Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-001413
(2012 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001192331.1| transforming growth factor-beta-induced prot... 845 0.0
Alignment gi|NP_001035569.1| periostin [Bos taurus]. 325 1e-88
Alignment gi|NP_001192499.1| stabilin-1 [Bos taurus]. 61 4e-09
Alignment gi|XP_002697066.1| PREDICTED: stabilin-2-like [Bos taurus]. 61 4e-09
Alignment gi|NP_001193608.1| hyaluronan receptor for endocytosis-like [Bo... 54 5e-07
Alignment gi|XP_606270.3| PREDICTED: stabilin 2, partial [Bos taurus]. 54 5e-07
>ref|NP_001192331.1| transforming growth factor-beta-induced protein ig-h3 [Bos taurus].
Length = 683
Score = 845 bits (2182), Expect = 0.0
Identities = 435/469 (92%), Positives = 447/469 (95%)
Frame = +2
Query: 2 ARLLKADHHATNGVVHLIDKVISTVTNNIQQIIEIEDTFETLRAAVAASGLNTLLEGDGQ 181
ARLLKADHHATNGVVHLIDKVISTVTNNIQQIIEIEDTFETLRAAVAASGLNTLLEGDGQ
Sbjct: 215 ARLLKADHHATNGVVHLIDKVISTVTNNIQQIIEIEDTFETLRAAVAASGLNTLLEGDGQ 274
Query: 182 YTLLAPTNEAFEKIPAETLNRILGDPEALRDLLNNHILKSAMCAEAIVAXXXXXXXXXXX 361
YTLLAPTNEAFEKIPAETLNRILGDPEALRDLLNNHILKSAMCAEAIVA
Sbjct: 275 YTLLAPTNEAFEKIPAETLNRILGDPEALRDLLNNHILKSAMCAEAIVAGLSLETLEGTT 334
Query: 362 XXXXCSGDMLTINGKPIISNKDVLAINGVIHFIDELLIPDSAKTLFELAAESDVSTAVDL 541
CSGDMLTINGKPIISNKDVLA NGVIHFIDELLIPDSAKTLFELAA+SDVSTA+DL
Sbjct: 335 LEVGCSGDMLTINGKPIISNKDVLATNGVIHFIDELLIPDSAKTLFELAADSDVSTAIDL 394
Query: 542 FRQAGLGSHLSGNERLTLLAPMNSVFKDGTPRIDARTKNLLLNHMIKDQLASKYLYHGQT 721
FRQAGL SHLSGNERLTLLAPMNSVFKDGTP I+ARTKNLLLNHMIKDQLASKYLYHGQT
Sbjct: 395 FRQAGLSSHLSGNERLTLLAPMNSVFKDGTPPINARTKNLLLNHMIKDQLASKYLYHGQT 454
Query: 722 LDTLGGKKLRVFVYRNSLCIENSCIAAHDKRGRYGTLFTMDRMLTPPMGTVMDVLKGDNR 901
LDTLGG+KLRVFVYRNSLCIENSCIAAHDKRGRYGTLFTMDRMLTPPMGTVMDVLKGDNR
Sbjct: 455 LDTLGGRKLRVFVYRNSLCIENSCIAAHDKRGRYGTLFTMDRMLTPPMGTVMDVLKGDNR 514
Query: 902 FSMLVAAIQSAGLTETLNREGVYTVFAPTNEAFQALPLGERNKLLGNAKELANILKYHVG 1081
FSMLVAAIQSAGLTETLNREGVYTVFAPTNEAFQALP GE NKL+GNAKELANILKYHVG
Sbjct: 515 FSMLVAAIQSAGLTETLNREGVYTVFAPTNEAFQALPRGELNKLMGNAKELANILKYHVG 574
Query: 1082 DEILVSGGIGALVRLKSLQGDKLEVSSKNSLVTVNKEPVAEADIMATNGVVHTINTVLRP 1261
DEILVSGGIGALVRLKSLQGDKLEVSSKN++V+VNKEPVAE DIMATNGVVH I++VL+P
Sbjct: 575 DEILVSGGIGALVRLKSLQGDKLEVSSKNNVVSVNKEPVAEVDIMATNGVVHAISSVLQP 634
Query: 1262 PANKPQERGDELADSALEIFKQASAFSRATQSSVKLAPVYQRLLERMKH 1408
PAN+PQERGDELADSALEIFKQASAFSRATQSSVKLAPVYQRLLERMKH
Sbjct: 635 PANRPQERGDELADSALEIFKQASAFSRATQSSVKLAPVYQRLLERMKH 683
Score = 104 bits (260), Expect = 3e-22
Identities = 99/387 (25%), Positives = 174/387 (44%), Gaps = 20/387 (5%)
Frame = +2
Query: 164 LEGDGQYTLLAPTNEAFEKIPAETLNRILGDPE-ALRDLLNNHILKSAMCAEAI---VAX 331
+EG G +T+ AP+NEA+ +PAE L+ ++ + L + L H++ + + + +A
Sbjct: 132 MEGPGSFTIFAPSNEAWSSLPAEVLDSLVSNVNIELLNALRYHMVDRRVLTDELKHGMAL 191
Query: 332 XXXXXXXXXXXXXXCSGDMLTINGKPIISNKDVLAINGVIHFIDELL--IPDSAKTLFEL 505
+G ++T+N ++ D A NGV+H ID+++ + ++ + + E+
Sbjct: 192 TSMYQNSNIQIHHYPNG-IVTVNCARLL-KADHHATNGVVHLIDKVISTVTNNIQQIIEI 249
Query: 506 AAESDVSTAVDLFRQAGLGSHLSGNERLTLLAPMNSVFKDGTPRIDARTKN--------- 658
E T +GL + L G+ + TLLAP N F+ +I A T N
Sbjct: 250 --EDTFETLRAAVAASGLNTLLEGDGQYTLLAPTNEAFE----KIPAETLNRILGDPEAL 303
Query: 659 --LLLNHMIKDQLASKYLYHGQTLDTLGGKKLRVFVYRNSLCIENSCIAAH-DKRGRYGT 829
LL NH++K + ++ + G +L+TL G L V + L I I ++ D G
Sbjct: 304 RDLLNNHILKSAMCAEAIVAGLSLETLEGTTLEVGCSGDMLTINGKPIISNKDVLATNGV 363
Query: 830 LFTMDRMLTPPMGTVMDVLKGDNRFSMLVAAIQSAGLTETLNREGVYTVFAPTNEAFQ-- 1003
+ +D +L P + L D+ S + + AGL+ L+ T+ AP N F+
Sbjct: 364 IHFIDELLIPDSAKTLFELAADSDVSTAIDLFRQAGLSSHLSGNERLTLLAPMNSVFKDG 423
Query: 1004 ALPLGERNKLLGNAKELANILKYHVGDEILVSGGIGALVRLKSLQGDKLEVSSKNSLVTV 1183
P+ R K N+L H+ + L S + L +L G KL V + + +
Sbjct: 424 TPPINARTK---------NLLLNHMIKDQLASKYLYHGQTLDTLGGRKLRVFVYRNSLCI 474
Query: 1184 NKEPVAEADIMATNGVVHTINTVLRPP 1264
+A D G + T++ +L PP
Sbjct: 475 ENSCIAAHDKRGRYGTLFTMDRMLTPP 501
Score = 65.1 bits (157), Expect = 2e-10
Identities = 44/121 (36%), Positives = 68/121 (56%), Gaps = 7/121 (5%)
Frame = +2
Query: 941 TETLNRE----GVYTVFAPTNEAFQALPLGERNKLLGNAK-ELANILKYHVGDEILVSGG 1105
TE L E G +T+FAP+NEA+ +LP + L+ N EL N L+YH+ D +++
Sbjct: 125 TEKLRPEMEGPGSFTIFAPSNEAWSSLPAEVLDSLVSNVNIELLNALRYHMVDRRVLTDE 184
Query: 1106 IGALVRLKSL-QGDKLEVSS-KNSLVTVNKEPVAEADIMATNGVVHTINTVLRPPANKPQ 1279
+ + L S+ Q +++ N +VTVN + +AD ATNGVVH I+ V+ N Q
Sbjct: 185 LKHGMALTSMYQNSNIQIHHYPNGIVTVNCARLLKADHHATNGVVHLIDKVISTVTNNIQ 244
Query: 1280 E 1282
+
Sbjct: 245 Q 245
>ref|NP_001035569.1| periostin [Bos taurus].
Length = 779
Score = 325 bits (832), Expect = 1e-88
Identities = 172/423 (40%), Positives = 254/423 (60%), Gaps = 3/423 (0%)
Frame = +2
Query: 2 ARLLKADHHATNGVVHLIDKVISTVTNNIQQIIEIEDTFETLRAAVAASGLNTLLEGDGQ 181
AR++ + ATNGVVH+ID+V++ + +IQ IE ED + RAA S + L DG
Sbjct: 209 ARIIHGNQIATNGVVHVIDRVLTQIGTSIQDFIEAEDELSSFRAAAITSDILETLGRDGH 268
Query: 182 YTLLAPTNEAFEKIPAETLNRILGDPEALRDLLNNHILKSAMCAEAIVAXXXXXXXXXXX 361
+TL APTNEAFEK+P L RI+GD A L+ HIL + C+EAI+
Sbjct: 269 FTLFAPTNEAFEKLPRGVLERIMGDKVASEALMKYHILNTLQCSEAIMGGAVFETLEGNT 328
Query: 362 XXXXCSGDMLTINGKPIISNKDVLAINGVIHFIDELLIPDSAKTLFELAAESDVSTAVDL 541
C GD +T+NG +++ KD++ NGVIH ID++L+PDSAK + ELA +T DL
Sbjct: 329 IEIGCDGDSITVNGIKMVNKKDIVTNNGVIHLIDQVLVPDSAKQVIELAGNQQ-TTFTDL 387
Query: 542 FRQAGLGSHLSGNERLTLLAPMNSVFKDGTPRIDARTKNLLL-NHMIKDQLASKYLYHGQ 718
Q GL S L + TLLAP+N+ F D T +D R L+L NH++K ++ LY+GQ
Sbjct: 388 VAQLGLASALRPDGEYTLLAPVNNAFSDDTLSMDQRLLKLILQNHILKVKIGLNELYNGQ 447
Query: 719 TLDTLGGKKLRVFVYRNSLCIENSCIAAHDKRGRYGTLFTMDRMLTPPMGTVMDVLKGDN 898
L+T+GGK+LRVFVYR ++CIENSC+ K+GR G + ++ P ++ + LK D
Sbjct: 448 KLETIGGKQLRVFVYRTAVCIENSCMVRGSKQGRNGAIHIFQEIIKPAEKSLHEKLKQDK 507
Query: 899 RFSMLVAAIQSAGLTETLNREGVYTVFAPTNEAFQALPLGERNKLLGNAKELANILKYHV 1078
RFS+ ++ +++A L E L + G +T+F PTN+AF+ + E+ L+ + L NI+ YH+
Sbjct: 508 RFSIFLSLLEAADLKELLTQPGDWTLFVPTNDAFKGMTNEEKEILIRDKNALQNIILYHL 567
Query: 1079 GDEILVSGGI--GALVRLKSLQGDKLEVSSKNSLVTVNKEPVAEADIMATNGVVHTINTV 1252
+ + G G LK+ QG K+ + N + VN+ E+DIM TNGV+H ++ +
Sbjct: 568 TPGVFIGKGFEPGVTNILKTTQGSKIYLKGVNDTLLVNELKSKESDIMTTNGVIHVVDKL 627
Query: 1253 LRP 1261
L P
Sbjct: 628 LYP 630
Score = 87.0 bits (214), Expect = 6e-17
Identities = 91/397 (22%), Positives = 165/397 (41%), Gaps = 17/397 (4%)
Frame = +2
Query: 146 SGLNTLLEGDGQYTLLAPTNEAFEKIPAETLNRILGDPEA-LRDLLNNHILKSAMCAEAI 322
S L +EG G +T AP+NEA++ + ++ + + L + L++H++ M + +
Sbjct: 120 SKLREEIEGKGSFTYFAPSNEAWDNLDSDIRRGLESNVNVELLNALHSHMVNKRMLTKDL 179
Query: 323 V--AXXXXXXXXXXXXXXXCSGDMLTINGKPIISNKDVLAINGVIHFIDELLIPDSAKTL 496
++T+N II + A NGV+H ID +L
Sbjct: 180 KNGMIIPSMYNNLGLFINHYPNGVVTVNCARIIHGNQI-ATNGVVHVIDRVLTQIGTSIQ 238
Query: 497 FELAAESDVSTAVDLFRQAGLGSH----LSGNERLTLLAPMNSVFKDGTPRIDAR----- 649
+ AE ++S+ FR A + S L + TL AP N F+ + R
Sbjct: 239 DFIEAEDELSS----FRAAAITSDILETLGRDGHFTLFAPTNEAFEKLPRGVLERIMGDK 294
Query: 650 --TKNLLLNHMIKDQLASKYLYHGQTLDTLGGKKLRVFVYRNSLCIEN-SCIAAHDKRGR 820
++ L+ H++ S+ + G +TL G + + +S+ + + D
Sbjct: 295 VASEALMKYHILNTLQCSEAIMGGAVFETLEGNTIEIGCDGDSITVNGIKMVNKKDIVTN 354
Query: 821 YGTLFTMDRMLTPPMGTVMDVLKGDNR--FSMLVAAIQSAGLTETLNREGVYTVFAPTNE 994
G + +D++L P + L G+ + F+ LVA + GL L +G YT+ AP N
Sbjct: 355 NGVIHLIDQVLVPDSAKQVIELAGNQQTTFTDLVAQL---GLASALRPDGEYTLLAPVNN 411
Query: 995 AFQALPLGERNKLLGNAKELANILKYHVGDEILVSGGIGALVRLKSLQGDKLEVSSKNSL 1174
AF L +LL + +ILK +G L +G +L+++ G +L V +
Sbjct: 412 AFSDDTLSMDQRLLKLILQ-NHILKVKIGLNELYNG-----QKLETIGGKQLRVFVYRTA 465
Query: 1175 VTVNKEPVAEADIMATNGVVHTINTVLRPPANKPQER 1285
V + + NG +H +++P E+
Sbjct: 466 VCIENSCMVRGSKQGRNGAIHIFQEIIKPAEKSLHEK 502
>ref|NP_001192499.1| stabilin-1 [Bos taurus].
Length = 2568
Score = 60.8 bits (146), Expect = 4e-09
Identities = 55/187 (29%), Positives = 88/187 (47%), Gaps = 17/187 (9%)
Frame = +2
Query: 860 PMGTVMDVLKGDNRFSMLVAAIQSAGLTETLNREGVYTVFAPTNEAFQALPLGERNKLL- 1036
P T+ +L + FS +++ GL L+ G +TVFAP+NEA L G L
Sbjct: 502 PKRTIGQILASNEVFSRFETILENCGLPSFLDGPGPFTVFAPSNEAVDGLRDGRLVYLFT 561
Query: 1037 GNAKELANILKYHVGD------EILVSGGIGALVRLKSLQGDKLEVS-SKNSLVTVNKE- 1192
+L +++YHV + E L+S G R+ ++ L V+ S+ + + E
Sbjct: 562 AGLSKLQELVRYHVYNHGQLTVEKLLSKG-----RVLTMANQILAVNISEEGRILLGPEG 616
Query: 1193 -PVAEADIMATNGVVHTINTVLRPPANKP-------QERGDELADSALEIFKQASAFSRA 1348
P+ D++A NGV+H + VL PP P +E+ +A S ++ QA S
Sbjct: 617 VPLRRVDVLAANGVIHMLEGVLLPPTILPILPKLCNEEQHAVVAGSCVDC--QALNTSTC 674
Query: 1349 TQSSVKL 1369
+SVKL
Sbjct: 675 PPNSVKL 681
Score = 50.1 bits (118), Expect = 7e-06
Identities = 50/220 (22%), Positives = 88/220 (40%), Gaps = 13/220 (5%)
Frame = +2
Query: 14 KADHHATNGVVHLID--------KVISTVTNNIQQIIEIEDTFETLRAAVAASGLNTLLE 169
KA++ A NG+ H++ ++ I QI+ + F + GL + L+
Sbjct: 474 KANYPAANGLFHVVTALRLQPPPELPEDPKRTIGQILASNEVFSRFETILENCGLPSFLD 533
Query: 170 GDGQYTLLAPTNEAFEKI-PAETLNRILGDPEALRDLLNNHILK-SAMCAEAIVAXXXXX 343
G G +T+ AP+NEA + + + L++L+ H+ + E +++
Sbjct: 534 GPGPFTVFAPSNEAVDGLRDGRLVYLFTAGLSKLQELVRYHVYNHGQLTVEKLLSKGRVL 593
Query: 344 XXXXXXXXXXCSGD---MLTINGKPIISNKDVLAINGVIHFIDELLIPDSAKTLFELAAE 514
S + +L G P + DVLA NGVIH ++ +L+P + +
Sbjct: 594 TMANQILAVNISEEGRILLGPEGVP-LRRVDVLAANGVIHMLEGVLLPPTILPILPKLCN 652
Query: 515 SDVSTAVDLFRQAGLGSHLSGNERLTLLAPMNSVFKDGTP 634
+ V GS + T P NSV D +P
Sbjct: 653 EEQHAVV-------AGSCVDCQALNTSTCPPNSVKLDISP 685
>ref|XP_002697066.1| PREDICTED: stabilin-2-like [Bos taurus].
Length = 2568
Score = 60.8 bits (146), Expect = 4e-09
Identities = 55/187 (29%), Positives = 88/187 (47%), Gaps = 17/187 (9%)
Frame = +2
Query: 860 PMGTVMDVLKGDNRFSMLVAAIQSAGLTETLNREGVYTVFAPTNEAFQALPLGERNKLL- 1036
P T+ +L + FS +++ GL L+ G +TVFAP+NEA L G L
Sbjct: 502 PKRTIGQILASNEVFSRFETILENCGLPSFLDGPGPFTVFAPSNEAVDGLRDGRLVYLFT 561
Query: 1037 GNAKELANILKYHVGD------EILVSGGIGALVRLKSLQGDKLEVS-SKNSLVTVNKE- 1192
+L +++YHV + E L+S G R+ ++ L V+ S+ + + E
Sbjct: 562 AGLSKLQELVRYHVYNHGQLTVEKLLSKG-----RVLTMANQILAVNISEEGRILLGPEG 616
Query: 1193 -PVAEADIMATNGVVHTINTVLRPPANKP-------QERGDELADSALEIFKQASAFSRA 1348
P+ D++A NGV+H + VL PP P +E+ +A S ++ QA S
Sbjct: 617 VPLRRVDVLAANGVIHMLEGVLLPPTILPILPKLCNEEQHAVVAGSCVDC--QALNTSTC 674
Query: 1349 TQSSVKL 1369
+SVKL
Sbjct: 675 PPNSVKL 681
Score = 50.1 bits (118), Expect = 7e-06
Identities = 50/220 (22%), Positives = 88/220 (40%), Gaps = 13/220 (5%)
Frame = +2
Query: 14 KADHHATNGVVHLID--------KVISTVTNNIQQIIEIEDTFETLRAAVAASGLNTLLE 169
KA++ A NG+ H++ ++ I QI+ + F + GL + L+
Sbjct: 474 KANYPAANGLFHVVTALRLQPPPELPEDPKRTIGQILASNEVFSRFETILENCGLPSFLD 533
Query: 170 GDGQYTLLAPTNEAFEKI-PAETLNRILGDPEALRDLLNNHILK-SAMCAEAIVAXXXXX 343
G G +T+ AP+NEA + + + L++L+ H+ + E +++
Sbjct: 534 GPGPFTVFAPSNEAVDGLRDGRLVYLFTAGLSKLQELVRYHVYNHGQLTVEKLLSKGRVL 593
Query: 344 XXXXXXXXXXCSGD---MLTINGKPIISNKDVLAINGVIHFIDELLIPDSAKTLFELAAE 514
S + +L G P + DVLA NGVIH ++ +L+P + +
Sbjct: 594 TMANQILAVNISEEGRILLGPEGVP-LRRVDVLAANGVIHMLEGVLLPPTILPILPKLCN 652
Query: 515 SDVSTAVDLFRQAGLGSHLSGNERLTLLAPMNSVFKDGTP 634
+ V GS + T P NSV D +P
Sbjct: 653 EEQHAVV-------AGSCVDCQALNTSTCPPNSVKLDISP 685
>ref|NP_001193608.1| hyaluronan receptor for endocytosis-like [Bos taurus].
Length = 2549
Score = 53.9 bits (128), Expect = 5e-07
Identities = 52/232 (22%), Positives = 107/232 (46%), Gaps = 30/232 (12%)
Frame = +2
Query: 671 HMIKDQLASKYLYHGQTLDTLGGK-------------KLRVFVYRNSLCIENSCIAAHDK 811
H+I Q++++ + + T TL GK KL+++ + ++ I I A +
Sbjct: 436 HIIAGQMSTEQMNNTDTFYTLTGKSGEIFSEDKDNQLKLKLYGSKKTVKIIQGNILASN- 494
Query: 812 RGRYGTLFTMDRMLTPPMGT--------VMDVLKGDNRFSMLVAAIQSAGLTETLNREGV 967
G L +DR + + T +M +L+ R+S + ++ + LN +GV
Sbjct: 495 ----GLLHILDRAMDKVVPTFESNTEQTIMTMLQP--RYSKFRSLLEKTSVGHALNEDGV 548
Query: 968 ---YTVFAPTNEAFQALPLGERNKLLGN--AKELANILKYHVGDEILVSGGIGALVRLKS 1132
YTVF P++EA + G + LL + +++L +++YH+ + + L+
Sbjct: 549 GGPYTVFVPSDEALNNMKDGTLDYLLSSEGSRKLLELIRYHIVPFTQLE--VATLISTPH 606
Query: 1133 LQGDKLEV----SSKNSLVTVNKEPVAEADIMATNGVVHTINTVLRPPANKP 1276
++ ++ ++ N + N + E ++ A NG ++T+ VL PP+ P
Sbjct: 607 IRSMANQIIRFNTTNNGQILANGVALEEMEVAAKNGRIYTLTGVLIPPSIIP 658
>ref|XP_606270.3| PREDICTED: stabilin 2, partial [Bos taurus].
Length = 1280
Score = 53.9 bits (128), Expect = 5e-07
Identities = 52/232 (22%), Positives = 107/232 (46%), Gaps = 30/232 (12%)
Frame = +2
Query: 671 HMIKDQLASKYLYHGQTLDTLGGK-------------KLRVFVYRNSLCIENSCIAAHDK 811
H+I Q++++ + + T TL GK KL+++ + ++ I I A +
Sbjct: 436 HIIAGQMSTEQMNNTDTFYTLTGKSGEIFSEDKDNQLKLKLYGSKKTVKIIQGNILASN- 494
Query: 812 RGRYGTLFTMDRMLTPPMGT--------VMDVLKGDNRFSMLVAAIQSAGLTETLNREGV 967
G L +DR + + T +M +L+ R+S + ++ + LN +GV
Sbjct: 495 ----GLLHILDRAMDKVVPTFESNTEQTIMTMLQP--RYSKFRSLLEKTSVGHALNEDGV 548
Query: 968 ---YTVFAPTNEAFQALPLGERNKLLGN--AKELANILKYHVGDEILVSGGIGALVRLKS 1132
YTVF P++EA + G + LL + +++L +++YH+ + + L+
Sbjct: 549 GGPYTVFVPSDEALNNMKDGTLDYLLSSEGSRKLLELIRYHIVPFTQLE--VATLISTPH 606
Query: 1133 LQGDKLEV----SSKNSLVTVNKEPVAEADIMATNGVVHTINTVLRPPANKP 1276
++ ++ ++ N + N + E ++ A NG ++T+ VL PP+ P
Sbjct: 607 IRSMANQIIRFNTTNNGQILANGVALEEMEVAAKNGRIYTLTGVLIPPSIIP 658
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 78,524,646
Number of extensions: 2219401
Number of successful extensions: 6770
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 6729
Number of HSP's successfully gapped: 11
Length of query: 670
Length of database: 17,681,374
Length adjustment: 109
Effective length of query: 561
Effective length of database: 14,074,782
Effective search space: 7895952702
Effective search space used: 7895952702
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-001413
(2012 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_538640.2| PREDICTED: similar to Transforming growth facto... 827 0.0
Alignment gi|XP_856355.1| PREDICTED: similar to osteoblast specific facto... 322 6e-88
Alignment gi|XP_856272.1| PREDICTED: similar to Periostin precursor (PN) ... 322 6e-88
Alignment gi|XP_534490.2| PREDICTED: similar to Periostin precursor (PN) ... 322 6e-88
Alignment gi|XP_856313.1| PREDICTED: similar to Periostin precursor (PN) ... 196 9e-50
Alignment gi|XP_541851.2| PREDICTED: similar to Stabilin-1 precursor (FEE... 63 1e-09
>ref|XP_538640.2| PREDICTED: similar to Transforming growth factor-beta induced protein
IG-H3 precursor (Beta IG-H3) (Kerato-epithelin)
(RGD-containing collagen associated protein) (RGD-CAP)
[Canis familiaris].
Length = 661
Score = 827 bits (2135), Expect = 0.0
Identities = 426/469 (90%), Positives = 441/469 (94%)
Frame = +2
Query: 2 ARLLKADHHATNGVVHLIDKVISTVTNNIQQIIEIEDTFETLRAAVAASGLNTLLEGDGQ 181
ARLLKADHHATNGVVHLIDKVIST+TNNIQQIIEIEDTFETLRAAVAASGLNTLLEGDGQ
Sbjct: 193 ARLLKADHHATNGVVHLIDKVISTITNNIQQIIEIEDTFETLRAAVAASGLNTLLEGDGQ 252
Query: 182 YTLLAPTNEAFEKIPAETLNRILGDPEALRDLLNNHILKSAMCAEAIVAXXXXXXXXXXX 361
+TLLAPTNEAFEKIPAETLNRILGDPEALRDLLNNHILKSAMCAEAIVA
Sbjct: 253 FTLLAPTNEAFEKIPAETLNRILGDPEALRDLLNNHILKSAMCAEAIVAGMSVETLEGTT 312
Query: 362 XXXXCSGDMLTINGKPIISNKDVLAINGVIHFIDELLIPDSAKTLFELAAESDVSTAVDL 541
CSGDMLTINGK IISNKDVLA NGVIHFIDELLIPDSAKTLFELAAESDVSTAVDL
Sbjct: 313 LEVGCSGDMLTINGKAIISNKDVLATNGVIHFIDELLIPDSAKTLFELAAESDVSTAVDL 372
Query: 542 FRQAGLGSHLSGNERLTLLAPMNSVFKDGTPRIDARTKNLLLNHMIKDQLASKYLYHGQT 721
FRQAGLG HLSG ERLTLLAP+NSVFKDGTP IDARTKNLLLNHMIKDQLASKYLYHGQT
Sbjct: 373 FRQAGLGVHLSGKERLTLLAPLNSVFKDGTPTIDARTKNLLLNHMIKDQLASKYLYHGQT 432
Query: 722 LDTLGGKKLRVFVYRNSLCIENSCIAAHDKRGRYGTLFTMDRMLTPPMGTVMDVLKGDNR 901
LDTLGGKKLRVFVYRNSLCIENSCIAAHDKRGRYGTLFTMDRMLTPPMGTVMDVLKGDNR
Sbjct: 433 LDTLGGKKLRVFVYRNSLCIENSCIAAHDKRGRYGTLFTMDRMLTPPMGTVMDVLKGDNR 492
Query: 902 FSMLVAAIQSAGLTETLNREGVYTVFAPTNEAFQALPLGERNKLLGNAKELANILKYHVG 1081
FSMLVAAIQSAGLTE LNREGVYTVFAPTNEAFQA+P GE NKLLGNAKELANILKYH+G
Sbjct: 493 FSMLVAAIQSAGLTEMLNREGVYTVFAPTNEAFQAMPPGELNKLLGNAKELANILKYHIG 552
Query: 1082 DEILVSGGIGALVRLKSLQGDKLEVSSKNSLVTVNKEPVAEADIMATNGVVHTINTVLRP 1261
DEILVSGGIGALVRLKSLQGDKLEVSSKN++V VNKEPVAE DIMATNGVV+ I++VL+P
Sbjct: 553 DEILVSGGIGALVRLKSLQGDKLEVSSKNNVVNVNKEPVAEVDIMATNGVVYAISSVLQP 612
Query: 1262 PANKPQERGDELADSALEIFKQASAFSRATQSSVKLAPVYQRLLERMKH 1408
PA +PQERGDELADSALEIF+QASA+SRA Q+SVKLAPVYQRLLERMKH
Sbjct: 613 PAVRPQERGDELADSALEIFRQASAYSRAAQTSVKLAPVYQRLLERMKH 661
Score = 100 bits (249), Expect = 5e-21
Identities = 98/387 (25%), Positives = 173/387 (44%), Gaps = 20/387 (5%)
Frame = +2
Query: 164 LEGDGQYTLLAPTNEAFEKIPAETLNRILGDPE-ALRDLLNNHILKSAMCAEAI---VAX 331
+EG G +T+ AP+NEA+ +PAE L+ ++ + L + L H++ + + + +A
Sbjct: 110 MEGPGSFTIFAPSNEAWASLPAEVLDSLVSNVNIELLNALRYHMVNRRVLTDELKHGMAL 169
Query: 332 XXXXXXXXXXXXXXCSGDMLTINGKPIISNKDVLAINGVIHFIDELL--IPDSAKTLFEL 505
+G ++T+N ++ D A NGV+H ID+++ I ++ + + E+
Sbjct: 170 TSMYQNSGIQIHHYPNG-IVTVNCARLL-KADHHATNGVVHLIDKVISTITNNIQQIIEI 227
Query: 506 AAESDVSTAVDLFRQAGLGSHLSGNERLTLLAPMNSVFKDGTPRIDARTKN--------- 658
E T +GL + L G+ + TLLAP N F+ +I A T N
Sbjct: 228 --EDTFETLRAAVAASGLNTLLEGDGQFTLLAPTNEAFE----KIPAETLNRILGDPEAL 281
Query: 659 --LLLNHMIKDQLASKYLYHGQTLDTLGGKKLRVFVYRNSLCIENSCIAAH-DKRGRYGT 829
LL NH++K + ++ + G +++TL G L V + L I I ++ D G
Sbjct: 282 RDLLNNHILKSAMCAEAIVAGMSVETLEGTTLEVGCSGDMLTINGKAIISNKDVLATNGV 341
Query: 830 LFTMDRMLTPPMGTVMDVLKGDNRFSMLVAAIQSAGLTETLNREGVYTVFAPTNEAFQ-- 1003
+ +D +L P + L ++ S V + AGL L+ + T+ AP N F+
Sbjct: 342 IHFIDELLIPDSAKTLFELAAESDVSTAVDLFRQAGLGVHLSGKERLTLLAPLNSVFKDG 401
Query: 1004 ALPLGERNKLLGNAKELANILKYHVGDEILVSGGIGALVRLKSLQGDKLEVSSKNSLVTV 1183
+ R K N+L H+ + L S + L +L G KL V + + +
Sbjct: 402 TPTIDARTK---------NLLLNHMIKDQLASKYLYHGQTLDTLGGKKLRVFVYRNSLCI 452
Query: 1184 NKEPVAEADIMATNGVVHTINTVLRPP 1264
+A D G + T++ +L PP
Sbjct: 453 ENSCIAAHDKRGRYGTLFTMDRMLTPP 479
Score = 61.6 bits (148), Expect = 3e-09
Identities = 43/121 (35%), Positives = 68/121 (56%), Gaps = 7/121 (5%)
Frame = +2
Query: 941 TETLNRE----GVYTVFAPTNEAFQALPLGERNKLLGNAK-ELANILKYHVGDEILVSGG 1105
TE L E G +T+FAP+NEA+ +LP + L+ N EL N L+YH+ + +++
Sbjct: 103 TEKLRPEMEGPGSFTIFAPSNEAWASLPAEVLDSLVSNVNIELLNALRYHMVNRRVLTDE 162
Query: 1106 IGALVRLKSL-QGDKLEVSS-KNSLVTVNKEPVAEADIMATNGVVHTINTVLRPPANKPQ 1279
+ + L S+ Q +++ N +VTVN + +AD ATNGVVH I+ V+ N Q
Sbjct: 163 LKHGMALTSMYQNSGIQIHHYPNGIVTVNCARLLKADHHATNGVVHLIDKVISTITNNIQ 222
Query: 1280 E 1282
+
Sbjct: 223 Q 223
>ref|XP_856355.1| PREDICTED: similar to osteoblast specific factor 2 (fasciclin I-like)
isoform 4 [Canis familiaris].
Length = 779
Score = 322 bits (826), Expect = 6e-88
Identities = 172/423 (40%), Positives = 253/423 (59%), Gaps = 3/423 (0%)
Frame = +2
Query: 2 ARLLKADHHATNGVVHLIDKVISTVTNNIQQIIEIEDTFETLRAAVAASGLNTLLEGDGQ 181
AR++ + ATNGVVH+ID+V++ + +IQ IE ED + RAA S + L DG
Sbjct: 209 ARIIHGNQIATNGVVHVIDRVLTQIGTSIQDFIEAEDDLSSFRAAAITSDILESLGRDGH 268
Query: 182 YTLLAPTNEAFEKIPAETLNRILGDPEALRDLLNNHILKSAMCAEAIVAXXXXXXXXXXX 361
+TL APTNEAFEK+P L RI+GD A L+ H+L + C+EAI+
Sbjct: 269 FTLFAPTNEAFEKLPRGVLERIMGDKVASEALMKYHLLNTLQCSEAIMGGAVFETLEGNT 328
Query: 362 XXXXCSGDMLTINGKPIISNKDVLAINGVIHFIDELLIPDSAKTLFELAAESDVSTAVDL 541
C GD +T+NG +++ KD++ NGVIH ID++LIPDSAK + ELA +T DL
Sbjct: 329 IEIGCDGDSITVNGIKMVNKKDIVTNNGVIHLIDQVLIPDSAKQVIELAGNQQ-TTFTDL 387
Query: 542 FRQAGLGSHLSGNERLTLLAPMNSVFKDGTPRIDARTKNLLL-NHMIKDQLASKYLYHGQ 718
Q GL S L + TLLAP+N+ F D T +D R L+L NH++K ++ LY+GQ
Sbjct: 388 VAQLGLASALRPDGEYTLLAPVNNAFSDDTLSMDQRLLKLILQNHILKVKVGLNELYNGQ 447
Query: 719 TLDTLGGKKLRVFVYRNSLCIENSCIAAHDKRGRYGTLFTMDRMLTPPMGTVMDVLKGDN 898
L+T+GGK+LRVFVYR ++CIENSC+ K+GR G + ++ P ++ + LK D
Sbjct: 448 KLETIGGKQLRVFVYRTAVCIENSCMVRGSKQGRNGAIHIFREIIKPAEKSLHEQLKQDK 507
Query: 899 RFSMLVAAIQSAGLTETLNREGVYTVFAPTNEAFQALPLGERNKLLGNAKELANILKYHV 1078
RFS ++ +++A L E L + G +T+F PTN+AF+ + E+ L+ + L NI+ YH+
Sbjct: 508 RFSTFLSLLEAADLKELLTQPGDWTLFVPTNDAFKGMTNEEKEILIRDKNALQNIILYHL 567
Query: 1079 GDEILVSGGI--GALVRLKSLQGDKLEVSSKNSLVTVNKEPVAEADIMATNGVVHTINTV 1252
+ + G G LK+ QG K+ + N + VN+ E+DIM TNGV+H ++ +
Sbjct: 568 TPGVFIGKGFEPGVTNILKTTQGSKIYLKGVNDTLLVNEVKSKESDIMTTNGVIHVVDKL 627
Query: 1253 LRP 1261
L P
Sbjct: 628 LYP 630
Score = 89.4 bits (220), Expect = 1e-17
Identities = 98/422 (23%), Positives = 175/422 (41%), Gaps = 19/422 (4%)
Frame = +2
Query: 146 SGLNTLLEGDGQYTLLAPTNEAFEKIPAETLNRILGDPEA-LRDLLNNHILKSAMCAEAI 322
S L +EG G +T AP+NEA++ + ++ + + L + L++H++ + M + +
Sbjct: 120 SRLREEIEGKGSFTYFAPSNEAWDNLDSDIRRGLESNVNVELLNALHSHMVNNRMLTKDL 179
Query: 323 V--AXXXXXXXXXXXXXXXCSGDMLTINGKPIISNKDVLAINGVIHFIDELLIPDSAKTL 496
++T+N II + A NGV+H ID +L
Sbjct: 180 KNGMIIPSMYNNLGLFINHYPNGVVTVNCARIIHGNQI-ATNGVVHVIDRVLTQIGTSIQ 238
Query: 497 FELAAESDVSTAVDLFRQAGLGS----HLSGNERLTLLAPMNSVFKDGTPRIDAR----- 649
+ AE D+S+ FR A + S L + TL AP N F+ + R
Sbjct: 239 DFIEAEDDLSS----FRAAAITSDILESLGRDGHFTLFAPTNEAFEKLPRGVLERIMGDK 294
Query: 650 --TKNLLLNHMIKDQLASKYLYHGQTLDTLGGKKLRVFVYRNSLCIEN-SCIAAHDKRGR 820
++ L+ H++ S+ + G +TL G + + +S+ + + D
Sbjct: 295 VASEALMKYHLLNTLQCSEAIMGGAVFETLEGNTIEIGCDGDSITVNGIKMVNKKDIVTN 354
Query: 821 YGTLFTMDRMLTPPMGTVMDVLKGDNR--FSMLVAAIQSAGLTETLNREGVYTVFAPTNE 994
G + +D++L P + L G+ + F+ LVA + GL L +G YT+ AP N
Sbjct: 355 NGVIHLIDQVLIPDSAKQVIELAGNQQTTFTDLVAQL---GLASALRPDGEYTLLAPVNN 411
Query: 995 AFQALPLGERNKLLGNAKELANILKYHVGDEILVSGGIGALVRLKSLQGDKLEVSSKNSL 1174
AF L +LL + +ILK VG L +G +L+++ G +L V +
Sbjct: 412 AFSDDTLSMDQRLLKLILQ-NHILKVKVGLNELYNG-----QKLETIGGKQLRVFVYRTA 465
Query: 1175 VTVNKEPVAEADIMATNGVVHTINTVLRPPANKPQE--RGDELADSALEIFKQASAFSRA 1348
V + + NG +H +++P E + D+ + L + + A
Sbjct: 466 VCIENSCMVRGSKQGRNGAIHIFREIIKPAEKSLHEQLKQDKRFSTFLSLLEAADLKELL 525
Query: 1349 TQ 1354
TQ
Sbjct: 526 TQ 527
>ref|XP_856272.1| PREDICTED: similar to Periostin precursor (PN) (Osteoblast-specific
factor 2) (OSF-2) isoform 2 [Canis familiaris].
Length = 809
Score = 322 bits (826), Expect = 6e-88
Identities = 172/423 (40%), Positives = 253/423 (59%), Gaps = 3/423 (0%)
Frame = +2
Query: 2 ARLLKADHHATNGVVHLIDKVISTVTNNIQQIIEIEDTFETLRAAVAASGLNTLLEGDGQ 181
AR++ + ATNGVVH+ID+V++ + +IQ IE ED + RAA S + L DG
Sbjct: 209 ARIIHGNQIATNGVVHVIDRVLTQIGTSIQDFIEAEDDLSSFRAAAITSDILESLGRDGH 268
Query: 182 YTLLAPTNEAFEKIPAETLNRILGDPEALRDLLNNHILKSAMCAEAIVAXXXXXXXXXXX 361
+TL APTNEAFEK+P L RI+GD A L+ H+L + C+EAI+
Sbjct: 269 FTLFAPTNEAFEKLPRGVLERIMGDKVASEALMKYHLLNTLQCSEAIMGGAVFETLEGNT 328
Query: 362 XXXXCSGDMLTINGKPIISNKDVLAINGVIHFIDELLIPDSAKTLFELAAESDVSTAVDL 541
C GD +T+NG +++ KD++ NGVIH ID++LIPDSAK + ELA +T DL
Sbjct: 329 IEIGCDGDSITVNGIKMVNKKDIVTNNGVIHLIDQVLIPDSAKQVIELAGNQQ-TTFTDL 387
Query: 542 FRQAGLGSHLSGNERLTLLAPMNSVFKDGTPRIDARTKNLLL-NHMIKDQLASKYLYHGQ 718
Q GL S L + TLLAP+N+ F D T +D R L+L NH++K ++ LY+GQ
Sbjct: 388 VAQLGLASALRPDGEYTLLAPVNNAFSDDTLSMDQRLLKLILQNHILKVKVGLNELYNGQ 447
Query: 719 TLDTLGGKKLRVFVYRNSLCIENSCIAAHDKRGRYGTLFTMDRMLTPPMGTVMDVLKGDN 898
L+T+GGK+LRVFVYR ++CIENSC+ K+GR G + ++ P ++ + LK D
Sbjct: 448 KLETIGGKQLRVFVYRTAVCIENSCMVRGSKQGRNGAIHIFREIIKPAEKSLHEQLKQDK 507
Query: 899 RFSMLVAAIQSAGLTETLNREGVYTVFAPTNEAFQALPLGERNKLLGNAKELANILKYHV 1078
RFS ++ +++A L E L + G +T+F PTN+AF+ + E+ L+ + L NI+ YH+
Sbjct: 508 RFSTFLSLLEAADLKELLTQPGDWTLFVPTNDAFKGMTNEEKEILIRDKNALQNIILYHL 567
Query: 1079 GDEILVSGGI--GALVRLKSLQGDKLEVSSKNSLVTVNKEPVAEADIMATNGVVHTINTV 1252
+ + G G LK+ QG K+ + N + VN+ E+DIM TNGV+H ++ +
Sbjct: 568 TPGVFIGKGFEPGVTNILKTTQGSKIYLKGVNDTLLVNEVKSKESDIMTTNGVIHVVDKL 627
Query: 1253 LRP 1261
L P
Sbjct: 628 LYP 630
Score = 89.4 bits (220), Expect = 1e-17
Identities = 98/422 (23%), Positives = 175/422 (41%), Gaps = 19/422 (4%)
Frame = +2
Query: 146 SGLNTLLEGDGQYTLLAPTNEAFEKIPAETLNRILGDPEA-LRDLLNNHILKSAMCAEAI 322
S L +EG G +T AP+NEA++ + ++ + + L + L++H++ + M + +
Sbjct: 120 SRLREEIEGKGSFTYFAPSNEAWDNLDSDIRRGLESNVNVELLNALHSHMVNNRMLTKDL 179
Query: 323 V--AXXXXXXXXXXXXXXXCSGDMLTINGKPIISNKDVLAINGVIHFIDELLIPDSAKTL 496
++T+N II + A NGV+H ID +L
Sbjct: 180 KNGMIIPSMYNNLGLFINHYPNGVVTVNCARIIHGNQI-ATNGVVHVIDRVLTQIGTSIQ 238
Query: 497 FELAAESDVSTAVDLFRQAGLGS----HLSGNERLTLLAPMNSVFKDGTPRIDAR----- 649
+ AE D+S+ FR A + S L + TL AP N F+ + R
Sbjct: 239 DFIEAEDDLSS----FRAAAITSDILESLGRDGHFTLFAPTNEAFEKLPRGVLERIMGDK 294
Query: 650 --TKNLLLNHMIKDQLASKYLYHGQTLDTLGGKKLRVFVYRNSLCIEN-SCIAAHDKRGR 820
++ L+ H++ S+ + G +TL G + + +S+ + + D
Sbjct: 295 VASEALMKYHLLNTLQCSEAIMGGAVFETLEGNTIEIGCDGDSITVNGIKMVNKKDIVTN 354
Query: 821 YGTLFTMDRMLTPPMGTVMDVLKGDNR--FSMLVAAIQSAGLTETLNREGVYTVFAPTNE 994
G + +D++L P + L G+ + F+ LVA + GL L +G YT+ AP N
Sbjct: 355 NGVIHLIDQVLIPDSAKQVIELAGNQQTTFTDLVAQL---GLASALRPDGEYTLLAPVNN 411
Query: 995 AFQALPLGERNKLLGNAKELANILKYHVGDEILVSGGIGALVRLKSLQGDKLEVSSKNSL 1174
AF L +LL + +ILK VG L +G +L+++ G +L V +
Sbjct: 412 AFSDDTLSMDQRLLKLILQ-NHILKVKVGLNELYNG-----QKLETIGGKQLRVFVYRTA 465
Query: 1175 VTVNKEPVAEADIMATNGVVHTINTVLRPPANKPQE--RGDELADSALEIFKQASAFSRA 1348
V + + NG +H +++P E + D+ + L + + A
Sbjct: 466 VCIENSCMVRGSKQGRNGAIHIFREIIKPAEKSLHEQLKQDKRFSTFLSLLEAADLKELL 525
Query: 1349 TQ 1354
TQ
Sbjct: 526 TQ 527
>ref|XP_534490.2| PREDICTED: similar to Periostin precursor (PN) (Osteoblast-specific
factor 2) (OSF-2) isoform 1 [Canis familiaris].
Length = 836
Score = 322 bits (826), Expect = 6e-88
Identities = 172/423 (40%), Positives = 253/423 (59%), Gaps = 3/423 (0%)
Frame = +2
Query: 2 ARLLKADHHATNGVVHLIDKVISTVTNNIQQIIEIEDTFETLRAAVAASGLNTLLEGDGQ 181
AR++ + ATNGVVH+ID+V++ + +IQ IE ED + RAA S + L DG
Sbjct: 209 ARIIHGNQIATNGVVHVIDRVLTQIGTSIQDFIEAEDDLSSFRAAAITSDILESLGRDGH 268
Query: 182 YTLLAPTNEAFEKIPAETLNRILGDPEALRDLLNNHILKSAMCAEAIVAXXXXXXXXXXX 361
+TL APTNEAFEK+P L RI+GD A L+ H+L + C+EAI+
Sbjct: 269 FTLFAPTNEAFEKLPRGVLERIMGDKVASEALMKYHLLNTLQCSEAIMGGAVFETLEGNT 328
Query: 362 XXXXCSGDMLTINGKPIISNKDVLAINGVIHFIDELLIPDSAKTLFELAAESDVSTAVDL 541
C GD +T+NG +++ KD++ NGVIH ID++LIPDSAK + ELA +T DL
Sbjct: 329 IEIGCDGDSITVNGIKMVNKKDIVTNNGVIHLIDQVLIPDSAKQVIELAGNQQ-TTFTDL 387
Query: 542 FRQAGLGSHLSGNERLTLLAPMNSVFKDGTPRIDARTKNLLL-NHMIKDQLASKYLYHGQ 718
Q GL S L + TLLAP+N+ F D T +D R L+L NH++K ++ LY+GQ
Sbjct: 388 VAQLGLASALRPDGEYTLLAPVNNAFSDDTLSMDQRLLKLILQNHILKVKVGLNELYNGQ 447
Query: 719 TLDTLGGKKLRVFVYRNSLCIENSCIAAHDKRGRYGTLFTMDRMLTPPMGTVMDVLKGDN 898
L+T+GGK+LRVFVYR ++CIENSC+ K+GR G + ++ P ++ + LK D
Sbjct: 448 KLETIGGKQLRVFVYRTAVCIENSCMVRGSKQGRNGAIHIFREIIKPAEKSLHEQLKQDK 507
Query: 899 RFSMLVAAIQSAGLTETLNREGVYTVFAPTNEAFQALPLGERNKLLGNAKELANILKYHV 1078
RFS ++ +++A L E L + G +T+F PTN+AF+ + E+ L+ + L NI+ YH+
Sbjct: 508 RFSTFLSLLEAADLKELLTQPGDWTLFVPTNDAFKGMTNEEKEILIRDKNALQNIILYHL 567
Query: 1079 GDEILVSGGI--GALVRLKSLQGDKLEVSSKNSLVTVNKEPVAEADIMATNGVVHTINTV 1252
+ + G G LK+ QG K+ + N + VN+ E+DIM TNGV+H ++ +
Sbjct: 568 TPGVFIGKGFEPGVTNILKTTQGSKIYLKGVNDTLLVNEVKSKESDIMTTNGVIHVVDKL 627
Query: 1253 LRP 1261
L P
Sbjct: 628 LYP 630
Score = 89.4 bits (220), Expect = 1e-17
Identities = 98/422 (23%), Positives = 175/422 (41%), Gaps = 19/422 (4%)
Frame = +2
Query: 146 SGLNTLLEGDGQYTLLAPTNEAFEKIPAETLNRILGDPEA-LRDLLNNHILKSAMCAEAI 322
S L +EG G +T AP+NEA++ + ++ + + L + L++H++ + M + +
Sbjct: 120 SRLREEIEGKGSFTYFAPSNEAWDNLDSDIRRGLESNVNVELLNALHSHMVNNRMLTKDL 179
Query: 323 V--AXXXXXXXXXXXXXXXCSGDMLTINGKPIISNKDVLAINGVIHFIDELLIPDSAKTL 496
++T+N II + A NGV+H ID +L
Sbjct: 180 KNGMIIPSMYNNLGLFINHYPNGVVTVNCARIIHGNQI-ATNGVVHVIDRVLTQIGTSIQ 238
Query: 497 FELAAESDVSTAVDLFRQAGLGS----HLSGNERLTLLAPMNSVFKDGTPRIDAR----- 649
+ AE D+S+ FR A + S L + TL AP N F+ + R
Sbjct: 239 DFIEAEDDLSS----FRAAAITSDILESLGRDGHFTLFAPTNEAFEKLPRGVLERIMGDK 294
Query: 650 --TKNLLLNHMIKDQLASKYLYHGQTLDTLGGKKLRVFVYRNSLCIEN-SCIAAHDKRGR 820
++ L+ H++ S+ + G +TL G + + +S+ + + D
Sbjct: 295 VASEALMKYHLLNTLQCSEAIMGGAVFETLEGNTIEIGCDGDSITVNGIKMVNKKDIVTN 354
Query: 821 YGTLFTMDRMLTPPMGTVMDVLKGDNR--FSMLVAAIQSAGLTETLNREGVYTVFAPTNE 994
G + +D++L P + L G+ + F+ LVA + GL L +G YT+ AP N
Sbjct: 355 NGVIHLIDQVLIPDSAKQVIELAGNQQTTFTDLVAQL---GLASALRPDGEYTLLAPVNN 411
Query: 995 AFQALPLGERNKLLGNAKELANILKYHVGDEILVSGGIGALVRLKSLQGDKLEVSSKNSL 1174
AF L +LL + +ILK VG L +G +L+++ G +L V +
Sbjct: 412 AFSDDTLSMDQRLLKLILQ-NHILKVKVGLNELYNG-----QKLETIGGKQLRVFVYRTA 465
Query: 1175 VTVNKEPVAEADIMATNGVVHTINTVLRPPANKPQE--RGDELADSALEIFKQASAFSRA 1348
V + + NG +H +++P E + D+ + L + + A
Sbjct: 466 VCIENSCMVRGSKQGRNGAIHIFREIIKPAEKSLHEQLKQDKRFSTFLSLLEAADLKELL 525
Query: 1349 TQ 1354
TQ
Sbjct: 526 TQ 527
>ref|XP_856313.1| PREDICTED: similar to Periostin precursor (PN) (Osteoblast-specific
factor 2) (OSF-2) isoform 3 [Canis familiaris].
Length = 721
Score = 196 bits (497), Expect = 9e-50
Identities = 130/425 (30%), Positives = 207/425 (48%), Gaps = 53/425 (12%)
Frame = +2
Query: 146 SGLNTLLEGDGQYTLLAPTNEAFEKIPAETLNRILGDPEA-LRDLLNNHILKSAMCAEAI 322
S L +EG G +T AP+NEA++ + ++ + + L + L++H++ + M + +
Sbjct: 120 SRLREEIEGKGSFTYFAPSNEAWDNLDSDIRRGLESNVNVELLNALHSHMVNNRMLTKDL 179
Query: 323 V--AXXXXXXXXXXXXXXXCSGDMLTINGKPIISNKDVLAINGVIHFIDE---------- 466
++T+N II + A NGV+H ID
Sbjct: 180 KNGMIIPSMYNNLGLFINHYPNGVVTVNCARIIHGNQI-ATNGVVHVIDRVLTQIGTSIQ 238
Query: 467 -------------------------------------LLIPDSAKTLFELAAESDVSTAV 535
LL P+ K + ELA +T
Sbjct: 239 DFIEAEDDLSSFRAAAITSDILESLGRDGHFTLFLFLLLPPELTKQVIELAGNQQ-TTFT 297
Query: 536 DLFRQAGLGSHLSGNERLTLLAPMNSVFKDGTPRIDARTKNLLL-NHMIKDQLASKYLYH 712
DL Q GL S L + TLLAP+N+ F D T +D R L+L NH++K ++ LY+
Sbjct: 298 DLVAQLGLASALRPDGEYTLLAPVNNAFSDDTLSMDQRLLKLILQNHILKVKVGLNELYN 357
Query: 713 GQTLDTLGGKKLRVFVYRNSLCIENSCIAAHDKRGRYGTLFTMDRMLTPPMGTVMDVLKG 892
GQ L+T+GGK+LRVFVYR ++CIENSC+ K+GR G + ++ P ++ + LK
Sbjct: 358 GQKLETIGGKQLRVFVYRTAVCIENSCMVRGSKQGRNGAIHIFREIIKPAEKSLHEQLKQ 417
Query: 893 DNRFSMLVAAIQSAGLTETLNREGVYTVFAPTNEAFQALPLGERNKLLGNAKELANILKY 1072
D RFS ++ +++A L E L + G +T+F PTN+AF+ + E+ L+ + L NI+ Y
Sbjct: 418 DKRFSTFLSLLEAADLKELLTQPGDWTLFVPTNDAFKGMTNEEKEILIRDKNALQNIILY 477
Query: 1073 HVGDEILVSGGI--GALVRLKSLQGDKLEVSSKNSLVTVNKEPVAEADIMATNGVVHTIN 1246
H+ + + G G LK+ QG K+ + N + VN+ E+DIM TNGV+H ++
Sbjct: 478 HLTPGVFIGKGFEPGVTNILKTTQGSKIYLKGVNDTLLVNEVKSKESDIMTTNGVIHVVD 537
Query: 1247 TVLRP 1261
+L P
Sbjct: 538 KLLYP 542
Score = 82.4 bits (202), Expect = 1e-15
Identities = 99/389 (25%), Positives = 147/389 (37%), Gaps = 60/389 (15%)
Frame = +2
Query: 2 ARLLKADHHATNGVVHLIDKVISTVTNNIQQIIEIEDTFETLRAA--------------- 136
AR++ + ATNGVVH+ID+V++ + +IQ IE ED + RAA
Sbjct: 209 ARIIHGNQIATNGVVHVIDRVLTQIGTSIQDFIEAEDDLSSFRAAAITSDILESLGRDGH 268
Query: 137 -------------------------------VAASGLNTLLEGDGQYTLLAPTNEAFEKI 223
VA GL + L DG+YTLLAP N AF
Sbjct: 269 FTLFLFLLLPPELTKQVIELAGNQQTTFTDLVAQLGLASALRPDGEYTLLAPVNNAFSD- 327
Query: 224 PAETLNRILGDPEALRDLLNNHILKSAMCAEAIVAXXXXXXXXXXXXXXXCSGDMLTING 403
+TL+ D L+ +L NHILK + + + I
Sbjct: 328 --DTLSM---DQRLLKLILQNHILKVKVGLNELYNGQKLETIGGKQLRVFVYRTAVCIEN 382
Query: 404 KPIISNKDVLAINGVIHFIDELLIPDSAKTLFELAAESDVSTAVDLFRQAGLGSHLSGNE 583
++ NG IH E++ P +L + ST + L A L L+
Sbjct: 383 SCMVRGSK-QGRNGAIHIFREIIKPAEKSLHEQLKQDKRFSTFLSLLEAADLKELLTQPG 441
Query: 584 RLTLLAPMNSVFKDGT---PRIDARTKNLLLN----HMIKDQLASKYLYHGQT--LDTLG 736
TL P N FK T I R KN L N H+ K G T L T
Sbjct: 442 DWTLFVPTNDAFKGMTNEEKEILIRDKNALQNIILYHLTPGVFIGKGFEPGVTNILKTTQ 501
Query: 737 GKKLRVFVYRNSLCIENSCIAAHDKRGRYGTLFTMDRMLTP---PMGT--VMDVLKGDNR 901
G K+ + ++L + D G + +D++L P P+G ++++L
Sbjct: 502 GSKIYLKGVNDTLLVNEVKSKESDIMTTNGVIHVVDKLLYPADTPVGNDQLLEIL----- 556
Query: 902 FSMLVAAIQSAGLTETLNREGVYTVFAPT 988
+ L+ IQ + + +E TV+ PT
Sbjct: 557 -NKLIKYIQIKFVRGSTFKEIPMTVYRPT 584
>ref|XP_541851.2| PREDICTED: similar to Stabilin-1 precursor (FEEL-1 protein) (MS-1
antigen) [Canis familiaris].
Length = 2621
Score = 62.8 bits (151), Expect = 1e-09
Identities = 52/187 (27%), Positives = 85/187 (45%), Gaps = 17/187 (9%)
Frame = +2
Query: 860 PMGTVMDVLKGDNRFSMLVAAIQSAGLTETLNREGVYTVFAPTNEAFQALPLGERNKLL- 1036
P T+ +L FS +++ GL L+ G +TVFAP+NEA L G L
Sbjct: 555 PKRTIGQILASTEAFSRFETILENCGLPSILDGPGPFTVFAPSNEAVDKLRDGRLIYLFT 614
Query: 1037 GNAKELANILKYHVGD------EILVSGGIGALVRLKSLQGDKLEVSSKNS---LVTVNK 1189
+L ++KYH+ E L+S G R+ ++ L V+ L+ +
Sbjct: 615 AGLSKLQELVKYHIYSHGQLTIEKLISKG-----RVLTMANQVLAVNISEEGRILLGPDG 669
Query: 1190 EPVAEADIMATNGVVHTINTVLRPPANKP-------QERGDELADSALEIFKQASAFSRA 1348
P+ D++A NGV+H + +L PP P +E+ + +A S ++ QA S
Sbjct: 670 APLRRVDVLAANGVIHMLEGILLPPTILPILPKHCSEEKHEMVAGSCVDC--QALNTSTC 727
Query: 1349 TQSSVKL 1369
+S+KL
Sbjct: 728 PPNSIKL 734
Score = 56.6 bits (135), Expect = 9e-08
Identities = 44/168 (26%), Positives = 76/168 (45%), Gaps = 13/168 (7%)
Frame = +2
Query: 14 KADHHATNGVVHLID--------KVISTVTNNIQQIIEIEDTFETLRAAVAASGLNTLLE 169
KA++ A NGV HL+ ++ I QI+ + F + GL ++L+
Sbjct: 527 KANYPAANGVFHLVTALQWQPPPELPEDPKRTIGQILASTEAFSRFETILENCGLPSILD 586
Query: 170 GDGQYTLLAPTNEAFEKI-PAETLNRILGDPEALRDLLNNHILK-SAMCAEAIVAXXXXX 343
G G +T+ AP+NEA +K+ + L++L+ HI + E +++
Sbjct: 587 GPGPFTVFAPSNEAVDKLRDGRLIYLFTAGLSKLQELVKYHIYSHGQLTIEKLISKGRVL 646
Query: 344 XXXXXXXXXXCSGD---MLTINGKPIISNKDVLAINGVIHFIDELLIP 478
S + +L +G P + DVLA NGVIH ++ +L+P
Sbjct: 647 TMANQVLAVNISEEGRILLGPDGAP-LRRVDVLAANGVIHMLEGILLP 693
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 82,060,971
Number of extensions: 2289960
Number of successful extensions: 7032
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 6967
Number of HSP's successfully gapped: 14
Length of query: 670
Length of database: 18,874,504
Length adjustment: 109
Effective length of query: 561
Effective length of database: 15,240,880
Effective search space: 8550133680
Effective search space used: 8550133680
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-001413
(2012 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_000349.1| transforming growth factor-beta-induced protein... 812 0.0
Alignment gi|NP_001129407.1| periostin isoform 3 [Homo sapiens]. 322 6e-88
Alignment gi|NP_001129408.1| periostin isoform 4 [Homo sapiens]. 322 8e-88
Alignment gi|NP_001129406.1| periostin isoform 2 [Homo sapiens]. 322 8e-88
Alignment gi|NP_006466.2| periostin isoform 1 [Homo sapiens]. 322 8e-88
Alignment gi|NP_055951.2| stabilin-1 precursor [Homo sapiens]. 64 5e-10
Alignment gi|NP_060034.9| stabilin-2 precursor [Homo sapiens]. 51 4e-06
>ref|NP_000349.1| transforming growth factor-beta-induced protein ig-h3 precursor [Homo
sapiens].
Length = 683
Score = 812 bits (2097), Expect = 0.0
Identities = 414/469 (88%), Positives = 441/469 (94%)
Frame = +2
Query: 2 ARLLKADHHATNGVVHLIDKVISTVTNNIQQIIEIEDTFETLRAAVAASGLNTLLEGDGQ 181
ARLLKADHHATNGVVHLIDKVIST+TNNIQQIIEIEDTFETLRAAVAASGLNT+LEG+GQ
Sbjct: 215 ARLLKADHHATNGVVHLIDKVISTITNNIQQIIEIEDTFETLRAAVAASGLNTMLEGNGQ 274
Query: 182 YTLLAPTNEAFEKIPAETLNRILGDPEALRDLLNNHILKSAMCAEAIVAXXXXXXXXXXX 361
YTLLAPTNEAFEKIP+ETLNRILGDPEALRDLLNNHILKSAMCAEAIVA
Sbjct: 275 YTLLAPTNEAFEKIPSETLNRILGDPEALRDLLNNHILKSAMCAEAIVAGLSVETLEGTT 334
Query: 362 XXXXCSGDMLTINGKPIISNKDVLAINGVIHFIDELLIPDSAKTLFELAAESDVSTAVDL 541
CSGDMLTINGK IISNKD+LA NGVIH+IDELLIPDSAKTLFELAAESDVSTA+DL
Sbjct: 335 LEVGCSGDMLTINGKAIISNKDILATNGVIHYIDELLIPDSAKTLFELAAESDVSTAIDL 394
Query: 542 FRQAGLGSHLSGNERLTLLAPMNSVFKDGTPRIDARTKNLLLNHMIKDQLASKYLYHGQT 721
FRQAGLG+HLSG+ERLTLLAP+NSVFKDGTP IDA T+NLL NH+IKDQLASKYLYHGQT
Sbjct: 395 FRQAGLGNHLSGSERLTLLAPLNSVFKDGTPPIDAHTRNLLRNHIIKDQLASKYLYHGQT 454
Query: 722 LDTLGGKKLRVFVYRNSLCIENSCIAAHDKRGRYGTLFTMDRMLTPPMGTVMDVLKGDNR 901
L+TLGGKKLRVFVYRNSLCIENSCIAAHDKRGRYGTLFTMDR+LTPPMGTVMDVLKGDNR
Sbjct: 455 LETLGGKKLRVFVYRNSLCIENSCIAAHDKRGRYGTLFTMDRVLTPPMGTVMDVLKGDNR 514
Query: 902 FSMLVAAIQSAGLTETLNREGVYTVFAPTNEAFQALPLGERNKLLGNAKELANILKYHVG 1081
FSMLVAAIQSAGLTETLNREGVYTVFAPTNEAF+ALP ER++LLG+AKELANILKYH+G
Sbjct: 515 FSMLVAAIQSAGLTETLNREGVYTVFAPTNEAFRALPPRERSRLLGDAKELANILKYHIG 574
Query: 1082 DEILVSGGIGALVRLKSLQGDKLEVSSKNSLVTVNKEPVAEADIMATNGVVHTINTVLRP 1261
DEILVSGGIGALVRLKSLQGDKLEVS KN++V+VNKEPVAE DIMATNGVVH I VL+P
Sbjct: 575 DEILVSGGIGALVRLKSLQGDKLEVSLKNNVVSVNKEPVAEPDIMATNGVVHVITNVLQP 634
Query: 1262 PANKPQERGDELADSALEIFKQASAFSRATQSSVKLAPVYQRLLERMKH 1408
PAN+PQERGDELADSALEIFKQASAFSRA+Q SV+LAPVYQ+LLERMKH
Sbjct: 635 PANRPQERGDELADSALEIFKQASAFSRASQRSVRLAPVYQKLLERMKH 683
Score = 102 bits (254), Expect = 1e-21
Identities = 95/386 (24%), Positives = 170/386 (44%), Gaps = 19/386 (4%)
Frame = +2
Query: 164 LEGDGQYTLLAPTNEAFEKIPAETLNRILGDPE-ALRDLLNNHILKSAMCAEAIV--AXX 334
+EG G +T+ AP+NEA+ +PAE L+ ++ + L + L H++ + + +
Sbjct: 132 MEGPGSFTIFAPSNEAWASLPAEVLDSLVSNVNIELLNALRYHMVGRRVLTDELKHGMTL 191
Query: 335 XXXXXXXXXXXXXCSGDMLTINGKPIISNKDVLAINGVIHFIDELL--IPDSAKTLFELA 508
++T+N ++ D A NGV+H ID+++ I ++ + + E+
Sbjct: 192 TSMYQNSNIQIHHYPNGIVTVNCARLL-KADHHATNGVVHLIDKVISTITNNIQQIIEI- 249
Query: 509 AESDVSTAVDLFRQAGLGSHLSGNERLTLLAPMNSVFKDGTPRIDARTKN---------- 658
E T +GL + L GN + TLLAP N F+ +I + T N
Sbjct: 250 -EDTFETLRAAVAASGLNTMLEGNGQYTLLAPTNEAFE----KIPSETLNRILGDPEALR 304
Query: 659 -LLLNHMIKDQLASKYLYHGQTLDTLGGKKLRVFVYRNSLCIENSCIAAH-DKRGRYGTL 832
LL NH++K + ++ + G +++TL G L V + L I I ++ D G +
Sbjct: 305 DLLNNHILKSAMCAEAIVAGLSVETLEGTTLEVGCSGDMLTINGKAIISNKDILATNGVI 364
Query: 833 FTMDRMLTPPMGTVMDVLKGDNRFSMLVAAIQSAGLTETLNREGVYTVFAPTNEAFQ--A 1006
+D +L P + L ++ S + + AGL L+ T+ AP N F+
Sbjct: 365 HYIDELLIPDSAKTLFELAAESDVSTAIDLFRQAGLGNHLSGSERLTLLAPLNSVFKDGT 424
Query: 1007 LPLGERNKLLGNAKELANILKYHVGDEILVSGGIGALVRLKSLQGDKLEVSSKNSLVTVN 1186
P+ + N+L+ H+ + L S + L++L G KL V + + +
Sbjct: 425 PPIDAHTR---------NLLRNHIIKDQLASKYLYHGQTLETLGGKKLRVFVYRNSLCIE 475
Query: 1187 KEPVAEADIMATNGVVHTINTVLRPP 1264
+A D G + T++ VL PP
Sbjct: 476 NSCIAAHDKRGRYGTLFTMDRVLTPP 501
Score = 63.2 bits (152), Expect = 9e-10
Identities = 44/121 (36%), Positives = 63/121 (52%), Gaps = 7/121 (5%)
Frame = +2
Query: 941 TETLNRE----GVYTVFAPTNEAFQALPLGERNKLLGNAK-ELANILKYH-VGDEILVSG 1102
TE L E G +T+FAP+NEA+ +LP + L+ N EL N L+YH VG +L
Sbjct: 125 TEKLRPEMEGPGSFTIFAPSNEAWASLPAEVLDSLVSNVNIELLNALRYHMVGRRVLTDE 184
Query: 1103 GIGALVRLKSLQGDKLEVSS-KNSLVTVNKEPVAEADIMATNGVVHTINTVLRPPANKPQ 1279
+ Q +++ N +VTVN + +AD ATNGVVH I+ V+ N Q
Sbjct: 185 LKHGMTLTSMYQNSNIQIHHYPNGIVTVNCARLLKADHHATNGVVHLIDKVISTITNNIQ 244
Query: 1280 E 1282
+
Sbjct: 245 Q 245
>ref|NP_001129407.1| periostin isoform 3 [Homo sapiens].
Length = 781
Score = 322 bits (826), Expect = 6e-88
Identities = 183/472 (38%), Positives = 274/472 (58%), Gaps = 4/472 (0%)
Frame = +2
Query: 2 ARLLKADHHATNGVVHLIDKVISTVTNNIQQIIEIEDTFETLRAAVAASGLNTLLEGDGQ 181
AR++ + ATNGVVH+ID+V++ + +IQ IE ED + RAA S + L DG
Sbjct: 209 ARIIHGNQIATNGVVHVIDRVLTQIGTSIQDFIEAEDDLSSFRAAAITSDILEALGRDGH 268
Query: 182 YTLLAPTNEAFEKIPAETLNRILGDPEALRDLLNNHILKSAMCAEAIVAXXXXXXXXXXX 361
+TL APTNEAFEK+P L RI+GD A L+ HIL + C+E+I+
Sbjct: 269 FTLFAPTNEAFEKLPRGVLERIMGDKVASEALMKYHILNTLQCSESIMGGAVFETLEGNT 328
Query: 362 XXXXCSGDMLTINGKPIISNKDVLAINGVIHFIDELLIPDSAKTLFELAAESDVSTAVDL 541
C GD +T+NG +++ KD++ NGVIH ID++LIPDSAK + ELA + +T DL
Sbjct: 329 IEIGCDGDSITVNGIKMVNKKDIVTNNGVIHLIDQVLIPDSAKQVIELAGKQQ-TTFTDL 387
Query: 542 FRQAGLGSHLSGNERLTLLAPMNSVFKDGTPRIDARTKNLLL-NHMIKDQLASKYLYHGQ 718
Q GL S L + TLLAP+N+ F D T +D R L+L NH++K ++ LY+GQ
Sbjct: 388 VAQLGLASALRPDGEYTLLAPVNNAFSDDTLSMDQRLLKLILQNHILKVKVGLNELYNGQ 447
Query: 719 TLDTLGGKKLRVFVYRNSLCIENSCIAAHDKRGRYGTLFTMDRMLTPPMGTVMDVLKGDN 898
L+T+GGK+LRVFVYR ++CIENSC+ K+GR G + ++ P ++ + LK D
Sbjct: 448 ILETIGGKQLRVFVYRTAVCIENSCMEKGSKQGRNGAIHIFREIIKPAEKSLHEKLKQDK 507
Query: 899 RFSMLVAAIQSAGLTETLNREGVYTVFAPTNEAFQALPLGERNKLLGNAKELANILKYHV 1078
RFS ++ +++A L E L + G +T+F PTN+AF+ + E+ L+ + L NI+ YH+
Sbjct: 508 RFSTFLSLLEAADLKELLTQPGDWTLFVPTNDAFKGMTSEEKEILIRDKNALQNIILYHL 567
Query: 1079 GDEILVSGGI--GALVRLKSLQGDKLEVSSKNSLVTVNKEPVAEADIMATNGVVHTINTV 1252
+ + G G LK+ QG K+ + N + VN+ E+DIM TNGV+H ++ +
Sbjct: 568 TPGVFIGKGFEPGVTNILKTTQGSKIFLKEVNDTLLVNELKSKESDIMTTNGVIHVVDKL 627
Query: 1253 LRPPANKPQERGDELADSALEIFKQAS-AFSRATQSSVKLAPVYQRLLERMK 1405
L PA+ P D+L + ++ K F R + VY+ L ++K
Sbjct: 628 LY-PADTP-VGNDQLLEILNKLIKYIQIKFVRGSTFKEIPVTVYRPTLTKVK 677
Score = 90.5 bits (223), Expect = 5e-18
Identities = 95/398 (23%), Positives = 166/398 (41%), Gaps = 17/398 (4%)
Frame = +2
Query: 143 ASGLNTLLEGDGQYTLLAPTNEAFEKIPAETLNRILGDPEA-LRDLLNNHILKSAMCAEA 319
AS L +EG G +T AP+NEA++ + ++ + + L + L++H++ M +
Sbjct: 119 ASKLREEIEGKGSFTYFAPSNEAWDNLDSDIRRGLESNVNVELLNALHSHMINKRMLTKD 178
Query: 320 IV--AXXXXXXXXXXXXXXXCSGDMLTINGKPIISNKDVLAINGVIHFIDELLIPDSAKT 493
+ ++T+N II + A NGV+H ID +L
Sbjct: 179 LKNGMIIPSMYNNLGLFINHYPNGVVTVNCARIIHGNQI-ATNGVVHVIDRVLTQIGTSI 237
Query: 494 LFELAAESDVSTAVDLFRQAGLGSH----LSGNERLTLLAPMNSVFKDGTPRIDAR---- 649
+ AE D+S+ FR A + S L + TL AP N F+ + R
Sbjct: 238 QDFIEAEDDLSS----FRAAAITSDILEALGRDGHFTLFAPTNEAFEKLPRGVLERIMGD 293
Query: 650 ---TKNLLLNHMIKDQLASKYLYHGQTLDTLGGKKLRVFVYRNSLCIEN-SCIAAHDKRG 817
++ L+ H++ S+ + G +TL G + + +S+ + + D
Sbjct: 294 KVASEALMKYHILNTLQCSESIMGGAVFETLEGNTIEIGCDGDSITVNGIKMVNKKDIVT 353
Query: 818 RYGTLFTMDRMLTPPMGTVMDVLKGDNR--FSMLVAAIQSAGLTETLNREGVYTVFAPTN 991
G + +D++L P + L G + F+ LVA + GL L +G YT+ AP N
Sbjct: 354 NNGVIHLIDQVLIPDSAKQVIELAGKQQTTFTDLVAQL---GLASALRPDGEYTLLAPVN 410
Query: 992 EAFQALPLGERNKLLGNAKELANILKYHVGDEILVSGGIGALVRLKSLQGDKLEVSSKNS 1171
AF L +LL + +ILK VG L +G I L+++ G +L V +
Sbjct: 411 NAFSDDTLSMDQRLLKLILQ-NHILKVKVGLNELYNGQI-----LETIGGKQLRVFVYRT 464
Query: 1172 LVTVNKEPVAEADIMATNGVVHTINTVLRPPANKPQER 1285
V + + + NG +H +++P E+
Sbjct: 465 AVCIENSCMEKGSKQGRNGAIHIFREIIKPAEKSLHEK 502
>ref|NP_001129408.1| periostin isoform 4 [Homo sapiens].
Length = 751
Score = 322 bits (825), Expect = 8e-88
Identities = 172/423 (40%), Positives = 254/423 (60%), Gaps = 3/423 (0%)
Frame = +2
Query: 2 ARLLKADHHATNGVVHLIDKVISTVTNNIQQIIEIEDTFETLRAAVAASGLNTLLEGDGQ 181
AR++ + ATNGVVH+ID+V++ + +IQ IE ED + RAA S + L DG
Sbjct: 209 ARIIHGNQIATNGVVHVIDRVLTQIGTSIQDFIEAEDDLSSFRAAAITSDILEALGRDGH 268
Query: 182 YTLLAPTNEAFEKIPAETLNRILGDPEALRDLLNNHILKSAMCAEAIVAXXXXXXXXXXX 361
+TL APTNEAFEK+P L RI+GD A L+ HIL + C+E+I+
Sbjct: 269 FTLFAPTNEAFEKLPRGVLERIMGDKVASEALMKYHILNTLQCSESIMGGAVFETLEGNT 328
Query: 362 XXXXCSGDMLTINGKPIISNKDVLAINGVIHFIDELLIPDSAKTLFELAAESDVSTAVDL 541
C GD +T+NG +++ KD++ NGVIH ID++LIPDSAK + ELA + +T DL
Sbjct: 329 IEIGCDGDSITVNGIKMVNKKDIVTNNGVIHLIDQVLIPDSAKQVIELAGKQQ-TTFTDL 387
Query: 542 FRQAGLGSHLSGNERLTLLAPMNSVFKDGTPRIDARTKNLLL-NHMIKDQLASKYLYHGQ 718
Q GL S L + TLLAP+N+ F D T +D R L+L NH++K ++ LY+GQ
Sbjct: 388 VAQLGLASALRPDGEYTLLAPVNNAFSDDTLSMDQRLLKLILQNHILKVKVGLNELYNGQ 447
Query: 719 TLDTLGGKKLRVFVYRNSLCIENSCIAAHDKRGRYGTLFTMDRMLTPPMGTVMDVLKGDN 898
L+T+GGK+LRVFVYR ++CIENSC+ K+GR G + ++ P ++ + LK D
Sbjct: 448 ILETIGGKQLRVFVYRTAVCIENSCMEKGSKQGRNGAIHIFREIIKPAEKSLHEKLKQDK 507
Query: 899 RFSMLVAAIQSAGLTETLNREGVYTVFAPTNEAFQALPLGERNKLLGNAKELANILKYHV 1078
RFS ++ +++A L E L + G +T+F PTN+AF+ + E+ L+ + L NI+ YH+
Sbjct: 508 RFSTFLSLLEAADLKELLTQPGDWTLFVPTNDAFKGMTSEEKEILIRDKNALQNIILYHL 567
Query: 1079 GDEILVSGGI--GALVRLKSLQGDKLEVSSKNSLVTVNKEPVAEADIMATNGVVHTINTV 1252
+ + G G LK+ QG K+ + N + VN+ E+DIM TNGV+H ++ +
Sbjct: 568 TPGVFIGKGFEPGVTNILKTTQGSKIFLKEVNDTLLVNELKSKESDIMTTNGVIHVVDKL 627
Query: 1253 LRP 1261
L P
Sbjct: 628 LYP 630
Score = 90.5 bits (223), Expect = 5e-18
Identities = 95/398 (23%), Positives = 166/398 (41%), Gaps = 17/398 (4%)
Frame = +2
Query: 143 ASGLNTLLEGDGQYTLLAPTNEAFEKIPAETLNRILGDPEA-LRDLLNNHILKSAMCAEA 319
AS L +EG G +T AP+NEA++ + ++ + + L + L++H++ M +
Sbjct: 119 ASKLREEIEGKGSFTYFAPSNEAWDNLDSDIRRGLESNVNVELLNALHSHMINKRMLTKD 178
Query: 320 IV--AXXXXXXXXXXXXXXXCSGDMLTINGKPIISNKDVLAINGVIHFIDELLIPDSAKT 493
+ ++T+N II + A NGV+H ID +L
Sbjct: 179 LKNGMIIPSMYNNLGLFINHYPNGVVTVNCARIIHGNQI-ATNGVVHVIDRVLTQIGTSI 237
Query: 494 LFELAAESDVSTAVDLFRQAGLGSH----LSGNERLTLLAPMNSVFKDGTPRIDAR---- 649
+ AE D+S+ FR A + S L + TL AP N F+ + R
Sbjct: 238 QDFIEAEDDLSS----FRAAAITSDILEALGRDGHFTLFAPTNEAFEKLPRGVLERIMGD 293
Query: 650 ---TKNLLLNHMIKDQLASKYLYHGQTLDTLGGKKLRVFVYRNSLCIEN-SCIAAHDKRG 817
++ L+ H++ S+ + G +TL G + + +S+ + + D
Sbjct: 294 KVASEALMKYHILNTLQCSESIMGGAVFETLEGNTIEIGCDGDSITVNGIKMVNKKDIVT 353
Query: 818 RYGTLFTMDRMLTPPMGTVMDVLKGDNR--FSMLVAAIQSAGLTETLNREGVYTVFAPTN 991
G + +D++L P + L G + F+ LVA + GL L +G YT+ AP N
Sbjct: 354 NNGVIHLIDQVLIPDSAKQVIELAGKQQTTFTDLVAQL---GLASALRPDGEYTLLAPVN 410
Query: 992 EAFQALPLGERNKLLGNAKELANILKYHVGDEILVSGGIGALVRLKSLQGDKLEVSSKNS 1171
AF L +LL + +ILK VG L +G I L+++ G +L V +
Sbjct: 411 NAFSDDTLSMDQRLLKLILQ-NHILKVKVGLNELYNGQI-----LETIGGKQLRVFVYRT 464
Query: 1172 LVTVNKEPVAEADIMATNGVVHTINTVLRPPANKPQER 1285
V + + + NG +H +++P E+
Sbjct: 465 AVCIENSCMEKGSKQGRNGAIHIFREIIKPAEKSLHEK 502
>ref|NP_001129406.1| periostin isoform 2 [Homo sapiens].
Length = 779
Score = 322 bits (825), Expect = 8e-88
Identities = 172/423 (40%), Positives = 254/423 (60%), Gaps = 3/423 (0%)
Frame = +2
Query: 2 ARLLKADHHATNGVVHLIDKVISTVTNNIQQIIEIEDTFETLRAAVAASGLNTLLEGDGQ 181
AR++ + ATNGVVH+ID+V++ + +IQ IE ED + RAA S + L DG
Sbjct: 209 ARIIHGNQIATNGVVHVIDRVLTQIGTSIQDFIEAEDDLSSFRAAAITSDILEALGRDGH 268
Query: 182 YTLLAPTNEAFEKIPAETLNRILGDPEALRDLLNNHILKSAMCAEAIVAXXXXXXXXXXX 361
+TL APTNEAFEK+P L RI+GD A L+ HIL + C+E+I+
Sbjct: 269 FTLFAPTNEAFEKLPRGVLERIMGDKVASEALMKYHILNTLQCSESIMGGAVFETLEGNT 328
Query: 362 XXXXCSGDMLTINGKPIISNKDVLAINGVIHFIDELLIPDSAKTLFELAAESDVSTAVDL 541
C GD +T+NG +++ KD++ NGVIH ID++LIPDSAK + ELA + +T DL
Sbjct: 329 IEIGCDGDSITVNGIKMVNKKDIVTNNGVIHLIDQVLIPDSAKQVIELAGKQQ-TTFTDL 387
Query: 542 FRQAGLGSHLSGNERLTLLAPMNSVFKDGTPRIDARTKNLLL-NHMIKDQLASKYLYHGQ 718
Q GL S L + TLLAP+N+ F D T +D R L+L NH++K ++ LY+GQ
Sbjct: 388 VAQLGLASALRPDGEYTLLAPVNNAFSDDTLSMDQRLLKLILQNHILKVKVGLNELYNGQ 447
Query: 719 TLDTLGGKKLRVFVYRNSLCIENSCIAAHDKRGRYGTLFTMDRMLTPPMGTVMDVLKGDN 898
L+T+GGK+LRVFVYR ++CIENSC+ K+GR G + ++ P ++ + LK D
Sbjct: 448 ILETIGGKQLRVFVYRTAVCIENSCMEKGSKQGRNGAIHIFREIIKPAEKSLHEKLKQDK 507
Query: 899 RFSMLVAAIQSAGLTETLNREGVYTVFAPTNEAFQALPLGERNKLLGNAKELANILKYHV 1078
RFS ++ +++A L E L + G +T+F PTN+AF+ + E+ L+ + L NI+ YH+
Sbjct: 508 RFSTFLSLLEAADLKELLTQPGDWTLFVPTNDAFKGMTSEEKEILIRDKNALQNIILYHL 567
Query: 1079 GDEILVSGGI--GALVRLKSLQGDKLEVSSKNSLVTVNKEPVAEADIMATNGVVHTINTV 1252
+ + G G LK+ QG K+ + N + VN+ E+DIM TNGV+H ++ +
Sbjct: 568 TPGVFIGKGFEPGVTNILKTTQGSKIFLKEVNDTLLVNELKSKESDIMTTNGVIHVVDKL 627
Query: 1253 LRP 1261
L P
Sbjct: 628 LYP 630
Score = 90.5 bits (223), Expect = 5e-18
Identities = 95/398 (23%), Positives = 166/398 (41%), Gaps = 17/398 (4%)
Frame = +2
Query: 143 ASGLNTLLEGDGQYTLLAPTNEAFEKIPAETLNRILGDPEA-LRDLLNNHILKSAMCAEA 319
AS L +EG G +T AP+NEA++ + ++ + + L + L++H++ M +
Sbjct: 119 ASKLREEIEGKGSFTYFAPSNEAWDNLDSDIRRGLESNVNVELLNALHSHMINKRMLTKD 178
Query: 320 IV--AXXXXXXXXXXXXXXXCSGDMLTINGKPIISNKDVLAINGVIHFIDELLIPDSAKT 493
+ ++T+N II + A NGV+H ID +L
Sbjct: 179 LKNGMIIPSMYNNLGLFINHYPNGVVTVNCARIIHGNQI-ATNGVVHVIDRVLTQIGTSI 237
Query: 494 LFELAAESDVSTAVDLFRQAGLGSH----LSGNERLTLLAPMNSVFKDGTPRIDAR---- 649
+ AE D+S+ FR A + S L + TL AP N F+ + R
Sbjct: 238 QDFIEAEDDLSS----FRAAAITSDILEALGRDGHFTLFAPTNEAFEKLPRGVLERIMGD 293
Query: 650 ---TKNLLLNHMIKDQLASKYLYHGQTLDTLGGKKLRVFVYRNSLCIEN-SCIAAHDKRG 817
++ L+ H++ S+ + G +TL G + + +S+ + + D
Sbjct: 294 KVASEALMKYHILNTLQCSESIMGGAVFETLEGNTIEIGCDGDSITVNGIKMVNKKDIVT 353
Query: 818 RYGTLFTMDRMLTPPMGTVMDVLKGDNR--FSMLVAAIQSAGLTETLNREGVYTVFAPTN 991
G + +D++L P + L G + F+ LVA + GL L +G YT+ AP N
Sbjct: 354 NNGVIHLIDQVLIPDSAKQVIELAGKQQTTFTDLVAQL---GLASALRPDGEYTLLAPVN 410
Query: 992 EAFQALPLGERNKLLGNAKELANILKYHVGDEILVSGGIGALVRLKSLQGDKLEVSSKNS 1171
AF L +LL + +ILK VG L +G I L+++ G +L V +
Sbjct: 411 NAFSDDTLSMDQRLLKLILQ-NHILKVKVGLNELYNGQI-----LETIGGKQLRVFVYRT 464
Query: 1172 LVTVNKEPVAEADIMATNGVVHTINTVLRPPANKPQER 1285
V + + + NG +H +++P E+
Sbjct: 465 AVCIENSCMEKGSKQGRNGAIHIFREIIKPAEKSLHEK 502
>ref|NP_006466.2| periostin isoform 1 [Homo sapiens].
Length = 836
Score = 322 bits (825), Expect = 8e-88
Identities = 172/423 (40%), Positives = 254/423 (60%), Gaps = 3/423 (0%)
Frame = +2
Query: 2 ARLLKADHHATNGVVHLIDKVISTVTNNIQQIIEIEDTFETLRAAVAASGLNTLLEGDGQ 181
AR++ + ATNGVVH+ID+V++ + +IQ IE ED + RAA S + L DG
Sbjct: 209 ARIIHGNQIATNGVVHVIDRVLTQIGTSIQDFIEAEDDLSSFRAAAITSDILEALGRDGH 268
Query: 182 YTLLAPTNEAFEKIPAETLNRILGDPEALRDLLNNHILKSAMCAEAIVAXXXXXXXXXXX 361
+TL APTNEAFEK+P L RI+GD A L+ HIL + C+E+I+
Sbjct: 269 FTLFAPTNEAFEKLPRGVLERIMGDKVASEALMKYHILNTLQCSESIMGGAVFETLEGNT 328
Query: 362 XXXXCSGDMLTINGKPIISNKDVLAINGVIHFIDELLIPDSAKTLFELAAESDVSTAVDL 541
C GD +T+NG +++ KD++ NGVIH ID++LIPDSAK + ELA + +T DL
Sbjct: 329 IEIGCDGDSITVNGIKMVNKKDIVTNNGVIHLIDQVLIPDSAKQVIELAGKQQ-TTFTDL 387
Query: 542 FRQAGLGSHLSGNERLTLLAPMNSVFKDGTPRIDARTKNLLL-NHMIKDQLASKYLYHGQ 718
Q GL S L + TLLAP+N+ F D T +D R L+L NH++K ++ LY+GQ
Sbjct: 388 VAQLGLASALRPDGEYTLLAPVNNAFSDDTLSMDQRLLKLILQNHILKVKVGLNELYNGQ 447
Query: 719 TLDTLGGKKLRVFVYRNSLCIENSCIAAHDKRGRYGTLFTMDRMLTPPMGTVMDVLKGDN 898
L+T+GGK+LRVFVYR ++CIENSC+ K+GR G + ++ P ++ + LK D
Sbjct: 448 ILETIGGKQLRVFVYRTAVCIENSCMEKGSKQGRNGAIHIFREIIKPAEKSLHEKLKQDK 507
Query: 899 RFSMLVAAIQSAGLTETLNREGVYTVFAPTNEAFQALPLGERNKLLGNAKELANILKYHV 1078
RFS ++ +++A L E L + G +T+F PTN+AF+ + E+ L+ + L NI+ YH+
Sbjct: 508 RFSTFLSLLEAADLKELLTQPGDWTLFVPTNDAFKGMTSEEKEILIRDKNALQNIILYHL 567
Query: 1079 GDEILVSGGI--GALVRLKSLQGDKLEVSSKNSLVTVNKEPVAEADIMATNGVVHTINTV 1252
+ + G G LK+ QG K+ + N + VN+ E+DIM TNGV+H ++ +
Sbjct: 568 TPGVFIGKGFEPGVTNILKTTQGSKIFLKEVNDTLLVNELKSKESDIMTTNGVIHVVDKL 627
Query: 1253 LRP 1261
L P
Sbjct: 628 LYP 630
Score = 90.5 bits (223), Expect = 5e-18
Identities = 95/398 (23%), Positives = 166/398 (41%), Gaps = 17/398 (4%)
Frame = +2
Query: 143 ASGLNTLLEGDGQYTLLAPTNEAFEKIPAETLNRILGDPEA-LRDLLNNHILKSAMCAEA 319
AS L +EG G +T AP+NEA++ + ++ + + L + L++H++ M +
Sbjct: 119 ASKLREEIEGKGSFTYFAPSNEAWDNLDSDIRRGLESNVNVELLNALHSHMINKRMLTKD 178
Query: 320 IV--AXXXXXXXXXXXXXXXCSGDMLTINGKPIISNKDVLAINGVIHFIDELLIPDSAKT 493
+ ++T+N II + A NGV+H ID +L
Sbjct: 179 LKNGMIIPSMYNNLGLFINHYPNGVVTVNCARIIHGNQI-ATNGVVHVIDRVLTQIGTSI 237
Query: 494 LFELAAESDVSTAVDLFRQAGLGSH----LSGNERLTLLAPMNSVFKDGTPRIDAR---- 649
+ AE D+S+ FR A + S L + TL AP N F+ + R
Sbjct: 238 QDFIEAEDDLSS----FRAAAITSDILEALGRDGHFTLFAPTNEAFEKLPRGVLERIMGD 293
Query: 650 ---TKNLLLNHMIKDQLASKYLYHGQTLDTLGGKKLRVFVYRNSLCIEN-SCIAAHDKRG 817
++ L+ H++ S+ + G +TL G + + +S+ + + D
Sbjct: 294 KVASEALMKYHILNTLQCSESIMGGAVFETLEGNTIEIGCDGDSITVNGIKMVNKKDIVT 353
Query: 818 RYGTLFTMDRMLTPPMGTVMDVLKGDNR--FSMLVAAIQSAGLTETLNREGVYTVFAPTN 991
G + +D++L P + L G + F+ LVA + GL L +G YT+ AP N
Sbjct: 354 NNGVIHLIDQVLIPDSAKQVIELAGKQQTTFTDLVAQL---GLASALRPDGEYTLLAPVN 410
Query: 992 EAFQALPLGERNKLLGNAKELANILKYHVGDEILVSGGIGALVRLKSLQGDKLEVSSKNS 1171
AF L +LL + +ILK VG L +G I L+++ G +L V +
Sbjct: 411 NAFSDDTLSMDQRLLKLILQ-NHILKVKVGLNELYNGQI-----LETIGGKQLRVFVYRT 464
Query: 1172 LVTVNKEPVAEADIMATNGVVHTINTVLRPPANKPQER 1285
V + + + NG +H +++P E+
Sbjct: 465 AVCIENSCMEKGSKQGRNGAIHIFREIIKPAEKSLHEK 502
>ref|NP_055951.2| stabilin-1 precursor [Homo sapiens].
Length = 2570
Score = 63.9 bits (154), Expect = 5e-10
Identities = 54/187 (28%), Positives = 89/187 (47%), Gaps = 17/187 (9%)
Frame = +2
Query: 860 PMGTVMDVLKGDNRFSMLVAAIQSAGLTETLNREGVYTVFAPTNEAFQALPLGERNKLL- 1036
P T+ +L FS +++ GL L+ G +TVFAP+NEA +L G L
Sbjct: 505 PKRTIGQILASTEAFSRFETILENCGLPSILDGPGPFTVFAPSNEAVDSLRDGRLIYLFT 564
Query: 1037 GNAKELANILKYHVGD------EILVSGGIGALVRLKSLQGDKLEVS-SKNSLVTVNKE- 1192
+L +++YH+ + E L+S G R+ ++ L V+ S+ + + E
Sbjct: 565 AGLSKLQELVRYHIYNHGQLTVEKLISKG-----RILTMANQVLAVNISEEGRILLGPEG 619
Query: 1193 -PVAEADIMATNGVVHTINTVLRPPANKP-------QERGDELADSALEIFKQASAFSRA 1348
P+ D+MA NGV+H ++ +L PP P +E+ +A S ++ QA S
Sbjct: 620 VPLQRVDVMAANGVIHMLDGILLPPTILPILPKHCSEEQHKIVAGSCVDC--QALNTSTC 677
Query: 1349 TQSSVKL 1369
+SVKL
Sbjct: 678 PPNSVKL 684
Score = 52.8 bits (125), Expect = 1e-06
Identities = 42/170 (24%), Positives = 75/170 (44%), Gaps = 13/170 (7%)
Frame = +2
Query: 8 LLKADHHATNGVVHLIDKVISTVTNN--------IQQIIEIEDTFETLRAAVAASGLNTL 163
+ KA++ A NGV H++ + + I QI+ + F + GL ++
Sbjct: 475 IYKANNIAANGVFHVVTGLRWQAPSGTPGDPKRTIGQILASTEAFSRFETILENCGLPSI 534
Query: 164 LEGDGQYTLLAPTNEAFEKI-PAETLNRILGDPEALRDLLNNHILK-SAMCAEAIVAXXX 337
L+G G +T+ AP+NEA + + + L++L+ HI + E +++
Sbjct: 535 LDGPGPFTVFAPSNEAVDSLRDGRLIYLFTAGLSKLQELVRYHIYNHGQLTVEKLISKGR 594
Query: 338 XXXXXXXXXXXXCSGD---MLTINGKPIISNKDVLAINGVIHFIDELLIP 478
S + +L G P + DV+A NGVIH +D +L+P
Sbjct: 595 ILTMANQVLAVNISEEGRILLGPEGVP-LQRVDVMAANGVIHMLDGILLP 643
>ref|NP_060034.9| stabilin-2 precursor [Homo sapiens].
Length = 2551
Score = 51.2 bits (121), Expect = 4e-06
Identities = 56/225 (24%), Positives = 98/225 (43%), Gaps = 23/225 (10%)
Frame = +2
Query: 671 HMIKDQLASKYLYHGQTLDTLGGKKLRVFVYRNSLCIENSC--------IAAHDKRGRYG 826
H+I Q+ +Y+ + TL GK +F I+ I D G
Sbjct: 437 HIIAGQMNIEYMNNTDMFYTLTGKSGEIFNSDKDNQIKLKLHGGKKKVKIIQGDIIASNG 496
Query: 827 TLFTMDRM---LTPPMG-----TVMDVLKGDNRFSMLVAAIQSAGLTETLNREGV---YT 973
L +DR L P T+M +L+ R+S + ++ L L+ +GV YT
Sbjct: 497 LLHILDRAMDKLEPTFESNNEQTIMTMLQP--RYSKFRSLLEETNLGHALDEDGVGGPYT 554
Query: 974 VFAPTNEAFQALPLGERNKLLG--NAKELANILKYH-VGDEILVSGGIGALVRLKSLQGD 1144
+F P NEA + G + LL +++L +++YH V L + + ++S+
Sbjct: 555 IFVPNNEALNNMKDGTLDYLLSPEGSRKLLELVRYHIVPFTQLEVATLISTPHIRSMANQ 614
Query: 1145 KLEV-SSKNSLVTVNKEPVAEADIMATNGVVHTINTVLRPPANKP 1276
++ ++ N + N + E +I A NG ++T+ VL PP+ P
Sbjct: 615 LIQFNTTDNGQILANDVAMEEIEITAKNGRIYTLTGVLIPPSIVP 659
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 80,434,177
Number of extensions: 2243569
Number of successful extensions: 6816
Number of sequences better than 1.0e-05: 7
Number of HSP's gapped: 6729
Number of HSP's successfully gapped: 14
Length of query: 670
Length of database: 18,297,164
Length adjustment: 109
Effective length of query: 561
Effective length of database: 14,704,088
Effective search space: 8248993368
Effective search space used: 8248993368
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-001413
(2012 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_033395.1| transforming growth factor-beta-induced protein... 794 0.0
Alignment gi|NP_001185695.1| periostin isoform 3 [Mus musculus]. 329 4e-90
Alignment gi|NP_001185694.1| periostin isoform 2 [Mus musculus]. 329 4e-90
Alignment gi|NP_056599.1| periostin isoform 1 [Mus musculus]. 329 4e-90
Alignment gi|NP_619614.1| stabilin-2 precursor [Mus musculus]. 62 2e-09
Alignment gi|NP_619613.2| stabilin-1 precursor [Mus musculus]. 60 8e-09
>ref|NP_033395.1| transforming growth factor-beta-induced protein ig-h3 precursor [Mus
musculus].
Length = 683
Score = 794 bits (2050), Expect = 0.0
Identities = 405/469 (86%), Positives = 430/469 (91%)
Frame = +2
Query: 2 ARLLKADHHATNGVVHLIDKVISTVTNNIQQIIEIEDTFETLRAAVAASGLNTLLEGDGQ 181
ARLLKADHHATNGVVHLIDKVIST+TNNIQQIIEIEDTFETLRAAVAASGLNT+LEGDGQ
Sbjct: 215 ARLLKADHHATNGVVHLIDKVISTITNNIQQIIEIEDTFETLRAAVAASGLNTVLEGDGQ 274
Query: 182 YTLLAPTNEAFEKIPAETLNRILGDPEALRDLLNNHILKSAMCAEAIVAXXXXXXXXXXX 361
+TLLAPTNEAFEKIPAETLNRILGDPEALRDLLNNHILKSAMCAEAIVA
Sbjct: 275 FTLLAPTNEAFEKIPAETLNRILGDPEALRDLLNNHILKSAMCAEAIVAGMSMETLGGTT 334
Query: 362 XXXXCSGDMLTINGKPIISNKDVLAINGVIHFIDELLIPDSAKTLFELAAESDVSTAVDL 541
CSGD LTINGK +ISNKD+LA NGVIHFIDELLIPDSAKTL ELA ESDVSTA+D+
Sbjct: 335 LEVGCSGDKLTINGKAVISNKDILATNGVIHFIDELLIPDSAKTLLELAGESDVSTAIDI 394
Query: 542 FRQAGLGSHLSGNERLTLLAPMNSVFKDGTPRIDARTKNLLLNHMIKDQLASKYLYHGQT 721
+QAGL +HLSG E+LT LAP+NSVFKDG PRIDA+ K LLLNHM+K+QLASKYLY GQT
Sbjct: 395 LKQAGLDTHLSGKEQLTFLAPLNSVFKDGVPRIDAQMKTLLLNHMVKEQLASKYLYSGQT 454
Query: 722 LDTLGGKKLRVFVYRNSLCIENSCIAAHDKRGRYGTLFTMDRMLTPPMGTVMDVLKGDNR 901
LDTLGGKKLRVFVYRNSLCIENSCIAAHDKRGR+GTLFTMDRMLTPPMGTVMDVLKGDNR
Sbjct: 455 LDTLGGKKLRVFVYRNSLCIENSCIAAHDKRGRFGTLFTMDRMLTPPMGTVMDVLKGDNR 514
Query: 902 FSMLVAAIQSAGLTETLNREGVYTVFAPTNEAFQALPLGERNKLLGNAKELANILKYHVG 1081
FSMLVAAIQSAGL E LNREGVYTVFAPTNEAFQA+P E NKLL NAKEL NILKYH+G
Sbjct: 515 FSMLVAAIQSAGLMEILNREGVYTVFAPTNEAFQAMPPEELNKLLANAKELTNILKYHIG 574
Query: 1082 DEILVSGGIGALVRLKSLQGDKLEVSSKNSLVTVNKEPVAEADIMATNGVVHTINTVLRP 1261
DEILVSGGIGALVRLKSLQGDKLEVSSKN++V+VNKEPVAE DIMATNGVV+ INTVL+P
Sbjct: 575 DEILVSGGIGALVRLKSLQGDKLEVSSKNNVVSVNKEPVAETDIMATNGVVYAINTVLQP 634
Query: 1262 PANKPQERGDELADSALEIFKQASAFSRATQSSVKLAPVYQRLLERMKH 1408
PAN+PQERGDELADSALEIFKQASA+SRA Q SV+LAPVYQRLLERMKH
Sbjct: 635 PANRPQERGDELADSALEIFKQASAYSRAAQRSVRLAPVYQRLLERMKH 683
Score = 105 bits (263), Expect = 1e-22
Identities = 94/384 (24%), Positives = 172/384 (44%), Gaps = 17/384 (4%)
Frame = +2
Query: 164 LEGDGQYTLLAPTNEAFEKIPAETLNRILGDPE-ALRDLLNNHILKSAMCAEAIV--AXX 334
+EG G +T+ AP+NEA+ +PAE L+ ++ + L + L H++ + + +
Sbjct: 132 MEGPGSFTIFAPSNEAWSSLPAEVLDSLVSNVNIELLNALRYHMVDRRVLTDELKHGMTL 191
Query: 335 XXXXXXXXXXXXXCSGDMLTINGKPIISNKDVLAINGVIHFIDELL--IPDSAKTLFELA 508
++T+N ++ D A NGV+H ID+++ I ++ + + E+
Sbjct: 192 TSMYQNSNIQIHHYPNGIVTVNCARLL-KADHHATNGVVHLIDKVISTITNNIQQIIEI- 249
Query: 509 AESDVSTAVDLFRQAGLGSHLSGNERLTLLAPMNSVFKDGTPRIDARTKN---------- 658
E T +GL + L G+ + TLLAP N F+ +I A T N
Sbjct: 250 -EDTFETLRAAVAASGLNTVLEGDGQFTLLAPTNEAFE----KIPAETLNRILGDPEALR 304
Query: 659 -LLLNHMIKDQLASKYLYHGQTLDTLGGKKLRVFVYRNSLCIENSCIAAH-DKRGRYGTL 832
LL NH++K + ++ + G +++TLGG L V + L I + ++ D G +
Sbjct: 305 DLLNNHILKSAMCAEAIVAGMSMETLGGTTLEVGCSGDKLTINGKAVISNKDILATNGVI 364
Query: 833 FTMDRMLTPPMGTVMDVLKGDNRFSMLVAAIQSAGLTETLNREGVYTVFAPTNEAFQALP 1012
+D +L P + L G++ S + ++ AGL L+ + T AP N F
Sbjct: 365 HFIDELLIPDSAKTLLELAGESDVSTAIDILKQAGLDTHLSGKEQLTFLAPLNSVF---- 420
Query: 1013 LGERNKLLGNAKELANILKYHVGDEILVSGGIGALVRLKSLQGDKLEVSSKNSLVTVNKE 1192
++ + ++ +L H+ E L S + + L +L G KL V + + +
Sbjct: 421 ---KDGVPRIDAQMKTLLLNHMVKEQLASKYLYSGQTLDTLGGKKLRVFVYRNSLCIENS 477
Query: 1193 PVAEADIMATNGVVHTINTVLRPP 1264
+A D G + T++ +L PP
Sbjct: 478 CIAAHDKRGRFGTLFTMDRMLTPP 501
Score = 64.7 bits (156), Expect = 3e-10
Identities = 44/121 (36%), Positives = 68/121 (56%), Gaps = 7/121 (5%)
Frame = +2
Query: 941 TETLNRE----GVYTVFAPTNEAFQALPLGERNKLLGNAK-ELANILKYHVGDEILVSGG 1105
TE L E G +T+FAP+NEA+ +LP + L+ N EL N L+YH+ D +++
Sbjct: 125 TEKLRPEMEGPGSFTIFAPSNEAWSSLPAEVLDSLVSNVNIELLNALRYHMVDRRVLTDE 184
Query: 1106 IGALVRLKSL-QGDKLEVSS-KNSLVTVNKEPVAEADIMATNGVVHTINTVLRPPANKPQ 1279
+ + L S+ Q +++ N +VTVN + +AD ATNGVVH I+ V+ N Q
Sbjct: 185 LKHGMTLTSMYQNSNIQIHHYPNGIVTVNCARLLKADHHATNGVVHLIDKVISTITNNIQ 244
Query: 1280 E 1282
+
Sbjct: 245 Q 245
>ref|NP_001185695.1| periostin isoform 3 [Mus musculus].
Length = 783
Score = 329 bits (844), Expect = 4e-90
Identities = 176/423 (41%), Positives = 256/423 (60%), Gaps = 3/423 (0%)
Frame = +2
Query: 2 ARLLKADHHATNGVVHLIDKVISTVTNNIQQIIEIEDTFETLRAAVAASGLNTLLEGDGQ 181
AR++ + ATNGVVH+ID+V++ + +IQ +E ED + RAA S L L DG
Sbjct: 211 ARVIHGNQIATNGVVHVIDRVLTQIGTSIQDFLEAEDDLSSFRAAAITSDLLESLGRDGH 270
Query: 182 YTLLAPTNEAFEKIPAETLNRILGDPEALRDLLNNHILKSAMCAEAIVAXXXXXXXXXXX 361
+TL APTNEAFEK+P L RI+GD A L+ HIL + C+EAI
Sbjct: 271 FTLFAPTNEAFEKLPRGVLERIMGDKVASEALMKYHILNTLQCSEAITGGAVFETMEGNT 330
Query: 362 XXXXCSGDMLTINGKPIISNKDVLAINGVIHFIDELLIPDSAKTLFELAAESDVSTAVDL 541
C GD ++ING +++ KD++ NGVIH IDE+LIPDSAK + ELA + +T DL
Sbjct: 331 IEIGCEGDSISINGIKMVNKKDIVTKNGVIHLIDEVLIPDSAKQVIELAGKQQ-TTFTDL 389
Query: 542 FRQAGLGSHLSGNERLTLLAPMNSVFKDGTPRIDARTKNLLL-NHMIKDQLASKYLYHGQ 718
Q GL S L + TLLAP+N+ F D T +D R L+L NH++K ++ LY+GQ
Sbjct: 390 VAQLGLASSLKPDGEYTLLAPVNNAFSDDTLSMDQRLLKLILQNHILKVKVGLSDLYNGQ 449
Query: 719 TLDTLGGKKLRVFVYRNSLCIENSCIAAHDKRGRYGTLFTMDRMLTPPMGTVMDVLKGDN 898
L+T+GGK+LRVFVYR ++CIENSC+ K+GR G + ++ P ++ D L+ D
Sbjct: 450 ILETIGGKQLRVFVYRTAICIENSCMVRGSKQGRNGAIHIFREIIQPAEKSLHDKLRQDK 509
Query: 899 RFSMLVAAIQSAGLTETLNREGVYTVFAPTNEAFQALPLGERNKLLGNAKELANILKYHV 1078
RFS+ ++ +++A L + L + G +T+FAPTN+AF+ + ER L+G+ L NI+ YH+
Sbjct: 510 RFSIFLSLLEAADLKDLLTQPGDWTLFAPTNDAFKGMTSEERELLIGDKNALQNIILYHL 569
Query: 1079 GDEILVSGGI--GALVRLKSLQGDKLEVSSKNSLVTVNKEPVAEADIMATNGVVHTINTV 1252
+ + G G LK+ QG K+ + N + VN+ E+DIM TNGV+H ++ +
Sbjct: 570 TPGVYIGKGFEPGVTNILKTTQGSKIYLKGVNETLLVNELKSKESDIMTTNGVIHVVDKL 629
Query: 1253 LRP 1261
L P
Sbjct: 630 LYP 632
Score = 90.5 bits (223), Expect = 4e-18
Identities = 94/389 (24%), Positives = 163/389 (41%), Gaps = 17/389 (4%)
Frame = +2
Query: 146 SGLNTLLEGDGQYTLLAPTNEAFEKIPAETLNRILGDPEA-LRDLLNNHILKSAMCAEAI 322
S L +EG G YT AP+NEA+E + ++ + + L + L++H++ M + +
Sbjct: 122 SKLREEIEGKGSYTYFAPSNEAWENLDSDIRRGLENNVNVELLNALHSHMVNKRMLTKDL 181
Query: 323 V--AXXXXXXXXXXXXXXXCSGDMLTINGKPIISNKDVLAINGVIHFIDELLIPDSAKTL 496
++T+N +I + A NGV+H ID +L
Sbjct: 182 KHGMVIPSMYNNLGLFINHYPNGVVTVNCARVIHGNQI-ATNGVVHVIDRVLTQIGTSIQ 240
Query: 497 FELAAESDVSTAVDLFRQAGLGS----HLSGNERLTLLAPMNSVFKDGTPRIDAR----- 649
L AE D+S+ FR A + S L + TL AP N F+ + R
Sbjct: 241 DFLEAEDDLSS----FRAAAITSDLLESLGRDGHFTLFAPTNEAFEKLPRGVLERIMGDK 296
Query: 650 --TKNLLLNHMIKDQLASKYLYHGQTLDTLGGKKLRVFVYRNSLCIEN-SCIAAHDKRGR 820
++ L+ H++ S+ + G +T+ G + + +S+ I + D +
Sbjct: 297 VASEALMKYHILNTLQCSEAITGGAVFETMEGNTIEIGCEGDSISINGIKMVNKKDIVTK 356
Query: 821 YGTLFTMDRMLTPPMGTVMDVLKGDNR--FSMLVAAIQSAGLTETLNREGVYTVFAPTNE 994
G + +D +L P + L G + F+ LVA + GL +L +G YT+ AP N
Sbjct: 357 NGVIHLIDEVLIPDSAKQVIELAGKQQTTFTDLVAQL---GLASSLKPDGEYTLLAPVNN 413
Query: 995 AFQALPLGERNKLLGNAKELANILKYHVGDEILVSGGIGALVRLKSLQGDKLEVSSKNSL 1174
AF L +LL + +ILK VG L +G I L+++ G +L V +
Sbjct: 414 AFSDDTLSMDQRLLKLILQ-NHILKVKVGLSDLYNGQI-----LETIGGKQLRVFVYRTA 467
Query: 1175 VTVNKEPVAEADIMATNGVVHTINTVLRP 1261
+ + + NG +H +++P
Sbjct: 468 ICIENSCMVRGSKQGRNGAIHIFREIIQP 496
Score = 51.2 bits (121), Expect = 3e-06
Identities = 45/143 (31%), Positives = 73/143 (51%), Gaps = 3/143 (2%)
Frame = +2
Query: 938 LTETLNREGVYTVFAPTNEAFQALPLGERNKLLGNAK-ELANILKYHVGDEILVSGGIGA 1114
L E + +G YT FAP+NEA++ L R L N EL N L H+ ++ +++ +
Sbjct: 124 LREEIEGKGSYTYFAPSNEAWENLDSDIRRGLENNVNVELLNALHSHMVNKRMLTKDLKH 183
Query: 1115 LVRLKSLQGDK-LEVSS-KNSLVTVNKEPVAEADIMATNGVVHTINTVLRPPANKPQERG 1288
+ + S+ + L ++ N +VTVN V + +ATNGVVH I+ VL Q+
Sbjct: 184 GMVIPSMYNNLGLFINHYPNGVVTVNCARVIHGNQIATNGVVHVIDRVLTQIGTSIQDFL 243
Query: 1289 DELADSALEIFKQASAFSRATQS 1357
+ A+ L F+ A+ S +S
Sbjct: 244 E--AEDDLSSFRAAAITSDLLES 264
>ref|NP_001185694.1| periostin isoform 2 [Mus musculus].
Length = 810
Score = 329 bits (844), Expect = 4e-90
Identities = 176/423 (41%), Positives = 256/423 (60%), Gaps = 3/423 (0%)
Frame = +2
Query: 2 ARLLKADHHATNGVVHLIDKVISTVTNNIQQIIEIEDTFETLRAAVAASGLNTLLEGDGQ 181
AR++ + ATNGVVH+ID+V++ + +IQ +E ED + RAA S L L DG
Sbjct: 211 ARVIHGNQIATNGVVHVIDRVLTQIGTSIQDFLEAEDDLSSFRAAAITSDLLESLGRDGH 270
Query: 182 YTLLAPTNEAFEKIPAETLNRILGDPEALRDLLNNHILKSAMCAEAIVAXXXXXXXXXXX 361
+TL APTNEAFEK+P L RI+GD A L+ HIL + C+EAI
Sbjct: 271 FTLFAPTNEAFEKLPRGVLERIMGDKVASEALMKYHILNTLQCSEAITGGAVFETMEGNT 330
Query: 362 XXXXCSGDMLTINGKPIISNKDVLAINGVIHFIDELLIPDSAKTLFELAAESDVSTAVDL 541
C GD ++ING +++ KD++ NGVIH IDE+LIPDSAK + ELA + +T DL
Sbjct: 331 IEIGCEGDSISINGIKMVNKKDIVTKNGVIHLIDEVLIPDSAKQVIELAGKQQ-TTFTDL 389
Query: 542 FRQAGLGSHLSGNERLTLLAPMNSVFKDGTPRIDARTKNLLL-NHMIKDQLASKYLYHGQ 718
Q GL S L + TLLAP+N+ F D T +D R L+L NH++K ++ LY+GQ
Sbjct: 390 VAQLGLASSLKPDGEYTLLAPVNNAFSDDTLSMDQRLLKLILQNHILKVKVGLSDLYNGQ 449
Query: 719 TLDTLGGKKLRVFVYRNSLCIENSCIAAHDKRGRYGTLFTMDRMLTPPMGTVMDVLKGDN 898
L+T+GGK+LRVFVYR ++CIENSC+ K+GR G + ++ P ++ D L+ D
Sbjct: 450 ILETIGGKQLRVFVYRTAICIENSCMVRGSKQGRNGAIHIFREIIQPAEKSLHDKLRQDK 509
Query: 899 RFSMLVAAIQSAGLTETLNREGVYTVFAPTNEAFQALPLGERNKLLGNAKELANILKYHV 1078
RFS+ ++ +++A L + L + G +T+FAPTN+AF+ + ER L+G+ L NI+ YH+
Sbjct: 510 RFSIFLSLLEAADLKDLLTQPGDWTLFAPTNDAFKGMTSEERELLIGDKNALQNIILYHL 569
Query: 1079 GDEILVSGGI--GALVRLKSLQGDKLEVSSKNSLVTVNKEPVAEADIMATNGVVHTINTV 1252
+ + G G LK+ QG K+ + N + VN+ E+DIM TNGV+H ++ +
Sbjct: 570 TPGVYIGKGFEPGVTNILKTTQGSKIYLKGVNETLLVNELKSKESDIMTTNGVIHVVDKL 629
Query: 1253 LRP 1261
L P
Sbjct: 630 LYP 632
Score = 90.5 bits (223), Expect = 4e-18
Identities = 94/389 (24%), Positives = 163/389 (41%), Gaps = 17/389 (4%)
Frame = +2
Query: 146 SGLNTLLEGDGQYTLLAPTNEAFEKIPAETLNRILGDPEA-LRDLLNNHILKSAMCAEAI 322
S L +EG G YT AP+NEA+E + ++ + + L + L++H++ M + +
Sbjct: 122 SKLREEIEGKGSYTYFAPSNEAWENLDSDIRRGLENNVNVELLNALHSHMVNKRMLTKDL 181
Query: 323 V--AXXXXXXXXXXXXXXXCSGDMLTINGKPIISNKDVLAINGVIHFIDELLIPDSAKTL 496
++T+N +I + A NGV+H ID +L
Sbjct: 182 KHGMVIPSMYNNLGLFINHYPNGVVTVNCARVIHGNQI-ATNGVVHVIDRVLTQIGTSIQ 240
Query: 497 FELAAESDVSTAVDLFRQAGLGS----HLSGNERLTLLAPMNSVFKDGTPRIDAR----- 649
L AE D+S+ FR A + S L + TL AP N F+ + R
Sbjct: 241 DFLEAEDDLSS----FRAAAITSDLLESLGRDGHFTLFAPTNEAFEKLPRGVLERIMGDK 296
Query: 650 --TKNLLLNHMIKDQLASKYLYHGQTLDTLGGKKLRVFVYRNSLCIEN-SCIAAHDKRGR 820
++ L+ H++ S+ + G +T+ G + + +S+ I + D +
Sbjct: 297 VASEALMKYHILNTLQCSEAITGGAVFETMEGNTIEIGCEGDSISINGIKMVNKKDIVTK 356
Query: 821 YGTLFTMDRMLTPPMGTVMDVLKGDNR--FSMLVAAIQSAGLTETLNREGVYTVFAPTNE 994
G + +D +L P + L G + F+ LVA + GL +L +G YT+ AP N
Sbjct: 357 NGVIHLIDEVLIPDSAKQVIELAGKQQTTFTDLVAQL---GLASSLKPDGEYTLLAPVNN 413
Query: 995 AFQALPLGERNKLLGNAKELANILKYHVGDEILVSGGIGALVRLKSLQGDKLEVSSKNSL 1174
AF L +LL + +ILK VG L +G I L+++ G +L V +
Sbjct: 414 AFSDDTLSMDQRLLKLILQ-NHILKVKVGLSDLYNGQI-----LETIGGKQLRVFVYRTA 467
Query: 1175 VTVNKEPVAEADIMATNGVVHTINTVLRP 1261
+ + + NG +H +++P
Sbjct: 468 ICIENSCMVRGSKQGRNGAIHIFREIIQP 496
Score = 51.2 bits (121), Expect = 3e-06
Identities = 45/143 (31%), Positives = 73/143 (51%), Gaps = 3/143 (2%)
Frame = +2
Query: 938 LTETLNREGVYTVFAPTNEAFQALPLGERNKLLGNAK-ELANILKYHVGDEILVSGGIGA 1114
L E + +G YT FAP+NEA++ L R L N EL N L H+ ++ +++ +
Sbjct: 124 LREEIEGKGSYTYFAPSNEAWENLDSDIRRGLENNVNVELLNALHSHMVNKRMLTKDLKH 183
Query: 1115 LVRLKSLQGDK-LEVSS-KNSLVTVNKEPVAEADIMATNGVVHTINTVLRPPANKPQERG 1288
+ + S+ + L ++ N +VTVN V + +ATNGVVH I+ VL Q+
Sbjct: 184 GMVIPSMYNNLGLFINHYPNGVVTVNCARVIHGNQIATNGVVHVIDRVLTQIGTSIQDFL 243
Query: 1289 DELADSALEIFKQASAFSRATQS 1357
+ A+ L F+ A+ S +S
Sbjct: 244 E--AEDDLSSFRAAAITSDLLES 264
>ref|NP_056599.1| periostin isoform 1 [Mus musculus].
Length = 811
Score = 329 bits (844), Expect = 4e-90
Identities = 176/423 (41%), Positives = 256/423 (60%), Gaps = 3/423 (0%)
Frame = +2
Query: 2 ARLLKADHHATNGVVHLIDKVISTVTNNIQQIIEIEDTFETLRAAVAASGLNTLLEGDGQ 181
AR++ + ATNGVVH+ID+V++ + +IQ +E ED + RAA S L L DG
Sbjct: 211 ARVIHGNQIATNGVVHVIDRVLTQIGTSIQDFLEAEDDLSSFRAAAITSDLLESLGRDGH 270
Query: 182 YTLLAPTNEAFEKIPAETLNRILGDPEALRDLLNNHILKSAMCAEAIVAXXXXXXXXXXX 361
+TL APTNEAFEK+P L RI+GD A L+ HIL + C+EAI
Sbjct: 271 FTLFAPTNEAFEKLPRGVLERIMGDKVASEALMKYHILNTLQCSEAITGGAVFETMEGNT 330
Query: 362 XXXXCSGDMLTINGKPIISNKDVLAINGVIHFIDELLIPDSAKTLFELAAESDVSTAVDL 541
C GD ++ING +++ KD++ NGVIH IDE+LIPDSAK + ELA + +T DL
Sbjct: 331 IEIGCEGDSISINGIKMVNKKDIVTKNGVIHLIDEVLIPDSAKQVIELAGKQQ-TTFTDL 389
Query: 542 FRQAGLGSHLSGNERLTLLAPMNSVFKDGTPRIDARTKNLLL-NHMIKDQLASKYLYHGQ 718
Q GL S L + TLLAP+N+ F D T +D R L+L NH++K ++ LY+GQ
Sbjct: 390 VAQLGLASSLKPDGEYTLLAPVNNAFSDDTLSMDQRLLKLILQNHILKVKVGLSDLYNGQ 449
Query: 719 TLDTLGGKKLRVFVYRNSLCIENSCIAAHDKRGRYGTLFTMDRMLTPPMGTVMDVLKGDN 898
L+T+GGK+LRVFVYR ++CIENSC+ K+GR G + ++ P ++ D L+ D
Sbjct: 450 ILETIGGKQLRVFVYRTAICIENSCMVRGSKQGRNGAIHIFREIIQPAEKSLHDKLRQDK 509
Query: 899 RFSMLVAAIQSAGLTETLNREGVYTVFAPTNEAFQALPLGERNKLLGNAKELANILKYHV 1078
RFS+ ++ +++A L + L + G +T+FAPTN+AF+ + ER L+G+ L NI+ YH+
Sbjct: 510 RFSIFLSLLEAADLKDLLTQPGDWTLFAPTNDAFKGMTSEERELLIGDKNALQNIILYHL 569
Query: 1079 GDEILVSGGI--GALVRLKSLQGDKLEVSSKNSLVTVNKEPVAEADIMATNGVVHTINTV 1252
+ + G G LK+ QG K+ + N + VN+ E+DIM TNGV+H ++ +
Sbjct: 570 TPGVYIGKGFEPGVTNILKTTQGSKIYLKGVNETLLVNELKSKESDIMTTNGVIHVVDKL 629
Query: 1253 LRP 1261
L P
Sbjct: 630 LYP 632
Score = 90.5 bits (223), Expect = 4e-18
Identities = 94/389 (24%), Positives = 163/389 (41%), Gaps = 17/389 (4%)
Frame = +2
Query: 146 SGLNTLLEGDGQYTLLAPTNEAFEKIPAETLNRILGDPEA-LRDLLNNHILKSAMCAEAI 322
S L +EG G YT AP+NEA+E + ++ + + L + L++H++ M + +
Sbjct: 122 SKLREEIEGKGSYTYFAPSNEAWENLDSDIRRGLENNVNVELLNALHSHMVNKRMLTKDL 181
Query: 323 V--AXXXXXXXXXXXXXXXCSGDMLTINGKPIISNKDVLAINGVIHFIDELLIPDSAKTL 496
++T+N +I + A NGV+H ID +L
Sbjct: 182 KHGMVIPSMYNNLGLFINHYPNGVVTVNCARVIHGNQI-ATNGVVHVIDRVLTQIGTSIQ 240
Query: 497 FELAAESDVSTAVDLFRQAGLGS----HLSGNERLTLLAPMNSVFKDGTPRIDAR----- 649
L AE D+S+ FR A + S L + TL AP N F+ + R
Sbjct: 241 DFLEAEDDLSS----FRAAAITSDLLESLGRDGHFTLFAPTNEAFEKLPRGVLERIMGDK 296
Query: 650 --TKNLLLNHMIKDQLASKYLYHGQTLDTLGGKKLRVFVYRNSLCIEN-SCIAAHDKRGR 820
++ L+ H++ S+ + G +T+ G + + +S+ I + D +
Sbjct: 297 VASEALMKYHILNTLQCSEAITGGAVFETMEGNTIEIGCEGDSISINGIKMVNKKDIVTK 356
Query: 821 YGTLFTMDRMLTPPMGTVMDVLKGDNR--FSMLVAAIQSAGLTETLNREGVYTVFAPTNE 994
G + +D +L P + L G + F+ LVA + GL +L +G YT+ AP N
Sbjct: 357 NGVIHLIDEVLIPDSAKQVIELAGKQQTTFTDLVAQL---GLASSLKPDGEYTLLAPVNN 413
Query: 995 AFQALPLGERNKLLGNAKELANILKYHVGDEILVSGGIGALVRLKSLQGDKLEVSSKNSL 1174
AF L +LL + +ILK VG L +G I L+++ G +L V +
Sbjct: 414 AFSDDTLSMDQRLLKLILQ-NHILKVKVGLSDLYNGQI-----LETIGGKQLRVFVYRTA 467
Query: 1175 VTVNKEPVAEADIMATNGVVHTINTVLRP 1261
+ + + NG +H +++P
Sbjct: 468 ICIENSCMVRGSKQGRNGAIHIFREIIQP 496
Score = 51.2 bits (121), Expect = 3e-06
Identities = 45/143 (31%), Positives = 73/143 (51%), Gaps = 3/143 (2%)
Frame = +2
Query: 938 LTETLNREGVYTVFAPTNEAFQALPLGERNKLLGNAK-ELANILKYHVGDEILVSGGIGA 1114
L E + +G YT FAP+NEA++ L R L N EL N L H+ ++ +++ +
Sbjct: 124 LREEIEGKGSYTYFAPSNEAWENLDSDIRRGLENNVNVELLNALHSHMVNKRMLTKDLKH 183
Query: 1115 LVRLKSLQGDK-LEVSS-KNSLVTVNKEPVAEADIMATNGVVHTINTVLRPPANKPQERG 1288
+ + S+ + L ++ N +VTVN V + +ATNGVVH I+ VL Q+
Sbjct: 184 GMVIPSMYNNLGLFINHYPNGVVTVNCARVIHGNQIATNGVVHVIDRVLTQIGTSIQDFL 243
Query: 1289 DELADSALEIFKQASAFSRATQS 1357
+ A+ L F+ A+ S +S
Sbjct: 244 E--AEDDLSSFRAAAITSDLLES 264
>ref|NP_619614.1| stabilin-2 precursor [Mus musculus].
Length = 2559
Score = 62.0 bits (149), Expect = 2e-09
Identities = 55/231 (23%), Positives = 112/231 (48%), Gaps = 29/231 (12%)
Frame = +2
Query: 671 HMIKDQLASKYLYHGQTLDTLGGK-------------KLRVFVYRNSLCIENSCIAAHDK 811
H+I Q++++ +Y+ T TL GK KL+++ + I+ + +A++
Sbjct: 445 HIIAGQMSTEQMYNLDTFYTLTGKSGEIINKDKDNQLKLKLYGSKIVQIIQGNIVASN-- 502
Query: 812 RGRYGTLFTMDRML--------TPPMGTVMDVLKGDNRFSMLVAAIQSAGLTETLNREGV 967
G + +DR + + P T+M +L+ R+ + ++ + + L + G+
Sbjct: 503 ----GLVHILDRAMDKIEPTLESNPQQTIMTMLQP--RYGKFRSLLEKTNVGQALEKGGI 556
Query: 968 ---YTVFAPTNEAFQALPLGERNKLLG--NAKELANILKYHV--GDEILVSGGIGAL-VR 1123
YT+F P+NEA + G + LL +++L +++YH+ ++ V+ + L +R
Sbjct: 557 DEPYTIFVPSNEALSNMTAGVLDYLLSPEGSRKLLELVRYHIVAFTQLEVATLVSTLHIR 616
Query: 1124 LKSLQGDKLEVSSKNSLVTVNKEPVAEADIMATNGVVHTINTVLRPPANKP 1276
+ Q +SSK ++ N V E ++ A NG ++T+ VL PP+ P
Sbjct: 617 SMANQIITFNISSKGQIL-ANNVAVDETEVAAKNGRIYTLTGVLIPPSILP 666
Score = 56.6 bits (135), Expect = 7e-08
Identities = 70/286 (24%), Positives = 116/286 (40%), Gaps = 26/286 (9%)
Frame = +2
Query: 494 LFELAAESDVSTAVDLFRQAGLGSHLSGNERLTLLAPMNSVFKDGTPRIDARTKNLLLNH 673
L EL+ S+ + A L S LS LT+L P KD +D K+ L+
Sbjct: 1006 LMELSFLSEAAVFYQWINNASLQSMLSATSNLTVLVPSLQAIKD----MDQNEKSFWLS- 1060
Query: 674 MIKDQLASKYLYHG----------QTLDT-------LGGKKLRVFVYRNSLCIENSCIAA 802
++ + + YH QTL + L G LR+ ++ IE +
Sbjct: 1061 --RNNIPALIKYHTLLGTYRVADLQTLPSSHMLATSLQGSFLRLDKADGNITIEGASFVD 1118
Query: 803 HDKRGRYGTLFTMDRMLTPPMG------TVMDVLKGDNRFSMLVAAIQSAGLTETLNREG 964
D G + ++++L P G +++ L+ +S+ I L +
Sbjct: 1119 GDNAATNGVVHIINKVLIPQRGLTGSLPSLLTRLEQMPDYSIFRGYIIHYNLASAIEAAD 1178
Query: 965 VYTVFAPTNEAFQALPLGERNKLLGNAKELANILKYHV--GDEILVSGGIGALVRLKSLQ 1138
YTVF P NEA ++ R K + KE +IL+YHV G+++L + + R L
Sbjct: 1179 AYTVFVPNNEAIESY---IREKKATSLKE--DILQYHVVLGEKLLRNDLHNGMHRETMLG 1233
Query: 1139 -GDKLEVSSKNSLVTVNKEPVAEADIMATNGVVHTINTVLRPPANK 1273
L N + VN+ P+ ++ GV+H + VL N+
Sbjct: 1234 FSYLLAFFLHNDQLYVNEAPINYTNVATDKGVIHGLEKVLEIKKNR 1279
Score = 56.2 bits (134), Expect = 9e-08
Identities = 32/102 (31%), Positives = 59/102 (57%), Gaps = 2/102 (1%)
Frame = +2
Query: 962 GVYTVFAPTNEAFQALPLGERNKLLGNAKELANILKYHV-GDEILVSGGIGALVRLKSLQ 1138
G +TVF P++++F + + K+ ++ IL+YHV + L+ + + +LQ
Sbjct: 1635 GPFTVFVPSSDSFNS---ESKLKVWDKQGLMSQILRYHVVACQQLLLENLKVITSATTLQ 1691
Query: 1139 GDKLEVSSKNSLVTVNKEP-VAEADIMATNGVVHTINTVLRP 1261
G+ + +S V +NK+ V +DI++TNGV+H I+T+L P
Sbjct: 1692 GEPISISVSQDTVLINKKAKVLSSDIISTNGVIHVIDTLLSP 1733
>ref|NP_619613.2| stabilin-1 precursor [Mus musculus].
Length = 2571
Score = 59.7 bits (143), Expect = 8e-09
Identities = 48/169 (28%), Positives = 79/169 (46%), Gaps = 15/169 (8%)
Frame = +2
Query: 815 GRYGTLFTMDRMLTPPMG-----TVMDVLKGDNRFSMLVAAIQSAGLTETLNREGVYTVF 979
G + T+ + L PP+ TV +L F+ +++ GL L+ G +TVF
Sbjct: 486 GVFHTVTALRWQLPPPLPGDSKKTVGQILASTEVFTRFETILENCGLPSILDGPGPFTVF 545
Query: 980 APTNEAFQALPLGERNKLL-GNAKELANILKYHVGD------EILVSGGIGALVRLKSLQ 1138
AP+NEA +L G L +L +++YH+ + E L+S G R+ ++
Sbjct: 546 APSNEAVDSLRDGRLIYLFTAGLSKLQELVRYHIYNHGQLTVEKLISKG-----RVLTMA 600
Query: 1139 GDKLEVS-SKNSLVTVNKE--PVAEADIMATNGVVHTINTVLRPPANKP 1276
L V+ S+ + + E PV D+ A NGV+H + +L PP P
Sbjct: 601 NQVLTVNISEEGRILLGPEGIPVRRVDVPAANGVIHMLEGILLPPTILP 649
Score = 51.6 bits (122), Expect = 2e-06
Identities = 51/221 (23%), Positives = 90/221 (40%), Gaps = 13/221 (5%)
Frame = +2
Query: 14 KADHHATNGVVHLIDKVISTVT--------NNIQQIIEIEDTFETLRAAVAASGLNTLLE 169
KA++ A NGV H + + + + QI+ + F + GL ++L+
Sbjct: 478 KANYIAANGVFHTVTALRWQLPPPLPGDSKKTVGQILASTEVFTRFETILENCGLPSILD 537
Query: 170 GDGQYTLLAPTNEAFEKI-PAETLNRILGDPEALRDLLNNHILK-SAMCAEAIVAXXXXX 343
G G +T+ AP+NEA + + + L++L+ HI + E +++
Sbjct: 538 GPGPFTVFAPSNEAVDSLRDGRLIYLFTAGLSKLQELVRYHIYNHGQLTVEKLISKGRVL 597
Query: 344 XXXXXXXXXXCSGD---MLTINGKPIISNKDVLAINGVIHFIDELLIPDSAKTLFELAAE 514
S + +L G P + DV A NGVIH ++ +L+P + + +
Sbjct: 598 TMANQVLTVNISEEGRILLGPEGIP-VRRVDVPAANGVIHMLEGILLPPTILPILPKHCD 656
Query: 515 SDVSTAVDLFRQAGLGSHLSGNERLTLLAPMNSVFKDGTPR 637
+ Q LGS + T + P NSV D P+
Sbjct: 657 EEQ-------HQTVLGSCVDCQALNTSVCPPNSVKMDIFPK 690
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 68,034,480
Number of extensions: 1878428
Number of successful extensions: 5801
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 5736
Number of HSP's successfully gapped: 17
Length of query: 670
Length of database: 15,617,559
Length adjustment: 108
Effective length of query: 562
Effective length of database: 12,373,671
Effective search space: 6954003102
Effective search space used: 6954003102
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-001413
(2012 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001193280.1| periostin, osteoblast specific factor isofor... 323 2e-88
Alignment gi|NP_001193276.1| periostin, osteoblast specific factor isofor... 323 2e-88
Alignment gi|XP_003354334.1| PREDICTED: transforming growth factor-beta-i... 230 3e-60
Alignment gi|XP_003132304.1| PREDICTED: stabilin-1-like [Sus scrofa]. 61 3e-09
Alignment gi|XP_003355706.1| PREDICTED: stabilin-2 [Sus scrofa]. 52 1e-06
>ref|NP_001193280.1| periostin, osteoblast specific factor isoform 2 [Sus scrofa].
Length = 781
Score = 323 bits (829), Expect = 2e-88
Identities = 173/423 (40%), Positives = 254/423 (60%), Gaps = 3/423 (0%)
Frame = +2
Query: 2 ARLLKADHHATNGVVHLIDKVISTVTNNIQQIIEIEDTFETLRAAVAASGLNTLLEGDGQ 181
AR++ + ATNGVVH+ID+V++ + +IQ IE ED + RAA S + L DG
Sbjct: 209 ARIIHGNQIATNGVVHVIDRVLTQIGTSIQDFIEAEDDLSSFRAAAITSDILESLGRDGH 268
Query: 182 YTLLAPTNEAFEKIPAETLNRILGDPEALRDLLNNHILKSAMCAEAIVAXXXXXXXXXXX 361
+TL APTNEAFEK+P L RI+GD A L+ HIL + C+EAI +
Sbjct: 269 FTLFAPTNEAFEKLPRGVLERIMGDKVASEALMKYHILNTLQCSEAITSGAVFETLEGNT 328
Query: 362 XXXXCSGDMLTINGKPIISNKDVLAINGVIHFIDELLIPDSAKTLFELAAESDVSTAVDL 541
C GD +T+NG +++ KD++ NGVIH ID++LIPDSAK + ELA +T DL
Sbjct: 329 IEIGCDGDSITVNGIKMVNKKDIVTNNGVIHLIDQVLIPDSAKQVIELAGNQQ-TTFTDL 387
Query: 542 FRQAGLGSHLSGNERLTLLAPMNSVFKDGTPRIDARTKNLLL-NHMIKDQLASKYLYHGQ 718
Q GL S L + TLLAP+N+ F D T +D R L+L NH++K ++ LY+GQ
Sbjct: 388 VAQLGLASALRPDGEYTLLAPVNNAFSDDTLSMDQRLLKLILQNHILKVKVGLNELYNGQ 447
Query: 719 TLDTLGGKKLRVFVYRNSLCIENSCIAAHDKRGRYGTLFTMDRMLTPPMGTVMDVLKGDN 898
L+T+GGK+LRVFVYR ++CIENSC+ K+GR G + ++ P ++ + LK D
Sbjct: 448 KLETIGGKQLRVFVYRTAVCIENSCMVRGSKQGRNGAIHIFREIIKPAEKSLHEKLKQDK 507
Query: 899 RFSMLVAAIQSAGLTETLNREGVYTVFAPTNEAFQALPLGERNKLLGNAKELANILKYHV 1078
RFS+ ++ +++A L E L + G +T+F PTN+AF+ + E+ L+ + L NI+ YH+
Sbjct: 508 RFSIFLSLLEAADLKELLTQPGDWTLFVPTNDAFKGMTNEEKEILIRDKNALQNIILYHL 567
Query: 1079 GDEILVSGGI--GALVRLKSLQGDKLEVSSKNSLVTVNKEPVAEADIMATNGVVHTINTV 1252
+ + G G LK+ QG K+ + N + VN+ E+DIM TNGV+H ++ +
Sbjct: 568 TPGVFIGKGFEPGVTNILKTTQGSKIYLKGVNDTLLVNELKSKESDIMTTNGVIHVVDKL 627
Query: 1253 LRP 1261
L P
Sbjct: 628 LYP 630
Score = 88.6 bits (218), Expect = 1e-17
Identities = 93/397 (23%), Positives = 165/397 (41%), Gaps = 17/397 (4%)
Frame = +2
Query: 146 SGLNTLLEGDGQYTLLAPTNEAFEKIPAETLNRILGDPEA-LRDLLNNHILKSAMCAEAI 322
S L +EG G +T AP+NEA++ + ++ + + L + L++H++ M + +
Sbjct: 120 SKLREEIEGKGSFTYFAPSNEAWDNLDSDIRRGLESNVNVELLNALHSHMVNKRMLTKDL 179
Query: 323 V--AXXXXXXXXXXXXXXXCSGDMLTINGKPIISNKDVLAINGVIHFIDELLIPDSAKTL 496
++T+N II + A NGV+H ID +L
Sbjct: 180 KNGMIIPSMYNNLGLFINHYPNGVVTVNCARIIHGNQI-ATNGVVHVIDRVLTQIGTSIQ 238
Query: 497 FELAAESDVSTAVDLFRQAGLGS----HLSGNERLTLLAPMNSVFKDGTPRIDAR----- 649
+ AE D+S+ FR A + S L + TL AP N F+ + R
Sbjct: 239 DFIEAEDDLSS----FRAAAITSDILESLGRDGHFTLFAPTNEAFEKLPRGVLERIMGDK 294
Query: 650 --TKNLLLNHMIKDQLASKYLYHGQTLDTLGGKKLRVFVYRNSLCIEN-SCIAAHDKRGR 820
++ L+ H++ S+ + G +TL G + + +S+ + + D
Sbjct: 295 VASEALMKYHILNTLQCSEAITSGAVFETLEGNTIEIGCDGDSITVNGIKMVNKKDIVTN 354
Query: 821 YGTLFTMDRMLTPPMGTVMDVLKGDNR--FSMLVAAIQSAGLTETLNREGVYTVFAPTNE 994
G + +D++L P + L G+ + F+ LVA + GL L +G YT+ AP N
Sbjct: 355 NGVIHLIDQVLIPDSAKQVIELAGNQQTTFTDLVAQL---GLASALRPDGEYTLLAPVNN 411
Query: 995 AFQALPLGERNKLLGNAKELANILKYHVGDEILVSGGIGALVRLKSLQGDKLEVSSKNSL 1174
AF L +LL + +ILK VG L +G +L+++ G +L V +
Sbjct: 412 AFSDDTLSMDQRLLKLILQ-NHILKVKVGLNELYNG-----QKLETIGGKQLRVFVYRTA 465
Query: 1175 VTVNKEPVAEADIMATNGVVHTINTVLRPPANKPQER 1285
V + + NG +H +++P E+
Sbjct: 466 VCIENSCMVRGSKQGRNGAIHIFREIIKPAEKSLHEK 502
>ref|NP_001193276.1| periostin, osteoblast specific factor isoform 1 [Sus scrofa].
Length = 836
Score = 323 bits (829), Expect = 2e-88
Identities = 173/423 (40%), Positives = 254/423 (60%), Gaps = 3/423 (0%)
Frame = +2
Query: 2 ARLLKADHHATNGVVHLIDKVISTVTNNIQQIIEIEDTFETLRAAVAASGLNTLLEGDGQ 181
AR++ + ATNGVVH+ID+V++ + +IQ IE ED + RAA S + L DG
Sbjct: 209 ARIIHGNQIATNGVVHVIDRVLTQIGTSIQDFIEAEDDLSSFRAAAITSDILESLGRDGH 268
Query: 182 YTLLAPTNEAFEKIPAETLNRILGDPEALRDLLNNHILKSAMCAEAIVAXXXXXXXXXXX 361
+TL APTNEAFEK+P L RI+GD A L+ HIL + C+EAI +
Sbjct: 269 FTLFAPTNEAFEKLPRGVLERIMGDKVASEALMKYHILNTLQCSEAITSGAVFETLEGNT 328
Query: 362 XXXXCSGDMLTINGKPIISNKDVLAINGVIHFIDELLIPDSAKTLFELAAESDVSTAVDL 541
C GD +T+NG +++ KD++ NGVIH ID++LIPDSAK + ELA +T DL
Sbjct: 329 IEIGCDGDSITVNGIKMVNKKDIVTNNGVIHLIDQVLIPDSAKQVIELAGNQQ-TTFTDL 387
Query: 542 FRQAGLGSHLSGNERLTLLAPMNSVFKDGTPRIDARTKNLLL-NHMIKDQLASKYLYHGQ 718
Q GL S L + TLLAP+N+ F D T +D R L+L NH++K ++ LY+GQ
Sbjct: 388 VAQLGLASALRPDGEYTLLAPVNNAFSDDTLSMDQRLLKLILQNHILKVKVGLNELYNGQ 447
Query: 719 TLDTLGGKKLRVFVYRNSLCIENSCIAAHDKRGRYGTLFTMDRMLTPPMGTVMDVLKGDN 898
L+T+GGK+LRVFVYR ++CIENSC+ K+GR G + ++ P ++ + LK D
Sbjct: 448 KLETIGGKQLRVFVYRTAVCIENSCMVRGSKQGRNGAIHIFREIIKPAEKSLHEKLKQDK 507
Query: 899 RFSMLVAAIQSAGLTETLNREGVYTVFAPTNEAFQALPLGERNKLLGNAKELANILKYHV 1078
RFS+ ++ +++A L E L + G +T+F PTN+AF+ + E+ L+ + L NI+ YH+
Sbjct: 508 RFSIFLSLLEAADLKELLTQPGDWTLFVPTNDAFKGMTNEEKEILIRDKNALQNIILYHL 567
Query: 1079 GDEILVSGGI--GALVRLKSLQGDKLEVSSKNSLVTVNKEPVAEADIMATNGVVHTINTV 1252
+ + G G LK+ QG K+ + N + VN+ E+DIM TNGV+H ++ +
Sbjct: 568 TPGVFIGKGFEPGVTNILKTTQGSKIYLKGVNDTLLVNELKSKESDIMTTNGVIHVVDKL 627
Query: 1253 LRP 1261
L P
Sbjct: 628 LYP 630
Score = 88.6 bits (218), Expect = 1e-17
Identities = 93/397 (23%), Positives = 165/397 (41%), Gaps = 17/397 (4%)
Frame = +2
Query: 146 SGLNTLLEGDGQYTLLAPTNEAFEKIPAETLNRILGDPEA-LRDLLNNHILKSAMCAEAI 322
S L +EG G +T AP+NEA++ + ++ + + L + L++H++ M + +
Sbjct: 120 SKLREEIEGKGSFTYFAPSNEAWDNLDSDIRRGLESNVNVELLNALHSHMVNKRMLTKDL 179
Query: 323 V--AXXXXXXXXXXXXXXXCSGDMLTINGKPIISNKDVLAINGVIHFIDELLIPDSAKTL 496
++T+N II + A NGV+H ID +L
Sbjct: 180 KNGMIIPSMYNNLGLFINHYPNGVVTVNCARIIHGNQI-ATNGVVHVIDRVLTQIGTSIQ 238
Query: 497 FELAAESDVSTAVDLFRQAGLGS----HLSGNERLTLLAPMNSVFKDGTPRIDAR----- 649
+ AE D+S+ FR A + S L + TL AP N F+ + R
Sbjct: 239 DFIEAEDDLSS----FRAAAITSDILESLGRDGHFTLFAPTNEAFEKLPRGVLERIMGDK 294
Query: 650 --TKNLLLNHMIKDQLASKYLYHGQTLDTLGGKKLRVFVYRNSLCIEN-SCIAAHDKRGR 820
++ L+ H++ S+ + G +TL G + + +S+ + + D
Sbjct: 295 VASEALMKYHILNTLQCSEAITSGAVFETLEGNTIEIGCDGDSITVNGIKMVNKKDIVTN 354
Query: 821 YGTLFTMDRMLTPPMGTVMDVLKGDNR--FSMLVAAIQSAGLTETLNREGVYTVFAPTNE 994
G + +D++L P + L G+ + F+ LVA + GL L +G YT+ AP N
Sbjct: 355 NGVIHLIDQVLIPDSAKQVIELAGNQQTTFTDLVAQL---GLASALRPDGEYTLLAPVNN 411
Query: 995 AFQALPLGERNKLLGNAKELANILKYHVGDEILVSGGIGALVRLKSLQGDKLEVSSKNSL 1174
AF L +LL + +ILK VG L +G +L+++ G +L V +
Sbjct: 412 AFSDDTLSMDQRLLKLILQ-NHILKVKVGLNELYNG-----QKLETIGGKQLRVFVYRTA 465
Query: 1175 VTVNKEPVAEADIMATNGVVHTINTVLRPPANKPQER 1285
V + + NG +H +++P E+
Sbjct: 466 VCIENSCMVRGSKQGRNGAIHIFREIIKPAEKSLHEK 502
>ref|XP_003354334.1| PREDICTED: transforming growth factor-beta-induced protein
ig-h3-like, partial [Sus scrofa].
Length = 196
Score = 230 bits (586), Expect = 3e-60
Identities = 119/119 (100%), Positives = 119/119 (100%)
Frame = +2
Query: 908 MLVAAIQSAGLTETLNREGVYTVFAPTNEAFQALPLGERNKLLGNAKELANILKYHVGDE 1087
MLVAAIQSAGLTETLNREGVYTVFAPTNEAFQALPLGERNKLLGNAKELANILKYHVGDE
Sbjct: 78 MLVAAIQSAGLTETLNREGVYTVFAPTNEAFQALPLGERNKLLGNAKELANILKYHVGDE 137
Query: 1088 ILVSGGIGALVRLKSLQGDKLEVSSKNSLVTVNKEPVAEADIMATNGVVHTINTVLRPP 1264
ILVSGGIGALVRLKSLQGDKLEVSSKNSLVTVNKEPVAEADIMATNGVVHTINTVLRPP
Sbjct: 138 ILVSGGIGALVRLKSLQGDKLEVSSKNSLVTVNKEPVAEADIMATNGVVHTINTVLRPP 196
Score = 70.5 bits (171), Expect = 3e-12
Identities = 37/118 (31%), Positives = 64/118 (54%)
Frame = +2
Query: 125 LRAAVAASGLNTLLEGDGQYTLLAPTNEAFEKIPAETLNRILGDPEALRDLLNNHILKSA 304
L AA+ ++GL L +G YT+ APTNEAF+ +P N++LG+ + L ++L H+
Sbjct: 79 LVAAIQSAGLTETLNREGVYTVFAPTNEAFQALPLGERNKLLGNAKELANILKYHVGDEI 138
Query: 305 MCAEAIVAXXXXXXXXXXXXXXXCSGDMLTINGKPIISNKDVLAINGVIHFIDELLIP 478
+ + I A ++T+N +P ++ D++A NGV+H I+ +L P
Sbjct: 139 LVSGGIGALVRLKSLQGDKLEVSSKNSLVTVNKEP-VAEADIMATNGVVHTINTVLRP 195
>ref|XP_003132304.1| PREDICTED: stabilin-1-like [Sus scrofa].
Length = 2400
Score = 60.8 bits (146), Expect = 3e-09
Identities = 44/149 (29%), Positives = 70/149 (46%), Gaps = 10/149 (6%)
Frame = +2
Query: 860 PMGTVMDVLKGDNRFSMLVAAIQSAGLTETLNREGVYTVFAPTNEAFQALPLGERNKLL- 1036
P T+ +L FS +++ GL L+ G +TVFAP+NEA L G L
Sbjct: 503 PTRTISQILASTEAFSRFETILENCGLPSFLDGPGPFTVFAPSNEAVDGLRDGRLVYLFT 562
Query: 1037 GNAKELANILKYHVGD------EILVSGGIGALVRLKSLQGDKLEVS-SKNSLVTVNKE- 1192
+L +++YHV E L+S G R+ ++ L V+ S+ + + E
Sbjct: 563 AGLSKLQELVRYHVYSHGQLTVEKLISKG-----RVLTMANQVLAVNISEEGRILLGPEG 617
Query: 1193 -PVAEADIMATNGVVHTINTVLRPPANKP 1276
P+ D++A NGV+H + +L PP P
Sbjct: 618 VPLRRVDVLAANGVIHMLEGILLPPTILP 646
Score = 55.1 bits (131), Expect = 1e-07
Identities = 51/220 (23%), Positives = 89/220 (40%), Gaps = 13/220 (5%)
Frame = +2
Query: 14 KADHHATNGVVHLID--------KVISTVTNNIQQIIEIEDTFETLRAAVAASGLNTLLE 169
KA++ A NGV H++ ++ T I QI+ + F + GL + L+
Sbjct: 475 KANYPAANGVFHMVTALRWQPPPELPENPTRTISQILASTEAFSRFETILENCGLPSFLD 534
Query: 170 GDGQYTLLAPTNEAFEKI-PAETLNRILGDPEALRDLLNNHILK-SAMCAEAIVAXXXXX 343
G G +T+ AP+NEA + + + L++L+ H+ + E +++
Sbjct: 535 GPGPFTVFAPSNEAVDGLRDGRLVYLFTAGLSKLQELVRYHVYSHGQLTVEKLISKGRVL 594
Query: 344 XXXXXXXXXXCSGD---MLTINGKPIISNKDVLAINGVIHFIDELLIPDSAKTLFELAAE 514
S + +L G P + DVLA NGVIH ++ +L+P + +
Sbjct: 595 TMANQVLAVNISEEGRILLGPEGVP-LRRVDVLAANGVIHMLEGILLPPTILPILPKICN 653
Query: 515 SDVSTAVDLFRQAGLGSHLSGNERLTLLAPMNSVFKDGTP 634
+ V GS + T + P NS D +P
Sbjct: 654 EEQHKVV-------AGSCVDCQALNTSMCPPNSTKLDISP 686
>ref|XP_003355706.1| PREDICTED: stabilin-2 [Sus scrofa].
Length = 2360
Score = 52.0 bits (123), Expect = 1e-06
Identities = 39/120 (32%), Positives = 57/120 (47%), Gaps = 7/120 (5%)
Frame = +2
Query: 923 IQSAGLTETLNREGVYTVFAPTNEAFQALPLGERNKLLGNAKELANILKYHVGDEILVSG 1102
I SA L L+ TV P+ +A + L E+ L + + ++KYH +L +
Sbjct: 1002 INSASLQPLLSATSNLTVLVPSRQAIEDLDQEEKAFWLTKSN-IPALIKYHT---LLGTY 1057
Query: 1103 GIGALVRLK-------SLQGDKLEVSSKNSLVTVNKEPVAEADIMATNGVVHTINTVLRP 1261
G+ L L SLQG L ++ N +T+ V + D ATNGV+H IN VL P
Sbjct: 1058 GVADLQALSPSDMLATSLQGSFLHLAKVNGNITIEGASVIDGDNAATNGVIHIINKVLLP 1117
Score = 51.2 bits (121), Expect = 2e-06
Identities = 33/102 (32%), Positives = 54/102 (52%), Gaps = 2/102 (1%)
Frame = +2
Query: 962 GVYTVFAPTNEAFQALPLGERNKLLGNAKELANILKYHV-GDEILVSGGIGALVRLKSLQ 1138
G +TV AP++ AF A P + K + +L+YHV L+ + + SLQ
Sbjct: 1616 GPFTVLAPSSAAFDAEP---QIKNWDKQGLMPQVLRYHVIACHQLLLENLKSTPNATSLQ 1672
Query: 1139 GDKLEVSSKNSLVTVN-KEPVAEADIMATNGVVHTINTVLRP 1261
G+ L +S V +N K + +DI++TNG++H I+ +L P
Sbjct: 1673 GESLTISVSQGTVFINNKAKIISSDIISTNGIIHIIDKLLSP 1714
Score = 50.4 bits (119), Expect = 4e-06
Identities = 38/154 (24%), Positives = 77/154 (50%), Gaps = 11/154 (7%)
Frame = +2
Query: 869 TVMDVLKGDNRFSMLVAAIQSAGLTETLNREGV---YTVFAPTNEAFQALPLGERNKLLG 1039
T+M +L+ R+S + ++ + L+ +GV YT+F P+NEA + G + LL
Sbjct: 508 TIMTMLQP--RYSKFRSLLEETNMGHALDEDGVGGPYTIFVPSNEALNNMKDGALDYLLS 565
Query: 1040 N--AKELANILKYHVGDEILVSGGIGALVRLKSLQGDKLEV----SSKNSLVTVNKEPVA 1201
+ +++L +++YH+ + + L+ ++ +V ++ N + N +
Sbjct: 566 SEGSRKLLELVRYHIVPFTQLE--VATLISTPHIRSMANQVIRFNTTDNGQILANGVAME 623
Query: 1202 EADIMATNGVVHTINTVLRPPANKP--QERGDEL 1297
E ++ A NG ++T+ VL PP+ P R DE+
Sbjct: 624 ETEVAAKNGRIYTLTGVLIPPSITPVLPHRCDEM 657
Score = 50.1 bits (118), Expect = 5e-06
Identities = 66/286 (23%), Positives = 111/286 (38%), Gaps = 30/286 (10%)
Frame = +2
Query: 506 AAESDVSTAVDLFRQ----AGLGSHLSGNERLTLLAPMNSVFKDGTPRIDARTKNLLLNH 673
A E +A +F Q A L LS LT+L P +D +D K L
Sbjct: 986 AVELSFLSAAAVFNQWINSASLQPLLSATSNLTVLVPSRQAIED----LDQEEKAFWLT- 1040
Query: 674 MIKDQLASKYLYHG----------QTLD-------TLGGKKLRVFVYRNSLCIENSCIAA 802
K + + YH Q L +L G L + ++ IE + +
Sbjct: 1041 --KSNIPALIKYHTLLGTYGVADLQALSPSDMLATSLQGSFLHLAKVNGNITIEGASVID 1098
Query: 803 HDKRGRYGTLFTMDRMLTPPMG------TVMDVLKGDNRFSMLVAAIQSAGLTETLNREG 964
D G + ++++L P G ++ L +S+ I L T+
Sbjct: 1099 GDNAATNGVIHIINKVLLPQRGLTGSLPNLLTRLDQMPDYSIFRGYIIQYNLASTIEAAD 1158
Query: 965 VYTVFAPTNEAFQALPLGERNKLLGNAKELANILKYHVG-DEILVSGGIGALVRLKSLQG 1141
YTVFAP N+A ++ R K + +E ++L+YHV +E L+ + + +++ G
Sbjct: 1159 AYTVFAPNNDAIESY---IREKKVTTLEE--DVLRYHVVLEEKLLKNDLHTGMHRETMLG 1213
Query: 1142 DK--LEVSSKNSLVTVNKEPVAEADIMATNGVVHTINTVLRPPANK 1273
L N + VN+ P+ + GV+H + VL N+
Sbjct: 1214 FSYLLGFFLHNDQLYVNEAPINYTNAATDKGVIHGLGKVLEIQKNR 1259
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 50,689,993
Number of extensions: 1431254
Number of successful extensions: 4603
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 4567
Number of HSP's successfully gapped: 12
Length of query: 670
Length of database: 11,343,932
Length adjustment: 106
Effective length of query: 564
Effective length of database: 8,704,850
Effective search space: 4909535400
Effective search space used: 4909535400
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-001413
(2012 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr02 1221 0.0
>Sscrofa_Chr02
|| Length = 162569375
Score = 1221 bits (616), Expect = 0.0
Identities = 632/640 (98%)
Strand = Plus / Minus
Query: 1369 agcccctgtctatcagcggttattagagaggatgaagcattagtgagaaggaccacagga 1428
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143901266 agcccctgtctatcagcggttattagagaggatgaagcattagtgagaaggaccacagga 143901207
Query: 1429 ggaatgcatttcagcagctcccagccaacttctcccggttcaccaaagagactgtatgtt 1488
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143901206 ggaatgcatttcagcagctcccagccaacttctcccggttcaccaaagagactgtatgtt 143901147
Query: 1489 tttgaaagcagttatcacacttcaatgtacatgggccacatcataatgagatcggagcct 1548
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143901146 tttgaaagcagttatcacacttcaatgtacatgggccacatcataatgagatcggagcct 143901087
Query: 1549 cgggtgggtggcnnnnnnnnagggagagagagatgattttaacttttccccctaatcatg 1608
|||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 143901086 cgggtgggtggcggggggggagggagagagagatgattttaacttttccccctaatcatg 143901027
Query: 1609 gctgttaggccactgcctgcagagacctagatgtccctgcccgacattcgcttccagaaa 1668
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143901026 gctgttaggccactgcctgcagagacctagatgtccctgcccgacattcgcttccagaaa 143900967
Query: 1669 ggacctttcccaaacgtgggatttcgtgcctatgccacgtactctggaaaagggaaccga 1728
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143900966 ggacctttcccaaacgtgggatttcgtgcctatgccacgtactctggaaaagggaaccga 143900907
Query: 1729 agggtctaaagcccacgaaacctgaatcaagcaatccatcatcatgggaacgtcatggca 1788
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143900906 agggtctaaagcccacgaaacctgaatcaagcaatccatcatcatgggaacgtcatggca 143900847
Query: 1789 cgatttttgaaaagttctttcacagctggagaaatggcatccttataagctatgagttga 1848
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143900846 cgatttttgaaaagttctttcacagctggagaaatggcatccttataagctatgagttga 143900787
Query: 1849 gctgctctgtcaaatatttctcgcgcctacacgtggcttggactcttccgtgtgaccctg 1908
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143900786 gctgctctgtcaaatatttctcgcgcctacacgtggcttggactcttccgtgtgaccctg 143900727
Query: 1909 tccaggtagaaagagaggtaggcagagcacacagagctcaggattccccaggtttggcag 1968
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143900726 tccaggtagaaagagaggtaggcagagcacacagagctcaggattccccaggtttggcag 143900667
Query: 1969 agccgtggtgtgtttgtaataataaaaccaaagaaacaga 2008
||||||||||||||||||||||||||||||||||||||||
Sbjct: 143900666 agccgtggtgtgtttgtaataataaaaccaaagaaacaga 143900627
Score = 418 bits (211), Expect = e-114
Identities = 214/215 (99%)
Strand = Plus / Plus
Query: 271 agacctcttaaacaaccacatcttgaagtcggccatgtgtgcagaagccatcgtggcggg 330
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143878150 agacctcttaaacaaccacatcttgaagtcggccatgtgtgcagaagccatcgtggcggg 143878209
Query: 331 gctgtccctagagaccctggagggcaccacgctggaggtgggctgcagcggggacatgct 390
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143878210 gctgtccctagagaccctggagggcaccacgctggaggtgggctgcagcggggacatgct 143878269
Query: 391 caccatcaacggcaagcccatcatctccaacaaggacgtcctggccatcaacggcgtgat 450
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 143878270 caccatcaacggcaagcccatcatctccaacaaggacgtcctggccaccaacggcgtgat 143878329
Query: 451 ccacttcattgacgagctgctcatcccggactcag 485
|||||||||||||||||||||||||||||||||||
Sbjct: 143878330 ccacttcattgacgagctgctcatcccggactcag 143878364
Score = 293 bits (148), Expect = 2e-76
Identities = 148/148 (100%)
Strand = Plus / Plus
Query: 622 agacggaacccctcggattgacgcccggacgaagaatttgcttctgaaccacatgattaa 681
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143879867 agacggaacccctcggattgacgcccggacgaagaatttgcttctgaaccacatgattaa 143879926
Query: 682 agatcagctggcctccaagtacctgtaccatggacagaccctggacactctgggtggcaa 741
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143879927 agatcagctggcctccaagtacctgtaccatggacagaccctggacactctgggtggcaa 143879986
Query: 742 aaaactgagagtttttgtttatcggaat 769
||||||||||||||||||||||||||||
Sbjct: 143879987 aaaactgagagtttttgtttatcggaat 143880014
Score = 283 bits (143), Expect = 2e-73
Identities = 143/143 (100%)
Strand = Plus / Plus
Query: 130 ggctgccgtggctgcatctgggctcaacaccctgctcgaaggggacggccagtacacact 189
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143875007 ggctgccgtggctgcatctgggctcaacaccctgctcgaaggggacggccagtacacact 143875066
Query: 190 cttggccccgaccaatgaggccttcgagaagatccctgctgagaccttgaaccggatcct 249
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143875067 cttggccccgaccaatgaggccttcgagaagatccctgctgagaccttgaaccggatcct 143875126
Query: 250 gggtgacccagaggccctgagag 272
|||||||||||||||||||||||
Sbjct: 143875127 gggtgacccagaggccctgagag 143875149
Score = 268 bits (135), Expect = 1e-68
Identities = 135/135 (100%)
Strand = Plus / Plus
Query: 904 cagcatgctggtagccgccatccagtctgcagggctgaccgagaccctgaaccgggaagg 963
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143902814 cagcatgctggtagccgccatccagtctgcagggctgaccgagaccctgaaccgggaagg 143902873
Query: 964 ggtctacaccgtctttgcacctaccaatgaagccttccaggccctgcccctgggagaacg 1023
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143902874 ggtctacaccgtctttgcacctaccaatgaagccttccaggccctgcccctgggagaacg 143902933
Query: 1024 gaacaaactcttggg 1038
|||||||||||||||
Sbjct: 143902934 gaacaaactcttggg 143902948
Score = 264 bits (133), Expect = 2e-67
Identities = 140/141 (99%), Gaps = 1/141 (0%)
Strand = Plus / Plus
Query: 483 cagccaagacgctatttgagttggctgccgagtcggatgtttccacagccgttgaccttt 542
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143879143 cagccaagacgctatt-gagttggctgccgagtcggatgtttccacagccgttgaccttt 143879201
Query: 543 tcagacaagctggcctcggctctcatctctccggaaatgagcggttgactctcctggccc 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143879202 tcagacaagctggcctcggctctcatctctccggaaatgagcggttgactctcctggccc 143879261
Query: 603 ccatgaattccgtcttcaaag 623
|||||||||||||||||||||
Sbjct: 143879262 ccatgaattccgtcttcaaag 143879282
Score = 260 bits (131), Expect = 3e-66
Identities = 131/131 (100%)
Strand = Plus / Plus
Query: 1 tgctcggctgctgaaagccgaccaccacgcgaccaacggcgtggtgcacctcatcgataa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143873007 tgctcggctgctgaaagccgaccaccacgcgaccaacggcgtggtgcacctcatcgataa 143873066
Query: 61 ggtcatctccaccgtcaccaacaacatccagcagatcatcgagatcgaggacaccttcga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143873067 ggtcatctccaccgtcaccaacaacatccagcagatcatcgagatcgaggacaccttcga 143873126
Query: 121 gacccttcggg 131
|||||||||||
Sbjct: 143873127 gacccttcggg 143873137
Score = 250 bits (126), Expect = 3e-63
Identities = 126/126 (100%)
Strand = Plus / Plus
Query: 1037 ggcaatgccaaggagcttgccaacatcctgaaataccatgttggcgatgaaatcctggtg 1096
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143905284 ggcaatgccaaggagcttgccaacatcctgaaataccatgttggcgatgaaatcctggtg 143905343
Query: 1097 agtgggggcatcggggctctggtgcggctgaagtctctccaaggtgacaagctggaagtc 1156
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143905344 agtgggggcatcggggctctggtgcggctgaagtctctccaaggtgacaagctggaagtc 143905403
Query: 1157 agctcg 1162
||||||
Sbjct: 143905404 agctcg 143905409
Score = 206 bits (104), Expect = 3e-50
Identities = 104/104 (100%)
Strand = Plus / Plus
Query: 1162 gaaaaacagcctggtgactgtcaataaggaacctgtggctgaagctgacatcatggccac 1221
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143907242 gaaaaacagcctggtgactgtcaataaggaacctgtggctgaagctgacatcatggccac 143907301
Query: 1222 caacggcgtggtccacaccatcaacactgtcctgcggcctccag 1265
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143907302 caacggcgtggtccacaccatcaacactgtcctgcggcctccag 143907345
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 52,837,202
Number of extensions: 264
Number of successful extensions: 264
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 264
Number of HSP's successfully gapped: 10
Length of query: 2012
Length of database: 2,808,509,378
Length adjustment: 22
Effective length of query: 1990
Effective length of database: 2,808,408,574
Effective search space: 5588733062260
Effective search space used: 5588733062260
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)