Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-001369
(1484 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001070266.1| sodium/potassium-transporting ATPase subunit... 871 0.0
Alignment gi|XP_002695120.1| PREDICTED: ATPase, Na+/K+ transporting, alph... 772 0.0
Alignment gi|XP_606264.5| PREDICTED: ATPase, Na+/K+ transporting, alpha 3... 758 0.0
Alignment gi|NP_001074993.1| sodium/potassium-transporting ATPase subunit... 756 0.0
Alignment gi|NP_001137575.1| sodium/potassium-transporting ATPase subunit... 668 0.0
Alignment gi|NP_001137561.1| potassium-transporting ATPase alpha chain 1 ... 612 e-175
Alignment gi|XP_002691916.1| PREDICTED: non-gastric H+,K+-ATPase-like [Bo... 607 e-174
Alignment gi|XP_609180.4| PREDICTED: hydrogen/potassium-exchanging ATPase... 607 e-174
Alignment gi|XP_002695065.1| PREDICTED: ATPase, H+/K+ exchanging, alpha p... 287 2e-77
Alignment gi|XP_002694791.1| PREDICTED: calcium-transporting ATPase type ... 177 2e-44
>ref|NP_001070266.1| sodium/potassium-transporting ATPase subunit alpha-1 precursor [Bos
taurus].
Length = 1021
Score = 871 bits (2250), Expect = 0.0
Identities = 443/494 (89%), Positives = 450/494 (91%)
Frame = +2
Query: 2 LCFLAYGIQAATEEEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQA 181
LCFLAYGIQAATEEEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQA
Sbjct: 108 LCFLAYGIQAATEEEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQA 167
Query: 182 LVIRNGEKMSINAEEVVVGDLVEVKGGDRIPADLRIISANGCKVDNSSLTGESEPQTRSP 361
LVIRNGEKMSINAEEVVVGDLVEVKGGDRIPADLRIISANGCKVDNSSLTGESEPQTRSP
Sbjct: 168 LVIRNGEKMSINAEEVVVGDLVEVKGGDRIPADLRIISANGCKVDNSSLTGESEPQTRSP 227
Query: 362 DFTNENPLETRNIAFFSTNCVEGTARGIVVYTGDRTVMGRIATLASGLEGGQTPXXXXXX 541
DFTNENPLETRNIAFFSTNCVEGTARGIVVYTGDRTVMGRIATLASGLEGGQTP
Sbjct: 228 DFTNENPLETRNIAFFSTNCVEGTARGIVVYTGDRTVMGRIATLASGLEGGQTPIAAEIE 287
Query: 542 XXXXXXTGVAVFLGVSFFILSLILEYTWLEAVIFLIGIIVANVPEGXXXXXXXXXXXXXK 721
TGVAVFLGVSFFILSLILEYTWLEAVIFLIGIIVANVPEG K
Sbjct: 288 HFIHIITGVAVFLGVSFFILSLILEYTWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAK 347
Query: 722 RMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGV 901
RMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGV
Sbjct: 348 RMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGV 407
Query: 902 SFDKTSATWLALSRIAGLCNRAVFQANQENLPILKRAVAGDASESALLKCIELCCGSVKE 1081
SFDKTSATWLALSRIAGLCNRAVFQANQ+NLPILKRAVAGDASESALLKCIE+CCGSVKE
Sbjct: 408 SFDKTSATWLALSRIAGLCNRAVFQANQDNLPILKRAVAGDASESALLKCIEVCCGSVKE 467
Query: 1082 MRERYTKIVEIPFNSTNKYQLSIHKNPNTAEPRHLLVMKGAPEKDPGRCSSILIHGKGQP 1261
MRERYTKIVEIPFNSTNKYQLSIHKN N EPRHLLVMKGAPE+ RCSSILIHGK QP
Sbjct: 468 MRERYTKIVEIPFNSTNKYQLSIHKNANAGEPRHLLVMKGAPERILDRCSSILIHGKEQP 527
Query: 1262 LDEELKDAFQNAYLELGGPGKRVLGFCHFFLPDKQVPRSFQFDTDHVKFPLENLCLRGLI 1441
LDEELKDAFQNAYLELGG G+RVLGFCH LPD+Q P FQFDTD V FP++NLC GLI
Sbjct: 528 LDEELKDAFQNAYLELGGLGERVLGFCHLLLPDEQFPEGFQFDTDDVNFPVDNLCFVGLI 587
Query: 1442 SMNDPPRAXVPDAV 1483
SM DPPRA VPDAV
Sbjct: 588 SMIDPPRAAVPDAV 601
>ref|XP_002695120.1| PREDICTED: ATPase, Na+/K+ transporting, alpha 3 polypeptide [Bos
taurus].
Length = 975
Score = 772 bits (1993), Expect = 0.0
Identities = 388/494 (78%), Positives = 425/494 (86%)
Frame = +2
Query: 2 LCFLAYGIQAATEEEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQA 181
LCFLAYGIQA TE++P DNLYLG+VL+AVVIITGCFSYYQEAKSSKIMESFKNMVPQQA
Sbjct: 101 LCFLAYGIQAGTEDDPSGDNLYLGIVLAAVVIITGCFSYYQEAKSSKIMESFKNMVPQQA 160
Query: 182 LVIRNGEKMSINAEEVVVGDLVEVKGGDRIPADLRIISANGCKVDNSSLTGESEPQTRSP 361
LVIR GEKM +NAEEVVVGDLVE+KGGDR+PADLRIISA+GCKVDNSSLTGESEPQTRSP
Sbjct: 161 LVIREGEKMQVNAEEVVVGDLVEIKGGDRVPADLRIISAHGCKVDNSSLTGESEPQTRSP 220
Query: 362 DFTNENPLETRNIAFFSTNCVEGTARGIVVYTGDRTVMGRIATLASGLEGGQTPXXXXXX 541
D T++NPLETRNI FFSTNCVEGTARG+VV TGDRTVMGRIATLASGLE G+TP
Sbjct: 221 DCTHDNPLETRNITFFSTNCVEGTARGVVVATGDRTVMGRIATLASGLEVGKTPIAIEIE 280
Query: 542 XXXXXXTGVAVFLGVSFFILSLILEYTWLEAVIFLIGIIVANVPEGXXXXXXXXXXXXXK 721
TGVAVFLGVSFFILSLIL YTWLEAVIFLIGIIVANVPEG K
Sbjct: 281 HFIQLITGVAVFLGVSFFILSLILGYTWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAK 340
Query: 722 RMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGV 901
RMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTE+QSG
Sbjct: 341 RMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSGT 400
Query: 902 SFDKTSATWLALSRIAGLCNRAVFQANQENLPILKRAVAGDASESALLKCIELCCGSVKE 1081
SFDK+S TW+ALS IAGLCNRAVF+ Q+N+P+LKR VAGDASESALLKCIEL GSVK
Sbjct: 401 SFDKSSHTWVALSHIAGLCNRAVFKGGQDNVPVLKRDVAGDASESALLKCIELSSGSVKL 460
Query: 1082 MRERYTKIVEIPFNSTNKYQLSIHKNPNTAEPRHLLVMKGAPEKDPGRCSSILIHGKGQP 1261
MRER K+ EIPFNSTNKYQLSIH+ + + R+LLVMKGAPE+ RCS+IL+HGK QP
Sbjct: 461 MRERNKKVAEIPFNSTNKYQLSIHETEDPNDNRYLLVMKGAPERILDRCSTILLHGKEQP 520
Query: 1262 LDEELKDAFQNAYLELGGPGKRVLGFCHFFLPDKQVPRSFQFDTDHVKFPLENLCLRGLI 1441
LDEE+K+AFQNAYLELGG G+RVLGFCH++LP++Q P+ F FD D V F +NLC GL+
Sbjct: 521 LDEEMKEAFQNAYLELGGLGERVLGFCHYYLPEEQFPKGFAFDCDDVNFTTDNLCFVGLM 580
Query: 1442 SMNDPPRAXVPDAV 1483
SM DPPRA VPDAV
Sbjct: 581 SMIDPPRAAVPDAV 594
>ref|XP_606264.5| PREDICTED: ATPase, Na+/K+ transporting, alpha 3 polypeptide isoform 1
[Bos taurus].
Length = 1045
Score = 758 bits (1958), Expect = 0.0
Identities = 384/495 (77%), Positives = 423/495 (85%), Gaps = 1/495 (0%)
Frame = +2
Query: 2 LCFLAYGIQAATEEEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQ-Q 178
LCFLAYGIQA TE++P DNLYLG+VL+AVVIITGCFSYYQEAKSSKIMESFKNMVPQ +
Sbjct: 170 LCFLAYGIQAGTEDDPSGDNLYLGIVLAAVVIITGCFSYYQEAKSSKIMESFKNMVPQVR 229
Query: 179 ALVIRNGEKMSINAEEVVVGDLVEVKGGDRIPADLRIISANGCKVDNSSLTGESEPQTRS 358
ALVIR GEKM +NAEEVVVGD VE+KGGDR+PADLRIISA+G +VDNSSLTGESEPQTRS
Sbjct: 230 ALVIREGEKMQVNAEEVVVGDXVEIKGGDRVPADLRIISAHGXQVDNSSLTGESEPQTRS 289
Query: 359 PDFTNENPLETRNIAFFSTNCVEGTARGIVVYTGDRTVMGRIATLASGLEGGQTPXXXXX 538
PD T++NPLETRNI FFSTNCVEGTARG+VV TGDRTVMGRIATLASGLE G+TP
Sbjct: 290 PDCTHDNPLETRNITFFSTNCVEGTARGVVVATGDRTVMGRIATLASGLEVGKTPIAIEI 349
Query: 539 XXXXXXXTGVAVFLGVSFFILSLILEYTWLEAVIFLIGIIVANVPEGXXXXXXXXXXXXX 718
TGVAVFLGVSFFILSLIL YTWLEAVIFLIGIIVANVPEG
Sbjct: 350 EHFIQLITGVAVFLGVSFFILSLILGYTWLEAVIFLIGIIVANVPEGLLATVTVCLTLTA 409
Query: 719 KRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSG 898
KRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTE+QSG
Sbjct: 410 KRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSG 469
Query: 899 VSFDKTSATWLALSRIAGLCNRAVFQANQENLPILKRAVAGDASESALLKCIELCCGSVK 1078
SFDK+S TW+ALS IAGLCNRAVF+ Q+N+P+LKR VAGDASESALLKCIEL GSVK
Sbjct: 470 TSFDKSSHTWVALSHIAGLCNRAVFKGGQDNVPVLKRDVAGDASESALLKCIELSSGSVK 529
Query: 1079 EMRERYTKIVEIPFNSTNKYQLSIHKNPNTAEPRHLLVMKGAPEKDPGRCSSILIHGKGQ 1258
MRER K+ EIPFNSTNKYQLSIH+ + + R+LLVMKGAPE+ RCS+IL+HGK Q
Sbjct: 530 LMRERNKKVAEIPFNSTNKYQLSIHETEDPNDNRYLLVMKGAPERILDRCSTILLHGKEQ 589
Query: 1259 PLDEELKDAFQNAYLELGGPGKRVLGFCHFFLPDKQVPRSFQFDTDHVKFPLENLCLRGL 1438
PLDEE+K+AFQNAYLELGG G+RVLGFCH++LP++Q P+ F FD D V F +NLC GL
Sbjct: 590 PLDEEMKEAFQNAYLELGGLGERVLGFCHYYLPEEQFPKGFAFDCDDVNFTTDNLCFVGL 649
Query: 1439 ISMNDPPRAXVPDAV 1483
+SM DPPRA VPDAV
Sbjct: 650 MSMIDPPRAAVPDAV 664
>ref|NP_001074993.1| sodium/potassium-transporting ATPase subunit alpha-2 precursor [Bos
taurus].
Length = 1020
Score = 756 bits (1953), Expect = 0.0
Identities = 382/494 (77%), Positives = 421/494 (85%)
Frame = +2
Query: 2 LCFLAYGIQAATEEEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQA 181
LCFLA+GIQAA E+EP NDNLYLGVVL+AVVI+TGCFSYYQEAKSSKIM+SFKNMVPQQA
Sbjct: 108 LCFLAFGIQAAMEDEPSNDNLYLGVVLAAVVIVTGCFSYYQEAKSSKIMDSFKNMVPQQA 167
Query: 182 LVIRNGEKMSINAEEVVVGDLVEVKGGDRIPADLRIISANGCKVDNSSLTGESEPQTRSP 361
LV+R GEKM INAEEVVVGDLVEVKGGDR+PADLRIIS++GCKVDNSSLTGESEPQTRSP
Sbjct: 168 LVVREGEKMQINAEEVVVGDLVEVKGGDRVPADLRIISSHGCKVDNSSLTGESEPQTRSP 227
Query: 362 DFTNENPLETRNIAFFSTNCVEGTARGIVVYTGDRTVMGRIATLASGLEGGQTPXXXXXX 541
+FT+ENPLETRNI FFSTNCVEGTARGIV+ TGDRTVMGRIATLASGLE G+TP
Sbjct: 228 EFTHENPLETRNICFFSTNCVEGTARGIVIATGDRTVMGRIATLASGLEVGRTPIAMEIE 287
Query: 542 XXXXXXTGVAVFLGVSFFILSLILEYTWLEAVIFLIGIIVANVPEGXXXXXXXXXXXXXK 721
TGVAVFLGVSFF+LSLIL Y+WLEAVIFLIGIIVANVPEG K
Sbjct: 288 HFIQLITGVAVFLGVSFFVLSLILGYSWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAK 347
Query: 722 RMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGV 901
RMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTE+QSG
Sbjct: 348 RMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSGA 407
Query: 902 SFDKTSATWLALSRIAGLCNRAVFQANQENLPILKRAVAGDASESALLKCIELCCGSVKE 1081
+FDK S TW ALSRIAGLCNRAVF+A QEN+ + KR AGDASESALLKCIEL CGSV++
Sbjct: 408 TFDKRSPTWTALSRIAGLCNRAVFKAGQENISVSKRDTAGDASESALLKCIELSCGSVRK 467
Query: 1082 MRERYTKIVEIPFNSTNKYQLSIHKNPNTAEPRHLLVMKGAPEKDPGRCSSILIHGKGQP 1261
MR+R K+ EIPFNSTNKYQLSIH+ ++ + H+LVMKGAPE+ RCSSIL+ GK P
Sbjct: 468 MRDRNPKVAEIPFNSTNKYQLSIHEREDSPQ-SHVLVMKGAPERILDRCSSILVQGKEIP 526
Query: 1262 LDEELKDAFQNAYLELGGPGKRVLGFCHFFLPDKQVPRSFQFDTDHVKFPLENLCLRGLI 1441
LD+E++DAFQNAYLELGG G+RVLGFC LP + PR F+FDTD + FP E LC GL+
Sbjct: 527 LDKEMQDAFQNAYLELGGLGERVLGFCQLNLPSAKFPRGFKFDTDELNFPTEKLCFVGLM 586
Query: 1442 SMNDPPRAXVPDAV 1483
SM DPPRA VPDAV
Sbjct: 587 SMIDPPRAAVPDAV 600
>ref|NP_001137575.1| sodium/potassium-transporting ATPase subunit alpha-4 [Bos taurus].
Length = 1030
Score = 668 bits (1724), Expect = 0.0
Identities = 345/494 (69%), Positives = 393/494 (79%)
Frame = +2
Query: 2 LCFLAYGIQAATEEEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQA 181
LCF+A+GIQ E+ DNLYLG+VL+ VVIITGCFSYYQEAKSSKIMESFKNMVPQQA
Sbjct: 119 LCFVAFGIQLYFNEDTTKDNLYLGIVLTVVVIITGCFSYYQEAKSSKIMESFKNMVPQQA 178
Query: 182 LVIRNGEKMSINAEEVVVGDLVEVKGGDRIPADLRIISANGCKVDNSSLTGESEPQTRSP 361
LVIR GEK I EVVVGDLVEVKGGDRIPAD+R+IS+ GCKVDNSSLTGESEPQ+RS
Sbjct: 179 LVIRGGEKFQIPVYEVVVGDLVEVKGGDRIPADIRLISSQGCKVDNSSLTGESEPQSRST 238
Query: 362 DFTNENPLETRNIAFFSTNCVEGTARGIVVYTGDRTVMGRIATLASGLEGGQTPXXXXXX 541
+FTNENPLET+NI FFSTNCVEG+A+GIV+ TGD TVMGRIA+L SGL G+TP
Sbjct: 239 EFTNENPLETQNICFFSTNCVEGSAQGIVIATGDSTVMGRIASLTSGLAVGKTPIAIELE 298
Query: 542 XXXXXXTGVAVFLGVSFFILSLILEYTWLEAVIFLIGIIVANVPEGXXXXXXXXXXXXXK 721
TGVAVFLGV+FF LSLIL YTWLEAVIFLIGIIVANVPEG K
Sbjct: 299 HFIHLITGVAVFLGVTFFGLSLILGYTWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAK 358
Query: 722 RMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGV 901
RMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAH+WFD I+EADTTE Q+G
Sbjct: 359 RMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHLWFDKTIYEADTTEEQTGN 418
Query: 902 SFDKTSATWLALSRIAGLCNRAVFQANQENLPILKRAVAGDASESALLKCIELCCGSVKE 1081
F K S TW L+RIAGLCNRA F+AN+E+LPI KRA GDASESALLK IE SV E
Sbjct: 419 PFAKGSDTWFILARIAGLCNRADFKANEESLPIAKRATTGDASESALLKFIEQSYSSVNE 478
Query: 1082 MRERYTKIVEIPFNSTNKYQLSIHKNPNTAEPRHLLVMKGAPEKDPGRCSSILIHGKGQP 1261
MRE+ K+ EIPFNSTNKYQ+SIH ++++ H+L+MKGAPE+ CS+ L+ G+ P
Sbjct: 479 MREKSPKVAEIPFNSTNKYQVSIHLREDSSQ-AHVLMMKGAPERILEFCSTYLLKGQEYP 537
Query: 1262 LDEELKDAFQNAYLELGGPGKRVLGFCHFFLPDKQVPRSFQFDTDHVKFPLENLCLRGLI 1441
+D+E+KDAFQNAYL+LGG G+RVLG C LP+ P+ F+F+TD + FP+ NLC GLI
Sbjct: 538 IDDEMKDAFQNAYLDLGGLGERVLGVCFLNLPN-TYPKGFKFNTDEINFPINNLCFVGLI 596
Query: 1442 SMNDPPRAXVPDAV 1483
SM DPPRA VPDAV
Sbjct: 597 SMIDPPRAAVPDAV 610
>ref|NP_001137561.1| potassium-transporting ATPase alpha chain 1 [Bos taurus].
Length = 1034
Score = 612 bits (1577), Expect = e-175
Identities = 298/494 (60%), Positives = 376/494 (76%)
Frame = +2
Query: 2 LCFLAYGIQAATEEEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQA 181
+C +A+ IQA+ + +DNLYL + L AVV++TGCF YYQE KS+ I+ SFKN+VPQQA
Sbjct: 120 ICLIAFAIQASEGDLTTDDNLYLALALIAVVVVTGCFGYYQEFKSTNIIASFKNLVPQQA 179
Query: 182 LVIRNGEKMSINAEEVVVGDLVEVKGGDRIPADLRIISANGCKVDNSSLTGESEPQTRSP 361
VIR+G+K INA+++VVGDLVE+KGGDR+PAD+RI+ A GCKVDNSSLTGESEPQTRSP
Sbjct: 180 TVIRDGDKFQINADQLVVGDLVEMKGGDRVPADIRILQAQGCKVDNSSLTGESEPQTRSP 239
Query: 362 DFTNENPLETRNIAFFSTNCVEGTARGIVVYTGDRTVMGRIATLASGLEGGQTPXXXXXX 541
+ T+E+PLETRNIAFFST C+EGTA+G+VV TGDRT++GRIA+LASG+E +TP
Sbjct: 240 ECTHESPLETRNIAFFSTMCLEGTAQGLVVNTGDRTIIGRIASLASGVENEKTPIAIEIE 299
Query: 542 XXXXXXTGVAVFLGVSFFILSLILEYTWLEAVIFLIGIIVANVPEGXXXXXXXXXXXXXK 721
G+A+ G +FFI+++ + YT+L A++F + I+VA VPEG K
Sbjct: 300 HFVDIIAGLAILFGATFFIVAMCIGYTFLRAMVFFMAIVVAYVPEGLLATVTVCLSLTAK 359
Query: 722 RMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGV 901
R+A KNC+VKNLEAVETLGSTS ICSDKTGTLTQNRMTV+H+WFDN IH ADTTE+QSG
Sbjct: 360 RLASKNCVVKNLEAVETLGSTSVICSDKTGTLTQNRMTVSHLWFDNHIHSADTTEDQSGQ 419
Query: 902 SFDKTSATWLALSRIAGLCNRAVFQANQENLPILKRAVAGDASESALLKCIELCCGSVKE 1081
+FD++S TW AL R+ LCNRA F++ Q+ +P+ KR V GDASE+ALLK EL G+
Sbjct: 420 TFDQSSETWRALCRVLTLCNRAAFKSGQDAVPVPKRIVIGDASETALLKFSELTLGNAMG 479
Query: 1082 MRERYTKIVEIPFNSTNKYQLSIHKNPNTAEPRHLLVMKGAPEKDPGRCSSILIHGKGQP 1261
RER+ K+ EIPFNSTNK+QLSIH + +PRH+LVMKGAPE+ RCSSILI G+ P
Sbjct: 480 YRERFPKVCEIPFNSTNKFQLSIHTLEDPRDPRHVLVMKGAPERVLERCSSILIKGQELP 539
Query: 1262 LDEELKDAFQNAYLELGGPGKRVLGFCHFFLPDKQVPRSFQFDTDHVKFPLENLCLRGLI 1441
LDE+ ++AFQ AYL LGG G+RVLGFC +L +K P + FD + + FP LC GL+
Sbjct: 540 LDEQWREAFQTAYLSLGGLGERVLGFCQLYLSEKDYPHGYAFDVEAMNFPTSGLCFAGLV 599
Query: 1442 SMNDPPRAXVPDAV 1483
SM DPPRA VPDAV
Sbjct: 600 SMIDPPRATVPDAV 613
>ref|XP_002691916.1| PREDICTED: non-gastric H+,K+-ATPase-like [Bos taurus].
Length = 1107
Score = 607 bits (1566), Expect = e-174
Identities = 298/494 (60%), Positives = 383/494 (77%)
Frame = +2
Query: 2 LCFLAYGIQAATEEEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQA 181
LC++AYGIQ + + DN+YLG VL+ VVI+TG F+YYQEAKS+ IM SF+ M+PQQA
Sbjct: 193 LCWIAYGIQYSNDHASSLDNVYLGSVLALVVILTGVFAYYQEAKSTNIMSSFRKMIPQQA 252
Query: 182 LVIRNGEKMSINAEEVVVGDLVEVKGGDRIPADLRIISANGCKVDNSSLTGESEPQTRSP 361
LVIR+ EK +I A+++VVGD+VE+KGGDR+PAD+RI+S GCKVDNSS+TGESEPQ RS
Sbjct: 253 LVIRDSEKKTIPADQLVVGDIVEIKGGDRVPADVRILSTQGCKVDNSSVTGESEPQARSC 312
Query: 362 DFTNENPLETRNIAFFSTNCVEGTARGIVVYTGDRTVMGRIATLASGLEGGQTPXXXXXX 541
+FT+E+PLET+NIAFFST C+EGTA G+V+ TGDRT++G+IA+LASG++ +TP
Sbjct: 313 EFTHESPLETKNIAFFSTTCLEGTATGMVINTGDRTIIGQIASLASGVKDLKTPIAIEIE 372
Query: 542 XXXXXXTGVAVFLGVSFFILSLILEYTWLEAVIFLIGIIVANVPEGXXXXXXXXXXXXXK 721
GVAV +GV FFI+++ ++Y L+++IFLIGIIVANVPEG K
Sbjct: 373 HFVHIVAGVAVSIGVIFFIIAVSMKYYVLDSIIFLIGIIVANVPEGLLATVTVTLSLTAK 432
Query: 722 RMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGV 901
RMA+KNCLVKNLEAVETLGSTS ICSDKTGTLTQNRMTVAH+WFD+QI ADT+ENQS
Sbjct: 433 RMAKKNCLVKNLEAVETLGSTSIICSDKTGTLTQNRMTVAHLWFDHQIFVADTSENQSNQ 492
Query: 902 SFDKTSATWLALSRIAGLCNRAVFQANQENLPILKRAVAGDASESALLKCIELCCGSVKE 1081
FD++SATW +LSRI LCNRA F+ QE++PI+K+ V GDASE+ALLK E+ G+V +
Sbjct: 493 VFDQSSATWASLSRIITLCNRAEFRPGQESVPIMKKIVVGDASETALLKFSEVMLGNVMD 552
Query: 1082 MRERYTKIVEIPFNSTNKYQLSIHKNPNTAEPRHLLVMKGAPEKDPGRCSSILIHGKGQP 1261
+R+R K+ EIPFNSTNK+QLSIH+ + + R L+VMKGAPE+ +CS+I+++G+ QP
Sbjct: 553 IRKRNRKVAEIPFNSTNKFQLSIHETEDPDDKRFLVVMKGAPERVLEKCSTIMVNGQEQP 612
Query: 1262 LDEELKDAFQNAYLELGGPGKRVLGFCHFFLPDKQVPRSFQFDTDHVKFPLENLCLRGLI 1441
LD +AF AY+ELGG G+RVLGFCH +LP + P ++ FD D V FP N C GL+
Sbjct: 613 LDRSTAEAFHTAYMELGGIGERVLGFCHLYLPTDEFPETYSFDVDAVNFPTSNFCFVGLL 672
Query: 1442 SMNDPPRAXVPDAV 1483
SM DPPR+ VPDAV
Sbjct: 673 SMIDPPRSTVPDAV 686
>ref|XP_609180.4| PREDICTED: hydrogen/potassium-exchanging ATPase 12A [Bos taurus].
Length = 1058
Score = 607 bits (1566), Expect = e-174
Identities = 298/494 (60%), Positives = 383/494 (77%)
Frame = +2
Query: 2 LCFLAYGIQAATEEEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQA 181
LC++AYGIQ + + DN+YLG VL+ VVI+TG F+YYQEAKS+ IM SF+ M+PQQA
Sbjct: 144 LCWIAYGIQYSNDHASSLDNVYLGSVLALVVILTGVFAYYQEAKSTNIMSSFRKMIPQQA 203
Query: 182 LVIRNGEKMSINAEEVVVGDLVEVKGGDRIPADLRIISANGCKVDNSSLTGESEPQTRSP 361
LVIR+ EK +I A+++VVGD+VE+KGGDR+PAD+RI+S GCKVDNSS+TGESEPQ RS
Sbjct: 204 LVIRDSEKKTIPADQLVVGDIVEIKGGDRVPADVRILSTQGCKVDNSSVTGESEPQARSC 263
Query: 362 DFTNENPLETRNIAFFSTNCVEGTARGIVVYTGDRTVMGRIATLASGLEGGQTPXXXXXX 541
+FT+E+PLET+NIAFFST C+EGTA G+V+ TGDRT++G+IA+LASG++ +TP
Sbjct: 264 EFTHESPLETKNIAFFSTTCLEGTATGMVINTGDRTIIGQIASLASGVKDLKTPIAIEIE 323
Query: 542 XXXXXXTGVAVFLGVSFFILSLILEYTWLEAVIFLIGIIVANVPEGXXXXXXXXXXXXXK 721
GVAV +GV FFI+++ ++Y L+++IFLIGIIVANVPEG K
Sbjct: 324 HFVHIVAGVAVSIGVIFFIIAVSMKYYVLDSIIFLIGIIVANVPEGLLATVTVTLSLTAK 383
Query: 722 RMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGV 901
RMA+KNCLVKNLEAVETLGSTS ICSDKTGTLTQNRMTVAH+WFD+QI ADT+ENQS
Sbjct: 384 RMAKKNCLVKNLEAVETLGSTSIICSDKTGTLTQNRMTVAHLWFDHQIFVADTSENQSNQ 443
Query: 902 SFDKTSATWLALSRIAGLCNRAVFQANQENLPILKRAVAGDASESALLKCIELCCGSVKE 1081
FD++SATW +LSRI LCNRA F+ QE++PI+K+ V GDASE+ALLK E+ G+V +
Sbjct: 444 VFDQSSATWASLSRIITLCNRAEFRPGQESVPIMKKIVVGDASETALLKFSEVMLGNVMD 503
Query: 1082 MRERYTKIVEIPFNSTNKYQLSIHKNPNTAEPRHLLVMKGAPEKDPGRCSSILIHGKGQP 1261
+R+R K+ EIPFNSTNK+QLSIH+ + + R L+VMKGAPE+ +CS+I+++G+ QP
Sbjct: 504 IRKRNRKVAEIPFNSTNKFQLSIHETEDPDDKRFLVVMKGAPERVLEKCSTIMVNGQEQP 563
Query: 1262 LDEELKDAFQNAYLELGGPGKRVLGFCHFFLPDKQVPRSFQFDTDHVKFPLENLCLRGLI 1441
LD +AF AY+ELGG G+RVLGFCH +LP + P ++ FD D V FP N C GL+
Sbjct: 564 LDRSTAEAFHTAYMELGGIGERVLGFCHLYLPTDEFPETYSFDVDAVNFPTSNFCFVGLL 623
Query: 1442 SMNDPPRAXVPDAV 1483
SM DPPR+ VPDAV
Sbjct: 624 SMIDPPRSTVPDAV 637
>ref|XP_002695065.1| PREDICTED: ATPase, H+/K+ exchanging, alpha polypeptide-like [Bos
taurus].
Length = 296
Score = 287 bits (734), Expect = 2e-77
Identities = 136/226 (60%), Positives = 180/226 (79%)
Frame = +2
Query: 2 LCFLAYGIQAATEEEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQA 181
+C +A+ IQA+ + +DNLYL + L AVV++TGCF YYQE KS+ I+ SFKN+VPQQA
Sbjct: 55 ICLIAFAIQASEGDLTTDDNLYLALALIAVVVVTGCFGYYQEFKSTNIIASFKNLVPQQA 114
Query: 182 LVIRNGEKMSINAEEVVVGDLVEVKGGDRIPADLRIISANGCKVDNSSLTGESEPQTRSP 361
VIR+G+K INA+++VVGDLVE+KGGDR+PAD+RI+ A GCKVDNSSLTGESEPQTRSP
Sbjct: 115 TVIRDGDKFQINADQLVVGDLVEMKGGDRVPADIRILQAQGCKVDNSSLTGESEPQTRSP 174
Query: 362 DFTNENPLETRNIAFFSTNCVEGTARGIVVYTGDRTVMGRIATLASGLEGGQTPXXXXXX 541
+ T+E+PLETRNIAFFST C+EGTA+G+VV TGDRT++GRIA+LASG+E +TP
Sbjct: 175 ECTHESPLETRNIAFFSTMCLEGTAQGLVVNTGDRTIIGRIASLASGVENEKTPIAIEIE 234
Query: 542 XXXXXXTGVAVFLGVSFFILSLILEYTWLEAVIFLIGIIVANVPEG 679
G+A+ G +FFI+++ + YT+L A++F + I+VA VPEG
Sbjct: 235 HFVDIIAGLAILFGATFFIVAMCIGYTFLRAMVFFMAIVVAYVPEG 280
>ref|XP_002694791.1| PREDICTED: calcium-transporting ATPase type 2C member 2-like [Bos
taurus].
Length = 1102
Score = 177 bits (450), Expect = 2e-44
Identities = 150/486 (30%), Positives = 224/486 (46%), Gaps = 16/486 (3%)
Frame = +2
Query: 74 VVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQALVIRNGEKMSINAEEVVVGDLVEV 253
+ ++ V+I ++ QE +S K +E +VP + IR G+ + A ++V GD+V +
Sbjct: 291 ISIAVAVLIVVTVAFIQEYRSEKSLEELTKLVPPECNCIREGKLQHLLARDLVPGDIVSL 350
Query: 254 KGGDRIPADLRIISANGCKVDNSSLTGESEPQTRS-PDFTNENPLET-RNIAFFSTNCVE 427
GDR+PAD+R+ VD SS TGE+EP +++ T E L T NI F T
Sbjct: 351 SIGDRVPADIRLTEVTDLLVDESSFTGEAEPSSKTDTPLTGEGDLTTLSNIVFMGTLVQC 410
Query: 428 GTARGIVVYTGDRTVMGRIATLASGLEGGQTPXXXXXXXXXXXXTGVAVFLGVSFFILSL 607
G +G+V+ TG+++ G + + E +TP T +F SF I+ L
Sbjct: 411 GKGQGVVIGTGEKSQFGEVFKMMQAEETPKTPLQKSMDKLGKQLT---LF---SFGIIGL 464
Query: 608 ILEYTWLEA----VIFLIGI--IVANVPEGXXXXXXXXXXXXXKRMARKNCLVKNLEAVE 769
I+ WL+ +F IG+ VA +PEG RMARK +VK L VE
Sbjct: 465 IMFTGWLQGKHLLSMFTIGVSLAVAAIPEGLPIVVTVTLVLGVLRMARKRVIVKKLPIVE 524
Query: 770 TLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGVSFDKTSATWLALSR-- 943
TLG + ICSDKTGTLT N MTV + + +H SGV ++ L S+
Sbjct: 525 TLGCCNVICSDKTGTLTANEMTVTQLVTSDGLH-----AEVSGVGYNGNGTVCLLPSKEV 579
Query: 944 IAGLCNRAVFQANQ-----ENLPILKRAVAGDASESALLK-CIELCCGSVKEMRERYTKI 1105
I N +V + + N I K V G +E AL+ +++ G +K + Y +
Sbjct: 580 IKQFSNVSVGKLVEAGCVANNAIIRKNTVMGQPTEGALVALAMKMDLGDIK---DSYIRK 636
Query: 1106 VEIPFNSTNKYQLSIHKNPNTAEPRHLLVMKGAPEKDPGRCSSILIHGKGQPLDEELKDA 1285
EIPF+S K+ +++ + E + MKGA E+ C+ G PL + +
Sbjct: 637 KEIPFSSEQKW-MAVQCSSKNEEREDMYFMKGAFEEVIRYCAMYNHGGIPLPLTPQQRAF 695
Query: 1286 FQNAYLELGGPGKRVLGFCHFFLPDKQVPRSFQFDTDHVKFPLENLCLRGLISMNDPPRA 1465
Q ++G G RVL P+ L L GLI + DPPRA
Sbjct: 696 CQQEEKKMGSLGLRVLALASG--PE-----------------LGKLTFLGLIGIIDPPRA 736
Query: 1466 XVPDAV 1483
V +AV
Sbjct: 737 GVKEAV 742
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 58,480,086
Number of extensions: 1669240
Number of successful extensions: 6247
Number of sequences better than 1.0e-05: 33
Number of HSP's gapped: 6196
Number of HSP's successfully gapped: 45
Length of query: 494
Length of database: 17,681,374
Length adjustment: 106
Effective length of query: 388
Effective length of database: 14,174,046
Effective search space: 5499529848
Effective search space used: 5499529848
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-001369
(1484 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001003306.1| sodium/potassium-transporting ATPase subunit... 863 0.0
Alignment gi|XP_855286.1| PREDICTED: similar to Na+/K+ -ATPase alpha 3 su... 769 0.0
Alignment gi|XP_545753.2| PREDICTED: similar to Sodium/potassium-transpor... 756 0.0
Alignment gi|XP_860689.1| PREDICTED: similar to Sodium/potassium-transpor... 756 0.0
Alignment gi|XP_545754.2| PREDICTED: similar to Sodium/potassium-transpor... 678 0.0
Alignment gi|XP_848278.1| PREDICTED: similar to Potassium-transporting AT... 600 e-172
Alignment gi|NP_001003342.1| potassium-transporting ATPase alpha chain 1 ... 600 e-171
Alignment gi|XP_536762.2| PREDICTED: similar to Probable calcium-transpor... 177 2e-44
Alignment gi|XP_851493.1| PREDICTED: similar to calcium-transporting ATPa... 174 2e-43
Alignment gi|XP_863766.1| PREDICTED: similar to calcium-transporting ATPa... 174 2e-43
>ref|NP_001003306.1| sodium/potassium-transporting ATPase subunit alpha-1 precursor [Canis
lupus familiaris].
Length = 1021
Score = 863 bits (2231), Expect = 0.0
Identities = 439/494 (88%), Positives = 449/494 (90%)
Frame = +2
Query: 2 LCFLAYGIQAATEEEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQA 181
LCFLAYGIQAATEEEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQA
Sbjct: 108 LCFLAYGIQAATEEEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQA 167
Query: 182 LVIRNGEKMSINAEEVVVGDLVEVKGGDRIPADLRIISANGCKVDNSSLTGESEPQTRSP 361
LVIRNGEKMSINAEEVV+GDLVEVKGGDRIPADLRIISANGCKVDNSSLTGESEPQTRSP
Sbjct: 168 LVIRNGEKMSINAEEVVIGDLVEVKGGDRIPADLRIISANGCKVDNSSLTGESEPQTRSP 227
Query: 362 DFTNENPLETRNIAFFSTNCVEGTARGIVVYTGDRTVMGRIATLASGLEGGQTPXXXXXX 541
DFTNENPLETRNIAFFSTNCV+GTARGIVVYTGDRTVMGRIATLASGLEGGQTP
Sbjct: 228 DFTNENPLETRNIAFFSTNCVKGTARGIVVYTGDRTVMGRIATLASGLEGGQTPIAAEIE 287
Query: 542 XXXXXXTGVAVFLGVSFFILSLILEYTWLEAVIFLIGIIVANVPEGXXXXXXXXXXXXXK 721
TGVAVFLGVSFFILSLILEYTWLEAVIFLIGIIVANVPEG K
Sbjct: 288 HFIHIITGVAVFLGVSFFILSLILEYTWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAK 347
Query: 722 RMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGV 901
RMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGV
Sbjct: 348 RMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGV 407
Query: 902 SFDKTSATWLALSRIAGLCNRAVFQANQENLPILKRAVAGDASESALLKCIELCCGSVKE 1081
SFDK+SATWLALSRIAGLCNRAVFQANQENLPILKRAVAGDASESALLKCIELCCGSVKE
Sbjct: 408 SFDKSSATWLALSRIAGLCNRAVFQANQENLPILKRAVAGDASESALLKCIELCCGSVKE 467
Query: 1082 MRERYTKIVEIPFNSTNKYQLSIHKNPNTAEPRHLLVMKGAPEKDPGRCSSILIHGKGQP 1261
MR+RY KIVEIPFNSTNKYQLSIHKNPNT+EPRHLLVMKGAPE+ RCSSIL+HGK QP
Sbjct: 468 MRDRYAKIVEIPFNSTNKYQLSIHKNPNTSEPRHLLVMKGAPERILDRCSSILLHGKEQP 527
Query: 1262 LDEELKDAFQNAYLELGGPGKRVLGFCHFFLPDKQVPRSFQFDTDHVKFPLENLCLRGLI 1441
LDEELKDA QNAYLELGG G+RVLGF H FLPD+Q P FQFDTD V FP+ENLC G I
Sbjct: 528 LDEELKDALQNAYLELGGLGERVLGFRHLFLPDEQFPEGFQFDTDDVNFPVENLCFVGFI 587
Query: 1442 SMNDPPRAXVPDAV 1483
SM PPRA VPDAV
Sbjct: 588 SMIGPPRAAVPDAV 601
>ref|XP_855286.1| PREDICTED: similar to Na+/K+ -ATPase alpha 3 subunit [Canis
familiaris].
Length = 1012
Score = 769 bits (1986), Expect = 0.0
Identities = 387/494 (78%), Positives = 424/494 (85%)
Frame = +2
Query: 2 LCFLAYGIQAATEEEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQA 181
LCFLAYGIQA TE++P DNLYLG+VL+AVVIITGCFSYYQEAKSSKIMESFKNMVPQQA
Sbjct: 157 LCFLAYGIQAGTEDDPSGDNLYLGIVLAAVVIITGCFSYYQEAKSSKIMESFKNMVPQQA 216
Query: 182 LVIRNGEKMSINAEEVVVGDLVEVKGGDRIPADLRIISANGCKVDNSSLTGESEPQTRSP 361
LVIR GEKM +NAEEVVVGDLVE+KGGDR+PADLRIISA+GCKVDNSSLTGESEPQTRSP
Sbjct: 217 LVIREGEKMQVNAEEVVVGDLVEIKGGDRVPADLRIISAHGCKVDNSSLTGESEPQTRSP 276
Query: 362 DFTNENPLETRNIAFFSTNCVEGTARGIVVYTGDRTVMGRIATLASGLEGGQTPXXXXXX 541
D T++NPLETRNI FFSTNCVEGTARG+VV TGDRTVMGRIATLASGLE G+TP
Sbjct: 277 DCTHDNPLETRNITFFSTNCVEGTARGVVVATGDRTVMGRIATLASGLEVGKTPIAIEIE 336
Query: 542 XXXXXXTGVAVFLGVSFFILSLILEYTWLEAVIFLIGIIVANVPEGXXXXXXXXXXXXXK 721
TGVAVFLGVSFFILSLIL YTWLEAVIFLIGIIVANVPEG K
Sbjct: 337 HFIQLITGVAVFLGVSFFILSLILGYTWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAK 396
Query: 722 RMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGV 901
RMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTE+QSG
Sbjct: 397 RMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSGT 456
Query: 902 SFDKTSATWLALSRIAGLCNRAVFQANQENLPILKRAVAGDASESALLKCIELCCGSVKE 1081
SFDK+S TW+ALS IAGLCNRAVF+ Q+N+P+LKR VAGDASESALLKCIEL GSVK
Sbjct: 457 SFDKSSHTWVALSHIAGLCNRAVFKGGQDNIPVLKRDVAGDASESALLKCIELSSGSVKL 516
Query: 1082 MRERYTKIVEIPFNSTNKYQLSIHKNPNTAEPRHLLVMKGAPEKDPGRCSSILIHGKGQP 1261
MRER K+ EIPFNSTNKYQLSIH+ + + R+LLVMKGAPE+ RCS+IL+ GK QP
Sbjct: 517 MRERNKKVAEIPFNSTNKYQLSIHETEDPNDNRYLLVMKGAPERILDRCSTILLQGKEQP 576
Query: 1262 LDEELKDAFQNAYLELGGPGKRVLGFCHFFLPDKQVPRSFQFDTDHVKFPLENLCLRGLI 1441
LDEE+K+AFQNAYLELGG G+RVLGFCH++LP++Q P+ F FD D V F +NLC GL+
Sbjct: 577 LDEEMKEAFQNAYLELGGLGERVLGFCHYYLPEEQFPKGFAFDCDDVNFTTDNLCFVGLM 636
Query: 1442 SMNDPPRAXVPDAV 1483
SM DPPRA VPDAV
Sbjct: 637 SMIDPPRAAVPDAV 650
>ref|XP_545753.2| PREDICTED: similar to Sodium/potassium-transporting ATPase alpha-2
chain precursor (Sodium pump 2) (Na+/K+ ATPase 2) isoform
1 [Canis familiaris].
Length = 981
Score = 756 bits (1951), Expect = 0.0
Identities = 381/494 (77%), Positives = 421/494 (85%)
Frame = +2
Query: 2 LCFLAYGIQAATEEEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQA 181
LCFLAYGIQAA E+EP NDNLYLGVVL+AVVI+TGCFSYYQEAKSSKIM+SFKNMVPQQA
Sbjct: 108 LCFLAYGIQAAMEDEPSNDNLYLGVVLAAVVIVTGCFSYYQEAKSSKIMDSFKNMVPQQA 167
Query: 182 LVIRNGEKMSINAEEVVVGDLVEVKGGDRIPADLRIISANGCKVDNSSLTGESEPQTRSP 361
LV+R GEKM INAEEVVVGDLVEVKGGDR+PADLRIIS++GCKVDNSSLTGESEPQTRSP
Sbjct: 168 LVVREGEKMQINAEEVVVGDLVEVKGGDRVPADLRIISSHGCKVDNSSLTGESEPQTRSP 227
Query: 362 DFTNENPLETRNIAFFSTNCVEGTARGIVVYTGDRTVMGRIATLASGLEGGQTPXXXXXX 541
+FT+ENPLETRNI FFSTNCVEGTARGIV+ TGDRTVMGRIATLASGLE G+TP
Sbjct: 228 EFTHENPLETRNICFFSTNCVEGTARGIVIATGDRTVMGRIATLASGLEVGRTPIAMEIE 287
Query: 542 XXXXXXTGVAVFLGVSFFILSLILEYTWLEAVIFLIGIIVANVPEGXXXXXXXXXXXXXK 721
TGVAVFLGVSFF+LSLIL Y+WLEAVIFLIGIIVANVPEG K
Sbjct: 288 HFIQLITGVAVFLGVSFFVLSLILGYSWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAK 347
Query: 722 RMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGV 901
RMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTE+QSG
Sbjct: 348 RMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSGA 407
Query: 902 SFDKTSATWLALSRIAGLCNRAVFQANQENLPILKRAVAGDASESALLKCIELCCGSVKE 1081
+FDK S TW ALSRIAGLCNRAVF+A QEN+ + KR AGDASESALLKCIEL CGSV++
Sbjct: 408 TFDKRSPTWTALSRIAGLCNRAVFKAGQENISVSKRDTAGDASESALLKCIELSCGSVRK 467
Query: 1082 MRERYTKIVEIPFNSTNKYQLSIHKNPNTAEPRHLLVMKGAPEKDPGRCSSILIHGKGQP 1261
MR+R K+ EIPFNSTNKYQLSIH+ ++ + H+LVMKGAPE+ RCS+IL+ GK P
Sbjct: 468 MRDRNPKVAEIPFNSTNKYQLSIHEREDSPQ-SHVLVMKGAPERILDRCSTILVQGKEIP 526
Query: 1262 LDEELKDAFQNAYLELGGPGKRVLGFCHFFLPDKQVPRSFQFDTDHVKFPLENLCLRGLI 1441
LD+E++DAFQNAY+ELGG G+RVLGFC LP + PR F+FDTD + FP E LC GL+
Sbjct: 527 LDKEMQDAFQNAYMELGGLGERVLGFCQLNLPSGKFPRGFRFDTDELNFPTEKLCFVGLM 586
Query: 1442 SMNDPPRAXVPDAV 1483
SM DPPRA VPDAV
Sbjct: 587 SMIDPPRAAVPDAV 600
>ref|XP_860689.1| PREDICTED: similar to Sodium/potassium-transporting ATPase alpha-2
chain precursor (Sodium pump 2) (Na+/K+ ATPase 2) isoform
2 [Canis familiaris].
Length = 953
Score = 756 bits (1951), Expect = 0.0
Identities = 381/494 (77%), Positives = 421/494 (85%)
Frame = +2
Query: 2 LCFLAYGIQAATEEEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQA 181
LCFLAYGIQAA E+EP NDNLYLGVVL+AVVI+TGCFSYYQEAKSSKIM+SFKNMVPQQA
Sbjct: 108 LCFLAYGIQAAMEDEPSNDNLYLGVVLAAVVIVTGCFSYYQEAKSSKIMDSFKNMVPQQA 167
Query: 182 LVIRNGEKMSINAEEVVVGDLVEVKGGDRIPADLRIISANGCKVDNSSLTGESEPQTRSP 361
LV+R GEKM INAEEVVVGDLVEVKGGDR+PADLRIIS++GCKVDNSSLTGESEPQTRSP
Sbjct: 168 LVVREGEKMQINAEEVVVGDLVEVKGGDRVPADLRIISSHGCKVDNSSLTGESEPQTRSP 227
Query: 362 DFTNENPLETRNIAFFSTNCVEGTARGIVVYTGDRTVMGRIATLASGLEGGQTPXXXXXX 541
+FT+ENPLETRNI FFSTNCVEGTARGIV+ TGDRTVMGRIATLASGLE G+TP
Sbjct: 228 EFTHENPLETRNICFFSTNCVEGTARGIVIATGDRTVMGRIATLASGLEVGRTPIAMEIE 287
Query: 542 XXXXXXTGVAVFLGVSFFILSLILEYTWLEAVIFLIGIIVANVPEGXXXXXXXXXXXXXK 721
TGVAVFLGVSFF+LSLIL Y+WLEAVIFLIGIIVANVPEG K
Sbjct: 288 HFIQLITGVAVFLGVSFFVLSLILGYSWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAK 347
Query: 722 RMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGV 901
RMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTE+QSG
Sbjct: 348 RMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSGA 407
Query: 902 SFDKTSATWLALSRIAGLCNRAVFQANQENLPILKRAVAGDASESALLKCIELCCGSVKE 1081
+FDK S TW ALSRIAGLCNRAVF+A QEN+ + KR AGDASESALLKCIEL CGSV++
Sbjct: 408 TFDKRSPTWTALSRIAGLCNRAVFKAGQENISVSKRDTAGDASESALLKCIELSCGSVRK 467
Query: 1082 MRERYTKIVEIPFNSTNKYQLSIHKNPNTAEPRHLLVMKGAPEKDPGRCSSILIHGKGQP 1261
MR+R K+ EIPFNSTNKYQLSIH+ ++ + H+LVMKGAPE+ RCS+IL+ GK P
Sbjct: 468 MRDRNPKVAEIPFNSTNKYQLSIHEREDSPQ-SHVLVMKGAPERILDRCSTILVQGKEIP 526
Query: 1262 LDEELKDAFQNAYLELGGPGKRVLGFCHFFLPDKQVPRSFQFDTDHVKFPLENLCLRGLI 1441
LD+E++DAFQNAY+ELGG G+RVLGFC LP + PR F+FDTD + FP E LC GL+
Sbjct: 527 LDKEMQDAFQNAYMELGGLGERVLGFCQLNLPSGKFPRGFRFDTDELNFPTEKLCFVGLM 586
Query: 1442 SMNDPPRAXVPDAV 1483
SM DPPRA VPDAV
Sbjct: 587 SMIDPPRAAVPDAV 600
>ref|XP_545754.2| PREDICTED: similar to Sodium/potassium-transporting ATPase alpha-4
chain (Sodium pump 4) (Na+/K+ ATPase 4) [Canis
familiaris].
Length = 1124
Score = 678 bits (1750), Expect = 0.0
Identities = 352/494 (71%), Positives = 392/494 (79%)
Frame = +2
Query: 2 LCFLAYGIQAATEEEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQA 181
LCFLAYGIQ +E+ DNLYLG+VL+ VV+ITGCFSYYQEAKSSKIMESF+NMVPQQA
Sbjct: 213 LCFLAYGIQVHYKEDSTKDNLYLGMVLAIVVMITGCFSYYQEAKSSKIMESFRNMVPQQA 272
Query: 182 LVIRNGEKMSINAEEVVVGDLVEVKGGDRIPADLRIISANGCKVDNSSLTGESEPQTRSP 361
LVIR GEKM IN E+VVVGDLVEVKGGDRIPADLR+IS GCKVDNSSLTGESEPQTRSP
Sbjct: 273 LVIRAGEKMQINVEDVVVGDLVEVKGGDRIPADLRLISTQGCKVDNSSLTGESEPQTRSP 332
Query: 362 DFTNENPLETRNIAFFSTNCVEGTARGIVVYTGDRTVMGRIATLASGLEGGQTPXXXXXX 541
DFT+ENPLETRNI FFSTNCVEGTARGIV+ TGD TVMGRIATL SGL G+TP
Sbjct: 333 DFTHENPLETRNICFFSTNCVEGTARGIVIATGDSTVMGRIATLTSGLVVGKTPIAAEIE 392
Query: 542 XXXXXXTGVAVFLGVSFFILSLILEYTWLEAVIFLIGIIVANVPEGXXXXXXXXXXXXXK 721
TGVA FLGVSFF+LSLIL Y WLEAVIFLIGIIVANVPEG K
Sbjct: 393 HFIQLITGVAGFLGVSFFVLSLILGYGWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAK 452
Query: 722 RMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGV 901
RM+RKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFD I+EADT+E Q+G
Sbjct: 453 RMSRKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDKTIYEADTSEEQTGK 512
Query: 902 SFDKTSATWLALSRIAGLCNRAVFQANQENLPILKRAVAGDASESALLKCIELCCGSVKE 1081
+F K S TW L+RIA LCNRA F+ NQE LPI KRA GDASESALLK +E SVKE
Sbjct: 513 TFAKGSTTWFILARIAALCNRADFKPNQETLPIAKRATTGDASESALLKFMEQSYSSVKE 572
Query: 1082 MRERYTKIVEIPFNSTNKYQLSIHKNPNTAEPRHLLVMKGAPEKDPGRCSSILIHGKGQP 1261
MRE+ K+ EIPFNSTNKYQ+SIH + ++ H+L+MKGAPE+ CS+ L+ GK P
Sbjct: 573 MREQNPKVAEIPFNSTNKYQMSIHLQEDGSQ-AHVLMMKGAPERILEFCSTYLLKGKEYP 631
Query: 1262 LDEELKDAFQNAYLELGGPGKRVLGFCHFFLPDKQVPRSFQFDTDHVKFPLENLCLRGLI 1441
+D+E+K FQNAYLELGG G+RVLGFC LP + F+F+TD + FP+ENLC GLI
Sbjct: 632 MDDEMKKNFQNAYLELGGLGERVLGFCFLNLP-STFSKGFRFNTDEINFPMENLCFVGLI 690
Query: 1442 SMNDPPRAXVPDAV 1483
SM DPPRA VPDAV
Sbjct: 691 SMIDPPRAAVPDAV 704
>ref|XP_848278.1| PREDICTED: similar to Potassium-transporting ATPase alpha chain 2
(Proton pump) (Non-gastric H(+)/K(+) ATPase alpha
subunit) [Canis familiaris].
Length = 1306
Score = 600 bits (1548), Expect = e-172
Identities = 295/494 (59%), Positives = 379/494 (76%)
Frame = +2
Query: 2 LCFLAYGIQAATEEEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQA 181
LC++AYGIQ + + D++YLG VL+ VVI+TG F+YYQEAKS+ IM +F M+PQQA
Sbjct: 392 LCWIAYGIQYSMNKSSSLDDVYLGCVLALVVILTGIFAYYQEAKSTNIMSTFNKMIPQQA 451
Query: 182 LVIRNGEKMSINAEEVVVGDLVEVKGGDRIPADLRIISANGCKVDNSSLTGESEPQTRSP 361
VIR+ EK +I AE++VVGD+VE+KGGDR+PAD+R++SA GCKVDNSSLTGESEPQ RS
Sbjct: 452 FVIRDSEKKTIPAEQLVVGDIVEIKGGDRVPADIRLLSAQGCKVDNSSLTGESEPQARSS 511
Query: 362 DFTNENPLETRNIAFFSTNCVEGTARGIVVYTGDRTVMGRIATLASGLEGGQTPXXXXXX 541
+FT+++ LET+NIAF+ST C+EGTA G+V+ TGDRT++G+IA+LASG+ +TP
Sbjct: 512 EFTHDSLLETKNIAFYSTTCLEGTATGMVINTGDRTIIGQIASLASGVGNEKTPIAIEIE 571
Query: 542 XXXXXXTGVAVFLGVSFFILSLILEYTWLEAVIFLIGIIVANVPEGXXXXXXXXXXXXXK 721
GVAV +G+ FFI+++ L+Y L+A+IFLIGIIVANVPEG K
Sbjct: 572 HFVHIVAGVAVSIGILFFIIAVSLKYQVLDAIIFLIGIIVANVPEGLLATVTVTLSLTAK 631
Query: 722 RMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGV 901
RMA+KNCLVKNLEAVETLGSTS ICSDKTGTLTQNRMTVAH+WFDNQI ADT+E+ S
Sbjct: 632 RMAKKNCLVKNLEAVETLGSTSIICSDKTGTLTQNRMTVAHLWFDNQIFIADTSEDHSNQ 691
Query: 902 SFDKTSATWLALSRIAGLCNRAVFQANQENLPILKRAVAGDASESALLKCIELCCGSVKE 1081
FD++S TW +LS+I LCNRA F+ QE++PI+KR V GDASE+ALLK E+ G V E
Sbjct: 692 VFDQSSGTWASLSKIITLCNRAEFKPGQESVPIMKRIVVGDASETALLKFSEVILGDVME 751
Query: 1082 MRERYTKIVEIPFNSTNKYQLSIHKNPNTAEPRHLLVMKGAPEKDPGRCSSILIHGKGQP 1261
+R+R K+ EIPFNSTNK+QLSIHK + + R L+VMKGAPE+ +CS+I+++G+ QP
Sbjct: 752 IRKRNHKVAEIPFNSTNKFQLSIHKTDDPNDKRFLMVMKGAPERILEKCSTIMVNGQEQP 811
Query: 1262 LDEELKDAFQNAYLELGGPGKRVLGFCHFFLPDKQVPRSFQFDTDHVKFPLENLCLRGLI 1441
LD+ +AF AY+ELGG G+RVLGFCH +LP + P ++ FD D + FP NLC GL+
Sbjct: 812 LDKSTAEAFHTAYMELGGLGERVLGFCHLYLPADEFPETYTFDVDAMNFPTSNLCFVGLL 871
Query: 1442 SMNDPPRAXVPDAV 1483
SM DPPR+ VPDAV
Sbjct: 872 SMIDPPRSTVPDAV 885
>ref|NP_001003342.1| potassium-transporting ATPase alpha chain 1 [Canis lupus familiaris].
Length = 1034
Score = 600 bits (1547), Expect = e-171
Identities = 293/494 (59%), Positives = 372/494 (75%)
Frame = +2
Query: 2 LCFLAYGIQAATEEEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQA 181
+C +A+ IQA+ + +DNLYL + L AVV++TGCF YYQE KS+ I+ SFKN+VPQQA
Sbjct: 120 ICLIAFAIQASEGDLTTDDNLYLALALIAVVVVTGCFGYYQEFKSTNIIASFKNLVPQQA 179
Query: 182 LVIRNGEKMSINAEEVVVGDLVEVKGGDRIPADLRIISANGCKVDNSSLTGESEPQTRSP 361
VIR+G+K INA+++VVGDLVE+KGGDR+PAD+RI+ A GCKVDNSSLTGESEPQTRSP
Sbjct: 180 TVIRDGDKFQINADQLVVGDLVEMKGGDRVPADIRILQAQGCKVDNSSLTGESEPQTRSP 239
Query: 362 DFTNENPLETRNIAFFSTNCVEGTARGIVVYTGDRTVMGRIATLASGLEGGQTPXXXXXX 541
+ T+E+PLETRNIA FST C+EGTA+G+VV TGDRT++GRIA+LASG+E +TP
Sbjct: 240 ECTHESPLETRNIALFSTMCLEGTAQGLVVNTGDRTIIGRIASLASGVENEKTPIAIEIE 299
Query: 542 XXXXXXTGVAVFLGVSFFILSLILEYTWLEAVIFLIGIIVANVPEGXXXXXXXXXXXXXK 721
G+A+ G +FF++++ + YT+L A++F + I+VA VPEG K
Sbjct: 300 HFVDIIAGLAILFGATFFVVAMCIGYTFLRAMVFFMAIVVAYVPEGLLATVTVCLSLTAK 359
Query: 722 RMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGV 901
R+A KNC+VKNLEAVETLGS S ICSDKTGTLTQN MTV+++WFDN IH ADTTE+QSG
Sbjct: 360 RLASKNCVVKNLEAVETLGSKSVICSDKTGTLTQNSMTVSNLWFDNHIHTADTTEDQSGQ 419
Query: 902 SFDKTSATWLALSRIAGLCNRAVFQANQENLPILKRAVAGDASESALLKCIELCCGSVKE 1081
FD++S TW AL R+ LCNRA F++ Q+ +P+ KR V GDASE+ALLK EL G+
Sbjct: 420 KFDQSSETWRALCRVLTLCNRAAFKSGQDAVPVPKRIVIGDASETALLKFSELTLGNAMG 479
Query: 1082 MRERYTKIVEIPFNSTNKYQLSIHKNPNTAEPRHLLVMKGAPEKDPGRCSSILIHGKGQP 1261
RER+ K+ EIPFNSTNK+QLSIH + +PRH+LVMKGAPE+ RCSSILI G+ P
Sbjct: 480 YRERFPKVCEIPFNSTNKFQLSIHTLEDPRDPRHVLVMKGAPERVLERCSSILIKGQELP 539
Query: 1262 LDEELKDAFQNAYLELGGPGKRVLGFCHFFLPDKQVPRSFQFDTDHVKFPLENLCLRGLI 1441
LDE+ ++AFQ AYL LGG G+RVLGFC +L +K P + FD + + FP LC GL+
Sbjct: 540 LDEQWREAFQTAYLSLGGLGERVLGFCQLYLSEKDYPPGYAFDVEAMNFPTSGLCFAGLV 599
Query: 1442 SMNDPPRAXVPDAV 1483
SM DPPRA VPDAV
Sbjct: 600 SMIDPPRATVPDAV 613
>ref|XP_536762.2| PREDICTED: similar to Probable calcium-transporting ATPase KIAA0703
[Canis familiaris].
Length = 921
Score = 177 bits (450), Expect = 2e-44
Identities = 150/486 (30%), Positives = 223/486 (45%), Gaps = 16/486 (3%)
Frame = +2
Query: 74 VVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQALVIRNGEKMSINAEEVVVGDLVEV 253
V ++ V+I ++ QE +S K +E +VP + IR G+ + A ++V GD+V +
Sbjct: 110 VSIAMAVLIVVTVAFIQEYRSEKSLEELTKLVPPECNCIREGKLQHLLARDLVPGDIVSL 169
Query: 254 KGGDRIPADLRIISANGCKVDNSSLTGESEP--QTRSPDFTNENPLET-RNIAFFSTNCV 424
GDRIPAD+R+ VD SS TGE+EP +T SP T L T NI F T
Sbjct: 170 SIGDRIPADIRLTEVTDLLVDESSFTGEAEPCSKTDSP-LTGGGDLTTLSNIVFMGTLVQ 228
Query: 425 EGTARGIVVYTGDRTVMGRIATLASGLEGGQTPXXXXXXXXXXXXTGVAVFLGVSFFILS 604
G +G+V+ TG+R+ G + + E +TP T +F SF I+
Sbjct: 229 YGKGQGVVIGTGERSQFGEVFKMMQAEETPKTPLQKSMDKLGKQLT---LF---SFGIIG 282
Query: 605 LILEYTWLEA----VIFLIGI--IVANVPEGXXXXXXXXXXXXXKRMARKNCLVKNLEAV 766
LI+ WL+ +F IG+ VA +PEG RMA+K +VK L V
Sbjct: 283 LIMFTGWLQGKPLLSMFTIGVSLAVAAIPEGLPIVVTVTLVLGVLRMAKKRVIVKKLPIV 342
Query: 767 ETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGVSFDKTSATWLALSR- 943
ETLG + ICSDKTGTLT N MTV + + +H SGV ++ L S+
Sbjct: 343 ETLGCCNVICSDKTGTLTANEMTVTQLVTSDGLH-----AEVSGVGYNGKGTVCLLPSKE 397
Query: 944 -IAGLCNRAVFQANQ-----ENLPILKRAVAGDASESALLKCIELCCGSVKEMRERYTKI 1105
I N +V + + N I K V G +E AL+ + ++++ Y +
Sbjct: 398 VIKEFNNVSVGKLVEAGCVANNAVIRKNTVMGQPTEGALIALAMKM--DLSDIKDSYVRK 455
Query: 1106 VEIPFNSTNKYQLSIHKNPNTAEPRHLLVMKGAPEKDPGRCSSILIHGKGQPLDEELKDA 1285
EIPF+S K+ +++ +P + + +KGA E+ C+ G PL + +
Sbjct: 456 KEIPFSSEQKW-MAVKCSPKNEDQEDIYFIKGAFEEVINYCTMYNNGGIPLPLTPQQRSF 514
Query: 1286 FQNAYLELGGPGKRVLGFCHFFLPDKQVPRSFQFDTDHVKFPLENLCLRGLISMNDPPRA 1465
+Q +G G RVL P+ L L GL+ + DPPRA
Sbjct: 515 WQQEEKRMGSLGLRVLALASG--PE-----------------LGKLTFLGLVGIIDPPRA 555
Query: 1466 XVPDAV 1483
V +AV
Sbjct: 556 GVKEAV 561
>ref|XP_851493.1| PREDICTED: similar to calcium-transporting ATPase 2C1 isoform 1a
isoform 2 [Canis familiaris].
Length = 953
Score = 174 bits (442), Expect = 2e-43
Identities = 136/485 (28%), Positives = 216/485 (44%), Gaps = 15/485 (3%)
Frame = +2
Query: 74 VVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQALVIRNGEKMSINAEEVVVGDLVEV 253
V ++ ++I ++ QE +S K +E ++P + +R G+ A ++V GD V +
Sbjct: 138 VSITVAILIVVTVAFVQEYRSEKSLEELSKLMPPECHCVREGKLEHTLARDLVPGDTVYL 197
Query: 254 KGGDRIPADLRIISANGCKVDNSSLTGESEPQTR----SPDFTNENPLETRNIAFFSTNC 421
GDR+PADLR+ A +D SSLTGE+ P ++ P TN + NIAF T
Sbjct: 198 SVGDRVPADLRLFEAVDLSIDESSLTGETTPCSKVTAPQPAATNGDLASRSNIAFMGTLV 257
Query: 422 VEGTARGIVVYTGDRTVMGRIATLASGLEGGQTPXXXXXXXXXXXXTGVAVFLGVSFFIL 601
G A+GIV+ TG+ + G + + E +TP + SF I+
Sbjct: 258 RCGKAKGIVIGTGENSEFGEVFKMMQAEEAPKTPLQKSMDLLGKQLSFY------SFGII 311
Query: 602 SLILEYTWL------EAVIFLIGIIVANVPEGXXXXXXXXXXXXXKRMARKNCLVKNLEA 763
+I+ WL E + + VA +PEG RM +K +VK L
Sbjct: 312 GIIMLVGWLLGKDILEMFTISVSLAVAAIPEGLPIVVTVTLALGVMRMVKKRAIVKKLPI 371
Query: 764 VETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGVSFDKTSATWLALSR 943
VETLG + ICSDKTGTLT+N MTV H++ + +H T GV ++ +
Sbjct: 372 VETLGCCNVICSDKTGTLTKNEMTVTHIFTSDGLHAEVT-----GVGYNPFGEVIVDGDV 426
Query: 944 IAGLCNRAVFQANQ-----ENLPILKRAVAGDASESALLKCIELCCGSVKEMRERYTKIV 1108
+ G N AV + + + I + G +E AL+ + + G + +++ Y +
Sbjct: 427 VHGFYNPAVSRIVEAGCVCNDAVIRNNTLMGKPTEGALI-ALAMKMG-LDGLQQDYVRKA 484
Query: 1109 EIPFNSTNKYQLSIHKNPNTAEPRHLLVMKGAPEKDPGRCSSILIHGKGQPLDEELKDAF 1288
E PF+S K+ + + + MKGA E+ C++ G+ L ++ +D +
Sbjct: 485 EYPFSSEQKWMAVKCVHRTQQDGPEICFMKGAYEQVIKYCTTYYSKGQTLALTQQQRDLY 544
Query: 1289 QNAYLELGGPGKRVLGFCHFFLPDKQVPRSFQFDTDHVKFPLENLCLRGLISMNDPPRAX 1468
Q +G G RVL P+ L L GL+ + DPPR
Sbjct: 545 QQEKARMGSAGLRVLALASG--PE-----------------LGQLTFLGLVGIIDPPRTG 585
Query: 1469 VPDAV 1483
V +AV
Sbjct: 586 VKEAV 590
>ref|XP_863766.1| PREDICTED: similar to calcium-transporting ATPase 2C1 isoform 1b
isoform 9 [Canis familiaris].
Length = 939
Score = 174 bits (442), Expect = 2e-43
Identities = 136/485 (28%), Positives = 216/485 (44%), Gaps = 15/485 (3%)
Frame = +2
Query: 74 VVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQALVIRNGEKMSINAEEVVVGDLVEV 253
V ++ ++I ++ QE +S K +E ++P + +R G+ A ++V GD V +
Sbjct: 104 VSITVAILIVVTVAFVQEYRSEKSLEELSKLMPPECHCVREGKLEHTLARDLVPGDTVYL 163
Query: 254 KGGDRIPADLRIISANGCKVDNSSLTGESEPQTR----SPDFTNENPLETRNIAFFSTNC 421
GDR+PADLR+ A +D SSLTGE+ P ++ P TN + NIAF T
Sbjct: 164 SVGDRVPADLRLFEAVDLSIDESSLTGETTPCSKVTAPQPAATNGDLASRSNIAFMGTLV 223
Query: 422 VEGTARGIVVYTGDRTVMGRIATLASGLEGGQTPXXXXXXXXXXXXTGVAVFLGVSFFIL 601
G A+GIV+ TG+ + G + + E +TP + SF I+
Sbjct: 224 RCGKAKGIVIGTGENSEFGEVFKMMQAEEAPKTPLQKSMDLLGKQLSFY------SFGII 277
Query: 602 SLILEYTWL------EAVIFLIGIIVANVPEGXXXXXXXXXXXXXKRMARKNCLVKNLEA 763
+I+ WL E + + VA +PEG RM +K +VK L
Sbjct: 278 GIIMLVGWLLGKDILEMFTISVSLAVAAIPEGLPIVVTVTLALGVMRMVKKRAIVKKLPI 337
Query: 764 VETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGVSFDKTSATWLALSR 943
VETLG + ICSDKTGTLT+N MTV H++ + +H T GV ++ +
Sbjct: 338 VETLGCCNVICSDKTGTLTKNEMTVTHIFTSDGLHAEVT-----GVGYNPFGEVIVDGDV 392
Query: 944 IAGLCNRAVFQANQ-----ENLPILKRAVAGDASESALLKCIELCCGSVKEMRERYTKIV 1108
+ G N AV + + + I + G +E AL+ + + G + +++ Y +
Sbjct: 393 VHGFYNPAVSRIVEAGCVCNDAVIRNNTLMGKPTEGALI-ALAMKMG-LDGLQQDYVRKA 450
Query: 1109 EIPFNSTNKYQLSIHKNPNTAEPRHLLVMKGAPEKDPGRCSSILIHGKGQPLDEELKDAF 1288
E PF+S K+ + + + MKGA E+ C++ G+ L ++ +D +
Sbjct: 451 EYPFSSEQKWMAVKCVHRTQQDGPEICFMKGAYEQVIKYCTTYYSKGQTLALTQQQRDLY 510
Query: 1289 QNAYLELGGPGKRVLGFCHFFLPDKQVPRSFQFDTDHVKFPLENLCLRGLISMNDPPRAX 1468
Q +G G RVL P+ L L GL+ + DPPR
Sbjct: 511 QQEKARMGSAGLRVLALASG--PE-----------------LGQLTFLGLVGIIDPPRTG 551
Query: 1469 VPDAV 1483
V +AV
Sbjct: 552 VKEAV 556
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 61,190,899
Number of extensions: 1728766
Number of successful extensions: 6519
Number of sequences better than 1.0e-05: 114
Number of HSP's gapped: 6350
Number of HSP's successfully gapped: 196
Length of query: 494
Length of database: 18,874,504
Length adjustment: 107
Effective length of query: 387
Effective length of database: 15,307,552
Effective search space: 5924022624
Effective search space used: 5924022624
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-001369
(1484 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001153706.1| sodium/potassium-transporting ATPase subunit... 875 0.0
Alignment gi|NP_000692.2| sodium/potassium-transporting ATPase subunit al... 875 0.0
Alignment gi|NP_001153705.1| sodium/potassium-transporting ATPase subunit... 875 0.0
Alignment gi|NP_689509.1| sodium/potassium-transporting ATPase subunit al... 769 0.0
Alignment gi|NP_000693.1| sodium/potassium-transporting ATPase subunit al... 756 0.0
Alignment gi|NP_653300.2| sodium/potassium-transporting ATPase subunit al... 677 0.0
Alignment gi|NP_000695.2| potassium-transporting ATPase alpha chain 1 [Ho... 609 e-174
Alignment gi|NP_001667.4| potassium-transporting ATPase alpha chain 2 iso... 597 e-171
Alignment gi|NP_001172014.1| potassium-transporting ATPase alpha chain 2 ... 590 e-169
Alignment gi|NP_001186108.1| calcium-transporting ATPase type 2C member 1... 175 1e-43
>ref|NP_001153706.1| sodium/potassium-transporting ATPase subunit alpha-1 isoform d [Homo
sapiens].
Length = 992
Score = 875 bits (2260), Expect = 0.0
Identities = 444/494 (89%), Positives = 452/494 (91%)
Frame = +2
Query: 2 LCFLAYGIQAATEEEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQA 181
LCFLAY IQAATEEEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQA
Sbjct: 79 LCFLAYSIQAATEEEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQA 138
Query: 182 LVIRNGEKMSINAEEVVVGDLVEVKGGDRIPADLRIISANGCKVDNSSLTGESEPQTRSP 361
LVIRNGEKMSINAEEVVVGDLVEVKGGDRIPADLRIISANGCKVDNSSLTGESEPQTRSP
Sbjct: 139 LVIRNGEKMSINAEEVVVGDLVEVKGGDRIPADLRIISANGCKVDNSSLTGESEPQTRSP 198
Query: 362 DFTNENPLETRNIAFFSTNCVEGTARGIVVYTGDRTVMGRIATLASGLEGGQTPXXXXXX 541
DFTNENPLETRNIAFFSTNCVEGTARGIVVYTGDRTVMGRIATLASGLEGGQTP
Sbjct: 199 DFTNENPLETRNIAFFSTNCVEGTARGIVVYTGDRTVMGRIATLASGLEGGQTPIAAEIE 258
Query: 542 XXXXXXTGVAVFLGVSFFILSLILEYTWLEAVIFLIGIIVANVPEGXXXXXXXXXXXXXK 721
TGVAVFLGVSFFILSLILEYTWLEAVIFLIGIIVANVPEG K
Sbjct: 259 HFIHIITGVAVFLGVSFFILSLILEYTWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAK 318
Query: 722 RMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGV 901
RMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGV
Sbjct: 319 RMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGV 378
Query: 902 SFDKTSATWLALSRIAGLCNRAVFQANQENLPILKRAVAGDASESALLKCIELCCGSVKE 1081
SFDKTSATWLALSRIAGLCNRAVFQANQENLPILKRAVAGDASESALLKCIELCCGSVKE
Sbjct: 379 SFDKTSATWLALSRIAGLCNRAVFQANQENLPILKRAVAGDASESALLKCIELCCGSVKE 438
Query: 1082 MRERYTKIVEIPFNSTNKYQLSIHKNPNTAEPRHLLVMKGAPEKDPGRCSSILIHGKGQP 1261
MRERY KIVEIPFNSTNKYQLSIHKNPNT+EP+HLLVMKGAPE+ RCSSIL+HGK QP
Sbjct: 439 MRERYAKIVEIPFNSTNKYQLSIHKNPNTSEPQHLLVMKGAPERILDRCSSILLHGKEQP 498
Query: 1262 LDEELKDAFQNAYLELGGPGKRVLGFCHFFLPDKQVPRSFQFDTDHVKFPLENLCLRGLI 1441
LDEELKDAFQNAYLELGG G+RVLGFCH FLPD+Q P FQFDTD V FP++NLC GLI
Sbjct: 499 LDEELKDAFQNAYLELGGLGERVLGFCHLFLPDEQFPEGFQFDTDDVNFPIDNLCFVGLI 558
Query: 1442 SMNDPPRAXVPDAV 1483
SM DPPRA VPDAV
Sbjct: 559 SMIDPPRAAVPDAV 572
>ref|NP_000692.2| sodium/potassium-transporting ATPase subunit alpha-1 isoform a [Homo
sapiens].
Length = 1023
Score = 875 bits (2260), Expect = 0.0
Identities = 444/494 (89%), Positives = 452/494 (91%)
Frame = +2
Query: 2 LCFLAYGIQAATEEEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQA 181
LCFLAY IQAATEEEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQA
Sbjct: 110 LCFLAYSIQAATEEEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQA 169
Query: 182 LVIRNGEKMSINAEEVVVGDLVEVKGGDRIPADLRIISANGCKVDNSSLTGESEPQTRSP 361
LVIRNGEKMSINAEEVVVGDLVEVKGGDRIPADLRIISANGCKVDNSSLTGESEPQTRSP
Sbjct: 170 LVIRNGEKMSINAEEVVVGDLVEVKGGDRIPADLRIISANGCKVDNSSLTGESEPQTRSP 229
Query: 362 DFTNENPLETRNIAFFSTNCVEGTARGIVVYTGDRTVMGRIATLASGLEGGQTPXXXXXX 541
DFTNENPLETRNIAFFSTNCVEGTARGIVVYTGDRTVMGRIATLASGLEGGQTP
Sbjct: 230 DFTNENPLETRNIAFFSTNCVEGTARGIVVYTGDRTVMGRIATLASGLEGGQTPIAAEIE 289
Query: 542 XXXXXXTGVAVFLGVSFFILSLILEYTWLEAVIFLIGIIVANVPEGXXXXXXXXXXXXXK 721
TGVAVFLGVSFFILSLILEYTWLEAVIFLIGIIVANVPEG K
Sbjct: 290 HFIHIITGVAVFLGVSFFILSLILEYTWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAK 349
Query: 722 RMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGV 901
RMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGV
Sbjct: 350 RMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGV 409
Query: 902 SFDKTSATWLALSRIAGLCNRAVFQANQENLPILKRAVAGDASESALLKCIELCCGSVKE 1081
SFDKTSATWLALSRIAGLCNRAVFQANQENLPILKRAVAGDASESALLKCIELCCGSVKE
Sbjct: 410 SFDKTSATWLALSRIAGLCNRAVFQANQENLPILKRAVAGDASESALLKCIELCCGSVKE 469
Query: 1082 MRERYTKIVEIPFNSTNKYQLSIHKNPNTAEPRHLLVMKGAPEKDPGRCSSILIHGKGQP 1261
MRERY KIVEIPFNSTNKYQLSIHKNPNT+EP+HLLVMKGAPE+ RCSSIL+HGK QP
Sbjct: 470 MRERYAKIVEIPFNSTNKYQLSIHKNPNTSEPQHLLVMKGAPERILDRCSSILLHGKEQP 529
Query: 1262 LDEELKDAFQNAYLELGGPGKRVLGFCHFFLPDKQVPRSFQFDTDHVKFPLENLCLRGLI 1441
LDEELKDAFQNAYLELGG G+RVLGFCH FLPD+Q P FQFDTD V FP++NLC GLI
Sbjct: 530 LDEELKDAFQNAYLELGGLGERVLGFCHLFLPDEQFPEGFQFDTDDVNFPIDNLCFVGLI 589
Query: 1442 SMNDPPRAXVPDAV 1483
SM DPPRA VPDAV
Sbjct: 590 SMIDPPRAAVPDAV 603
>ref|NP_001153705.1| sodium/potassium-transporting ATPase subunit alpha-1 isoform c [Homo
sapiens].
Length = 1023
Score = 875 bits (2260), Expect = 0.0
Identities = 444/494 (89%), Positives = 452/494 (91%)
Frame = +2
Query: 2 LCFLAYGIQAATEEEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQA 181
LCFLAY IQAATEEEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQA
Sbjct: 110 LCFLAYSIQAATEEEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQA 169
Query: 182 LVIRNGEKMSINAEEVVVGDLVEVKGGDRIPADLRIISANGCKVDNSSLTGESEPQTRSP 361
LVIRNGEKMSINAEEVVVGDLVEVKGGDRIPADLRIISANGCKVDNSSLTGESEPQTRSP
Sbjct: 170 LVIRNGEKMSINAEEVVVGDLVEVKGGDRIPADLRIISANGCKVDNSSLTGESEPQTRSP 229
Query: 362 DFTNENPLETRNIAFFSTNCVEGTARGIVVYTGDRTVMGRIATLASGLEGGQTPXXXXXX 541
DFTNENPLETRNIAFFSTNCVEGTARGIVVYTGDRTVMGRIATLASGLEGGQTP
Sbjct: 230 DFTNENPLETRNIAFFSTNCVEGTARGIVVYTGDRTVMGRIATLASGLEGGQTPIAAEIE 289
Query: 542 XXXXXXTGVAVFLGVSFFILSLILEYTWLEAVIFLIGIIVANVPEGXXXXXXXXXXXXXK 721
TGVAVFLGVSFFILSLILEYTWLEAVIFLIGIIVANVPEG K
Sbjct: 290 HFIHIITGVAVFLGVSFFILSLILEYTWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAK 349
Query: 722 RMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGV 901
RMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGV
Sbjct: 350 RMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGV 409
Query: 902 SFDKTSATWLALSRIAGLCNRAVFQANQENLPILKRAVAGDASESALLKCIELCCGSVKE 1081
SFDKTSATWLALSRIAGLCNRAVFQANQENLPILKRAVAGDASESALLKCIELCCGSVKE
Sbjct: 410 SFDKTSATWLALSRIAGLCNRAVFQANQENLPILKRAVAGDASESALLKCIELCCGSVKE 469
Query: 1082 MRERYTKIVEIPFNSTNKYQLSIHKNPNTAEPRHLLVMKGAPEKDPGRCSSILIHGKGQP 1261
MRERY KIVEIPFNSTNKYQLSIHKNPNT+EP+HLLVMKGAPE+ RCSSIL+HGK QP
Sbjct: 470 MRERYAKIVEIPFNSTNKYQLSIHKNPNTSEPQHLLVMKGAPERILDRCSSILLHGKEQP 529
Query: 1262 LDEELKDAFQNAYLELGGPGKRVLGFCHFFLPDKQVPRSFQFDTDHVKFPLENLCLRGLI 1441
LDEELKDAFQNAYLELGG G+RVLGFCH FLPD+Q P FQFDTD V FP++NLC GLI
Sbjct: 530 LDEELKDAFQNAYLELGGLGERVLGFCHLFLPDEQFPEGFQFDTDDVNFPIDNLCFVGLI 589
Query: 1442 SMNDPPRAXVPDAV 1483
SM DPPRA VPDAV
Sbjct: 590 SMIDPPRAAVPDAV 603
>ref|NP_689509.1| sodium/potassium-transporting ATPase subunit alpha-3 [Homo sapiens].
Length = 1013
Score = 769 bits (1986), Expect = 0.0
Identities = 387/494 (78%), Positives = 424/494 (85%)
Frame = +2
Query: 2 LCFLAYGIQAATEEEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQA 181
LCFLAYGIQA TE++P DNLYLG+VL+AVVIITGCFSYYQEAKSSKIMESFKNMVPQQA
Sbjct: 100 LCFLAYGIQAGTEDDPSGDNLYLGIVLAAVVIITGCFSYYQEAKSSKIMESFKNMVPQQA 159
Query: 182 LVIRNGEKMSINAEEVVVGDLVEVKGGDRIPADLRIISANGCKVDNSSLTGESEPQTRSP 361
LVIR GEKM +NAEEVVVGDLVE+KGGDR+PADLRIISA+GCKVDNSSLTGESEPQTRSP
Sbjct: 160 LVIREGEKMQVNAEEVVVGDLVEIKGGDRVPADLRIISAHGCKVDNSSLTGESEPQTRSP 219
Query: 362 DFTNENPLETRNIAFFSTNCVEGTARGIVVYTGDRTVMGRIATLASGLEGGQTPXXXXXX 541
D T++NPLETRNI FFSTNCVEGTARG+VV TGDRTVMGRIATLASGLE G+TP
Sbjct: 220 DCTHDNPLETRNITFFSTNCVEGTARGVVVATGDRTVMGRIATLASGLEVGKTPIAIEIE 279
Query: 542 XXXXXXTGVAVFLGVSFFILSLILEYTWLEAVIFLIGIIVANVPEGXXXXXXXXXXXXXK 721
TGVAVFLGVSFFILSLIL YTWLEAVIFLIGIIVANVPEG K
Sbjct: 280 HFIQLITGVAVFLGVSFFILSLILGYTWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAK 339
Query: 722 RMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGV 901
RMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTE+QSG
Sbjct: 340 RMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSGT 399
Query: 902 SFDKTSATWLALSRIAGLCNRAVFQANQENLPILKRAVAGDASESALLKCIELCCGSVKE 1081
SFDK+S TW+ALS IAGLCNRAVF+ Q+N+P+LKR VAGDASESALLKCIEL GSVK
Sbjct: 400 SFDKSSHTWVALSHIAGLCNRAVFKGGQDNIPVLKRDVAGDASESALLKCIELSSGSVKL 459
Query: 1082 MRERYTKIVEIPFNSTNKYQLSIHKNPNTAEPRHLLVMKGAPEKDPGRCSSILIHGKGQP 1261
MRER K+ EIPFNSTNKYQLSIH+ + + R+LLVMKGAPE+ RCS+IL+ GK QP
Sbjct: 460 MRERNKKVAEIPFNSTNKYQLSIHETEDPNDNRYLLVMKGAPERILDRCSTILLQGKEQP 519
Query: 1262 LDEELKDAFQNAYLELGGPGKRVLGFCHFFLPDKQVPRSFQFDTDHVKFPLENLCLRGLI 1441
LDEE+K+AFQNAYLELGG G+RVLGFCH++LP++Q P+ F FD D V F +NLC GL+
Sbjct: 520 LDEEMKEAFQNAYLELGGLGERVLGFCHYYLPEEQFPKGFAFDCDDVNFTTDNLCFVGLM 579
Query: 1442 SMNDPPRAXVPDAV 1483
SM DPPRA VPDAV
Sbjct: 580 SMIDPPRAAVPDAV 593
>ref|NP_000693.1| sodium/potassium-transporting ATPase subunit alpha-2 proprotein [Homo
sapiens].
Length = 1020
Score = 756 bits (1952), Expect = 0.0
Identities = 382/494 (77%), Positives = 421/494 (85%)
Frame = +2
Query: 2 LCFLAYGIQAATEEEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQA 181
LCFLAYGIQAA E+EP NDNLYLGVVL+AVVI+TGCFSYYQEAKSSKIM+SFKNMVPQQA
Sbjct: 108 LCFLAYGIQAAMEDEPSNDNLYLGVVLAAVVIVTGCFSYYQEAKSSKIMDSFKNMVPQQA 167
Query: 182 LVIRNGEKMSINAEEVVVGDLVEVKGGDRIPADLRIISANGCKVDNSSLTGESEPQTRSP 361
LVIR GEKM INAEEVVVGDLVEVKGGDR+PADLRIIS++GCKVDNSSLTGESEPQTRSP
Sbjct: 168 LVIREGEKMQINAEEVVVGDLVEVKGGDRVPADLRIISSHGCKVDNSSLTGESEPQTRSP 227
Query: 362 DFTNENPLETRNIAFFSTNCVEGTARGIVVYTGDRTVMGRIATLASGLEGGQTPXXXXXX 541
+FT+ENPLETRNI FFSTNCVEGTARGIV+ TGDRTVMGRIATLASGLE G+TP
Sbjct: 228 EFTHENPLETRNICFFSTNCVEGTARGIVIATGDRTVMGRIATLASGLEVGRTPIAMEIE 287
Query: 542 XXXXXXTGVAVFLGVSFFILSLILEYTWLEAVIFLIGIIVANVPEGXXXXXXXXXXXXXK 721
TGVAVFLGVSFF+LSLIL Y+WLEAVIFLIGIIVANVPEG K
Sbjct: 288 HFIQLITGVAVFLGVSFFVLSLILGYSWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAK 347
Query: 722 RMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGV 901
RMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTE+QSG
Sbjct: 348 RMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSGA 407
Query: 902 SFDKTSATWLALSRIAGLCNRAVFQANQENLPILKRAVAGDASESALLKCIELCCGSVKE 1081
+FDK S TW ALSRIAGLCNRAVF+A QEN+ + KR AGDASESALLKCIEL CGSV++
Sbjct: 408 TFDKRSPTWTALSRIAGLCNRAVFKAGQENISVSKRDTAGDASESALLKCIELSCGSVRK 467
Query: 1082 MRERYTKIVEIPFNSTNKYQLSIHKNPNTAEPRHLLVMKGAPEKDPGRCSSILIHGKGQP 1261
MR+R K+ EIPFNSTNKYQLSIH+ ++ + H+LVMKGAPE+ RCS+IL+ GK P
Sbjct: 468 MRDRNPKVAEIPFNSTNKYQLSIHEREDSPQ-SHVLVMKGAPERILDRCSTILVQGKEIP 526
Query: 1262 LDEELKDAFQNAYLELGGPGKRVLGFCHFFLPDKQVPRSFQFDTDHVKFPLENLCLRGLI 1441
LD+E++DAFQNAY+ELGG G+RVLGFC LP + PR F+FDTD + FP E LC GL+
Sbjct: 527 LDKEMQDAFQNAYMELGGLGERVLGFCQLNLPSGKFPRGFKFDTDELNFPTEKLCFVGLM 586
Query: 1442 SMNDPPRAXVPDAV 1483
SM DPPRA VPDAV
Sbjct: 587 SMIDPPRAAVPDAV 600
>ref|NP_653300.2| sodium/potassium-transporting ATPase subunit alpha-4 isoform 1 [Homo
sapiens].
Length = 1029
Score = 677 bits (1747), Expect = 0.0
Identities = 347/494 (70%), Positives = 394/494 (79%)
Frame = +2
Query: 2 LCFLAYGIQAATEEEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQA 181
LCF+AY IQ EEP DNLYL +VLS VVI+TGCFSYYQEAKSSKIMESFKNMVPQQA
Sbjct: 118 LCFVAYSIQIYFNEEPTKDNLYLSIVLSVVVIVTGCFSYYQEAKSSKIMESFKNMVPQQA 177
Query: 182 LVIRNGEKMSINAEEVVVGDLVEVKGGDRIPADLRIISANGCKVDNSSLTGESEPQTRSP 361
LVIR GEKM IN +EVV+GDLVE+KGGDR+PADLR+ISA GCKVDNSSLTGESEPQ+RSP
Sbjct: 178 LVIRGGEKMQINVQEVVLGDLVEIKGGDRVPADLRLISAQGCKVDNSSLTGESEPQSRSP 237
Query: 362 DFTNENPLETRNIAFFSTNCVEGTARGIVVYTGDRTVMGRIATLASGLEGGQTPXXXXXX 541
DFT+ENPLETRNI FFSTNCVEGTARGIV+ TGD TVMGRIA+L SGL GQTP
Sbjct: 238 DFTHENPLETRNICFFSTNCVEGTARGIVIATGDSTVMGRIASLTSGLAVGQTPIAAEIE 297
Query: 542 XXXXXXTGVAVFLGVSFFILSLILEYTWLEAVIFLIGIIVANVPEGXXXXXXXXXXXXXK 721
T VAVFLGV+FF LSL+L Y WLEA+IFLIGIIVANVPEG K
Sbjct: 298 HFIHLITVVAVFLGVTFFALSLLLGYGWLEAIIFLIGIIVANVPEGLLATVTVCLTLTAK 357
Query: 722 RMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGV 901
RMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFD ++EADTTE Q+G
Sbjct: 358 RMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDMTVYEADTTEEQTGK 417
Query: 902 SFDKTSATWLALSRIAGLCNRAVFQANQENLPILKRAVAGDASESALLKCIELCCGSVKE 1081
+F K+S TW L+RIAGLCNRA F+ANQE LPI KRA GDASESALLK IE SV E
Sbjct: 418 TFTKSSDTWFMLARIAGLCNRADFKANQEILPIAKRATTGDASESALLKFIEQSYSSVAE 477
Query: 1082 MRERYTKIVEIPFNSTNKYQLSIHKNPNTAEPRHLLVMKGAPEKDPGRCSSILIHGKGQP 1261
MRE+ K+ EIPFNSTNKYQ+SIH ++++ H+L+MKGAPE+ CS+ L++G+
Sbjct: 478 MREKNPKVAEIPFNSTNKYQMSIHLREDSSQ-THVLMMKGAPERILEFCSTFLLNGQEYS 536
Query: 1262 LDEELKDAFQNAYLELGGPGKRVLGFCHFFLPDKQVPRSFQFDTDHVKFPLENLCLRGLI 1441
+++E+K+AFQNAYLELGG G+RVLGFC LP + F F+TD + FP++NLC GLI
Sbjct: 537 MNDEMKEAFQNAYLELGGLGERVLGFCFLNLP-SSFSKGFPFNTDEINFPMDNLCFVGLI 595
Query: 1442 SMNDPPRAXVPDAV 1483
SM DPPRA VPDAV
Sbjct: 596 SMIDPPRAAVPDAV 609
>ref|NP_000695.2| potassium-transporting ATPase alpha chain 1 [Homo sapiens].
Length = 1035
Score = 609 bits (1571), Expect = e-174
Identities = 297/494 (60%), Positives = 376/494 (76%)
Frame = +2
Query: 2 LCFLAYGIQAATEEEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQA 181
+C +A+ IQA+ + +DNLYL + L AVV++TGCF YYQE KS+ I+ SFKN+VPQQA
Sbjct: 121 ICLIAFAIQASEGDLTTDDNLYLAIALIAVVVVTGCFGYYQEFKSTNIIASFKNLVPQQA 180
Query: 182 LVIRNGEKMSINAEEVVVGDLVEVKGGDRIPADLRIISANGCKVDNSSLTGESEPQTRSP 361
VIR+G+K INA+++VVGDLVE+KGGDR+PAD+RI++A GCKVDNSSLTGESEPQTRSP
Sbjct: 181 TVIRDGDKFQINADQLVVGDLVEMKGGDRVPADIRILAAQGCKVDNSSLTGESEPQTRSP 240
Query: 362 DFTNENPLETRNIAFFSTNCVEGTARGIVVYTGDRTVMGRIATLASGLEGGQTPXXXXXX 541
+ T+E+PLETRNIAFFST C+EGT +G+VV TGDRT++GRIA+LASG+E +TP
Sbjct: 241 ECTHESPLETRNIAFFSTMCLEGTVQGLVVNTGDRTIIGRIASLASGVENEKTPIAIEIE 300
Query: 542 XXXXXXTGVAVFLGVSFFILSLILEYTWLEAVIFLIGIIVANVPEGXXXXXXXXXXXXXK 721
G+A+ G +FFI+++ + YT+L A++F + I+VA VPEG K
Sbjct: 301 HFVDIIAGLAILFGATFFIVAMCIGYTFLRAMVFFMAIVVAYVPEGLLATVTVCLSLTAK 360
Query: 722 RMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGV 901
R+A KNC+VKNLEAVETLGSTS ICSDKTGTLTQNRMTV+H+WFDN IH ADTTE+QSG
Sbjct: 361 RLASKNCVVKNLEAVETLGSTSVICSDKTGTLTQNRMTVSHLWFDNHIHTADTTEDQSGQ 420
Query: 902 SFDKTSATWLALSRIAGLCNRAVFQANQENLPILKRAVAGDASESALLKCIELCCGSVKE 1081
+FD++S TW AL R+ LCNRA F++ Q+ +P+ KR V GDASE+ALLK EL G+
Sbjct: 421 TFDQSSETWRALCRVLTLCNRAAFKSGQDAVPVPKRIVIGDASETALLKFSELTLGNAMG 480
Query: 1082 MRERYTKIVEIPFNSTNKYQLSIHKNPNTAEPRHLLVMKGAPEKDPGRCSSILIHGKGQP 1261
R+R+ K+ EIPFNSTNK+QLSIH + +PRHLLVMKGAPE+ RCSSILI G+ P
Sbjct: 481 YRDRFPKVCEIPFNSTNKFQLSIHTLEDPRDPRHLLVMKGAPERVLERCSSILIKGQELP 540
Query: 1262 LDEELKDAFQNAYLELGGPGKRVLGFCHFFLPDKQVPRSFQFDTDHVKFPLENLCLRGLI 1441
LDE+ ++AFQ AYL LGG G+RVLGFC +L +K P + FD + + FP LC GL+
Sbjct: 541 LDEQWREAFQTAYLSLGGLGERVLGFCQLYLNEKDYPPGYAFDVEAMNFPSSGLCFAGLV 600
Query: 1442 SMNDPPRAXVPDAV 1483
SM DPPRA VPDAV
Sbjct: 601 SMIDPPRATVPDAV 614
>ref|NP_001667.4| potassium-transporting ATPase alpha chain 2 isoform 2 [Homo sapiens].
Length = 1039
Score = 597 bits (1539), Expect = e-171
Identities = 294/494 (59%), Positives = 376/494 (76%)
Frame = +2
Query: 2 LCFLAYGIQAATEEEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQA 181
LC++AYGIQ ++++ +N+YLG VL VVI+TG F+YYQEAKS+ IM SF M+PQQA
Sbjct: 125 LCWIAYGIQYSSDKSASLNNVYLGCVLGLVVILTGIFAYYQEAKSTNIMSSFNKMIPQQA 184
Query: 182 LVIRNGEKMSINAEEVVVGDLVEVKGGDRIPADLRIISANGCKVDNSSLTGESEPQTRSP 361
LVIR+ EK +I +E++VVGD+VEVKGGD+IPAD+R++S+ GC+VDNSSLTGESEPQ RS
Sbjct: 185 LVIRDSEKKTIPSEQLVVGDIVEVKGGDQIPADIRVLSSQGCRVDNSSLTGESEPQPRSS 244
Query: 362 DFTNENPLETRNIAFFSTNCVEGTARGIVVYTGDRTVMGRIATLASGLEGGQTPXXXXXX 541
+FT+ENPLET+NI F+ST C+EGT G+V+ TGDRT++G IA+LASG+ +TP
Sbjct: 245 EFTHENPLETKNICFYSTTCLEGTVTGMVINTGDRTIIGHIASLASGVGNEKTPIAIEIE 304
Query: 542 XXXXXXTGVAVFLGVSFFILSLILEYTWLEAVIFLIGIIVANVPEGXXXXXXXXXXXXXK 721
GVAV +G+ FFI+++ L+Y L+++IFLIGIIVANVPEG K
Sbjct: 305 HFVHIVAGVAVSIGILFFIIAVSLKYQVLDSIIFLIGIIVANVPEGLLATVTVTLSLTAK 364
Query: 722 RMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGV 901
RMA+KNCLVKNLEAVETLGSTS ICSDKTGTLTQNRMTVAH+WFDNQI ADT+E+ S
Sbjct: 365 RMAKKNCLVKNLEAVETLGSTSIICSDKTGTLTQNRMTVAHLWFDNQIFVADTSEDHSNQ 424
Query: 902 SFDKTSATWLALSRIAGLCNRAVFQANQENLPILKRAVAGDASESALLKCIELCCGSVKE 1081
FD++S TW +LS+I LCNRA F+ QEN+PI+K+AV GDASE+ALLK E+ G V E
Sbjct: 425 VFDQSSRTWASLSKIITLCNRAEFKPGQENVPIMKKAVIGDASETALLKFSEVILGDVME 484
Query: 1082 MRERYTKIVEIPFNSTNKYQLSIHKNPNTAEPRHLLVMKGAPEKDPGRCSSILIHGKGQP 1261
+R+R K+ EIPFNSTNK+QLSIH+ + R L+VMKGAPE+ +CS+I+I+G+ P
Sbjct: 485 IRKRNRKVAEIPFNSTNKFQLSIHEMDDPHGKRFLMVMKGAPERILEKCSTIMINGEEHP 544
Query: 1262 LDEELKDAFQNAYLELGGPGKRVLGFCHFFLPDKQVPRSFQFDTDHVKFPLENLCLRGLI 1441
LD+ F AY+ELGG G+RVLGFCH +LP + P ++ FD D + FP NLC GL+
Sbjct: 545 LDKSTAKTFHTAYMELGGLGERVLGFCHLYLPADEFPETYSFDIDAMNFPTSNLCFVGLL 604
Query: 1442 SMNDPPRAXVPDAV 1483
SM DPPR+ VPDAV
Sbjct: 605 SMIDPPRSTVPDAV 618
>ref|NP_001172014.1| potassium-transporting ATPase alpha chain 2 isoform 1 [Homo sapiens].
Length = 1045
Score = 590 bits (1522), Expect = e-169
Identities = 294/500 (58%), Positives = 376/500 (75%), Gaps = 6/500 (1%)
Frame = +2
Query: 2 LCFLAYGIQAATEEEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQA 181
LC++AYGIQ ++++ +N+YLG VL VVI+TG F+YYQEAKS+ IM SF M+PQQA
Sbjct: 125 LCWIAYGIQYSSDKSASLNNVYLGCVLGLVVILTGIFAYYQEAKSTNIMSSFNKMIPQQA 184
Query: 182 LVIRNGEKMSINAEEVVVGDLVEVKGGDRIPADLRIISANGCKVDNSSLTGESEPQTRSP 361
LVIR+ EK +I +E++VVGD+VEVKGGD+IPAD+R++S+ GC+VDNSSLTGESEPQ RS
Sbjct: 185 LVIRDSEKKTIPSEQLVVGDIVEVKGGDQIPADIRVLSSQGCRVDNSSLTGESEPQPRSS 244
Query: 362 DFTNENPLETRNIAFFSTNCVE------GTARGIVVYTGDRTVMGRIATLASGLEGGQTP 523
+FT+ENPLET+NI F+ST C+E GT G+V+ TGDRT++G IA+LASG+ +TP
Sbjct: 245 EFTHENPLETKNICFYSTTCLEASTSPVGTVTGMVINTGDRTIIGHIASLASGVGNEKTP 304
Query: 524 XXXXXXXXXXXXTGVAVFLGVSFFILSLILEYTWLEAVIFLIGIIVANVPEGXXXXXXXX 703
GVAV +G+ FFI+++ L+Y L+++IFLIGIIVANVPEG
Sbjct: 305 IAIEIEHFVHIVAGVAVSIGILFFIIAVSLKYQVLDSIIFLIGIIVANVPEGLLATVTVT 364
Query: 704 XXXXXKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTT 883
KRMA+KNCLVKNLEAVETLGSTS ICSDKTGTLTQNRMTVAH+WFDNQI ADT+
Sbjct: 365 LSLTAKRMAKKNCLVKNLEAVETLGSTSIICSDKTGTLTQNRMTVAHLWFDNQIFVADTS 424
Query: 884 ENQSGVSFDKTSATWLALSRIAGLCNRAVFQANQENLPILKRAVAGDASESALLKCIELC 1063
E+ S FD++S TW +LS+I LCNRA F+ QEN+PI+K+AV GDASE+ALLK E+
Sbjct: 425 EDHSNQVFDQSSRTWASLSKIITLCNRAEFKPGQENVPIMKKAVIGDASETALLKFSEVI 484
Query: 1064 CGSVKEMRERYTKIVEIPFNSTNKYQLSIHKNPNTAEPRHLLVMKGAPEKDPGRCSSILI 1243
G V E+R+R K+ EIPFNSTNK+QLSIH+ + R L+VMKGAPE+ +CS+I+I
Sbjct: 485 LGDVMEIRKRNRKVAEIPFNSTNKFQLSIHEMDDPHGKRFLMVMKGAPERILEKCSTIMI 544
Query: 1244 HGKGQPLDEELKDAFQNAYLELGGPGKRVLGFCHFFLPDKQVPRSFQFDTDHVKFPLENL 1423
+G+ PLD+ F AY+ELGG G+RVLGFCH +LP + P ++ FD D + FP NL
Sbjct: 545 NGEEHPLDKSTAKTFHTAYMELGGLGERVLGFCHLYLPADEFPETYSFDIDAMNFPTSNL 604
Query: 1424 CLRGLISMNDPPRAXVPDAV 1483
C GL+SM DPPR+ VPDAV
Sbjct: 605 CFVGLLSMIDPPRSTVPDAV 624
>ref|NP_001186108.1| calcium-transporting ATPase type 2C member 1 isoform 1a [Homo
sapiens].
Length = 919
Score = 175 bits (443), Expect = 1e-43
Identities = 136/485 (28%), Positives = 217/485 (44%), Gaps = 15/485 (3%)
Frame = +2
Query: 74 VVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQALVIRNGEKMSINAEEVVVGDLVEV 253
V ++ ++I ++ QE +S K +E +VP + +R G+ A ++V GD V +
Sbjct: 104 VSITVAILIVVTVAFVQEYRSEKSLEELSKLVPPECHCVREGKLEHTLARDLVPGDTVCL 163
Query: 254 KGGDRIPADLRIISANGCKVDNSSLTGESEPQTR----SPDFTNENPLETRNIAFFSTNC 421
GDR+PADLR+ A +D SSLTGE+ P ++ P TN + NIAF T
Sbjct: 164 SVGDRVPADLRLFEAVDLSIDESSLTGETTPCSKVTAPQPAATNGDLASRSNIAFMGTLV 223
Query: 422 VEGTARGIVVYTGDRTVMGRIATLASGLEGGQTPXXXXXXXXXXXXTGVAVFLGVSFFIL 601
G A+G+V+ TG+ + G + + E +TP + SF I+
Sbjct: 224 RCGKAKGVVIGTGENSEFGEVFKMMQAEEAPKTPLQKSMDLLGKQLSFY------SFGII 277
Query: 602 SLILEYTWL------EAVIFLIGIIVANVPEGXXXXXXXXXXXXXKRMARKNCLVKNLEA 763
+I+ WL E + + VA +PEG RM +K +VK L
Sbjct: 278 GIIMLVGWLLGKDILEMFTISVSLAVAAIPEGLPIVVTVTLALGVMRMVKKRAIVKKLPI 337
Query: 764 VETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGVSFDKTSATWLALSR 943
VETLG + ICSDKTGTLT+N MTV H++ + +H T GV +++ +
Sbjct: 338 VETLGCCNVICSDKTGTLTKNEMTVTHIFTSDGLHAEVT-----GVGYNQFGEVIVDGDV 392
Query: 944 IAGLCNRAVFQANQ-----ENLPILKRAVAGDASESALLKCIELCCGSVKEMRERYTKIV 1108
+ G N AV + + + I + G +E AL+ + + G + +++ Y +
Sbjct: 393 VHGFYNPAVSRIVEAGCVCNDAVIRNNTLMGKPTEGALI-ALAMKMG-LDGLQQDYIRKA 450
Query: 1109 EIPFNSTNKYQLSIHKNPNTAEPRHLLVMKGAPEKDPGRCSSILIHGKGQPLDEELKDAF 1288
E PF+S K+ + + + MKGA E+ C++ G+ L ++ +D +
Sbjct: 451 EYPFSSEQKWMAVKCVHRTQQDRPEICFMKGAYEQVIKYCTTYQSKGQTLTLTQQQRDVY 510
Query: 1289 QNAYLELGGPGKRVLGFCHFFLPDKQVPRSFQFDTDHVKFPLENLCLRGLISMNDPPRAX 1468
Q +G G RVL P+ L L GL+ + DPPR
Sbjct: 511 QQEKARMGSAGLRVLALASG--PE-----------------LGQLTFLGLVGIIDPPRTG 551
Query: 1469 VPDAV 1483
V +AV
Sbjct: 552 VKEAV 556
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 59,983,417
Number of extensions: 1695165
Number of successful extensions: 6209
Number of sequences better than 1.0e-05: 45
Number of HSP's gapped: 6091
Number of HSP's successfully gapped: 53
Length of query: 494
Length of database: 18,297,164
Length adjustment: 107
Effective length of query: 387
Effective length of database: 14,770,016
Effective search space: 5715996192
Effective search space used: 5715996192
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-001369
(1484 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_659149.1| sodium/potassium-transporting ATPase subunit al... 859 0.0
Alignment gi|NP_659170.1| sodium/potassium-transporting ATPase subunit al... 768 0.0
Alignment gi|NP_848492.1| sodium/potassium-transporting ATPase subunit al... 754 0.0
Alignment gi|NP_038762.1| sodium/potassium-transporting ATPase subunit al... 660 0.0
Alignment gi|NP_061201.2| potassium-transporting ATPase alpha chain 1 [Mu... 607 e-173
Alignment gi|NP_619593.2| potassium-transporting ATPase alpha chain 2 [Mu... 596 e-170
Alignment gi|NP_081198.1| calcium-transporting ATPase type 2C member 2 [M... 179 4e-45
Alignment gi|NP_778190.3| calcium-transporting ATPase type 2C member 1 [M... 171 1e-42
Alignment gi|NP_001156809.1| sarcoplasmic/endoplasmic reticulum calcium A... 162 5e-40
Alignment gi|NP_001156808.1| sarcoplasmic/endoplasmic reticulum calcium A... 162 5e-40
>ref|NP_659149.1| sodium/potassium-transporting ATPase subunit alpha-1 precursor [Mus
musculus].
Length = 1023
Score = 859 bits (2219), Expect = 0.0
Identities = 434/494 (87%), Positives = 449/494 (90%)
Frame = +2
Query: 2 LCFLAYGIQAATEEEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQA 181
LCFLAYGI++ATEEEP ND+LYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQA
Sbjct: 110 LCFLAYGIRSATEEEPPNDDLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQA 169
Query: 182 LVIRNGEKMSINAEEVVVGDLVEVKGGDRIPADLRIISANGCKVDNSSLTGESEPQTRSP 361
LVIRNGEKMSINAE+VVVGDLVEVKGGDRIPADLRIISANGCKVDNSSLTGESEPQTRSP
Sbjct: 170 LVIRNGEKMSINAEDVVVGDLVEVKGGDRIPADLRIISANGCKVDNSSLTGESEPQTRSP 229
Query: 362 DFTNENPLETRNIAFFSTNCVEGTARGIVVYTGDRTVMGRIATLASGLEGGQTPXXXXXX 541
DFTNENPLETRNIAFFSTNCVEGTARGIVVYTGDRTVMGRIATLASGLEGGQTP
Sbjct: 230 DFTNENPLETRNIAFFSTNCVEGTARGIVVYTGDRTVMGRIATLASGLEGGQTPIAEEIE 289
Query: 542 XXXXXXTGVAVFLGVSFFILSLILEYTWLEAVIFLIGIIVANVPEGXXXXXXXXXXXXXK 721
TGVAVFLGVSFFILSLILEYTWLEAVIFLIGIIVANVPEG K
Sbjct: 290 HFIHLITGVAVFLGVSFFILSLILEYTWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAK 349
Query: 722 RMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGV 901
RMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGV
Sbjct: 350 RMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGV 409
Query: 902 SFDKTSATWLALSRIAGLCNRAVFQANQENLPILKRAVAGDASESALLKCIELCCGSVKE 1081
SFDKTSATW ALSRIAGLCNRAVFQANQENLPILKRAVAGDASESALLKCIE+CCGSV E
Sbjct: 410 SFDKTSATWFALSRIAGLCNRAVFQANQENLPILKRAVAGDASESALLKCIEVCCGSVME 469
Query: 1082 MRERYTKIVEIPFNSTNKYQLSIHKNPNTAEPRHLLVMKGAPEKDPGRCSSILIHGKGQP 1261
MRE+Y+KIVEIPFNSTNKYQLSIHKNPN +EP+HLLVMKGAPE+ RCSSIL+HGK QP
Sbjct: 470 MREKYSKIVEIPFNSTNKYQLSIHKNPNASEPKHLLVMKGAPERILDRCSSILLHGKEQP 529
Query: 1262 LDEELKDAFQNAYLELGGPGKRVLGFCHFFLPDKQVPRSFQFDTDHVKFPLENLCLRGLI 1441
LDEELKDAFQNAYLELGG G+RVLGFCH LPD+Q P FQFDTD V FP++NLC GLI
Sbjct: 530 LDEELKDAFQNAYLELGGLGERVLGFCHLLLPDEQFPEGFQFDTDDVNFPVDNLCFVGLI 589
Query: 1442 SMNDPPRAXVPDAV 1483
SM DPPRA VPDAV
Sbjct: 590 SMIDPPRAAVPDAV 603
>ref|NP_659170.1| sodium/potassium-transporting ATPase subunit alpha-3 [Mus musculus].
Length = 1053
Score = 768 bits (1983), Expect = 0.0
Identities = 386/494 (78%), Positives = 424/494 (85%)
Frame = +2
Query: 2 LCFLAYGIQAATEEEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQA 181
LCFLAYGIQA TE++P DNLYLG+VL+AVVIITGCFSYYQEAKSSKIMESFKNMVPQQA
Sbjct: 100 LCFLAYGIQAGTEDDPSGDNLYLGIVLAAVVIITGCFSYYQEAKSSKIMESFKNMVPQQA 159
Query: 182 LVIRNGEKMSINAEEVVVGDLVEVKGGDRIPADLRIISANGCKVDNSSLTGESEPQTRSP 361
LVIR GEKM +NAEEVVVGDLVE+KGGDR+PADLRIISA+GCKVDNSSLTGESEPQTRSP
Sbjct: 160 LVIREGEKMQVNAEEVVVGDLVEIKGGDRVPADLRIISAHGCKVDNSSLTGESEPQTRSP 219
Query: 362 DFTNENPLETRNIAFFSTNCVEGTARGIVVYTGDRTVMGRIATLASGLEGGQTPXXXXXX 541
D T++NPLETRNI FFSTNCVEGTARG+VV TGDRTVMGRIATLASGLE G+TP
Sbjct: 220 DCTHDNPLETRNITFFSTNCVEGTARGVVVATGDRTVMGRIATLASGLEVGKTPIAIEIE 279
Query: 542 XXXXXXTGVAVFLGVSFFILSLILEYTWLEAVIFLIGIIVANVPEGXXXXXXXXXXXXXK 721
TGVAVFLGVSFFILSLIL YTWLEAVIFLIGIIVANVPEG K
Sbjct: 280 HFIQLITGVAVFLGVSFFILSLILGYTWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAK 339
Query: 722 RMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGV 901
RMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTE+QSG
Sbjct: 340 RMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSGT 399
Query: 902 SFDKTSATWLALSRIAGLCNRAVFQANQENLPILKRAVAGDASESALLKCIELCCGSVKE 1081
SFDK+S TW+ALS IAGLCNRAVF+ Q+N+P+LKR VAGDASESALLKCIEL GSVK
Sbjct: 400 SFDKSSHTWVALSHIAGLCNRAVFKGGQDNIPVLKRDVAGDASESALLKCIELSSGSVKL 459
Query: 1082 MRERYTKIVEIPFNSTNKYQLSIHKNPNTAEPRHLLVMKGAPEKDPGRCSSILIHGKGQP 1261
MRER K+ EIPFNSTNKYQLSIH+ + + R+LLVMKGAPE+ RC++IL+ GK QP
Sbjct: 460 MRERNKKVAEIPFNSTNKYQLSIHETEDPNDNRYLLVMKGAPERILDRCATILLQGKEQP 519
Query: 1262 LDEELKDAFQNAYLELGGPGKRVLGFCHFFLPDKQVPRSFQFDTDHVKFPLENLCLRGLI 1441
LDEE+K+AFQNAYLELGG G+RVLGFCH++LP++Q P+ F FD D V F +NLC GL+
Sbjct: 520 LDEEMKEAFQNAYLELGGLGERVLGFCHYYLPEEQFPKGFAFDCDDVNFTTDNLCFVGLM 579
Query: 1442 SMNDPPRAXVPDAV 1483
SM DPPRA VPDAV
Sbjct: 580 SMIDPPRAAVPDAV 593
>ref|NP_848492.1| sodium/potassium-transporting ATPase subunit alpha-2 precursor [Mus
musculus].
Length = 1020
Score = 754 bits (1948), Expect = 0.0
Identities = 381/494 (77%), Positives = 420/494 (85%)
Frame = +2
Query: 2 LCFLAYGIQAATEEEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQA 181
LCFLAYGI AA E+EP NDNLYLG+VL+AVVI+TGCFSYYQEAKSSKIM+SFKNMVPQQA
Sbjct: 108 LCFLAYGILAAMEDEPSNDNLYLGIVLAAVVIVTGCFSYYQEAKSSKIMDSFKNMVPQQA 167
Query: 182 LVIRNGEKMSINAEEVVVGDLVEVKGGDRIPADLRIISANGCKVDNSSLTGESEPQTRSP 361
LVIR GEKM INAEEVVVGDLVEVKGGDR+PADLRIIS++GCKVDNSSLTGESEPQTRSP
Sbjct: 168 LVIREGEKMQINAEEVVVGDLVEVKGGDRVPADLRIISSHGCKVDNSSLTGESEPQTRSP 227
Query: 362 DFTNENPLETRNIAFFSTNCVEGTARGIVVYTGDRTVMGRIATLASGLEGGQTPXXXXXX 541
+FT+ENPLETRNI FFSTNCVEGTARGIV+ TGDRTVMGRIATLASGLE GQTP
Sbjct: 228 EFTHENPLETRNICFFSTNCVEGTARGIVIATGDRTVMGRIATLASGLEVGQTPIAMEIE 287
Query: 542 XXXXXXTGVAVFLGVSFFILSLILEYTWLEAVIFLIGIIVANVPEGXXXXXXXXXXXXXK 721
TGVAVFLGVSFF+LSLIL Y+WLEAVIFLIGIIVANVPEG K
Sbjct: 288 HFIQLITGVAVFLGVSFFVLSLILGYSWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAK 347
Query: 722 RMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGV 901
RMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTE+QSG
Sbjct: 348 RMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSGA 407
Query: 902 SFDKTSATWLALSRIAGLCNRAVFQANQENLPILKRAVAGDASESALLKCIELCCGSVKE 1081
+FDK S TW ALSRIAGLCNRAVF+A QEN+ + KR AGDASESALLKCIEL CGSV++
Sbjct: 408 TFDKRSPTWTALSRIAGLCNRAVFKAGQENISVSKRDTAGDASESALLKCIELSCGSVRK 467
Query: 1082 MRERYTKIVEIPFNSTNKYQLSIHKNPNTAEPRHLLVMKGAPEKDPGRCSSILIHGKGQP 1261
MR+R K+ EIPFNSTNKYQLSIH+ ++ + H+LVMKGAPE+ RCS+IL+ GK P
Sbjct: 468 MRDRNPKVAEIPFNSTNKYQLSIHEREDSPQ-SHVLVMKGAPERILDRCSTILVQGKEIP 526
Query: 1262 LDEELKDAFQNAYLELGGPGKRVLGFCHFFLPDKQVPRSFQFDTDHVKFPLENLCLRGLI 1441
LD+E++DAFQNAY+ELGG G+RVLGFC LP + PR F+FDTD + FP E LC GL+
Sbjct: 527 LDKEMQDAFQNAYMELGGLGERVLGFCQLNLPSGKFPRGFKFDTDELNFPTEKLCFVGLM 586
Query: 1442 SMNDPPRAXVPDAV 1483
SM DPPRA VPDAV
Sbjct: 587 SMIDPPRAAVPDAV 600
>ref|NP_038762.1| sodium/potassium-transporting ATPase subunit alpha-4 [Mus musculus].
Length = 1032
Score = 660 bits (1704), Expect = 0.0
Identities = 345/496 (69%), Positives = 393/496 (79%), Gaps = 2/496 (0%)
Frame = +2
Query: 2 LCFLAYGIQAATEEEPQN-DNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQ 178
LCFLAYGI +E N DNLYLG+VLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQ
Sbjct: 119 LCFLAYGIHVNYYKENANKDNLYLGIVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQ 178
Query: 179 ALVIRNGEKMSINAEEVVVGDLVEVKGGDRIPADLRIISANGCKVDNSSLTGESEPQTRS 358
ALVIR+GEKM IN +VV+GDLVEVKGGD+IPAD+R+ISA GCKVDNSSLTGESEPQ+R
Sbjct: 179 ALVIRDGEKMQINVRDVVLGDLVEVKGGDQIPADIRVISAQGCKVDNSSLTGESEPQSRC 238
Query: 359 PDFTNENPLETRNIAFFSTNCVEGTARGIVVYTGDRTVMGRIATLASGLEGGQTPXXXXX 538
PD T+ENPLETRNI FFSTNCVEGTARGIV+ TGD TVMGRIA+L SGL+ G+TP
Sbjct: 239 PDCTHENPLETRNIIFFSTNCVEGTARGIVIATGDYTVMGRIASLTSGLQMGKTPIATEI 298
Query: 539 XXXXXXXTGVAVFLGVSFFILSLILEYTWLEAVIFLIGIIVANVPEGXXXXXXXXXXXXX 718
T VAVFLGVSFF LS+IL YTWL+AVIFLIGIIVANVPEG
Sbjct: 299 EHFIHLITAVAVFLGVSFFWLSIILGYTWLDAVIFLIGIIVANVPEGLLATVTVCLTLTA 358
Query: 719 KRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQ-S 895
KRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAH+WFD ++EADT+E Q +
Sbjct: 359 KRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHLWFDKTVYEADTSEEQTT 418
Query: 896 GVSFDKTSATWLALSRIAGLCNRAVFQANQENLPILKRAVAGDASESALLKCIELCCGSV 1075
G +F K+S TW L+RIAGLCNRA F+ +QE++PI KRA GDASESALLK IE V
Sbjct: 419 GKTFPKSSDTWFYLARIAGLCNRADFKPHQESVPIAKRATTGDASESALLKFIEQSYNPV 478
Query: 1076 KEMRERYTKIVEIPFNSTNKYQLSIHKNPNTAEPRHLLVMKGAPEKDPGRCSSILIHGKG 1255
EMR++ K+ EIPFNSTNKYQ+SIH + +E H+L+MKGAPE+ CSS L++G+
Sbjct: 479 SEMRQKNPKVAEIPFNSTNKYQMSIHLLEDNSE-AHVLLMKGAPERIFDFCSSFLLNGQE 537
Query: 1256 QPLDEELKDAFQNAYLELGGPGKRVLGFCHFFLPDKQVPRSFQFDTDHVKFPLENLCLRG 1435
P+DEE+K FQNAY+ELGG G+RVLGFC LP + FQF+TD + FP+ENLC G
Sbjct: 538 YPMDEEMKMDFQNAYIELGGLGERVLGFCFLNLP-SNFSKGFQFNTDELNFPMENLCFAG 596
Query: 1436 LISMNDPPRAXVPDAV 1483
LISM DPPR VPDAV
Sbjct: 597 LISMIDPPRTAVPDAV 612
>ref|NP_061201.2| potassium-transporting ATPase alpha chain 1 [Mus musculus].
Length = 1025
Score = 607 bits (1564), Expect = e-173
Identities = 297/494 (60%), Positives = 375/494 (75%)
Frame = +2
Query: 2 LCFLAYGIQAATEEEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQA 181
+C +A+ IQA+ + +DNLYL V L AVV++TGCF YYQE KS+ I+ SFKN+VPQQA
Sbjct: 120 ICLIAFAIQASEGDLTTDDNLYLAVALIAVVVVTGCFGYYQEFKSTNIIASFKNLVPQQA 179
Query: 182 LVIRNGEKMSINAEEVVVGDLVEVKGGDRIPADLRIISANGCKVDNSSLTGESEPQTRSP 361
VIR+G+K INA+++VVGDLVE+KGGDR+PAD+RI+SA GCKVDNSSLTGESEPQTRSP
Sbjct: 180 TVIRDGDKFQINADQLVVGDLVEMKGGDRVPADIRILSAQGCKVDNSSLTGESEPQTRSP 239
Query: 362 DFTNENPLETRNIAFFSTNCVEGTARGIVVYTGDRTVMGRIATLASGLEGGQTPXXXXXX 541
+ T+E+PLETRNIAFFST C+EGTA+G+VV TGDRT++GRIA+LASG+E +TP
Sbjct: 240 ECTHESPLETRNIAFFSTMCLEGTAQGLVVSTGDRTIIGRIASLASGVENEKTPIAIEIE 299
Query: 542 XXXXXXTGVAVFLGVSFFILSLILEYTWLEAVIFLIGIIVANVPEGXXXXXXXXXXXXXK 721
G+A+ G +FF++++ + YT+L A++F + I+VA VPEG K
Sbjct: 300 HFVDIIAGLAILFGATFFVVAMCIGYTFLRAMVFFMAIVVAYVPEGLLATVTVCLSLTAK 359
Query: 722 RMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGV 901
R+A KNC+VKNLEAVETLGSTS ICSDKTGTLTQNRMTV+H+WFDN IH ADTTE+QSG
Sbjct: 360 RLASKNCVVKNLEAVETLGSTSVICSDKTGTLTQNRMTVSHLWFDNHIHTADTTEDQSGQ 419
Query: 902 SFDKTSATWLALSRIAGLCNRAVFQANQENLPILKRAVAGDASESALLKCIELCCGSVKE 1081
+FD++S TW AL R+ LCNRA F++ Q+ +P+ KR V GDASE+ALLK EL G+
Sbjct: 420 TFDQSSETWRALCRVLTLCNRAAFKSGQDAVPVPKRIVIGDASETALLKFSELTLGNAMG 479
Query: 1082 MRERYTKIVEIPFNSTNKYQLSIHKNPNTAEPRHLLVMKGAPEKDPGRCSSILIHGKGQP 1261
R+R+ K+ EIPFNS NK+QLSIH + + RHLLVMKGAPE+ RCSSILI G+ P
Sbjct: 480 YRDRFPKVCEIPFNSINKFQLSIHTLEDPRDSRHLLVMKGAPERVLERCSSILIKGQELP 539
Query: 1262 LDEELKDAFQNAYLELGGPGKRVLGFCHFFLPDKQVPRSFQFDTDHVKFPLENLCLRGLI 1441
LDE+ ++AFQ AYL LGG G+RVLGFC +L +K P + FD + + FP LC GL+
Sbjct: 540 LDEQWREAFQTAYLSLGGLGERVLGFCQLYLNEKDYPPGYAFDVEAMNFPSSGLCFAGLV 599
Query: 1442 SMNDPPRAXVPDAV 1483
SM DPPRA VPDAV
Sbjct: 600 SMIDPPRATVPDAV 613
>ref|NP_619593.2| potassium-transporting ATPase alpha chain 2 [Mus musculus].
Length = 1035
Score = 596 bits (1536), Expect = e-170
Identities = 298/494 (60%), Positives = 375/494 (75%)
Frame = +2
Query: 2 LCFLAYGIQAATEEEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQA 181
LC++AY IQ + DN+YLG +L VVI+TG F+YYQEAKS+ IM SF M+PQQA
Sbjct: 122 LCWIAYVIQYVSSTASL-DNVYLGAILVLVVILTGIFAYYQEAKSTNIMASFSKMIPQQA 180
Query: 182 LVIRNGEKMSINAEEVVVGDLVEVKGGDRIPADLRIISANGCKVDNSSLTGESEPQTRSP 361
LVIR+ EK I AE++VVGD+VE+KGGD+IPAD+R++ + GCKVDNSSLTGESEPQ RS
Sbjct: 181 LVIRDAEKKIIPAEQLVVGDVVEIKGGDQIPADIRLVFSQGCKVDNSSLTGESEPQARST 240
Query: 362 DFTNENPLETRNIAFFSTNCVEGTARGIVVYTGDRTVMGRIATLASGLEGGQTPXXXXXX 541
+FT+ENPLET+NI F+ST C+EGTA GIV+ TGDRT++GRIA+LASG+ +TP
Sbjct: 241 EFTHENPLETKNIGFYSTTCLEGTATGIVINTGDRTIIGRIASLASGVGSEKTPIAIEIE 300
Query: 542 XXXXXXTGVAVFLGVSFFILSLILEYTWLEAVIFLIGIIVANVPEGXXXXXXXXXXXXXK 721
VAV +GV FFI ++ ++Y L+A+IFLI IIVANVPEG K
Sbjct: 301 HFVHIVAAVAVSVGVIFFITAVCMKYYVLDAIIFLISIIVANVPEGLLATVTVTLSLTAK 360
Query: 722 RMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGV 901
RMA+KNCLVKNLEAVETLGSTS ICSDKTGTLTQNRMTVAH+WFDNQI ADT+ENQ+
Sbjct: 361 RMAKKNCLVKNLEAVETLGSTSIICSDKTGTLTQNRMTVAHLWFDNQIFVADTSENQTKQ 420
Query: 902 SFDKTSATWLALSRIAGLCNRAVFQANQENLPILKRAVAGDASESALLKCIELCCGSVKE 1081
+FD++S TW +LS+I LCNRA F+ QE++PI+KR V GDASE+ALLK E+ G V +
Sbjct: 421 AFDQSSGTWASLSKIITLCNRAEFRPGQESVPIMKRVVVGDASETALLKFSEVILGDVMD 480
Query: 1082 MRERYTKIVEIPFNSTNKYQLSIHKNPNTAEPRHLLVMKGAPEKDPGRCSSILIHGKGQP 1261
+R+R K+ EIPFNSTNK+QLSIH+ + + R L+VMKGAPE+ +CS+I+I+G+ QP
Sbjct: 481 IRKRNHKVAEIPFNSTNKFQLSIHETEDPNDKRFLMVMKGAPERILEKCSTIMINGQEQP 540
Query: 1262 LDEELKDAFQNAYLELGGPGKRVLGFCHFFLPDKQVPRSFQFDTDHVKFPLENLCLRGLI 1441
LD+ DAF AY+ELGG G+RVLGFCH +LP + P+S+ FD D + FP NLC GL+
Sbjct: 541 LDKSSADAFHTAYMELGGLGERVLGFCHLYLPADKFPQSYTFDVDSINFPTSNLCFVGLL 600
Query: 1442 SMNDPPRAXVPDAV 1483
SM DPPR+ VPDAV
Sbjct: 601 SMIDPPRSTVPDAV 614
>ref|NP_081198.1| calcium-transporting ATPase type 2C member 2 [Mus musculus].
Length = 944
Score = 179 bits (455), Expect = 4e-45
Identities = 147/488 (30%), Positives = 224/488 (45%), Gaps = 16/488 (3%)
Frame = +2
Query: 68 LGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQALVIRNGEKMSINAEEVVVGDLV 247
+ + L+ ++++T + QE +S K +E +VP + +R+G+ + A ++V GD+V
Sbjct: 133 VSIALAVLIVVT--VGFIQEYRSEKSLEELTKLVPPECNCLRDGKLRHMLARDLVPGDIV 190
Query: 248 EVKGGDRIPADLRIISANGCKVDNSSLTGESEP--QTRSPDFTNENPLETRNIAFFSTNC 421
+ GDRIPAD+R+ VD SS TGE EP +T SP + N+ F T
Sbjct: 191 SLSMGDRIPADIRLTEVTDLLVDESSFTGEVEPCGKTDSPLADGGDLSTLSNVVFMGTLV 250
Query: 422 VEGTARGIVVYTGDRTVMGRIATLASGLEGGQTPXXXXXXXXXXXXTGVAVFLGVSFFIL 601
G +G+V+ TG+++ G + + E +TP T +F SF I+
Sbjct: 251 QCGKGQGVVIGTGEQSQFGEVFKMMRAEETPKTPLQKSMDKLGKQLT---IF---SFGII 304
Query: 602 SLILEYTWLEAVIFL------IGIIVANVPEGXXXXXXXXXXXXXKRMARKNCLVKNLEA 763
L++ W++ FL + + VA +PEG RMA+K +VK L
Sbjct: 305 GLLMLVGWVQGKPFLSMFTVGVSLAVAAIPEGLPIVVMVTLVLGVLRMAKKRVIVKKLPI 364
Query: 764 VETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGVSFDKTSATWLALSR 943
VETLG + ICSDKTGTLT N MT + + H SGV + L S+
Sbjct: 365 VETLGCCNVICSDKTGTLTANEMTATQLVTSDGFH-----AEVSGVGYSGEGTVCLLPSK 419
Query: 944 --IAGLCNRAVFQANQ-----ENLPILKRAVAGDASESAL-LKCIELCCGSVKEMRERYT 1099
I G N +V + + N I K AV G +E AL + +++ GS+K + Y
Sbjct: 420 EVIKGFDNVSVGKLVEAGCVANNAVIRKNAVMGQPTEGALVVLAMKMNLGSIK---DSYV 476
Query: 1100 KIVEIPFNSTNKYQLSIHKNPNTAEPRHLLVMKGAPEKDPGRCSSILIHGKGQPLDEELK 1279
+ EIPF+S K+ +++ P + + + MKGA E+ CS G PL + K
Sbjct: 477 RKKEIPFSSEQKW-MAVRCGPKSEDGEDIYFMKGAFEEVIHHCSMYNNGGIPLPLTPQQK 535
Query: 1280 DAFQNAYLELGGPGKRVLGFCHFFLPDKQVPRSFQFDTDHVKFPLENLCLRGLISMNDPP 1459
Q ++G G RVL P+ L L GL+ + DPP
Sbjct: 536 SYCQQEEKKMGSLGLRVLALASG--PE-----------------LGRLTFLGLVGIIDPP 576
Query: 1460 RAXVPDAV 1483
RA V +AV
Sbjct: 577 RAGVKEAV 584
>ref|NP_778190.3| calcium-transporting ATPase type 2C member 1 [Mus musculus].
Length = 918
Score = 171 bits (434), Expect = 1e-42
Identities = 138/484 (28%), Positives = 216/484 (44%), Gaps = 14/484 (2%)
Frame = +2
Query: 74 VVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQALVIRNGEKMSINAEEVVVGDLVEV 253
V ++ ++I ++ QE +S K +E +VP + +R G+ A ++V GD V +
Sbjct: 104 VSITVAIVIVVTVAFVQEYRSEKSLEELSKLVPPECHCVREGKLEHTLARDLVPGDTVCL 163
Query: 254 KGGDRIPADLRIISANGCKVDNSSLTGESEP--QTRSPDFTNENPLETR-NIAFFSTNCV 424
GDR+PADLR+ A VD SSLTGE+ P + +P L +R NIAF T
Sbjct: 164 SVGDRVPADLRLFEAVDLSVDESSLTGETAPCSKVTAPQPAANGDLASRSNIAFMGTLVR 223
Query: 425 EGTARGIVVYTGDRTVMGRIATLASGLEGGQTPXXXXXXXXXXXXTGVAVFLGVSFFILS 604
G A+GIV+ TG+ + G + + E +TP + SF I+
Sbjct: 224 CGKAKGIVIGTGENSEFGEVFKMMQAEEAPKTPLQKSMDLLGKQLS------FYSFGIIG 277
Query: 605 LILEYTW------LEAVIFLIGIIVANVPEGXXXXXXXXXXXXXKRMARKNCLVKNLEAV 766
+I+ W LE + + VA +PEG RM +K +VK L V
Sbjct: 278 IIMLVGWLLGKDILEMFTISVSLAVAAIPEGLPIVVTVTLALGVMRMVKKRAIVKKLPIV 337
Query: 767 ETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGVSFDKTSATWLALSRI 946
ETLG + ICSDKTGTLT+N MTV H+ + +H T GV +++ + +
Sbjct: 338 ETLGCCNVICSDKTGTLTKNEMTVTHILTSDGLHAEVT-----GVGYNQFGEVIVDGDVV 392
Query: 947 AGLCNRAVFQANQ-----ENLPILKRAVAGDASESALLKCIELCCGSVKEMRERYTKIVE 1111
G N AV + + + I + G +E AL+ + + G + +++ Y + E
Sbjct: 393 HGFYNPAVSRIVEAGCVCNDAVIRNNTLMGKPTEGALI-ALAMKMG-LDGLQQDYIRKAE 450
Query: 1112 IPFNSTNKYQLSIHKNPNTAEPRHLLVMKGAPEKDPGRCSSILIHGKGQPLDEELKDAFQ 1291
PF+S K+ + + + MKGA E+ C++ G+ L ++ +D +Q
Sbjct: 451 YPFSSEQKWMAVKCVHRTQQDRPEICFMKGAYEQVIKYCTTYNSKGQTLALTQQQRDLYQ 510
Query: 1292 NAYLELGGPGKRVLGFCHFFLPDKQVPRSFQFDTDHVKFPLENLCLRGLISMNDPPRAXV 1471
+G G RVL P+ L L GL+ + DPPR V
Sbjct: 511 QEKARMGSAGLRVLALASG--PE-----------------LGQLTFLGLVGIIDPPRTGV 551
Query: 1472 PDAV 1483
+AV
Sbjct: 552 KEAV 555
>ref|NP_001156809.1| sarcoplasmic/endoplasmic reticulum calcium ATPase 3 isoform c [Mus
musculus].
Length = 1026
Score = 162 bits (411), Expect = 5e-40
Identities = 146/534 (27%), Positives = 232/534 (43%), Gaps = 68/534 (12%)
Frame = +2
Query: 74 VVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQALVIRNGEK--MSINAEEVVVGDLV 247
+V+ +++ +QE + +E+ K P+ VIR+ K I A ++V GD+V
Sbjct: 92 LVIMLILVANAIVGVWQERNAESAIEALKEYEPEMGKVIRSDRKGVQRIRARDIVPGDIV 151
Query: 248 EVKGGDRIPADLRIISANGC--KVDNSSLTGESEPQTRSPDFTNENPL---ETRNIAFFS 412
EV GD++PADLR+I +VD S LTGES T+ D + + +N+ F
Sbjct: 152 EVAVGDKVPADLRLIEIKSTTLRVDQSILTGESVSVTKHTDAIPDPRAVNQDKKNMLFSG 211
Query: 413 TNCVEGTARGIVVYTGDRTVMGRIATLASGLEGGQTPXXXXXXXXXXXXTGVAVFLGVSF 592
TN G A G+ V TG +T +G+I + + +E +TP + + V+
Sbjct: 212 TNIASGKALGVAVATGLQTELGKIRSQMAAVEPERTPLQRKLDEFGRQLSHAISVICVAV 271
Query: 593 FILSL------ILEYTWLEAVIFL----IGIIVANVPEGXXXXXXXXXXXXXKRMARKNC 742
+++++ +WL ++ + + VA +PEG +RMARKN
Sbjct: 272 WVINIGHFADPAHGGSWLRGAVYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMARKNA 331
Query: 743 LVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWF-------DNQIHE---ADTTENQ 892
+V++L +VETLG TS ICSDKTGTLT N+M+V M+ ++HE + TT
Sbjct: 332 IVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCRMFVVAEAEAGTCRLHEFTISGTTYTP 391
Query: 893 SGV-----------SFDKTSATWLALSRIAGLCNRAVFQANQENLPILKRAVAGDASESA 1039
G FD + L+ I LCN + N+ K G+A+E+A
Sbjct: 392 EGEVRQGEQPVRCGQFDGL----VELATICALCNDSALDYNEAKGVYEK---VGEATETA 444
Query: 1040 LLKCIEL------------------CCGSVKEMRERYTKIVEIPFNSTNKYQLSIHKNPN 1165
L +E C SV + R +E S ++ +S++ P
Sbjct: 445 LTCLVEKMNVFDTDLKGLSRVERAGACNSVIKQLMRKEFTLEF---SRDRKSMSVYCTPT 501
Query: 1166 TAEPR---HLLVMKGAPEKDPGRCSSILIHGKGQPLDEELKDAFQNAYLELGGPGK--RV 1330
A+P+ + +KGAPE RCSS+ + + PL ++ + G R
Sbjct: 502 RADPKVQGSKMFVKGAPESVIERCSSVRVGSRTAPLSTTSREHILAKIRDWGSGSDTLRC 561
Query: 1331 LGFCHFFLPDKQ-------VPRSFQFDTDHVKFPLENLCLRGLISMNDPPRAXV 1471
L P ++ R Q++TD L G + M DPPR V
Sbjct: 562 LALATRDTPPRKEDMHLDDCSRFVQYETD--------LTFVGCVGMLDPPRPEV 607
>ref|NP_001156808.1| sarcoplasmic/endoplasmic reticulum calcium ATPase 3 isoform a [Mus
musculus].
Length = 999
Score = 162 bits (411), Expect = 5e-40
Identities = 146/534 (27%), Positives = 232/534 (43%), Gaps = 68/534 (12%)
Frame = +2
Query: 74 VVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQALVIRNGEK--MSINAEEVVVGDLV 247
+V+ +++ +QE + +E+ K P+ VIR+ K I A ++V GD+V
Sbjct: 92 LVIMLILVANAIVGVWQERNAESAIEALKEYEPEMGKVIRSDRKGVQRIRARDIVPGDIV 151
Query: 248 EVKGGDRIPADLRIISANGC--KVDNSSLTGESEPQTRSPDFTNENPL---ETRNIAFFS 412
EV GD++PADLR+I +VD S LTGES T+ D + + +N+ F
Sbjct: 152 EVAVGDKVPADLRLIEIKSTTLRVDQSILTGESVSVTKHTDAIPDPRAVNQDKKNMLFSG 211
Query: 413 TNCVEGTARGIVVYTGDRTVMGRIATLASGLEGGQTPXXXXXXXXXXXXTGVAVFLGVSF 592
TN G A G+ V TG +T +G+I + + +E +TP + + V+
Sbjct: 212 TNIASGKALGVAVATGLQTELGKIRSQMAAVEPERTPLQRKLDEFGRQLSHAISVICVAV 271
Query: 593 FILSL------ILEYTWLEAVIFL----IGIIVANVPEGXXXXXXXXXXXXXKRMARKNC 742
+++++ +WL ++ + + VA +PEG +RMARKN
Sbjct: 272 WVINIGHFADPAHGGSWLRGAVYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMARKNA 331
Query: 743 LVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWF-------DNQIHE---ADTTENQ 892
+V++L +VETLG TS ICSDKTGTLT N+M+V M+ ++HE + TT
Sbjct: 332 IVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCRMFVVAEAEAGTCRLHEFTISGTTYTP 391
Query: 893 SGV-----------SFDKTSATWLALSRIAGLCNRAVFQANQENLPILKRAVAGDASESA 1039
G FD + L+ I LCN + N+ K G+A+E+A
Sbjct: 392 EGEVRQGEQPVRCGQFDGL----VELATICALCNDSALDYNEAKGVYEK---VGEATETA 444
Query: 1040 LLKCIEL------------------CCGSVKEMRERYTKIVEIPFNSTNKYQLSIHKNPN 1165
L +E C SV + R +E S ++ +S++ P
Sbjct: 445 LTCLVEKMNVFDTDLKGLSRVERAGACNSVIKQLMRKEFTLEF---SRDRKSMSVYCTPT 501
Query: 1166 TAEPR---HLLVMKGAPEKDPGRCSSILIHGKGQPLDEELKDAFQNAYLELGGPGK--RV 1330
A+P+ + +KGAPE RCSS+ + + PL ++ + G R
Sbjct: 502 RADPKVQGSKMFVKGAPESVIERCSSVRVGSRTAPLSTTSREHILAKIRDWGSGSDTLRC 561
Query: 1331 LGFCHFFLPDKQ-------VPRSFQFDTDHVKFPLENLCLRGLISMNDPPRAXV 1471
L P ++ R Q++TD L G + M DPPR V
Sbjct: 562 LALATRDTPPRKEDMHLDDCSRFVQYETD--------LTFVGCVGMLDPPRPEV 607
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 50,747,586
Number of extensions: 1413674
Number of successful extensions: 4967
Number of sequences better than 1.0e-05: 24
Number of HSP's gapped: 4910
Number of HSP's successfully gapped: 30
Length of query: 494
Length of database: 15,617,559
Length adjustment: 105
Effective length of query: 389
Effective length of database: 12,463,779
Effective search space: 4848410031
Effective search space used: 4848410031
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-001369
(1484 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_999414.1| sodium/potassium-transporting ATPase subunit al... 880 0.0
Alignment gi|NP_001165224.1| sodium/potassium-transporting ATPase subunit... 769 0.0
Alignment gi|NP_001165012.1| sodium/potassium-transporting ATPase subunit... 757 0.0
Alignment gi|XP_001929014.1| PREDICTED: sodium/potassium-transporting ATP... 670 0.0
Alignment gi|XP_003131170.2| PREDICTED: potassium-transporting ATPase alp... 605 e-173
Alignment gi|NP_999456.1| potassium-transporting ATPase alpha chain 1 [Su... 602 e-172
Alignment gi|XP_003131169.2| PREDICTED: potassium-transporting ATPase alp... 278 4e-75
Alignment gi|XP_003127093.1| PREDICTED: potassium-transporting ATPase alp... 229 4e-60
Alignment gi|XP_003126874.1| PREDICTED: calcium-transporting ATPase type ... 182 5e-46
Alignment gi|XP_003358358.1| PREDICTED: calcium-transporting ATPase type ... 169 3e-42
>ref|NP_999414.1| sodium/potassium-transporting ATPase subunit alpha-1 precursor [Sus
scrofa].
Length = 1021
Score = 880 bits (2274), Expect = 0.0
Identities = 449/494 (90%), Positives = 453/494 (91%)
Frame = +2
Query: 2 LCFLAYGIQAATEEEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQA 181
LCFLAYGIQAATEEEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQA
Sbjct: 108 LCFLAYGIQAATEEEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQA 167
Query: 182 LVIRNGEKMSINAEEVVVGDLVEVKGGDRIPADLRIISANGCKVDNSSLTGESEPQTRSP 361
LVIRNGEKMSINAEEVVVGDLVEVKGGDRIPADLRIISANGCKVDNSSLTGESEPQTRSP
Sbjct: 168 LVIRNGEKMSINAEEVVVGDLVEVKGGDRIPADLRIISANGCKVDNSSLTGESEPQTRSP 227
Query: 362 DFTNENPLETRNIAFFSTNCVEGTARGIVVYTGDRTVMGRIATLASGLEGGQTPXXXXXX 541
DFTNENPLETRNIAFFSTNCVEGTARGIVVYTGDRTVMGRIATLASGLEGGQTP
Sbjct: 228 DFTNENPLETRNIAFFSTNCVEGTARGIVVYTGDRTVMGRIATLASGLEGGQTPIAAEIE 287
Query: 542 XXXXXXTGVAVFLGVSFFILSLILEYTWLEAVIFLIGIIVANVPEGXXXXXXXXXXXXXK 721
TGVAVFLGVSFFILSLILEYTWLEAVIFLIGIIVANVPEG K
Sbjct: 288 HFIHIITGVAVFLGVSFFILSLILEYTWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAK 347
Query: 722 RMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGV 901
RMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMW DNQIHEADTTENQSGV
Sbjct: 348 RMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWSDNQIHEADTTENQSGV 407
Query: 902 SFDKTSATWLALSRIAGLCNRAVFQANQENLPILKRAVAGDASESALLKCIELCCGSVKE 1081
SFDKTSATWLALSRIAGLCNRAVFQANQENLPILKRAVAGDASESALLKCIELCCGSVKE
Sbjct: 408 SFDKTSATWLALSRIAGLCNRAVFQANQENLPILKRAVAGDASESALLKCIELCCGSVKE 467
Query: 1082 MRERYTKIVEIPFNSTNKYQLSIHKNPNTAEPRHLLVMKGAPEKDPGRCSSILIHGKGQP 1261
MRERYTKIVEIPFNSTNKYQLSIHKNPNTAEPRHLLVMKGAPE+ RCSSILIHGK QP
Sbjct: 468 MRERYTKIVEIPFNSTNKYQLSIHKNPNTAEPRHLLVMKGAPERILDRCSSILIHGKEQP 527
Query: 1262 LDEELKDAFQNAYLELGGPGKRVLGFCHFFLPDKQVPRSFQFDTDHVKFPLENLCLRGLI 1441
LDEELKDAFQNAYLELGG G+RVLGFCH FLPD+Q P FQFDTD V FPL+NLC GLI
Sbjct: 528 LDEELKDAFQNAYLELGGLGERVLGFCHLFLPDEQFPEGFQFDTDDVNFPLDNLCFVGLI 587
Query: 1442 SMNDPPRAXVPDAV 1483
SM DPPRA VPDAV
Sbjct: 588 SMIDPPRAAVPDAV 601
>ref|NP_001165224.1| sodium/potassium-transporting ATPase subunit alpha-3 [Sus scrofa].
Length = 1014
Score = 769 bits (1986), Expect = 0.0
Identities = 387/494 (78%), Positives = 424/494 (85%)
Frame = +2
Query: 2 LCFLAYGIQAATEEEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQA 181
LCFLAYGIQA TE++P DNLYLG+VL+AVVIITGCFSYYQEAKSSKIMESFKNMVPQQA
Sbjct: 101 LCFLAYGIQAGTEDDPSGDNLYLGIVLAAVVIITGCFSYYQEAKSSKIMESFKNMVPQQA 160
Query: 182 LVIRNGEKMSINAEEVVVGDLVEVKGGDRIPADLRIISANGCKVDNSSLTGESEPQTRSP 361
LVIR GEKM +NAEEVVVGDLVE+KGGDR+PADLRIISA+GCKVDNSSLTGESEPQTRSP
Sbjct: 161 LVIREGEKMQVNAEEVVVGDLVEIKGGDRVPADLRIISAHGCKVDNSSLTGESEPQTRSP 220
Query: 362 DFTNENPLETRNIAFFSTNCVEGTARGIVVYTGDRTVMGRIATLASGLEGGQTPXXXXXX 541
D T++NPLETRNI FFSTNCVEGTARG+VV TGDRTVMGRIATLASGLE G+TP
Sbjct: 221 DCTHDNPLETRNITFFSTNCVEGTARGVVVATGDRTVMGRIATLASGLEVGKTPIAIEIE 280
Query: 542 XXXXXXTGVAVFLGVSFFILSLILEYTWLEAVIFLIGIIVANVPEGXXXXXXXXXXXXXK 721
TGVAVFLGVSFFILSLIL YTWLEAVIFLIGIIVANVPEG K
Sbjct: 281 HFIQLITGVAVFLGVSFFILSLILGYTWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAK 340
Query: 722 RMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGV 901
RMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTE+QSG
Sbjct: 341 RMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSGT 400
Query: 902 SFDKTSATWLALSRIAGLCNRAVFQANQENLPILKRAVAGDASESALLKCIELCCGSVKE 1081
SFDK+S TW+ALS IAGLCNRAVF+ Q+N+P+LKR VAGDASESALLKCIEL GSVK
Sbjct: 401 SFDKSSHTWVALSHIAGLCNRAVFKGGQDNIPVLKRDVAGDASESALLKCIELSSGSVKL 460
Query: 1082 MRERYTKIVEIPFNSTNKYQLSIHKNPNTAEPRHLLVMKGAPEKDPGRCSSILIHGKGQP 1261
MRER K+ EIPFNSTNKYQLSIH+ + + R+LLVMKGAPE+ RCS+IL+ GK QP
Sbjct: 461 MRERNKKVAEIPFNSTNKYQLSIHETEDPNDNRYLLVMKGAPERILDRCSTILLQGKEQP 520
Query: 1262 LDEELKDAFQNAYLELGGPGKRVLGFCHFFLPDKQVPRSFQFDTDHVKFPLENLCLRGLI 1441
LDEE+K+AFQNAYLELGG G+RVLGFCH++LP++Q P+ F FD D V F +NLC GL+
Sbjct: 521 LDEEMKEAFQNAYLELGGLGERVLGFCHYYLPEEQFPKGFAFDCDDVNFTTDNLCFVGLM 580
Query: 1442 SMNDPPRAXVPDAV 1483
SM DPPRA VPDAV
Sbjct: 581 SMIDPPRAAVPDAV 594
>ref|NP_001165012.1| sodium/potassium-transporting ATPase subunit alpha-2 [Sus scrofa].
Length = 1020
Score = 757 bits (1955), Expect = 0.0
Identities = 383/494 (77%), Positives = 420/494 (85%)
Frame = +2
Query: 2 LCFLAYGIQAATEEEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQA 181
LCFLAYGIQAA E+EP NDNLYLGVVL+AVVI+TGCFSYYQEAKSSKIM+SFKNMVPQQA
Sbjct: 108 LCFLAYGIQAAMEDEPSNDNLYLGVVLAAVVIVTGCFSYYQEAKSSKIMDSFKNMVPQQA 167
Query: 182 LVIRNGEKMSINAEEVVVGDLVEVKGGDRIPADLRIISANGCKVDNSSLTGESEPQTRSP 361
LV+R GEKM INAEEVVVGDLVEVKGGDR+PADLRIIS++GCKVDNSSLTGESEPQTRSP
Sbjct: 168 LVVREGEKMQINAEEVVVGDLVEVKGGDRVPADLRIISSHGCKVDNSSLTGESEPQTRSP 227
Query: 362 DFTNENPLETRNIAFFSTNCVEGTARGIVVYTGDRTVMGRIATLASGLEGGQTPXXXXXX 541
+FT+ENPLETRNI FFSTNCVEGTARGIV+ TGDRTVMGRIATLASGLE G+TP
Sbjct: 228 EFTHENPLETRNICFFSTNCVEGTARGIVIATGDRTVMGRIATLASGLEVGRTPIAMEIE 287
Query: 542 XXXXXXTGVAVFLGVSFFILSLILEYTWLEAVIFLIGIIVANVPEGXXXXXXXXXXXXXK 721
TGVAVFLGVSFF+LSLIL Y+WLEAVIFLIGIIVANVPEG K
Sbjct: 288 HFIQLITGVAVFLGVSFFVLSLILGYSWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAK 347
Query: 722 RMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGV 901
RMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTE+QSG
Sbjct: 348 RMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSGA 407
Query: 902 SFDKTSATWLALSRIAGLCNRAVFQANQENLPILKRAVAGDASESALLKCIELCCGSVKE 1081
+FDK S TW ALSRIAGLCNRAVF+A QEN+ + KR AGDASESALLKCIEL CGSV++
Sbjct: 408 TFDKRSPTWTALSRIAGLCNRAVFKAGQENISVSKRDTAGDASESALLKCIELSCGSVRK 467
Query: 1082 MRERYTKIVEIPFNSTNKYQLSIHKNPNTAEPRHLLVMKGAPEKDPGRCSSILIHGKGQP 1261
MR+R K+ EIPFNSTNKYQLSIH+ + + H+LVMKGAPE+ RCSSIL+ GK P
Sbjct: 468 MRDRNPKVAEIPFNSTNKYQLSIHEREDNPQ-SHVLVMKGAPERILDRCSSILVQGKEIP 526
Query: 1262 LDEELKDAFQNAYLELGGPGKRVLGFCHFFLPDKQVPRSFQFDTDHVKFPLENLCLRGLI 1441
LD+E++DAFQNAYLELGG G+RVLGFC LP + PR F+FDTD + FP E LC GL+
Sbjct: 527 LDKEMQDAFQNAYLELGGLGERVLGFCQLNLPSGKFPRGFKFDTDELNFPTEKLCFVGLM 586
Query: 1442 SMNDPPRAXVPDAV 1483
SM DPPRA VPDAV
Sbjct: 587 SMIDPPRAAVPDAV 600
>ref|XP_001929014.1| PREDICTED: sodium/potassium-transporting ATPase subunit alpha-4 [Sus
scrofa].
Length = 1030
Score = 670 bits (1728), Expect = 0.0
Identities = 342/494 (69%), Positives = 397/494 (80%)
Frame = +2
Query: 2 LCFLAYGIQAATEEEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQA 181
LCF+AYGIQ ++P DNLYLG+VL+ VVIITGCFSYYQEAKSSKIMESF+NMVPQ A
Sbjct: 119 LCFVAYGIQMYFHKDPTKDNLYLGIVLAVVVIITGCFSYYQEAKSSKIMESFRNMVPQHA 178
Query: 182 LVIRNGEKMSINAEEVVVGDLVEVKGGDRIPADLRIISANGCKVDNSSLTGESEPQTRSP 361
LVIR GEKM I+ +EVVVGD+VEVKGGDRIPAD+R+IS+ GCKVDNSSLTGESEPQ+RSP
Sbjct: 179 LVIRGGEKMQIHVQEVVVGDVVEVKGGDRIPADIRLISSQGCKVDNSSLTGESEPQSRSP 238
Query: 362 DFTNENPLETRNIAFFSTNCVEGTARGIVVYTGDRTVMGRIATLASGLEGGQTPXXXXXX 541
+FTNENPLET+NI FFSTNCVEGTARG+V+ TGD TVMGRIA+L SGL+ GQTP
Sbjct: 239 EFTNENPLETQNICFFSTNCVEGTARGLVIATGDATVMGRIASLTSGLKVGQTPIAAEIE 298
Query: 542 XXXXXXTGVAVFLGVSFFILSLILEYTWLEAVIFLIGIIVANVPEGXXXXXXXXXXXXXK 721
T VAVFLGV+FF LSLIL YTWLEAVIFLIGIIVANVPEG K
Sbjct: 299 HFIHLITAVAVFLGVTFFGLSLILGYTWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAK 358
Query: 722 RMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGV 901
RMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAH+WFD I++ADT+E Q+G
Sbjct: 359 RMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHLWFDRTIYKADTSEEQTGN 418
Query: 902 SFDKTSATWLALSRIAGLCNRAVFQANQENLPILKRAVAGDASESALLKCIELCCGSVKE 1081
SF K S TW L++IAGLCNRA F+ NQ+ LPI K A GDASESALLK IE SVKE
Sbjct: 419 SFAKGSDTWFILAQIAGLCNRADFKGNQQTLPISKWATTGDASESALLKFIEQSYSSVKE 478
Query: 1082 MRERYTKIVEIPFNSTNKYQLSIHKNPNTAEPRHLLVMKGAPEKDPGRCSSILIHGKGQP 1261
MRE+ K+ EIPFNSTNKYQ+SIH ++++ H+L+MKGAPE+ CS+ L+ G+ P
Sbjct: 479 MREKSPKVAEIPFNSTNKYQMSIHLRGDSSQ-THVLMMKGAPERILEFCSTYLLKGQEHP 537
Query: 1262 LDEELKDAFQNAYLELGGPGKRVLGFCHFFLPDKQVPRSFQFDTDHVKFPLENLCLRGLI 1441
+D+++K+AFQ+AYLELGG G+RVLGFC LP+ + F+F+TD + FP+ENLC GLI
Sbjct: 538 MDDDMKEAFQDAYLELGGLGERVLGFCFLNLPNTYA-KGFKFNTDEINFPMENLCFVGLI 596
Query: 1442 SMNDPPRAXVPDAV 1483
SM DPPRA VPDAV
Sbjct: 597 SMIDPPRAAVPDAV 610
>ref|XP_003131170.2| PREDICTED: potassium-transporting ATPase alpha chain 2 [Sus scrofa].
Length = 1136
Score = 605 bits (1559), Expect = e-173
Identities = 295/494 (59%), Positives = 381/494 (77%)
Frame = +2
Query: 2 LCFLAYGIQAATEEEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQA 181
LC++AYGIQ ++++ DN+YLG VL+ VV++TG F+YYQEAKS+ IM SF M+PQQA
Sbjct: 222 LCWIAYGIQYSSDKSSSLDNVYLGSVLALVVVLTGIFAYYQEAKSTNIMASFHKMIPQQA 281
Query: 182 LVIRNGEKMSINAEEVVVGDLVEVKGGDRIPADLRIISANGCKVDNSSLTGESEPQTRSP 361
LVIR+ EK ++ AE++VVGD+VE+KGGD+IPAD+R+++A GCKVDNSSLTGESEPQ RS
Sbjct: 282 LVIRDSEKKTVPAEQLVVGDIVEIKGGDQIPADIRLLTAQGCKVDNSSLTGESEPQPRSC 341
Query: 362 DFTNENPLETRNIAFFSTNCVEGTARGIVVYTGDRTVMGRIATLASGLEGGQTPXXXXXX 541
+FT+ENPLETRNI FFST C+EGTA G+V+ TGDRT++G+IA+LASG++ +TP
Sbjct: 342 EFTHENPLETRNIGFFSTTCLEGTATGMVINTGDRTIIGQIASLASGVQNVKTPIAVEIE 401
Query: 542 XXXXXXTGVAVFLGVSFFILSLILEYTWLEAVIFLIGIIVANVPEGXXXXXXXXXXXXXK 721
GVAV +G+ FFI+++ ++Y L+++IFLIGIIVANVPEG K
Sbjct: 402 HFVHIVAGVAVSVGILFFIIAVSMKYHVLDSIIFLIGIIVANVPEGLLATVTVTLSLTAK 461
Query: 722 RMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGV 901
RMA+KNCLVKNLEAVETLGSTS ICSDKTGTLTQNRMTVAH+WFDNQI ADT+E S
Sbjct: 462 RMAKKNCLVKNLEAVETLGSTSIICSDKTGTLTQNRMTVAHLWFDNQIFMADTSEAHSNQ 521
Query: 902 SFDKTSATWLALSRIAGLCNRAVFQANQENLPILKRAVAGDASESALLKCIELCCGSVKE 1081
FD++SATW ALS+I LCNRA F+ Q+++PI+K+ V GDASESALLK E+ G V E
Sbjct: 522 VFDQSSATWAALSKIITLCNRAEFRPGQDSVPIMKKVVVGDASESALLKFSEVILGDVME 581
Query: 1082 MRERYTKIVEIPFNSTNKYQLSIHKNPNTAEPRHLLVMKGAPEKDPGRCSSILIHGKGQP 1261
+R+R K+ EIPFNSTNK+QLS+H+ + + R L+VMKGAPE+ +CS+I+++G+ QP
Sbjct: 582 IRKRNRKVAEIPFNSTNKFQLSVHETEDPDDKRFLVVMKGAPERVLEKCSTIMVNGQEQP 641
Query: 1262 LDEELKDAFQNAYLELGGPGKRVLGFCHFFLPDKQVPRSFQFDTDHVKFPLENLCLRGLI 1441
LD +AF AY+ELGG G+RVLGFCH +LP + P ++ FD D V FP + C GL+
Sbjct: 642 LDRSTAEAFHTAYMELGGRGERVLGFCHLYLPADEFPETYSFDVDTVNFPTSSFCFVGLL 701
Query: 1442 SMNDPPRAXVPDAV 1483
SM DPPR+ VPDAV
Sbjct: 702 SMIDPPRSTVPDAV 715
>ref|NP_999456.1| potassium-transporting ATPase alpha chain 1 [Sus scrofa].
Length = 1034
Score = 602 bits (1553), Expect = e-172
Identities = 296/494 (59%), Positives = 374/494 (75%)
Frame = +2
Query: 2 LCFLAYGIQAATEEEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQA 181
+C +A+ IQA+ + +DNLYL + L AVV++TGCF YYQE KS+ I+ SFKN+VPQQA
Sbjct: 120 ICLIAFAIQASEGDLTTDDNLYLALALIAVVVVTGCFGYYQEFKSTNIIASFKNLVPQQA 179
Query: 182 LVIRNGEKMSINAEEVVVGDLVEVKGGDRIPADLRIISANGCKVDNSSLTGESEPQTRSP 361
VIR+G+K INA+++VVGDLVE+KGGDR+PAD+RI+ A G KVDNSSLTGESEPQTRSP
Sbjct: 180 TVIRDGDKFQINADQLVVGDLVEMKGGDRVPADIRILQAQGRKVDNSSLTGESEPQTRSP 239
Query: 362 DFTNENPLETRNIAFFSTNCVEGTARGIVVYTGDRTVMGRIATLASGLEGGQTPXXXXXX 541
+ T+E+PLETRNIAFFST C+EGTA+G+VV TGDRT++GRIA+LASG+E +TP
Sbjct: 240 ECTHESPLETRNIAFFSTMCLEGTAQGLVVNTGDRTIIGRIASLASGVENEKTPIAIEIE 299
Query: 542 XXXXXXTGVAVFLGVSFFILSLILEYTWLEAVIFLIGIIVANVPEGXXXXXXXXXXXXXK 721
G+A+ G +FFI+++ + YT+L A++F + I+VA VPEG K
Sbjct: 300 HFVDIIAGLAILFGATFFIVAMCIGYTFLRAMVFFMAIVVAYVPEGLLATVTVCLSLTAK 359
Query: 722 RMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGV 901
R+A KNC+VKNLEAVETLGSTS ICSDKTGTLTQNRMTV+H+WFDN IH ADTTE+QSG
Sbjct: 360 RLASKNCVVKNLEAVETLGSTSVICSDKTGTLTQNRMTVSHLWFDNHIHSADTTEDQSGQ 419
Query: 902 SFDKTSATWLALSRIAGLCNRAVFQANQENLPILKRAVAGDASESALLKCIELCCGSVKE 1081
+FD++S TW AL R+ LCNRA F++ Q+ +P+ KR V GDASE+ALLK EL G+
Sbjct: 420 TFDQSSETWRALCRVLTLCNRAAFKSGQDAVPVPKRIVIGDASETALLKFSELTLGNAMG 479
Query: 1082 MRERYTKIVEIPFNSTNKYQLSIHKNPNTAEPRHLLVMKGAPEKDPGRCSSILIHGKGQP 1261
RER+ K+ EIPFNSTNK+QLSIH + +PRH+LVMKGAPE+ RCSSILI G+ P
Sbjct: 480 YRERFPKVCEIPFNSTNKFQLSIHTLEDPRDPRHVLVMKGAPERVLERCSSILIKGQELP 539
Query: 1262 LDEELKDAFQNAYLELGGPGKRVLGFCHFFLPDKQVPRSFQFDTDHVKFPLENLCLRGLI 1441
LDE+ ++AFQ AYL LGG G+RVLGFC +L +K P + FD + + FP L GL+
Sbjct: 540 LDEQWREAFQTAYLSLGGLGERVLGFCQLYLSEKDYPPGYAFDVEAMNFPTSGLSFAGLV 599
Query: 1442 SMNDPPRAXVPDAV 1483
SM DPPRA VPDAV
Sbjct: 600 SMIDPPRATVPDAV 613
>ref|XP_003131169.2| PREDICTED: potassium-transporting ATPase alpha chain 2-like [Sus
scrofa].
Length = 445
Score = 278 bits (712), Expect = 4e-75
Identities = 137/234 (58%), Positives = 184/234 (78%), Gaps = 8/234 (3%)
Frame = +2
Query: 2 LCFLAYGIQAATEEEPQNDNL--------YLGVVLSAVVIITGCFSYYQEAKSSKIMESF 157
LC++AYGIQ ++++ DN+ YLG VL+ VV++TG F+YYQEAKS+ IM SF
Sbjct: 202 LCWIAYGIQYSSDKSSSLDNVRACVGLQVYLGSVLALVVVLTGIFAYYQEAKSTNIMASF 261
Query: 158 KNMVPQQALVIRNGEKMSINAEEVVVGDLVEVKGGDRIPADLRIISANGCKVDNSSLTGE 337
M+PQQALVIR+ EK ++ AE++VVGD+VE+KGGD+IPAD+R+++A GCKVDNSSLTGE
Sbjct: 262 HKMIPQQALVIRDSEKKTVPAEQLVVGDIVEIKGGDQIPADIRLLTAQGCKVDNSSLTGE 321
Query: 338 SEPQTRSPDFTNENPLETRNIAFFSTNCVEGTARGIVVYTGDRTVMGRIATLASGLEGGQ 517
SEPQ RS +FT+ENPLETRNI FFST C+EGTA G+V+ TGDRT++G+IA+LASG++ +
Sbjct: 322 SEPQPRSCEFTHENPLETRNIGFFSTTCLEGTATGMVINTGDRTIIGQIASLASGVQNVK 381
Query: 518 TPXXXXXXXXXXXXTGVAVFLGVSFFILSLILEYTWLEAVIFLIGIIVANVPEG 679
TP GVAV +G+ FFI+++ ++Y L+++IFLIGIIVANVPEG
Sbjct: 382 TPIAVEIEHFVHIVAGVAVSVGILFFIIAVSMKYHVLDSIIFLIGIIVANVPEG 435
>ref|XP_003127093.1| PREDICTED: potassium-transporting ATPase alpha chain 1-like [Sus
scrofa].
Length = 241
Score = 229 bits (583), Expect = 4e-60
Identities = 112/196 (57%), Positives = 141/196 (71%)
Frame = +2
Query: 896 GVSFDKTSATWLALSRIAGLCNRAVFQANQENLPILKRAVAGDASESALLKCIELCCGSV 1075
G +FD++S TW AL R+ LCNRA F++ Q+ +P+ KR V GDASE+ALLK EL G+
Sbjct: 16 GQTFDQSSETWRALCRVLTLCNRAAFKSGQDAVPVPKRIVIGDASETALLKFSELTLGNA 75
Query: 1076 KEMRERYTKIVEIPFNSTNKYQLSIHKNPNTAEPRHLLVMKGAPEKDPGRCSSILIHGKG 1255
RER+ K+ EIPFNSTNK+QLSIH + +PRH+LVMKGAPE+ RCSSILI G+
Sbjct: 76 MGYRERFPKVCEIPFNSTNKFQLSIHTLEDPRDPRHVLVMKGAPERVLERCSSILIKGQE 135
Query: 1256 QPLDEELKDAFQNAYLELGGPGKRVLGFCHFFLPDKQVPRSFQFDTDHVKFPLENLCLRG 1435
PLDE+ ++AFQ AYL LGG G+RVLGFC +L +K P + FD + + FP LC G
Sbjct: 136 LPLDEQWREAFQTAYLSLGGLGERVLGFCQLYLSEKDYPPGYAFDVEAMNFPTSGLCFAG 195
Query: 1436 LISMNDPPRAXVPDAV 1483
L+SM DPPRA VPDAV
Sbjct: 196 LVSMIDPPRATVPDAV 211
>ref|XP_003126874.1| PREDICTED: calcium-transporting ATPase type 2C member 2 [Sus scrofa].
Length = 947
Score = 182 bits (461), Expect = 5e-46
Identities = 151/485 (31%), Positives = 221/485 (45%), Gaps = 15/485 (3%)
Frame = +2
Query: 74 VVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQALVIRNGEKMSINAEEVVVGDLVEV 253
V ++ V+I ++ QE +S K +E +VP + IR G+ + A ++V GD+V +
Sbjct: 135 VSIAVAVLIVVTVAFIQEYRSEKSLEELTKLVPPECNCIREGKLQHLLARDLVPGDIVSL 194
Query: 254 KGGDRIPADLRIISANGCKVDNSSLTGESEPQTRS-PDFTNENPLET-RNIAFFSTNCVE 427
GDRIPAD+R+ VD SS TGE+EP +++ T L T NI F T
Sbjct: 195 SIGDRIPADIRLTEVTDLLVDESSFTGEAEPSSKTDTPLTGGGDLTTLSNIVFMGTLVQC 254
Query: 428 GTARGIVVYTGDRTVMGRIATLASGLEGGQTPXXXXXXXXXXXXTGVAVFLGVSFFILSL 607
G A+G+V+ TG+R+ G + + E +TP T +F SF I+ L
Sbjct: 255 GKAQGVVIGTGERSQFGEVFKMMQAEETPKTPLQKSMDKLGKQLT---LF---SFGIIGL 308
Query: 608 ILEYTWLEA----VIFLIGI--IVANVPEGXXXXXXXXXXXXXKRMARKNCLVKNLEAVE 769
I+ WL+ +F IG+ VA +PEG RMARK +VK L VE
Sbjct: 309 IMFTGWLQGKQLLSMFTIGVSLAVAAIPEGLPIVVTVTLVLGVLRMARKRVIVKKLPIVE 368
Query: 770 TLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGVSFDKTSATWLALSR-- 943
TLG + ICSDKTGTLT N MTV + + +H SGV ++ L S+
Sbjct: 369 TLGCCNVICSDKTGTLTANEMTVTQLVTSDGLH-----AEVSGVGYNGKGTVCLLPSKEV 423
Query: 944 IAGLCNRAVFQANQ-----ENLPILKRAVAGDASESALLKCIELCCGSVKEMRERYTKIV 1108
I N +V + + N I + V G +E AL+ + E+++ Y +
Sbjct: 424 IKEFSNVSVGKLVEAGCVANNAIIRRNTVMGQPTEGALIALAMKM--DLSEIKDSYVRKK 481
Query: 1109 EIPFNSTNKYQLSIHKNPNTAEPRHLLVMKGAPEKDPGRCSSILIHGKGQPLDEELKDAF 1288
EIPF+S K+ N +P + MKGA E+ C++ G PL + + +
Sbjct: 482 EIPFSSEQKWMAVQCSPRNEEQPEDVHFMKGAFEEVIRYCTTYNTGGIPLPLTPQQRALW 541
Query: 1289 QNAYLELGGPGKRVLGFCHFFLPDKQVPRSFQFDTDHVKFPLENLCLRGLISMNDPPRAX 1468
Q +G G RVL P+ L L GL+ + DPPRA
Sbjct: 542 QQEEKRMGSLGLRVLALASG--PE-----------------LGRLTFLGLVGIIDPPRAG 582
Query: 1469 VPDAV 1483
V +AV
Sbjct: 583 VKEAV 587
>ref|XP_003358358.1| PREDICTED: calcium-transporting ATPase type 2C member 1 [Sus scrofa].
Length = 725
Score = 169 bits (429), Expect = 3e-42
Identities = 138/487 (28%), Positives = 218/487 (44%), Gaps = 17/487 (3%)
Frame = +2
Query: 74 VVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQALVIRNGEKMSINAEEVVVGDLVEV 253
V ++ ++I ++ QE +S K +E ++P + +R G+ A ++V GD V +
Sbjct: 138 VSITVAILIVVTVAFVQEYRSEKSLEELSKLMPPECHCVREGKLEHTLARDLVPGDTVCL 197
Query: 254 KGGDRIPADLRIISANGCKVDNSSLTGESEPQTR----SPDFTNENPLETRNIAFFSTNC 421
GDR+PADLR+ A VD SSLTGE+ P ++ P TN + NIAF T
Sbjct: 198 SVGDRVPADLRLFEAVDLSVDESSLTGETTPCSKVTAPQPAATNGDLASRSNIAFMGTLV 257
Query: 422 VEGTARGIVVYTGDRTVMGRIATLASGLEGGQTPXXXXXXXXXXXXTGVAVFLGVSFFIL 601
G A+GIV+ TG+ + G + + E +TP + SF I+
Sbjct: 258 RCGKAKGIVIGTGENSEFGEVFKMMQAEEAPKTPLQKSMDLLGKQLS------FYSFGII 311
Query: 602 SLILEYTW------LEAVIFLIGIIVANVPEGXXXXXXXXXXXXXKRMARKNCLVKNLEA 763
+I+ W LE + + VA +PEG RM +K +VK L
Sbjct: 312 GVIMLVGWLLGKDILEMFTISVSLAVAAIPEGLPIVVTVTLALGVMRMVKKRAIVKKLPI 371
Query: 764 VETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGVSFDKTSATWLALSR 943
VETLG + ICSDKTGTLT+N MTV H++ + + T GV ++ +
Sbjct: 372 VETLGCCNVICSDKTGTLTKNEMTVTHIFTSDGLRAEVT-----GVGYNPFGEVIVDGDV 426
Query: 944 IAGLCNRAVFQANQ-----ENLPILKRAVAGDASESALLKCIELCCGSVKEMRERYTKIV 1108
+ G N +V + + + I + G +E AL+ + + G + +++ Y +
Sbjct: 427 VHGFYNPSVSRIVEAGCVCNDAVIRNNTLMGKPTEGALI-ALAMKMG-LDGLQQDYIRKA 484
Query: 1109 EIPFNSTNKYQLSIHKNPNTAEPRHLLVMKGAPEKDPGRCSSILIHGKGQ--PLDEELKD 1282
E PF+S K+ + + + MKGA E+ C++ H KGQ L ++ +D
Sbjct: 485 EYPFSSEQKWMAVKCVHRTQQDRPEICFMKGAYEQVIKYCTT--YHNKGQTLTLTQQQRD 542
Query: 1283 AFQNAYLELGGPGKRVLGFCHFFLPDKQVPRSFQFDTDHVKFPLENLCLRGLISMNDPPR 1462
+Q ++G G RVL P+ L L GL+ + DPPR
Sbjct: 543 LYQQEKAQMGSAGLRVLALASG--PE-----------------LGQLTFLGLVGIIDPPR 583
Query: 1463 AXVPDAV 1483
V +AV
Sbjct: 584 TGVKEAV 590
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 37,675,584
Number of extensions: 1072798
Number of successful extensions: 3864
Number of sequences better than 1.0e-05: 24
Number of HSP's gapped: 3828
Number of HSP's successfully gapped: 30
Length of query: 494
Length of database: 11,343,932
Length adjustment: 103
Effective length of query: 391
Effective length of database: 8,779,541
Effective search space: 3432800531
Effective search space used: 3432800531
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-001369
(1484 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|GL893344.2| Sus scrofa unplaced genomic scaffold ChrUScaf1229 543 e-152
Sscrofa_Chr04 543 e-152
Sscrofa_Chr06 228 7e-57
Sscrofa_Chr11 137 2e-29
>gb|GL893344.2| Sus scrofa unplaced genomic scaffold ChrUScaf1229
Length = 169786
Score = 543 bits (274), Expect = e-152
Identities = 274/274 (100%)
Strand = Plus / Minus
Query: 426 aaggcactgcacgtggtattgtggtgtacactggcgatcgcaccgtgatgggcagaatcg 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22781 aaggcactgcacgtggtattgtggtgtacactggcgatcgcaccgtgatgggcagaatcg 22722
Query: 486 ctacccttgcttccgggctggaagggggccagactcccatcgctgcggagattgaacatt 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22721 ctacccttgcttccgggctggaagggggccagactcccatcgctgcggagattgaacatt 22662
Query: 546 ttatccacatcatcacgggcgtggccgtgttcctgggcgtgtccttcttcatcctttctc 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22661 ttatccacatcatcacgggcgtggccgtgttcctgggcgtgtccttcttcatcctttctc 22602
Query: 606 tgatcctcgagtacacctggctcgaggccgtcatcttcctcatcgggatcattgtagcca 665
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22601 tgatcctcgagtacacctggctcgaggccgtcatcttcctcatcgggatcattgtagcca 22542
Query: 666 acgtgcctgaaggtttgctggccaccgtcacggt 699
||||||||||||||||||||||||||||||||||
Sbjct: 22541 acgtgcctgaaggtttgctggccaccgtcacggt 22508
Score = 341 bits (172), Expect = 7e-91
Identities = 195/200 (97%), Gaps = 2/200 (1%)
Strand = Plus / Minus
Query: 1138 ccagctgtccatccacaagaaccccaacacggctgagccccggcacctgctggtgatgaa 1197
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19099 ccagctgtccatccacaagaaccccaacacggctgagccccggcacctgctggtgatgaa 19040
Query: 1198 aggtgctccagaaaaggatcctggac-gctgcagctccatcctcatccacggcaaggggc 1256
|||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| ||
Sbjct: 19039 aggtgctccagaaa-ggatcctggaccgctgcagctccatcctcatccacggcaaggagc 18981
Query: 1257 agcccctggacgaggagctgaaggacgcctttcagaacgcctacctggagctgggtggcc 1316
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18980 agcccctggacgaggagctgaaggacgcctttcagaacgcctacctggagctgggtggcc 18921
Query: 1317 ccgggaaacgcgtgctgggt 1336
|||| ||||||||||||||
Sbjct: 18920 tcggggaacgcgtgctgggt 18901
Score = 264 bits (133), Expect = 1e-67
Identities = 136/137 (99%)
Strand = Plus / Minus
Query: 1005 agcgggcagtggcgggcgacgcctccgagtccgcgctcttaaagtgcatcgagctgtgct 1064
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19749 agcgggcagtggcgggcgacgcctccgagtccgcgctcttaaagtgcatcgagctgtgct 19690
Query: 1065 gtgggtccgtgaaggagatgagggagcgatacaccaagatcgtcgagattcccttcaact 1124
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19689 gcgggtccgtgaaggagatgagggagcgatacaccaagatcgtcgagattcccttcaact 19630
Query: 1125 ccaccaacaagtaccag 1141
|||||||||||||||||
Sbjct: 19629 ccaccaacaagtaccag 19613
Score = 226 bits (114), Expect = 3e-56
Identities = 114/114 (100%)
Strand = Plus / Minus
Query: 62 ctgtaccttggtgtggtgctctccgccgtcgtcatcataactggctgtttctcctactat 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24350 ctgtaccttggtgtggtgctctccgccgtcgtcatcataactggctgtttctcctactat 24291
Query: 122 caagaagcgaaaagctcaaagatcatggaatccttcaaaaacatggttcctcag 175
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24290 caagaagcgaaaagctcaaagatcatggaatccttcaaaaacatggttcctcag 24237
Score = 172 bits (87), Expect = 4e-40
Identities = 93/95 (97%)
Strand = Plus / Minus
Query: 309 aggtggacaactcctccctcactggtgaatcagaaccgcagaccaggtctccagatttca 368
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 23583 aggtggacaactcctccctcaccggtgaatcagaaccgcagaccaggtctccagatttca 23524
Query: 369 ccaatgagaaccccctggagactaggaacatcgcc 403
||||||||||||||||||||||||| |||||||||
Sbjct: 23523 ccaatgagaaccccctggagactagaaacatcgcc 23489
Score = 133 bits (67), Expect = 3e-28
Identities = 67/67 (100%)
Strand = Plus / Minus
Query: 174 agcaagccctggtgattcgaaatggtgaaaagatgagcataaatgcagaggaagtcgtcg 233
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23846 agcaagccctggtgattcgaaatggtgaaaagatgagcataaatgcagaggaagtcgtcg 23787
Query: 234 tcgggga 240
|||||||
Sbjct: 23786 tcgggga 23780
Score = 127 bits (64), Expect = 2e-26
Identities = 90/99 (90%)
Strand = Plus / Minus
Query: 1386 ttgacaccgaccatgtgaaattccctctcgaaaatctctgcctccgtgggctcatctcca 1445
||||||||||| ||||||| ||||||||||| ||||||||| || ||||||||||||||
Sbjct: 17375 ttgacaccgacgatgtgaatttccctctcgataatctctgcttcgttgggctcatctcca 17316
Query: 1446 tgaatgacccaccgcgagcgnccgtccccgatgccgtgg 1484
||| |||||||||||||||| ||||||| ||||||||||
Sbjct: 17315 tgattgacccaccgcgagcggccgtcccggatgccgtgg 17277
Score = 119 bits (60), Expect = 5e-24
Identities = 60/60 (100%)
Strand = Plus / Minus
Query: 697 ggtgtgcttgaccctgactgccaagcgcatggccaggaagaactgccttgtgaagaactt 756
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21994 ggtgtgcttgaccctgactgccaagcgcatggccaggaagaactgccttgtgaagaactt 21935
Score = 113 bits (57), Expect = 3e-22
Identities = 60/61 (98%)
Strand = Plus / Minus
Query: 1 tctttgtttcttggcctatggcattcaagctgctacagaagaggaacctcaaaatgataa 60
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 25260 tctttgtttcttggcctatggcattcaagctgctaccgaagaggaacctcaaaatgataa 25201
Query: 61 t 61
|
Sbjct: 25200 t 25200
>Sscrofa_Chr04
|| Length = 143465943
Score = 543 bits (274), Expect = e-152
Identities = 274/274 (100%)
Strand = Plus / Minus
Query: 426 aaggcactgcacgtggtattgtggtgtacactggcgatcgcaccgtgatgggcagaatcg 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 114446430 aaggcactgcacgtggtattgtggtgtacactggcgatcgcaccgtgatgggcagaatcg 114446371
Query: 486 ctacccttgcttccgggctggaagggggccagactcccatcgctgcggagattgaacatt 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 114446370 ctacccttgcttccgggctggaagggggccagactcccatcgctgcggagattgaacatt 114446311
Query: 546 ttatccacatcatcacgggcgtggccgtgttcctgggcgtgtccttcttcatcctttctc 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 114446310 ttatccacatcatcacgggcgtggccgtgttcctgggcgtgtccttcttcatcctttctc 114446251
Query: 606 tgatcctcgagtacacctggctcgaggccgtcatcttcctcatcgggatcattgtagcca 665
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 114446250 tgatcctcgagtacacctggctcgaggccgtcatcttcctcatcgggatcattgtagcca 114446191
Query: 666 acgtgcctgaaggtttgctggccaccgtcacggt 699
||||||||||||||||||||||||||||||||||
Sbjct: 114446190 acgtgcctgaaggtttgctggccaccgtcacggt 114446157
Score = 392 bits (198), Expect = e-106
Identities = 201/202 (99%)
Strand = Plus / Minus
Query: 697 ggtgtgcttgaccctgactgccaagcgcatggccaggaagaactgccttgtgaagaactt 756
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 114445643 ggtgtgcttgaccctgactgccaagcgcatggccaggaagaactgccttgtgaagaactt 114445584
Query: 757 ggaggctgtggagactctggggtccacatccaccatctgctcagacaaaaccggaaccct 816
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 114445583 ggaggctgtggagaccctggggtccacatccaccatctgctcagacaaaaccggaaccct 114445524
Query: 817 cacccagaaccgaatgacagtggcccacatgtggttcgacaatcaaatccacgaggctga 876
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 114445523 cacccagaaccgaatgacagtggcccacatgtggttcgacaatcaaatccacgaggctga 114445464
Query: 877 cacgacggaaaatcagagcggt 898
||||||||||||||||||||||
Sbjct: 114445463 cacgacggaaaatcagagcggt 114445442
Score = 341 bits (172), Expect = 7e-91
Identities = 195/200 (97%), Gaps = 2/200 (1%)
Strand = Plus / Minus
Query: 1138 ccagctgtccatccacaagaaccccaacacggctgagccccggcacctgctggtgatgaa 1197
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 114441679 ccagctgtccatccacaagaaccccaacacggctgagccccggcacctgctggtgatgaa 114441620
Query: 1198 aggtgctccagaaaaggatcctggac-gctgcagctccatcctcatccacggcaaggggc 1256
|||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| ||
Sbjct: 114441619 aggtgctccagaaa-ggatcctggaccgctgcagctccatcctcatccacggcaaggagc 114441561
Query: 1257 agcccctggacgaggagctgaaggacgcctttcagaacgcctacctggagctgggtggcc 1316
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 114441560 agcccctggacgaggagctgaaggacgcctttcagaacgcctacctggagctgggtggcc 114441501
Query: 1317 ccgggaaacgcgtgctgggt 1336
|||| ||||||||||||||
Sbjct: 114441500 tcggggaacgcgtgctgggt 114441481
Score = 280 bits (141), Expect = 2e-72
Identities = 141/141 (100%)
Strand = Plus / Minus
Query: 174 agcaagccctggtgattcgaaatggtgaaaagatgagcataaatgcagaggaagtcgtcg 233
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 114447401 agcaagccctggtgattcgaaatggtgaaaagatgagcataaatgcagaggaagtcgtcg 114447342
Query: 234 tcggggatctggtggaggtgaagggaggggatcgaatccctgctgacctcaggatcatat 293
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 114447341 tcggggatctggtggaggtgaagggaggggatcgaatccctgctgacctcaggatcatat 114447282
Query: 294 ctgcgaacggctgcaaggtgg 314
|||||||||||||||||||||
Sbjct: 114447281 ctgcgaacggctgcaaggtgg 114447261
Score = 264 bits (133), Expect = 1e-67
Identities = 136/137 (99%)
Strand = Plus / Minus
Query: 1005 agcgggcagtggcgggcgacgcctccgagtccgcgctcttaaagtgcatcgagctgtgct 1064
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 114442329 agcgggcagtggcgggcgacgcctccgagtccgcgctcttaaagtgcatcgagctgtgct 114442270
Query: 1065 gtgggtccgtgaaggagatgagggagcgatacaccaagatcgtcgagattcccttcaact 1124
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 114442269 gcgggtccgtgaaggagatgagggagcgatacaccaagatcgtcgagattcccttcaact 114442210
Query: 1125 ccaccaacaagtaccag 1141
|||||||||||||||||
Sbjct: 114442209 ccaccaacaagtaccag 114442193
Score = 226 bits (114), Expect = 3e-56
Identities = 114/114 (100%)
Strand = Plus / Minus
Query: 62 ctgtaccttggtgtggtgctctccgccgtcgtcatcataactggctgtttctcctactat 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 114447905 ctgtaccttggtgtggtgctctccgccgtcgtcatcataactggctgtttctcctactat 114447846
Query: 122 caagaagcgaaaagctcaaagatcatggaatccttcaaaaacatggttcctcag 175
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 114447845 caagaagcgaaaagctcaaagatcatggaatccttcaaaaacatggttcctcag 114447792
Score = 212 bits (107), Expect = 4e-52
Identities = 110/111 (99%)
Strand = Plus / Minus
Query: 896 ggtgtctcgttcgacaagacttcggccacctggcttgctctgtccagaattgcaggtctt 955
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 114445174 ggtgtctcattcgacaagacttcggccacctggcttgctctgtccagaattgcaggtctt 114445115
Query: 956 tgtaacagggcagtgttccaggccaaccaggaaaacctacctatcctgaag 1006
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 114445114 tgtaacagggcagtgttccaggccaaccaggaaaacctacctatcctgaag 114445064
Score = 198 bits (100), Expect = 6e-48
Identities = 172/196 (87%)
Strand = Plus / Minus
Query: 697 ggtgtgcttgaccctgactgccaagcgcatggccaggaagaactgccttgtgaagaactt 756
|||||| ||||||||||| |||||||||||||| ||||||||||||| ||||||||| |
Sbjct: 98298239 ggtgtgtttgaccctgacggccaagcgcatggctcggaagaactgcctggtgaagaacct 98298180
Query: 757 ggaggctgtggagactctggggtccacatccaccatctgctcagacaaaaccggaaccct 816
|||||| |||||||| ||||| ||||| ||||||||||| |||||||| || || |||||
Sbjct: 98298179 ggaggcggtggagacgctgggctccacctccaccatctgttcagacaagacgggcaccct 98298120
Query: 817 cacccagaaccgaatgacagtggcccacatgtggttcgacaatcaaatccacgaggctga 876
|||||||||||| ||||| || ||||| |||||||| ||||| || ||||| ||||||||
Sbjct: 98298119 cacccagaaccgcatgaccgtcgcccatatgtggtttgacaaccagatccatgaggctga 98298060
Query: 877 cacgacggaaaatcag 892
||| |||||| |||||
Sbjct: 98298059 caccacggaagatcag 98298044
Score = 176 bits (89), Expect = 2e-41
Identities = 138/152 (90%), Gaps = 2/152 (1%)
Strand = Plus / Minus
Query: 1334 ggtttctgccactttttcctgccggacaagcaagtcccccgaag-cttccagtttgacac 1392
|||||||||||| |||||||||||||| |||| || |||||||| |||||||||||||||
Sbjct: 114440168 ggtttctgccaccttttcctgccggacgagca-gttccccgaaggcttccagtttgacac 114440110
Query: 1393 cgaccatgtgaaattccctctcgaaaatctctgcctccgtgggctcatctccatgaatga 1452
|||| ||||||| ||||||||||| ||||||||| || ||||||||||||||||| |||
Sbjct: 114440109 cgacgatgtgaatttccctctcgataatctctgcttcgttgggctcatctccatgattga 114440050
Query: 1453 cccaccgcgagcgnccgtccccgatgccgtgg 1484
||||||||||||| ||||||| ||||||||||
Sbjct: 114440049 cccaccgcgagcggccgtcccggatgccgtgg 114440018
Score = 174 bits (88), Expect = 9e-41
Identities = 111/121 (91%)
Strand = Plus / Minus
Query: 309 aggtggacaactcctccctcactggtgaatcagaaccgcagaccaggtctccagatttca 368
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 114447159 aggtggacaactcctccctcaccggtgaatcagaaccgcagaccaggtctccagatttca 114447100
Query: 369 ccaatgagaaccccctggagactaggaacatcgccnnnnnnncaaccaactgcgttgaag 428
||||||||||||||||||||||||| ||||||||| |||||||||| |||||||
Sbjct: 114447099 ccaatgagaaccccctggagactagaaacatcgcctttttttcaaccaactgtgttgaag 114447040
Query: 429 g 429
|
Sbjct: 114447039 g 114447039
Score = 165 bits (83), Expect = 9e-38
Identities = 134/151 (88%)
Strand = Plus / Minus
Query: 705 tgaccctgactgccaagcgcatggccaggaagaactgccttgtgaagaacttggaggctg 764
|||||||||| |||||||||||||| ||||||||||||| ||||||||| ||||||| |
Sbjct: 98258451 tgaccctgacggccaagcgcatggctcggaagaactgcctggtgaagaacctggaggcgg 98258392
Query: 765 tggagactctggggtccacatccaccatctgctcagacaaaaccggaaccctcacccaga 824
||||||| ||||| ||||| ||||||||||| |||||||| || || |||||||||||||
Sbjct: 98258391 tggagacgctgggctccacctccaccatctgttcagacaagacgggcaccctcacccaga 98258332
Query: 825 accgaatgacagtggcccacatgtggttcga 855
|||| ||||| || |||||| ||||||||||
Sbjct: 98258331 accgcatgaccgtcgcccacctgtggttcga 98258301
Score = 113 bits (57), Expect = 3e-22
Identities = 60/61 (98%)
Strand = Plus / Minus
Query: 1 tctttgtttcttggcctatggcattcaagctgctacagaagaggaacctcaaaatgataa 60
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 114448819 tctttgtttcttggcctatggcattcaagctgctaccgaagaggaacctcaaaatgataa 114448760
Query: 61 t 61
|
Sbjct: 114448759 t 114448759
Score = 89.7 bits (45), Expect = 4e-15
Identities = 108/129 (83%)
Strand = Plus / Minus
Query: 572 gtgttcctgggcgtgtccttcttcatcctttctctgatcctcgagtacacctggctcgag 631
||||||||||| || ||||||||| | || || || ||||| | |||| |||||| |||
Sbjct: 98299581 gtgttcctgggggtctccttcttcgtgctgtcccttatcctgggctacagctggctggag 98299522
Query: 632 gccgtcatcttcctcatcgggatcattgtagccaacgtgcctgaaggtttgctggccacc 691
|| || |||||||||||||| ||||| || ||||| |||||||| ||| ||||||||||
Sbjct: 98299521 gctgttatcttcctcatcggcatcatcgtggccaatgtgcctgagggtctgctggccact 98299462
Query: 692 gtcacggtg 700
|||||||||
Sbjct: 98299461 gtcacggtg 98299453
Score = 67.9 bits (34), Expect = 1e-08
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 1262 ctggacgaggagctgaaggacgcctttcagaacgcctacctggagctggg 1311
|||||| ||||| || |||||||||| |||||||||||||||||||||||
Sbjct: 98296674 ctggacaaggagatgcaggacgccttccagaacgcctacctggagctggg 98296625
Score = 63.9 bits (32), Expect = 2e-07
Identities = 71/84 (84%)
Strand = Plus / Minus
Query: 617 tacacctggctcgaggccgtcatcttcctcatcgggatcattgtagccaacgtgcctgaa 676
||||||||||| ||||| ||||| || || || || |||||||| || || ||||||||
Sbjct: 98260831 tacacctggctggaggctgtcatttttcttattggcatcattgtggcaaatgtgcctgag 98260772
Query: 677 ggtttgctggccaccgtcacggtg 700
|| ||||||||||||||||||||
Sbjct: 98260771 gggctgctggccaccgtcacggtg 98260748
Score = 63.9 bits (32), Expect = 2e-07
Identities = 62/72 (86%)
Strand = Plus / Minus
Query: 104 ggctgtttctcctactatcaagaagcgaaaagctcaaagatcatggaatccttcaaaaac 163
||||| ||||||||||| || ||||| || ||||| ||||||||||| || ||||| |||
Sbjct: 98303497 ggctgcttctcctactaccaggaagccaagagctccaagatcatggattctttcaagaac 98303438
Query: 164 atggttcctcag 175
||||| ||||||
Sbjct: 98303437 atggtgcctcag 98303426
>Sscrofa_Chr06
|| Length = 157765593
Score = 228 bits (115), Expect = 7e-57
Identities = 160/175 (91%)
Strand = Plus / Minus
Query: 705 tgaccctgactgccaagcgcatggccaggaagaactgccttgtgaagaacttggaggctg 764
||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||| |
Sbjct: 45804458 tgaccctgactgccaagcgcatggctcggaagaactgccttgtgaaaaacctggaggccg 45804399
Query: 765 tggagactctggggtccacatccaccatctgctcagacaaaaccggaaccctcacccaga 824
| ||||| ||||| ||||||||||||||||||||||||||||| || |||||||||||||
Sbjct: 45804398 tagagaccctgggctccacatccaccatctgctcagacaaaacagggaccctcacccaga 45804339
Query: 825 accgaatgacagtggcccacatgtggttcgacaatcaaatccacgaggctgacac 879
|||| ||||| || |||||||||||||||||||| || |||||||||||||||||
Sbjct: 45804338 accgcatgacggtcgcccacatgtggttcgacaaccagatccacgaggctgacac 45804284
Score = 228 bits (115), Expect = 7e-57
Identities = 160/175 (91%)
Strand = Plus / Plus
Query: 705 tgaccctgactgccaagcgcatggccaggaagaactgccttgtgaagaacttggaggctg 764
||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||| |
Sbjct: 45934194 tgaccctgactgccaagcgcatggctcggaagaactgccttgtgaaaaacctggaggccg 45934253
Query: 765 tggagactctggggtccacatccaccatctgctcagacaaaaccggaaccctcacccaga 824
| ||||| ||||| ||||||||||||||||||||||||||||| || |||||||||||||
Sbjct: 45934254 tagagaccctgggctccacatccaccatctgctcagacaaaacagggaccctcacccaga 45934313
Query: 825 accgaatgacagtggcccacatgtggttcgacaatcaaatccacgaggctgacac 879
|||| ||||| || |||||||||||||||||||| || |||||||||||||||||
Sbjct: 45934314 accgcatgacggtcgcccacatgtggttcgacaaccagatccacgaggctgacac 45934368
Score = 121 bits (61), Expect = 1e-24
Identities = 190/233 (81%)
Strand = Plus / Plus
Query: 464 cgcaccgtgatgggcagaatcgctacccttgcttccgggctggaagggggccagactccc 523
|||||||| |||||| | ||||| ||| | ||||| |||||||| | |||| |||| |||
Sbjct: 45932327 cgcaccgtcatgggccgcatcgccaccttggcttcggggctggaggtgggcaagacgccc 45932386
Query: 524 atcgctgcggagattgaacattttatccacatcatcacgggcgtggccgtgttcctgggc 583
||||| ||||| || || || ||||| ||||||| ||||||||||| |||||||||
Sbjct: 45932387 atcgccatcgagatcgagcacttcatccagctcatcaccggcgtggccgtcttcctgggc 45932446
Query: 584 gtgtccttcttcatcctttctctgatcctcgagtacacctggctcgaggccgtcatcttc 643
|| |||||||||||||| || || || || | ||||| ||||||||||| |||||||||
Sbjct: 45932447 gtctccttcttcatcctctccctcattctgggctacacttggctcgaggctgtcatcttc 45932506
Query: 644 ctcatcgggatcattgtagccaacgtgcctgaaggtttgctggccaccgtcac 696
|| ||||| ||||| || |||||||| || || || |||||||||| |||||
Sbjct: 45932507 cttatcggcatcatcgtggccaacgtcccagagggcctgctggccactgtcac 45932559
Score = 97.6 bits (49), Expect = 2e-17
Identities = 133/161 (82%)
Strand = Plus / Plus
Query: 708 ccctgactgccaagcgcatggccaggaagaactgccttgtgaagaacttggaggctgtgg 767
||||||| |||||||| ||||||| |||||||| |||| |||||| |||| || ||||
Sbjct: 40387066 ccctgacagccaagcggctggccagcaagaactgtgttgtcaagaacctggaagcggtgg 40387125
Query: 768 agactctggggtccacatccaccatctgctcagacaaaaccggaaccctcacccagaacc 827
|||| ||||| ||||| || ||||||||| ||||| || || |||||||| ||||| |
Sbjct: 40387126 agacactgggctccacgtcagtcatctgctctgacaagacggggaccctcactcagaatc 40387185
Query: 828 gaatgacagtggcccacatgtggttcgacaatcaaatccac 868
| ||||| ||| ||||| ||||||||||||| || ||||||
Sbjct: 40387186 gcatgactgtgtcccacctgtggttcgacaaccacatccac 40387226
Score = 97.6 bits (49), Expect = 2e-17
Identities = 133/161 (82%)
Strand = Plus / Minus
Query: 708 ccctgactgccaagcgcatggccaggaagaactgccttgtgaagaacttggaggctgtgg 767
||||||| |||||||| ||||||| |||||||| |||| |||||| |||| || ||||
Sbjct: 40449983 ccctgacagccaagcggctggccagcaagaactgtgttgtcaagaacctggaagcggtgg 40449924
Query: 768 agactctggggtccacatccaccatctgctcagacaaaaccggaaccctcacccagaacc 827
|||| ||||| ||||| || ||||||||| ||||| || || |||||||| ||||| |
Sbjct: 40449923 agacactgggctccacgtcagtcatctgctctgacaagacggggaccctcactcagaatc 40449864
Query: 828 gaatgacagtggcccacatgtggttcgacaatcaaatccac 868
| ||||| ||| ||||| ||||||||||||| || ||||||
Sbjct: 40449863 gcatgactgtgtcccacctgtggttcgacaaccacatccac 40449823
Score = 91.7 bits (46), Expect = 1e-15
Identities = 76/86 (88%)
Strand = Plus / Plus
Query: 86 gccgtcgtcatcataactggctgtttctcctactatcaagaagcgaaaagctcaaagatc 145
||||| |||||||| || ||||| ||||||||||| || ||||| || ||||||||||||
Sbjct: 45825352 gccgtggtcatcatcaccggctgcttctcctactaccaggaagccaagagctcaaagatc 45825411
Query: 146 atggaatccttcaaaaacatggttcc 171
||||| |||||||| |||||||||||
Sbjct: 45825412 atggagtccttcaagaacatggttcc 45825437
Score = 91.7 bits (46), Expect = 1e-15
Identities = 76/86 (88%)
Strand = Plus / Plus
Query: 86 gccgtcgtcatcataactggctgtttctcctactatcaagaagcgaaaagctcaaagatc 145
||||| |||||||| || ||||| ||||||||||| || ||||| || ||||||||||||
Sbjct: 45931183 gccgtggtcatcatcaccggctgcttctcctactaccaggaagccaagagctcaaagatc 45931242
Query: 146 atggaatccttcaaaaacatggttcc 171
||||| |||||||| |||||||||||
Sbjct: 45931243 atggagtccttcaagaacatggttcc 45931268
Score = 60.0 bits (30), Expect = 4e-06
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 1255 gcagcccctggacgaggagctgaaggacgcctttcagaacgcctacctggagct 1308
|||||| |||||||| ||| ||||||| ||||| |||||||||||||| |||||
Sbjct: 45937322 gcagccgctggacgaagagatgaaggaagccttccagaacgcctacctcgagct 45937375
>Sscrofa_Chr11
|| Length = 87690581
Score = 137 bits (69), Expect = 2e-29
Identities = 129/149 (86%)
Strand = Plus / Minus
Query: 710 ctgactgccaagcgcatggccaggaagaactgccttgtgaagaacttggaggctgtggag 769
||||| || ||||| ||||||| |||||||||||| ||||||||| ||||||| ||||||
Sbjct: 87540157 ctgacggcaaagcggatggccaagaagaactgcctggtgaagaacctggaggccgtggag 87540098
Query: 770 actctggggtccacatccaccatctgctcagacaaaaccggaaccctcacccagaaccga 829
|| ||||| ||||| |||| ||||||||| ||||| || || ||||| ||||||||| ||
Sbjct: 87540097 accctgggctccacctccatcatctgctcggacaagacggggaccctgacccagaacaga 87540038
Query: 830 atgacagtggcccacatgtggttcgacaa 858
||||| |||||||| |||||||||||||
Sbjct: 87540037 atgaccgtggcccatctgtggttcgacaa 87540009
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 38,062,526
Number of extensions: 259
Number of successful extensions: 259
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 256
Number of HSP's successfully gapped: 34
Length of query: 1484
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 1463
Effective length of database: 2,808,413,156
Effective search space: 4108708447228
Effective search space used: 4108708447228
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)