Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-001332
(1031 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001069835.1| ORM1-like protein 3 [Bos taurus]. 313 1e-85
Alignment gi|NP_001070601.1| ORM1-like protein 1 [Bos taurus]. 282 4e-76
Alignment gi|NP_001014931.1| ORM1-like protein 2 [Bos taurus]. 277 1e-74
>ref|NP_001069835.1| ORM1-like protein 3 [Bos taurus].
Length = 153
Score = 313 bits (803), Expect = 1e-85
Identities = 153/153 (100%), Positives = 153/153 (100%)
Frame = +1
Query: 145 MNVGTAHSEVNPNTRVMNSRGIWLSYVLAIGLLHVVLLSIPFVSVPVVWTLTNLIHNMGM 324
MNVGTAHSEVNPNTRVMNSRGIWLSYVLAIGLLHVVLLSIPFVSVPVVWTLTNLIHNMGM
Sbjct: 1 MNVGTAHSEVNPNTRVMNSRGIWLSYVLAIGLLHVVLLSIPFVSVPVVWTLTNLIHNMGM 60
Query: 325 YIFLHTVKGTPFETPDQGKARLLTHWEQMDYGVQFTASRKFLTITPIVLYFLTSFYTKYD 504
YIFLHTVKGTPFETPDQGKARLLTHWEQMDYGVQFTASRKFLTITPIVLYFLTSFYTKYD
Sbjct: 61 YIFLHTVKGTPFETPDQGKARLLTHWEQMDYGVQFTASRKFLTITPIVLYFLTSFYTKYD 120
Query: 505 QIHFILNTVSLMSVLIPKLPQLHGVRIFGINKY 603
QIHFILNTVSLMSVLIPKLPQLHGVRIFGINKY
Sbjct: 121 QIHFILNTVSLMSVLIPKLPQLHGVRIFGINKY 153
>ref|NP_001070601.1| ORM1-like protein 1 [Bos taurus].
Length = 153
Score = 282 bits (721), Expect = 4e-76
Identities = 129/153 (84%), Positives = 142/153 (92%)
Frame = +1
Query: 145 MNVGTAHSEVNPNTRVMNSRGIWLSYVLAIGLLHVVLLSIPFVSVPVVWTLTNLIHNMGM 324
MNVG AHSEVNPNTRVMNSRG+WL+Y L +GLLH+VLLSIPF SVPV WTLTN+IHN+GM
Sbjct: 1 MNVGVAHSEVNPNTRVMNSRGMWLTYALGVGLLHIVLLSIPFFSVPVAWTLTNVIHNLGM 60
Query: 325 YIFLHTVKGTPFETPDQGKARLLTHWEQMDYGVQFTASRKFLTITPIVLYFLTSFYTKYD 504
Y+FLH VKGTPFETPDQGKARLLTHWEQ+DYGVQFT+SRKF TI+PI+LYFL SFYTKYD
Sbjct: 61 YVFLHAVKGTPFETPDQGKARLLTHWEQLDYGVQFTSSRKFFTISPIILYFLASFYTKYD 120
Query: 505 QIHFILNTVSLMSVLIPKLPQLHGVRIFGINKY 603
HFILNT SL+SVLIPK+PQLHGVRIFGINKY
Sbjct: 121 TTHFILNTASLLSVLIPKMPQLHGVRIFGINKY 153
>ref|NP_001014931.1| ORM1-like protein 2 [Bos taurus].
Length = 153
Score = 277 bits (709), Expect = 1e-74
Identities = 126/153 (82%), Positives = 143/153 (93%)
Frame = +1
Query: 145 MNVGTAHSEVNPNTRVMNSRGIWLSYVLAIGLLHVVLLSIPFVSVPVVWTLTNLIHNMGM 324
MNVG AHSEVNPNTRVMNSRGIWL+Y++ +GLLHVVLLSIPF S+PVVWTLTN+IHN+ M
Sbjct: 1 MNVGVAHSEVNPNTRVMNSRGIWLAYIILVGLLHVVLLSIPFFSIPVVWTLTNVIHNLVM 60
Query: 325 YIFLHTVKGTPFETPDQGKARLLTHWEQMDYGVQFTASRKFLTITPIVLYFLTSFYTKYD 504
Y+FLHTVKGTPFETPDQGKARLLTHWEQMDYG+QFT+SRKFL+I+PIVLY L SFYTKYD
Sbjct: 61 YVFLHTVKGTPFETPDQGKARLLTHWEQMDYGLQFTSSRKFLSISPIVLYLLASFYTKYD 120
Query: 505 QIHFILNTVSLMSVLIPKLPQLHGVRIFGINKY 603
HF++NT SL+SVL+PKLPQ HGVR+FGINKY
Sbjct: 121 AAHFLINTASLLSVLLPKLPQFHGVRLFGINKY 153
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 42,428,529
Number of extensions: 1377513
Number of successful extensions: 7754
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 7648
Number of HSP's successfully gapped: 3
Length of query: 343
Length of database: 17,681,374
Length adjustment: 103
Effective length of query: 240
Effective length of database: 14,273,310
Effective search space: 3425594400
Effective search space used: 3425594400
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-001332
(1031 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_537651.2| PREDICTED: similar to ORM1-like 3 isoform 1 [Ca... 313 1e-85
Alignment gi|XP_863510.1| PREDICTED: similar to ORM1-like 3 isoform 4 [Ca... 313 1e-85
Alignment gi|XP_851310.1| PREDICTED: similar to ORM1-like 3 isoform 2 [Ca... 313 1e-85
Alignment gi|XP_848266.1| PREDICTED: similar to ORM1-like 1 isoform 1 [Ca... 281 9e-76
Alignment gi|XP_848236.1| PREDICTED: similar to ORM1-like 2 isoform 1 [Ca... 279 3e-75
Alignment gi|XP_863474.1| PREDICTED: similar to ORM1-like 3 isoform 3 [Ca... 270 1e-72
Alignment gi|XP_855628.1| PREDICTED: similar to ORM1-like 2 isoform 2 [Ca... 247 1e-65
Alignment gi|XP_855747.1| PREDICTED: similar to ORM1-like 1 isoform 2 [Ca... 245 4e-65
Alignment gi|XP_848836.1| PREDICTED: similar to ORM1-like 2 [Canis famili... 119 5e-27
>ref|XP_537651.2| PREDICTED: similar to ORM1-like 3 isoform 1 [Canis familiaris].
Length = 153
Score = 313 bits (803), Expect = 1e-85
Identities = 153/153 (100%), Positives = 153/153 (100%)
Frame = +1
Query: 145 MNVGTAHSEVNPNTRVMNSRGIWLSYVLAIGLLHVVLLSIPFVSVPVVWTLTNLIHNMGM 324
MNVGTAHSEVNPNTRVMNSRGIWLSYVLAIGLLHVVLLSIPFVSVPVVWTLTNLIHNMGM
Sbjct: 1 MNVGTAHSEVNPNTRVMNSRGIWLSYVLAIGLLHVVLLSIPFVSVPVVWTLTNLIHNMGM 60
Query: 325 YIFLHTVKGTPFETPDQGKARLLTHWEQMDYGVQFTASRKFLTITPIVLYFLTSFYTKYD 504
YIFLHTVKGTPFETPDQGKARLLTHWEQMDYGVQFTASRKFLTITPIVLYFLTSFYTKYD
Sbjct: 61 YIFLHTVKGTPFETPDQGKARLLTHWEQMDYGVQFTASRKFLTITPIVLYFLTSFYTKYD 120
Query: 505 QIHFILNTVSLMSVLIPKLPQLHGVRIFGINKY 603
QIHFILNTVSLMSVLIPKLPQLHGVRIFGINKY
Sbjct: 121 QIHFILNTVSLMSVLIPKLPQLHGVRIFGINKY 153
>ref|XP_863510.1| PREDICTED: similar to ORM1-like 3 isoform 4 [Canis familiaris].
Length = 153
Score = 313 bits (803), Expect = 1e-85
Identities = 153/153 (100%), Positives = 153/153 (100%)
Frame = +1
Query: 145 MNVGTAHSEVNPNTRVMNSRGIWLSYVLAIGLLHVVLLSIPFVSVPVVWTLTNLIHNMGM 324
MNVGTAHSEVNPNTRVMNSRGIWLSYVLAIGLLHVVLLSIPFVSVPVVWTLTNLIHNMGM
Sbjct: 1 MNVGTAHSEVNPNTRVMNSRGIWLSYVLAIGLLHVVLLSIPFVSVPVVWTLTNLIHNMGM 60
Query: 325 YIFLHTVKGTPFETPDQGKARLLTHWEQMDYGVQFTASRKFLTITPIVLYFLTSFYTKYD 504
YIFLHTVKGTPFETPDQGKARLLTHWEQMDYGVQFTASRKFLTITPIVLYFLTSFYTKYD
Sbjct: 61 YIFLHTVKGTPFETPDQGKARLLTHWEQMDYGVQFTASRKFLTITPIVLYFLTSFYTKYD 120
Query: 505 QIHFILNTVSLMSVLIPKLPQLHGVRIFGINKY 603
QIHFILNTVSLMSVLIPKLPQLHGVRIFGINKY
Sbjct: 121 QIHFILNTVSLMSVLIPKLPQLHGVRIFGINKY 153
>ref|XP_851310.1| PREDICTED: similar to ORM1-like 3 isoform 2 [Canis familiaris].
Length = 153
Score = 313 bits (803), Expect = 1e-85
Identities = 153/153 (100%), Positives = 153/153 (100%)
Frame = +1
Query: 145 MNVGTAHSEVNPNTRVMNSRGIWLSYVLAIGLLHVVLLSIPFVSVPVVWTLTNLIHNMGM 324
MNVGTAHSEVNPNTRVMNSRGIWLSYVLAIGLLHVVLLSIPFVSVPVVWTLTNLIHNMGM
Sbjct: 1 MNVGTAHSEVNPNTRVMNSRGIWLSYVLAIGLLHVVLLSIPFVSVPVVWTLTNLIHNMGM 60
Query: 325 YIFLHTVKGTPFETPDQGKARLLTHWEQMDYGVQFTASRKFLTITPIVLYFLTSFYTKYD 504
YIFLHTVKGTPFETPDQGKARLLTHWEQMDYGVQFTASRKFLTITPIVLYFLTSFYTKYD
Sbjct: 61 YIFLHTVKGTPFETPDQGKARLLTHWEQMDYGVQFTASRKFLTITPIVLYFLTSFYTKYD 120
Query: 505 QIHFILNTVSLMSVLIPKLPQLHGVRIFGINKY 603
QIHFILNTVSLMSVLIPKLPQLHGVRIFGINKY
Sbjct: 121 QIHFILNTVSLMSVLIPKLPQLHGVRIFGINKY 153
>ref|XP_848266.1| PREDICTED: similar to ORM1-like 1 isoform 1 [Canis familiaris].
Length = 153
Score = 281 bits (718), Expect = 9e-76
Identities = 129/153 (84%), Positives = 142/153 (92%)
Frame = +1
Query: 145 MNVGTAHSEVNPNTRVMNSRGIWLSYVLAIGLLHVVLLSIPFVSVPVVWTLTNLIHNMGM 324
MNVG AHSEVNPNTRVMNSRG+WL+Y L +GLLH+VLLSIPF SVPV WTLTN+IHN+GM
Sbjct: 1 MNVGVAHSEVNPNTRVMNSRGMWLTYGLGVGLLHIVLLSIPFFSVPVAWTLTNVIHNLGM 60
Query: 325 YIFLHTVKGTPFETPDQGKARLLTHWEQMDYGVQFTASRKFLTITPIVLYFLTSFYTKYD 504
Y+FLH VKGTPFETPDQGKARLLTHWEQ+DYGVQFT+SRKF TI+PI+LYFL SFYTKYD
Sbjct: 61 YVFLHAVKGTPFETPDQGKARLLTHWEQLDYGVQFTSSRKFFTISPIILYFLASFYTKYD 120
Query: 505 QIHFILNTVSLMSVLIPKLPQLHGVRIFGINKY 603
HFILNT SL+SVLIPK+PQLHGVRIFGINKY
Sbjct: 121 PTHFILNTASLLSVLIPKMPQLHGVRIFGINKY 153
>ref|XP_848236.1| PREDICTED: similar to ORM1-like 2 isoform 1 [Canis familiaris].
Length = 153
Score = 279 bits (714), Expect = 3e-75
Identities = 127/153 (83%), Positives = 143/153 (93%)
Frame = +1
Query: 145 MNVGTAHSEVNPNTRVMNSRGIWLSYVLAIGLLHVVLLSIPFVSVPVVWTLTNLIHNMGM 324
MNVG AHSEVNPNTRVMNSRGIWL+Y++ +GLLHVVLLSIPF S+PVVWTLTN+IHN+ M
Sbjct: 1 MNVGVAHSEVNPNTRVMNSRGIWLAYIILVGLLHVVLLSIPFFSIPVVWTLTNVIHNLAM 60
Query: 325 YIFLHTVKGTPFETPDQGKARLLTHWEQMDYGVQFTASRKFLTITPIVLYFLTSFYTKYD 504
Y+FLHTVKGTPFETPDQGKARLLTHWEQMDYG+QFT+SRKFL+I+PIVLY L SFYTKYD
Sbjct: 61 YVFLHTVKGTPFETPDQGKARLLTHWEQMDYGLQFTSSRKFLSISPIVLYLLASFYTKYD 120
Query: 505 QIHFILNTVSLMSVLIPKLPQLHGVRIFGINKY 603
HFI+NT SL+SVL+PKLPQ HGVR+FGINKY
Sbjct: 121 AAHFIINTASLLSVLLPKLPQFHGVRLFGINKY 153
>ref|XP_863474.1| PREDICTED: similar to ORM1-like 3 isoform 3 [Canis familiaris].
Length = 137
Score = 270 bits (691), Expect = 1e-72
Identities = 137/153 (89%), Positives = 137/153 (89%)
Frame = +1
Query: 145 MNVGTAHSEVNPNTRVMNSRGIWLSYVLAIGLLHVVLLSIPFVSVPVVWTLTNLIHNMGM 324
MNVGTAHSEVNPNTRVMNSRGIWLSYVLAIGLLHVVLLSIPF GM
Sbjct: 1 MNVGTAHSEVNPNTRVMNSRGIWLSYVLAIGLLHVVLLSIPF----------------GM 44
Query: 325 YIFLHTVKGTPFETPDQGKARLLTHWEQMDYGVQFTASRKFLTITPIVLYFLTSFYTKYD 504
YIFLHTVKGTPFETPDQGKARLLTHWEQMDYGVQFTASRKFLTITPIVLYFLTSFYTKYD
Sbjct: 45 YIFLHTVKGTPFETPDQGKARLLTHWEQMDYGVQFTASRKFLTITPIVLYFLTSFYTKYD 104
Query: 505 QIHFILNTVSLMSVLIPKLPQLHGVRIFGINKY 603
QIHFILNTVSLMSVLIPKLPQLHGVRIFGINKY
Sbjct: 105 QIHFILNTVSLMSVLIPKLPQLHGVRIFGINKY 137
>ref|XP_855628.1| PREDICTED: similar to ORM1-like 2 isoform 2 [Canis familiaris].
Length = 141
Score = 247 bits (631), Expect = 1e-65
Identities = 117/153 (76%), Positives = 131/153 (85%)
Frame = +1
Query: 145 MNVGTAHSEVNPNTRVMNSRGIWLSYVLAIGLLHVVLLSIPFVSVPVVWTLTNLIHNMGM 324
MNVG AHSEVNPNTRVMNSRGIWL+Y++ +GLLHVVLLSIPF S+P M
Sbjct: 1 MNVGVAHSEVNPNTRVMNSRGIWLAYIILVGLLHVVLLSIPFFSIPA------------M 48
Query: 325 YIFLHTVKGTPFETPDQGKARLLTHWEQMDYGVQFTASRKFLTITPIVLYFLTSFYTKYD 504
Y+FLHTVKGTPFETPDQGKARLLTHWEQMDYG+QFT+SRKFL+I+PIVLY L SFYTKYD
Sbjct: 49 YVFLHTVKGTPFETPDQGKARLLTHWEQMDYGLQFTSSRKFLSISPIVLYLLASFYTKYD 108
Query: 505 QIHFILNTVSLMSVLIPKLPQLHGVRIFGINKY 603
HFI+NT SL+SVL+PKLPQ HGVR+FGINKY
Sbjct: 109 AAHFIINTASLLSVLLPKLPQFHGVRLFGINKY 141
>ref|XP_855747.1| PREDICTED: similar to ORM1-like 1 isoform 2 [Canis familiaris].
Length = 139
Score = 245 bits (626), Expect = 4e-65
Identities = 118/153 (77%), Positives = 129/153 (84%)
Frame = +1
Query: 145 MNVGTAHSEVNPNTRVMNSRGIWLSYVLAIGLLHVVLLSIPFVSVPVVWTLTNLIHNMGM 324
MNVG AHSEVNPNTRVMNSRG+WL+Y L +GLLH+VLLSIPF S GM
Sbjct: 1 MNVGVAHSEVNPNTRVMNSRGMWLTYGLGVGLLHIVLLSIPFFS--------------GM 46
Query: 325 YIFLHTVKGTPFETPDQGKARLLTHWEQMDYGVQFTASRKFLTITPIVLYFLTSFYTKYD 504
Y+FLH VKGTPFETPDQGKARLLTHWEQ+DYGVQFT+SRKF TI+PI+LYFL SFYTKYD
Sbjct: 47 YVFLHAVKGTPFETPDQGKARLLTHWEQLDYGVQFTSSRKFFTISPIILYFLASFYTKYD 106
Query: 505 QIHFILNTVSLMSVLIPKLPQLHGVRIFGINKY 603
HFILNT SL+SVLIPK+PQLHGVRIFGINKY
Sbjct: 107 PTHFILNTASLLSVLIPKMPQLHGVRIFGINKY 139
>ref|XP_848836.1| PREDICTED: similar to ORM1-like 2 [Canis familiaris].
Length = 94
Score = 119 bits (298), Expect = 5e-27
Identities = 67/138 (48%), Positives = 82/138 (59%), Gaps = 1/138 (0%)
Frame = +1
Query: 193 MNSRGIWLSYVLAIGLLHVVLLSIPFVSVPVVWTLTNLIHNMGMYIFLHTVKGTPFETPD 372
MNS+GIWL+Y++ +GLLHVVLLSIPF S+PVV TLTN+IH++ +
Sbjct: 1 MNSQGIWLAYIILVGLLHVVLLSIPFFSIPVVRTLTNVIHSLAIS--------------- 45
Query: 373 QGKARLLTHWEQMDYGVQFTASRKFLTITPIVLY-FLTSFYTKYDQIHFILNTVSLMSVL 549
+PI+LY L SFYTKYD HFI NT SL+SVL
Sbjct: 46 ----------------------------SPIILYHLLASFYTKYDAAHFI-NTASLLSVL 76
Query: 550 IPKLPQLHGVRIFGINKY 603
+PKLPQ HGVR+FGINKY
Sbjct: 77 LPKLPQFHGVRLFGINKY 94
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 44,305,542
Number of extensions: 1423907
Number of successful extensions: 7955
Number of sequences better than 1.0e-05: 9
Number of HSP's gapped: 7804
Number of HSP's successfully gapped: 10
Length of query: 343
Length of database: 18,874,504
Length adjustment: 104
Effective length of query: 239
Effective length of database: 15,407,560
Effective search space: 3682406840
Effective search space used: 3682406840
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-001332
(1031 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_644809.1| ORM1-like protein 3 [Homo sapiens]. 313 2e-85
Alignment gi|NP_001121622.1| ORM1-like protein 1 [Homo sapiens]. 282 3e-76
Alignment gi|NP_057551.1| ORM1-like protein 1 [Homo sapiens]. 282 3e-76
Alignment gi|NP_054901.1| ORM1-like protein 2 [Homo sapiens]. 275 4e-74
>ref|NP_644809.1| ORM1-like protein 3 [Homo sapiens].
Length = 153
Score = 313 bits (801), Expect = 2e-85
Identities = 151/153 (98%), Positives = 153/153 (100%)
Frame = +1
Query: 145 MNVGTAHSEVNPNTRVMNSRGIWLSYVLAIGLLHVVLLSIPFVSVPVVWTLTNLIHNMGM 324
MNVGTAHSEVNPNTRVMNSRGIWLSYVLAIGLLH+VLLSIPFVSVPVVWTLTNLIHNMGM
Sbjct: 1 MNVGTAHSEVNPNTRVMNSRGIWLSYVLAIGLLHIVLLSIPFVSVPVVWTLTNLIHNMGM 60
Query: 325 YIFLHTVKGTPFETPDQGKARLLTHWEQMDYGVQFTASRKFLTITPIVLYFLTSFYTKYD 504
YIFLHTVKGTPFETPDQGKARLLTHWEQMDYGVQFTASRKFLTITPIVLYFLTSFYTKYD
Sbjct: 61 YIFLHTVKGTPFETPDQGKARLLTHWEQMDYGVQFTASRKFLTITPIVLYFLTSFYTKYD 120
Query: 505 QIHFILNTVSLMSVLIPKLPQLHGVRIFGINKY 603
QIHF+LNTVSLMSVLIPKLPQLHGVRIFGINKY
Sbjct: 121 QIHFVLNTVSLMSVLIPKLPQLHGVRIFGINKY 153
>ref|NP_001121622.1| ORM1-like protein 1 [Homo sapiens].
Length = 153
Score = 282 bits (722), Expect = 3e-76
Identities = 129/153 (84%), Positives = 142/153 (92%)
Frame = +1
Query: 145 MNVGTAHSEVNPNTRVMNSRGIWLSYVLAIGLLHVVLLSIPFVSVPVVWTLTNLIHNMGM 324
MNVG AHSEVNPNTRVMNSRG+WL+Y L +GLLH+VLLSIPF SVPV WTLTN+IHN+GM
Sbjct: 1 MNVGVAHSEVNPNTRVMNSRGMWLTYALGVGLLHIVLLSIPFFSVPVAWTLTNIIHNLGM 60
Query: 325 YIFLHTVKGTPFETPDQGKARLLTHWEQMDYGVQFTASRKFLTITPIVLYFLTSFYTKYD 504
Y+FLH VKGTPFETPDQGKARLLTHWEQ+DYGVQFT+SRKF TI+PI+LYFL SFYTKYD
Sbjct: 61 YVFLHAVKGTPFETPDQGKARLLTHWEQLDYGVQFTSSRKFFTISPIILYFLASFYTKYD 120
Query: 505 QIHFILNTVSLMSVLIPKLPQLHGVRIFGINKY 603
HFILNT SL+SVLIPK+PQLHGVRIFGINKY
Sbjct: 121 PTHFILNTASLLSVLIPKMPQLHGVRIFGINKY 153
>ref|NP_057551.1| ORM1-like protein 1 [Homo sapiens].
Length = 153
Score = 282 bits (722), Expect = 3e-76
Identities = 129/153 (84%), Positives = 142/153 (92%)
Frame = +1
Query: 145 MNVGTAHSEVNPNTRVMNSRGIWLSYVLAIGLLHVVLLSIPFVSVPVVWTLTNLIHNMGM 324
MNVG AHSEVNPNTRVMNSRG+WL+Y L +GLLH+VLLSIPF SVPV WTLTN+IHN+GM
Sbjct: 1 MNVGVAHSEVNPNTRVMNSRGMWLTYALGVGLLHIVLLSIPFFSVPVAWTLTNIIHNLGM 60
Query: 325 YIFLHTVKGTPFETPDQGKARLLTHWEQMDYGVQFTASRKFLTITPIVLYFLTSFYTKYD 504
Y+FLH VKGTPFETPDQGKARLLTHWEQ+DYGVQFT+SRKF TI+PI+LYFL SFYTKYD
Sbjct: 61 YVFLHAVKGTPFETPDQGKARLLTHWEQLDYGVQFTSSRKFFTISPIILYFLASFYTKYD 120
Query: 505 QIHFILNTVSLMSVLIPKLPQLHGVRIFGINKY 603
HFILNT SL+SVLIPK+PQLHGVRIFGINKY
Sbjct: 121 PTHFILNTASLLSVLIPKMPQLHGVRIFGINKY 153
>ref|NP_054901.1| ORM1-like protein 2 [Homo sapiens].
Length = 153
Score = 275 bits (704), Expect = 4e-74
Identities = 124/153 (81%), Positives = 142/153 (92%)
Frame = +1
Query: 145 MNVGTAHSEVNPNTRVMNSRGIWLSYVLAIGLLHVVLLSIPFVSVPVVWTLTNLIHNMGM 324
MNVG AHSEVNPNTRVMNSRGIWL+Y++ +GLLH+VLLSIPF S+PVVWTLTN+IHN+
Sbjct: 1 MNVGVAHSEVNPNTRVMNSRGIWLAYIILVGLLHMVLLSIPFFSIPVVWTLTNVIHNLAT 60
Query: 325 YIFLHTVKGTPFETPDQGKARLLTHWEQMDYGVQFTASRKFLTITPIVLYFLTSFYTKYD 504
Y+FLHTVKGTPFETPDQGKARLLTHWEQMDYG+QFT+SRKFL+I+PIVLY L SFYTKYD
Sbjct: 61 YVFLHTVKGTPFETPDQGKARLLTHWEQMDYGLQFTSSRKFLSISPIVLYLLASFYTKYD 120
Query: 505 QIHFILNTVSLMSVLIPKLPQLHGVRIFGINKY 603
HF++NT SL+SVL+PKLPQ HGVR+FGINKY
Sbjct: 121 AAHFLINTASLLSVLLPKLPQFHGVRVFGINKY 153
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 43,164,724
Number of extensions: 1373122
Number of successful extensions: 7152
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 7058
Number of HSP's successfully gapped: 4
Length of query: 343
Length of database: 18,297,164
Length adjustment: 103
Effective length of query: 240
Effective length of database: 14,901,872
Effective search space: 3576449280
Effective search space used: 3576449280
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-001332
(1031 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_079937.1| ORM1-like protein 3 [Mus musculus]. 311 7e-85
Alignment gi|XP_889452.2| PREDICTED: ORM1-like protein 3-like [Mus muscul... 298 4e-81
Alignment gi|XP_914044.2| PREDICTED: ORM1-like protein 3-like [Mus muscul... 298 4e-81
Alignment gi|NP_663492.3| ORM1-like protein 1 [Mus musculus]. 281 6e-76
Alignment gi|NP_077142.1| ORM1-like protein 2 [Mus musculus]. 279 3e-75
Alignment gi|XP_485592.3| PREDICTED: ORM1-like protein 2-like [Mus muscul... 258 4e-69
Alignment gi|XP_915273.1| PREDICTED: ORM1-like protein 2-like [Mus muscul... 258 4e-69
>ref|NP_079937.1| ORM1-like protein 3 [Mus musculus].
Length = 153
Score = 311 bits (796), Expect = 7e-85
Identities = 150/153 (98%), Positives = 153/153 (100%)
Frame = +1
Query: 145 MNVGTAHSEVNPNTRVMNSRGIWLSYVLAIGLLHVVLLSIPFVSVPVVWTLTNLIHNMGM 324
MNVGTAHSEVNPNTRVMNSRGIWLSYVLAIGLLHVVLLSIPFVSVPVVWTLTNLIHN+GM
Sbjct: 1 MNVGTAHSEVNPNTRVMNSRGIWLSYVLAIGLLHVVLLSIPFVSVPVVWTLTNLIHNLGM 60
Query: 325 YIFLHTVKGTPFETPDQGKARLLTHWEQMDYGVQFTASRKFLTITPIVLYFLTSFYTKYD 504
YIFLHTVKGTPFETPDQGKARLLTHWEQMDYGVQFTASRKFLTITPIVLYFLTSFYTKYD
Sbjct: 61 YIFLHTVKGTPFETPDQGKARLLTHWEQMDYGVQFTASRKFLTITPIVLYFLTSFYTKYD 120
Query: 505 QIHFILNTVSLMSVLIPKLPQLHGVRIFGINKY 603
Q+HFILNTVSLM+VLIPKLPQLHGVRIFGINKY
Sbjct: 121 QVHFILNTVSLMTVLIPKLPQLHGVRIFGINKY 153
>ref|XP_889452.2| PREDICTED: ORM1-like protein 3-like [Mus musculus].
Length = 232
Score = 298 bits (764), Expect = 4e-81
Identities = 147/165 (89%), Positives = 154/165 (93%), Gaps = 8/165 (4%)
Frame = +1
Query: 130 ERGGRMNVGTAHSEVNPNTRVMNSRGIWLSYVLAI--------GLLHVVLLSIPFVSVPV 285
+RGGRMNVGTAHSEVNPNT VMNSRGIWLSYVLAI GLLHVVLLSIPFVSVPV
Sbjct: 67 KRGGRMNVGTAHSEVNPNTWVMNSRGIWLSYVLAIWLSYVLAIGLLHVVLLSIPFVSVPV 126
Query: 286 VWTLTNLIHNMGMYIFLHTVKGTPFETPDQGKARLLTHWEQMDYGVQFTASRKFLTITPI 465
VWTLTNLIHN+GMY+FLHTVKGTPFETPDQGKARLLTHWEQMD+ VQFTASRKFLTITPI
Sbjct: 127 VWTLTNLIHNLGMYVFLHTVKGTPFETPDQGKARLLTHWEQMDHEVQFTASRKFLTITPI 186
Query: 466 VLYFLTSFYTKYDQIHFILNTVSLMSVLIPKLPQLHGVRIFGINK 600
VLYFLTSFYTKYDQ+HFILNTVSLM+VL+PK PQLHGVRIFGINK
Sbjct: 187 VLYFLTSFYTKYDQVHFILNTVSLMTVLMPKFPQLHGVRIFGINK 231
>ref|XP_914044.2| PREDICTED: ORM1-like protein 3-like [Mus musculus].
Length = 232
Score = 298 bits (764), Expect = 4e-81
Identities = 147/165 (89%), Positives = 154/165 (93%), Gaps = 8/165 (4%)
Frame = +1
Query: 130 ERGGRMNVGTAHSEVNPNTRVMNSRGIWLSYVLAI--------GLLHVVLLSIPFVSVPV 285
+RGGRMNVGTAHSEVNPNT VMNSRGIWLSYVLAI GLLHVVLLSIPFVSVPV
Sbjct: 67 KRGGRMNVGTAHSEVNPNTWVMNSRGIWLSYVLAIWLSYVLAIGLLHVVLLSIPFVSVPV 126
Query: 286 VWTLTNLIHNMGMYIFLHTVKGTPFETPDQGKARLLTHWEQMDYGVQFTASRKFLTITPI 465
VWTLTNLIHN+GMY+FLHTVKGTPFETPDQGKARLLTHWEQMD+ VQFTASRKFLTITPI
Sbjct: 127 VWTLTNLIHNLGMYVFLHTVKGTPFETPDQGKARLLTHWEQMDHEVQFTASRKFLTITPI 186
Query: 466 VLYFLTSFYTKYDQIHFILNTVSLMSVLIPKLPQLHGVRIFGINK 600
VLYFLTSFYTKYDQ+HFILNTVSLM+VL+PK PQLHGVRIFGINK
Sbjct: 187 VLYFLTSFYTKYDQVHFILNTVSLMTVLMPKFPQLHGVRIFGINK 231
>ref|NP_663492.3| ORM1-like protein 1 [Mus musculus].
Length = 153
Score = 281 bits (719), Expect = 6e-76
Identities = 128/153 (83%), Positives = 142/153 (92%)
Frame = +1
Query: 145 MNVGTAHSEVNPNTRVMNSRGIWLSYVLAIGLLHVVLLSIPFVSVPVVWTLTNLIHNMGM 324
MNVG AHSEVNPNTRVMNSRG+WL+Y L +GLLH+VLLSIPF SVPV WTLTN+IHN+GM
Sbjct: 1 MNVGVAHSEVNPNTRVMNSRGMWLTYALGVGLLHIVLLSIPFCSVPVAWTLTNIIHNLGM 60
Query: 325 YIFLHTVKGTPFETPDQGKARLLTHWEQMDYGVQFTASRKFLTITPIVLYFLTSFYTKYD 504
Y+FLH VKGTPFETPDQG+ARLLTHWEQ+DYGVQFT+SRKF TI+PI+LYFL SFYTKYD
Sbjct: 61 YVFLHAVKGTPFETPDQGRARLLTHWEQLDYGVQFTSSRKFFTISPIILYFLASFYTKYD 120
Query: 505 QIHFILNTVSLMSVLIPKLPQLHGVRIFGINKY 603
HFILNT SL+SVLIPK+PQLHGVRIFGINKY
Sbjct: 121 PTHFILNTASLLSVLIPKMPQLHGVRIFGINKY 153
>ref|NP_077142.1| ORM1-like protein 2 [Mus musculus].
Length = 153
Score = 279 bits (713), Expect = 3e-75
Identities = 127/153 (83%), Positives = 143/153 (93%)
Frame = +1
Query: 145 MNVGTAHSEVNPNTRVMNSRGIWLSYVLAIGLLHVVLLSIPFVSVPVVWTLTNLIHNMGM 324
MNVG AHSEVNPNTRVMNSRGIWL+Y++ +GLLHVVLLSIPF S+PVVWTLTN+IHN+ M
Sbjct: 1 MNVGVAHSEVNPNTRVMNSRGIWLAYIILVGLLHVVLLSIPFFSIPVVWTLTNVIHNLAM 60
Query: 325 YIFLHTVKGTPFETPDQGKARLLTHWEQMDYGVQFTASRKFLTITPIVLYFLTSFYTKYD 504
YIFLHTVKGTPFETPDQGKARLLTHWEQMDYG+QFT+SRKFL+I+PIVLY L SFYTKYD
Sbjct: 61 YIFLHTVKGTPFETPDQGKARLLTHWEQMDYGLQFTSSRKFLSISPIVLYLLASFYTKYD 120
Query: 505 QIHFILNTVSLMSVLIPKLPQLHGVRIFGINKY 603
HF++NT SL+SVL+PKLPQ HGVR+FGINKY
Sbjct: 121 AAHFLINTASLLSVLLPKLPQFHGVRLFGINKY 153
>ref|XP_485592.3| PREDICTED: ORM1-like protein 2-like [Mus musculus].
Length = 153
Score = 258 bits (660), Expect = 4e-69
Identities = 116/153 (75%), Positives = 137/153 (89%)
Frame = +1
Query: 145 MNVGTAHSEVNPNTRVMNSRGIWLSYVLAIGLLHVVLLSIPFVSVPVVWTLTNLIHNMGM 324
MNVG AHSEVNPNT VMNS GIWL+Y++++GLLHVVLLSIPF S+PV+WTLTN+IHN+ M
Sbjct: 1 MNVGVAHSEVNPNTLVMNSLGIWLAYIISVGLLHVVLLSIPFFSIPVIWTLTNVIHNLAM 60
Query: 325 YIFLHTVKGTPFETPDQGKARLLTHWEQMDYGVQFTASRKFLTITPIVLYFLTSFYTKYD 504
YIF HTVKGTPFETPDQGK +LLTHW QMDYG+QFT+SRKFL+I+PI+LY L SFYTK D
Sbjct: 61 YIFPHTVKGTPFETPDQGKGQLLTHWGQMDYGLQFTSSRKFLSISPIILYLLASFYTKCD 120
Query: 505 QIHFILNTVSLMSVLIPKLPQLHGVRIFGINKY 603
HF++NT SL+S+L+PKLPQ HGV +FGINKY
Sbjct: 121 AAHFLINTASLLSMLLPKLPQFHGVHLFGINKY 153
>ref|XP_915273.1| PREDICTED: ORM1-like protein 2-like [Mus musculus].
Length = 153
Score = 258 bits (660), Expect = 4e-69
Identities = 116/153 (75%), Positives = 137/153 (89%)
Frame = +1
Query: 145 MNVGTAHSEVNPNTRVMNSRGIWLSYVLAIGLLHVVLLSIPFVSVPVVWTLTNLIHNMGM 324
MNVG AHSEVNPNT VMNS GIWL+Y++++GLLHVVLLSIPF S+PV+WTLTN+IHN+ M
Sbjct: 1 MNVGVAHSEVNPNTLVMNSLGIWLAYIISVGLLHVVLLSIPFFSIPVIWTLTNVIHNLAM 60
Query: 325 YIFLHTVKGTPFETPDQGKARLLTHWEQMDYGVQFTASRKFLTITPIVLYFLTSFYTKYD 504
YIF HTVKGTPFETPDQGK +LLTHW QMDYG+QFT+SRKFL+I+PI+LY L SFYTK D
Sbjct: 61 YIFPHTVKGTPFETPDQGKGQLLTHWGQMDYGLQFTSSRKFLSISPIILYLLASFYTKCD 120
Query: 505 QIHFILNTVSLMSVLIPKLPQLHGVRIFGINKY 603
HF++NT SL+S+L+PKLPQ HGV +FGINKY
Sbjct: 121 AAHFLINTASLLSMLLPKLPQFHGVHLFGINKY 153
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 36,223,974
Number of extensions: 1127192
Number of successful extensions: 5469
Number of sequences better than 1.0e-05: 7
Number of HSP's gapped: 5411
Number of HSP's successfully gapped: 7
Length of query: 343
Length of database: 15,617,559
Length adjustment: 102
Effective length of query: 241
Effective length of database: 12,553,887
Effective search space: 3025486767
Effective search space used: 3025486767
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-001332
(1031 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_003131540.1| PREDICTED: ORM1-like protein 3-like isoform ... 313 8e-86
Alignment gi|XP_003358108.1| PREDICTED: ORM1-like protein 3-like isoform ... 313 8e-86
Alignment gi|XP_003358107.1| PREDICTED: ORM1-like protein 3-like isoform ... 313 8e-86
Alignment gi|XP_003131548.1| PREDICTED: ORM1-like protein 3-like isoform ... 313 8e-86
Alignment gi|XP_003131546.1| PREDICTED: ORM1-like protein 3-like isoform ... 313 8e-86
Alignment gi|XP_003131547.1| PREDICTED: ORM1-like protein 3-like isoform ... 313 8e-86
Alignment gi|XP_003359640.1| PREDICTED: hypothetical protein LOC100155491... 282 2e-76
Alignment gi|XP_001926384.1| PREDICTED: hypothetical protein LOC100155491... 282 2e-76
Alignment gi|XP_001928873.1| PREDICTED: ORM1-like protein 2 isoform 1 [Su... 280 9e-76
Alignment gi|XP_003126305.1| PREDICTED: ORM1-like protein 2 isoform 2 [Su... 280 9e-76
>ref|XP_003131540.1| PREDICTED: ORM1-like protein 3-like isoform 1 [Sus scrofa].
Length = 153
Score = 313 bits (803), Expect = 8e-86
Identities = 153/153 (100%), Positives = 153/153 (100%)
Frame = +1
Query: 145 MNVGTAHSEVNPNTRVMNSRGIWLSYVLAIGLLHVVLLSIPFVSVPVVWTLTNLIHNMGM 324
MNVGTAHSEVNPNTRVMNSRGIWLSYVLAIGLLHVVLLSIPFVSVPVVWTLTNLIHNMGM
Sbjct: 1 MNVGTAHSEVNPNTRVMNSRGIWLSYVLAIGLLHVVLLSIPFVSVPVVWTLTNLIHNMGM 60
Query: 325 YIFLHTVKGTPFETPDQGKARLLTHWEQMDYGVQFTASRKFLTITPIVLYFLTSFYTKYD 504
YIFLHTVKGTPFETPDQGKARLLTHWEQMDYGVQFTASRKFLTITPIVLYFLTSFYTKYD
Sbjct: 61 YIFLHTVKGTPFETPDQGKARLLTHWEQMDYGVQFTASRKFLTITPIVLYFLTSFYTKYD 120
Query: 505 QIHFILNTVSLMSVLIPKLPQLHGVRIFGINKY 603
QIHFILNTVSLMSVLIPKLPQLHGVRIFGINKY
Sbjct: 121 QIHFILNTVSLMSVLIPKLPQLHGVRIFGINKY 153
>ref|XP_003358108.1| PREDICTED: ORM1-like protein 3-like isoform 3 [Sus scrofa].
Length = 153
Score = 313 bits (803), Expect = 8e-86
Identities = 153/153 (100%), Positives = 153/153 (100%)
Frame = +1
Query: 145 MNVGTAHSEVNPNTRVMNSRGIWLSYVLAIGLLHVVLLSIPFVSVPVVWTLTNLIHNMGM 324
MNVGTAHSEVNPNTRVMNSRGIWLSYVLAIGLLHVVLLSIPFVSVPVVWTLTNLIHNMGM
Sbjct: 1 MNVGTAHSEVNPNTRVMNSRGIWLSYVLAIGLLHVVLLSIPFVSVPVVWTLTNLIHNMGM 60
Query: 325 YIFLHTVKGTPFETPDQGKARLLTHWEQMDYGVQFTASRKFLTITPIVLYFLTSFYTKYD 504
YIFLHTVKGTPFETPDQGKARLLTHWEQMDYGVQFTASRKFLTITPIVLYFLTSFYTKYD
Sbjct: 61 YIFLHTVKGTPFETPDQGKARLLTHWEQMDYGVQFTASRKFLTITPIVLYFLTSFYTKYD 120
Query: 505 QIHFILNTVSLMSVLIPKLPQLHGVRIFGINKY 603
QIHFILNTVSLMSVLIPKLPQLHGVRIFGINKY
Sbjct: 121 QIHFILNTVSLMSVLIPKLPQLHGVRIFGINKY 153
>ref|XP_003358107.1| PREDICTED: ORM1-like protein 3-like isoform 2 [Sus scrofa].
Length = 153
Score = 313 bits (803), Expect = 8e-86
Identities = 153/153 (100%), Positives = 153/153 (100%)
Frame = +1
Query: 145 MNVGTAHSEVNPNTRVMNSRGIWLSYVLAIGLLHVVLLSIPFVSVPVVWTLTNLIHNMGM 324
MNVGTAHSEVNPNTRVMNSRGIWLSYVLAIGLLHVVLLSIPFVSVPVVWTLTNLIHNMGM
Sbjct: 1 MNVGTAHSEVNPNTRVMNSRGIWLSYVLAIGLLHVVLLSIPFVSVPVVWTLTNLIHNMGM 60
Query: 325 YIFLHTVKGTPFETPDQGKARLLTHWEQMDYGVQFTASRKFLTITPIVLYFLTSFYTKYD 504
YIFLHTVKGTPFETPDQGKARLLTHWEQMDYGVQFTASRKFLTITPIVLYFLTSFYTKYD
Sbjct: 61 YIFLHTVKGTPFETPDQGKARLLTHWEQMDYGVQFTASRKFLTITPIVLYFLTSFYTKYD 120
Query: 505 QIHFILNTVSLMSVLIPKLPQLHGVRIFGINKY 603
QIHFILNTVSLMSVLIPKLPQLHGVRIFGINKY
Sbjct: 121 QIHFILNTVSLMSVLIPKLPQLHGVRIFGINKY 153
>ref|XP_003131548.1| PREDICTED: ORM1-like protein 3-like isoform 3 [Sus scrofa].
Length = 153
Score = 313 bits (803), Expect = 8e-86
Identities = 153/153 (100%), Positives = 153/153 (100%)
Frame = +1
Query: 145 MNVGTAHSEVNPNTRVMNSRGIWLSYVLAIGLLHVVLLSIPFVSVPVVWTLTNLIHNMGM 324
MNVGTAHSEVNPNTRVMNSRGIWLSYVLAIGLLHVVLLSIPFVSVPVVWTLTNLIHNMGM
Sbjct: 1 MNVGTAHSEVNPNTRVMNSRGIWLSYVLAIGLLHVVLLSIPFVSVPVVWTLTNLIHNMGM 60
Query: 325 YIFLHTVKGTPFETPDQGKARLLTHWEQMDYGVQFTASRKFLTITPIVLYFLTSFYTKYD 504
YIFLHTVKGTPFETPDQGKARLLTHWEQMDYGVQFTASRKFLTITPIVLYFLTSFYTKYD
Sbjct: 61 YIFLHTVKGTPFETPDQGKARLLTHWEQMDYGVQFTASRKFLTITPIVLYFLTSFYTKYD 120
Query: 505 QIHFILNTVSLMSVLIPKLPQLHGVRIFGINKY 603
QIHFILNTVSLMSVLIPKLPQLHGVRIFGINKY
Sbjct: 121 QIHFILNTVSLMSVLIPKLPQLHGVRIFGINKY 153
>ref|XP_003131546.1| PREDICTED: ORM1-like protein 3-like isoform 1 [Sus scrofa].
Length = 153
Score = 313 bits (803), Expect = 8e-86
Identities = 153/153 (100%), Positives = 153/153 (100%)
Frame = +1
Query: 145 MNVGTAHSEVNPNTRVMNSRGIWLSYVLAIGLLHVVLLSIPFVSVPVVWTLTNLIHNMGM 324
MNVGTAHSEVNPNTRVMNSRGIWLSYVLAIGLLHVVLLSIPFVSVPVVWTLTNLIHNMGM
Sbjct: 1 MNVGTAHSEVNPNTRVMNSRGIWLSYVLAIGLLHVVLLSIPFVSVPVVWTLTNLIHNMGM 60
Query: 325 YIFLHTVKGTPFETPDQGKARLLTHWEQMDYGVQFTASRKFLTITPIVLYFLTSFYTKYD 504
YIFLHTVKGTPFETPDQGKARLLTHWEQMDYGVQFTASRKFLTITPIVLYFLTSFYTKYD
Sbjct: 61 YIFLHTVKGTPFETPDQGKARLLTHWEQMDYGVQFTASRKFLTITPIVLYFLTSFYTKYD 120
Query: 505 QIHFILNTVSLMSVLIPKLPQLHGVRIFGINKY 603
QIHFILNTVSLMSVLIPKLPQLHGVRIFGINKY
Sbjct: 121 QIHFILNTVSLMSVLIPKLPQLHGVRIFGINKY 153
>ref|XP_003131547.1| PREDICTED: ORM1-like protein 3-like isoform 2 [Sus scrofa].
Length = 153
Score = 313 bits (803), Expect = 8e-86
Identities = 153/153 (100%), Positives = 153/153 (100%)
Frame = +1
Query: 145 MNVGTAHSEVNPNTRVMNSRGIWLSYVLAIGLLHVVLLSIPFVSVPVVWTLTNLIHNMGM 324
MNVGTAHSEVNPNTRVMNSRGIWLSYVLAIGLLHVVLLSIPFVSVPVVWTLTNLIHNMGM
Sbjct: 1 MNVGTAHSEVNPNTRVMNSRGIWLSYVLAIGLLHVVLLSIPFVSVPVVWTLTNLIHNMGM 60
Query: 325 YIFLHTVKGTPFETPDQGKARLLTHWEQMDYGVQFTASRKFLTITPIVLYFLTSFYTKYD 504
YIFLHTVKGTPFETPDQGKARLLTHWEQMDYGVQFTASRKFLTITPIVLYFLTSFYTKYD
Sbjct: 61 YIFLHTVKGTPFETPDQGKARLLTHWEQMDYGVQFTASRKFLTITPIVLYFLTSFYTKYD 120
Query: 505 QIHFILNTVSLMSVLIPKLPQLHGVRIFGINKY 603
QIHFILNTVSLMSVLIPKLPQLHGVRIFGINKY
Sbjct: 121 QIHFILNTVSLMSVLIPKLPQLHGVRIFGINKY 153
>ref|XP_003359640.1| PREDICTED: hypothetical protein LOC100155491 [Sus scrofa].
Length = 153
Score = 282 bits (721), Expect = 2e-76
Identities = 129/153 (84%), Positives = 142/153 (92%)
Frame = +1
Query: 145 MNVGTAHSEVNPNTRVMNSRGIWLSYVLAIGLLHVVLLSIPFVSVPVVWTLTNLIHNMGM 324
MNVG AHSEVNPNTRVMNSRG+WL+Y L +GLLH+VLLSIPF SVPV WTLTN+IHN+GM
Sbjct: 1 MNVGVAHSEVNPNTRVMNSRGMWLTYALGVGLLHIVLLSIPFFSVPVAWTLTNVIHNLGM 60
Query: 325 YIFLHTVKGTPFETPDQGKARLLTHWEQMDYGVQFTASRKFLTITPIVLYFLTSFYTKYD 504
Y+FLH VKGTPFETPDQGKARLLTHWEQ+DYGVQFT+SRKF TI+PI+LYFL SFYTKYD
Sbjct: 61 YVFLHAVKGTPFETPDQGKARLLTHWEQLDYGVQFTSSRKFFTISPIILYFLASFYTKYD 120
Query: 505 QIHFILNTVSLMSVLIPKLPQLHGVRIFGINKY 603
HFILNT SL+SVLIPK+PQLHGVRIFGINKY
Sbjct: 121 PTHFILNTASLLSVLIPKMPQLHGVRIFGINKY 153
>ref|XP_001926384.1| PREDICTED: hypothetical protein LOC100155491 [Sus scrofa].
Length = 153
Score = 282 bits (721), Expect = 2e-76
Identities = 129/153 (84%), Positives = 142/153 (92%)
Frame = +1
Query: 145 MNVGTAHSEVNPNTRVMNSRGIWLSYVLAIGLLHVVLLSIPFVSVPVVWTLTNLIHNMGM 324
MNVG AHSEVNPNTRVMNSRG+WL+Y L +GLLH+VLLSIPF SVPV WTLTN+IHN+GM
Sbjct: 1 MNVGVAHSEVNPNTRVMNSRGMWLTYALGVGLLHIVLLSIPFFSVPVAWTLTNVIHNLGM 60
Query: 325 YIFLHTVKGTPFETPDQGKARLLTHWEQMDYGVQFTASRKFLTITPIVLYFLTSFYTKYD 504
Y+FLH VKGTPFETPDQGKARLLTHWEQ+DYGVQFT+SRKF TI+PI+LYFL SFYTKYD
Sbjct: 61 YVFLHAVKGTPFETPDQGKARLLTHWEQLDYGVQFTSSRKFFTISPIILYFLASFYTKYD 120
Query: 505 QIHFILNTVSLMSVLIPKLPQLHGVRIFGINKY 603
HFILNT SL+SVLIPK+PQLHGVRIFGINKY
Sbjct: 121 PTHFILNTASLLSVLIPKMPQLHGVRIFGINKY 153
>ref|XP_001928873.1| PREDICTED: ORM1-like protein 2 isoform 1 [Sus scrofa].
Length = 153
Score = 280 bits (716), Expect = 9e-76
Identities = 127/153 (83%), Positives = 144/153 (94%)
Frame = +1
Query: 145 MNVGTAHSEVNPNTRVMNSRGIWLSYVLAIGLLHVVLLSIPFVSVPVVWTLTNLIHNMGM 324
MNVG AHSEVNPNTRVMNSRGIWL+Y++ +GLLHVVLLSIPF S+PVVWTLTN+IHN+ M
Sbjct: 1 MNVGVAHSEVNPNTRVMNSRGIWLAYIILVGLLHVVLLSIPFFSIPVVWTLTNVIHNLAM 60
Query: 325 YIFLHTVKGTPFETPDQGKARLLTHWEQMDYGVQFTASRKFLTITPIVLYFLTSFYTKYD 504
Y+FLHTVKGTPFETPDQGKARLLTHWEQMDYG+QFT+SRKFL+I+PIVLY L SFYTKYD
Sbjct: 61 YVFLHTVKGTPFETPDQGKARLLTHWEQMDYGLQFTSSRKFLSISPIVLYLLASFYTKYD 120
Query: 505 QIHFILNTVSLMSVLIPKLPQLHGVRIFGINKY 603
HF++NTVSL+SVL+PKLPQ HGVR+FGINKY
Sbjct: 121 AAHFLINTVSLLSVLLPKLPQFHGVRLFGINKY 153
>ref|XP_003126305.1| PREDICTED: ORM1-like protein 2 isoform 2 [Sus scrofa].
Length = 153
Score = 280 bits (716), Expect = 9e-76
Identities = 127/153 (83%), Positives = 144/153 (94%)
Frame = +1
Query: 145 MNVGTAHSEVNPNTRVMNSRGIWLSYVLAIGLLHVVLLSIPFVSVPVVWTLTNLIHNMGM 324
MNVG AHSEVNPNTRVMNSRGIWL+Y++ +GLLHVVLLSIPF S+PVVWTLTN+IHN+ M
Sbjct: 1 MNVGVAHSEVNPNTRVMNSRGIWLAYIILVGLLHVVLLSIPFFSIPVVWTLTNVIHNLAM 60
Query: 325 YIFLHTVKGTPFETPDQGKARLLTHWEQMDYGVQFTASRKFLTITPIVLYFLTSFYTKYD 504
Y+FLHTVKGTPFETPDQGKARLLTHWEQMDYG+QFT+SRKFL+I+PIVLY L SFYTKYD
Sbjct: 61 YVFLHTVKGTPFETPDQGKARLLTHWEQMDYGLQFTSSRKFLSISPIVLYLLASFYTKYD 120
Query: 505 QIHFILNTVSLMSVLIPKLPQLHGVRIFGINKY 603
HF++NTVSL+SVL+PKLPQ HGVR+FGINKY
Sbjct: 121 AAHFLINTVSLLSVLLPKLPQFHGVRLFGINKY 153
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 27,505,984
Number of extensions: 895461
Number of successful extensions: 4957
Number of sequences better than 1.0e-05: 13
Number of HSP's gapped: 4892
Number of HSP's successfully gapped: 13
Length of query: 343
Length of database: 11,343,932
Length adjustment: 100
Effective length of query: 243
Effective length of database: 8,854,232
Effective search space: 2151578376
Effective search space used: 2151578376
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-001332
(1031 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|GL893298.2| Sus scrofa unplaced genomic scaffold ChrUScaf1183 684 0.0
Sscrofa_Chr12 684 0.0
Sscrofa_Chr05 70 3e-09
>gb|GL893298.2| Sus scrofa unplaced genomic scaffold ChrUScaf1183
Length = 88797
Score = 684 bits (345), Expect = 0.0
Identities = 345/345 (100%)
Strand = Plus / Minus
Query: 471 gtacttcctcaccagcttctacaccaagtacgaccagatccacttcatcctcaacactgt 530
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9639 gtacttcctcaccagcttctacaccaagtacgaccagatccacttcatcctcaacactgt 9580
Query: 531 gtccctgatgagcgtgctcatccccaagctgccccagctccacggcgtgcggatttttgg 590
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9579 gtccctgatgagcgtgctcatccccaagctgccccagctccacggcgtgcggatttttgg 9520
Query: 591 aatcaacaagtactgagggtgcagccccttcccctgcccgggatggcagggaggggcaga 650
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9519 aatcaacaagtactgagggtgcagccccttcccctgcccgggatggcagggaggggcaga 9460
Query: 651 agcctgtgccgtgaggctgacgatgacggaaggagcctctgggtaccgccagggatggag 710
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9459 agcctgtgccgtgaggctgacgatgacggaaggagcctctgggtaccgccagggatggag 9400
Query: 711 gtggcgcctcggggccccagtttccccctctcttcccccgctagcagactcgaagtagct 770
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9399 gtggcgcctcggggccccagtttccccctctcttcccccgctagcagactcgaagtagct 9340
Query: 771 tgtagtgggttggggcgggccccgctggggctctgacccctgcga 815
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9339 tgtagtgggttggggcgggccccgctggggctctgacccctgcga 9295
Score = 341 bits (172), Expect = 5e-91
Identities = 184/188 (97%)
Strand = Plus / Minus
Query: 844 ggatagagaccctgcagggtggtcttggaatgggctgggccgctgggctggacacagacc 903
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9266 ggatagagaccctgcagggtggtcttggaatgggctgggccgctgggctggacacagacc 9207
Query: 904 cgcaaaggtgaggcaagaggccagggaacgccccggctcccttgctcatcctcagactgc 963
|||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9206 tgcaaggttgaggcaagaggccagggaacgccccggctcccttgctcatcctcagactgc 9147
Query: 964 taaagcactttaccccctgtgacgggggcagaggggacggtacagcttccagtttgtttc 1023
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 9146 taaagcactttaccccctgtgacgggggcagaggggacggtacagcttctagtttgtttc 9087
Query: 1024 actttaat 1031
||||||||
Sbjct: 9086 actttaat 9079
Score = 307 bits (155), Expect = 6e-81
Identities = 155/155 (100%)
Strand = Plus / Minus
Query: 318 gggcatgtacatcttcctgcacacggtgaaggggacaccctttgagaccccggaccaggg 377
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10197 gggcatgtacatcttcctgcacacggtgaaggggacaccctttgagaccccggaccaggg 10138
Query: 378 caaggcaaggctgctgacccactgggagcagatggactatggggtccagttcacggcgtc 437
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10137 caaggcaaggctgctgacccactgggagcagatggactatggggtccagttcacggcgtc 10078
Query: 438 tcggaaattcctgaccatcacccccatcgtgctgt 472
|||||||||||||||||||||||||||||||||||
Sbjct: 10077 tcggaaattcctgaccatcacccccatcgtgctgt 10043
Score = 204 bits (103), Expect = 7e-50
Identities = 103/103 (100%)
Strand = Plus / Minus
Query: 217 tcctatgtgctggccatcgggctcctgcacgtcgtgctgctcagcatcccctttgtgagc 276
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11259 tcctatgtgctggccatcgggctcctgcacgtcgtgctgctcagcatcccctttgtgagc 11200
Query: 277 gtccccgttgtctggaccctcaccaacctcatccacaacatgg 319
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11199 gtccccgttgtctggaccctcaccaacctcatccacaacatgg 11157
Score = 83.8 bits (42), Expect = 2e-13
Identities = 42/42 (100%)
Strand = Plus / Minus
Query: 118 gaagagcagcaggagaggggcggcaggatgaatgtgggaacg 159
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11401 gaagagcagcaggagaggggcggcaggatgaatgtgggaacg 11360
Score = 58.0 bits (29), Expect = 1e-05
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 37 gcgggttattacagctgctggagcagcag 65
|||||||||||||||||||||||||||||
Sbjct: 15212 gcgggttattacagctgctggagcagcag 15184
>Sscrofa_Chr12
|| Length = 63588571
Score = 684 bits (345), Expect = 0.0
Identities = 345/345 (100%)
Strand = Plus / Plus
Query: 471 gtacttcctcaccagcttctacaccaagtacgaccagatccacttcatcctcaacactgt 530
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22874435 gtacttcctcaccagcttctacaccaagtacgaccagatccacttcatcctcaacactgt 22874494
Query: 531 gtccctgatgagcgtgctcatccccaagctgccccagctccacggcgtgcggatttttgg 590
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22874495 gtccctgatgagcgtgctcatccccaagctgccccagctccacggcgtgcggatttttgg 22874554
Query: 591 aatcaacaagtactgagggtgcagccccttcccctgcccgggatggcagggaggggcaga 650
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22874555 aatcaacaagtactgagggtgcagccccttcccctgcccgggatggcagggaggggcaga 22874614
Query: 651 agcctgtgccgtgaggctgacgatgacggaaggagcctctgggtaccgccagggatggag 710
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22874615 agcctgtgccgtgaggctgacgatgacggaaggagcctctgggtaccgccagggatggag 22874674
Query: 711 gtggcgcctcggggccccagtttccccctctcttcccccgctagcagactcgaagtagct 770
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22874675 gtggcgcctcggggccccagtttccccctctcttcccccgctagcagactcgaagtagct 22874734
Query: 771 tgtagtgggttggggcgggccccgctggggctctgacccctgcga 815
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22874735 tgtagtgggttggggcgggccccgctggggctctgacccctgcga 22874779
Score = 400 bits (202), Expect = e-109
Identities = 202/202 (100%)
Strand = Plus / Plus
Query: 118 gaagagcagcaggagaggggcggcaggatgaatgtgggaacggcgcacagcgaggtgaac 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22872787 gaagagcagcaggagaggggcggcaggatgaatgtgggaacggcgcacagcgaggtgaac 22872846
Query: 178 cccaacacgcgggtgatgaacagccgcggcatctggctgtcctatgtgctggccatcggg 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22872847 cccaacacgcgggtgatgaacagccgcggcatctggctgtcctatgtgctggccatcggg 22872906
Query: 238 ctcctgcacgtcgtgctgctcagcatcccctttgtgagcgtccccgttgtctggaccctc 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22872907 ctcctgcacgtcgtgctgctcagcatcccctttgtgagcgtccccgttgtctggaccctc 22872966
Query: 298 accaacctcatccacaacatgg 319
||||||||||||||||||||||
Sbjct: 22872967 accaacctcatccacaacatgg 22872988
Score = 341 bits (172), Expect = 5e-91
Identities = 184/188 (97%)
Strand = Plus / Plus
Query: 844 ggatagagaccctgcagggtggtcttggaatgggctgggccgctgggctggacacagacc 903
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22874808 ggatagagaccctgcagggtggtcttggaatgggctgggccgctgggctggacacagacc 22874867
Query: 904 cgcaaaggtgaggcaagaggccagggaacgccccggctcccttgctcatcctcagactgc 963
|||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22874868 tgcaaggttgaggcaagaggccagggaacgccccggctcccttgctcatcctcagactgc 22874927
Query: 964 taaagcactttaccccctgtgacgggggcagaggggacggtacagcttccagtttgtttc 1023
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 22874928 taaagcactttaccccctgtgacgggggcagaggggacggtacagcttctagtttgtttc 22874987
Query: 1024 actttaat 1031
||||||||
Sbjct: 22874988 actttaat 22874995
Score = 307 bits (155), Expect = 6e-81
Identities = 155/155 (100%)
Strand = Plus / Plus
Query: 318 gggcatgtacatcttcctgcacacggtgaaggggacaccctttgagaccccggaccaggg 377
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22873877 gggcatgtacatcttcctgcacacggtgaaggggacaccctttgagaccccggaccaggg 22873936
Query: 378 caaggcaaggctgctgacccactgggagcagatggactatggggtccagttcacggcgtc 437
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22873937 caaggcaaggctgctgacccactgggagcagatggactatggggtccagttcacggcgtc 22873996
Query: 438 tcggaaattcctgaccatcacccccatcgtgctgt 472
|||||||||||||||||||||||||||||||||||
Sbjct: 22873997 tcggaaattcctgaccatcacccccatcgtgctgt 22874031
Score = 129 bits (65), Expect = 3e-27
Identities = 65/65 (100%)
Strand = Plus / Plus
Query: 1 gattcggcccgagctgccagcggggtggctgccgccgcgggttattacagctgctggagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22869421 gattcggcccgagctgccagcggggtggctgccgccgcgggttattacagctgctggagc 22869480
Query: 61 agcag 65
|||||
Sbjct: 22869481 agcag 22869485
>Sscrofa_Chr05
|| Length = 111506441
Score = 69.9 bits (35), Expect = 3e-09
Identities = 80/95 (84%)
Strand = Plus / Plus
Query: 331 ttcctgcacacggtgaaggggacaccctttgagaccccggaccagggcaaggcaaggctg 390
||||| || |||||||| ||||||||||||||||| || ||||| || ||||| ||||
Sbjct: 22743704 ttcctacatacggtgaaagggacaccctttgagactcccgaccaaggaaaggctcggcta 22743763
Query: 391 ctgacccactgggagcagatggactatggggtcca 425
|| || |||||||| ||||||||||| ||| ||||
Sbjct: 22743764 cttacacactgggaacagatggactacgggctcca 22743798
Score = 63.9 bits (32), Expect = 2e-07
Identities = 68/80 (85%)
Strand = Plus / Plus
Query: 142 aggatgaatgtgggaacggcgcacagcgaggtgaaccccaacacgcgggtgatgaacagc 201
|||||||||||||| ||| |||||||| || ||||||||||| || |||||||| ||
Sbjct: 22743348 aggatgaatgtgggggtggcacacagcgaagtaaaccccaacactcgagtgatgaatagt 22743407
Query: 202 cgcggcatctggctgtccta 221
|| |||||||||||| ||||
Sbjct: 22743408 cggggcatctggctggccta 22743427
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 24,790,829
Number of extensions: 179
Number of successful extensions: 179
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 179
Number of HSP's successfully gapped: 13
Length of query: 1031
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 1010
Effective length of database: 2,808,413,156
Effective search space: 2836497287560
Effective search space used: 2836497287560
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 29 (58.0 bits)