ER NQSLSLLY VP VA+EIQ+E+DELLQ+++       A+M          
Sbjct: 534  MTHLHVIEERRNQSLSLLYKVPYVAQEIQEEIDELLQEQR-------ADM---------- 576

Query: 1921 DALMPSLTETKTTVELLPVNGEFSLDDLQPWHPFGVDSVPANTENE-VEPVDARPAADRG 2097
            D    S +ET   V    V+ E S D++ P+H   +   P+  ENE  +P    P     
Sbjct: 577  DQFSSSFSETPVDVR---VSSEES-DEIPPFH--SLHPFPSLPENEDSQPELFHPMKKGS 630

Query: 2098 LTTRPGSGLTNIKTEEI-SEVKMDAEFRHDSGYEVHHQKLVFFAEDVGS----------- 2241
                   GL   + + I S+ K+D     D   +V  ++++F AE VG            
Sbjct: 631  ALGEQDGGLIGAEEKVINSKKKVDENMVIDETLDV--KEMIFNAERVGGLEEEPESVGPL 688

Query: 2242 ------NKGAIIGLXXXXXXXXXXXXXXXXXXKKKQYTSIHHGVVEVDAAVTPEERHLSK 2403
                  +  A+IGL                  +++QY SI HG+VEVD  +TPEERHLSK
Sbjct: 689  REDFSLSSSALIGLLVVAVAIATIIVISLVMLRRRQYGSISHGIVEVDPMLTPEERHLSK 748

Query: 2404 MQQNGYENPTYKFFEQMQ 2457
            MQ +GYENPTYK+ EQMQ
Sbjct: 749  MQNHGYENPTYKYLEQMQ 766



 Score =  265 bits (676), Expect = 2e-70
 Identities = 120/201 (59%), Positives = 152/201 (75%), Gaps = 2/201 (0%)
 Frame = +1

Query: 118 SSALGAPRRVAMLPGLALVLLAAWTARALEV--PTDGNAGLLAEPQVAMFCGKLNMHMNV 291
           ++A  A  ++ +L  L L   AA  A  +E    + G    +AEPQ+AMFCGKLNMH+N+
Sbjct: 6   TAATAATGKLLVLLLLGLTAPAAALAGYIEALAASAGTGFAVAEPQIAMFCGKLNMHVNI 65

Query: 292 QNGKWESDPSGTKTCIGTKEGILQYCQEVYPELQITNVVEANQPVTIQNWCKRSRKQCKT 471
           Q G+WE DPSGT++C GTKE +LQYCQE+YPELQITNV+EANQPV++ NWC+R +KQCK 
Sbjct: 66  QTGRWEPDPSGTQSCFGTKEEVLQYCQEMYPELQITNVMEANQPVSVDNWCRRDKKQCK- 124

Query: 472 HTHIVIPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLHD 651
            +HIVIP++CLVGEFVSD LLVP+KC F H+ERM+VCE H  WHTV KE C  +   L+ 
Sbjct: 125 -SHIVIPFKCLVGEFVSDVLLVPEKCLFFHKERMEVCENHQRWHTVVKEACLTQEMTLYS 183

Query: 652 YGMLLPCGIDKFRGVEFVCCP 714
           Y MLLPCG+D+F G E+VCCP
Sbjct: 184 YSMLLPCGVDQFHGTEYVCCP 204


>ref|NP_001033184.1| amyloid-like protein 1 [Bos taurus].
          Length = 642

 Score =  243 bits (620), Expect = 7e-64
 Identities = 151/401 (37%), Positives = 218/401 (54%), Gaps = 6/401 (1%)
 Frame = +1

Query: 1267 DAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQAKNLPKADKKAVI 1446
            D VD Y   PG+ +EH  F +AK  LE +   ++++VMREW  A+ Q+KNLPKAD++A+ 
Sbjct: 287  DGVDVYFGMPGEISEHEGFLRAKMDLEERRMRQINEVMREWAMADNQSKNLPKADRQALN 346

Query: 1447 QHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRLALENYITALQAVPPRPRHVFN 1626
            +HFQ  +++LE++ + ERQ+LVETH  RV A++ND+RR ALE ++ ALQ  PP+P  V  
Sbjct: 347  EHFQSILQTLEEQVSGERQRLVETHATRVIALINDQRRAALEGFLAALQGDPPQPERVLL 406

Query: 1627 MLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYERMNQSLSLLYNVP 1806
             L++Y+RAEQK+++HTL+H++HV  VDP+KA Q+R QV THL+VI ERMNQSL LL   P
Sbjct: 407  ALRRYLRAEQKEQRHTLRHYQHVAAVDPEKAQQMRFQVQTHLQVIEERMNQSLGLLDQNP 466

Query: 1807 AVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGNDALMPSLTETKTTVELLPVNGE 1986
             +A+E++ ++ ELL  E                       L P+  E        P +G 
Sbjct: 467  RLAQELRPQIQELLHSEH----------------------LGPNELEA-------PASGG 497

Query: 1987 FSLD--DLQPWHPFGVDSVPANTENEVEPVDARPAADRGLTTRPGSGLTNIKTEEISEVK 2160
             S D   LQP  P G   +    E +                   SG   +   E  E K
Sbjct: 498  SSEDKSGLQPLDPKGDTPMALPKEQDA----------------TSSGKDKMTPLEQYERK 541

Query: 2161 MDAEFRHDSGYEVHH---QKLVFFAEDVGSNKGAIIG-LXXXXXXXXXXXXXXXXXXKKK 2328
            ++       G+  H    Q+        G ++ A+ G L                  +KK
Sbjct: 542  VNMSI--PRGFPFHSSEIQRDELAPAGTGVSREAVSGLLIMGAGGGSLIVLSLLLLRRKK 599

Query: 2329 QYTSIHHGVVEVDAAVTPEERHLSKMQQNGYENPTYKFFEQ 2451
             Y +I HGVVEVD  +T EE+ L ++Q++GYENPTY+F E+
Sbjct: 600  PYGAISHGVVEVDPMLTLEEQQLRELQRHGYENPTYRFLEE 640



 Score =  177 bits (448), Expect = 6e-44
 Identities = 86/202 (42%), Positives = 122/202 (60%), Gaps = 1/202 (0%)
 Frame = +1

Query: 112 ANSSALGAPRRVAMLPGLALVLLAAWTARALEVPTDGNAGLLAEPQVAMFCGKLNMHMNV 291
           A+ +  G    + +LP L L+L        L   +   A      QVA  CG+  +H ++
Sbjct: 4   ASPATRGLGPLLRLLPLLMLLLRMQLAEGNLAGGSPSAAEAPGSAQVAGLCGRPTLHRDL 63

Query: 292 QNGKWESDPSGTKTCIGTKEGILQYCQEVYPELQITNVVEANQPVTIQNWCKRSRK-QCK 468
           + G+WE DP  ++ C+   + +L+YC+++YPELQI  V +A Q + ++ WC  +R   C 
Sbjct: 64  RTGRWEPDPQLSRRCLRDPQRVLEYCRQMYPELQIARVEQATQAIPMEQWCGGTRGGHCA 123

Query: 469 THTHIVIPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLH 648
              H V+P+ CL GEFVS+ALLVP+ C+FLHQERMD CE+       A+E CS +   LH
Sbjct: 124 HPHHQVVPFHCLPGEFVSEALLVPEGCRFLHQERMDQCESSARRQQEAQEACSSQGLILH 183

Query: 649 DYGMLLPCGIDKFRGVEFVCCP 714
             GMLLPCG D+FRGVE+VCCP
Sbjct: 184 GSGMLLPCGADRFRGVEYVCCP 205


>ref|NP_001039436.1| kunitz-type protease inhibitor 2 [Bos taurus].
          Length = 250

 Score = 68.6 bits (166), Expect = 3e-11
 Identities = 27/51 (52%), Positives = 33/51 (64%)
 Frame = +1

Query: 1021 CSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVC 1173
            C  +A TGPCRA   RWYF+  E  C  F YGGC GN+NN+ ++E CM  C
Sbjct: 131  CIAKAVTGPCRAAFPRWYFNAEENSCDNFIYGGCRGNKNNYRSKEECMQQC 181



 Score = 65.5 bits (158), Expect = 3e-10
 Identities = 27/75 (36%), Positives = 41/75 (54%)
 Frame = +1

Query: 1021 CSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGSVMSQSLL 1200
            C    + G CRA   RW+++VT+G C  F YGGC  N NN+ T+E C+A C  V   ++ 
Sbjct: 38   CHLPKKVGRCRASFPRWWYNVTDGSCQQFVYGGCDRNDNNYMTKEECLAKCAGVTENTID 97

Query: 1201 KTTQEHLPQDPVKLP 1245
            + T++        +P
Sbjct: 98   ERTRDKADSSVPSVP 112


>ref|NP_001070530.1| eppin [Bos taurus].
          Length = 134

 Score = 68.2 bits (165), Expect = 4e-11
 Identities = 26/58 (44%), Positives = 34/58 (58%)
 Frame = +1

Query: 1021 CSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGSVMSQS 1194
            CS   E GPC A+  RW++D T   C+ F YGGC GN NNF ++  C + C +  S S
Sbjct: 77   CSMPKEAGPCMALFHRWWYDKTNNSCSSFIYGGCRGNNNNFQSQAVCQSACSAKGSNS 134


>ref|NP_001001554.2| pancreatic trypsin inhibitor precursor [Bos taurus].
          Length = 100

 Score = 64.3 bits (155), Expect = 6e-10
 Identities = 25/55 (45%), Positives = 33/55 (60%)
 Frame = +1

Query: 1021 CSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGSVM 1185
            C E   TGPC+A + R++++   G C PF YGGC   RNNF + E CM  CG  +
Sbjct: 40   CLEPPYTGPCKARMIRYFYNAKAGLCQPFVYGGCRAKRNNFKSSEDCMRTCGGAI 94


>ref|NP_001039832.1| kunitz-type protease inhibitor 1 [Bos taurus].
          Length = 513

 Score = 62.4 bits (150), Expect = 2e-09
 Identities = 27/75 (36%), Positives = 39/75 (52%)
 Frame = +1

Query: 1021 CSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGSVMSQSLL 1200
            C +  +TG C   I RWY++     CA F YGGC GN+NNF+ EE C+  C  +  + + 
Sbjct: 369  CVDMPDTGLCSESIPRWYYNPFTEHCARFTYGGCYGNKNNFEEEEQCLESCRGISKKDVF 428

Query: 1201 KTTQEHLPQDPVKLP 1245
               +E    +   LP
Sbjct: 429  GLRRESPVPNTGSLP 443



 Score = 61.2 bits (147), Expect = 5e-09
 Identities = 26/58 (44%), Positives = 31/58 (53%)
 Frame = +1

Query: 1021 CSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGSVMSQS 1194
            C    + G CR    RWY+D TE  C  F YGGC GN+NN+  EE C   C +V   S
Sbjct: 244  CLASRKVGRCRGSFPRWYYDPTEQICKSFVYGGCLGNKNNYLREEECKLACRNVQGPS 301


>ref|XP_002692379.1| PREDICTED: tissue factor pathway inhibitor-like [Bos taurus].
          Length = 158

 Score = 62.4 bits (150), Expect = 2e-09
 Identities = 23/51 (45%), Positives = 32/51 (62%)
 Frame = +1

Query: 1021 CSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVC 1173
            C      GPC+A + R++++ T   C PF YGGC GN NNF+T E C+ +C
Sbjct: 44   CQLPQARGPCKAALLRYFYNSTSNACEPFTYGGCQGNDNNFETTEMCLRIC 94


>ref|XP_002701177.1| PREDICTED: tissue factor pathway inhibitor-like [Bos taurus].
          Length = 158

 Score = 62.4 bits (150), Expect = 2e-09
 Identities = 23/51 (45%), Positives = 32/51 (62%)
 Frame = +1

Query: 1021 CSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVC 1173
            C      GPC+A + R++++ T   C PF YGGC GN NNF+T E C+ +C
Sbjct: 44   CQLPQARGPCKAALLRYFYNSTSNACEPFTYGGCQGNDNNFETTEMCLRIC 94


  Database: RefSeq49_BP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 17,681,374
  Number of sequences in database:  33,088
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 109,436,652
Number of extensions: 3055313
Number of successful extensions: 11766
Number of sequences better than 1.0e-05: 43
Number of HSP's gapped: 11640
Number of HSP's successfully gapped: 61
Length of query: 988
Length of database: 17,681,374
Length adjustment: 112
Effective length of query: 876
Effective length of database: 13,975,518
Effective search space: 12242553768
Effective search space used: 12242553768
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-001194
         (2964 letters)

Database: RefSeq49_CP.fasta 
           33,336 sequences; 18,874,504 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001006601.1| amyloid beta A4 protein [Canis lupus familia...  1335   0.0  
Alignment   gi|XP_856325.1| PREDICTED: similar to Amyloid-like protein 2 pr...   454   e-127
Alignment   gi|XP_856203.1| PREDICTED: similar to Amyloid-like protein 2 pr...   448   e-125
Alignment   gi|XP_856735.1| PREDICTED: similar to Amyloid-like protein 2 pr...   446   e-125
Alignment   gi|XP_856408.1| PREDICTED: similar to Amyloid-like protein 2 pr...   445   e-124
Alignment   gi|XP_856494.1| PREDICTED: similar to Amyloid-like protein 2 pr...   443   e-124
Alignment   gi|XP_856283.1| PREDICTED: similar to Amyloid-like protein 2 pr...   443   e-124
Alignment   gi|XP_856246.1| PREDICTED: similar to Amyloid-like protein 2 pr...   442   e-123
Alignment   gi|XP_856859.1| PREDICTED: similar to Amyloid-like protein 2 pr...   437   e-122
Alignment   gi|XP_856781.1| PREDICTED: similar to Amyloid-like protein 2 pr...   437   e-122

>ref|NP_001006601.1| amyloid beta A4 protein [Canis lupus familiaris].
          Length = 770

 Score = 1335 bits (3455), Expect = 0.0
 Identities = 665/770 (86%), Positives = 669/770 (86%)
 Frame = +1

Query: 151  MLPGLALVLLAAWTARALEVPTDGNAGLLAEPQVAMFCGKLNMHMNVQNGKWESDPSGTK 330
            MLP LALVLLA+WTARALEVPTDGNAGLLAEPQVAM CGKL MHMNVQNGKWESDP GTK
Sbjct: 1    MLPALALVLLASWTARALEVPTDGNAGLLAEPQVAMLCGKLRMHMNVQNGKWESDPLGTK 60

Query: 331  TCIGTKEGILQYCQEVYPELQITNVVEANQPVTIQNWCKRSRKQCKTHTHIVIPYRCLVG 510
            TCIG+KE ILQYCQEVYPELQITNVVEANQPVTIQNWCK+ RKQCKTH HIVIPYRCLVG
Sbjct: 61   TCIGSKEDILQYCQEVYPELQITNVVEANQPVTIQNWCKKGRKQCKTHAHIVIPYRCLVG 120

Query: 511  EFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLHDYGMLLPCGIDKFR 690
            EFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLHDYGMLLPCGIDKFR
Sbjct: 121  EFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLHDYGMLLPCGIDKFR 180

Query: 691  GVEFVCCPLXXXXXXXXXXXXXXXXXXVWWGGADTDYADGSEDKVVXXXXXXXXXXXXXX 870
            GVEFVCCPL                  VWWGGADTDYADGSEDKVV              
Sbjct: 181  GVEFVCCPLAEESDNIDSADAEEDDSDVWWGGADTDYADGSEDKVVEVAEEEEVADVEEE 240

Query: 871  XXXXXXXXXXXXXXXXXXXXPYEEATERXXXXXXXXXXXXXXXXXXXXXXCSEQAETGPC 1050
                                PYEEATER                      CSEQAETGPC
Sbjct: 241  EAEDDEDDEDGDEVEEEAEEPYEEATERTTSIATTTTTTTESVEEVVREVCSEQAETGPC 300

Query: 1051 RAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGSVMSQSLLKTTQEHLPQD 1230
            RAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGSVMSQSLLKTTQE LPQD
Sbjct: 301  RAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGSVMSQSLLKTTQEPLPQD 360

Query: 1231 PVKLPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQA 1410
             VKLPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQA
Sbjct: 361  AVKLPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQA 420

Query: 1411 KNLPKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRLALENYITAL 1590
            KNLPKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRLALENYITAL
Sbjct: 421  KNLPKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRLALENYITAL 480

Query: 1591 QAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYER 1770
            QAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYER
Sbjct: 481  QAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYER 540

Query: 1771 MNQSLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGNDALMPSLTET 1950
            MNQSLSLLYNVPAVAEEIQDEVDELLQKEQNYSDD+LANMISEPRISYGNDALMPSLTET
Sbjct: 541  MNQSLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDILANMISEPRISYGNDALMPSLTET 600

Query: 1951 KTTVELLPVNGEFSLDDLQPWHPFGVDSVPANTENEVEPVDARPAADRGLTTRPGSGLTN 2130
            KTTVELLPVNGEFSLDDLQPWHPFGVDSVPANTENEVEPVDARPAADRGLTTRPGSGLTN
Sbjct: 601  KTTVELLPVNGEFSLDDLQPWHPFGVDSVPANTENEVEPVDARPAADRGLTTRPGSGLTN 660

Query: 2131 IKTEEISEVKMDAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLXXXXXXXXXXXXXXX 2310
            IKTEEISEVKMDAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGL               
Sbjct: 661  IKTEEISEVKMDAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIATVIVITL 720

Query: 2311 XXXKKKQYTSIHHGVVEVDAAVTPEERHLSKMQQNGYENPTYKFFEQMQN 2460
               KKKQYTSIHHGVVEVDAAVTPEERHLSKMQQNGYENPTYKFFEQMQN
Sbjct: 721  VMLKKKQYTSIHHGVVEVDAAVTPEERHLSKMQQNGYENPTYKFFEQMQN 770


>ref|XP_856325.1| PREDICTED: similar to Amyloid-like protein 2 precursor (Amyloid
            protein homolog) (APPH) (CDEI-box binding protein)
            (CDEBP) isoform 13 [Canis familiaris].
          Length = 785

 Score =  454 bits (1168), Expect = e-127
 Identities = 250/496 (50%), Positives = 327/496 (65%), Gaps = 17/496 (3%)
 Frame = +1

Query: 1021 CSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGSVMSQSLL 1200
            CS++A TGPCRA++ RWYFD+++GKC  F YGGCGGNRNNF++E+YCMAVC ++  QSLL
Sbjct: 314  CSQEAMTGPCRAVMPRWYFDLSKGKCVRFIYGGCGGNRNNFESEDYCMAVCKTMSKQSLL 373

Query: 1201 KTTQEHLPQDPVKLPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVM 1380
             T QE L    V +P T   T D VD Y ET  D+NEHA FQKAKE+LE +HR RM +V 
Sbjct: 374  STAQEPLLSF-VSVPPTPLPTND-VDVYFETSADDNEHARFQKAKEQLEIRHRNRMDRVK 431

Query: 1381 REWEEAERQAKNLPKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRR 1560
            +EWEEAE QAKNLPKA+++ +IQHFQ  V++LE+EAA+E+QQLVETH+ARVEAMLNDRRR
Sbjct: 432  KEWEEAELQAKNLPKAERQTLIQHFQAMVKALEKEAASEKQQLVETHLARVEAMLNDRRR 491

Query: 1561 LALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQV 1740
            +ALENY+ ALQ+ PPRP  +   L++YVRAE KDR HT++H++HV  VDP+KAAQ++SQV
Sbjct: 492  MALENYLAALQSDPPRPHRILQALRRYVRAENKDRLHTIRHYQHVLAVDPEKAAQMKSQV 551

Query: 1741 MTHLRVIYERMNQSLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGN 1920
            MTHL VI ER NQSLSLLY VP VA+EIQ+E+DELLQ+++       A+M          
Sbjct: 552  MTHLHVIEERRNQSLSLLYKVPYVAQEIQEEIDELLQEQR-------ADM---------- 594

Query: 1921 DALMPSLTETKTTVELLPVNGEFSLDDLQPWHPF-GVDSVPANTENEVE---PVDARPAA 2088
            D    S++ET   V    V+ E S D++ P+HPF    S+P N + + E   P+     A
Sbjct: 595  DQFTASISETPVDVR---VSSEES-DEIPPFHPFHPFPSLPENEDTQRELYHPMKKGSGA 650

Query: 2089 ---DRGL----------TTRPGSGLTNIKTEEISEVKMDAEFRHDSGYEVHHQKLVFFAE 2229
               D GL            +    +   +T ++ E+  +AE     G E   + +    E
Sbjct: 651  GEQDGGLIGAEEKVINSKNKVDENMVIDETLDVKEMIFNAE--RVGGLEAEPESVGPLRE 708

Query: 2230 DVGSNKGAIIGLXXXXXXXXXXXXXXXXXXKKKQYTSIHHGVVEVDAAVTPEERHLSKMQ 2409
            D   +  A+IGL                  +K+QY +I HG+VEVD  +TPEERHL+KMQ
Sbjct: 709  DFSLSSSALIGLLVIAVAIATVIVISLVMLRKRQYGTISHGIVEVDPMLTPEERHLNKMQ 768

Query: 2410 QNGYENPTYKFFEQMQ 2457
             +GYENPTYK+ EQMQ
Sbjct: 769  NHGYENPTYKYLEQMQ 784



 Score =  267 bits (682), Expect = 5e-71
 Identities = 121/202 (59%), Positives = 155/202 (76%), Gaps = 3/202 (1%)
 Frame = +1

Query: 118 SSALGAPRRVAMLPGLALVLLAAWTARALEVPTDGNAGL---LAEPQVAMFCGKLNMHMN 288
           ++A  A  ++ +L  L L   AA  A  +E     NAG    +AEPQ+A+FCGKLNMH+N
Sbjct: 6   TAAASATGKLLVLLLLGLTAPAAALAGYIEALA-ANAGTGFAVAEPQIAVFCGKLNMHVN 64

Query: 289 VQNGKWESDPSGTKTCIGTKEGILQYCQEVYPELQITNVVEANQPVTIQNWCKRSRKQCK 468
           +Q GKWE DP+GTK C GTKE +LQYCQE+YPELQITNV+EAN+PV++ NWC+R +KQCK
Sbjct: 65  IQTGKWEPDPTGTKKCFGTKEEVLQYCQEMYPELQITNVMEANEPVSVDNWCRRDKKQCK 124

Query: 469 THTHIVIPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLH 648
             TH+V+P++CLVGEFVSD LLVP+KC+F H+E+M+VCE H HWHTV KE C  +   L+
Sbjct: 125 --THVVVPFKCLVGEFVSDVLLVPEKCQFSHKEQMEVCENHQHWHTVVKEACLAQGMTLY 182

Query: 649 DYGMLLPCGIDKFRGVEFVCCP 714
            YGMLLPCG+D+F G E+VCCP
Sbjct: 183 RYGMLLPCGVDRFHGTEYVCCP 204


>ref|XP_856203.1| PREDICTED: similar to Amyloid-like protein 2 precursor (Amyloid
            protein homolog) (APPH) (CDEI-box binding protein)
            (CDEBP) isoform 10 [Canis familiaris].
          Length = 789

 Score =  448 bits (1153), Expect = e-125
 Identities = 247/500 (49%), Positives = 327/500 (65%), Gaps = 21/500 (4%)
 Frame = +1

Query: 1021 CSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGSVMSQSLL 1200
            CS++A TGPCRA++ RWYFD+++GKC  F YGGCGGNRNNF++E+YCMAVC   MS+S  
Sbjct: 314  CSQEAMTGPCRAVMPRWYFDLSKGKCVRFIYGGCGGNRNNFESEDYCMAVC-KTMSKSRR 372

Query: 1201 KTTQEHLPQDP----VKLPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERM 1368
            +   +  P++P    V +P T   T D VD Y ET  D+NEHA FQKAKE+LE +HR RM
Sbjct: 373  RPAWQRCPREPLLSFVSVPPTPLPTND-VDVYFETSADDNEHARFQKAKEQLEIRHRNRM 431

Query: 1369 SQVMREWEEAERQAKNLPKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLN 1548
             +V +EWEEAE QAKNLPKA+++ +IQHFQ  V++LE+EAA+E+QQLVETH+ARVEAMLN
Sbjct: 432  DRVKKEWEEAELQAKNLPKAERQTLIQHFQAMVKALEKEAASEKQQLVETHLARVEAMLN 491

Query: 1549 DRRRLALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQI 1728
            DRRR+ALENY+ ALQ+ PPRP  +   L++YVRAE KDR HT++H++HV  VDP+KAAQ+
Sbjct: 492  DRRRMALENYLAALQSDPPRPHRILQALRRYVRAENKDRLHTIRHYQHVLAVDPEKAAQM 551

Query: 1729 RSQVMTHLRVIYERMNQSLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRI 1908
            +SQVMTHL VI ER NQSLSLLY VP VA+EIQ+E+DELLQ+++       A+M      
Sbjct: 552  KSQVMTHLHVIEERRNQSLSLLYKVPYVAQEIQEEIDELLQEQR-------ADM------ 598

Query: 1909 SYGNDALMPSLTETKTTVELLPVNGEFSLDDLQPWHPF-GVDSVPANTENEVE---PVDA 2076
                D    S++ET   V    V+ E S D++ P+HPF    S+P N + + E   P+  
Sbjct: 599  ----DQFTASISETPVDVR---VSSEES-DEIPPFHPFHPFPSLPENEDTQRELYHPMKK 650

Query: 2077 RPAA---DRGL----------TTRPGSGLTNIKTEEISEVKMDAEFRHDSGYEVHHQKLV 2217
               A   D GL            +    +   +T ++ E+  +AE     G E   + + 
Sbjct: 651  GSGAGEQDGGLIGAEEKVINSKNKVDENMVIDETLDVKEMIFNAE--RVGGLEAEPESVG 708

Query: 2218 FFAEDVGSNKGAIIGLXXXXXXXXXXXXXXXXXXKKKQYTSIHHGVVEVDAAVTPEERHL 2397
               ED   +  A+IGL                  +K+QY +I HG+VEVD  +TPEERHL
Sbjct: 709  PLREDFSLSSSALIGLLVIAVAIATVIVISLVMLRKRQYGTISHGIVEVDPMLTPEERHL 768

Query: 2398 SKMQQNGYENPTYKFFEQMQ 2457
            +KMQ +GYENPTYK+ EQMQ
Sbjct: 769  NKMQNHGYENPTYKYLEQMQ 788



 Score =  267 bits (682), Expect = 5e-71
 Identities = 121/202 (59%), Positives = 155/202 (76%), Gaps = 3/202 (1%)
 Frame = +1

Query: 118 SSALGAPRRVAMLPGLALVLLAAWTARALEVPTDGNAGL---LAEPQVAMFCGKLNMHMN 288
           ++A  A  ++ +L  L L   AA  A  +E     NAG    +AEPQ+A+FCGKLNMH+N
Sbjct: 6   TAAASATGKLLVLLLLGLTAPAAALAGYIEALA-ANAGTGFAVAEPQIAVFCGKLNMHVN 64

Query: 289 VQNGKWESDPSGTKTCIGTKEGILQYCQEVYPELQITNVVEANQPVTIQNWCKRSRKQCK 468
           +Q GKWE DP+GTK C GTKE +LQYCQE+YPELQITNV+EAN+PV++ NWC+R +KQCK
Sbjct: 65  IQTGKWEPDPTGTKKCFGTKEEVLQYCQEMYPELQITNVMEANEPVSVDNWCRRDKKQCK 124

Query: 469 THTHIVIPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLH 648
             TH+V+P++CLVGEFVSD LLVP+KC+F H+E+M+VCE H HWHTV KE C  +   L+
Sbjct: 125 --THVVVPFKCLVGEFVSDVLLVPEKCQFSHKEQMEVCENHQHWHTVVKEACLAQGMTLY 182

Query: 649 DYGMLLPCGIDKFRGVEFVCCP 714
            YGMLLPCG+D+F G E+VCCP
Sbjct: 183 RYGMLLPCGVDRFHGTEYVCCP 204


>ref|XP_856735.1| PREDICTED: similar to Amyloid-like protein 2 precursor (Amyloid
            protein homolog) (APPH) (CDEI-box binding protein)
            (CDEBP) isoform 23 [Canis familiaris].
          Length = 770

 Score =  446 bits (1146), Expect = e-125
 Identities = 244/484 (50%), Positives = 317/484 (65%), Gaps = 5/484 (1%)
 Frame = +1

Query: 1021 CSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGSVMSQSLL 1200
            CS++A TGPCRA++ RWYFD+++GKC  F YGGCGGNRNNF++E+YCMAVC   MS+S  
Sbjct: 314  CSQEAMTGPCRAVMPRWYFDLSKGKCVRFIYGGCGGNRNNFESEDYCMAVC-KTMSKSRR 372

Query: 1201 KTTQEHLPQDPVKLPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVM 1380
            +   +  P   V LP T   T D VD Y ET  D+NEHA FQKAKE+LE +HR RM +V 
Sbjct: 373  RPAWQRCP---VGLPPTPLPTND-VDVYFETSADDNEHARFQKAKEQLEIRHRNRMDRVK 428

Query: 1381 REWEEAERQAKNLPKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRR 1560
            +EWEEAE QAKNLPKA+++ +IQHFQ  V++LE+EAA+E+QQLVETH+ARVEAMLNDRRR
Sbjct: 429  KEWEEAELQAKNLPKAERQTLIQHFQAMVKALEKEAASEKQQLVETHLARVEAMLNDRRR 488

Query: 1561 LALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQV 1740
            +ALENY+ ALQ+ PPRP  +   L++YVRAE KDR HT++H++HV  VDP+KAAQ++SQV
Sbjct: 489  MALENYLAALQSDPPRPHRILQALRRYVRAENKDRLHTIRHYQHVLAVDPEKAAQMKSQV 548

Query: 1741 MTHLRVIYERMNQSLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGN 1920
            MTHL VI ER NQSLSLLY VP VA+EIQ+E+DELLQ+++       A+M          
Sbjct: 549  MTHLHVIEERRNQSLSLLYKVPYVAQEIQEEIDELLQEQR-------ADM---------- 591

Query: 1921 DALMPSLTETKTTVELLPVNGEFSLDDLQPWHPFGVDSVPANTENEVEPVDARP----AA 2088
            D    S++ET   V    V+ E S D++ P+HPF     P+  ENE      +      A
Sbjct: 592  DQFTASISETPVDVR---VSSEES-DEIPPFHPF--HPFPSLPENEGSGAGEQDGGLIGA 645

Query: 2089 DRGLTTRPGSGLTNIKTEEISEVK-MDAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGL 2265
            +  +         N+  +E  +VK M        G E   + +    ED   +  A+IGL
Sbjct: 646  EEKVINSKNKVDENMVIDETLDVKEMIFNAERVGGLEAEPESVGPLREDFSLSSSALIGL 705

Query: 2266 XXXXXXXXXXXXXXXXXXKKKQYTSIHHGVVEVDAAVTPEERHLSKMQQNGYENPTYKFF 2445
                              +K+QY +I HG+VEVD  +TPEERHL+KMQ +GYENPTYK+ 
Sbjct: 706  LVIAVAIATVIVISLVMLRKRQYGTISHGIVEVDPMLTPEERHLNKMQNHGYENPTYKYL 765

Query: 2446 EQMQ 2457
            EQMQ
Sbjct: 766  EQMQ 769



 Score =  267 bits (682), Expect = 5e-71
 Identities = 121/202 (59%), Positives = 155/202 (76%), Gaps = 3/202 (1%)
 Frame = +1

Query: 118 SSALGAPRRVAMLPGLALVLLAAWTARALEVPTDGNAGL---LAEPQVAMFCGKLNMHMN 288
           ++A  A  ++ +L  L L   AA  A  +E     NAG    +AEPQ+A+FCGKLNMH+N
Sbjct: 6   TAAASATGKLLVLLLLGLTAPAAALAGYIEALA-ANAGTGFAVAEPQIAVFCGKLNMHVN 64

Query: 289 VQNGKWESDPSGTKTCIGTKEGILQYCQEVYPELQITNVVEANQPVTIQNWCKRSRKQCK 468
           +Q GKWE DP+GTK C GTKE +LQYCQE+YPELQITNV+EAN+PV++ NWC+R +KQCK
Sbjct: 65  IQTGKWEPDPTGTKKCFGTKEEVLQYCQEMYPELQITNVMEANEPVSVDNWCRRDKKQCK 124

Query: 469 THTHIVIPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLH 648
             TH+V+P++CLVGEFVSD LLVP+KC+F H+E+M+VCE H HWHTV KE C  +   L+
Sbjct: 125 --THVVVPFKCLVGEFVSDVLLVPEKCQFSHKEQMEVCENHQHWHTVVKEACLAQGMTLY 182

Query: 649 DYGMLLPCGIDKFRGVEFVCCP 714
            YGMLLPCG+D+F G E+VCCP
Sbjct: 183 RYGMLLPCGVDRFHGTEYVCCP 204


>ref|XP_856408.1| PREDICTED: similar to Amyloid-like protein 2 precursor (Amyloid
            protein homolog) (APPH) (CDEI-box binding protein)
            (CDEBP) isoform 15 [Canis familiaris].
          Length = 782

 Score =  445 bits (1145), Expect = e-124
 Identities = 247/496 (49%), Positives = 324/496 (65%), Gaps = 17/496 (3%)
 Frame = +1

Query: 1021 CSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGSVMSQSLL 1200
            CS++A TGPCRA++ RWYFD+++GKC  F YGGCGGNRNNF++E+YCMAVC   MS+S  
Sbjct: 314  CSQEAMTGPCRAVMPRWYFDLSKGKCVRFIYGGCGGNRNNFESEDYCMAVC-KTMSKSRR 372

Query: 1201 KTTQEHLPQDPVKLPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVM 1380
            +   +  P   V LP T   T D VD Y ET  D+NEHA FQKAKE+LE +HR RM +V 
Sbjct: 373  RPAWQRCP---VGLPPTPLPTND-VDVYFETSADDNEHARFQKAKEQLEIRHRNRMDRVK 428

Query: 1381 REWEEAERQAKNLPKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRR 1560
            +EWEEAE QAKNLPKA+++ +IQHFQ  V++LE+EAA+E+QQLVETH+ARVEAMLNDRRR
Sbjct: 429  KEWEEAELQAKNLPKAERQTLIQHFQAMVKALEKEAASEKQQLVETHLARVEAMLNDRRR 488

Query: 1561 LALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQV 1740
            +ALENY+ ALQ+ PPRP  +   L++YVRAE KDR HT++H++HV  VDP+KAAQ++SQV
Sbjct: 489  MALENYLAALQSDPPRPHRILQALRRYVRAENKDRLHTIRHYQHVLAVDPEKAAQMKSQV 548

Query: 1741 MTHLRVIYERMNQSLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGN 1920
            MTHL VI ER NQSLSLLY VP VA+EIQ+E+DELLQ+++       A+M          
Sbjct: 549  MTHLHVIEERRNQSLSLLYKVPYVAQEIQEEIDELLQEQR-------ADM---------- 591

Query: 1921 DALMPSLTETKTTVELLPVNGEFSLDDLQPWHPF-GVDSVPANTENEVE---PVDARPAA 2088
            D    S++ET   V    V+ E S D++ P+HPF    S+P N + + E   P+     A
Sbjct: 592  DQFTASISETPVDVR---VSSEES-DEIPPFHPFHPFPSLPENEDTQRELYHPMKKGSGA 647

Query: 2089 ---DRGL----------TTRPGSGLTNIKTEEISEVKMDAEFRHDSGYEVHHQKLVFFAE 2229
               D GL            +    +   +T ++ E+  +AE     G E   + +    E
Sbjct: 648  GEQDGGLIGAEEKVINSKNKVDENMVIDETLDVKEMIFNAE--RVGGLEAEPESVGPLRE 705

Query: 2230 DVGSNKGAIIGLXXXXXXXXXXXXXXXXXXKKKQYTSIHHGVVEVDAAVTPEERHLSKMQ 2409
            D   +  A+IGL                  +K+QY +I HG+VEVD  +TPEERHL+KMQ
Sbjct: 706  DFSLSSSALIGLLVIAVAIATVIVISLVMLRKRQYGTISHGIVEVDPMLTPEERHLNKMQ 765

Query: 2410 QNGYENPTYKFFEQMQ 2457
             +GYENPTYK+ EQMQ
Sbjct: 766  NHGYENPTYKYLEQMQ 781



 Score =  267 bits (682), Expect = 5e-71
 Identities = 121/202 (59%), Positives = 155/202 (76%), Gaps = 3/202 (1%)
 Frame = +1

Query: 118 SSALGAPRRVAMLPGLALVLLAAWTARALEVPTDGNAGL---LAEPQVAMFCGKLNMHMN 288
           ++A  A  ++ +L  L L   AA  A  +E     NAG    +AEPQ+A+FCGKLNMH+N
Sbjct: 6   TAAASATGKLLVLLLLGLTAPAAALAGYIEALA-ANAGTGFAVAEPQIAVFCGKLNMHVN 64

Query: 289 VQNGKWESDPSGTKTCIGTKEGILQYCQEVYPELQITNVVEANQPVTIQNWCKRSRKQCK 468
           +Q GKWE DP+GTK C GTKE +LQYCQE+YPELQITNV+EAN+PV++ NWC+R +KQCK
Sbjct: 65  IQTGKWEPDPTGTKKCFGTKEEVLQYCQEMYPELQITNVMEANEPVSVDNWCRRDKKQCK 124

Query: 469 THTHIVIPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLH 648
             TH+V+P++CLVGEFVSD LLVP+KC+F H+E+M+VCE H HWHTV KE C  +   L+
Sbjct: 125 --THVVVPFKCLVGEFVSDVLLVPEKCQFSHKEQMEVCENHQHWHTVVKEACLAQGMTLY 182

Query: 649 DYGMLLPCGIDKFRGVEFVCCP 714
            YGMLLPCG+D+F G E+VCCP
Sbjct: 183 RYGMLLPCGVDRFHGTEYVCCP 204


>ref|XP_856494.1| PREDICTED: similar to Amyloid-like protein 2 precursor (Amyloid
            protein homolog) (APPH) (CDEI-box binding protein)
            (CDEBP) isoform 17 [Canis familiaris].
          Length = 773

 Score =  443 bits (1139), Expect = e-124
 Identities = 244/496 (49%), Positives = 322/496 (64%), Gaps = 17/496 (3%)
 Frame = +1

Query: 1021 CSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGSVMSQSLL 1200
            CS++A TGPCRA++ RWYFD+++GKC  F YGGCGGNRNNF++E+YCMAVC ++  + LL
Sbjct: 310  CSQEAMTGPCRAVMPRWYFDLSKGKCVRFIYGGCGGNRNNFESEDYCMAVCKTMSKEPLL 369

Query: 1201 KTTQEHLPQDPVKLPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVM 1380
                       V +P T   T D VD Y ET  D+NEHA FQKAKE+LE +HR RM +V 
Sbjct: 370  SF---------VSVPPTPLPTND-VDVYFETSADDNEHARFQKAKEQLEIRHRNRMDRVK 419

Query: 1381 REWEEAERQAKNLPKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRR 1560
            +EWEEAE QAKNLPKA+++ +IQHFQ  V++LE+EAA+E+QQLVETH+ARVEAMLNDRRR
Sbjct: 420  KEWEEAELQAKNLPKAERQTLIQHFQAMVKALEKEAASEKQQLVETHLARVEAMLNDRRR 479

Query: 1561 LALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQV 1740
            +ALENY+ ALQ+ PPRP  +   L++YVRAE KDR HT++H++HV  VDP+KAAQ++SQV
Sbjct: 480  MALENYLAALQSDPPRPHRILQALRRYVRAENKDRLHTIRHYQHVLAVDPEKAAQMKSQV 539

Query: 1741 MTHLRVIYERMNQSLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGN 1920
            MTHL VI ER NQSLSLLY VP VA+EIQ+E+DELLQ+++       A+M          
Sbjct: 540  MTHLHVIEERRNQSLSLLYKVPYVAQEIQEEIDELLQEQR-------ADM---------- 582

Query: 1921 DALMPSLTETKTTVELLPVNGEFSLDDLQPWHPF-GVDSVPANTENEVE---PVDARPAA 2088
            D    S++ET   V    V+ E S D++ P+HPF    S+P N + + E   P+     A
Sbjct: 583  DQFTASISETPVDVR---VSSEES-DEIPPFHPFHPFPSLPENEDTQRELYHPMKKGSGA 638

Query: 2089 ---DRGL----------TTRPGSGLTNIKTEEISEVKMDAEFRHDSGYEVHHQKLVFFAE 2229
               D GL            +    +   +T ++ E+  +AE     G E   + +    E
Sbjct: 639  GEQDGGLIGAEEKVINSKNKVDENMVIDETLDVKEMIFNAE--RVGGLEAEPESVGPLRE 696

Query: 2230 DVGSNKGAIIGLXXXXXXXXXXXXXXXXXXKKKQYTSIHHGVVEVDAAVTPEERHLSKMQ 2409
            D   +  A+IGL                  +K+QY +I HG+VEVD  +TPEERHL+KMQ
Sbjct: 697  DFSLSSSALIGLLVIAVAIATVIVISLVMLRKRQYGTISHGIVEVDPMLTPEERHLNKMQ 756

Query: 2410 QNGYENPTYKFFEQMQ 2457
             +GYENPTYK+ EQMQ
Sbjct: 757  NHGYENPTYKYLEQMQ 772



 Score =  267 bits (682), Expect = 5e-71
 Identities = 121/202 (59%), Positives = 155/202 (76%), Gaps = 3/202 (1%)
 Frame = +1

Query: 118 SSALGAPRRVAMLPGLALVLLAAWTARALEVPTDGNAGL---LAEPQVAMFCGKLNMHMN 288
           ++A  A  ++ +L  L L   AA  A  +E     NAG    +AEPQ+A+FCGKLNMH+N
Sbjct: 6   TAAASATGKLLVLLLLGLTAPAAALAGYIEALA-ANAGTGFAVAEPQIAVFCGKLNMHVN 64

Query: 289 VQNGKWESDPSGTKTCIGTKEGILQYCQEVYPELQITNVVEANQPVTIQNWCKRSRKQCK 468
           +Q GKWE DP+GTK C GTKE +LQYCQE+YPELQITNV+EAN+PV++ NWC+R +KQCK
Sbjct: 65  IQTGKWEPDPTGTKKCFGTKEEVLQYCQEMYPELQITNVMEANEPVSVDNWCRRDKKQCK 124

Query: 469 THTHIVIPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLH 648
             TH+V+P++CLVGEFVSD LLVP+KC+F H+E+M+VCE H HWHTV KE C  +   L+
Sbjct: 125 --THVVVPFKCLVGEFVSDVLLVPEKCQFSHKEQMEVCENHQHWHTVVKEACLAQGMTLY 182

Query: 649 DYGMLLPCGIDKFRGVEFVCCP 714
            YGMLLPCG+D+F G E+VCCP
Sbjct: 183 RYGMLLPCGVDRFHGTEYVCCP 204


>ref|XP_856283.1| PREDICTED: similar to Amyloid-like protein 2 precursor (Amyloid
            protein homolog) (APPH) (CDEI-box binding protein)
            (CDEBP) isoform 12 [Canis familiaris].
          Length = 777

 Score =  443 bits (1139), Expect = e-124
 Identities = 244/496 (49%), Positives = 322/496 (64%), Gaps = 17/496 (3%)
 Frame = +1

Query: 1021 CSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGSVMSQSLL 1200
            CS++A TGPCRA++ RWYFD+++GKC  F YGGCGGNRNNF++E+YCMAVC ++  + LL
Sbjct: 314  CSQEAMTGPCRAVMPRWYFDLSKGKCVRFIYGGCGGNRNNFESEDYCMAVCKTMSKEPLL 373

Query: 1201 KTTQEHLPQDPVKLPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVM 1380
                       V +P T   T D VD Y ET  D+NEHA FQKAKE+LE +HR RM +V 
Sbjct: 374  SF---------VSVPPTPLPTND-VDVYFETSADDNEHARFQKAKEQLEIRHRNRMDRVK 423

Query: 1381 REWEEAERQAKNLPKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRR 1560
            +EWEEAE QAKNLPKA+++ +IQHFQ  V++LE+EAA+E+QQLVETH+ARVEAMLNDRRR
Sbjct: 424  KEWEEAELQAKNLPKAERQTLIQHFQAMVKALEKEAASEKQQLVETHLARVEAMLNDRRR 483

Query: 1561 LALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQV 1740
            +ALENY+ ALQ+ PPRP  +   L++YVRAE KDR HT++H++HV  VDP+KAAQ++SQV
Sbjct: 484  MALENYLAALQSDPPRPHRILQALRRYVRAENKDRLHTIRHYQHVLAVDPEKAAQMKSQV 543

Query: 1741 MTHLRVIYERMNQSLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGN 1920
            MTHL VI ER NQSLSLLY VP VA+EIQ+E+DELLQ+++       A+M          
Sbjct: 544  MTHLHVIEERRNQSLSLLYKVPYVAQEIQEEIDELLQEQR-------ADM---------- 586

Query: 1921 DALMPSLTETKTTVELLPVNGEFSLDDLQPWHPF-GVDSVPANTENEVE---PVDARPAA 2088
            D    S++ET   V    V+ E S D++ P+HPF    S+P N + + E   P+     A
Sbjct: 587  DQFTASISETPVDVR---VSSEES-DEIPPFHPFHPFPSLPENEDTQRELYHPMKKGSGA 642

Query: 2089 ---DRGL----------TTRPGSGLTNIKTEEISEVKMDAEFRHDSGYEVHHQKLVFFAE 2229
               D GL            +    +   +T ++ E+  +AE     G E   + +    E
Sbjct: 643  GEQDGGLIGAEEKVINSKNKVDENMVIDETLDVKEMIFNAE--RVGGLEAEPESVGPLRE 700

Query: 2230 DVGSNKGAIIGLXXXXXXXXXXXXXXXXXXKKKQYTSIHHGVVEVDAAVTPEERHLSKMQ 2409
            D   +  A+IGL                  +K+QY +I HG+VEVD  +TPEERHL+KMQ
Sbjct: 701  DFSLSSSALIGLLVIAVAIATVIVISLVMLRKRQYGTISHGIVEVDPMLTPEERHLNKMQ 760

Query: 2410 QNGYENPTYKFFEQMQ 2457
             +GYENPTYK+ EQMQ
Sbjct: 761  NHGYENPTYKYLEQMQ 776



 Score =  267 bits (682), Expect = 5e-71
 Identities = 121/202 (59%), Positives = 155/202 (76%), Gaps = 3/202 (1%)
 Frame = +1

Query: 118 SSALGAPRRVAMLPGLALVLLAAWTARALEVPTDGNAGL---LAEPQVAMFCGKLNMHMN 288
           ++A  A  ++ +L  L L   AA  A  +E     NAG    +AEPQ+A+FCGKLNMH+N
Sbjct: 6   TAAASATGKLLVLLLLGLTAPAAALAGYIEALA-ANAGTGFAVAEPQIAVFCGKLNMHVN 64

Query: 289 VQNGKWESDPSGTKTCIGTKEGILQYCQEVYPELQITNVVEANQPVTIQNWCKRSRKQCK 468
           +Q GKWE DP+GTK C GTKE +LQYCQE+YPELQITNV+EAN+PV++ NWC+R +KQCK
Sbjct: 65  IQTGKWEPDPTGTKKCFGTKEEVLQYCQEMYPELQITNVMEANEPVSVDNWCRRDKKQCK 124

Query: 469 THTHIVIPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLH 648
             TH+V+P++CLVGEFVSD LLVP+KC+F H+E+M+VCE H HWHTV KE C  +   L+
Sbjct: 125 --THVVVPFKCLVGEFVSDVLLVPEKCQFSHKEQMEVCENHQHWHTVVKEACLAQGMTLY 182

Query: 649 DYGMLLPCGIDKFRGVEFVCCP 714
            YGMLLPCG+D+F G E+VCCP
Sbjct: 183 RYGMLLPCGVDRFHGTEYVCCP 204


>ref|XP_856246.1| PREDICTED: similar to Amyloid-like protein 2 precursor (Amyloid
            protein homolog) (APPH) (CDEI-box binding protein)
            (CDEBP) isoform 11 [Canis familiaris].
          Length = 786

 Score =  442 bits (1136), Expect = e-123
 Identities = 242/496 (48%), Positives = 320/496 (64%), Gaps = 17/496 (3%)
 Frame = +1

Query: 1021 CSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGSVMSQSLL 1200
            CS++A TGPCRA++ RWYFD+++GKC  F YGGCGGNRNNF++E+YCMAVC ++      
Sbjct: 314  CSQEAMTGPCRAVMPRWYFDLSKGKCVRFIYGGCGGNRNNFESEDYCMAVCKTMSKSRRR 373

Query: 1201 KTTQEHLPQDPVKLPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVM 1380
                  +   P  +P T   T D VD Y ET  D+NEHA FQKAKE+LE +HR RM +V 
Sbjct: 374  PANFRPVSFGPRGIPPTPLPTND-VDVYFETSADDNEHARFQKAKEQLEIRHRNRMDRVK 432

Query: 1381 REWEEAERQAKNLPKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRR 1560
            +EWEEAE QAKNLPKA+++ +IQHFQ  V++LE+EAA+E+QQLVETH+ARVEAMLNDRRR
Sbjct: 433  KEWEEAELQAKNLPKAERQTLIQHFQAMVKALEKEAASEKQQLVETHLARVEAMLNDRRR 492

Query: 1561 LALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQV 1740
            +ALENY+ ALQ+ PPRP  +   L++YVRAE KDR HT++H++HV  VDP+KAAQ++SQV
Sbjct: 493  MALENYLAALQSDPPRPHRILQALRRYVRAENKDRLHTIRHYQHVLAVDPEKAAQMKSQV 552

Query: 1741 MTHLRVIYERMNQSLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGN 1920
            MTHL VI ER NQSLSLLY VP VA+EIQ+E+DELLQ+++       A+M          
Sbjct: 553  MTHLHVIEERRNQSLSLLYKVPYVAQEIQEEIDELLQEQR-------ADM---------- 595

Query: 1921 DALMPSLTETKTTVELLPVNGEFSLDDLQPWHPF-GVDSVPANTENEVE---PVDARPAA 2088
            D    S++ET   V    V+ E S D++ P+HPF    S+P N + + E   P+     A
Sbjct: 596  DQFTASISETPVDVR---VSSEES-DEIPPFHPFHPFPSLPENEDTQRELYHPMKKGSGA 651

Query: 2089 ---DRGL----------TTRPGSGLTNIKTEEISEVKMDAEFRHDSGYEVHHQKLVFFAE 2229
               D GL            +    +   +T ++ E+  +AE     G E   + +    E
Sbjct: 652  GEQDGGLIGAEEKVINSKNKVDENMVIDETLDVKEMIFNAE--RVGGLEAEPESVGPLRE 709

Query: 2230 DVGSNKGAIIGLXXXXXXXXXXXXXXXXXXKKKQYTSIHHGVVEVDAAVTPEERHLSKMQ 2409
            D   +  A+IGL                  +K+QY +I HG+VEVD  +TPEERHL+KMQ
Sbjct: 710  DFSLSSSALIGLLVIAVAIATVIVISLVMLRKRQYGTISHGIVEVDPMLTPEERHLNKMQ 769

Query: 2410 QNGYENPTYKFFEQMQ 2457
             +GYENPTYK+ EQMQ
Sbjct: 770  NHGYENPTYKYLEQMQ 785



 Score =  267 bits (682), Expect = 5e-71
 Identities = 121/202 (59%), Positives = 155/202 (76%), Gaps = 3/202 (1%)
 Frame = +1

Query: 118 SSALGAPRRVAMLPGLALVLLAAWTARALEVPTDGNAGL---LAEPQVAMFCGKLNMHMN 288
           ++A  A  ++ +L  L L   AA  A  +E     NAG    +AEPQ+A+FCGKLNMH+N
Sbjct: 6   TAAASATGKLLVLLLLGLTAPAAALAGYIEALA-ANAGTGFAVAEPQIAVFCGKLNMHVN 64

Query: 289 VQNGKWESDPSGTKTCIGTKEGILQYCQEVYPELQITNVVEANQPVTIQNWCKRSRKQCK 468
           +Q GKWE DP+GTK C GTKE +LQYCQE+YPELQITNV+EAN+PV++ NWC+R +KQCK
Sbjct: 65  IQTGKWEPDPTGTKKCFGTKEEVLQYCQEMYPELQITNVMEANEPVSVDNWCRRDKKQCK 124

Query: 469 THTHIVIPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLH 648
             TH+V+P++CLVGEFVSD LLVP+KC+F H+E+M+VCE H HWHTV KE C  +   L+
Sbjct: 125 --THVVVPFKCLVGEFVSDVLLVPEKCQFSHKEQMEVCENHQHWHTVVKEACLAQGMTLY 182

Query: 649 DYGMLLPCGIDKFRGVEFVCCP 714
            YGMLLPCG+D+F G E+VCCP
Sbjct: 183 RYGMLLPCGVDRFHGTEYVCCP 204


>ref|XP_856859.1| PREDICTED: similar to Amyloid-like protein 2 precursor (Amyloid
            protein homolog) (APPH) (CDEI-box binding protein)
            (CDEBP) isoform 26 [Canis familiaris].
          Length = 755

 Score =  437 bits (1123), Expect = e-122
 Identities = 238/484 (49%), Positives = 312/484 (64%), Gaps = 5/484 (1%)
 Frame = +1

Query: 1021 CSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGSVMSQSLL 1200
            CS++A TGPCRA++ RWYFD+++GKC  F YGGCGGNRNNF++E+YCMAVC +++     
Sbjct: 314  CSQEAMTGPCRAVMPRWYFDLSKGKCVRFIYGGCGGNRNNFESEDYCMAVCKTMIP---- 369

Query: 1201 KTTQEHLPQDPVKLPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVM 1380
                      P  LPT      + VD Y ET  D+NEHA FQKAKE+LE +HR RM +V 
Sbjct: 370  ----------PTPLPT------NDVDVYFETSADDNEHARFQKAKEQLEIRHRNRMDRVK 413

Query: 1381 REWEEAERQAKNLPKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRR 1560
            +EWEEAE QAKNLPKA+++ +IQHFQ  V++LE+EAA+E+QQLVETH+ARVEAMLNDRRR
Sbjct: 414  KEWEEAELQAKNLPKAERQTLIQHFQAMVKALEKEAASEKQQLVETHLARVEAMLNDRRR 473

Query: 1561 LALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQV 1740
            +ALENY+ ALQ+ PPRP  +   L++YVRAE KDR HT++H++HV  VDP+KAAQ++SQV
Sbjct: 474  MALENYLAALQSDPPRPHRILQALRRYVRAENKDRLHTIRHYQHVLAVDPEKAAQMKSQV 533

Query: 1741 MTHLRVIYERMNQSLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGN 1920
            MTHL VI ER NQSLSLLY VP VA+EIQ+E+DELLQ+++       A+M          
Sbjct: 534  MTHLHVIEERRNQSLSLLYKVPYVAQEIQEEIDELLQEQR-------ADM---------- 576

Query: 1921 DALMPSLTETKTTVELLPVNGEFSLDDLQPWHPFGVDSVPANTENEVEPVDARP----AA 2088
            D    S++ET   V    V+ E S D++ P+HPF     P+  ENE      +      A
Sbjct: 577  DQFTASISETPVDVR---VSSEES-DEIPPFHPF--HPFPSLPENEGSGAGEQDGGLIGA 630

Query: 2089 DRGLTTRPGSGLTNIKTEEISEVK-MDAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGL 2265
            +  +         N+  +E  +VK M        G E   + +    ED   +  A+IGL
Sbjct: 631  EEKVINSKNKVDENMVIDETLDVKEMIFNAERVGGLEAEPESVGPLREDFSLSSSALIGL 690

Query: 2266 XXXXXXXXXXXXXXXXXXKKKQYTSIHHGVVEVDAAVTPEERHLSKMQQNGYENPTYKFF 2445
                              +K+QY +I HG+VEVD  +TPEERHL+KMQ +GYENPTYK+ 
Sbjct: 691  LVIAVAIATVIVISLVMLRKRQYGTISHGIVEVDPMLTPEERHLNKMQNHGYENPTYKYL 750

Query: 2446 EQMQ 2457
            EQMQ
Sbjct: 751  EQMQ 754



 Score =  267 bits (682), Expect = 5e-71
 Identities = 121/202 (59%), Positives = 155/202 (76%), Gaps = 3/202 (1%)
 Frame = +1

Query: 118 SSALGAPRRVAMLPGLALVLLAAWTARALEVPTDGNAGL---LAEPQVAMFCGKLNMHMN 288
           ++A  A  ++ +L  L L   AA  A  +E     NAG    +AEPQ+A+FCGKLNMH+N
Sbjct: 6   TAAASATGKLLVLLLLGLTAPAAALAGYIEALA-ANAGTGFAVAEPQIAVFCGKLNMHVN 64

Query: 289 VQNGKWESDPSGTKTCIGTKEGILQYCQEVYPELQITNVVEANQPVTIQNWCKRSRKQCK 468
           +Q GKWE DP+GTK C GTKE +LQYCQE+YPELQITNV+EAN+PV++ NWC+R +KQCK
Sbjct: 65  IQTGKWEPDPTGTKKCFGTKEEVLQYCQEMYPELQITNVMEANEPVSVDNWCRRDKKQCK 124

Query: 469 THTHIVIPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLH 648
             TH+V+P++CLVGEFVSD LLVP+KC+F H+E+M+VCE H HWHTV KE C  +   L+
Sbjct: 125 --THVVVPFKCLVGEFVSDVLLVPEKCQFSHKEQMEVCENHQHWHTVVKEACLAQGMTLY 182

Query: 649 DYGMLLPCGIDKFRGVEFVCCP 714
            YGMLLPCG+D+F G E+VCCP
Sbjct: 183 RYGMLLPCGVDRFHGTEYVCCP 204


>ref|XP_856781.1| PREDICTED: similar to Amyloid-like protein 2 precursor (Amyloid
            protein homolog) (APPH) (CDEI-box binding protein)
            (CDEBP) isoform 24 [Canis familiaris].
          Length = 732

 Score =  437 bits (1123), Expect = e-122
 Identities = 238/484 (49%), Positives = 312/484 (64%), Gaps = 5/484 (1%)
 Frame = +1

Query: 1021 CSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGSVMSQSLL 1200
            CS++A TGPCRA++ RWYFD+++GKC  F YGGCGGNRNNF++E+YCMAVC +++     
Sbjct: 291  CSQEAMTGPCRAVMPRWYFDLSKGKCVRFIYGGCGGNRNNFESEDYCMAVCKTMIP---- 346

Query: 1201 KTTQEHLPQDPVKLPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVM 1380
                      P  LPT      + VD Y ET  D+NEHA FQKAKE+LE +HR RM +V 
Sbjct: 347  ----------PTPLPT------NDVDVYFETSADDNEHARFQKAKEQLEIRHRNRMDRVK 390

Query: 1381 REWEEAERQAKNLPKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRR 1560
            +EWEEAE QAKNLPKA+++ +IQHFQ  V++LE+EAA+E+QQLVETH+ARVEAMLNDRRR
Sbjct: 391  KEWEEAELQAKNLPKAERQTLIQHFQAMVKALEKEAASEKQQLVETHLARVEAMLNDRRR 450

Query: 1561 LALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQV 1740
            +ALENY+ ALQ+ PPRP  +   L++YVRAE KDR HT++H++HV  VDP+KAAQ++SQV
Sbjct: 451  MALENYLAALQSDPPRPHRILQALRRYVRAENKDRLHTIRHYQHVLAVDPEKAAQMKSQV 510

Query: 1741 MTHLRVIYERMNQSLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGN 1920
            MTHL VI ER NQSLSLLY VP VA+EIQ+E+DELLQ+++       A+M          
Sbjct: 511  MTHLHVIEERRNQSLSLLYKVPYVAQEIQEEIDELLQEQR-------ADM---------- 553

Query: 1921 DALMPSLTETKTTVELLPVNGEFSLDDLQPWHPFGVDSVPANTENEVEPVDARP----AA 2088
            D    S++ET   V    V+ E S D++ P+HPF     P+  ENE      +      A
Sbjct: 554  DQFTASISETPVDVR---VSSEES-DEIPPFHPF--HPFPSLPENEGSGAGEQDGGLIGA 607

Query: 2089 DRGLTTRPGSGLTNIKTEEISEVK-MDAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGL 2265
            +  +         N+  +E  +VK M        G E   + +    ED   +  A+IGL
Sbjct: 608  EEKVINSKNKVDENMVIDETLDVKEMIFNAERVGGLEAEPESVGPLREDFSLSSSALIGL 667

Query: 2266 XXXXXXXXXXXXXXXXXXKKKQYTSIHHGVVEVDAAVTPEERHLSKMQQNGYENPTYKFF 2445
                              +K+QY +I HG+VEVD  +TPEERHL+KMQ +GYENPTYK+ 
Sbjct: 668  LVIAVAIATVIVISLVMLRKRQYGTISHGIVEVDPMLTPEERHLNKMQNHGYENPTYKYL 727

Query: 2446 EQMQ 2457
            EQMQ
Sbjct: 728  EQMQ 731



 Score =  267 bits (682), Expect = 5e-71
 Identities = 121/202 (59%), Positives = 155/202 (76%), Gaps = 3/202 (1%)
 Frame = +1

Query: 118 SSALGAPRRVAMLPGLALVLLAAWTARALEVPTDGNAGL---LAEPQVAMFCGKLNMHMN 288
           ++A  A  ++ +L  L L   AA  A  +E     NAG    +AEPQ+A+FCGKLNMH+N
Sbjct: 6   TAAASATGKLLVLLLLGLTAPAAALAGYIEALA-ANAGTGFAVAEPQIAVFCGKLNMHVN 64

Query: 289 VQNGKWESDPSGTKTCIGTKEGILQYCQEVYPELQITNVVEANQPVTIQNWCKRSRKQCK 468
           +Q GKWE DP+GTK C GTKE +LQYCQE+YPELQITNV+EAN+PV++ NWC+R +KQCK
Sbjct: 65  IQTGKWEPDPTGTKKCFGTKEEVLQYCQEMYPELQITNVMEANEPVSVDNWCRRDKKQCK 124

Query: 469 THTHIVIPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLH 648
             TH+V+P++CLVGEFVSD LLVP+KC+F H+E+M+VCE H HWHTV KE C  +   L+
Sbjct: 125 --THVVVPFKCLVGEFVSDVLLVPEKCQFSHKEQMEVCENHQHWHTVVKEACLAQGMTLY 182

Query: 649 DYGMLLPCGIDKFRGVEFVCCP 714
            YGMLLPCG+D+F G E+VCCP
Sbjct: 183 RYGMLLPCGVDRFHGTEYVCCP 204


  Database: RefSeq49_CP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,874,504
  Number of sequences in database:  33,336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 113,207,678
Number of extensions: 3004869
Number of successful extensions: 12510
Number of sequences better than 1.0e-05: 41
Number of HSP's gapped: 12337
Number of HSP's successfully gapped: 76
Length of query: 988
Length of database: 18,874,504
Length adjustment: 113
Effective length of query: 875
Effective length of database: 15,107,536
Effective search space: 13219094000
Effective search space used: 13219094000
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-001194
         (2964 letters)

Database: RefSeq49_HP.fasta 
           32,964 sequences; 18,297,164 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_000475.1| amyloid beta A4 protein isoform a precursor [Ho...  1335   0.0  
Alignment   gi|NP_958816.1| amyloid beta A4 protein isoform b precursor [Ho...  1294   0.0  
Alignment   gi|NP_001191230.1| amyloid beta A4 protein isoform h precursor ...  1288   0.0  
Alignment   gi|NP_001129488.1| amyloid beta A4 protein isoform d [Homo sapi...  1259   0.0  
Alignment   gi|NP_001191231.1| amyloid beta A4 protein isoform i precursor ...  1247   0.0  
Alignment   gi|NP_001129602.1| amyloid beta A4 protein isoform f precursor ...  1189   0.0  
Alignment   gi|NP_001129603.1| amyloid beta A4 protein isoform g [Homo sapi...   770   0.0  
Alignment   gi|NP_958817.1| amyloid beta A4 protein isoform c precursor [Ho...   770   0.0  
Alignment   gi|NP_001129601.1| amyloid beta A4 protein isoform e precursor ...   770   0.0  
Alignment   gi|NP_001191232.1| amyloid beta A4 protein isoform j precursor ...   723   0.0  

>ref|NP_000475.1| amyloid beta A4 protein isoform a precursor [Homo sapiens].
          Length = 770

 Score = 1335 bits (3455), Expect = 0.0
 Identities = 664/770 (86%), Positives = 669/770 (86%)
 Frame = +1

Query: 151  MLPGLALVLLAAWTARALEVPTDGNAGLLAEPQVAMFCGKLNMHMNVQNGKWESDPSGTK 330
            MLPGLAL+LLAAWTARALEVPTDGNAGLLAEPQ+AMFCG+LNMHMNVQNGKW+SDPSGTK
Sbjct: 1    MLPGLALLLLAAWTARALEVPTDGNAGLLAEPQIAMFCGRLNMHMNVQNGKWDSDPSGTK 60

Query: 331  TCIGTKEGILQYCQEVYPELQITNVVEANQPVTIQNWCKRSRKQCKTHTHIVIPYRCLVG 510
            TCI TKEGILQYCQEVYPELQITNVVEANQPVTIQNWCKR RKQCKTH H VIPYRCLVG
Sbjct: 61   TCIDTKEGILQYCQEVYPELQITNVVEANQPVTIQNWCKRGRKQCKTHPHFVIPYRCLVG 120

Query: 511  EFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLHDYGMLLPCGIDKFR 690
            EFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLHDYGMLLPCGIDKFR
Sbjct: 121  EFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLHDYGMLLPCGIDKFR 180

Query: 691  GVEFVCCPLXXXXXXXXXXXXXXXXXXVWWGGADTDYADGSEDKVVXXXXXXXXXXXXXX 870
            GVEFVCCPL                  VWWGGADTDYADGSEDKVV              
Sbjct: 181  GVEFVCCPLAEESDNVDSADAEEDDSDVWWGGADTDYADGSEDKVVEVAEEEEVAEVEEE 240

Query: 871  XXXXXXXXXXXXXXXXXXXXPYEEATERXXXXXXXXXXXXXXXXXXXXXXCSEQAETGPC 1050
                                PYEEATER                      CSEQAETGPC
Sbjct: 241  EADDDEDDEDGDEVEEEAEEPYEEATERTTSIATTTTTTTESVEEVVREVCSEQAETGPC 300

Query: 1051 RAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGSVMSQSLLKTTQEHLPQD 1230
            RAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGS MSQSLLKTTQE L +D
Sbjct: 301  RAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGSAMSQSLLKTTQEPLARD 360

Query: 1231 PVKLPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQA 1410
            PVKLPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQA
Sbjct: 361  PVKLPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQA 420

Query: 1411 KNLPKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRLALENYITAL 1590
            KNLPKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRLALENYITAL
Sbjct: 421  KNLPKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRLALENYITAL 480

Query: 1591 QAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYER 1770
            QAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYER
Sbjct: 481  QAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYER 540

Query: 1771 MNQSLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGNDALMPSLTET 1950
            MNQSLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGNDALMPSLTET
Sbjct: 541  MNQSLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGNDALMPSLTET 600

Query: 1951 KTTVELLPVNGEFSLDDLQPWHPFGVDSVPANTENEVEPVDARPAADRGLTTRPGSGLTN 2130
            KTTVELLPVNGEFSLDDLQPWH FG DSVPANTENEVEPVDARPAADRGLTTRPGSGLTN
Sbjct: 601  KTTVELLPVNGEFSLDDLQPWHSFGADSVPANTENEVEPVDARPAADRGLTTRPGSGLTN 660

Query: 2131 IKTEEISEVKMDAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLXXXXXXXXXXXXXXX 2310
            IKTEEISEVKMDAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGL               
Sbjct: 661  IKTEEISEVKMDAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIATVIVITL 720

Query: 2311 XXXKKKQYTSIHHGVVEVDAAVTPEERHLSKMQQNGYENPTYKFFEQMQN 2460
               KKKQYTSIHHGVVEVDAAVTPEERHLSKMQQNGYENPTYKFFEQMQN
Sbjct: 721  VMLKKKQYTSIHHGVVEVDAAVTPEERHLSKMQQNGYENPTYKFFEQMQN 770


>ref|NP_958816.1| amyloid beta A4 protein isoform b precursor [Homo sapiens].
          Length = 751

 Score = 1294 bits (3348), Expect = 0.0
 Identities = 647/770 (84%), Positives = 652/770 (84%)
 Frame = +1

Query: 151  MLPGLALVLLAAWTARALEVPTDGNAGLLAEPQVAMFCGKLNMHMNVQNGKWESDPSGTK 330
            MLPGLAL+LLAAWTARALEVPTDGNAGLLAEPQ+AMFCG+LNMHMNVQNGKW+SDPSGTK
Sbjct: 1    MLPGLALLLLAAWTARALEVPTDGNAGLLAEPQIAMFCGRLNMHMNVQNGKWDSDPSGTK 60

Query: 331  TCIGTKEGILQYCQEVYPELQITNVVEANQPVTIQNWCKRSRKQCKTHTHIVIPYRCLVG 510
            TCI TKEGILQYCQEVYPELQITNVVEANQPVTIQNWCKR RKQCKTH H VIPYRCLVG
Sbjct: 61   TCIDTKEGILQYCQEVYPELQITNVVEANQPVTIQNWCKRGRKQCKTHPHFVIPYRCLVG 120

Query: 511  EFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLHDYGMLLPCGIDKFR 690
            EFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLHDYGMLLPCGIDKFR
Sbjct: 121  EFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLHDYGMLLPCGIDKFR 180

Query: 691  GVEFVCCPLXXXXXXXXXXXXXXXXXXVWWGGADTDYADGSEDKVVXXXXXXXXXXXXXX 870
            GVEFVCCPL                  VWWGGADTDYADGSEDKVV              
Sbjct: 181  GVEFVCCPLAEESDNVDSADAEEDDSDVWWGGADTDYADGSEDKVVEVAEEEEVAEVEEE 240

Query: 871  XXXXXXXXXXXXXXXXXXXXPYEEATERXXXXXXXXXXXXXXXXXXXXXXCSEQAETGPC 1050
                                PYEEATER                      CSEQAETGPC
Sbjct: 241  EADDDEDDEDGDEVEEEAEEPYEEATERTTSIATTTTTTTESVEEVVREVCSEQAETGPC 300

Query: 1051 RAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGSVMSQSLLKTTQEHLPQD 1230
            RAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGS                 
Sbjct: 301  RAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGSA---------------- 344

Query: 1231 PVKLPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQA 1410
               +PTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQA
Sbjct: 345  ---IPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQA 401

Query: 1411 KNLPKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRLALENYITAL 1590
            KNLPKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRLALENYITAL
Sbjct: 402  KNLPKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRLALENYITAL 461

Query: 1591 QAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYER 1770
            QAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYER
Sbjct: 462  QAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYER 521

Query: 1771 MNQSLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGNDALMPSLTET 1950
            MNQSLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGNDALMPSLTET
Sbjct: 522  MNQSLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGNDALMPSLTET 581

Query: 1951 KTTVELLPVNGEFSLDDLQPWHPFGVDSVPANTENEVEPVDARPAADRGLTTRPGSGLTN 2130
            KTTVELLPVNGEFSLDDLQPWH FG DSVPANTENEVEPVDARPAADRGLTTRPGSGLTN
Sbjct: 582  KTTVELLPVNGEFSLDDLQPWHSFGADSVPANTENEVEPVDARPAADRGLTTRPGSGLTN 641

Query: 2131 IKTEEISEVKMDAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLXXXXXXXXXXXXXXX 2310
            IKTEEISEVKMDAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGL               
Sbjct: 642  IKTEEISEVKMDAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIATVIVITL 701

Query: 2311 XXXKKKQYTSIHHGVVEVDAAVTPEERHLSKMQQNGYENPTYKFFEQMQN 2460
               KKKQYTSIHHGVVEVDAAVTPEERHLSKMQQNGYENPTYKFFEQMQN
Sbjct: 702  VMLKKKQYTSIHHGVVEVDAAVTPEERHLSKMQQNGYENPTYKFFEQMQN 751


>ref|NP_001191230.1| amyloid beta A4 protein isoform h precursor [Homo sapiens].
          Length = 752

 Score = 1288 bits (3333), Expect = 0.0
 Identities = 646/770 (83%), Positives = 651/770 (84%)
 Frame = +1

Query: 151  MLPGLALVLLAAWTARALEVPTDGNAGLLAEPQVAMFCGKLNMHMNVQNGKWESDPSGTK 330
            MLPGLAL+LLAAWTARALEVPTDGNAGLLAEPQ+AMFCG+LNMHMNVQNGKW+SDPSGTK
Sbjct: 1    MLPGLALLLLAAWTARALEVPTDGNAGLLAEPQIAMFCGRLNMHMNVQNGKWDSDPSGTK 60

Query: 331  TCIGTKEGILQYCQEVYPELQITNVVEANQPVTIQNWCKRSRKQCKTHTHIVIPYRCLVG 510
            TCI TKEGILQYCQEVYPELQITNVVEANQPVTIQNWCKR RKQCKTH H VIPYRCLVG
Sbjct: 61   TCIDTKEGILQYCQEVYPELQITNVVEANQPVTIQNWCKRGRKQCKTHPHFVIPYRCLVG 120

Query: 511  EFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLHDYGMLLPCGIDKFR 690
            EFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLHDYGMLLPCGIDKFR
Sbjct: 121  EFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLHDYGMLLPCGIDKFR 180

Query: 691  GVEFVCCPLXXXXXXXXXXXXXXXXXXVWWGGADTDYADGSEDKVVXXXXXXXXXXXXXX 870
            GVEFVCCPL                  VWWGGADTDYADGSEDKVV              
Sbjct: 181  GVEFVCCPLAEESDNVDSADAEEDDSDVWWGGADTDYADGSEDKVVEVAEEEEVAEVEEE 240

Query: 871  XXXXXXXXXXXXXXXXXXXXPYEEATERXXXXXXXXXXXXXXXXXXXXXXCSEQAETGPC 1050
                                PYEEATER                      CSEQAETGPC
Sbjct: 241  EADDDEDDEDGDEVEEEAEEPYEEATERTTSIATTTTTTTESVEEVVREVCSEQAETGPC 300

Query: 1051 RAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGSVMSQSLLKTTQEHLPQD 1230
            RAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGS MSQSLLKTTQE L +D
Sbjct: 301  RAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGSAMSQSLLKTTQEPLARD 360

Query: 1231 PVKLPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQA 1410
            PVKLPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQA
Sbjct: 361  PVKLPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQA 420

Query: 1411 KNLPKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRLALENYITAL 1590
            KNLPKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRLALENYITAL
Sbjct: 421  KNLPKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRLALENYITAL 480

Query: 1591 QAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYER 1770
            QAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYER
Sbjct: 481  QAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYER 540

Query: 1771 MNQSLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGNDALMPSLTET 1950
            MNQSLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGNDALMPSLTET
Sbjct: 541  MNQSLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGNDALMPSLTET 600

Query: 1951 KTTVELLPVNGEFSLDDLQPWHPFGVDSVPANTENEVEPVDARPAADRGLTTRPGSGLTN 2130
            KTTVELLPVNGEFSLDDLQPWH FG DSVPANTENE                  GSGLTN
Sbjct: 601  KTTVELLPVNGEFSLDDLQPWHSFGADSVPANTENE------------------GSGLTN 642

Query: 2131 IKTEEISEVKMDAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLXXXXXXXXXXXXXXX 2310
            IKTEEISEVKMDAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGL               
Sbjct: 643  IKTEEISEVKMDAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIATVIVITL 702

Query: 2311 XXXKKKQYTSIHHGVVEVDAAVTPEERHLSKMQQNGYENPTYKFFEQMQN 2460
               KKKQYTSIHHGVVEVDAAVTPEERHLSKMQQNGYENPTYKFFEQMQN
Sbjct: 703  VMLKKKQYTSIHHGVVEVDAAVTPEERHLSKMQQNGYENPTYKFFEQMQN 752


>ref|NP_001129488.1| amyloid beta A4 protein isoform d [Homo sapiens].
          Length = 746

 Score = 1259 bits (3259), Expect = 0.0
 Identities = 629/751 (83%), Positives = 633/751 (84%)
 Frame = +1

Query: 208  VPTDGNAGLLAEPQVAMFCGKLNMHMNVQNGKWESDPSGTKTCIGTKEGILQYCQEVYPE 387
            VPTDGNAGLLAEPQ+AMFCG+LNMHMNVQNGKW+SDPSGTKTCI TKEGILQYCQEVYPE
Sbjct: 15   VPTDGNAGLLAEPQIAMFCGRLNMHMNVQNGKWDSDPSGTKTCIDTKEGILQYCQEVYPE 74

Query: 388  LQITNVVEANQPVTIQNWCKRSRKQCKTHTHIVIPYRCLVGEFVSDALLVPDKCKFLHQE 567
            LQITNVVEANQPVTIQNWCKR RKQCKTH H VIPYRCLVGEFVSDALLVPDKCKFLHQE
Sbjct: 75   LQITNVVEANQPVTIQNWCKRGRKQCKTHPHFVIPYRCLVGEFVSDALLVPDKCKFLHQE 134

Query: 568  RMDVCETHLHWHTVAKETCSEKSTNLHDYGMLLPCGIDKFRGVEFVCCPLXXXXXXXXXX 747
            RMDVCETHLHWHTVAKETCSEKSTNLHDYGMLLPCGIDKFRGVEFVCCPL          
Sbjct: 135  RMDVCETHLHWHTVAKETCSEKSTNLHDYGMLLPCGIDKFRGVEFVCCPLAEESDNVDSA 194

Query: 748  XXXXXXXXVWWGGADTDYADGSEDKVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 927
                    VWWGGADTDYADGSEDKVV                                 
Sbjct: 195  DAEEDDSDVWWGGADTDYADGSEDKVVEVAEEEEVAEVEEEEADDDEDDEDGDEVEEEAE 254

Query: 928  XPYEEATERXXXXXXXXXXXXXXXXXXXXXXCSEQAETGPCRAMISRWYFDVTEGKCAPF 1107
             PYEEATER                      CSEQAETGPCRAMISRWYFDVTEGKCAPF
Sbjct: 255  EPYEEATERTTSIATTTTTTTESVEEVVREVCSEQAETGPCRAMISRWYFDVTEGKCAPF 314

Query: 1108 FYGGCGGNRNNFDTEEYCMAVCGSVMSQSLLKTTQEHLPQDPVKLPTTAASTPDAVDKYL 1287
            FYGGCGGNRNNFDTEEYCMAVCGS                    +PTTAASTPDAVDKYL
Sbjct: 315  FYGGCGGNRNNFDTEEYCMAVCGSA-------------------IPTTAASTPDAVDKYL 355

Query: 1288 ETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQAKNLPKADKKAVIQHFQEKV 1467
            ETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQAKNLPKADKKAVIQHFQEKV
Sbjct: 356  ETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQAKNLPKADKKAVIQHFQEKV 415

Query: 1468 ESLEQEAANERQQLVETHMARVEAMLNDRRRLALENYITALQAVPPRPRHVFNMLKKYVR 1647
            ESLEQEAANERQQLVETHMARVEAMLNDRRRLALENYITALQAVPPRPRHVFNMLKKYVR
Sbjct: 416  ESLEQEAANERQQLVETHMARVEAMLNDRRRLALENYITALQAVPPRPRHVFNMLKKYVR 475

Query: 1648 AEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYERMNQSLSLLYNVPAVAEEIQ 1827
            AEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYERMNQSLSLLYNVPAVAEEIQ
Sbjct: 476  AEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYERMNQSLSLLYNVPAVAEEIQ 535

Query: 1828 DEVDELLQKEQNYSDDVLANMISEPRISYGNDALMPSLTETKTTVELLPVNGEFSLDDLQ 2007
            DEVDELLQKEQNYSDDVLANMISEPRISYGNDALMPSLTETKTTVELLPVNGEFSLDDLQ
Sbjct: 536  DEVDELLQKEQNYSDDVLANMISEPRISYGNDALMPSLTETKTTVELLPVNGEFSLDDLQ 595

Query: 2008 PWHPFGVDSVPANTENEVEPVDARPAADRGLTTRPGSGLTNIKTEEISEVKMDAEFRHDS 2187
            PWH FG DSVPANTENEVEPVDARPAADRGLTTRPGSGLTNIKTEEISEVKMDAEFRHDS
Sbjct: 596  PWHSFGADSVPANTENEVEPVDARPAADRGLTTRPGSGLTNIKTEEISEVKMDAEFRHDS 655

Query: 2188 GYEVHHQKLVFFAEDVGSNKGAIIGLXXXXXXXXXXXXXXXXXXKKKQYTSIHHGVVEVD 2367
            GYEVHHQKLVFFAEDVGSNKGAIIGL                  KKKQYTSIHHGVVEVD
Sbjct: 656  GYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIATVIVITLVMLKKKQYTSIHHGVVEVD 715

Query: 2368 AAVTPEERHLSKMQQNGYENPTYKFFEQMQN 2460
            AAVTPEERHLSKMQQNGYENPTYKFFEQMQN
Sbjct: 716  AAVTPEERHLSKMQQNGYENPTYKFFEQMQN 746


>ref|NP_001191231.1| amyloid beta A4 protein isoform i precursor [Homo sapiens].
          Length = 733

 Score = 1247 bits (3226), Expect = 0.0
 Identities = 629/770 (81%), Positives = 634/770 (82%)
 Frame = +1

Query: 151  MLPGLALVLLAAWTARALEVPTDGNAGLLAEPQVAMFCGKLNMHMNVQNGKWESDPSGTK 330
            MLPGLAL+LLAAWTARALEVPTDGNAGLLAEPQ+AMFCG+LNMHMNVQNGKW+SDPSGTK
Sbjct: 1    MLPGLALLLLAAWTARALEVPTDGNAGLLAEPQIAMFCGRLNMHMNVQNGKWDSDPSGTK 60

Query: 331  TCIGTKEGILQYCQEVYPELQITNVVEANQPVTIQNWCKRSRKQCKTHTHIVIPYRCLVG 510
            TCI TKEGILQYCQEVYPELQITNVVEANQPVTIQNWCKR RKQCKTH H VIPYRCLVG
Sbjct: 61   TCIDTKEGILQYCQEVYPELQITNVVEANQPVTIQNWCKRGRKQCKTHPHFVIPYRCLVG 120

Query: 511  EFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLHDYGMLLPCGIDKFR 690
            EFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLHDYGMLLPCGIDKFR
Sbjct: 121  EFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLHDYGMLLPCGIDKFR 180

Query: 691  GVEFVCCPLXXXXXXXXXXXXXXXXXXVWWGGADTDYADGSEDKVVXXXXXXXXXXXXXX 870
            GVEFVCCPL                  VWWGGADTDYADGSEDKVV              
Sbjct: 181  GVEFVCCPLAEESDNVDSADAEEDDSDVWWGGADTDYADGSEDKVVEVAEEEEVAEVEEE 240

Query: 871  XXXXXXXXXXXXXXXXXXXXPYEEATERXXXXXXXXXXXXXXXXXXXXXXCSEQAETGPC 1050
                                PYEEATER                      CSEQAETGPC
Sbjct: 241  EADDDEDDEDGDEVEEEAEEPYEEATERTTSIATTTTTTTESVEEVVREVCSEQAETGPC 300

Query: 1051 RAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGSVMSQSLLKTTQEHLPQD 1230
            RAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGS                 
Sbjct: 301  RAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGSA---------------- 344

Query: 1231 PVKLPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQA 1410
               +PTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQA
Sbjct: 345  ---IPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQA 401

Query: 1411 KNLPKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRLALENYITAL 1590
            KNLPKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRLALENYITAL
Sbjct: 402  KNLPKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRLALENYITAL 461

Query: 1591 QAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYER 1770
            QAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYER
Sbjct: 462  QAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYER 521

Query: 1771 MNQSLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGNDALMPSLTET 1950
            MNQSLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGNDALMPSLTET
Sbjct: 522  MNQSLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGNDALMPSLTET 581

Query: 1951 KTTVELLPVNGEFSLDDLQPWHPFGVDSVPANTENEVEPVDARPAADRGLTTRPGSGLTN 2130
            KTTVELLPVNGEFSLDDLQPWH FG DSVPANTENE                  GSGLTN
Sbjct: 582  KTTVELLPVNGEFSLDDLQPWHSFGADSVPANTENE------------------GSGLTN 623

Query: 2131 IKTEEISEVKMDAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLXXXXXXXXXXXXXXX 2310
            IKTEEISEVKMDAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGL               
Sbjct: 624  IKTEEISEVKMDAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIATVIVITL 683

Query: 2311 XXXKKKQYTSIHHGVVEVDAAVTPEERHLSKMQQNGYENPTYKFFEQMQN 2460
               KKKQYTSIHHGVVEVDAAVTPEERHLSKMQQNGYENPTYKFFEQMQN
Sbjct: 684  VMLKKKQYTSIHHGVVEVDAAVTPEERHLSKMQQNGYENPTYKFFEQMQN 733


>ref|NP_001129602.1| amyloid beta A4 protein isoform f precursor [Homo sapiens].
          Length = 714

 Score = 1189 bits (3076), Expect = 0.0
 Identities = 595/696 (85%), Positives = 596/696 (85%)
 Frame = +1

Query: 373  EVYPELQITNVVEANQPVTIQNWCKRSRKQCKTHTHIVIPYRCLVGEFVSDALLVPDKCK 552
            EVYPELQITNVVEANQPVTIQNWCKR RKQCKTH H VIPYRCLVGEFVSDALLVPDKCK
Sbjct: 19   EVYPELQITNVVEANQPVTIQNWCKRGRKQCKTHPHFVIPYRCLVGEFVSDALLVPDKCK 78

Query: 553  FLHQERMDVCETHLHWHTVAKETCSEKSTNLHDYGMLLPCGIDKFRGVEFVCCPLXXXXX 732
            FLHQERMDVCETHLHWHTVAKETCSEKSTNLHDYGMLLPCGIDKFRGVEFVCCPL     
Sbjct: 79   FLHQERMDVCETHLHWHTVAKETCSEKSTNLHDYGMLLPCGIDKFRGVEFVCCPLAEESD 138

Query: 733  XXXXXXXXXXXXXVWWGGADTDYADGSEDKVVXXXXXXXXXXXXXXXXXXXXXXXXXXXX 912
                         VWWGGADTDYADGSEDKVV                            
Sbjct: 139  NVDSADAEEDDSDVWWGGADTDYADGSEDKVVEVAEEEEVAEVEEEEADDDEDDEDGDEV 198

Query: 913  XXXXXXPYEEATERXXXXXXXXXXXXXXXXXXXXXXCSEQAETGPCRAMISRWYFDVTEG 1092
                  PYEEATER                      CSEQAETGPCRAMISRWYFDVTEG
Sbjct: 199  EEEAEEPYEEATERTTSIATTTTTTTESVEEVVREVCSEQAETGPCRAMISRWYFDVTEG 258

Query: 1093 KCAPFFYGGCGGNRNNFDTEEYCMAVCGSVMSQSLLKTTQEHLPQDPVKLPTTAASTPDA 1272
            KCAPFFYGGCGGNRNNFDTEEYCMAVCGS MSQSLLKTTQE L +DPVKLPTTAASTPDA
Sbjct: 259  KCAPFFYGGCGGNRNNFDTEEYCMAVCGSAMSQSLLKTTQEPLARDPVKLPTTAASTPDA 318

Query: 1273 VDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQAKNLPKADKKAVIQH 1452
            VDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQAKNLPKADKKAVIQH
Sbjct: 319  VDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQAKNLPKADKKAVIQH 378

Query: 1453 FQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRLALENYITALQAVPPRPRHVFNML 1632
            FQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRLALENYITALQAVPPRPRHVFNML
Sbjct: 379  FQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRLALENYITALQAVPPRPRHVFNML 438

Query: 1633 KKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYERMNQSLSLLYNVPAV 1812
            KKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYERMNQSLSLLYNVPAV
Sbjct: 439  KKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYERMNQSLSLLYNVPAV 498

Query: 1813 AEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGNDALMPSLTETKTTVELLPVNGEFS 1992
            AEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGNDALMPSLTETKTTVELLPVNGEFS
Sbjct: 499  AEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGNDALMPSLTETKTTVELLPVNGEFS 558

Query: 1993 LDDLQPWHPFGVDSVPANTENEVEPVDARPAADRGLTTRPGSGLTNIKTEEISEVKMDAE 2172
            LDDLQPWH FG DSVPANTENEVEPVDARPAADRGLTTRPGSGLTNIKTEEISEVKMDAE
Sbjct: 559  LDDLQPWHSFGADSVPANTENEVEPVDARPAADRGLTTRPGSGLTNIKTEEISEVKMDAE 618

Query: 2173 FRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLXXXXXXXXXXXXXXXXXXKKKQYTSIHHG 2352
            FRHDSGYEVHHQKLVFFAEDVGSNKGAIIGL                  KKKQYTSIHHG
Sbjct: 619  FRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIATVIVITLVMLKKKQYTSIHHG 678

Query: 2353 VVEVDAAVTPEERHLSKMQQNGYENPTYKFFEQMQN 2460
            VVEVDAAVTPEERHLSKMQQNGYENPTYKFFEQMQN
Sbjct: 679  VVEVDAAVTPEERHLSKMQQNGYENPTYKFFEQMQN 714


>ref|NP_001129603.1| amyloid beta A4 protein isoform g [Homo sapiens].
          Length = 660

 Score =  770 bits (1989), Expect = 0.0
 Identities = 389/419 (92%), Positives = 393/419 (93%)
 Frame = +1

Query: 1204 TTQEHLPQDPVKLPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMR 1383
            TT     ++ V++PTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMR
Sbjct: 242  TTTTESVEEVVRVPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMR 301

Query: 1384 EWEEAERQAKNLPKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRL 1563
            EWEEAERQAKNLPKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRL
Sbjct: 302  EWEEAERQAKNLPKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRL 361

Query: 1564 ALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVM 1743
            ALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVM
Sbjct: 362  ALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVM 421

Query: 1744 THLRVIYERMNQSLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGND 1923
            THLRVIYERMNQSLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGND
Sbjct: 422  THLRVIYERMNQSLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGND 481

Query: 1924 ALMPSLTETKTTVELLPVNGEFSLDDLQPWHPFGVDSVPANTENEVEPVDARPAADRGLT 2103
            ALMPSLTETKTTVELLPVNGEFSLDDLQPWH FG DSVPANTENEVEPVDARPAADRGLT
Sbjct: 482  ALMPSLTETKTTVELLPVNGEFSLDDLQPWHSFGADSVPANTENEVEPVDARPAADRGLT 541

Query: 2104 TRPGSGLTNIKTEEISEVKMDAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLXXXXXX 2283
            TRPGSGLTNIKTEEISEVKMDAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGL      
Sbjct: 542  TRPGSGLTNIKTEEISEVKMDAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVV 601

Query: 2284 XXXXXXXXXXXXKKKQYTSIHHGVVEVDAAVTPEERHLSKMQQNGYENPTYKFFEQMQN 2460
                        KKKQYTSIHHGVVEVDAAVTPEERHLSKMQQNGYENPTYKFFEQMQN
Sbjct: 602  IATVIVITLVMLKKKQYTSIHHGVVEVDAAVTPEERHLSKMQQNGYENPTYKFFEQMQN 660



 Score =  367 bits (942), Expect = e-101
 Identities = 175/233 (75%), Positives = 177/233 (75%)
 Frame = +1

Query: 256 MFCGKLNMHMNVQNGKWESDPSGTKTCIGTKEGILQYCQEVYPELQITNVVEANQPVTIQ 435
           MFCG+LNMHMNVQNGKW+SDPSGTKTCI TKEGILQYCQEVYPELQITNVVEANQPVTIQ
Sbjct: 1   MFCGRLNMHMNVQNGKWDSDPSGTKTCIDTKEGILQYCQEVYPELQITNVVEANQPVTIQ 60

Query: 436 NWCKRSRKQCKTHTHIVIPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAK 615
           NWCKR RKQCKTH H VIPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAK
Sbjct: 61  NWCKRGRKQCKTHPHFVIPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAK 120

Query: 616 ETCSEKSTNLHDYGMLLPCGIDKFRGVEFVCCPLXXXXXXXXXXXXXXXXXXVWWGGADT 795
           ETCSEKSTNLHDYGMLLPCGIDKFRGVEFVCCPL                  VWWGGADT
Sbjct: 121 ETCSEKSTNLHDYGMLLPCGIDKFRGVEFVCCPLAEESDNVDSADAEEDDSDVWWGGADT 180

Query: 796 DYADGSEDKVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPYEEATER 954
           DYADGSEDKVV                                  PYEEATER
Sbjct: 181 DYADGSEDKVVEVAEEEEVAEVEEEEADDDEDDEDGDEVEEEAEEPYEEATER 233


>ref|NP_958817.1| amyloid beta A4 protein isoform c precursor [Homo sapiens].
          Length = 695

 Score =  770 bits (1989), Expect = 0.0
 Identities = 389/419 (92%), Positives = 393/419 (93%)
 Frame = +1

Query: 1204 TTQEHLPQDPVKLPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMR 1383
            TT     ++ V++PTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMR
Sbjct: 277  TTTTESVEEVVRVPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMR 336

Query: 1384 EWEEAERQAKNLPKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRL 1563
            EWEEAERQAKNLPKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRL
Sbjct: 337  EWEEAERQAKNLPKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRL 396

Query: 1564 ALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVM 1743
            ALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVM
Sbjct: 397  ALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVM 456

Query: 1744 THLRVIYERMNQSLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGND 1923
            THLRVIYERMNQSLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGND
Sbjct: 457  THLRVIYERMNQSLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGND 516

Query: 1924 ALMPSLTETKTTVELLPVNGEFSLDDLQPWHPFGVDSVPANTENEVEPVDARPAADRGLT 2103
            ALMPSLTETKTTVELLPVNGEFSLDDLQPWH FG DSVPANTENEVEPVDARPAADRGLT
Sbjct: 517  ALMPSLTETKTTVELLPVNGEFSLDDLQPWHSFGADSVPANTENEVEPVDARPAADRGLT 576

Query: 2104 TRPGSGLTNIKTEEISEVKMDAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLXXXXXX 2283
            TRPGSGLTNIKTEEISEVKMDAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGL      
Sbjct: 577  TRPGSGLTNIKTEEISEVKMDAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVV 636

Query: 2284 XXXXXXXXXXXXKKKQYTSIHHGVVEVDAAVTPEERHLSKMQQNGYENPTYKFFEQMQN 2460
                        KKKQYTSIHHGVVEVDAAVTPEERHLSKMQQNGYENPTYKFFEQMQN
Sbjct: 637  IATVIVITLVMLKKKQYTSIHHGVVEVDAAVTPEERHLSKMQQNGYENPTYKFFEQMQN 695



 Score =  432 bits (1111), Expect = e-121
 Identities = 208/268 (77%), Positives = 212/268 (79%)
 Frame = +1

Query: 151 MLPGLALVLLAAWTARALEVPTDGNAGLLAEPQVAMFCGKLNMHMNVQNGKWESDPSGTK 330
           MLPGLAL+LLAAWTARALEVPTDGNAGLLAEPQ+AMFCG+LNMHMNVQNGKW+SDPSGTK
Sbjct: 1   MLPGLALLLLAAWTARALEVPTDGNAGLLAEPQIAMFCGRLNMHMNVQNGKWDSDPSGTK 60

Query: 331 TCIGTKEGILQYCQEVYPELQITNVVEANQPVTIQNWCKRSRKQCKTHTHIVIPYRCLVG 510
           TCI TKEGILQYCQEVYPELQITNVVEANQPVTIQNWCKR RKQCKTH H VIPYRCLVG
Sbjct: 61  TCIDTKEGILQYCQEVYPELQITNVVEANQPVTIQNWCKRGRKQCKTHPHFVIPYRCLVG 120

Query: 511 EFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLHDYGMLLPCGIDKFR 690
           EFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLHDYGMLLPCGIDKFR
Sbjct: 121 EFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLHDYGMLLPCGIDKFR 180

Query: 691 GVEFVCCPLXXXXXXXXXXXXXXXXXXVWWGGADTDYADGSEDKVVXXXXXXXXXXXXXX 870
           GVEFVCCPL                  VWWGGADTDYADGSEDKVV              
Sbjct: 181 GVEFVCCPLAEESDNVDSADAEEDDSDVWWGGADTDYADGSEDKVVEVAEEEEVAEVEEE 240

Query: 871 XXXXXXXXXXXXXXXXXXXXPYEEATER 954
                               PYEEATER
Sbjct: 241 EADDDEDDEDGDEVEEEAEEPYEEATER 268


>ref|NP_001129601.1| amyloid beta A4 protein isoform e precursor [Homo sapiens].
          Length = 639

 Score =  770 bits (1989), Expect = 0.0
 Identities = 389/419 (92%), Positives = 393/419 (93%)
 Frame = +1

Query: 1204 TTQEHLPQDPVKLPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMR 1383
            TT     ++ V++PTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMR
Sbjct: 221  TTTTESVEEVVRVPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMR 280

Query: 1384 EWEEAERQAKNLPKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRL 1563
            EWEEAERQAKNLPKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRL
Sbjct: 281  EWEEAERQAKNLPKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRL 340

Query: 1564 ALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVM 1743
            ALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVM
Sbjct: 341  ALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVM 400

Query: 1744 THLRVIYERMNQSLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGND 1923
            THLRVIYERMNQSLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGND
Sbjct: 401  THLRVIYERMNQSLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGND 460

Query: 1924 ALMPSLTETKTTVELLPVNGEFSLDDLQPWHPFGVDSVPANTENEVEPVDARPAADRGLT 2103
            ALMPSLTETKTTVELLPVNGEFSLDDLQPWH FG DSVPANTENEVEPVDARPAADRGLT
Sbjct: 461  ALMPSLTETKTTVELLPVNGEFSLDDLQPWHSFGADSVPANTENEVEPVDARPAADRGLT 520

Query: 2104 TRPGSGLTNIKTEEISEVKMDAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLXXXXXX 2283
            TRPGSGLTNIKTEEISEVKMDAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGL      
Sbjct: 521  TRPGSGLTNIKTEEISEVKMDAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVV 580

Query: 2284 XXXXXXXXXXXXKKKQYTSIHHGVVEVDAAVTPEERHLSKMQQNGYENPTYKFFEQMQN 2460
                        KKKQYTSIHHGVVEVDAAVTPEERHLSKMQQNGYENPTYKFFEQMQN
Sbjct: 581  IATVIVITLVMLKKKQYTSIHHGVVEVDAAVTPEERHLSKMQQNGYENPTYKFFEQMQN 639



 Score =  286 bits (732), Expect = 8e-77
 Identities = 139/194 (71%), Positives = 139/194 (71%)
 Frame = +1

Query: 373 EVYPELQITNVVEANQPVTIQNWCKRSRKQCKTHTHIVIPYRCLVGEFVSDALLVPDKCK 552
           EVYPELQITNVVEANQPVTIQNWCKR RKQCKTH H VIPYRCLVGEFVSDALLVPDKCK
Sbjct: 19  EVYPELQITNVVEANQPVTIQNWCKRGRKQCKTHPHFVIPYRCLVGEFVSDALLVPDKCK 78

Query: 553 FLHQERMDVCETHLHWHTVAKETCSEKSTNLHDYGMLLPCGIDKFRGVEFVCCPLXXXXX 732
           FLHQERMDVCETHLHWHTVAKETCSEKSTNLHDYGMLLPCGIDKFRGVEFVCCPL     
Sbjct: 79  FLHQERMDVCETHLHWHTVAKETCSEKSTNLHDYGMLLPCGIDKFRGVEFVCCPLAEESD 138

Query: 733 XXXXXXXXXXXXXVWWGGADTDYADGSEDKVVXXXXXXXXXXXXXXXXXXXXXXXXXXXX 912
                        VWWGGADTDYADGSEDKVV                            
Sbjct: 139 NVDSADAEEDDSDVWWGGADTDYADGSEDKVVEVAEEEEVAEVEEEEADDDEDDEDGDEV 198

Query: 913 XXXXXXPYEEATER 954
                 PYEEATER
Sbjct: 199 EEEAEEPYEEATER 212


>ref|NP_001191232.1| amyloid beta A4 protein isoform j precursor [Homo sapiens].
          Length = 677

 Score =  723 bits (1867), Expect = 0.0
 Identities = 371/419 (88%), Positives = 375/419 (89%)
 Frame = +1

Query: 1204 TTQEHLPQDPVKLPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMR 1383
            TT     ++ V++PTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMR
Sbjct: 277  TTTTESVEEVVRVPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMR 336

Query: 1384 EWEEAERQAKNLPKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRL 1563
            EWEEAERQAKNLPKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRL
Sbjct: 337  EWEEAERQAKNLPKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRL 396

Query: 1564 ALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVM 1743
            ALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVM
Sbjct: 397  ALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVM 456

Query: 1744 THLRVIYERMNQSLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGND 1923
            THLRVIYERMNQSLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGND
Sbjct: 457  THLRVIYERMNQSLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGND 516

Query: 1924 ALMPSLTETKTTVELLPVNGEFSLDDLQPWHPFGVDSVPANTENEVEPVDARPAADRGLT 2103
            ALMPSLTETKTTVELLPVNGEFSLDDLQPWH FG DSVPANTENE               
Sbjct: 517  ALMPSLTETKTTVELLPVNGEFSLDDLQPWHSFGADSVPANTENE--------------- 561

Query: 2104 TRPGSGLTNIKTEEISEVKMDAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLXXXXXX 2283
               GSGLTNIKTEEISEVKMDAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGL      
Sbjct: 562  ---GSGLTNIKTEEISEVKMDAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVV 618

Query: 2284 XXXXXXXXXXXXKKKQYTSIHHGVVEVDAAVTPEERHLSKMQQNGYENPTYKFFEQMQN 2460
                        KKKQYTSIHHGVVEVDAAVTPEERHLSKMQQNGYENPTYKFFEQMQN
Sbjct: 619  IATVIVITLVMLKKKQYTSIHHGVVEVDAAVTPEERHLSKMQQNGYENPTYKFFEQMQN 677



 Score =  432 bits (1111), Expect = e-121
 Identities = 208/268 (77%), Positives = 212/268 (79%)
 Frame = +1

Query: 151 MLPGLALVLLAAWTARALEVPTDGNAGLLAEPQVAMFCGKLNMHMNVQNGKWESDPSGTK 330
           MLPGLAL+LLAAWTARALEVPTDGNAGLLAEPQ+AMFCG+LNMHMNVQNGKW+SDPSGTK
Sbjct: 1   MLPGLALLLLAAWTARALEVPTDGNAGLLAEPQIAMFCGRLNMHMNVQNGKWDSDPSGTK 60

Query: 331 TCIGTKEGILQYCQEVYPELQITNVVEANQPVTIQNWCKRSRKQCKTHTHIVIPYRCLVG 510
           TCI TKEGILQYCQEVYPELQITNVVEANQPVTIQNWCKR RKQCKTH H VIPYRCLVG
Sbjct: 61  TCIDTKEGILQYCQEVYPELQITNVVEANQPVTIQNWCKRGRKQCKTHPHFVIPYRCLVG 120

Query: 511 EFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLHDYGMLLPCGIDKFR 690
           EFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLHDYGMLLPCGIDKFR
Sbjct: 121 EFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLHDYGMLLPCGIDKFR 180

Query: 691 GVEFVCCPLXXXXXXXXXXXXXXXXXXVWWGGADTDYADGSEDKVVXXXXXXXXXXXXXX 870
           GVEFVCCPL                  VWWGGADTDYADGSEDKVV              
Sbjct: 181 GVEFVCCPLAEESDNVDSADAEEDDSDVWWGGADTDYADGSEDKVVEVAEEEEVAEVEEE 240

Query: 871 XXXXXXXXXXXXXXXXXXXXPYEEATER 954
                               PYEEATER
Sbjct: 241 EADDDEDDEDGDEVEEEAEEPYEEATER 268


  Database: RefSeq49_HP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,297,164
  Number of sequences in database:  32,964
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 111,474,855
Number of extensions: 2970680
Number of successful extensions: 11726
Number of sequences better than 1.0e-05: 39
Number of HSP's gapped: 11560
Number of HSP's successfully gapped: 59
Length of query: 988
Length of database: 18,297,164
Length adjustment: 112
Effective length of query: 876
Effective length of database: 14,605,196
Effective search space: 12794151696
Effective search space used: 12794151696
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-001194
         (2964 letters)

Database: RefSeq49_MP.fasta 
           30,036 sequences; 15,617,559 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001185752.1| amyloid beta A4 protein isoform 1 precursor ...  1330   0.0  
Alignment   gi|NP_001185753.1| amyloid beta A4 protein isoform 3 precursor ...  1292   0.0  
Alignment   gi|NP_001185755.1| amyloid beta A4 protein isoform 6 precursor ...  1283   0.0  
Alignment   gi|NP_001185754.1| amyloid beta A4 protein isoform 5 precursor ...  1245   0.0  
Alignment   gi|NP_031497.2| amyloid beta A4 protein isoform 2 precursor [Mu...   766   0.0  
Alignment   gi|NP_001095925.1| amyloid-like protein 2 isoform a [Mus muscul...   431   e-120
Alignment   gi|NP_001095926.1| amyloid-like protein 2 isoform b [Mus muscul...   356   7e-98
Alignment   gi|NP_033821.1| amyloid-like protein 2 isoform c [Mus musculus].     354   2e-97
Alignment   gi|NP_031493.2| amyloid-like protein 1 [Mus musculus].               242   1e-63
Alignment   gi|NP_035594.1| kunitz-type protease inhibitor 2 isoform a [Mus...    67   6e-11

>ref|NP_001185752.1| amyloid beta A4 protein isoform 1 precursor [Mus musculus].
          Length = 770

 Score = 1330 bits (3443), Expect = 0.0
 Identities = 662/770 (85%), Positives = 666/770 (86%)
 Frame = +1

Query: 151  MLPGLALVLLAAWTARALEVPTDGNAGLLAEPQVAMFCGKLNMHMNVQNGKWESDPSGTK 330
            MLP LAL+LLAAWT RALEVPTDGNAGLLAEPQ+AMFCGKLNMHMNVQNGKWESDPSGTK
Sbjct: 1    MLPSLALLLLAAWTVRALEVPTDGNAGLLAEPQIAMFCGKLNMHMNVQNGKWESDPSGTK 60

Query: 331  TCIGTKEGILQYCQEVYPELQITNVVEANQPVTIQNWCKRSRKQCKTHTHIVIPYRCLVG 510
            TCIGTKEGILQYCQEVYPELQITNVVEANQPVTIQNWCKR RKQCKTHTHIVIPYRCLVG
Sbjct: 61   TCIGTKEGILQYCQEVYPELQITNVVEANQPVTIQNWCKRGRKQCKTHTHIVIPYRCLVG 120

Query: 511  EFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLHDYGMLLPCGIDKFR 690
            EFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLHDYGMLLPCGIDKFR
Sbjct: 121  EFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLHDYGMLLPCGIDKFR 180

Query: 691  GVEFVCCPLXXXXXXXXXXXXXXXXXXVWWGGADTDYADGSEDKVVXXXXXXXXXXXXXX 870
            GVEFVCCPL                  VWWGGADTDYADG EDKVV              
Sbjct: 181  GVEFVCCPLAEESDSVDSADAEEDDSDVWWGGADTDYADGGEDKVVEVAEEEEVADVEEE 240

Query: 871  XXXXXXXXXXXXXXXXXXXXPYEEATERXXXXXXXXXXXXXXXXXXXXXXCSEQAETGPC 1050
                                PYEEATER                      CSEQAETGPC
Sbjct: 241  EADDDEDVEDGDEVEEEAEEPYEEATERTTSTATTTTTTTESVEEVVREVCSEQAETGPC 300

Query: 1051 RAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGSVMSQSLLKTTQEHLPQD 1230
            RAMISRWYFDVTEGKC PFFYGGCGGNRNNFDTEEYCMAVCGSV +QSLLKTT E LPQD
Sbjct: 301  RAMISRWYFDVTEGKCVPFFYGGCGGNRNNFDTEEYCMAVCGSVSTQSLLKTTSEPLPQD 360

Query: 1231 PVKLPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQA 1410
            P KLPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQA
Sbjct: 361  PDKLPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQA 420

Query: 1411 KNLPKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRLALENYITAL 1590
            KNLPKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRLALENYITAL
Sbjct: 421  KNLPKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRLALENYITAL 480

Query: 1591 QAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYER 1770
            QAVPPRP HVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYER
Sbjct: 481  QAVPPRPHHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYER 540

Query: 1771 MNQSLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGNDALMPSLTET 1950
            MNQSLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGNDALMPSLTET
Sbjct: 541  MNQSLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGNDALMPSLTET 600

Query: 1951 KTTVELLPVNGEFSLDDLQPWHPFGVDSVPANTENEVEPVDARPAADRGLTTRPGSGLTN 2130
            KTTVELLPVNGEFSLDDLQPWHPFGVDSVPANTENEVEPVDARPAADRGLTTRPGSGLTN
Sbjct: 601  KTTVELLPVNGEFSLDDLQPWHPFGVDSVPANTENEVEPVDARPAADRGLTTRPGSGLTN 660

Query: 2131 IKTEEISEVKMDAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLXXXXXXXXXXXXXXX 2310
            IKTEEISEVKMDAEF HDSG+EV HQKLVFFAEDVGSNKGAIIGL               
Sbjct: 661  IKTEEISEVKMDAEFGHDSGFEVRHQKLVFFAEDVGSNKGAIIGLMVGGVVIATVIVITL 720

Query: 2311 XXXKKKQYTSIHHGVVEVDAAVTPEERHLSKMQQNGYENPTYKFFEQMQN 2460
               KKKQYTSIHHGVVEVDAAVTPEERHLSKMQQNGYENPTYKFFEQMQN
Sbjct: 721  VMLKKKQYTSIHHGVVEVDAAVTPEERHLSKMQQNGYENPTYKFFEQMQN 770


>ref|NP_001185753.1| amyloid beta A4 protein isoform 3 precursor [Mus musculus].
          Length = 751

 Score = 1292 bits (3343), Expect = 0.0
 Identities = 647/770 (84%), Positives = 650/770 (84%)
 Frame = +1

Query: 151  MLPGLALVLLAAWTARALEVPTDGNAGLLAEPQVAMFCGKLNMHMNVQNGKWESDPSGTK 330
            MLP LAL+LLAAWT RALEVPTDGNAGLLAEPQ+AMFCGKLNMHMNVQNGKWESDPSGTK
Sbjct: 1    MLPSLALLLLAAWTVRALEVPTDGNAGLLAEPQIAMFCGKLNMHMNVQNGKWESDPSGTK 60

Query: 331  TCIGTKEGILQYCQEVYPELQITNVVEANQPVTIQNWCKRSRKQCKTHTHIVIPYRCLVG 510
            TCIGTKEGILQYCQEVYPELQITNVVEANQPVTIQNWCKR RKQCKTHTHIVIPYRCLVG
Sbjct: 61   TCIGTKEGILQYCQEVYPELQITNVVEANQPVTIQNWCKRGRKQCKTHTHIVIPYRCLVG 120

Query: 511  EFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLHDYGMLLPCGIDKFR 690
            EFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLHDYGMLLPCGIDKFR
Sbjct: 121  EFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLHDYGMLLPCGIDKFR 180

Query: 691  GVEFVCCPLXXXXXXXXXXXXXXXXXXVWWGGADTDYADGSEDKVVXXXXXXXXXXXXXX 870
            GVEFVCCPL                  VWWGGADTDYADG EDKVV              
Sbjct: 181  GVEFVCCPLAEESDSVDSADAEEDDSDVWWGGADTDYADGGEDKVVEVAEEEEVADVEEE 240

Query: 871  XXXXXXXXXXXXXXXXXXXXPYEEATERXXXXXXXXXXXXXXXXXXXXXXCSEQAETGPC 1050
                                PYEEATER                      CSEQAETGPC
Sbjct: 241  EADDDEDVEDGDEVEEEAEEPYEEATERTTSTATTTTTTTESVEEVVREVCSEQAETGPC 300

Query: 1051 RAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGSVMSQSLLKTTQEHLPQD 1230
            RAMISRWYFDVTEGKC PFFYGGCGGNRNNFDTEEYCMAVCGSV                
Sbjct: 301  RAMISRWYFDVTEGKCVPFFYGGCGGNRNNFDTEEYCMAVCGSVF--------------- 345

Query: 1231 PVKLPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQA 1410
                PTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQA
Sbjct: 346  ----PTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQA 401

Query: 1411 KNLPKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRLALENYITAL 1590
            KNLPKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRLALENYITAL
Sbjct: 402  KNLPKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRLALENYITAL 461

Query: 1591 QAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYER 1770
            QAVPPRP HVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYER
Sbjct: 462  QAVPPRPHHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYER 521

Query: 1771 MNQSLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGNDALMPSLTET 1950
            MNQSLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGNDALMPSLTET
Sbjct: 522  MNQSLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGNDALMPSLTET 581

Query: 1951 KTTVELLPVNGEFSLDDLQPWHPFGVDSVPANTENEVEPVDARPAADRGLTTRPGSGLTN 2130
            KTTVELLPVNGEFSLDDLQPWHPFGVDSVPANTENEVEPVDARPAADRGLTTRPGSGLTN
Sbjct: 582  KTTVELLPVNGEFSLDDLQPWHPFGVDSVPANTENEVEPVDARPAADRGLTTRPGSGLTN 641

Query: 2131 IKTEEISEVKMDAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLXXXXXXXXXXXXXXX 2310
            IKTEEISEVKMDAEF HDSG+EV HQKLVFFAEDVGSNKGAIIGL               
Sbjct: 642  IKTEEISEVKMDAEFGHDSGFEVRHQKLVFFAEDVGSNKGAIIGLMVGGVVIATVIVITL 701

Query: 2311 XXXKKKQYTSIHHGVVEVDAAVTPEERHLSKMQQNGYENPTYKFFEQMQN 2460
               KKKQYTSIHHGVVEVDAAVTPEERHLSKMQQNGYENPTYKFFEQMQN
Sbjct: 702  VMLKKKQYTSIHHGVVEVDAAVTPEERHLSKMQQNGYENPTYKFFEQMQN 751


>ref|NP_001185755.1| amyloid beta A4 protein isoform 6 precursor [Mus musculus].
          Length = 752

 Score = 1283 bits (3321), Expect = 0.0
 Identities = 644/770 (83%), Positives = 648/770 (84%)
 Frame = +1

Query: 151  MLPGLALVLLAAWTARALEVPTDGNAGLLAEPQVAMFCGKLNMHMNVQNGKWESDPSGTK 330
            MLP LAL+LLAAWT RALEVPTDGNAGLLAEPQ+AMFCGKLNMHMNVQNGKWESDPSGTK
Sbjct: 1    MLPSLALLLLAAWTVRALEVPTDGNAGLLAEPQIAMFCGKLNMHMNVQNGKWESDPSGTK 60

Query: 331  TCIGTKEGILQYCQEVYPELQITNVVEANQPVTIQNWCKRSRKQCKTHTHIVIPYRCLVG 510
            TCIGTKEGILQYCQEVYPELQITNVVEANQPVTIQNWCKR RKQCKTHTHIVIPYRCLVG
Sbjct: 61   TCIGTKEGILQYCQEVYPELQITNVVEANQPVTIQNWCKRGRKQCKTHTHIVIPYRCLVG 120

Query: 511  EFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLHDYGMLLPCGIDKFR 690
            EFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLHDYGMLLPCGIDKFR
Sbjct: 121  EFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLHDYGMLLPCGIDKFR 180

Query: 691  GVEFVCCPLXXXXXXXXXXXXXXXXXXVWWGGADTDYADGSEDKVVXXXXXXXXXXXXXX 870
            GVEFVCCPL                  VWWGGADTDYADG EDKVV              
Sbjct: 181  GVEFVCCPLAEESDSVDSADAEEDDSDVWWGGADTDYADGGEDKVVEVAEEEEVADVEEE 240

Query: 871  XXXXXXXXXXXXXXXXXXXXPYEEATERXXXXXXXXXXXXXXXXXXXXXXCSEQAETGPC 1050
                                PYEEATER                      CSEQAETGPC
Sbjct: 241  EADDDEDVEDGDEVEEEAEEPYEEATERTTSTATTTTTTTESVEEVVREVCSEQAETGPC 300

Query: 1051 RAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGSVMSQSLLKTTQEHLPQD 1230
            RAMISRWYFDVTEGKC PFFYGGCGGNRNNFDTEEYCMAVCGSV +QSLLKTT E LPQD
Sbjct: 301  RAMISRWYFDVTEGKCVPFFYGGCGGNRNNFDTEEYCMAVCGSVSTQSLLKTTSEPLPQD 360

Query: 1231 PVKLPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQA 1410
            P KLPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQA
Sbjct: 361  PDKLPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQA 420

Query: 1411 KNLPKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRLALENYITAL 1590
            KNLPKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRLALENYITAL
Sbjct: 421  KNLPKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRLALENYITAL 480

Query: 1591 QAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYER 1770
            QAVPPRP HVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYER
Sbjct: 481  QAVPPRPHHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYER 540

Query: 1771 MNQSLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGNDALMPSLTET 1950
            MNQSLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGNDALMPSLTET
Sbjct: 541  MNQSLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGNDALMPSLTET 600

Query: 1951 KTTVELLPVNGEFSLDDLQPWHPFGVDSVPANTENEVEPVDARPAADRGLTTRPGSGLTN 2130
            KTTVELLPVNGEFSLDDLQPWHPFGVDSVPANTENE                  GSGLTN
Sbjct: 601  KTTVELLPVNGEFSLDDLQPWHPFGVDSVPANTENE------------------GSGLTN 642

Query: 2131 IKTEEISEVKMDAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLXXXXXXXXXXXXXXX 2310
            IKTEEISEVKMDAEF HDSG+EV HQKLVFFAEDVGSNKGAIIGL               
Sbjct: 643  IKTEEISEVKMDAEFGHDSGFEVRHQKLVFFAEDVGSNKGAIIGLMVGGVVIATVIVITL 702

Query: 2311 XXXKKKQYTSIHHGVVEVDAAVTPEERHLSKMQQNGYENPTYKFFEQMQN 2460
               KKKQYTSIHHGVVEVDAAVTPEERHLSKMQQNGYENPTYKFFEQMQN
Sbjct: 703  VMLKKKQYTSIHHGVVEVDAAVTPEERHLSKMQQNGYENPTYKFFEQMQN 752


>ref|NP_001185754.1| amyloid beta A4 protein isoform 5 precursor [Mus musculus].
          Length = 733

 Score = 1245 bits (3221), Expect = 0.0
 Identities = 629/770 (81%), Positives = 632/770 (82%)
 Frame = +1

Query: 151  MLPGLALVLLAAWTARALEVPTDGNAGLLAEPQVAMFCGKLNMHMNVQNGKWESDPSGTK 330
            MLP LAL+LLAAWT RALEVPTDGNAGLLAEPQ+AMFCGKLNMHMNVQNGKWESDPSGTK
Sbjct: 1    MLPSLALLLLAAWTVRALEVPTDGNAGLLAEPQIAMFCGKLNMHMNVQNGKWESDPSGTK 60

Query: 331  TCIGTKEGILQYCQEVYPELQITNVVEANQPVTIQNWCKRSRKQCKTHTHIVIPYRCLVG 510
            TCIGTKEGILQYCQEVYPELQITNVVEANQPVTIQNWCKR RKQCKTHTHIVIPYRCLVG
Sbjct: 61   TCIGTKEGILQYCQEVYPELQITNVVEANQPVTIQNWCKRGRKQCKTHTHIVIPYRCLVG 120

Query: 511  EFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLHDYGMLLPCGIDKFR 690
            EFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLHDYGMLLPCGIDKFR
Sbjct: 121  EFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLHDYGMLLPCGIDKFR 180

Query: 691  GVEFVCCPLXXXXXXXXXXXXXXXXXXVWWGGADTDYADGSEDKVVXXXXXXXXXXXXXX 870
            GVEFVCCPL                  VWWGGADTDYADG EDKVV              
Sbjct: 181  GVEFVCCPLAEESDSVDSADAEEDDSDVWWGGADTDYADGGEDKVVEVAEEEEVADVEEE 240

Query: 871  XXXXXXXXXXXXXXXXXXXXPYEEATERXXXXXXXXXXXXXXXXXXXXXXCSEQAETGPC 1050
                                PYEEATER                      CSEQAETGPC
Sbjct: 241  EADDDEDVEDGDEVEEEAEEPYEEATERTTSTATTTTTTTESVEEVVREVCSEQAETGPC 300

Query: 1051 RAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGSVMSQSLLKTTQEHLPQD 1230
            RAMISRWYFDVTEGKC PFFYGGCGGNRNNFDTEEYCMAVCGSV                
Sbjct: 301  RAMISRWYFDVTEGKCVPFFYGGCGGNRNNFDTEEYCMAVCGSVF--------------- 345

Query: 1231 PVKLPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQA 1410
                PTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQA
Sbjct: 346  ----PTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQA 401

Query: 1411 KNLPKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRLALENYITAL 1590
            KNLPKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRLALENYITAL
Sbjct: 402  KNLPKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRLALENYITAL 461

Query: 1591 QAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYER 1770
            QAVPPRP HVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYER
Sbjct: 462  QAVPPRPHHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYER 521

Query: 1771 MNQSLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGNDALMPSLTET 1950
            MNQSLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGNDALMPSLTET
Sbjct: 522  MNQSLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGNDALMPSLTET 581

Query: 1951 KTTVELLPVNGEFSLDDLQPWHPFGVDSVPANTENEVEPVDARPAADRGLTTRPGSGLTN 2130
            KTTVELLPVNGEFSLDDLQPWHPFGVDSVPANTENE                  GSGLTN
Sbjct: 582  KTTVELLPVNGEFSLDDLQPWHPFGVDSVPANTENE------------------GSGLTN 623

Query: 2131 IKTEEISEVKMDAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLXXXXXXXXXXXXXXX 2310
            IKTEEISEVKMDAEF HDSG+EV HQKLVFFAEDVGSNKGAIIGL               
Sbjct: 624  IKTEEISEVKMDAEFGHDSGFEVRHQKLVFFAEDVGSNKGAIIGLMVGGVVIATVIVITL 683

Query: 2311 XXXKKKQYTSIHHGVVEVDAAVTPEERHLSKMQQNGYENPTYKFFEQMQN 2460
               KKKQYTSIHHGVVEVDAAVTPEERHLSKMQQNGYENPTYKFFEQMQN
Sbjct: 684  VMLKKKQYTSIHHGVVEVDAAVTPEERHLSKMQQNGYENPTYKFFEQMQN 733


>ref|NP_031497.2| amyloid beta A4 protein isoform 2 precursor [Mus musculus].
          Length = 695

 Score =  766 bits (1978), Expect = 0.0
 Identities = 388/425 (91%), Positives = 394/425 (92%)
 Frame = +1

Query: 1186 SQSLLKTTQEHLPQDPVKLPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRER 1365
            S +   TT     ++ V++PTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRER
Sbjct: 271  STATTTTTTTESVEEVVRVPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRER 330

Query: 1366 MSQVMREWEEAERQAKNLPKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAML 1545
            MSQVMREWEEAERQAKNLPKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAML
Sbjct: 331  MSQVMREWEEAERQAKNLPKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAML 390

Query: 1546 NDRRRLALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQ 1725
            NDRRRLALENYITALQAVPPRP HVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQ
Sbjct: 391  NDRRRLALENYITALQAVPPRPHHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQ 450

Query: 1726 IRSQVMTHLRVIYERMNQSLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPR 1905
            IRSQVMTHLRVIYERMNQSLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPR
Sbjct: 451  IRSQVMTHLRVIYERMNQSLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPR 510

Query: 1906 ISYGNDALMPSLTETKTTVELLPVNGEFSLDDLQPWHPFGVDSVPANTENEVEPVDARPA 2085
            ISYGNDALMPSLTETKTTVELLPVNGEFSLDDLQPWHPFGVDSVPANTENEVEPVDARPA
Sbjct: 511  ISYGNDALMPSLTETKTTVELLPVNGEFSLDDLQPWHPFGVDSVPANTENEVEPVDARPA 570

Query: 2086 ADRGLTTRPGSGLTNIKTEEISEVKMDAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGL 2265
            ADRGLTTRPGSGLTNIKTEEISEVKMDAEF HDSG+EV HQKLVFFAEDVGSNKGAIIGL
Sbjct: 571  ADRGLTTRPGSGLTNIKTEEISEVKMDAEFGHDSGFEVRHQKLVFFAEDVGSNKGAIIGL 630

Query: 2266 XXXXXXXXXXXXXXXXXXKKKQYTSIHHGVVEVDAAVTPEERHLSKMQQNGYENPTYKFF 2445
                              KKKQYTSIHHGVVEVDAAVTPEERHLSKMQQNGYENPTYKFF
Sbjct: 631  MVGGVVIATVIVITLVMLKKKQYTSIHHGVVEVDAAVTPEERHLSKMQQNGYENPTYKFF 690

Query: 2446 EQMQN 2460
            EQMQN
Sbjct: 691  EQMQN 695



 Score =  436 bits (1120), Expect = e-122
 Identities = 210/268 (78%), Positives = 212/268 (79%)
 Frame = +1

Query: 151 MLPGLALVLLAAWTARALEVPTDGNAGLLAEPQVAMFCGKLNMHMNVQNGKWESDPSGTK 330
           MLP LAL+LLAAWT RALEVPTDGNAGLLAEPQ+AMFCGKLNMHMNVQNGKWESDPSGTK
Sbjct: 1   MLPSLALLLLAAWTVRALEVPTDGNAGLLAEPQIAMFCGKLNMHMNVQNGKWESDPSGTK 60

Query: 331 TCIGTKEGILQYCQEVYPELQITNVVEANQPVTIQNWCKRSRKQCKTHTHIVIPYRCLVG 510
           TCIGTKEGILQYCQEVYPELQITNVVEANQPVTIQNWCKR RKQCKTHTHIVIPYRCLVG
Sbjct: 61  TCIGTKEGILQYCQEVYPELQITNVVEANQPVTIQNWCKRGRKQCKTHTHIVIPYRCLVG 120

Query: 511 EFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLHDYGMLLPCGIDKFR 690
           EFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLHDYGMLLPCGIDKFR
Sbjct: 121 EFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLHDYGMLLPCGIDKFR 180

Query: 691 GVEFVCCPLXXXXXXXXXXXXXXXXXXVWWGGADTDYADGSEDKVVXXXXXXXXXXXXXX 870
           GVEFVCCPL                  VWWGGADTDYADG EDKVV              
Sbjct: 181 GVEFVCCPLAEESDSVDSADAEEDDSDVWWGGADTDYADGGEDKVVEVAEEEEVADVEEE 240

Query: 871 XXXXXXXXXXXXXXXXXXXXPYEEATER 954
                               PYEEATER
Sbjct: 241 EADDDEDVEDGDEVEEEAEEPYEEATER 268


>ref|NP_001095925.1| amyloid-like protein 2 isoform a [Mus musculus].
          Length = 751

 Score =  431 bits (1108), Expect = e-120
 Identities = 234/484 (48%), Positives = 306/484 (63%), Gaps = 5/484 (1%)
 Frame = +1

Query: 1021 CSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGSVMSQSLL 1200
            CS++A TGPCRA++ RWYFD+++GKC  F YGGCGGNRNNF++E+YCMAVC +++     
Sbjct: 310  CSQEAMTGPCRAVMPRWYFDLSKGKCVRFIYGGCGGNRNNFESEDYCMAVCKAMIP---- 365

Query: 1201 KTTQEHLPQDPVKLPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVM 1380
                      P  LPT      + VD Y ET  D+NEHA FQKAKE+LE +HR RM +V 
Sbjct: 366  ----------PTPLPT------NDVDVYFETSADDNEHARFQKAKEQLEIRHRNRMDRVK 409

Query: 1381 REWEEAERQAKNLPKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRR 1560
            +EWEEAE QAKNLPK +++ +IQHFQ  V++LE+EAA+E+QQLVETH+ARVEAMLNDRRR
Sbjct: 410  KEWEEAELQAKNLPKTERQTLIQHFQAMVKALEKEAASEKQQLVETHLARVEAMLNDRRR 469

Query: 1561 LALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQV 1740
            +ALENY+ ALQ+ PPRP  +   L++YVRAE KDR HT++H++HV  VDP+KAAQ++SQV
Sbjct: 470  IALENYLAALQSDPPRPHRILQALRRYVRAENKDRLHTIRHYQHVLAVDPEKAAQMKSQV 529

Query: 1741 MTHLRVIYERMNQSLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGN 1920
            MTHL VI ER NQSLSLLY VP VA+EIQ+E+DELLQ+++       A+M          
Sbjct: 530  MTHLHVIEERRNQSLSLLYKVPYVAQEIQEEIDELLQEQR-------ADM---------- 572

Query: 1921 DALMPSLTETKTTVELLPVNGEFSLDDLQPWHPFGVDSVPANTENE----VEPVDARPAA 2088
            D    S++E    V +     E  +    P HPF     P+ +ENE     E       A
Sbjct: 573  DQFTSSISENPVDVRVSSEESE-EIPPFHPLHPF-----PSLSENEGSGMAEQDGGLIGA 626

Query: 2089 DRGLTTRPGSGLTNIKTEEISEVK-MDAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGL 2265
            +  +         N+  +E  +VK M        G E   + +    ED   +  A+IGL
Sbjct: 627  EEKVINSKNKMDENMVIDETLDVKEMIFNAERVGGLEEEPESVGPLREDFSLSSNALIGL 686

Query: 2266 XXXXXXXXXXXXXXXXXXKKKQYTSIHHGVVEVDAAVTPEERHLSKMQQNGYENPTYKFF 2445
                              +K+QY +I HG+VEVD  +TPEERHL+KMQ +GYENPTYK+ 
Sbjct: 687  LVIAVAIATVIVISLVMLRKRQYGTISHGIVEVDPMLTPEERHLNKMQNHGYENPTYKYL 746

Query: 2446 EQMQ 2457
            EQMQ
Sbjct: 747  EQMQ 750



 Score =  267 bits (683), Expect = 3e-71
 Identities = 123/202 (60%), Positives = 154/202 (76%), Gaps = 3/202 (1%)
 Frame = +1

Query: 118 SSALGAPRRVAMLPGLALVLLAAWTARALEVPTDGNAGL---LAEPQVAMFCGKLNMHMN 288
           ++A  A  ++ +L  L L   AA  A  +E     NAG    +AEPQ+AMFCGKLNMH+N
Sbjct: 6   TAAAAATGKLLVLLLLGLTAPAAALAGYIEALA-ANAGTGFAVAEPQIAMFCGKLNMHVN 64

Query: 289 VQNGKWESDPSGTKTCIGTKEGILQYCQEVYPELQITNVVEANQPVTIQNWCKRSRKQCK 468
           +Q GKWE DP+GTK+C+GTKE +LQYCQE+YPELQITNV+EANQPV I +WC+R ++QCK
Sbjct: 65  IQTGKWEPDPTGTKSCLGTKEEVLQYCQEIYPELQITNVMEANQPVNIDSWCRRDKRQCK 124

Query: 469 THTHIVIPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLH 648
             +HIVIP++CLVGEFVSD LLVPD C+F HQERM+VCE H  WHT+ KE C  +   L+
Sbjct: 125 --SHIVIPFKCLVGEFVSDVLLVPDNCQFFHQERMEVCEKHQRWHTLVKEACLTEGLTLY 182

Query: 649 DYGMLLPCGIDKFRGVEFVCCP 714
            YGMLLPCG+D+F G E+VCCP
Sbjct: 183 SYGMLLPCGVDQFHGTEYVCCP 204


>ref|NP_001095926.1| amyloid-like protein 2 isoform b [Mus musculus].
          Length = 707

 Score =  356 bits (913), Expect = 7e-98
 Identities = 205/427 (48%), Positives = 266/427 (62%), Gaps = 19/427 (4%)
 Frame = +1

Query: 1234 VKLPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQAK 1413
            VK+P T   T D VD Y ET  D+NEHA FQKAKE+LE +HR RM +V +EWEEAE QAK
Sbjct: 306  VKVPPTPLPTND-VDVYFETSADDNEHARFQKAKEQLEIRHRNRMDRVKKEWEEAELQAK 364

Query: 1414 NLPKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRLALENYITALQ 1593
            NLPK +++ +IQHFQ  V++LE+EAA+E+QQLVETH+ARVEAMLNDRRR+ALENY+ ALQ
Sbjct: 365  NLPKTERQTLIQHFQAMVKALEKEAASEKQQLVETHLARVEAMLNDRRRIALENYLAALQ 424

Query: 1594 AVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYERM 1773
            + PPRP  +   L++YVRAE KDR HT++H++HV  VDP+KAAQ++SQVMTHL VI ER 
Sbjct: 425  SDPPRPHRILQALRRYVRAENKDRLHTIRHYQHVLAVDPEKAAQMKSQVMTHLHVIEERR 484

Query: 1774 NQSLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGNDALMPSLTETK 1953
            NQSLSLLY VP VA+EIQ+E+DELLQ+++       A+M          D    S++E  
Sbjct: 485  NQSLSLLYKVPYVAQEIQEEIDELLQEQR-------ADM----------DQFTSSISENP 527

Query: 1954 TTVELLPVNGEFSLDDLQPWHPFGVDSVPANTENE-VEPVDARPAADRGLTTRPGSGLTN 2130
              V +     E  +    P HPF     P+ +ENE  +P    P            GL  
Sbjct: 528  VDVRVSSEESE-EIPPFHPLHPF-----PSLSENEDTQPELYHPMKKGSGMAEQDGGLIG 581

Query: 2131 IKTEEI-SEVKMDAEFRHDSGYEVHHQKLVFFAEDVGS-----------------NKGAI 2256
             + + I S+ KMD     D   +V  ++++F AE VG                  +  A+
Sbjct: 582  AEEKVINSKNKMDENMVIDETLDV--KEMIFNAERVGGLEEEPESVGPLREDFSLSSNAL 639

Query: 2257 IGLXXXXXXXXXXXXXXXXXXKKKQYTSIHHGVVEVDAAVTPEERHLSKMQQNGYENPTY 2436
            IGL                  +K+QY +I HG+VEVD  +TPEERHL+KMQ +GYENPTY
Sbjct: 640  IGLLVIAVAIATVIVISLVMLRKRQYGTISHGIVEVDPMLTPEERHLNKMQNHGYENPTY 699

Query: 2437 KFFEQMQ 2457
            K+ EQMQ
Sbjct: 700  KYLEQMQ 706



 Score =  267 bits (683), Expect = 3e-71
 Identities = 123/202 (60%), Positives = 154/202 (76%), Gaps = 3/202 (1%)
 Frame = +1

Query: 118 SSALGAPRRVAMLPGLALVLLAAWTARALEVPTDGNAGL---LAEPQVAMFCGKLNMHMN 288
           ++A  A  ++ +L  L L   AA  A  +E     NAG    +AEPQ+AMFCGKLNMH+N
Sbjct: 6   TAAAAATGKLLVLLLLGLTAPAAALAGYIEALA-ANAGTGFAVAEPQIAMFCGKLNMHVN 64

Query: 289 VQNGKWESDPSGTKTCIGTKEGILQYCQEVYPELQITNVVEANQPVTIQNWCKRSRKQCK 468
           +Q GKWE DP+GTK+C+GTKE +LQYCQE+YPELQITNV+EANQPV I +WC+R ++QCK
Sbjct: 65  IQTGKWEPDPTGTKSCLGTKEEVLQYCQEIYPELQITNVMEANQPVNIDSWCRRDKRQCK 124

Query: 469 THTHIVIPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLH 648
             +HIVIP++CLVGEFVSD LLVPD C+F HQERM+VCE H  WHT+ KE C  +   L+
Sbjct: 125 --SHIVIPFKCLVGEFVSDVLLVPDNCQFFHQERMEVCEKHQRWHTLVKEACLTEGLTLY 182

Query: 649 DYGMLLPCGIDKFRGVEFVCCP 714
            YGMLLPCG+D+F G E+VCCP
Sbjct: 183 SYGMLLPCGVDQFHGTEYVCCP 204


>ref|NP_033821.1| amyloid-like protein 2 isoform c [Mus musculus].
          Length = 695

 Score =  354 bits (909), Expect = 2e-97
 Identities = 200/413 (48%), Positives = 259/413 (62%), Gaps = 5/413 (1%)
 Frame = +1

Query: 1234 VKLPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQAK 1413
            VK+P T   T D VD Y ET  D+NEHA FQKAKE+LE +HR RM +V +EWEEAE QAK
Sbjct: 306  VKVPPTPLPTND-VDVYFETSADDNEHARFQKAKEQLEIRHRNRMDRVKKEWEEAELQAK 364

Query: 1414 NLPKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRLALENYITALQ 1593
            NLPK +++ +IQHFQ  V++LE+EAA+E+QQLVETH+ARVEAMLNDRRR+ALENY+ ALQ
Sbjct: 365  NLPKTERQTLIQHFQAMVKALEKEAASEKQQLVETHLARVEAMLNDRRRIALENYLAALQ 424

Query: 1594 AVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYERM 1773
            + PPRP  +   L++YVRAE KDR HT++H++HV  VDP+KAAQ++SQVMTHL VI ER 
Sbjct: 425  SDPPRPHRILQALRRYVRAENKDRLHTIRHYQHVLAVDPEKAAQMKSQVMTHLHVIEERR 484

Query: 1774 NQSLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGNDALMPSLTETK 1953
            NQSLSLLY VP VA+EIQ+E+DELLQ+++       A+M          D    S++E  
Sbjct: 485  NQSLSLLYKVPYVAQEIQEEIDELLQEQR-------ADM----------DQFTSSISENP 527

Query: 1954 TTVELLPVNGEFSLDDLQPWHPFGVDSVPANTENE----VEPVDARPAADRGLTTRPGSG 2121
              V +     E  +    P HPF     P+ +ENE     E       A+  +       
Sbjct: 528  VDVRVSSEESE-EIPPFHPLHPF-----PSLSENEGSGMAEQDGGLIGAEEKVINSKNKM 581

Query: 2122 LTNIKTEEISEVK-MDAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLXXXXXXXXXXX 2298
              N+  +E  +VK M        G E   + +    ED   +  A+IGL           
Sbjct: 582  DENMVIDETLDVKEMIFNAERVGGLEEEPESVGPLREDFSLSSNALIGLLVIAVAIATVI 641

Query: 2299 XXXXXXXKKKQYTSIHHGVVEVDAAVTPEERHLSKMQQNGYENPTYKFFEQMQ 2457
                   +K+QY +I HG+VEVD  +TPEERHL+KMQ +GYENPTYK+ EQMQ
Sbjct: 642  VISLVMLRKRQYGTISHGIVEVDPMLTPEERHLNKMQNHGYENPTYKYLEQMQ 694



 Score =  267 bits (683), Expect = 3e-71
 Identities = 123/202 (60%), Positives = 154/202 (76%), Gaps = 3/202 (1%)
 Frame = +1

Query: 118 SSALGAPRRVAMLPGLALVLLAAWTARALEVPTDGNAGL---LAEPQVAMFCGKLNMHMN 288
           ++A  A  ++ +L  L L   AA  A  +E     NAG    +AEPQ+AMFCGKLNMH+N
Sbjct: 6   TAAAAATGKLLVLLLLGLTAPAAALAGYIEALA-ANAGTGFAVAEPQIAMFCGKLNMHVN 64

Query: 289 VQNGKWESDPSGTKTCIGTKEGILQYCQEVYPELQITNVVEANQPVTIQNWCKRSRKQCK 468
           +Q GKWE DP+GTK+C+GTKE +LQYCQE+YPELQITNV+EANQPV I +WC+R ++QCK
Sbjct: 65  IQTGKWEPDPTGTKSCLGTKEEVLQYCQEIYPELQITNVMEANQPVNIDSWCRRDKRQCK 124

Query: 469 THTHIVIPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLH 648
             +HIVIP++CLVGEFVSD LLVPD C+F HQERM+VCE H  WHT+ KE C  +   L+
Sbjct: 125 --SHIVIPFKCLVGEFVSDVLLVPDNCQFFHQERMEVCEKHQRWHTLVKEACLTEGLTLY 182

Query: 649 DYGMLLPCGIDKFRGVEFVCCP 714
            YGMLLPCG+D+F G E+VCCP
Sbjct: 183 SYGMLLPCGVDQFHGTEYVCCP 204


>ref|NP_031493.2| amyloid-like protein 1 [Mus musculus].
          Length = 654

 Score =  242 bits (617), Expect = 1e-63
 Identities = 151/416 (36%), Positives = 222/416 (53%), Gaps = 4/416 (0%)
 Frame = +1

Query: 1216 HLPQDPVKLPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEE 1395
            H P    ++  T   T D VD Y   PG+  EH  F +AK  LE +   ++++VMREW  
Sbjct: 280  HTPVMVSRVTPTPRPT-DGVDVYFGMPGEIGEHEGFLRAKMDLEERRMRQINEVMREWAM 338

Query: 1396 AERQAKNLPKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRLALEN 1575
            A+ Q+KNLPKAD++A+ +HFQ  +++LE++ + ERQ+LVETH  RV A++ND+RR ALE 
Sbjct: 339  ADSQSKNLPKADRQALNEHFQSILQTLEEQVSGERQRLVETHATRVIALINDQRRAALEG 398

Query: 1576 YITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLR 1755
            ++ ALQ  PP+   V   L++Y+RAEQK+++HTL+H++HV  VDP+KA Q+R QV THL+
Sbjct: 399  FLAALQGDPPQAERVLMALRRYLRAEQKEQRHTLRHYQHVAAVDPEKAQQMRFQVQTHLQ 458

Query: 1756 VIYERMNQSLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGNDALMP 1935
            VI ERMNQSL LL   P +A+E++ ++ ELL  E                       L P
Sbjct: 459  VIEERMNQSLGLLDQNPHLAQELRPQIQELLLAEH----------------------LGP 496

Query: 1936 SLTETKTTVELLPVNGEFSLDDLQPWHPFGVDSVPANTENEVEPVDARPAADRGLTTRPG 2115
            S  +       +P +       LQP             E++ +P    P   +G T +  
Sbjct: 497  SELDAS-----VPGSSSEDKGSLQP------------PESKDDPPVTLP---KGSTDQES 536

Query: 2116 SGLTNIKTEEISEVKMDAEFRHDSGYEVHH---QKLVFFAEDVGSNKGAIIG-LXXXXXX 2283
            S     K   + + +         G+  H    Q+        G ++ A+ G L      
Sbjct: 537  SSSGREKLTPLEQYEQKVNASAPRGFPFHSSDIQRDELAPSGTGVSREALSGLLIMGAGG 596

Query: 2284 XXXXXXXXXXXXKKKQYTSIHHGVVEVDAAVTPEERHLSKMQQNGYENPTYKFFEQ 2451
                        KKK Y +I HGVVEVD  +T EE+ L ++Q++GYENPTY+F E+
Sbjct: 597  GSLIVLSLLLLRKKKPYGTISHGVVEVDPMLTLEEQQLRELQRHGYENPTYRFLEE 652



 Score =  183 bits (464), Expect = 8e-46
 Identities = 89/195 (45%), Positives = 125/195 (64%), Gaps = 2/195 (1%)
 Frame = +1

Query: 136 PRRVAMLPGLALVLLAAWTARA-LEVPTDGNAGLLAEPQVAMFCGKLNMHMNVQNGKWES 312
           P  + +L  L+L+LL A  A   L V +   A      QVA  CG+L +H +++ G+WE 
Sbjct: 17  PPPLPLLLPLSLLLLRAQLAVGNLAVGSPSAAEAPGSAQVAGLCGRLTLHRDLRTGRWEP 76

Query: 313 DPSGTKTCIGTKEGILQYCQEVYPELQITNVVEANQPVTIQNWCKRSRK-QCKTHTHIVI 489
           DP  ++ C+   + +L+YC+++YPEL I  V +A Q + ++ WC  +R  +C    H V+
Sbjct: 77  DPQRSRRCLLDPQRVLEYCRQMYPELHIARVEQAAQAIPMERWCGGTRSGRCAHPHHEVV 136

Query: 490 PYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLHDYGMLLP 669
           P+ CL GEFVS+ALLVP+ C+FLHQERMD CE+    H  A+E CS +   LH  GMLLP
Sbjct: 137 PFHCLPGEFVSEALLVPEGCRFLHQERMDQCESSTRRHQEAQEACSSQGLILHGSGMLLP 196

Query: 670 CGIDKFRGVEFVCCP 714
           CG D+FRGVE+VCCP
Sbjct: 197 CGSDRFRGVEYVCCP 211


>ref|NP_035594.1| kunitz-type protease inhibitor 2 isoform a [Mus musculus].
          Length = 252

 Score = 67.4 bits (163), Expect = 6e-11
 Identities = 25/54 (46%), Positives = 34/54 (62%)
 Frame = +1

Query: 1021 CSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGSV 1182
            C      G CRA I RW++++T+G C PF YGGC GN NN+ ++E C+  C  V
Sbjct: 38   CGVSKVVGKCRASIPRWWYNITDGSCQPFVYGGCEGNGNNYQSKEECLDKCAGV 91



 Score = 65.9 bits (159), Expect = 2e-10
 Identities = 25/51 (49%), Positives = 33/51 (64%)
 Frame = +1

Query: 1021 CSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVC 1173
            C  +A TGPCRA   RWY+D  +  C  F YGGC GN+N++ ++E CM  C
Sbjct: 133  CVPKAVTGPCRAAFPRWYYDTEKNSCISFIYGGCRGNKNSYLSQEACMQHC 183


  Database: RefSeq49_MP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 15,617,559
  Number of sequences in database:  30,036
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 95,064,405
Number of extensions: 2532942
Number of successful extensions: 10035
Number of sequences better than 1.0e-05: 31
Number of HSP's gapped: 9916
Number of HSP's successfully gapped: 43
Length of query: 988
Length of database: 15,617,559
Length adjustment: 111
Effective length of query: 877
Effective length of database: 12,283,563
Effective search space: 10772684751
Effective search space used: 10772684751
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-001194
         (2964 letters)

Database: RefSeq49_SP.fasta 
           24,897 sequences; 11,343,932 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_999537.1| amyloid beta A4 protein [Sus scrofa].               1362   0.0  
Alignment   gi|XP_003358940.1| PREDICTED: amyloid beta A4 protein-like [Sus...   690   0.0  
Alignment   gi|XP_003357409.1| PREDICTED: amyloid-like protein 2, partial [...   384   e-106
Alignment   gi|XP_003127129.1| PREDICTED: amyloid-like protein 1-like [Sus ...   142   1e-33
Alignment   gi|XP_003359739.1| PREDICTED: collagen alpha-3(VI) chain [Sus s...    69   2e-11
Alignment   gi|XP_001928130.2| PREDICTED: collagen alpha-3(VI) chain isofor...    69   2e-11
Alignment   gi|XP_001928122.2| PREDICTED: collagen alpha-3(VI) chain isofor...    69   2e-11
Alignment   gi|XP_003127156.1| PREDICTED: kunitz-type protease inhibitor 2-...    67   7e-11
Alignment   gi|NP_001128730.1| hypothetical protein LOC100155068 [Sus scrof...    62   2e-09
Alignment   gi|NP_001157478.1| protein AMBP precursor [Sus scrofa].               61   4e-09

>ref|NP_999537.1| amyloid beta A4 protein [Sus scrofa].
          Length = 770

 Score = 1362 bits (3524), Expect = 0.0
 Identities = 678/770 (88%), Positives = 678/770 (88%)
 Frame = +1

Query: 151  MLPGLALVLLAAWTARALEVPTDGNAGLLAEPQVAMFCGKLNMHMNVQNGKWESDPSGTK 330
            MLPGLALVLLAAWTARALEVPTDGNAGLLAEPQVAMFCGKLNMHMNVQNGKWESDPSGTK
Sbjct: 1    MLPGLALVLLAAWTARALEVPTDGNAGLLAEPQVAMFCGKLNMHMNVQNGKWESDPSGTK 60

Query: 331  TCIGTKEGILQYCQEVYPELQITNVVEANQPVTIQNWCKRSRKQCKTHTHIVIPYRCLVG 510
            TCIGTKEGILQYCQEVYPELQITNVVEANQPVTIQNWCKRSRKQCKTHTHIVIPYRCLVG
Sbjct: 61   TCIGTKEGILQYCQEVYPELQITNVVEANQPVTIQNWCKRSRKQCKTHTHIVIPYRCLVG 120

Query: 511  EFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLHDYGMLLPCGIDKFR 690
            EFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLHDYGMLLPCGIDKFR
Sbjct: 121  EFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLHDYGMLLPCGIDKFR 180

Query: 691  GVEFVCCPLXXXXXXXXXXXXXXXXXXVWWGGADTDYADGSEDKVVXXXXXXXXXXXXXX 870
            GVEFVCCPL                  VWWGGADTDYADGSEDKVV              
Sbjct: 181  GVEFVCCPLAEESDNIDSADAEEDDSDVWWGGADTDYADGSEDKVVEVAEEEEVADVEEE 240

Query: 871  XXXXXXXXXXXXXXXXXXXXPYEEATERXXXXXXXXXXXXXXXXXXXXXXCSEQAETGPC 1050
                                PYEEATER                      CSEQAETGPC
Sbjct: 241  EAEDDEDDEDGDEVEEEAEEPYEEATERTTSIATTTTTTTESVEEVVREVCSEQAETGPC 300

Query: 1051 RAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGSVMSQSLLKTTQEHLPQD 1230
            RAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGSVMSQSLLKTTQEHLPQD
Sbjct: 301  RAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGSVMSQSLLKTTQEHLPQD 360

Query: 1231 PVKLPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQA 1410
            PVKLPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQA
Sbjct: 361  PVKLPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQA 420

Query: 1411 KNLPKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRLALENYITAL 1590
            KNLPKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRLALENYITAL
Sbjct: 421  KNLPKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRLALENYITAL 480

Query: 1591 QAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYER 1770
            QAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYER
Sbjct: 481  QAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYER 540

Query: 1771 MNQSLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGNDALMPSLTET 1950
            MNQSLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGNDALMPSLTET
Sbjct: 541  MNQSLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGNDALMPSLTET 600

Query: 1951 KTTVELLPVNGEFSLDDLQPWHPFGVDSVPANTENEVEPVDARPAADRGLTTRPGSGLTN 2130
            KTTVELLPVNGEFSLDDLQPWHPFGVDSVPANTENEVEPVDARPAADRGLTTRPGSGLTN
Sbjct: 601  KTTVELLPVNGEFSLDDLQPWHPFGVDSVPANTENEVEPVDARPAADRGLTTRPGSGLTN 660

Query: 2131 IKTEEISEVKMDAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLXXXXXXXXXXXXXXX 2310
            IKTEEISEVKMDAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGL               
Sbjct: 661  IKTEEISEVKMDAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIATVIVITL 720

Query: 2311 XXXKKKQYTSIHHGVVEVDAAVTPEERHLSKMQQNGYENPTYKFFEQMQN 2460
               KKKQYTSIHHGVVEVDAAVTPEERHLSKMQQNGYENPTYKFFEQMQN
Sbjct: 721  VMLKKKQYTSIHHGVVEVDAAVTPEERHLSKMQQNGYENPTYKFFEQMQN 770


>ref|XP_003358940.1| PREDICTED: amyloid beta A4 protein-like [Sus scrofa].
          Length = 422

 Score =  690 bits (1780), Expect = 0.0
 Identities = 343/347 (98%), Positives = 343/347 (98%)
 Frame = +1

Query: 1021 CSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGSVMSQSLL 1200
            CSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGSVMSQSLL
Sbjct: 6    CSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGSVMSQSLL 65

Query: 1201 KTTQEHLPQDPVKLPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVM 1380
            KTTQEHLPQDPVKLPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVM
Sbjct: 66   KTTQEHLPQDPVKLPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVM 125

Query: 1381 REWEEAERQAKNLPKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRR 1560
            REWEEAERQAKNLPKADKKAVIQ    KVESLEQEAANERQQLVETHMARVEAMLNDRRR
Sbjct: 126  REWEEAERQAKNLPKADKKAVIQ----KVESLEQEAANERQQLVETHMARVEAMLNDRRR 181

Query: 1561 LALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQV 1740
            LALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQV
Sbjct: 182  LALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQV 241

Query: 1741 MTHLRVIYERMNQSLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGN 1920
            MTHLRVIYERMNQSLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGN
Sbjct: 242  MTHLRVIYERMNQSLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGN 301

Query: 1921 DALMPSLTETKTTVELLPVNGEFSLDDLQPWHPFGVDSVPANTENEV 2061
            DALMPSLTETKTTVELLPVNGEFSLDDLQPWHPFGVDSVPANTENEV
Sbjct: 302  DALMPSLTETKTTVELLPVNGEFSLDDLQPWHPFGVDSVPANTENEV 348


>ref|XP_003357409.1| PREDICTED: amyloid-like protein 2, partial [Sus scrofa].
          Length = 744

 Score =  384 bits (986), Expect = e-106
 Identities = 215/458 (46%), Positives = 286/458 (62%), Gaps = 10/458 (2%)
 Frame = +1

Query: 1021 CSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGSVMSQSLL 1200
            CS++A TGPCRA++ RWYFD+++GKC  F YGGCGGNRNNF++E+YCMAVC +++     
Sbjct: 317  CSQEALTGPCRAVMPRWYFDLSKGKCVRFIYGGCGGNRNNFESEDYCMAVCKAMIP---- 372

Query: 1201 KTTQEHLPQDPVKLPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVM 1380
                      P  LPT      + VD Y ET  D+NEHA FQKAKE+LE +HR RM +V 
Sbjct: 373  ----------PTPLPT------NDVDVYFETSADDNEHARFQKAKEQLEIRHRNRMDRVK 416

Query: 1381 REWEEAERQAKNLPKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRR 1560
            +EWEEAE QAKNLPKA+++ +IQHFQ  V++LE+EAA+E+QQLVETH+ARVEAMLNDRRR
Sbjct: 417  KEWEEAELQAKNLPKAERQTLIQHFQAMVKALEKEAASEKQQLVETHLARVEAMLNDRRR 476

Query: 1561 LALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQV 1740
            +ALENY+ ALQA PPRP  +   L++YVRAE KDR HT++H++HV  VDP+KAAQ++SQV
Sbjct: 477  VALENYLAALQADPPRPHRILQALRRYVRAENKDRLHTIRHYQHVLAVDPEKAAQMKSQV 536

Query: 1741 MTHLRVIYERMNQSLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEP---RIS 1911
            MTHL VI ER NQSLSLLY VP VA+EIQ+E+DELLQ+++   D   A++   P   R+S
Sbjct: 537  MTHLHVIEERRNQSLSLLYKVPYVAQEIQEEIDELLQEQRADMDQFTASISETPVDVRVS 596

Query: 1912 YGNDALMPSLTETKTTVELLPVNGEFSLDDLQP--WHPFGVDSVPANTEN-----EVEPV 2070
                  MP L         LP N     +D QP  +HP    S     +      E + +
Sbjct: 597  SEESDEMPPLYPLH-PFPSLPEN-----EDPQPELYHPVKKGSALGEQDGGLIGAEEKVI 650

Query: 2071 DARPAADRGLTTRPGSGLTNIKTEEISEVKMDAEFRHDSGYEVHHQKLVFFAEDVGSNKG 2250
            +++   D  +           +T ++ E+  +AE     G E   +      ED G +  
Sbjct: 651  NSKKKVDENMVID--------ETLDVKEMIFNAE--RVGGLEEAPESTGPLREDFGLSSS 700

Query: 2251 AIIGLXXXXXXXXXXXXXXXXXXKKKQYTSIHHGVVEV 2364
            A+IGL                  +K+QY +I HG+VEV
Sbjct: 701  ALIGLLVIAVAIATVIVISLVMLRKRQYGTISHGIVEV 738



 Score =  268 bits (685), Expect = 1e-71
 Identities = 124/202 (61%), Positives = 153/202 (75%), Gaps = 3/202 (1%)
 Frame = +1

Query: 118 SSALGAPRRVAMLPGLALVLLAAWTARALEVPTDGNAGL---LAEPQVAMFCGKLNMHMN 288
           ++A  A  +  +L  L L   AA  A  +E     NAG    +AEPQ+AMFCGKLNMH+N
Sbjct: 6   TAAAAATGKFLLLLLLGLSAPAAALAGYIEALA-ANAGTGFAVAEPQIAMFCGKLNMHVN 64

Query: 289 VQNGKWESDPSGTKTCIGTKEGILQYCQEVYPELQITNVVEANQPVTIQNWCKRSRKQCK 468
           +Q GKWE DP+GTK+C GTKE +LQYCQE+YPELQITNV+EANQPV + NWC+R +KQCK
Sbjct: 65  IQTGKWEPDPTGTKSCFGTKEEVLQYCQEMYPELQITNVMEANQPVRVDNWCRRDKKQCK 124

Query: 469 THTHIVIPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLH 648
             +H+VIP +CLVGEFVSD LLVP+KC+F H+ERM+VCE H HWHTV KE C  +   L+
Sbjct: 125 --SHVVIPSKCLVGEFVSDVLLVPEKCQFFHKERMEVCENHQHWHTVVKEACLTQGMTLY 182

Query: 649 DYGMLLPCGIDKFRGVEFVCCP 714
            YGMLLPCG+D+F G E+VCCP
Sbjct: 183 SYGMLLPCGVDQFHGTEYVCCP 204


>ref|XP_003127129.1| PREDICTED: amyloid-like protein 1-like [Sus scrofa].
          Length = 181

 Score =  142 bits (357), Expect = 1e-33
 Identities = 66/127 (51%), Positives = 86/127 (67%), Gaps = 1/127 (0%)
 Frame = +1

Query: 337 IGTKEGILQYCQEVYPELQITNVVEANQPVTIQNWCKRSRK-QCKTHTHIVIPYRCLVGE 513
           +G+  G      E+YPELQI  V +A Q + ++ WC  +R  +C    H V+P+RCL GE
Sbjct: 31  VGSLAGGSPSAAEMYPELQIARVEQATQAIPMEQWCGDARGGRCAHPHHQVVPFRCLPGE 90

Query: 514 FVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLHDYGMLLPCGIDKFRG 693
           FVS+ALLVP+ C+FLHQERMD CE+    H  A+E C+ +   LH  GMLLPCG D+FRG
Sbjct: 91  FVSEALLVPEGCRFLHQERMDQCESSTRRHQEAQEACNSQGLILHGSGMLLPCGADRFRG 150

Query: 694 VEFVCCP 714
           VE+VCCP
Sbjct: 151 VEYVCCP 157


>ref|XP_003359739.1| PREDICTED: collagen alpha-3(VI) chain [Sus scrofa].
          Length = 2571

 Score = 68.6 bits (166), Expect = 2e-11
 Identities = 27/55 (49%), Positives = 33/55 (60%)
 Frame = +1

Query: 1021 CSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGSVM 1185
            C    + G CR  I +WY D   G CA F+YGGCGGN N FD++E C  VC  V+
Sbjct: 2506 CKLPKDGGTCRKFIIKWYHDAVTGNCARFWYGGCGGNENRFDSQEECEKVCSPVL 2560


>ref|XP_001928130.2| PREDICTED: collagen alpha-3(VI) chain isoform 2 [Sus scrofa].
          Length = 2972

 Score = 68.6 bits (166), Expect = 2e-11
 Identities = 27/55 (49%), Positives = 33/55 (60%)
 Frame = +1

Query: 1021 CSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGSVM 1185
            C    + G CR  I +WY D   G CA F+YGGCGGN N FD++E C  VC  V+
Sbjct: 2907 CKLPKDGGTCRKFIIKWYHDAVTGNCARFWYGGCGGNENRFDSQEECEKVCSPVL 2961


>ref|XP_001928122.2| PREDICTED: collagen alpha-3(VI) chain isoform 1 [Sus scrofa].
          Length = 3178

 Score = 68.6 bits (166), Expect = 2e-11
 Identities = 27/55 (49%), Positives = 33/55 (60%)
 Frame = +1

Query: 1021 CSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGSVM 1185
            C    + G CR  I +WY D   G CA F+YGGCGGN N FD++E C  VC  V+
Sbjct: 3113 CKLPKDGGTCRKFIIKWYHDAVTGNCARFWYGGCGGNENRFDSQEECEKVCSPVL 3167


>ref|XP_003127156.1| PREDICTED: kunitz-type protease inhibitor 2-like isoform 1 [Sus
            scrofa].
          Length = 252

 Score = 66.6 bits (161), Expect = 7e-11
 Identities = 25/51 (49%), Positives = 34/51 (66%)
 Frame = +1

Query: 1021 CSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVC 1173
            C+ +A TGPCRA   RWYF+  +  C  F YGGC GN+N++ ++E CM  C
Sbjct: 133  CTAKAVTGPCRAAFPRWYFNAEKNSCDKFIYGGCRGNKNSYHSKEECMQRC 183



 Score = 65.9 bits (159), Expect = 1e-10
 Identities = 27/59 (45%), Positives = 35/59 (59%)
 Frame = +1

Query: 1021 CSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGSVMSQSL 1197
            C      G CRA I RW+++VT G C  F YGGC GN NN+ T+E C+A C  V   ++
Sbjct: 38   CQVPKVVGRCRASIPRWWYNVTGGSCQQFVYGGCEGNDNNYMTKEECLAKCAGVTESTI 96


>ref|NP_001128730.1| hypothetical protein LOC100155068 [Sus scrofa].
          Length = 303

 Score = 61.6 bits (148), Expect = 2e-09
 Identities = 30/79 (37%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
 Frame = +1

Query: 1021 CSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGS-----VM 1185
            C   A+ G C+A   R+Y++   GKC PF Y GCGGN NNF +++ C+  C       + 
Sbjct: 216  CLTPADRGLCQANERRFYYNSVIGKCRPFKYSGCGGNENNFTSKKACLKTCKKGFVQRIS 275

Query: 1186 SQSLLKTTQEHLPQDPVKL 1242
               L+KT ++   Q PVK+
Sbjct: 276  KDGLIKTKRKRKKQ-PVKI 293



 Score = 60.8 bits (146), Expect = 4e-09
 Identities = 22/51 (43%), Positives = 35/51 (68%)
 Frame = +1

Query: 1021 CSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVC 1173
            C+ +A+ GPC+AM+ R++F++   +C  F YGGC GN+N F++ E C   C
Sbjct: 50   CAMKADDGPCKAMMKRFFFNINTQQCEEFIYGGCEGNQNRFESLEECKEKC 100



 Score = 52.4 bits (124), Expect = 1e-06
 Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
 Frame = +1

Query: 1021 CSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGSVMSQSLL 1200
            C  + + G CR  I+R++++    +C  F YGGC GN NNF++ E C   C   ++   +
Sbjct: 123  CFLEEDAGICRGYITRYFYNNQSKQCERFKYGGCLGNLNNFESLEECKNTCEDALNDLQV 182

Query: 1201 ---KTTQEHLPQDPVKLPTTAA 1257
               +T  E L  D + L  T A
Sbjct: 183  DDYRTPLEALNNDSLTLQPTKA 204


>ref|NP_001157478.1| protein AMBP precursor [Sus scrofa].
          Length = 352

 Score = 60.8 bits (146), Expect = 4e-09
 Identities = 25/52 (48%), Positives = 29/52 (55%)
 Frame = +1

Query: 1021 CSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCG 1176
            CS    +GPCR     W FD  +GKC  F YGGC GN N F +E+ C   CG
Sbjct: 287  CSLPIVSGPCRGFFQLWAFDAVQGKCVLFNYGGCQGNGNQFYSEKECKEYCG 338



 Score = 55.1 bits (131), Expect = 2e-07
 Identities = 24/59 (40%), Positives = 34/59 (57%)
 Frame = +1

Query: 1021 CSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGSVMSQSL 1197
            C      GPC  MI R++++ +   C  F YGGC GN NNF +E+ C+  C +V + SL
Sbjct: 231  CQLGYSQGPCLGMIKRYFYNGSSMACETFHYGGCMGNGNNFVSEKECLQTCRTVEACSL 289


  Database: RefSeq49_SP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 11,343,932
  Number of sequences in database:  24,897
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 71,486,468
Number of extensions: 2135226
Number of successful extensions: 7464
Number of sequences better than 1.0e-05: 20
Number of HSP's gapped: 7400
Number of HSP's successfully gapped: 25
Length of query: 988
Length of database: 11,343,932
Length adjustment: 109
Effective length of query: 879
Effective length of database: 8,630,159
Effective search space: 7585909761
Effective search space used: 7585909761
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

BLASTN 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-001194
         (2964 letters)

Database: Sscrofa_10.2.fasta 
           4582 sequences; 2,808,509,378 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Sscrofa_Chr13                                                        1104   0.0  
gb|GL895340.2| Sus scrofa unplaced genomic scaffold ChrUScaf3224      170   3e-39
Sscrofa_Chr09                                                          74   5e-10

>Sscrofa_Chr13 
||          Length = 218635234

 Score = 1104 bits (557), Expect = 0.0
 Identities = 593/606 (97%), Gaps = 1/606 (0%)
 Strand = Plus / Minus

                                                                             
Query: 2360      aggttgacgcagctgtgaccccggaggagcgccacctctccaagatgcagcagaatggct 2419
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199291816 aggttgacgcagctgtgaccccggaggagcgccacctctccaagatgcagcagaatggct 199291757

                                                                             
Query: 2420      atgaaaacccaacttacaagttctttgagcagatgcagaactagaccgccgccacagcag 2479
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199291756 atgaaaacccaacttacaagttctttgagcagatgcagaactagaccgccgccacagcag 199291697

                                                                             
Query: 2480      cctctgaagttggacagcaaaaccattgcttcactacccatcggtgttcatttatagaat 2539
                 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 199291696 cctctgaagttggacagcaaaaccattgcttcactacccattggtgttcatttatagaat 199291637

                                                                             
Query: 2540      aatggggaaagacacaaacccttctgttttattatttactcatgatcgcctttcagcagc 2599
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199291636 aatggggaaagacacaaacccttctgttttattatttactcatgatcgcctttcagcagc 199291577

                                                                             
Query: 2600      tgtgctgtaacacaagtagatgcctgaacttgaattaatattacgaatcagtaatgtatt 2659
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199291576 tgtgctgtaacacaagtagatgcctgaacttgaattaatattacgaatcagtaatgtatt 199291517

                                                                             
Query: 2660      ctctctctttacatttccggtctctacactacattattaatgggttttgtgtactgtaaa 2719
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199291516 ctctctctttacatttccggtctctacactacattattaatgggttttgtgtactgtaaa 199291457

                                                                             
Query: 2720      gaatgaagctgtatcaaactagtgcatgaatagattccctcctgattatttatcatgtag 2779
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199291456 gaatgaagctgtatcaaactagtgcatgaatagattccctcctgattatttatcatgtag 199291397

                                                                             
Query: 2780      ccccttagccagttgtatattattcttgtggttttgtgatccaattaagtcctactttga 2839
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199291396 ccccttagccagttgtatattattcttgtggttttgtgatccaattaagtcctactttga 199291337

                                                                             
Query: 2840      aatatgctttaagaatcgatgggggatgcttcatgtgaacgtggggatttagctgcttct 2899
                 |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||
Sbjct: 199291336 aatatgctttaagaatcgatgggggatgcttcatgtgaacgtgggagtttagctgcttct 199291277

                                                                             
Query: 2900      cttgcctaagtannnnnnncctgatcactatgcatttt-aaggtaaaactttttatgtat 2958
                 ||||||||||||       ||||||||||||||||||| ||||||||  |||||||||||
Sbjct: 199291276 cttgcctaagtattcttttcctgatcactatgcattttaaaggtaaacatttttatgtat 199291217

                       
Query: 2959      tccaaa 2964
                 ||||||
Sbjct: 199291216 tccaaa 199291211



 Score =  442 bits (223), Expect = e-121
 Identities = 223/223 (100%)
 Strand = Plus / Minus

                                                                             
Query: 1837      gatgagctgctgcagaaagagcaaaactactcggatgatgtcttggccaacatgatcagc 1896
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199323023 gatgagctgctgcagaaagagcaaaactactcggatgatgtcttggccaacatgatcagc 199322964

                                                                             
Query: 1897      gaaccgaggatcagttatggaaacgatgctctcatgccgtctctgactgaaaccaaaacc 1956
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199322963 gaaccgaggatcagttatggaaacgatgctctcatgccgtctctgactgaaaccaaaacc 199322904

                                                                             
Query: 1957      accgtggagcttcttcctgtgaatggagagttcagcctggatgatctccagccctggcat 2016
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199322903 accgtggagcttcttcctgtgaatggagagttcagcctggatgatctccagccctggcat 199322844

                                                            
Query: 2017      ccttttggggtagactctgtgcctgccaacacagaaaatgaag 2059
                 |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199322843 ccttttggggtagactctgtgcctgccaacacagaaaatgaag 199322801



 Score =  414 bits (209), Expect = e-112
 Identities = 209/209 (100%)
 Strand = Plus / Minus

                                                                             
Query: 2         ggtcagtttcctcggcagcggtaggagagagcacccggggcagcgcgagcgcggggccac 61
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199568738 ggtcagtttcctcggcagcggtaggagagagcacccggggcagcgcgagcgcggggccac 199568679

                                                                             
Query: 62        cgtagacagcggcagcgacaccggcagagcaagggcgcggcggatcccacgcgaacagca 121
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199568678 cgtagacagcggcagcgacaccggcagagcaagggcgcggcggatcccacgcgaacagca 199568619

                                                                             
Query: 122       gcgcactcggtgccccgcgcagggtcgcgatgctgcccggtttggcactggtcctgctgg 181
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199568618 gcgcactcggtgccccgcgcagggtcgcgatgctgcccggtttggcactggtcctgctgg 199568559

                                              
Query: 182       ccgcctggacggctcgggcgctggaggtg 210
                 |||||||||||||||||||||||||||||
Sbjct: 199568558 ccgcctggacggctcgggcgctggaggtg 199568530



 Score =  389 bits (196), Expect = e-105
 Identities = 196/196 (100%)
 Strand = Plus / Minus

                                                                             
Query: 617       agacctgtagtgagaagagtacgaacttgcatgactatggcatgttgctgccctgtggaa 676
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199474141 agacctgtagtgagaagagtacgaacttgcatgactatggcatgttgctgccctgtggaa 199474082

                                                                             
Query: 677       ttgacaagttccgaggggtggagtttgtgtgttgcccactggccgaggaaagtgacaata 736
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199474081 ttgacaagttccgaggggtggagtttgtgtgttgcccactggccgaggaaagtgacaata 199474022

                                                                             
Query: 737       tcgactcagcagatgcagaagaggatgactcggacgtctggtggggtggagcagatacag 796
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199474021 tcgactcagcagatgcagaagaggatgactcggacgtctggtggggtggagcagatacag 199473962

                                 
Query: 797       actatgcagatggcag 812
                 ||||||||||||||||
Sbjct: 199473961 actatgcagatggcag 199473946



 Score =  341 bits (172), Expect = 1e-90
 Identities = 172/172 (100%)
 Strand = Plus / Minus

                                                                             
Query: 206       aggtgcccactgatggcaatgccggcctgcttgcagaaccccaggttgccatgttctgtg 265
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199507331 aggtgcccactgatggcaatgccggcctgcttgcagaaccccaggttgccatgttctgtg 199507272

                                                                             
Query: 266       gcaaactcaacatgcacatgaatgtgcagaatgggaagtgggagtcagatccgtcgggga 325
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199507271 gcaaactcaacatgcacatgaatgtgcagaatgggaagtgggagtcagatccgtcgggga 199507212

                                                                     
Query: 326       ccaaaacctgcattggcaccaaggaaggcatcttgcagtactgccaagaagt 377
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199507211 ccaaaacctgcattggcaccaaggaaggcatcttgcagtactgccaagaagt 199507160



 Score =  337 bits (170), Expect = 2e-89
 Identities = 170/170 (100%)
 Strand = Plus / Minus

                                                                             
Query: 1014      agaggtgtgctctgaacaagccgagacggggccgtgccgagcaatgatctcccgctggta 1073
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199420005 agaggtgtgctctgaacaagccgagacggggccgtgccgagcaatgatctcccgctggta 199419946

                                                                             
Query: 1074      ctttgatgtgactgaagggaagtgcgccccgttcttttacggcggatgtggcggcaaccg 1133
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199419945 ctttgatgtgactgaagggaagtgcgccccgttcttttacggcggatgtggcggcaaccg 199419886

                                                                   
Query: 1134      aaacaactttgacacagaggaatactgcatggccgtgtgtggcagcgtca 1183
                 ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199419885 aaacaactttgacacagaggaatactgcatggccgtgtgtggcagcgtca 199419836



 Score =  325 bits (164), Expect = 8e-86
 Identities = 167/168 (99%)
 Strand = Plus / Minus

                                                                             
Query: 1441      gtgatccagcatttccaggagaaagtggagtctctggagcaggaagcagccaacgagagg 1500
                 ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199380167 gtgatgcagcatttccaggagaaagtggagtctctggagcaggaagcagccaacgagagg 199380108

                                                                             
Query: 1501      cagcagttggtggagacgcacatggccagagtggaggccatgcttaacgaccgccggcgc 1560
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199380107 cagcagttggtggagacgcacatggccagagtggaggccatgcttaacgaccgccggcgc 199380048

                                                                 
Query: 1561      ctggccctggagaattacatcacggctcttcaggctgttcctcctcgg 1608
                 ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199380047 ctggccctggagaattacatcacggctcttcaggctgttcctcctcgg 199380000



 Score =  297 bits (150), Expect = 2e-77
 Identities = 150/150 (100%)
 Strand = Plus / Minus

                                                                             
Query: 2214      ggtgttcttcgcagaagatgtgggttcaaacaaaggtgccatcattggactcatggtggg 2273
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199302682 ggtgttcttcgcagaagatgtgggttcaaacaaaggtgccatcattggactcatggtggg 199302623

                                                                             
Query: 2274      tggtgttgtcatagcaaccgtgattgtcatcaccttagtgatgctgaagaagaaacagta 2333
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199302622 tggtgttgtcatagcaaccgtgattgtcatcaccttagtgatgctgaagaagaaacagta 199302563

                                               
Query: 2334      cacatccatccatcacggtgtggtggaggt 2363
                 ||||||||||||||||||||||||||||||
Sbjct: 199302562 cacatccatccatcacggtgtggtggaggt 199302533



 Score =  262 bits (132), Expect = 1e-66
 Identities = 132/132 (100%)
 Strand = Plus / Minus

                                                                             
Query: 1608      gcctcgtcatgtgttcaacatgctcaagaagtatgtccgtgccgaacagaaagacagaca 1667
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199362640 gcctcgtcatgtgttcaacatgctcaagaagtatgtccgtgccgaacagaaagacagaca 199362581

                                                                             
Query: 1668      gcacaccctaaagcattttgaacacgttcgcatggtagatccaaagaaagctgctcagat 1727
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199362580 gcacaccctaaagcattttgaacacgttcgcatggtagatccaaagaaagctgctcagat 199362521

                             
Query: 1728      ccgatcccaggt 1739
                 ||||||||||||
Sbjct: 199362520 ccgatcccaggt 199362509



 Score =  262 bits (132), Expect = 1e-66
 Identities = 135/136 (99%)
 Strand = Plus / Minus

                                                                             
Query: 1241      ttcctacaacagcagccagcaccccggatgccgttgacaagtatcttgagacacctggag 1300
                 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 199385121 ttcctacaacagcagccagcaccccagatgccgttgacaagtatcttgagacacctggag 199385062

                                                                             
Query: 1301      atgagaacgaacatgcgcatttccagaaagccaaagagaggctggaggccaagcaccgcg 1360
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199385061 atgagaacgaacatgcgcatttccagaaagccaaagagaggctggaggccaagcaccgcg 199385002

                                 
Query: 1361      agagaatgtcccaggt 1376
                 ||||||||||||||||
Sbjct: 199385001 agagaatgtcccaggt 199384986



 Score =  258 bits (130), Expect = 2e-65
 Identities = 130/130 (100%)
 Strand = Plus / Minus

                                                                             
Query: 376       gtctaccctgaactgcagatcaccaatgtggtagaagccaaccaaccagtgaccatccag 435
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199484787 gtctaccctgaactgcagatcaccaatgtggtagaagccaaccaaccagtgaccatccag 199484728

                                                                             
Query: 436       aactggtgcaagaggagccggaagcagtgcaagacccacactcacattgtgattccgtac 495
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199484727 aactggtgcaagaggagccggaagcagtgcaagacccacactcacattgtgattccgtac 199484668

                           
Query: 496       cgctgcttag 505
                 ||||||||||
Sbjct: 199484667 cgctgcttag 199484658



 Score =  230 bits (116), Expect = 4e-57
 Identities = 116/116 (100%)
 Strand = Plus / Minus

                                                                             
Query: 503       tagttggcgagtttgtaagcgatgccctccttgttccggacaagtgcaagttcttacacc 562
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199476108 tagttggcgagtttgtaagcgatgccctccttgttccggacaagtgcaagttcttacacc 199476049

                                                                         
Query: 563       aggagaggatggatgtttgcgaaacccaccttcactggcacactgtggccaaagag 618
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199476048 aggagaggatggatgtttgcgaaacccaccttcactggcacactgtggccaaagag 199475993



 Score =  206 bits (104), Expect = 5e-50
 Identities = 107/108 (99%)
 Strand = Plus / Minus

                                                                             
Query: 1735      caggttatgacacacctccgtgtgatttacgagcgcatgaaccagtctctctccctgctc 1794
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199361680 caggttatgacacacctccgtgtgatttacgagcgcatgaaccagtctctctccctgctc 199361621

                                                                 
Query: 1795      tacaacgttcctgctgtggctgaggaaattcaggatgaagttgatgag 1842
                 ||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 199361620 tacaacgttcctgctgtggctgaggaaattcaggatgaagttggtgag 199361573



 Score =  202 bits (102), Expect = 8e-49
 Identities = 105/106 (99%)
 Strand = Plus / Minus

                                                                             
Query: 2111      caggttccgggttgaccaacatcaagacggaagagatctctgaagtgaagatggatgcgg 2170
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199306512 caggttccgggttgaccaacatcaagacggaagagatctctgaagtgaagatggatgcgg 199306453

                                                               
Query: 2171      agttccgacacgattcgggctatgaggttcatcaccaaaaactggt 2216
                 |||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 199306452 agttccgacacgattcaggctatgaggttcatcaccaaaaactggt 199306407



 Score =  155 bits (78), Expect = 2e-34
 Identities = 78/78 (100%)
 Strand = Plus / Minus

                                                                             
Query: 1372      caggtcatgagagagtgggaagaggcagaacgtcaagcaaagaacttgcctaaagctgat 1431
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199380932 caggtcatgagagagtgggaagaggcagaacgtcaagcaaagaacttgcctaaagctgat 199380873

                                   
Query: 1432      aagaaagcagtgatccag 1449
                 ||||||||||||||||||
Sbjct: 199380872 aagaaagcagtgatccag 199380855



 Score =  115 bits (58), Expect = 1e-22
 Identities = 58/58 (100%)
 Strand = Plus / Minus

                                                                           
Query: 2058      agtcgagcctgttgacgcccgccctgcagccgaccgaggactgaccactcgaccaggt 2115
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199313986 agtcgagcctgttgacgcccgccctgcagccgaccgaggactgaccactcgaccaggt 199313929



 Score =  113 bits (57), Expect = 6e-22
 Identities = 57/57 (100%)
 Strand = Plus / Minus

                                                                          
Query: 1184      tgtcccaaagtttactcaagactacccaggaacatcttccccaagatcctgttaaac 1240
                 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199417167 tgtcccaaagtttactcaagactacccaggaacatcttccccaagatcctgttaaac 199417111


>gb|GL895340.2| Sus scrofa unplaced genomic scaffold ChrUScaf3224
          Length = 24765

 Score =  170 bits (86), Expect = 3e-39
 Identities = 86/86 (100%)
 Strand = Plus / Plus

                                                                         
Query: 1291  acacctggagatgagaacgaacatgcgcatttccagaaagccaaagagaggctggaggcc 1350
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10648 acacctggagatgagaacgaacatgcgcatttccagaaagccaaagagaggctggaggcc 10707

                                       
Query: 1351  aagcaccgcgagagaatgtcccaggt 1376
             ||||||||||||||||||||||||||
Sbjct: 10708 aagcaccgcgagagaatgtcccaggt 10733



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 34/34 (100%)
 Strand = Plus / Plus

                                               
Query: 1241  ttcctacaacagcagccagcaccccggatgccgt 1274
             ||||||||||||||||||||||||||||||||||
Sbjct: 10514 ttcctacaacagcagccagcaccccggatgccgt 10547


>Sscrofa_Chr09 
||          Length = 153670197

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 85/101 (84%)
 Strand = Plus / Plus

                                                                            
Query: 1474     ctggagcaggaagcagccaacgagaggcagcagttggtggagacgcacatggccagagtg 1533
                |||||| |||||||||||| ||||| ||||||| ||||||| || ||| | ||  | |||
Sbjct: 63020480 ctggagaaggaagcagccagcgagaagcagcagctggtggaaacccacctcgcgcgggtg 63020539

                                                         
Query: 1534     gaggccatgcttaacgaccgccggcgcctggccctggagaa 1574
                ||||||||||| ||||||||||| ||  |||| ||||||||
Sbjct: 63020540 gaggccatgctcaacgaccgccgccgggtggcgctggagaa 63020580


  Database: Sscrofa_10.2.fasta
    Posted date:  Nov 16, 2011 10:34 AM
  Number of letters in database: 2,808,509,378
  Number of sequences in database:  4582
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 77,023,988
Number of extensions: 488
Number of successful extensions: 488
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 485
Number of HSP's successfully gapped: 20
Length of query: 2964
Length of database: 2,808,509,378
Length adjustment: 22
Effective length of query: 2942
Effective length of database: 2,808,408,574
Effective search space: 8262338024708
Effective search space used: 8262338024708
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)