Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-001481
(1122 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_776758.2| protein disulfide-isomerase A3 precursor [Bos t... 550 e-157
Alignment gi|NP_001039344.1| protein disulfide-isomerase A4 precursor [Bo... 165 6e-41
Alignment gi|NP_776560.1| protein disulfide-isomerase precursor [Bos taur... 142 4e-34
Alignment gi|NP_001092331.1| protein disulfide-isomerase A2 [Bos taurus]. 115 7e-26
Alignment gi|NP_001193274.1| protein disulfide-isomerase A6 [Bos taurus]. 113 3e-25
Alignment gi|XP_002691152.1| PREDICTED: PDIA6 protein-like [Bos taurus]. 110 3e-24
Alignment gi|XP_589324.4| PREDICTED: PDIA6 protein-like [Bos taurus]. 110 3e-24
Alignment gi|NP_001193661.1| thioredoxin domain-containing protein 5 [Bos... 99 7e-21
Alignment gi|NP_001095759.1| protein disulfide-isomerase TMX3 [Bos taurus]. 87 4e-17
Alignment gi|NP_001039556.1| protein disulfide-isomerase A5 precursor [Bo... 75 1e-13
>ref|NP_776758.2| protein disulfide-isomerase A3 precursor [Bos taurus].
Length = 505
Score = 550 bits (1417), Expect = e-157
Identities = 268/295 (90%), Positives = 279/295 (94%)
Frame = +1
Query: 166 MRLCRLALFPGVXXXXXXXXXXXXSDVLELTDDNFESRISDTGSAGLMLVEFFAPWCGHC 345
MRL RLALFPG+ SDVLELTDDNFESRI+DTGS+GLMLVEFFAPWCGHC
Sbjct: 1 MRLRRLALFPGLALLLAAARLAAASDVLELTDDNFESRITDTGSSGLMLVEFFAPWCGHC 60
Query: 346 KRLAPEYEAAATRLKGIVPLAKVDCTANTNTCNKYGVSGYPTLKIFRDGEEAGAYDGPRT 525
K+LAPEYEAAATRLKGIVPLAKVDCTANTNTCNKYGVSGYPTLKIFRDGEE+GAYDGPRT
Sbjct: 61 KKLAPEYEAAATRLKGIVPLAKVDCTANTNTCNKYGVSGYPTLKIFRDGEESGAYDGPRT 120
Query: 526 ADGIVSHLKKQAGPASVPLRTEEEFEKFISDKDASVVGFFKDLFSEAHSEFLKAASNLRD 705
ADGIVSHLKKQAGPASVPL++EEEFEKFISDKDASVVGFFKDLFSEAHSEFLKAASNLRD
Sbjct: 121 ADGIVSHLKKQAGPASVPLKSEEEFEKFISDKDASVVGFFKDLFSEAHSEFLKAASNLRD 180
Query: 706 NYRFAHTNVESLVDKYDDDGEGITLFRPLHLMNKFEDKTVAYTEPKMTSGKIKKFIQENI 885
NYRFAHTNVESLV+KYDDDGEGITLFRP HL NKFEDKTVAYTE KMTSGKIK+FIQENI
Sbjct: 181 NYRFAHTNVESLVNKYDDDGEGITLFRPSHLTNKFEDKTVAYTEQKMTSGKIKRFIQENI 240
Query: 886 FGICPHMTEDNKDLIQGKDLLLAYYDVDYEKNAKGSNYWRNRVMMVAKKFLDAGK 1050
FGICPHMTEDNKDL+QGKDLL+AYYDVDYEKNAKGSNYWRNRVMMVAKKFLDAGK
Sbjct: 241 FGICPHMTEDNKDLLQGKDLLIAYYDVDYEKNAKGSNYWRNRVMMVAKKFLDAGK 295
Score = 67.4 bits (163), Expect = 2e-11
Identities = 39/119 (32%), Positives = 69/119 (57%), Gaps = 4/119 (3%)
Frame = +1
Query: 262 DNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRLK--GIVPLAKVDCTANTN 435
+NF+ +++ +L+EF+APWCGHCK L P+Y+ +L+ + +AK+D TAN +
Sbjct: 384 ENFDEIVNNENKD--VLIEFYAPWCGHCKNLEPKYKELGEKLRKDPNIVIAKMDATAN-D 440
Query: 436 TCNKYGVSGYPTLKIFRDGEEAG--AYDGPRTADGIVSHLKKQAGPASVPLRTEEEFEK 606
+ Y V G+PT+ ++ Y+G R +S+LK++A + P+ EE+ +K
Sbjct: 441 VPSPYEVRGFPTIYFSPANKKQNPKKYEGGRELSDFISYLKREA--TNPPVIQEEKPKK 497
>ref|NP_001039344.1| protein disulfide-isomerase A4 precursor [Bos taurus].
Length = 643
Score = 165 bits (418), Expect = 6e-41
Identities = 95/269 (35%), Positives = 153/269 (56%), Gaps = 6/269 (2%)
Frame = +1
Query: 247 LELTDDNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRLKGI---VPLAKVD 417
L LT DNF+ ++D A ++LVEF+APWCGHCK+LAPEYE AA L +PLAKVD
Sbjct: 179 LVLTKDNFDEVVND---ADIILVEFYAPWCGHCKKLAPEYEKAAKELSKSSPPIPLAKVD 235
Query: 418 CTANTNTCNKYGVSGYPTLKIFRDGEEAGAYDGPRTADGIVSHLKKQAGPASVPLRTEEE 597
A T+ ++ VS YPTLKIFR G +A +Y+GPR GIV ++ +Q+GP S + ++
Sbjct: 236 AIAETDLAKRFDVSSYPTLKIFRKG-KAFSYNGPREKYGIVDYMMEQSGPPSKQILALKQ 294
Query: 598 FEKFISD-KDASVVGFFKDLFSEAHSEFLKAASNLRDNYRFAHTNVESLVDKYDDDGEGI 774
++F+ D D ++G FK A+ + AA++LR++Y+F HT + +
Sbjct: 295 VQEFLKDGDDVIIIGVFKSESDPAYQLYQDAANSLREDYKFHHTFSTEIAKFLKVSLGKL 354
Query: 775 TLFRPLHLMNKFEDKT-VAYTEPKMTSGKIKKFIQENIFGICPHMTEDNKDLIQGKDLLL 951
+ +P +K+E K+ V + + I + + ++ + H + + L++
Sbjct: 355 VVMQPEKFQSKYEPKSYVMDIKDSTEAAAITEHVVKHTLPLVGHRKAADAKRYTRRPLVV 414
Query: 952 AYYDVDYEKNAK-GSNYWRNRVMMVAKKF 1035
YY VD+ + + + +WRN+V+ VAK F
Sbjct: 415 VYYSVDFSFDYRAATQFWRNKVLEVAKDF 443
Score = 108 bits (269), Expect = 1e-23
Identities = 61/164 (37%), Positives = 97/164 (59%), Gaps = 12/164 (7%)
Frame = +1
Query: 244 VLELTDDNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRLK---GIVPLAKV 414
VL L D NF++ ++D + +L+EF+APWCGHCK+ APEYE A LK +P+AK+
Sbjct: 63 VLILNDANFDNFVADKDT---VLLEFYAPWCGHCKQFAPEYEKIAATLKENDPPIPVAKI 119
Query: 415 DCTANTNTCNKYGVSGYPTLKIFRDGEEAGAYDGPRTADGIVSHLKKQAGPASVP----- 579
D T+ + +++ VSGYPT+KI + G+E Y+G RT + IV+ +K+ + P P
Sbjct: 120 DATSESALASRFDVSGYPTIKILKKGQEVD-YEGSRTQEEIVAKVKEVSQPNWTPPPEVT 178
Query: 580 -LRTEEEFEKFISDKDASVVGFFKDLFSEAHS---EFLKAASNL 699
+ T++ F++ ++D D +V F+ E+ KAA L
Sbjct: 179 LVLTKDNFDEVVNDADIILVEFYAPWCGHCKKLAPEYEKAAKEL 222
Score = 69.7 bits (169), Expect = 4e-12
Identities = 38/102 (37%), Positives = 59/102 (57%), Gaps = 5/102 (4%)
Frame = +1
Query: 307 MLVEFFAPWCGHCKRLAPEYEAAATRLKG--IVPLAKVDCTANTNTCNKYGVSGYPTLKI 480
+L+EF+APWCGHCK+L P Y + + KG + +AK+D TAN T ++Y V G+PT+
Sbjct: 544 VLIEFYAPWCGHCKQLEPVYTSLGKKYKGHKNLVIAKMDATANDVTSDRYKVEGFPTIYF 603
Query: 481 FRDGEEAGAY---DGPRTADGIVSHLKKQAGPASVPLRTEEE 597
G++ DG R + + +++ A S RT+EE
Sbjct: 604 APSGDKKKPIKFEDGNRDLEHLSKFIEEHATKLS---RTKEE 642
>ref|NP_776560.1| protein disulfide-isomerase precursor [Bos taurus].
Length = 510
Score = 142 bits (359), Expect = 4e-34
Identities = 88/239 (36%), Positives = 131/239 (54%), Gaps = 5/239 (2%)
Frame = +1
Query: 244 VLELTDDNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRLK---GIVPLAKV 414
VL L NF+ ++ + +LVEF+APWCGHCK LAPEY AA +LK + LAKV
Sbjct: 28 VLVLHKGNFDEALA---AHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKV 84
Query: 415 DCTANTNTCNKYGVSGYPTLKIFRDGEEAG--AYDGPRTADGIVSHLKKQAGPASVPLRT 588
D T ++ +YGV GYPT+K F++G+ A Y R AD IV+ LKK+ GPA+ L
Sbjct: 85 DATEESDLAQQYGVRGYPTIKFFKNGDTASPKEYTAGREADDIVNWLKKRTGPAASTLSD 144
Query: 589 EEEFEKFISDKDASVVGFFKDLFSEAHSEFLKAASNLRDNYRFAHTNVESLVDKYDDDGE 768
E + + +V+GFFKD+ S++ +F AA + D+ F T+ + KY D +
Sbjct: 145 GAAAEALVESSEVAVIGFFKDMESDSAKQFFLAAEVI-DDIPFGITSNSDVFSKYQLDKD 203
Query: 769 GITLFRPLHLMNKFEDKTVAYTEPKMTSGKIKKFIQENIFGICPHMTEDNKDLIQGKDL 945
G+ LF+ KF++ + E ++T K+ FI+ N + TE I G ++
Sbjct: 204 GVVLFK------KFDEGRNNF-EGEVTKEKLLDFIKHNQLPLVIEFTEQTAPKIFGGEI 255
Score = 60.8 bits (146), Expect = 2e-09
Identities = 40/104 (38%), Positives = 52/104 (50%), Gaps = 4/104 (3%)
Frame = +1
Query: 253 LTDDNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRLKG--IVPLAKVDCTA 426
L NFE D + VEF+APWCGHCK+LAP ++ K + +AK+D TA
Sbjct: 374 LVGKNFEEVAFDEKKN--VFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMDSTA 431
Query: 427 NTNTCNKYGVSGYPTLKIFRDGEEAGA--YDGPRTADGIVSHLK 552
N K V +PTLK F + Y+G RT DG L+
Sbjct: 432 NEVEAVK--VHSFPTLKFFPASADRTVIDYNGERTLDGFKKFLE 473
>ref|NP_001092331.1| protein disulfide-isomerase A2 [Bos taurus].
Length = 489
Score = 115 bits (288), Expect = 7e-26
Identities = 66/165 (40%), Positives = 89/165 (53%), Gaps = 5/165 (3%)
Frame = +1
Query: 307 MLVEFFAPWCGHCKRLAPEYEAAATRL---KGIVPLAKVDCTANTNTCNKYGVSGYPTLK 477
+LVEF+APWCGHC+ LAPEY AA L V LAKVD A ++ V+ YPTLK
Sbjct: 71 LLVEFYAPWCGHCRALAPEYSKAAALLAAESARVTLAKVDGPAEPELAEEFAVTEYPTLK 130
Query: 478 IFRDGEEAGA--YDGPRTADGIVSHLKKQAGPASVPLRTEEEFEKFISDKDASVVGFFKD 651
FR+G Y GPR A+GI L+++ GP++ L EE+ +D VVGFF+D
Sbjct: 131 FFREGNRTHPEEYTGPREAEGIAEWLRRRVGPSARQLEDEEDIRALTDTRDVVVVGFFQD 190
Query: 652 LFSEAHSEFLKAASNLRDNYRFAHTNVESLVDKYDDDGEGITLFR 786
L + FL A + D F T+ L K+ + + LF+
Sbjct: 191 LQDRDVATFLGLAQDALD-MTFGLTDRPQLFQKFGLTKDTVVLFK 234
Score = 54.7 bits (130), Expect = 1e-07
Identities = 28/83 (33%), Positives = 40/83 (48%)
Frame = +1
Query: 244 VLELTDDNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRLKGIVPLAKVDCT 423
V L NFE D + ++F+APWC HCK +AP +E A + + + +
Sbjct: 399 VKTLVGKNFEQVAFDETKN--VFIKFYAPWCAHCKEMAPAWEELAEKYRDHEDVIIAELD 456
Query: 424 ANTNTCNKYGVSGYPTLKIFRDG 492
A N + V G+PTLK F G
Sbjct: 457 ATANELEAFPVHGFPTLKYFPAG 479
>ref|NP_001193274.1| protein disulfide-isomerase A6 [Bos taurus].
Length = 440
Score = 113 bits (282), Expect = 3e-25
Identities = 66/170 (38%), Positives = 90/170 (52%), Gaps = 12/170 (7%)
Frame = +1
Query: 241 DVLELTDDNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRLK----GIVPLA 408
DV+ELTDDNF+ + D S + +VEF+APWCGHCK L PE+ AAAT +K G V LA
Sbjct: 161 DVIELTDDNFDKNVLD--SEDVWMVEFYAPWCGHCKNLEPEWAAAATEVKEQTKGKVKLA 218
Query: 409 KVDCTANTNTCNKYGVSGYPTLKIFRDGEEAGAYDGPRTADGIVSHL-----KKQAGPAS 573
VD T N ++YG+ G+PT+KIF+ GE YDG RT IVS P
Sbjct: 219 AVDATVNQVLASRYGIRGFPTIKIFQKGESPVDYDGGRTRSDIVSRALDLFSDNAPPPEL 278
Query: 574 VPLRTEEEFEKFISDKDASVVGFFK---DLFSEAHSEFLKAASNLRDNYR 714
+ + E+ +K + VV D + + +L+ L D Y+
Sbjct: 279 LEIINEDVAKKTCEEHQLCVVAVLPHILDTGAAGRNSYLEVLLKLADKYK 328
Score = 94.0 bits (232), Expect = 2e-19
Identities = 47/101 (46%), Positives = 64/101 (63%), Gaps = 1/101 (0%)
Frame = +1
Query: 241 DVLELTDDNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRLKGIVPLAKVDC 420
DV+ELT NF + + S L LVEF+APWCGHC+RL PE++ AAT LK +V + VD
Sbjct: 26 DVIELTPSNFNREVIQSDS--LWLVEFYAPWCGHCQRLTPEWKKAATALKDVVKVGAVDA 83
Query: 421 TANTNTCNKYGVSGYPTLKIFRDGE-EAGAYDGPRTADGIV 540
+ + +YGV G+PT+KIF + + Y G RT + IV
Sbjct: 84 DKHQSLGGQYGVQGFPTIKIFGSNKNKPEDYQGGRTGEAIV 124
>ref|XP_002691152.1| PREDICTED: PDIA6 protein-like [Bos taurus].
Length = 440
Score = 110 bits (274), Expect = 3e-24
Identities = 64/170 (37%), Positives = 89/170 (52%), Gaps = 12/170 (7%)
Frame = +1
Query: 241 DVLELTDDNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRLK----GIVPLA 408
DV+ELTDDNF+ + D S + +VEF+APWCGHCK L PE+ AAAT +K G V LA
Sbjct: 161 DVIELTDDNFDKNVLD--SEDVWMVEFYAPWCGHCKNLEPEWAAAATEVKEQTKGKVKLA 218
Query: 409 KVDCTANTNTCNKYGVSGYPTLKIFRDGEEAGAYDGPRTADGIVSHLKKQAGPASVPLRT 588
VD + N ++YG+ G+PT+KIF+ GE YDG R IVS + P
Sbjct: 219 AVDASVNQVLASRYGIRGFPTIKIFQKGESPVDYDGGRRRSDIVSRALDLFSDNAPPPEL 278
Query: 589 EEEFEKFISDKD--------ASVVGFFKDLFSEAHSEFLKAASNLRDNYR 714
E + ++ K +VV D + + +L+ L D Y+
Sbjct: 279 LEIINEDVAKKTCEEHQLCVVAVVPHILDTGAAGRNSYLEVLLKLADKYK 328
Score = 88.6 bits (218), Expect = 9e-18
Identities = 45/101 (44%), Positives = 63/101 (62%), Gaps = 1/101 (0%)
Frame = +1
Query: 241 DVLELTDDNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRLKGIVPLAKVDC 420
DV+ELT NF + + S L LVEF+APWCGHC+RL PE++ AAT LK +V + VD
Sbjct: 26 DVIELTPSNFNREVIQSYS--LWLVEFYAPWCGHCQRLTPEWKKAATALKDVVKVGAVDA 83
Query: 421 TANTNTCNKYGVSGYPTLKIFRDGE-EAGAYDGPRTADGIV 540
+ + ++GV G+PT+KIF + + Y G T + IV
Sbjct: 84 DKHQSLGGQHGVQGFPTIKIFGSNKNKPEDYQGGGTGEAIV 124
>ref|XP_589324.4| PREDICTED: PDIA6 protein-like [Bos taurus].
Length = 440
Score = 110 bits (274), Expect = 3e-24
Identities = 64/170 (37%), Positives = 89/170 (52%), Gaps = 12/170 (7%)
Frame = +1
Query: 241 DVLELTDDNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRLK----GIVPLA 408
DV+ELTDDNF+ + D S + +VEF+APWCGHCK L PE+ AAAT +K G V LA
Sbjct: 161 DVIELTDDNFDKNVLD--SEDVWMVEFYAPWCGHCKNLEPEWAAAATEVKEQTKGKVKLA 218
Query: 409 KVDCTANTNTCNKYGVSGYPTLKIFRDGEEAGAYDGPRTADGIVSHLKKQAGPASVPLRT 588
VD + N ++YG+ G+PT+KIF+ GE YDG R IVS + P
Sbjct: 219 AVDASVNQVLASRYGIRGFPTIKIFQKGESPVDYDGGRRRSDIVSRALDLFSDNAPPPEL 278
Query: 589 EEEFEKFISDKD--------ASVVGFFKDLFSEAHSEFLKAASNLRDNYR 714
E + ++ K +VV D + + +L+ L D Y+
Sbjct: 279 LEIINEDVAKKTCEEHQLCVVAVVPHILDTGAAGRNSYLEVLLKLADKYK 328
Score = 88.6 bits (218), Expect = 9e-18
Identities = 45/101 (44%), Positives = 63/101 (62%), Gaps = 1/101 (0%)
Frame = +1
Query: 241 DVLELTDDNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRLKGIVPLAKVDC 420
DV+ELT NF + + S L LVEF+APWCGHC+RL PE++ AAT LK +V + VD
Sbjct: 26 DVIELTPSNFNREVIQSYS--LWLVEFYAPWCGHCQRLTPEWKKAATALKDVVKVGAVDA 83
Query: 421 TANTNTCNKYGVSGYPTLKIFRDGE-EAGAYDGPRTADGIV 540
+ + ++GV G+PT+KIF + + Y G T + IV
Sbjct: 84 DKHQSLGGQHGVQGFPTIKIFGSNKNKPEDYQGGGTGEAIV 124
>ref|NP_001193661.1| thioredoxin domain-containing protein 5 [Bos taurus].
Length = 437
Score = 99.0 bits (245), Expect = 7e-21
Identities = 49/109 (44%), Positives = 70/109 (64%), Gaps = 3/109 (2%)
Frame = +1
Query: 244 VLELTDDNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATR-LKGI--VPLAKV 414
VL LT+ NF+ I++ G+ ++F+APWCGHCK LAP +E + + G+ V +A+V
Sbjct: 329 VLALTERNFDDAIAE----GVTFIKFYAPWCGHCKDLAPTWEDLSKKEFPGLAEVTIAEV 384
Query: 415 DCTANTNTCNKYGVSGYPTLKIFRDGEEAGAYDGPRTADGIVSHLKKQA 561
DCTA N C+KY V GYPTL +FR GE+ G + G R D + + +QA
Sbjct: 385 DCTAERNLCSKYSVRGYPTLLLFRGGEKVGEHSGSRDLDSLHRFVLRQA 433
Score = 87.4 bits (215), Expect = 2e-17
Identities = 48/113 (42%), Positives = 65/113 (57%), Gaps = 5/113 (4%)
Frame = +1
Query: 250 ELTDDNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRLKG--IVPLAKVDCT 423
EL+ NFE ++ G ++FFAPWCGHCK LAP +E A L+ V + KVDCT
Sbjct: 198 ELSAGNFELHVAQ----GDHFIKFFAPWCGHCKALAPTWEQLALGLEHSETVKIGKVDCT 253
Query: 424 ANTNTCNKYGVSGYPTLKIFRDGEEAGAYDGPRTADGIVSHLKKQ---AGPAS 573
+ C+ V GYPTL FRDG++ Y G R D + +++ Q AGPA+
Sbjct: 254 QHYELCSGNQVRGYPTLLWFRDGKKVDQYKGKRDLDSLREYVQSQLQSAGPAA 306
Score = 85.9 bits (211), Expect = 6e-17
Identities = 45/105 (42%), Positives = 58/105 (55%), Gaps = 11/105 (10%)
Frame = +1
Query: 313 VEFFAPWCGHCKRLAPEYEAAATRLKGI----VPLAKVDCTANTNTCNKYGVSGYPTLKI 480
V FFAPWCGHC+RL P + A + + V +AKVDCTA++ C+ GV GYPTLK
Sbjct: 87 VMFFAPWCGHCQRLQPTWNDLADKYNSLEDAKVYVAKVDCTADSEVCSAQGVRGYPTLKF 146
Query: 481 FRDGEEAGAYDGPRTADGIVSHLKKQAG-------PASVPLRTEE 594
F+ G+EA Y GPR + + + PA P RT E
Sbjct: 147 FKPGQEAVKYQGPRDFQALEKWMLQTLNEEPPTPEPAVEPPRTPE 191
>ref|NP_001095759.1| protein disulfide-isomerase TMX3 [Bos taurus].
Length = 454
Score = 86.7 bits (213), Expect = 4e-17
Identities = 44/122 (36%), Positives = 72/122 (59%), Gaps = 3/122 (2%)
Frame = +1
Query: 247 LELTDDNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRLKGI---VPLAKVD 417
+E DD+F+ D + LV+F+APWCGHCK+L P + +K + V + K+D
Sbjct: 28 VEDLDDSFKENRKDD----IWLVDFYAPWCGHCKKLEPIWNEVGLEMKSLGSPVKVGKMD 83
Query: 418 CTANTNTCNKYGVSGYPTLKIFRDGEEAGAYDGPRTADGIVSHLKKQAGPASVPLRTEEE 597
T+ ++ +++GV GYPT+K+ + G+ A Y GPRT D I+ + +G PL +++
Sbjct: 84 ATSYSSIASEFGVRGYPTIKLLK-GDLAYNYRGPRTKDDIIEFAHRVSGALIRPLPSQQM 142
Query: 598 FE 603
FE
Sbjct: 143 FE 144
>ref|NP_001039556.1| protein disulfide-isomerase A5 precursor [Bos taurus].
Length = 521
Score = 75.1 bits (183), Expect = 1e-13
Identities = 58/214 (27%), Positives = 99/214 (46%), Gaps = 22/214 (10%)
Frame = +1
Query: 244 VLELTDDNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRLKG----IVPLAK 411
V L+D++F+ + + S +LV F APWCGHCK++ PE+E+AA L G LA
Sbjct: 280 VYHLSDEDFDQFVKEHSS---VLVMFHAPWCGHCKKMKPEFESAAEVLHGEGDSSGVLAA 336
Query: 412 VDCTANTNTCNKYGVSGYPTLKIFRDGEEAGAYDGPRTADGIVSHLKKQAGP-------- 567
VD T N ++ ++ +PTLK F++GE+ A RT + ++ P
Sbjct: 337 VDATVNKALAERFHIAEFPTLKYFKNGEKY-AVPALRTKKSFIEWMRNPESPPPPDPAWE 395
Query: 568 ---ASVPLRTEEEFEKFISDKDASVVGFFKDL---FSEAHSEFLKAASNLRDNYRFAHTN 729
SV + + F + + K ++V F+ +A F AA +D+ + A
Sbjct: 396 EQQTSVLHLSGDNFRETLKRKKHALVMFYAPWCPHCKKAIPHFTAAADAFKDDRKIACAA 455
Query: 730 VESLVDKYDD--DGEGITLFRPLHLMN--KFEDK 819
++ + + D E + + H + KF +K
Sbjct: 456 IDCVKENNKDLCQQEAVKAYPTFHYYHYGKFVEK 489
Score = 66.2 bits (160), Expect = 5e-11
Identities = 42/128 (32%), Positives = 65/128 (50%), Gaps = 16/128 (12%)
Frame = +1
Query: 307 MLVEFFAPWCGHCKRLAPEYEAAATRLKGIVPLAKVDCTAN--TNTCNKYGVSGYPTLKI 480
+L+ F+APWC CKR+ P ++ AAT+L+G LA ++ + N +Y V GYPT+
Sbjct: 175 ILMMFYAPWCSVCKRIMPHFQKAATQLRGQFVLAGMNVYPSEFENIKEEYSVRGYPTICY 234
Query: 481 FRDGEEAGAYDG-PRTADGIVSHLKKQAGP-------------ASVPLRTEEEFEKFISD 618
F G YD TA+ IV LK P SV ++E+F++F+ +
Sbjct: 235 FEKGRFLFQYDSYGSTAEDIVEWLKNPQPPQPQVPETPWADEGGSVYHLSDEDFDQFVKE 294
Query: 619 KDASVVGF 642
+ +V F
Sbjct: 295 HSSVLVMF 302
Score = 63.2 bits (152), Expect = 4e-10
Identities = 37/109 (33%), Positives = 50/109 (45%), Gaps = 4/109 (3%)
Frame = +1
Query: 238 SDVLELTDDNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRLKGI--VPLAK 411
+ VL L+ DNF + A LV F+APWC HCK+ P + AAA K + A
Sbjct: 399 TSVLHLSGDNFRETLKRKKHA---LVMFYAPWCPHCKKAIPHFTAAADAFKDDRKIACAA 455
Query: 412 VDCTANTNT--CNKYGVSGYPTLKIFRDGEEAGAYDGPRTADGIVSHLK 552
+DC N C + V YPT + G+ YD T G S ++
Sbjct: 456 IDCVKENNKDLCQQEAVKAYPTFHYYHYGKFVEKYDTNPTELGFTSFIR 504
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 33,486,937
Number of extensions: 765558
Number of successful extensions: 2567
Number of sequences better than 1.0e-05: 23
Number of HSP's gapped: 2530
Number of HSP's successfully gapped: 44
Length of query: 374
Length of database: 17,681,374
Length adjustment: 104
Effective length of query: 270
Effective length of database: 14,240,222
Effective search space: 3844859940
Effective search space used: 3844859940
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-001481
(1122 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_535453.2| PREDICTED: similar to protein disulfide isomera... 551 e-167
Alignment gi|XP_848238.1| PREDICTED: similar to Protein disulfide-isomera... 153 3e-37
Alignment gi|XP_539831.2| PREDICTED: similar to Protein disulfide-isomera... 147 2e-35
Alignment gi|XP_540488.2| PREDICTED: similar to prolyl 4-hydroxylase, bet... 138 1e-32
Alignment gi|XP_532876.2| PREDICTED: similar to Protein disulfide-isomera... 110 3e-24
Alignment gi|XP_533381.2| PREDICTED: similar to thioredoxin domain contai... 85 1e-16
Alignment gi|XP_535765.2| PREDICTED: similar to Protein disulfide-isomera... 79 8e-15
Alignment gi|XP_535988.2| PREDICTED: similar to DnaJ (Hsp40) homolog, sub... 73 6e-13
Alignment gi|XP_862766.1| PREDICTED: similar to DnaJ (Hsp40) homolog, sub... 73 6e-13
Alignment gi|XP_862743.1| PREDICTED: similar to DnaJ (Hsp40) homolog, sub... 73 6e-13
>ref|XP_535453.2| PREDICTED: similar to protein disulfide isomerase-associated 3
precursor [Canis familiaris].
Length = 687
Score = 551 bits (1419), Expect(3) = e-167
Identities = 274/297 (92%), Positives = 277/297 (93%)
Frame = +1
Query: 157 LVAMRLCRLALFPGVXXXXXXXXXXXXSDVLELTDDNFESRISDTGSAGLMLVEFFAPWC 336
LVAMR AL PGV SDVLELTDDNFESRISDTGSAGLMLVEFFAPWC
Sbjct: 180 LVAMRPRCRALLPGVALLFAAAGLASASDVLELTDDNFESRISDTGSAGLMLVEFFAPWC 239
Query: 337 GHCKRLAPEYEAAATRLKGIVPLAKVDCTANTNTCNKYGVSGYPTLKIFRDGEEAGAYDG 516
GHCKRLAPEYEAAATRLKGIVPLAKVDCTANTNTCNKYGVSGYPTLKIFRDGEEAGAYDG
Sbjct: 240 GHCKRLAPEYEAAATRLKGIVPLAKVDCTANTNTCNKYGVSGYPTLKIFRDGEEAGAYDG 299
Query: 517 PRTADGIVSHLKKQAGPASVPLRTEEEFEKFISDKDASVVGFFKDLFSEAHSEFLKAASN 696
PRTADGIVSHLKKQAGPASVPLRTEEEFEKFISDKDASVVGFF+DLFSEAHSEFLKAASN
Sbjct: 300 PRTADGIVSHLKKQAGPASVPLRTEEEFEKFISDKDASVVGFFQDLFSEAHSEFLKAASN 359
Query: 697 LRDNYRFAHTNVESLVDKYDDDGEGITLFRPLHLMNKFEDKTVAYTEPKMTSGKIKKFIQ 876
LRDNYRFAHTNVESLV+KYDDDGEGITLFRP HLMNKFEDKTVAY E KMTSGKIKKFIQ
Sbjct: 360 LRDNYRFAHTNVESLVNKYDDDGEGITLFRPSHLMNKFEDKTVAYIEQKMTSGKIKKFIQ 419
Query: 877 ENIFGICPHMTEDNKDLIQGKDLLLAYYDVDYEKNAKGSNYWRNRVMMVAKKFLDAG 1047
ENIFGICPHMTEDNKDLIQGKDLL+AYYDVDYEKNAKGSNYWRNRVMMVAKKFLDAG
Sbjct: 420 ENIFGICPHMTEDNKDLIQGKDLLVAYYDVDYEKNAKGSNYWRNRVMMVAKKFLDAG 476
Score = 53.1 bits (126), Expect(3) = e-167
Identities = 26/34 (76%), Positives = 27/34 (79%)
Frame = +3
Query: 18 AGLGGWDLRLQVRLGQTRELRQRVSGRRHGLRSP 119
AGLGGWDLRLQVRLGQTRE R RV GR +SP
Sbjct: 134 AGLGGWDLRLQVRLGQTRERRLRVRGRGRPSQSP 167
Score = 25.4 bits (54), Expect(3) = e-167
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +3
Query: 1050 ELNFAVASRKTF 1085
+LNFAVASRKTF
Sbjct: 478 KLNFAVASRKTF 489
Score = 68.2 bits (165), Expect = 1e-11
Identities = 39/119 (32%), Positives = 69/119 (57%), Gaps = 4/119 (3%)
Frame = +1
Query: 262 DNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRLK--GIVPLAKVDCTANTN 435
+NF+ ++D +L+EF+APWCGHCK L P+Y+ +L+ + +AK+D TAN +
Sbjct: 566 ENFDEIVNDENKD--VLIEFYAPWCGHCKNLEPKYKELGEKLRKDPNIIIAKMDATAN-D 622
Query: 436 TCNKYGVSGYPTLKIFRDGEEAG--AYDGPRTADGIVSHLKKQAGPASVPLRTEEEFEK 606
+ Y V G+PT+ ++ Y+G R +S+L+++A + P+ EE+ +K
Sbjct: 623 VPSPYEVRGFPTIYFSPANKKLNPKKYEGGRELSDFISYLQREA--TNPPVIQEEKAKK 679
>ref|XP_848238.1| PREDICTED: similar to Protein disulfide-isomerase A4 precursor
(Protein ERp-72) (ERp72) isoform 3 [Canis familiaris].
Length = 643
Score = 153 bits (386), Expect = 3e-37
Identities = 92/271 (33%), Positives = 150/271 (55%), Gaps = 8/271 (2%)
Frame = +1
Query: 247 LELTDDNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRL---KGIVPLAKVD 417
L LT +NF+ ++ A ++LVEF+APWCGHCK+LAPEYE AA L +PLAKVD
Sbjct: 177 LVLTKENFDDVVN---GADIILVEFYAPWCGHCKKLAPEYEKAAKELSKRSPPIPLAKVD 233
Query: 418 CTANTNTCNKYGVSGYPTLKIFRDGEEAGAYDGPRTADGIVSHLKKQAGPASVPLRTEEE 597
TA T+ ++ VS YPTLKIFR G+ Y+GPR GIV ++ +Q+GP S + ++
Sbjct: 234 ATAETDLAKRFEVSSYPTLKIFRKGKPFD-YNGPREKYGIVDYMIEQSGPPSKEIMALKQ 292
Query: 598 FEKFISD-KDASVVGFFKDLFSEAHSEFLKAASNLRDNYRFAHTNVESLVDKYDDDGEGI 774
++F+ D D ++G FK A+ ++ AA+NLR++Y+F HT + +
Sbjct: 293 VQEFLKDGDDVIIIGVFKAESDPAYQQYQDAANNLREDYKFHHTFSTEIAKFLKVSSGKL 352
Query: 775 TLFRPLHLMNKFEDKT-VAYTEPKMTSGKIKKFIQENIFGICPHMTEDNKDLIQGKDLLL 951
+ +P +K+E ++ V + + ++ +IQ ++ H+ + D Q + +
Sbjct: 353 VVMQPEKFQSKYEPRSNVLDIQDARAASRVVAWIQFHVLPAQGHLPMSHPDGPQPRVKSM 412
Query: 952 AYYDVDYEKNAKG---SNYWRNRVMMVAKKF 1035
+ + G + +WRN+V+ VAK F
Sbjct: 413 VFTSHLLLCSLGGQLTTQFWRNKVLEVAKDF 443
Score = 107 bits (268), Expect = 2e-23
Identities = 63/164 (38%), Positives = 96/164 (58%), Gaps = 12/164 (7%)
Frame = +1
Query: 244 VLELTDDNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRLK---GIVPLAKV 414
VL L D NF++ ++D + +L+EF+APWCGHCK+ APEYE A+ LK +P+AK+
Sbjct: 61 VLVLNDINFDNFVADKDT---VLLEFYAPWCGHCKQFAPEYEKIASTLKENDPPIPVAKI 117
Query: 415 DCTANTNTCNKYGVSGYPTLKIFRDGEEAGAYDGPRTADGIVSHLKKQAGPASVP----- 579
D T+ + ++GVSGYPT+KI + G EA Y+G RT + IV+ +K+ + P P
Sbjct: 118 DATSESALAGRFGVSGYPTIKILKKG-EAVDYEGSRTQEEIVAKVKEVSQPNWTPPPEVT 176
Query: 580 -LRTEEEFEKFISDKDASVVGFFKDLFSEAHS---EFLKAASNL 699
+ T+E F+ ++ D +V F+ E+ KAA L
Sbjct: 177 LVLTKENFDDVVNGADIILVEFYAPWCGHCKKLAPEYEKAAKEL 220
Score = 70.5 bits (171), Expect = 3e-12
Identities = 39/102 (38%), Positives = 58/102 (56%), Gaps = 5/102 (4%)
Frame = +1
Query: 307 MLVEFFAPWCGHCKRLAPEYEAAATRLKG--IVPLAKVDCTANTNTCNKYGVSGYPTLKI 480
+L+EF+APWCGHCK+L PEY A + K + +AK+D TAN T ++Y V G+PT+
Sbjct: 544 VLIEFYAPWCGHCKQLEPEYAALGKKYKNRKNLVIAKMDATANDITSDRYRVDGFPTIYF 603
Query: 481 FRDGEEAGAY---DGPRTADGIVSHLKKQAGPASVPLRTEEE 597
G++ DG R + + +++ A S RT EE
Sbjct: 604 APRGDKKNPIKFEDGNRDLEHLSKFVEEHATKLS---RTREE 642
>ref|XP_539831.2| PREDICTED: similar to Protein disulfide-isomerase A4 precursor
(Protein ERp-72) (ERp72) isoform 1 [Canis familiaris].
Length = 628
Score = 147 bits (370), Expect = 2e-35
Identities = 91/267 (34%), Positives = 146/267 (54%), Gaps = 4/267 (1%)
Frame = +1
Query: 247 LELTDDNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRL---KGIVPLAKVD 417
L LT +NF+ ++ A ++LVEF+APWCGHCK+LAPEYE AA L +PLAKVD
Sbjct: 177 LVLTKENFDDVVN---GADIILVEFYAPWCGHCKKLAPEYEKAAKELSKRSPPIPLAKVD 233
Query: 418 CTANTNTCNKYGVSGYPTLKIFRDGEEAGAYDGPRTADGIVSHLKKQAGPASVPLRTEEE 597
TA T+ ++ VS YPTLKIFR G+ Y+GPR GIV ++ +Q+GP S + ++
Sbjct: 234 ATAETDLAKRFEVSSYPTLKIFRKGKPFD-YNGPREKYGIVDYMIEQSGPPSKEIMALKQ 292
Query: 598 FEKFISD-KDASVVGFFKDLFSEAHSEFLKAASNLRDNYRFAHTNVESLVDKYDDDGEGI 774
++F+ D D ++G FK A+ ++ AA+NLR++Y+F HT + +
Sbjct: 293 VQEFLKDGDDVIIIGVFKAESDPAYQQYQDAANNLREDYKFHHTFSTEIAKFLKVSSGKL 352
Query: 775 TLFRPLHLMNKFEDKTVAYTEPKMTSGKIKKFIQENIFGICPHMTEDNKDLIQGKDLLLA 954
+ +P +K+E ++ + +++ G +Q G+ P + + G +
Sbjct: 353 VVMQPEKFQSKYEPRS-NVLDIQVSEGPRAVGLQ----GVRPALP------LTGHRSCIN 401
Query: 955 YYDVDYEKNAKGSNYWRNRVMMVAKKF 1035
+ A + +WRN+V+ VAK F
Sbjct: 402 GARPAPPRPASATQFWRNKVLEVAKDF 428
Score = 107 bits (268), Expect = 2e-23
Identities = 63/164 (38%), Positives = 96/164 (58%), Gaps = 12/164 (7%)
Frame = +1
Query: 244 VLELTDDNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRLK---GIVPLAKV 414
VL L D NF++ ++D + +L+EF+APWCGHCK+ APEYE A+ LK +P+AK+
Sbjct: 61 VLVLNDINFDNFVADKDT---VLLEFYAPWCGHCKQFAPEYEKIASTLKENDPPIPVAKI 117
Query: 415 DCTANTNTCNKYGVSGYPTLKIFRDGEEAGAYDGPRTADGIVSHLKKQAGPASVP----- 579
D T+ + ++GVSGYPT+KI + G EA Y+G RT + IV+ +K+ + P P
Sbjct: 118 DATSESALAGRFGVSGYPTIKILKKG-EAVDYEGSRTQEEIVAKVKEVSQPNWTPPPEVT 176
Query: 580 -LRTEEEFEKFISDKDASVVGFFKDLFSEAHS---EFLKAASNL 699
+ T+E F+ ++ D +V F+ E+ KAA L
Sbjct: 177 LVLTKENFDDVVNGADIILVEFYAPWCGHCKKLAPEYEKAAKEL 220
Score = 70.5 bits (171), Expect = 3e-12
Identities = 39/102 (38%), Positives = 58/102 (56%), Gaps = 5/102 (4%)
Frame = +1
Query: 307 MLVEFFAPWCGHCKRLAPEYEAAATRLKG--IVPLAKVDCTANTNTCNKYGVSGYPTLKI 480
+L+EF+APWCGHCK+L PEY A + K + +AK+D TAN T ++Y V G+PT+
Sbjct: 529 VLIEFYAPWCGHCKQLEPEYAALGKKYKNRKNLVIAKMDATANDITSDRYRVDGFPTIYF 588
Query: 481 FRDGEEAGAY---DGPRTADGIVSHLKKQAGPASVPLRTEEE 597
G++ DG R + + +++ A S RT EE
Sbjct: 589 APRGDKKNPIKFEDGNRDLEHLSKFVEEHATKLS---RTREE 627
>ref|XP_540488.2| PREDICTED: similar to prolyl 4-hydroxylase, beta subunit [Canis
familiaris].
Length = 510
Score = 138 bits (347), Expect = 1e-32
Identities = 87/239 (36%), Positives = 130/239 (54%), Gaps = 5/239 (2%)
Frame = +1
Query: 244 VLELTDDNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRLK---GIVPLAKV 414
VL L NFE ++ + +LVEF+APWCGHCK LAPEY AA LK + LAKV
Sbjct: 28 VLVLHKGNFEEALA---AHKYLLVEFYAPWCGHCKALAPEYAKAAGTLKAEGSEIRLAKV 84
Query: 415 DCTANTNTCNKYGVSGYPTLKIFRDGEEAG--AYDGPRTADGIVSHLKKQAGPASVPLRT 588
D T ++ ++YGV GYPT+K F++G+ A Y R A+ IV+ LKK+ GPA+ L
Sbjct: 85 DATEESDLAHQYGVRGYPTIKFFKNGDTAAPREYTAGREAEDIVNWLKKRTGPAATTLPD 144
Query: 589 EEEFEKFISDKDASVVGFFKDLFSEAHSEFLKAASNLRDNYRFAHTNVESLVDKYDDDGE 768
E + + +V+GFFKD+ S+ +FL AA + D+ F T+ + KY +
Sbjct: 145 GAAAEALLESSEVTVIGFFKDVESDFAKQFLLAAEAI-DDIPFGITSNSDVFSKYQLSKD 203
Query: 769 GITLFRPLHLMNKFEDKTVAYTEPKMTSGKIKKFIQENIFGICPHMTEDNKDLIQGKDL 945
G+ LF+ KF++ + E +++ K+ FI+ N + TE I G ++
Sbjct: 204 GVVLFK------KFDEGRNNF-EGEISKEKLLDFIKHNQLPLVIEFTEQTAPKIFGGEI 255
Score = 60.8 bits (146), Expect = 2e-09
Identities = 40/104 (38%), Positives = 52/104 (50%), Gaps = 4/104 (3%)
Frame = +1
Query: 253 LTDDNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRLKG--IVPLAKVDCTA 426
L NFE D + VEF+APWCGHCK+LAP ++ K + +AK+D TA
Sbjct: 374 LVGKNFEEVAFDEKKN--VFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMDSTA 431
Query: 427 NTNTCNKYGVSGYPTLKIFRDGEEAGA--YDGPRTADGIVSHLK 552
N K V +PTLK F + Y+G RT DG L+
Sbjct: 432 NEVEAVK--VHSFPTLKFFPASADRTVIDYNGERTLDGFKKFLE 473
>ref|XP_532876.2| PREDICTED: similar to Protein disulfide-isomerase A6 precursor
(Thioredoxin domain containing protein 7) [Canis
familiaris].
Length = 440
Score = 110 bits (274), Expect = 3e-24
Identities = 64/170 (37%), Positives = 92/170 (54%), Gaps = 12/170 (7%)
Frame = +1
Query: 241 DVLELTDDNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRLK----GIVPLA 408
DV+ELTDD+F+ + D S + +VEF+APWCGHCK L PE+ AAAT +K G V LA
Sbjct: 161 DVIELTDDSFDKNVLD--SDDVWMVEFYAPWCGHCKNLEPEWAAAATEVKEQTKGKVKLA 218
Query: 409 KVDCTANTNTCNKYGVSGYPTLKIFRDGEEAGAYDGPRTADGIVSH----LKKQAGPASV 576
VD T N ++YG+ G+PT+KIF+ GE Y+G RT IVS + A P +
Sbjct: 219 AVDATVNQLLASRYGIRGFPTIKIFQKGESPMEYEGGRTRSDIVSRALDLFSENAPPPEL 278
Query: 577 PLRTEEEFEKFISDKD----ASVVGFFKDLFSEAHSEFLKAASNLRDNYR 714
E+ K ++ +V+ D + + +L+ L D Y+
Sbjct: 279 LEIINEDIAKKTCEEHQLCVVAVLPHILDTGAAGRNSYLEVLLKLADKYK 328
Score = 92.0 bits (227), Expect = 9e-19
Identities = 46/101 (45%), Positives = 61/101 (60%), Gaps = 1/101 (0%)
Frame = +1
Query: 241 DVLELTDDNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRLKGIVPLAKVDC 420
DV+ELT NF + S L LVEF+APWCGHC+RL PE++ AT LK +V + VD
Sbjct: 26 DVIELTPSNFNREVIQ--SDNLWLVEFYAPWCGHCQRLTPEWKKVATALKDVVKVGAVDA 83
Query: 421 TANTNTCNKYGVSGYPTLKIFRDGEEAGA-YDGPRTADGIV 540
+ + +YGV G+PT+KIF + Y G RT + IV
Sbjct: 84 DKHQSLGGQYGVQGFPTIKIFGSNKNRPEDYQGSRTGEAIV 124
>ref|XP_533381.2| PREDICTED: similar to thioredoxin domain containing 10 [Canis
familiaris].
Length = 524
Score = 84.7 bits (208), Expect = 1e-16
Identities = 41/109 (37%), Positives = 65/109 (59%), Gaps = 3/109 (2%)
Frame = +1
Query: 286 DTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRLKGI---VPLAKVDCTANTNTCNKYGV 456
D + LV+F+APWCGHCK+L P + +K I V + K+D T+ ++ +++GV
Sbjct: 108 DNRKDDIWLVDFYAPWCGHCKKLEPIWNEVGLEMKSIGSPVKVGKMDATSYSSIASEFGV 167
Query: 457 SGYPTLKIFRDGEEAGAYDGPRTADGIVSHLKKQAGPASVPLRTEEEFE 603
GYPT+K+ + G+ A Y GPRT D I+ + +G PL +++ FE
Sbjct: 168 RGYPTIKLLK-GDLAYNYRGPRTKDDIIEFAHRVSGALIRPLPSQQMFE 215
>ref|XP_535765.2| PREDICTED: similar to Protein disulfide-isomerase A5 precursor
(Protein disulfide isomerase-related protein) [Canis
familiaris].
Length = 658
Score = 79.0 bits (193), Expect = 8e-15
Identities = 64/226 (28%), Positives = 102/226 (45%), Gaps = 22/226 (9%)
Frame = +1
Query: 244 VLELTDDNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRLKGIVP----LAK 411
V LTD++F+ + + S +LV F APWCGHCK++ PE+E AA L G LA
Sbjct: 417 VYHLTDEDFDQFVKEHSS---VLVMFHAPWCGHCKKMKPEFENAAEVLHGEADSSGVLAA 473
Query: 412 VDCTANTNTCNKYGVSGYPTLKIFRDGEEAGAYDGPRTADGIVSHLKK-QAGPASVPLRT 588
VD T N ++ +S +PTLK F++GE+ A RT + ++ +A P P
Sbjct: 474 VDATVNKALAERFHISEFPTLKYFKNGEKY-AVPALRTKKNFIEWMRNPEAPPPPEPTWE 532
Query: 589 EEE----------FEKFISDKDASVVGFFKDLFSEAHS---EFLKAASNLRDNYRFAHTN 729
E++ F + + K ++V F+ F A +D+ + A
Sbjct: 533 EQQTSVLHLAGDSFRETLKKKKHTLVMFYAPWCPHCKKVIPHFTATADVFKDDRKIACAA 592
Query: 730 VESLVDKYDD--DGEGITLFRPLHLMN--KFEDKTVAYTEPKMTSG 855
V+ + +K D E + + H + KF +K Y + SG
Sbjct: 593 VDCVKEKNQDLCQQEAVKAYPTFHYYHYGKFAEK---YDSDRTESG 635
Score = 68.9 bits (167), Expect = 8e-12
Identities = 43/128 (33%), Positives = 65/128 (50%), Gaps = 16/128 (12%)
Frame = +1
Query: 307 MLVEFFAPWCGHCKRLAPEYEAAATRLKGIVPLAKVDCTAN--TNTCNKYGVSGYPTLKI 480
+L+ F+APWC CKR+ P ++ AAT+L+G LA ++ + N +Y V GYPT+
Sbjct: 312 LLMMFYAPWCSMCKRIMPHFQKAATQLRGHFVLAGMNIYPSEFENVKEEYNVRGYPTICY 371
Query: 481 FRDGEEAGAYDG-PRTADGIVSHLKKQAGP-------------ASVPLRTEEEFEKFISD 618
F G YD TA+ IV LK P SV T+E+F++F+ +
Sbjct: 372 FEKGRFLFQYDNYGSTAEDIVEWLKNPQPPQPQVPETPWADEGGSVYHLTDEDFDQFVKE 431
Query: 619 KDASVVGF 642
+ +V F
Sbjct: 432 HSSVLVMF 439
Score = 65.5 bits (158), Expect = 9e-11
Identities = 37/109 (33%), Positives = 51/109 (46%), Gaps = 4/109 (3%)
Frame = +1
Query: 238 SDVLELTDDNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRLKGI--VPLAK 411
+ VL L D+F + LV F+APWC HCK++ P + A A K + A
Sbjct: 536 TSVLHLAGDSFRETLKKKKHT---LVMFYAPWCPHCKKVIPHFTATADVFKDDRKIACAA 592
Query: 412 VDCTA--NTNTCNKYGVSGYPTLKIFRDGEEAGAYDGPRTADGIVSHLK 552
VDC N + C + V YPT + G+ A YD RT G S ++
Sbjct: 593 VDCVKEKNQDLCQQEAVKAYPTFHYYHYGKFAEKYDSDRTESGFTSFIR 641
>ref|XP_535988.2| PREDICTED: similar to DnaJ (Hsp40) homolog, subfamily C, member 10
isoform 1 [Canis familiaris].
Length = 794
Score = 72.8 bits (177), Expect = 6e-13
Identities = 40/110 (36%), Positives = 54/110 (49%), Gaps = 8/110 (7%)
Frame = +1
Query: 247 LELTDDNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRLKGIVPLAKVDCTA 426
++LT F ++ +V+F+APWCG C+ APE+E A +KG V KVDC A
Sbjct: 674 IDLTPQTFNEKVLQ--GKNHWVVDFYAPWCGPCQNFAPEFELLARMIKGKVKAGKVDCQA 731
Query: 427 NTNTCNKYGVSGYPTLKIFRD--------GEEAGAYDGPRTADGIVSHLK 552
TC K G+ YPT+K + GE+ A D A I LK
Sbjct: 732 YGQTCQKAGIRAYPTVKFYPYERAKRNIWGEQIDARDAKEIATLIHEKLK 781
Score = 70.9 bits (172), Expect = 2e-12
Identities = 37/134 (27%), Positives = 61/134 (45%), Gaps = 7/134 (5%)
Frame = +1
Query: 241 DVLELTDDNFESRISDTGSAGL-------MLVEFFAPWCGHCKRLAPEYEAAATRLKGIV 399
D+L ++ S ++ G LV+FFAPWC C+ L PE A+ L G +
Sbjct: 443 DILAFAKESVNSHVTTLGPQNFPANDKEPWLVDFFAPWCPPCRALLPELRKASKHLYGQL 502
Query: 400 PLAKVDCTANTNTCNKYGVSGYPTLKIFRDGEEAGAYDGPRTADGIVSHLKKQAGPASVP 579
+DCT + CN Y + YPT +F Y+G +A+ I+ ++ P+ +
Sbjct: 503 KFGTLDCTIHEGLCNMYNIQAYPTTVVFNQ-SNVHEYEGHHSAEQILEFIEDLMNPSVIS 561
Query: 580 LRTEEEFEKFISDK 621
L T F + + +
Sbjct: 562 L-TPTTFNELVKQR 574
Score = 65.9 bits (159), Expect = 7e-11
Identities = 33/101 (32%), Positives = 54/101 (53%)
Frame = +1
Query: 241 DVLELTDDNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRLKGIVPLAKVDC 420
+++ L F++ ++ S L V F++P C HC LAP + A + G++ + V+C
Sbjct: 131 EIITLDRREFDAAVN---SGELWFVNFYSPGCSHCHDLAPTWRDFAKEVDGLLRIGAVNC 187
Query: 421 TANTNTCNKYGVSGYPTLKIFRDGEEAGAYDGPRTADGIVS 543
+ C GV+ YP+L IFR G A Y G R+ + +VS
Sbjct: 188 GDDRMLCRMKGVNSYPSLFIFRSGMAAVKYHGDRSKESLVS 228
Score = 54.3 bits (129), Expect = 2e-07
Identities = 22/80 (27%), Positives = 41/80 (51%)
Frame = +1
Query: 244 VLELTDDNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRLKGIVPLAKVDCT 423
V+ LT F + + +V+F++PWC C+ L PE++ A L G++ + +DC
Sbjct: 559 VISLTPTTFNELVKQRKHDEVWMVDFYSPWCHPCQVLMPEWKRMARTLTGLINVGSIDCQ 618
Query: 424 ANTNTCNKYGVSGYPTLKIF 483
+ C + V YP ++ +
Sbjct: 619 QYHSFCAQENVRRYPEIRFY 638
>ref|XP_862766.1| PREDICTED: similar to DnaJ (Hsp40) homolog, subfamily C, member 10
isoform 6 [Canis familiaris].
Length = 748
Score = 72.8 bits (177), Expect = 6e-13
Identities = 40/110 (36%), Positives = 54/110 (49%), Gaps = 8/110 (7%)
Frame = +1
Query: 247 LELTDDNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRLKGIVPLAKVDCTA 426
++LT F ++ +V+F+APWCG C+ APE+E A +KG V KVDC A
Sbjct: 628 IDLTPQTFNEKVLQ--GKNHWVVDFYAPWCGPCQNFAPEFELLARMIKGKVKAGKVDCQA 685
Query: 427 NTNTCNKYGVSGYPTLKIFRD--------GEEAGAYDGPRTADGIVSHLK 552
TC K G+ YPT+K + GE+ A D A I LK
Sbjct: 686 YGQTCQKAGIRAYPTVKFYPYERAKRNIWGEQIDARDAKEIATLIHEKLK 735
Score = 70.9 bits (172), Expect = 2e-12
Identities = 37/134 (27%), Positives = 61/134 (45%), Gaps = 7/134 (5%)
Frame = +1
Query: 241 DVLELTDDNFESRISDTGSAGL-------MLVEFFAPWCGHCKRLAPEYEAAATRLKGIV 399
D+L ++ S ++ G LV+FFAPWC C+ L PE A+ L G +
Sbjct: 397 DILAFAKESVNSHVTTLGPQNFPANDKEPWLVDFFAPWCPPCRALLPELRKASKHLYGQL 456
Query: 400 PLAKVDCTANTNTCNKYGVSGYPTLKIFRDGEEAGAYDGPRTADGIVSHLKKQAGPASVP 579
+DCT + CN Y + YPT +F Y+G +A+ I+ ++ P+ +
Sbjct: 457 KFGTLDCTIHEGLCNMYNIQAYPTTVVFNQ-SNVHEYEGHHSAEQILEFIEDLMNPSVIS 515
Query: 580 LRTEEEFEKFISDK 621
L T F + + +
Sbjct: 516 L-TPTTFNELVKQR 528
Score = 65.9 bits (159), Expect = 7e-11
Identities = 33/101 (32%), Positives = 54/101 (53%)
Frame = +1
Query: 241 DVLELTDDNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRLKGIVPLAKVDC 420
+++ L F++ ++ S L V F++P C HC LAP + A + G++ + V+C
Sbjct: 131 EIITLDRREFDAAVN---SGELWFVNFYSPGCSHCHDLAPTWRDFAKEVDGLLRIGAVNC 187
Query: 421 TANTNTCNKYGVSGYPTLKIFRDGEEAGAYDGPRTADGIVS 543
+ C GV+ YP+L IFR G A Y G R+ + +VS
Sbjct: 188 GDDRMLCRMKGVNSYPSLFIFRSGMAAVKYHGDRSKESLVS 228
Score = 54.3 bits (129), Expect = 2e-07
Identities = 22/80 (27%), Positives = 41/80 (51%)
Frame = +1
Query: 244 VLELTDDNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRLKGIVPLAKVDCT 423
V+ LT F + + +V+F++PWC C+ L PE++ A L G++ + +DC
Sbjct: 513 VISLTPTTFNELVKQRKHDEVWMVDFYSPWCHPCQVLMPEWKRMARTLTGLINVGSIDCQ 572
Query: 424 ANTNTCNKYGVSGYPTLKIF 483
+ C + V YP ++ +
Sbjct: 573 QYHSFCAQENVRRYPEIRFY 592
>ref|XP_862743.1| PREDICTED: similar to DnaJ (Hsp40) homolog, subfamily C, member 10
isoform 5 [Canis familiaris].
Length = 525
Score = 72.8 bits (177), Expect = 6e-13
Identities = 40/110 (36%), Positives = 54/110 (49%), Gaps = 8/110 (7%)
Frame = +1
Query: 247 LELTDDNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRLKGIVPLAKVDCTA 426
++LT F ++ +V+F+APWCG C+ APE+E A +KG V KVDC A
Sbjct: 405 IDLTPQTFNEKVLQ--GKNHWVVDFYAPWCGPCQNFAPEFELLARMIKGKVKAGKVDCQA 462
Query: 427 NTNTCNKYGVSGYPTLKIFRD--------GEEAGAYDGPRTADGIVSHLK 552
TC K G+ YPT+K + GE+ A D A I LK
Sbjct: 463 YGQTCQKAGIRAYPTVKFYPYERAKRNIWGEQIDARDAKEIATLIHEKLK 512
Score = 54.3 bits (129), Expect = 2e-07
Identities = 22/80 (27%), Positives = 41/80 (51%)
Frame = +1
Query: 244 VLELTDDNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRLKGIVPLAKVDCT 423
V+ LT F + + +V+F++PWC C+ L PE++ A L G++ + +DC
Sbjct: 290 VISLTPTTFNELVKQRKHDEVWMVDFYSPWCHPCQVLMPEWKRMARTLTGLINVGSIDCQ 349
Query: 424 ANTNTCNKYGVSGYPTLKIF 483
+ C + V YP ++ +
Sbjct: 350 QYHSFCAQENVRRYPEIRFY 369
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 34,955,676
Number of extensions: 785668
Number of successful extensions: 2437
Number of sequences better than 1.0e-05: 18
Number of HSP's gapped: 2411
Number of HSP's successfully gapped: 42
Length of query: 374
Length of database: 18,874,504
Length adjustment: 104
Effective length of query: 270
Effective length of database: 15,407,560
Effective search space: 4160041200
Effective search space used: 4160041200
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-001481
(1122 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_005304.3| protein disulfide-isomerase A3 precursor [Homo ... 546 e-156
Alignment gi|NP_004902.1| protein disulfide-isomerase A4 precursor [Homo ... 168 1e-41
Alignment gi|NP_000909.2| protein disulfide-isomerase precursor [Homo sap... 145 9e-35
Alignment gi|NP_006840.2| protein disulfide-isomerase A2 precursor [Homo ... 117 1e-26
Alignment gi|NP_005733.1| protein disulfide-isomerase A6 precursor [Homo ... 109 5e-24
Alignment gi|NP_001139021.1| thioredoxin domain-containing protein 5 isof... 97 4e-20
Alignment gi|NP_110437.2| thioredoxin domain-containing protein 5 isoform... 97 4e-20
Alignment gi|NP_061895.3| protein disulfide-isomerase TMX3 precursor [Hom... 87 3e-17
Alignment gi|NP_006801.1| protein disulfide-isomerase A5 precursor [Homo ... 78 2e-14
Alignment gi|NP_061854.1| dnaJ homolog subfamily C member 10 precursor [H... 72 9e-13
>ref|NP_005304.3| protein disulfide-isomerase A3 precursor [Homo sapiens].
Length = 505
Score = 546 bits (1407), Expect(2) = e-156
Identities = 269/294 (91%), Positives = 275/294 (93%)
Frame = +1
Query: 166 MRLCRLALFPGVXXXXXXXXXXXXSDVLELTDDNFESRISDTGSAGLMLVEFFAPWCGHC 345
MRL RLALFPGV SDVLELTDDNFESRISDTGSAGLMLVEFFAPWCGHC
Sbjct: 1 MRLRRLALFPGVALLLAAARLAAASDVLELTDDNFESRISDTGSAGLMLVEFFAPWCGHC 60
Query: 346 KRLAPEYEAAATRLKGIVPLAKVDCTANTNTCNKYGVSGYPTLKIFRDGEEAGAYDGPRT 525
KRLAPEYEAAATRLKGIVPLAKVDCTANTNTCNKYGVSGYPTLKIFRDGEEAGAYDGPRT
Sbjct: 61 KRLAPEYEAAATRLKGIVPLAKVDCTANTNTCNKYGVSGYPTLKIFRDGEEAGAYDGPRT 120
Query: 526 ADGIVSHLKKQAGPASVPLRTEEEFEKFISDKDASVVGFFKDLFSEAHSEFLKAASNLRD 705
ADGIVSHLKKQAGPASVPLRTEEEF+KFISDKDAS+VGFF D FSEAHSEFLKAASNLRD
Sbjct: 121 ADGIVSHLKKQAGPASVPLRTEEEFKKFISDKDASIVGFFDDSFSEAHSEFLKAASNLRD 180
Query: 706 NYRFAHTNVESLVDKYDDDGEGITLFRPLHLMNKFEDKTVAYTEPKMTSGKIKKFIQENI 885
NYRFAHTNVESLV++YDD+GEGI LFRP HL NKFEDKTVAYTE KMTSGKIKKFIQENI
Sbjct: 181 NYRFAHTNVESLVNEYDDNGEGIILFRPSHLTNKFEDKTVAYTEQKMTSGKIKKFIQENI 240
Query: 886 FGICPHMTEDNKDLIQGKDLLLAYYDVDYEKNAKGSNYWRNRVMMVAKKFLDAG 1047
FGICPHMTEDNKDLIQGKDLL+AYYDVDYEKNAKGSNYWRNRVMMVAKKFLDAG
Sbjct: 241 FGICPHMTEDNKDLIQGKDLLIAYYDVDYEKNAKGSNYWRNRVMMVAKKFLDAG 294
Score = 25.4 bits (54), Expect(2) = e-156
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +3
Query: 1050 ELNFAVASRKTF 1085
+LNFAVASRKTF
Sbjct: 296 KLNFAVASRKTF 307
Score = 65.1 bits (157), Expect = 1e-10
Identities = 38/119 (31%), Positives = 68/119 (57%), Gaps = 4/119 (3%)
Frame = +1
Query: 262 DNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRLK--GIVPLAKVDCTANTN 435
+NF+ +++ +L+EF+APWCGHCK L P+Y+ +L + +AK+D TAN +
Sbjct: 384 ENFDEIVNNENKD--VLIEFYAPWCGHCKNLEPKYKELGEKLSKDPNIVIAKMDATAN-D 440
Query: 436 TCNKYGVSGYPTLKIFRDGEEAG--AYDGPRTADGIVSHLKKQAGPASVPLRTEEEFEK 606
+ Y V G+PT+ ++ Y+G R +S+L+++A + P+ EE+ +K
Sbjct: 441 VPSPYEVRGFPTIYFSPANKKLNPKKYEGGRELSDFISYLQREA--TNPPVIQEEKPKK 497
>ref|NP_004902.1| protein disulfide-isomerase A4 precursor [Homo sapiens].
Length = 645
Score = 168 bits (425), Expect = 1e-41
Identities = 100/272 (36%), Positives = 162/272 (59%), Gaps = 9/272 (3%)
Frame = +1
Query: 247 LELTDDNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRL---KGIVPLAKVD 417
L LT +NF+ ++D A ++LVEF+APWCGHCK+LAPEYE AA L +PLAKVD
Sbjct: 180 LVLTKENFDEVVND---ADIILVEFYAPWCGHCKKLAPEYEKAAKELSKRSPPIPLAKVD 236
Query: 418 CTANTNTCNKYGVSGYPTLKIFRDGEEAGAYDGPRTADGIVSHLKKQAGPASVPLRTEEE 597
TA T+ ++ VSGYPTLKIFR G Y+GPR GIV ++ +Q+GP S + T ++
Sbjct: 237 ATAETDLAKRFDVSGYPTLKIFRKGRPYD-YNGPREKYGIVDYMIEQSGPPSKEILTLKQ 295
Query: 598 FEKFISD-KDASVVGFFKDLFSEAHSEFLKAASNLRDNYRFAHTNVESLVDKYDDDGEG- 771
++F+ D D ++G FK A+ ++ AA+NLR++Y+F HT + + K+ +G
Sbjct: 296 VQEFLKDGDDVIIIGVFKGESDPAYQQYQDAANNLREDYKFHHT-FSTEIAKFLKVSQGQ 354
Query: 772 ITLFRPLHLMNKFEDKT-VAYTEPKMTSGKIKKFIQENIFGICPH--MTEDNKDLIQGKD 942
+ + +P +K+E ++ + + IK F+ + + H ++ D K + +
Sbjct: 355 LVVMQPEKFQSKYEPRSHMMDVQGSTQDSAIKDFVLKYALPLVGHRKVSNDAKRYTR-RP 413
Query: 943 LLLAYYDVDYEKNAK-GSNYWRNRVMMVAKKF 1035
L++ YY VD+ + + + +WR++V+ VAK F
Sbjct: 414 LVVVYYSVDFSFDYRAATQFWRSKVLEVAKDF 445
Score = 105 bits (261), Expect = 1e-22
Identities = 61/164 (37%), Positives = 97/164 (59%), Gaps = 12/164 (7%)
Frame = +1
Query: 244 VLELTDDNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRLKG---IVPLAKV 414
VL L D NF++ ++D + +L+EF+APWCGHCK+ APEYE A LK +P+AK+
Sbjct: 64 VLVLNDANFDNFVADKDT---VLLEFYAPWCGHCKQFAPEYEKIANILKDKDPPIPVAKI 120
Query: 415 DCTANTNTCNKYGVSGYPTLKIFRDGEEAGAYDGPRTADGIVSHLKKQAGPASVP----- 579
D T+ + +++ VSGYPT+KI + G +A Y+G RT + IV+ +++ + P P
Sbjct: 121 DATSASVLASRFDVSGYPTIKILKKG-QAVDYEGSRTQEEIVAKVREVSQPDWTPPPEVT 179
Query: 580 -LRTEEEFEKFISDKDASVVGFFKDLFSEAHS---EFLKAASNL 699
+ T+E F++ ++D D +V F+ E+ KAA L
Sbjct: 180 LVLTKENFDEVVNDADIILVEFYAPWCGHCKKLAPEYEKAAKEL 223
Score = 68.2 bits (165), Expect = 1e-11
Identities = 39/102 (38%), Positives = 59/102 (57%), Gaps = 5/102 (4%)
Frame = +1
Query: 307 MLVEFFAPWCGHCKRLAPEYEAAATRLKGI--VPLAKVDCTANTNTCNKYGVSGYPTLKI 480
+L+EF+APWCGHCK+L P Y + A + KG + +AK+D TAN ++Y V G+PT+
Sbjct: 546 VLIEFYAPWCGHCKQLEPVYNSLAKKYKGQKGLVIAKMDATANDVPSDRYKVEGFPTIYF 605
Query: 481 FRDGEEAG--AYDGPRTADGIVSHLKKQAGPASVPL-RTEEE 597
G++ ++G D + HL K + L RT+EE
Sbjct: 606 APSGDKKNPVKFEG---GDRDLEHLSKFIEEHATKLSRTKEE 644
>ref|NP_000909.2| protein disulfide-isomerase precursor [Homo sapiens].
Length = 508
Score = 145 bits (365), Expect = 9e-35
Identities = 89/239 (37%), Positives = 131/239 (54%), Gaps = 5/239 (2%)
Frame = +1
Query: 244 VLELTDDNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRLKGI---VPLAKV 414
VL L NF ++ + +LVEF+APWCGHCK LAPEY AA +LK + LAKV
Sbjct: 26 VLVLRKSNFAEALA---AHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKV 82
Query: 415 DCTANTNTCNKYGVSGYPTLKIFRDGEEAGA--YDGPRTADGIVSHLKKQAGPASVPLRT 588
D T ++ +YGV GYPT+K FR+G+ A Y R AD IV+ LKK+ GPA+ L
Sbjct: 83 DATEESDLAQQYGVRGYPTIKFFRNGDTASPKEYTAGREADDIVNWLKKRTGPAATTLPD 142
Query: 589 EEEFEKFISDKDASVVGFFKDLFSEAHSEFLKAASNLRDNYRFAHTNVESLVDKYDDDGE 768
E + + +V+GFFKD+ S++ +FL+AA + D+ F T+ + KY D +
Sbjct: 143 GAAAESLVESSEVAVIGFFKDVESDSAKQFLQAAEAI-DDIPFGITSNSDVFSKYQLDKD 201
Query: 769 GITLFRPLHLMNKFEDKTVAYTEPKMTSGKIKKFIQENIFGICPHMTEDNKDLIQGKDL 945
G+ LF+ KF++ + E ++T + FI+ N + TE I G ++
Sbjct: 202 GVVLFK------KFDEGRNNF-EGEVTKENLLDFIKHNQLPLVIEFTEQTAPKIFGGEI 253
Score = 60.8 bits (146), Expect = 2e-09
Identities = 40/104 (38%), Positives = 52/104 (50%), Gaps = 4/104 (3%)
Frame = +1
Query: 253 LTDDNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRLKG--IVPLAKVDCTA 426
L NFE D + VEF+APWCGHCK+LAP ++ K + +AK+D TA
Sbjct: 372 LVGKNFEDVAFDEKKN--VFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMDSTA 429
Query: 427 NTNTCNKYGVSGYPTLKIFRDGEEAGA--YDGPRTADGIVSHLK 552
N K V +PTLK F + Y+G RT DG L+
Sbjct: 430 NEVEAVK--VHSFPTLKFFPASADRTVIDYNGERTLDGFKKFLE 471
>ref|NP_006840.2| protein disulfide-isomerase A2 precursor [Homo sapiens].
Length = 525
Score = 117 bits (294), Expect = 1e-26
Identities = 66/165 (40%), Positives = 93/165 (56%), Gaps = 5/165 (3%)
Frame = +1
Query: 307 MLVEFFAPWCGHCKRLAPEYEAAATRLKG---IVPLAKVDCTANTNTCNKYGVSGYPTLK 477
+LVEF+APWCGHC+ LAPEY AA L +V LAKVD A ++GV+ YPTLK
Sbjct: 62 LLVEFYAPWCGHCQALAPEYSKAAAVLAAESMVVTLAKVDGPAQRELAEEFGVTEYPTLK 121
Query: 478 IFRDGEEAGA--YDGPRTADGIVSHLKKQAGPASVPLRTEEEFEKFISDKDASVVGFFKD 651
FR+G Y GPR A+GI L+++ GP+++ L E + I +D V+GFF+D
Sbjct: 122 FFRNGNRTHPEEYTGPRDAEGIAEWLRRRVGPSAMRLEDEAAAQALIGGRDLVVIGFFQD 181
Query: 652 LFSEAHSEFLKAASNLRDNYRFAHTNVESLVDKYDDDGEGITLFR 786
L E + FL A + D F T+ L ++ + + LF+
Sbjct: 182 LQDEDVATFLALAQDALD-MTFGLTDRPRLFQQFGLTKDTVVLFK 225
Score = 57.4 bits (137), Expect = 2e-08
Identities = 30/83 (36%), Positives = 42/83 (50%)
Frame = +1
Query: 244 VLELTDDNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRLKGIVPLAKVDCT 423
V L NFE D + V+F+APWC HCK +AP +EA A + + + +
Sbjct: 390 VKTLVGKNFEQVAFDETKN--VFVKFYAPWCTHCKEMAPAWEALAEKYQDHEDIIIAELD 447
Query: 424 ANTNTCNKYGVSGYPTLKIFRDG 492
A N + + V G+PTLK F G
Sbjct: 448 ATANELDAFAVHGFPTLKYFPAG 470
>ref|NP_005733.1| protein disulfide-isomerase A6 precursor [Homo sapiens].
Length = 440
Score = 109 bits (272), Expect = 5e-24
Identities = 64/170 (37%), Positives = 91/170 (53%), Gaps = 12/170 (7%)
Frame = +1
Query: 241 DVLELTDDNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRLK----GIVPLA 408
DV+ELTDD+F+ + D S + +VEF+APWCGHCK L PE+ AAA+ +K G V LA
Sbjct: 161 DVIELTDDSFDKNVLD--SEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLA 218
Query: 409 KVDCTANTNTCNKYGVSGYPTLKIFRDGEEAGAYDGPRTADGIVSH----LKKQAGPASV 576
VD T N ++YG+ G+PT+KIF+ GE YDG RT IVS A P +
Sbjct: 219 AVDATVNQVLASRYGIRGFPTIKIFQKGESPVDYDGGRTRSDIVSRALDLFSDNAPPPEL 278
Query: 577 PLRTEEEFEKFISDKD----ASVVGFFKDLFSEAHSEFLKAASNLRDNYR 714
E+ K ++ +V+ D + + +L+ L D Y+
Sbjct: 279 LEIINEDIAKRTCEEHQLCVVAVLPHILDTGAAGRNSYLEVLLKLADKYK 328
Score = 93.6 bits (231), Expect = 3e-19
Identities = 47/101 (46%), Positives = 63/101 (62%), Gaps = 1/101 (0%)
Frame = +1
Query: 241 DVLELTDDNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRLKGIVPLAKVDC 420
DV+ELT NF + + S L LVEF+APWCGHC+RL PE++ AAT LK +V + VD
Sbjct: 26 DVIELTPSNFNREVIQSDS--LWLVEFYAPWCGHCQRLTPEWKKAATALKDVVKVGAVDA 83
Query: 421 TANTNTCNKYGVSGYPTLKIFRDGEEAGA-YDGPRTADGIV 540
+ + +YGV G+PT+KIF + Y G RT + IV
Sbjct: 84 DKHHSLGGQYGVQGFPTIKIFGSNKNRPEDYQGGRTGEAIV 124
>ref|NP_001139021.1| thioredoxin domain-containing protein 5 isoform 3 [Homo sapiens].
Length = 324
Score = 96.7 bits (239), Expect = 4e-20
Identities = 49/110 (44%), Positives = 69/110 (62%), Gaps = 4/110 (3%)
Frame = +1
Query: 244 VLELTDDNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATR----LKGIVPLAK 411
VL LT++NF+ DT + G+ ++F+APWCGHCK LAP +E + + L G V +A+
Sbjct: 216 VLALTENNFD----DTIAEGITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAG-VKIAE 270
Query: 412 VDCTANTNTCNKYGVSGYPTLKIFRDGEEAGAYDGPRTADGIVSHLKKQA 561
VDCTA N C+KY V GYPTL +FR G++ + G R D + + QA
Sbjct: 271 VDCTAERNICSKYSVRGYPTLLLFRGGKKVSEHSGGRDLDSLHRFVLSQA 320
Score = 83.6 bits (205), Expect = 3e-16
Identities = 48/131 (36%), Positives = 70/131 (53%), Gaps = 2/131 (1%)
Frame = +1
Query: 250 ELTDDNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRLKG--IVPLAKVDCT 423
EL+ NFE ++ G ++FFAPWCGHCK LAP +E A L+ V + KVDCT
Sbjct: 85 ELSASNFELHVAQ----GDHFIKFFAPWCGHCKALAPTWEQLALGLEHSETVKIGKVDCT 140
Query: 424 ANTNTCNKYGVSGYPTLKIFRDGEEAGAYDGPRTADGIVSHLKKQAGPASVPLRTEEEFE 603
+ C+ V GYPTL FRDG++ Y G R + + +++ Q RTE
Sbjct: 141 QHYELCSGNQVRGYPTLLWFRDGKKVDQYKGKRDLESLREYVESQL------QRTETGAT 194
Query: 604 KFISDKDASVV 636
+ ++ +A V+
Sbjct: 195 ETVTPSEAPVL 205
Score = 58.5 bits (140), Expect = 1e-08
Identities = 25/42 (59%), Positives = 33/42 (78%)
Frame = +1
Query: 397 VPLAKVDCTANTNTCNKYGVSGYPTLKIFRDGEEAGAYDGPR 522
V +AKVDCTA+++ C+ GV GYPTLK+F+ G+EA Y GPR
Sbjct: 6 VYVAKVDCTAHSDVCSAQGVRGYPTLKLFKPGQEAVKYQGPR 47
>ref|NP_110437.2| thioredoxin domain-containing protein 5 isoform 1 precursor [Homo
sapiens].
Length = 432
Score = 96.7 bits (239), Expect = 4e-20
Identities = 49/110 (44%), Positives = 69/110 (62%), Gaps = 4/110 (3%)
Frame = +1
Query: 244 VLELTDDNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATR----LKGIVPLAK 411
VL LT++NF+ DT + G+ ++F+APWCGHCK LAP +E + + L G V +A+
Sbjct: 324 VLALTENNFD----DTIAEGITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAG-VKIAE 378
Query: 412 VDCTANTNTCNKYGVSGYPTLKIFRDGEEAGAYDGPRTADGIVSHLKKQA 561
VDCTA N C+KY V GYPTL +FR G++ + G R D + + QA
Sbjct: 379 VDCTAERNICSKYSVRGYPTLLLFRGGKKVSEHSGGRDLDSLHRFVLSQA 428
Score = 84.7 bits (208), Expect = 1e-16
Identities = 38/74 (51%), Positives = 50/74 (67%), Gaps = 4/74 (5%)
Frame = +1
Query: 313 VEFFAPWCGHCKRLAPEYEAAATRLKGI----VPLAKVDCTANTNTCNKYGVSGYPTLKI 480
V FFAPWCGHC+RL P + + + V +AKVDCTA+++ C+ GV GYPTLK+
Sbjct: 82 VMFFAPWCGHCQRLQPTWNDLGDKYNSMEDAKVYVAKVDCTAHSDVCSAQGVRGYPTLKL 141
Query: 481 FRDGEEAGAYDGPR 522
F+ G+EA Y GPR
Sbjct: 142 FKPGQEAVKYQGPR 155
Score = 83.6 bits (205), Expect = 3e-16
Identities = 48/131 (36%), Positives = 70/131 (53%), Gaps = 2/131 (1%)
Frame = +1
Query: 250 ELTDDNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRLKG--IVPLAKVDCT 423
EL+ NFE ++ G ++FFAPWCGHCK LAP +E A L+ V + KVDCT
Sbjct: 193 ELSASNFELHVAQ----GDHFIKFFAPWCGHCKALAPTWEQLALGLEHSETVKIGKVDCT 248
Query: 424 ANTNTCNKYGVSGYPTLKIFRDGEEAGAYDGPRTADGIVSHLKKQAGPASVPLRTEEEFE 603
+ C+ V GYPTL FRDG++ Y G R + + +++ Q RTE
Sbjct: 249 QHYELCSGNQVRGYPTLLWFRDGKKVDQYKGKRDLESLREYVESQL------QRTETGAT 302
Query: 604 KFISDKDASVV 636
+ ++ +A V+
Sbjct: 303 ETVTPSEAPVL 313
>ref|NP_061895.3| protein disulfide-isomerase TMX3 precursor [Homo sapiens].
Length = 454
Score = 87.0 bits (214), Expect = 3e-17
Identities = 55/172 (31%), Positives = 92/172 (53%), Gaps = 3/172 (1%)
Frame = +1
Query: 247 LELTDDNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRLKGI---VPLAKVD 417
+E D++F+ +D + LV+F+APWCGHCK+L P + +K I V + K+D
Sbjct: 28 VEDLDESFKENRNDD----IWLVDFYAPWCGHCKKLEPIWNEVGLEMKSIGSPVKVGKMD 83
Query: 418 CTANTNTCNKYGVSGYPTLKIFRDGEEAGAYDGPRTADGIVSHLKKQAGPASVPLRTEEE 597
T+ ++ +++GV GYPT+K+ + G+ A Y GPRT D I+ + +G PL +++
Sbjct: 84 ATSYSSIASEFGVRGYPTIKLLK-GDLAYNYRGPRTKDDIIEFAHRVSGALIRPLPSQQM 142
Query: 598 FEKFISDKDASVVGFFKDLFSEAHSEFLKAASNLRDNYRFAHTNVESLVDKY 753
FE K V + S +++ AAS L Y + + E +V +Y
Sbjct: 143 FEHM--QKRHRVFFVYVGGESPLKEKYIDAASEL-IVYTYFFSASEEVVPEY 191
>ref|NP_006801.1| protein disulfide-isomerase A5 precursor [Homo sapiens].
Length = 519
Score = 77.8 bits (190), Expect = 2e-14
Identities = 57/190 (30%), Positives = 89/190 (46%), Gaps = 18/190 (9%)
Frame = +1
Query: 244 VLELTDDNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRLKGIVP----LAK 411
V LTD++F+ + + S +LV F APWCGHCK++ PE+E AA L G LA
Sbjct: 278 VYHLTDEDFDQFVKEHSS---VLVMFHAPWCGHCKKMKPEFEKAAEALHGEADSSGVLAA 334
Query: 412 VDCTANTNTCNKYGVSGYPTLKIFRDGEEAGAYDGPRTADGIVSHLKK-QAGPASVPLRT 588
VD T N ++ +S +PTLK F++GE+ A RT + ++ +A P P
Sbjct: 335 VDATVNKALAERFHISEFPTLKYFKNGEKY-AVPVLRTKKKFLEWMQNPEAPPPPEPTWE 393
Query: 589 EEE----------FEKFISDKDASVVGFFKDLFSEAHS---EFLKAASNLRDNYRFAHTN 729
E++ F + + K ++V F+ F A +D+ + A
Sbjct: 394 EQQTSVLHLVGDNFRETLKKKKHTLVMFYAPWCPHCKKVIPHFTATADAFKDDRKIACAA 453
Query: 730 VESLVDKYDD 759
V+ + DK D
Sbjct: 454 VDCVKDKNQD 463
Score = 69.3 bits (168), Expect = 6e-12
Identities = 48/150 (32%), Positives = 72/150 (48%), Gaps = 19/150 (12%)
Frame = +1
Query: 307 MLVEFFAPWCGHCKRLAPEYEAAATRLKGIVPLAKVDCTAN--TNTCNKYGVSGYPTLKI 480
+L+ F+APWC CKR+ P ++ AAT+L+G LA ++ ++ N +Y V G+PT+
Sbjct: 173 LLIMFYAPWCSMCKRMMPHFQKAATQLRGHAVLAGMNVYSSEFENIKEEYSVRGFPTICY 232
Query: 481 FRDGEEAGAYDG-PRTADGIVSHLKKQAGP-------------ASVPLRTEEEFEKFISD 618
F G YD TA+ IV LK P SV T+E+F++F+ +
Sbjct: 233 FEKGRFLFQYDNYGSTAEDIVEWLKNPQPPQPQVPETPWADEGGSVYHLTDEDFDQFVKE 292
Query: 619 KDASVVGFFKDLFSEAHS---EFLKAASNL 699
+ +V F EF KAA L
Sbjct: 293 HSSVLVMFHAPWCGHCKKMKPEFEKAAEAL 322
Score = 68.9 bits (167), Expect = 8e-12
Identities = 38/109 (34%), Positives = 53/109 (48%), Gaps = 4/109 (3%)
Frame = +1
Query: 238 SDVLELTDDNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRLKGI--VPLAK 411
+ VL L DNF + LV F+APWC HCK++ P + A A K + A
Sbjct: 397 TSVLHLVGDNFRETLKKKKHT---LVMFYAPWCPHCKKVIPHFTATADAFKDDRKIACAA 453
Query: 412 VDCTANTNT--CNKYGVSGYPTLKIFRDGEEAGAYDGPRTADGIVSHLK 552
VDC + N C + V GYPT + G+ A YD RT G ++++
Sbjct: 454 VDCVKDKNQDLCQQEAVKGYPTFHYYHYGKFAEKYDSDRTELGFTNYIR 502
>ref|NP_061854.1| dnaJ homolog subfamily C member 10 precursor [Homo sapiens].
Length = 793
Score = 72.0 bits (175), Expect = 9e-13
Identities = 31/78 (39%), Positives = 44/78 (56%)
Frame = +1
Query: 250 ELTDDNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRLKGIVPLAKVDCTAN 429
+LT F ++ +++F+APWCG C+ APE+E A +KG V KVDC A
Sbjct: 674 DLTPQTFSEKVLQ--GKNHWVIDFYAPWCGPCQNFAPEFELLARMIKGKVKAGKVDCQAY 731
Query: 430 TNTCNKYGVSGYPTLKIF 483
TC K G+ YPT+K +
Sbjct: 732 AQTCQKAGIRAYPTVKFY 749
Score = 71.2 bits (173), Expect = 2e-12
Identities = 38/134 (28%), Positives = 62/134 (46%), Gaps = 7/134 (5%)
Frame = +1
Query: 241 DVLELTDDNFESRISDTGSAGL-------MLVEFFAPWCGHCKRLAPEYEAAATRLKGIV 399
D+L ++ S ++ G LV+FFAPWC C+ L PE A+ L G +
Sbjct: 442 DILAFAKESVNSHVTTLGPQNFPANDKEPWLVDFFAPWCPPCRALLPELRRASNLLYGQL 501
Query: 400 PLAKVDCTANTNTCNKYGVSGYPTLKIFRDGEEAGAYDGPRTADGIVSHLKKQAGPASVP 579
+DCT + CN Y + YPT +F Y+G +A+ I+ ++ P+ V
Sbjct: 502 KFGTLDCTVHEGLCNMYNIQAYPTTVVFNQ-SNIHEYEGHHSAEQILEFIEDLMNPSVVS 560
Query: 580 LRTEEEFEKFISDK 621
L T F + ++ +
Sbjct: 561 L-TPTTFNELVTQR 573
Score = 63.9 bits (154), Expect = 3e-10
Identities = 32/101 (31%), Positives = 53/101 (52%)
Frame = +1
Query: 241 DVLELTDDNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRLKGIVPLAKVDC 420
+++ L F++ ++ S L V F++P C HC LAP + A + G++ + V+C
Sbjct: 130 EIITLERREFDAAVN---SGELWFVNFYSPGCSHCHDLAPTWRDFAKEVDGLLRIGAVNC 186
Query: 421 TANTNTCNKYGVSGYPTLKIFRDGEEAGAYDGPRTADGIVS 543
+ C GV+ YP+L IFR G Y G R+ + +VS
Sbjct: 187 GDDRMLCRMKGVNSYPSLFIFRSGMAPVKYHGDRSKESLVS 227
Score = 55.8 bits (133), Expect = 7e-08
Identities = 23/80 (28%), Positives = 42/80 (52%)
Frame = +1
Query: 244 VLELTDDNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRLKGIVPLAKVDCT 423
V+ LT F ++ + +V+F++PWC C+ L PE++ A L G++ + +DC
Sbjct: 558 VVSLTPTTFNELVTQRKHNEVWMVDFYSPWCHPCQVLMPEWKRMARTLTGLINVGSIDCQ 617
Query: 424 ANTNTCNKYGVSGYPTLKIF 483
+ C + V YP ++ F
Sbjct: 618 QYHSFCAQENVQRYPEIRFF 637
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 34,426,451
Number of extensions: 786663
Number of successful extensions: 2484
Number of sequences better than 1.0e-05: 20
Number of HSP's gapped: 2454
Number of HSP's successfully gapped: 36
Length of query: 374
Length of database: 18,297,164
Length adjustment: 104
Effective length of query: 270
Effective length of database: 14,868,908
Effective search space: 4014605160
Effective search space used: 4014605160
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-001481
(1122 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_031978.2| protein disulfide-isomerase A3 precursor [Mus m... 537 e-153
Alignment gi|NP_033917.2| protein disulfide-isomerase A4 [Mus musculus]. 166 2e-41
Alignment gi|NP_035162.1| protein disulfide-isomerase precursor [Mus musc... 149 5e-36
Alignment gi|NP_001074539.1| protein disulfide-isomerase A2 [Mus musculus]. 121 1e-27
Alignment gi|XP_001476035.1| PREDICTED: protein disulfide-isomerase A6-li... 110 2e-24
Alignment gi|XP_003085845.1| PREDICTED: protein disulfide-isomerase A6-li... 110 2e-24
Alignment gi|NP_082235.1| protein disulfide-isomerase A6 [Mus musculus]. 110 2e-24
Alignment gi|NP_663342.3| thioredoxin domain-containing protein 5 precurs... 103 3e-22
Alignment gi|NP_938037.2| protein disulfide-isomerase TMX3 precursor [Mus... 84 2e-16
Alignment gi|NP_082571.1| protein disulfide-isomerase A5 precursor [Mus m... 79 5e-15
>ref|NP_031978.2| protein disulfide-isomerase A3 precursor [Mus musculus].
Length = 505
Score = 537 bits (1383), Expect(2) = e-153
Identities = 261/294 (88%), Positives = 273/294 (92%)
Frame = +1
Query: 166 MRLCRLALFPGVXXXXXXXXXXXXSDVLELTDDNFESRISDTGSAGLMLVEFFAPWCGHC 345
MR LAL PGV SDVLELTD+NFESR+SDTGSAGLMLVEFFAPWCGHC
Sbjct: 1 MRFSCLALLPGVALLLASARLAAASDVLELTDENFESRVSDTGSAGLMLVEFFAPWCGHC 60
Query: 346 KRLAPEYEAAATRLKGIVPLAKVDCTANTNTCNKYGVSGYPTLKIFRDGEEAGAYDGPRT 525
KRLAPEYEAAATRLKGIVPLAKVDCTANTNTCNKYGVSGYPTLKIFRDGEEAGAYDGPRT
Sbjct: 61 KRLAPEYEAAATRLKGIVPLAKVDCTANTNTCNKYGVSGYPTLKIFRDGEEAGAYDGPRT 120
Query: 526 ADGIVSHLKKQAGPASVPLRTEEEFEKFISDKDASVVGFFKDLFSEAHSEFLKAASNLRD 705
ADGIVSHLKKQAGPASVPLRTEEEF+KFISDKDASVVGFF+DLFS+ HSEFLKAASNLRD
Sbjct: 121 ADGIVSHLKKQAGPASVPLRTEEEFKKFISDKDASVVGFFRDLFSDGHSEFLKAASNLRD 180
Query: 706 NYRFAHTNVESLVDKYDDDGEGITLFRPLHLMNKFEDKTVAYTEPKMTSGKIKKFIQENI 885
NYRFAHTN+ESLV +YDD+GEGIT+FRPLHL NKFEDKTVAYTE KMTSGKIKKFIQ++I
Sbjct: 181 NYRFAHTNIESLVKEYDDNGEGITIFRPLHLANKFEDKTVAYTEKKMTSGKIKKFIQDSI 240
Query: 886 FGICPHMTEDNKDLIQGKDLLLAYYDVDYEKNAKGSNYWRNRVMMVAKKFLDAG 1047
FG+CPHMTEDNKDLIQGKDLL AYYDVDYEKNAKGSNYWRNRVMMVAKKFLDAG
Sbjct: 241 FGLCPHMTEDNKDLIQGKDLLTAYYDVDYEKNAKGSNYWRNRVMMVAKKFLDAG 294
Score = 25.4 bits (54), Expect(2) = e-153
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +3
Query: 1050 ELNFAVASRKTF 1085
+LNFAVASRKTF
Sbjct: 296 KLNFAVASRKTF 307
Score = 65.5 bits (158), Expect = 7e-11
Identities = 38/119 (31%), Positives = 69/119 (57%), Gaps = 4/119 (3%)
Frame = +1
Query: 262 DNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRLK--GIVPLAKVDCTANTN 435
+NF+ +++ +L+EF+APWCGHCK L P+Y+ +L + +AK+D TAN +
Sbjct: 384 ENFDDIVNEEDKD--VLIEFYAPWCGHCKNLEPKYKELGEKLSKDPNIVIAKMDATAN-D 440
Query: 436 TCNKYGVSGYPTLKIFRDGEE--AGAYDGPRTADGIVSHLKKQAGPASVPLRTEEEFEK 606
+ Y V G+PT+ ++ Y+G R + +S+L+++A + P+ EE+ +K
Sbjct: 441 VPSPYEVKGFPTIYFSPANKKLTPKKYEGGRELNDFISYLQREA--TNPPIIQEEKPKK 497
>ref|NP_033917.2| protein disulfide-isomerase A4 [Mus musculus].
Length = 641
Score = 166 bits (421), Expect = 2e-41
Identities = 97/270 (35%), Positives = 154/270 (57%), Gaps = 7/270 (2%)
Frame = +1
Query: 247 LELTDDNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRL---KGIVPLAKVD 417
L LT DNF+ +++ A ++LVEF+APWCGHCK+LAPEYE AA L +PLAKVD
Sbjct: 176 LSLTKDNFDDVVNN---ADIILVEFYAPWCGHCKKLAPEYEKAAKELSKRSPPIPLAKVD 232
Query: 418 CTANTNTCNKYGVSGYPTLKIFRDGEEAGAYDGPRTADGIVSHLKKQAGPASVPLRTEEE 597
T T+ ++ VSGYPTLKIFR G Y+GPR GIV ++ +Q+GP S + T ++
Sbjct: 233 ATEQTDLAKRFDVSGYPTLKIFRKGRPFD-YNGPREKYGIVDYMIEQSGPPSKEILTLKQ 291
Query: 598 FEKFISD-KDASVVGFFKDLFSEAHSEFLKAASNLRDNYRFAHTNVESLVDKYDDDGEGI 774
++F+ D D ++G F+ A+ ++ AA+NLR++Y+F HT + +
Sbjct: 292 VQEFLKDGDDVVIIGLFQGDGDPAYLQYQDAANNLREDYKFHHTFSPEIAKFLKVSLGKL 351
Query: 775 TLFRPLHLMNKFEDK-TVAYTEPKMTSGKIKKFIQENIFGICPH-MTEDNKDLIQGKDLL 948
L P +K+E + V + + IK ++ ++ + H T ++ + L+
Sbjct: 352 VLTHPEKFQSKYEPRFHVMDVQGSTEASAIKDYVVKHALPLVGHRKTSNDAKRYSKRPLV 411
Query: 949 LAYYDVDYEKNAK-GSNYWRNRVMMVAKKF 1035
+ YY VD+ + + + +WRN+V+ VAK F
Sbjct: 412 VVYYSVDFSFDYRAATQFWRNKVLEVAKDF 441
Score = 100 bits (248), Expect = 3e-21
Identities = 59/161 (36%), Positives = 93/161 (57%), Gaps = 12/161 (7%)
Frame = +1
Query: 253 LTDDNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRLKGIVP---LAKVDCT 423
L D NF++ ++D + +L+EF+APWCGHCK+ APEYE A+ LK P +AK+D T
Sbjct: 63 LNDGNFDNFVADKDT---VLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDAT 119
Query: 424 ANTNTCNKYGVSGYPTLKIFRDGEEAGAYDGPRTADGIVSHLKKQAGPASVP------LR 585
+ + +K+ VSGYPT+KI + G +A YDG RT + IV+ +++ + P P
Sbjct: 120 SASMLASKFDVSGYPTIKILKKG-QAVDYDGSRTQEEIVAKVREVSQPDWTPPPEVTLSL 178
Query: 586 TEEEFEKFISDKDASVVGFFKDLFSEAHS---EFLKAASNL 699
T++ F+ +++ D +V F+ E+ KAA L
Sbjct: 179 TKDNFDDVVNNADIILVEFYAPWCGHCKKLAPEYEKAAKEL 219
Score = 65.9 bits (159), Expect = 6e-11
Identities = 39/106 (36%), Positives = 57/106 (53%), Gaps = 9/106 (8%)
Frame = +1
Query: 307 MLVEFFAPWCGHCKRLAPEYEAAATRLKG--IVPLAKVDCTANTNTCNKYGVSGYPTLKI 480
+L+EF+APWCGHCK+L P Y + + KG + +AK+D TAN T ++Y V G+PT+
Sbjct: 542 VLIEFYAPWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDATANDITNDQYKVEGFPTIYF 601
Query: 481 FRDGE-------EAGAYDGPRTADGIVSHLKKQAGPASVPLRTEEE 597
G+ E G D + I H K++ RT+EE
Sbjct: 602 APSGDKKNPIKFEGGNRDLEHLSKFIDEHATKRS-------RTKEE 640
>ref|NP_035162.1| protein disulfide-isomerase precursor [Mus musculus].
Length = 509
Score = 149 bits (375), Expect = 5e-36
Identities = 90/240 (37%), Positives = 133/240 (55%), Gaps = 5/240 (2%)
Frame = +1
Query: 241 DVLELTDDNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRLK---GIVPLAK 411
+VL L NFE ++ + +LVEF+APWCGHCK LAPEY AA +LK + LAK
Sbjct: 27 NVLVLKKSNFEEALA---AHKYLLVEFYAPWCGHCKALAPEYAKAAAKLKAEGSEIRLAK 83
Query: 412 VDCTANTNTCNKYGVSGYPTLKIFRDGEEAG--AYDGPRTADGIVSHLKKQAGPASVPLR 585
VD T ++ +YGV GYPT+K F++G+ A Y R AD IV+ LKK+ GPA+ L
Sbjct: 84 VDATEESDLAQQYGVRGYPTIKFFKNGDTASPKEYTAGREADDIVNWLKKRTGPAATTLS 143
Query: 586 TEEEFEKFISDKDASVVGFFKDLFSEAHSEFLKAASNLRDNYRFAHTNVESLVDKYDDDG 765
E + + +V+GFFKD+ S++ +FL AA + D+ F T+ + KY D
Sbjct: 144 DTAAAESLVDSSEVTVIGFFKDVESDSAKQFLLAAEAI-DDIPFGITSNSGVFSKYQLDK 202
Query: 766 EGITLFRPLHLMNKFEDKTVAYTEPKMTSGKIKKFIQENIFGICPHMTEDNKDLIQGKDL 945
+G+ LF+ KF++ + E ++T K+ FI+ N + TE I G ++
Sbjct: 203 DGVVLFK------KFDEGRNNF-EGEITKEKLLDFIKHNQLPLVIEFTEQTAPKIFGGEI 255
Score = 60.1 bits (144), Expect = 3e-09
Identities = 35/86 (40%), Positives = 47/86 (54%), Gaps = 4/86 (4%)
Frame = +1
Query: 307 MLVEFFAPWCGHCKRLAPEYEAAATRLKG--IVPLAKVDCTANTNTCNKYGVSGYPTLKI 480
+ VEF+APWCGHCK+LAP ++ K + +AK+D TAN K V +PTLK
Sbjct: 390 VFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIIIAKMDSTANEVEAVK--VHSFPTLKF 447
Query: 481 FRDGEEAGA--YDGPRTADGIVSHLK 552
F + Y+G RT DG L+
Sbjct: 448 FPASADRTVIDYNGERTLDGFKKFLE 473
>ref|NP_001074539.1| protein disulfide-isomerase A2 [Mus musculus].
Length = 527
Score = 121 bits (303), Expect = 1e-27
Identities = 71/197 (36%), Positives = 106/197 (53%), Gaps = 8/197 (4%)
Frame = +1
Query: 307 MLVEFFAPWCGHCKRLAPEYEAAATRL---KGIVPLAKVDCTANTNTCNKYGVSGYPTLK 477
++VEF+APWCGHCK LAPEY AA L +V LAKVD A ++ V GYPTLK
Sbjct: 65 LMVEFYAPWCGHCKELAPEYSKAAALLAAESAVVTLAKVDGPAEPELTKEFEVVGYPTLK 124
Query: 478 IFRDGEEAGA--YDGPRTADGIVSHLKKQAGPASVPLRTEEEFEKFISDKDASVVGFFKD 651
F++G Y GP+TA+GI L+++ GP++ L EE + ++ D V+GFF+D
Sbjct: 125 FFQNGNRTNPEEYAGPKTAEGIAEWLRRRVGPSATHLEDEEGVQALMAKWDMVVIGFFQD 184
Query: 652 LFSEAHSEFLKAASNLRDNYRFAHTNVESLVDKYDDDGEGITLFRPLHLMNKFEDKTVAY 831
L + + FL A + D F T+ L +K+ + + LF+ KF++ +
Sbjct: 185 LQGKDMATFLALAKDALD-MTFGFTDQPQLFEKFGLTKDTVVLFK------KFDEGRADF 237
Query: 832 TEPKMTS---GKIKKFI 873
K T G + +F+
Sbjct: 238 PVDKETGLDLGDLSRFL 254
Score = 64.7 bits (156), Expect = 1e-10
Identities = 35/96 (36%), Positives = 45/96 (46%)
Frame = +1
Query: 244 VLELTDDNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRLKGIVPLAKVDCT 423
V L NFE D + V+F+APWC HCK +AP +EA A + K + +
Sbjct: 393 VKTLVSKNFEQVAFDETKN--VFVKFYAPWCSHCKEMAPAWEALAEKYKDREDIVIAELD 450
Query: 424 ANTNTCNKYGVSGYPTLKIFRDGEEAGAYDGPRTAD 531
A N + V GYPTLK F G + D T D
Sbjct: 451 ATANELEAFSVLGYPTLKFFPAGPDRKVIDYKSTRD 486
>ref|XP_001476035.1| PREDICTED: protein disulfide-isomerase A6-like [Mus musculus].
Length = 391
Score = 110 bits (276), Expect = 2e-24
Identities = 65/170 (38%), Positives = 89/170 (52%), Gaps = 12/170 (7%)
Frame = +1
Query: 241 DVLELTDDNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRLK----GIVPLA 408
DV+ELTDD F+ + D S + +VEF+APWCGHCK L PE+ AAAT +K G V LA
Sbjct: 166 DVVELTDDTFDKNVLD--SEDVWMVEFYAPWCGHCKNLEPEWAAAATEVKEQTKGKVKLA 223
Query: 409 KVDCTANTNTCNKYGVSGYPTLKIFRDGEEAGAYDGPRTADGIVSHLKKQAGPASVPLRT 588
VD T N ++YG+ G+PT+KIF+ GE YDG RT IVS + P
Sbjct: 224 AVDATVNQVLASRYGIKGFPTIKIFQKGESPVDYDGGRTRSDIVSRALDLFSDNAPPPEL 283
Query: 589 EEEFEKFISDKD--------ASVVGFFKDLFSEAHSEFLKAASNLRDNYR 714
E + I+ K +V+ D + + +L+ L D Y+
Sbjct: 284 LEIINEDIAKKTCEEHQLCVVAVLPHILDTGAAGRNSYLEVLLKLADKYK 333
Score = 93.2 bits (230), Expect = 3e-19
Identities = 47/101 (46%), Positives = 64/101 (63%), Gaps = 1/101 (0%)
Frame = +1
Query: 241 DVLELTDDNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRLKGIVPLAKVDC 420
DV+ELT NF + S GL LVEF+APWCGHC+RL PE++ AAT LK +V + V+
Sbjct: 31 DVIELTPSNFNREVIQ--SDGLWLVEFYAPWCGHCQRLTPEWKKAATALKDVVKVGAVNA 88
Query: 421 TANTNTCNKYGVSGYPTLKIF-RDGEEAGAYDGPRTADGIV 540
+ + +YGV G+PT+KIF + + Y G RT + IV
Sbjct: 89 DKHQSLGGQYGVQGFPTIKIFGANKNKPEDYQGGRTGEAIV 129
>ref|XP_003085845.1| PREDICTED: protein disulfide-isomerase A6-like [Mus musculus].
Length = 432
Score = 110 bits (276), Expect = 2e-24
Identities = 65/170 (38%), Positives = 89/170 (52%), Gaps = 12/170 (7%)
Frame = +1
Query: 241 DVLELTDDNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRLK----GIVPLA 408
DV+ELTDD F+ + D S + +VEF+APWCGHCK L PE+ AAAT +K G V LA
Sbjct: 166 DVVELTDDTFDKNVLD--SEDVWMVEFYAPWCGHCKNLEPEWAAAATEVKEQTKGKVKLA 223
Query: 409 KVDCTANTNTCNKYGVSGYPTLKIFRDGEEAGAYDGPRTADGIVSHLKKQAGPASVPLRT 588
VD T N ++YG+ G+PT+KIF+ GE YDG RT IVS + P
Sbjct: 224 AVDATVNQVLASRYGIKGFPTIKIFQKGESPVDYDGGRTRSDIVSRALDLFSDNAPPPEL 283
Query: 589 EEEFEKFISDKD--------ASVVGFFKDLFSEAHSEFLKAASNLRDNYR 714
E + I+ K +V+ D + + +L+ L D Y+
Sbjct: 284 LEIINEDIAKKTCEEHQLCVVAVLPHILDTGAAGRNSYLEVLLKLADKYK 333
Score = 93.2 bits (230), Expect = 3e-19
Identities = 47/101 (46%), Positives = 64/101 (63%), Gaps = 1/101 (0%)
Frame = +1
Query: 241 DVLELTDDNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRLKGIVPLAKVDC 420
DV+ELT NF + S GL LVEF+APWCGHC+RL PE++ AAT LK +V + V+
Sbjct: 31 DVIELTPSNFNREVIQ--SDGLWLVEFYAPWCGHCQRLTPEWKKAATALKDVVKVGAVNA 88
Query: 421 TANTNTCNKYGVSGYPTLKIF-RDGEEAGAYDGPRTADGIV 540
+ + +YGV G+PT+KIF + + Y G RT + IV
Sbjct: 89 DKHQSLGGQYGVQGFPTIKIFGANKNKPEDYQGGRTGEAIV 129
>ref|NP_082235.1| protein disulfide-isomerase A6 [Mus musculus].
Length = 445
Score = 110 bits (275), Expect = 2e-24
Identities = 65/170 (38%), Positives = 89/170 (52%), Gaps = 12/170 (7%)
Frame = +1
Query: 241 DVLELTDDNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRLK----GIVPLA 408
DV+ELTDD F+ + D S + +VEF+APWCGHCK L PE+ AAAT +K G V LA
Sbjct: 166 DVVELTDDTFDKNVLD--SEDVWMVEFYAPWCGHCKNLEPEWAAAATEVKEQTKGKVKLA 223
Query: 409 KVDCTANTNTCNKYGVSGYPTLKIFRDGEEAGAYDGPRTADGIVSHLKKQAGPASVPLRT 588
VD T N ++YG+ G+PT+KIF+ GE YDG RT IVS + P
Sbjct: 224 AVDATMNQVLASRYGIKGFPTIKIFQKGESPVDYDGGRTRSDIVSRALDLFSDNAPPPEL 283
Query: 589 EEEFEKFISDKD--------ASVVGFFKDLFSEAHSEFLKAASNLRDNYR 714
E + I+ K +V+ D + + +L+ L D Y+
Sbjct: 284 LEIINEDIAKKTCEEHQLCVVAVLPHILDTGAAGRNSYLEVLLKLADKYK 333
Score = 93.2 bits (230), Expect = 3e-19
Identities = 47/101 (46%), Positives = 64/101 (63%), Gaps = 1/101 (0%)
Frame = +1
Query: 241 DVLELTDDNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRLKGIVPLAKVDC 420
DV+ELT NF + S GL LVEF+APWCGHC+RL PE++ AAT LK +V + V+
Sbjct: 31 DVIELTPSNFNREVIQ--SDGLWLVEFYAPWCGHCQRLTPEWKKAATALKDVVKVGAVNA 88
Query: 421 TANTNTCNKYGVSGYPTLKIF-RDGEEAGAYDGPRTADGIV 540
+ + +YGV G+PT+KIF + + Y G RT + IV
Sbjct: 89 DKHQSLGGQYGVQGFPTIKIFGANKNKPEDYQGGRTGEAIV 129
>ref|NP_663342.3| thioredoxin domain-containing protein 5 precursor [Mus musculus].
Length = 417
Score = 103 bits (256), Expect = 3e-22
Identities = 52/109 (47%), Positives = 72/109 (66%), Gaps = 3/109 (2%)
Frame = +1
Query: 244 VLELTDDNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATR-LKGI--VPLAKV 414
VL LT+ +FE DT + G+ V+F+APWCGHCK LAP +E + + G+ V +A+V
Sbjct: 309 VLALTEKSFE----DTIAQGITFVKFYAPWCGHCKNLAPTWEELSKKEFPGLSDVTIAEV 364
Query: 415 DCTANTNTCNKYGVSGYPTLKIFRDGEEAGAYDGPRTADGIVSHLKKQA 561
DCTA N C+KY V GYPTL +FR GE+ G ++G R D + S + +QA
Sbjct: 365 DCTAERNVCSKYSVRGYPTLLLFRGGEKVGEHNGGRDLDSLHSFVLRQA 413
Score = 88.2 bits (217), Expect = 1e-17
Identities = 47/120 (39%), Positives = 67/120 (55%), Gaps = 2/120 (1%)
Frame = +1
Query: 250 ELTDDNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRLKG--IVPLAKVDCT 423
EL+ +NFE +S G ++FFAPWCGHCK LAP +E A L+ V + KVDCT
Sbjct: 179 ELSANNFELHVSQ----GNHFIKFFAPWCGHCKALAPTWEQLALGLEHSETVKIGKVDCT 234
Query: 424 ANTNTCNKYGVSGYPTLKIFRDGEEAGAYDGPRTADGIVSHLKKQAGPASVPLRTEEEFE 603
+ C+++ V GYPTL FRDG++ Y G R + + +++ Q + T E E
Sbjct: 235 QHYAVCSEHQVRGYPTLLWFRDGKKVDQYKGKRDLESLRDYVQSQLQGSEAAPETVEPSE 294
Score = 84.0 bits (206), Expect = 2e-16
Identities = 38/74 (51%), Positives = 49/74 (66%), Gaps = 4/74 (5%)
Frame = +1
Query: 313 VEFFAPWCGHCKRLAPEYEAAATRLKGI----VPLAKVDCTANTNTCNKYGVSGYPTLKI 480
V FFAPWCGHC+RL P + + + V +AKVDCTA+++ C+ GV GYPTLK
Sbjct: 68 VMFFAPWCGHCQRLQPTWNDLGDKYNSMEDAKVYVAKVDCTADSDVCSAQGVRGYPTLKF 127
Query: 481 FRDGEEAGAYDGPR 522
F+ G+EA Y GPR
Sbjct: 128 FKPGQEAVKYQGPR 141
>ref|NP_938037.2| protein disulfide-isomerase TMX3 precursor [Mus musculus].
Length = 456
Score = 84.3 bits (207), Expect = 2e-16
Identities = 40/117 (34%), Positives = 67/117 (57%), Gaps = 3/117 (2%)
Frame = +1
Query: 262 DNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRLKGI---VPLAKVDCTANT 432
++ D + LV+F+APWCGHCK+L P + +K I V + K+D T+ +
Sbjct: 32 EDLNESFKDNRKDDIWLVDFYAPWCGHCKKLEPIWNEVGLEMKSIGSPVKVGKMDATSYS 91
Query: 433 NTCNKYGVSGYPTLKIFRDGEEAGAYDGPRTADGIVSHLKKQAGPASVPLRTEEEFE 603
+ +++GV GYPT+K+ + G+ A Y GPRT D I+ + +G PL +++ F+
Sbjct: 92 SIASEFGVRGYPTIKLLK-GDLAYNYRGPRTKDDIIEFAHRVSGALIRPLPSQQMFD 147
>ref|NP_082571.1| protein disulfide-isomerase A5 precursor [Mus musculus].
Length = 517
Score = 79.3 bits (194), Expect = 5e-15
Identities = 63/220 (28%), Positives = 101/220 (45%), Gaps = 27/220 (12%)
Frame = +1
Query: 244 VLELTDDNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRLKGIVP----LAK 411
V LTD++F+ + + S +LV F APWCGHCK++ PE+E+AA L G LA
Sbjct: 276 VYHLTDEDFDQFVKEHSS---VLVMFHAPWCGHCKKMKPEFESAAEVLHGDAESSGVLAA 332
Query: 412 VDCTANTNTCNKYGVSGYPTLKIFRDGEEAGAYDGPRTADGIVSHLKK-QAGPASVPLRT 588
VD T N ++ +S +PTLK F++GE+ A RT + ++ +A P P
Sbjct: 333 VDATVNEALAGRFHISAFPTLKYFKNGEQQ-AVPALRTKKKFIEWMQNPEAPPPPEPTWE 391
Query: 589 EEE----------FEKFISDKDASVVGFFKDLFSEAHS---EFLKAASNLRDNYRFAHTN 729
E++ F + K ++V F+ F A +++ + A
Sbjct: 392 EQQTSVLHLVGDNFRDTLKKKKHTLVMFYAPWCPHCKKVIPHFTATADAFKEDRKIACAA 451
Query: 730 VESLVDKYDD--DGEGITLFRPLH------LMNKFE-DKT 822
V+ + DK D E + + H L+ K+E D+T
Sbjct: 452 VDCVKDKNQDLCQQEAVKAYPTFHYYHYGKLVEKYESDRT 491
Score = 67.4 bits (163), Expect = 2e-11
Identities = 41/128 (32%), Positives = 66/128 (51%), Gaps = 16/128 (12%)
Frame = +1
Query: 307 MLVEFFAPWCGHCKRLAPEYEAAATRLKGIVPLAKVDCTAN--TNTCNKYGVSGYPTLKI 480
+L+ F+APWC CKR+ P ++ AAT+++G + LA ++ + N +Y V GYPT+
Sbjct: 171 LLMMFYAPWCSMCKRIMPHFQKAATQVRGHIVLAGMNVYPSEFENIKEEYNVRGYPTICY 230
Query: 481 FRDGEEAGAYDG-PRTADGIVSHLKKQAGP-------------ASVPLRTEEEFEKFISD 618
F G Y+ TA+ IV LK P SV T+E+F++F+ +
Sbjct: 231 FEKGRFLFPYENYGSTAEDIVEWLKNPLPPQPQVPETPWADEGGSVYHLTDEDFDQFVKE 290
Query: 619 KDASVVGF 642
+ +V F
Sbjct: 291 HSSVLVMF 298
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 29,308,041
Number of extensions: 668173
Number of successful extensions: 2078
Number of sequences better than 1.0e-05: 20
Number of HSP's gapped: 2045
Number of HSP's successfully gapped: 35
Length of query: 374
Length of database: 15,617,559
Length adjustment: 103
Effective length of query: 271
Effective length of database: 12,523,851
Effective search space: 3393963621
Effective search space used: 3393963621
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-001481
(1122 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001182041.1| protein disulfide-isomerase A3 [Sus scrofa]. 575 e-164
Alignment gi|XP_003130326.1| PREDICTED: protein disulfide-isomerase A4-li... 164 8e-41
Alignment gi|NP_001182048.1| protein disulfide-isomerase A6 [Sus scrofa]. 110 2e-24
Alignment gi|XP_003356566.1| PREDICTED: thioredoxin domain-containing pro... 99 3e-21
Alignment gi|XP_003354971.1| PREDICTED: potassium voltage-gated channel s... 87 1e-17
Alignment gi|XP_003121742.2| PREDICTED: protein disulfide-isomerase TMX3 ... 86 3e-17
Alignment gi|XP_003128223.2| PREDICTED: thioredoxin domain-containing pro... 82 5e-16
Alignment gi|XP_003132681.2| PREDICTED: protein disulfide-isomerase A5-li... 76 4e-14
Alignment gi|XP_003133574.2| PREDICTED: dnaJ homolog subfamily C member 1... 71 1e-12
Alignment gi|NP_001131101.1| endoplasmic reticulum resident protein 44 [S... 70 2e-12
>ref|NP_001182041.1| protein disulfide-isomerase A3 [Sus scrofa].
Length = 505
Score = 575 bits (1483), Expect = e-164
Identities = 283/295 (95%), Positives = 283/295 (95%)
Frame = +1
Query: 166 MRLCRLALFPGVXXXXXXXXXXXXSDVLELTDDNFESRISDTGSAGLMLVEFFAPWCGHC 345
MRLCRLALFPGV SDVLELTDDNFESRISDTGSAGLMLVEFFAPWCGHC
Sbjct: 1 MRLCRLALFPGVALLLAAARLAAASDVLELTDDNFESRISDTGSAGLMLVEFFAPWCGHC 60
Query: 346 KRLAPEYEAAATRLKGIVPLAKVDCTANTNTCNKYGVSGYPTLKIFRDGEEAGAYDGPRT 525
KRLAPEYEAAATRLKGIVPLAKVDCTANTNTCNKYGVSGYPTLKIFRDGEEAGAYDGPRT
Sbjct: 61 KRLAPEYEAAATRLKGIVPLAKVDCTANTNTCNKYGVSGYPTLKIFRDGEEAGAYDGPRT 120
Query: 526 ADGIVSHLKKQAGPASVPLRTEEEFEKFISDKDASVVGFFKDLFSEAHSEFLKAASNLRD 705
ADGIVSHLKKQAGPASVPLRTEEEFEKFISDKDASVVGFFKDLFSEAHSEFLKAASNLRD
Sbjct: 121 ADGIVSHLKKQAGPASVPLRTEEEFEKFISDKDASVVGFFKDLFSEAHSEFLKAASNLRD 180
Query: 706 NYRFAHTNVESLVDKYDDDGEGITLFRPLHLMNKFEDKTVAYTEPKMTSGKIKKFIQENI 885
NYRFAHTNVESLVDKYDDDGEGITLFRPLHLMNKFEDKTVAYTEPKMTSGKIKKFIQENI
Sbjct: 181 NYRFAHTNVESLVDKYDDDGEGITLFRPLHLMNKFEDKTVAYTEPKMTSGKIKKFIQENI 240
Query: 886 FGICPHMTEDNKDLIQGKDLLLAYYDVDYEKNAKGSNYWRNRVMMVAKKFLDAGK 1050
FGICPHMTEDNKDLIQGKDLLLAYYDVDYEKNAKGSNYWRNRVMMVAKKFLDAGK
Sbjct: 241 FGICPHMTEDNKDLIQGKDLLLAYYDVDYEKNAKGSNYWRNRVMMVAKKFLDAGK 295
Score = 67.8 bits (164), Expect = 1e-11
Identities = 39/119 (32%), Positives = 69/119 (57%), Gaps = 4/119 (3%)
Frame = +1
Query: 262 DNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRLK--GIVPLAKVDCTANTN 435
+NF+ ++D +L+EF+APWCGHCK L P+Y+ +L+ + +AK+D TAN +
Sbjct: 384 ENFDEIVNDENKD--VLIEFYAPWCGHCKNLEPKYKELGEKLRKDPNIIIAKMDATAN-D 440
Query: 436 TCNKYGVSGYPTLKIFRDGEEAG--AYDGPRTADGIVSHLKKQAGPASVPLRTEEEFEK 606
+ Y V G+PT+ ++ Y+G R +S+L+++A + P+ EE+ +K
Sbjct: 441 VPSPYEVRGFPTIYFSPANKKLNPKKYEGGRELSDFISYLQREA--TNPPIIQEEKPKK 497
>ref|XP_003130326.1| PREDICTED: protein disulfide-isomerase A4-like [Sus scrofa].
Length = 646
Score = 164 bits (415), Expect = 8e-41
Identities = 94/270 (34%), Positives = 154/270 (57%), Gaps = 7/270 (2%)
Frame = +1
Query: 247 LELTDDNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRL---KGIVPLAKVD 417
L LT DNF+ ++D A ++LVEF+APWCGHCK+LAPEYE AA L +PLAKVD
Sbjct: 181 LVLTKDNFDEVVND---ADIILVEFYAPWCGHCKKLAPEYERAAKELSKRSPPIPLAKVD 237
Query: 418 CTANTNTCNKYGVSGYPTLKIFRDGEEAGAYDGPRTADGIVSHLKKQAGPASVPLRTEEE 597
TA T+ ++ VSGYPTLKIFR G+ Y+GPR GIV ++ +Q+GP S + ++
Sbjct: 238 ATAETDLAKRFDVSGYPTLKIFRKGKPFD-YNGPREKYGIVDYMIEQSGPPSKQILALKQ 296
Query: 598 FEKFISD-KDASVVGFFKDLFSEAHSEFLKAASNLRDNYRFAHTNVESLVDKYDDDGEGI 774
++F+ D D ++G F A+ ++ AA++LR++Y+ HT + + +
Sbjct: 297 VQEFLKDGDDVIIIGVFNSESDPAYQQYQDAANSLREDYKLYHTFSTEIAKFLKVSPDKL 356
Query: 775 TLFRPLHLMNKFEDKT-VAYTEPKMTSGKIKKFIQENIFGICPHMTEDN-KDLIQGKDLL 948
+ +P +K+E ++ V + + + IK+ + + + H N + L+
Sbjct: 357 VVMQPEKFQSKYEPQSHVLHIQGSTEASAIKEHVLKYTLPLVGHRKASNDAKRYSRRPLV 416
Query: 949 LAYYDVDYEKNAK-GSNYWRNRVMMVAKKF 1035
+ YY VD+ + + + +WR++V+ VAK F
Sbjct: 417 VVYYGVDFSFDYRAATQFWRSKVLEVAKDF 446
Score = 110 bits (274), Expect = 2e-24
Identities = 57/143 (39%), Positives = 93/143 (65%), Gaps = 9/143 (6%)
Frame = +1
Query: 244 VLELTDDNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRLK---GIVPLAKV 414
VL L D NF++ ++D + +L+EF+APWCGHCK+ APEYE AT LK +P+AK+
Sbjct: 65 VLVLKDSNFDNFVADKDT---VLLEFYAPWCGHCKQFAPEYEKIATTLKENDPPIPVAKI 121
Query: 415 DCTANTNTCNKYGVSGYPTLKIFRDGEEAGAYDGPRTADGIVSHLKKQAGPASVP----- 579
D T+ + +++ VSGYPT+KI + G +A Y+G RT + IV+ +K+ + P +P
Sbjct: 122 DATSESELASRFDVSGYPTIKILKKG-QAVDYEGSRTQEEIVAKVKEISQPNWIPPPEVT 180
Query: 580 -LRTEEEFEKFISDKDASVVGFF 645
+ T++ F++ ++D D +V F+
Sbjct: 181 LVLTKDNFDEVVNDADIILVEFY 203
Score = 67.8 bits (164), Expect = 1e-11
Identities = 37/102 (36%), Positives = 58/102 (56%), Gaps = 5/102 (4%)
Frame = +1
Query: 307 MLVEFFAPWCGHCKRLAPEYEAAATRLKG--IVPLAKVDCTANTNTCNKYGVSGYPTLKI 480
+L+EF+APWCGHCK+L P Y + + KG + +AK+D T+N T ++Y V G+PT+
Sbjct: 547 VLIEFYAPWCGHCKQLEPVYTSLGKKYKGHKNLVIAKMDATSNDITNDRYKVEGFPTIYF 606
Query: 481 FRDGEEAGAY---DGPRTADGIVSHLKKQAGPASVPLRTEEE 597
G++ DG R + + ++ A S RT+EE
Sbjct: 607 APSGDKKNPIKFEDGNRDLEHLSKFIEDHATKLS---RTKEE 645
>ref|NP_001182048.1| protein disulfide-isomerase A6 [Sus scrofa].
Length = 440
Score = 110 bits (274), Expect = 2e-24
Identities = 64/170 (37%), Positives = 90/170 (52%), Gaps = 12/170 (7%)
Frame = +1
Query: 241 DVLELTDDNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRLK----GIVPLA 408
DV+ELTDD F+ + D S + +VEF+APWCGHCK L PE+ AAAT +K G V LA
Sbjct: 161 DVIELTDDTFDKNVLD--SEDVWMVEFYAPWCGHCKNLEPEWAAAATEVKEQTKGKVKLA 218
Query: 409 KVDCTANTNTCNKYGVSGYPTLKIFRDGEEAGAYDGPRTADGIVSHL-----KKQAGPAS 573
VD T N ++YG+ G+PT+KIF+ GE YDG RT IV+ P
Sbjct: 219 AVDATVNQVLASRYGIRGFPTIKIFQKGESPVDYDGGRTRSDIVTRALDLFSDNAPPPEL 278
Query: 574 VPLRTEEEFEKFISDKDASVVGFFK---DLFSEAHSEFLKAASNLRDNYR 714
+ + +E+ +K + VV D + + +L+ L D Y+
Sbjct: 279 LEIISEDVAKKSCEEHQLCVVAVLPHILDTGAAGRNSYLEVLLKLADKYK 328
Score = 92.4 bits (228), Expect = 4e-19
Identities = 46/101 (45%), Positives = 62/101 (61%), Gaps = 1/101 (0%)
Frame = +1
Query: 241 DVLELTDDNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRLKGIVPLAKVDC 420
DV+ELT NF + + S L LVEF+APWCGHC+RL PE++ AT LK +V + VD
Sbjct: 26 DVIELTPSNFNREVIQSDS--LWLVEFYAPWCGHCQRLTPEWKKVATALKDVVKVGAVDA 83
Query: 421 TANTNTCNKYGVSGYPTLKIFRDGEEAGA-YDGPRTADGIV 540
+ + +YGV G+PT+KIF + Y G RT + IV
Sbjct: 84 DKHQSLGGQYGVQGFPTIKIFGSNKNRPEDYQGGRTGEAIV 124
>ref|XP_003356566.1| PREDICTED: thioredoxin domain-containing protein 5-like [Sus
scrofa].
Length = 204
Score = 99.4 bits (246), Expect = 3e-21
Identities = 50/110 (45%), Positives = 71/110 (64%), Gaps = 4/110 (3%)
Frame = +1
Query: 244 VLELTDDNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATR----LKGIVPLAK 411
VL LT+DNF+ DT + G+ ++F+APWCGHCK LAP +E + + L G V +A+
Sbjct: 96 VLALTEDNFD----DTVAEGVTFIKFYAPWCGHCKNLAPIWEQLSRKEFPGLAG-VKIAE 150
Query: 412 VDCTANTNTCNKYGVSGYPTLKIFRDGEEAGAYDGPRTADGIVSHLKKQA 561
VDCTA + C+KY V GYPTL +FR G++ G + G R D + + +QA
Sbjct: 151 VDCTAERDLCSKYSVRGYPTLLLFRGGKKVGEHSGGRDLDSLHRFVLRQA 200
>ref|XP_003354971.1| PREDICTED: potassium voltage-gated channel subfamily F member
1-like [Sus scrofa].
Length = 651
Score = 87.4 bits (215), Expect = 1e-17
Identities = 60/173 (34%), Positives = 90/173 (52%), Gaps = 1/173 (0%)
Frame = +1
Query: 241 DVLELTDDNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRLKGIVPLAKVDC 420
DV+ELT NF + + S L LVEF+APWCGHC+RL PE++ AT LK +V + VD
Sbjct: 176 DVIELTPSNFNREVIQSDS--LWLVEFYAPWCGHCQRLTPEWKKVATALKDVVKVGAVDA 233
Query: 421 TANTNTCNKYGVSGYPTLKIFRDGEEAGAYDGPRTADGIVSHLKKQAGPASVPLRTEEEF 600
+ + +YGV G+PT+KIF + + P G K A AS+P R F
Sbjct: 234 DKHQSLGGQYGVQGFPTIKIFGSNK-----NRPEDYQG------KAAPGASLPWR-GFSF 281
Query: 601 EKFISDKDASVVGFFKDLFSEAHSEFLKA-ASNLRDNYRFAHTNVESLVDKYD 756
++ I +V G + L+ + S++ + + L + + + SL D YD
Sbjct: 282 QQII----VNVGGVRQVLYGDLLSQYPETRLAELINCLAGGYDTIFSLCDDYD 330
>ref|XP_003121742.2| PREDICTED: protein disulfide-isomerase TMX3 [Sus scrofa].
Length = 444
Score = 86.3 bits (212), Expect = 3e-17
Identities = 41/117 (35%), Positives = 68/117 (58%), Gaps = 3/117 (2%)
Frame = +1
Query: 262 DNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRLKGI---VPLAKVDCTANT 432
++ + D + LV+F+APWCGHCK+L P + +K I V + K+D T+ +
Sbjct: 19 EDLDESFKDNRKDDIWLVDFYAPWCGHCKKLEPIWNEVGLEMKSIGSPVKVGKMDATSYS 78
Query: 433 NTCNKYGVSGYPTLKIFRDGEEAGAYDGPRTADGIVSHLKKQAGPASVPLRTEEEFE 603
+ +++GV GYPT+K+ + G+ A Y GPRT D I+ + +G PL +++ FE
Sbjct: 79 SIASEFGVRGYPTIKLLK-GDLAYNYRGPRTKDDIIEFAHRVSGALIRPLPSQQMFE 134
>ref|XP_003128223.2| PREDICTED: thioredoxin domain-containing protein 5-like [Sus
scrofa].
Length = 315
Score = 82.0 bits (201), Expect = 5e-16
Identities = 41/92 (44%), Positives = 55/92 (59%), Gaps = 5/92 (5%)
Frame = +1
Query: 313 VEFFAPWCGHCKRLAPEYEAAATRLK--GIVPLAKVDCTANTNTCNKYGVSGYPTLKIFR 486
++FFAPWCGHCK LAP +E A L+ V + KVDCT + C+ V GYPTL FR
Sbjct: 97 IKFFAPWCGHCKALAPTWEQLALGLEHSATVKIGKVDCTQHYELCSGNQVRGYPTLLWFR 156
Query: 487 DGEEAGAYDGPRTADGIVSHLKKQ---AGPAS 573
DG++ Y G R D + +++ Q AGP +
Sbjct: 157 DGKKVDQYKGKRDLDSLREYVQAQLQSAGPGT 188
Score = 71.6 bits (174), Expect = 7e-13
Identities = 36/80 (45%), Positives = 50/80 (62%), Gaps = 4/80 (5%)
Frame = +1
Query: 334 CGHCKRLAPEYEAAATR----LKGIVPLAKVDCTANTNTCNKYGVSGYPTLKIFRDGEEA 501
CGHCK LAP +E + + L G V +A+VDCTA + C+KY V GYPTL +FR G++
Sbjct: 233 CGHCKNLAPIWEQLSRKEFPGLAG-VKIAEVDCTAERDLCSKYSVRGYPTLLLFRGGKKV 291
Query: 502 GAYDGPRTADGIVSHLKKQA 561
G + G R D + + +QA
Sbjct: 292 GEHSGGRDLDSLHRFVLRQA 311
>ref|XP_003132681.2| PREDICTED: protein disulfide-isomerase A5-like isoform 2 [Sus
scrofa].
Length = 312
Score = 75.9 bits (185), Expect = 4e-14
Identities = 55/190 (28%), Positives = 87/190 (45%), Gaps = 18/190 (9%)
Frame = +1
Query: 244 VLELTDDNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRLKGIVP----LAK 411
V LTD++F+ + + S +LV F APWCGHCK++ PE+E AA L G LA
Sbjct: 71 VYHLTDEDFDQFVKEHSS---VLVMFHAPWCGHCKKMKPEFENAAEVLHGEADSSGVLAA 127
Query: 412 VDCTANTNTCNKYGVSGYPTLKIFRDGEEAGAYDGPRTADGIVSHLKKQAGP-------- 567
VD T + ++ +S +PTLK F++GE+ A RT V ++ P
Sbjct: 128 VDATVHKALAERFHISEFPTLKYFKNGEKY-AVPALRTKKNFVEWMRNPEAPPPPDPTWE 186
Query: 568 ---ASVPLRTEEEFEKFISDKDASVVGFFKDLFSEAHS---EFLKAASNLRDNYRFAHTN 729
SV + + F + + K ++V F+ F A +D+ + A
Sbjct: 187 EQQTSVLHLSGDNFRETLKRKKHTLVMFYAPWCPHCKKVIPHFTATADVFKDDRKIACAA 246
Query: 730 VESLVDKYDD 759
V+ + +K D
Sbjct: 247 VDCIKEKNQD 256
Score = 65.5 bits (158), Expect = 5e-11
Identities = 38/109 (34%), Positives = 52/109 (47%), Gaps = 4/109 (3%)
Frame = +1
Query: 238 SDVLELTDDNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRLKGI--VPLAK 411
+ VL L+ DNF + LV F+APWC HCK++ P + A A K + A
Sbjct: 190 TSVLHLSGDNFRETLKRKKHT---LVMFYAPWCPHCKKVIPHFTATADVFKDDRKIACAA 246
Query: 412 VDCTA--NTNTCNKYGVSGYPTLKIFRDGEEAGAYDGPRTADGIVSHLK 552
VDC N + C + V YPT + G+ A YD RT G S ++
Sbjct: 247 VDCIKEKNQDLCQQEAVKAYPTFHYYHYGKLAEKYDSDRTELGFTSFIR 295
>ref|XP_003133574.2| PREDICTED: dnaJ homolog subfamily C member 10, partial [Sus
scrofa].
Length = 653
Score = 71.2 bits (173), Expect = 1e-12
Identities = 38/134 (28%), Positives = 62/134 (46%), Gaps = 7/134 (5%)
Frame = +1
Query: 241 DVLELTDDNFESRISDTGSAGL-------MLVEFFAPWCGHCKRLAPEYEAAATRLKGIV 399
D+L ++ S ++ G LV+FFAPWC C+ L PE A+ L G +
Sbjct: 302 DILAFAKESVNSHVTTLGPQNFPTSDKEPWLVDFFAPWCPPCRALLPELRKASKHLYGQL 361
Query: 400 PLAKVDCTANTNTCNKYGVSGYPTLKIFRDGEEAGAYDGPRTADGIVSHLKKQAGPASVP 579
+DCT + CN Y + YPT +F Y+G +A+ I+ ++ P+ V
Sbjct: 362 KFGTLDCTVHEGLCNMYNIQAYPTTVVFNQ-SNIHEYEGHHSAEQILEFVEDLMNPSVVS 420
Query: 580 LRTEEEFEKFISDK 621
L T F++ + +
Sbjct: 421 L-TPTTFDELVRQR 433
Score = 70.5 bits (171), Expect = 2e-12
Identities = 32/79 (40%), Positives = 45/79 (56%)
Frame = +1
Query: 247 LELTDDNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRLKGIVPLAKVDCTA 426
++LT F ++ S +V+F+APWCG C+ APE+E A +K V KVDC A
Sbjct: 533 IDLTPQTFNEKVLQGKSH--WVVDFYAPWCGPCQNFAPEFELLARMVKEKVKAGKVDCQA 590
Query: 427 NTNTCNKYGVSGYPTLKIF 483
TC K G+ YPT+K +
Sbjct: 591 YAQTCQKAGIRAYPTVKFY 609
Score = 61.6 bits (148), Expect = 8e-10
Identities = 30/83 (36%), Positives = 44/83 (53%)
Frame = +1
Query: 295 SAGLMLVEFFAPWCGHCKRLAPEYEAAATRLKGIVPLAKVDCTANTNTCNKYGVSGYPTL 474
S L V F++ C HC LAP + A + G++ + V+C + C GVS YP+L
Sbjct: 5 SGELWFVNFYSSGCSHCHDLAPTWRDFAREVDGLLRIGAVNCGDDRMLCRMKGVSSYPSL 64
Query: 475 KIFRDGEEAGAYDGPRTADGIVS 543
IFR G A Y G R+ + +V+
Sbjct: 65 FIFRSGMAAVKYHGDRSKESLVN 87
Score = 55.8 bits (133), Expect = 4e-08
Identities = 23/80 (28%), Positives = 42/80 (52%)
Frame = +1
Query: 244 VLELTDDNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRLKGIVPLAKVDCT 423
V+ LT F+ + + +V+F++PWC C+ L PE++ A L G++ + +DC
Sbjct: 418 VVSLTPTTFDELVRQRKPDEVWMVDFYSPWCHPCQVLMPEWKRMARTLTGLINVGSIDCQ 477
Query: 424 ANTNTCNKYGVSGYPTLKIF 483
+ C + V YP ++ F
Sbjct: 478 QYHSLCAQENVRRYPEIRFF 497
>ref|NP_001131101.1| endoplasmic reticulum resident protein 44 [Sus scrofa].
Length = 406
Score = 70.5 bits (171), Expect = 2e-12
Identities = 65/251 (25%), Positives = 108/251 (43%), Gaps = 25/251 (9%)
Frame = +1
Query: 250 ELTDDNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRLKGIVP------LAK 411
E+T + E+ +A + LV F+A WC + L P +E A+ +K P A+
Sbjct: 30 EITSLDTENIDDILNNADVALVNFYADWCRFSQMLHPIFEEASNVIKEEYPNENQVVFAR 89
Query: 412 VDCTANTNTCNKYGVSGYPTLKIFRDG-EEAGAYDGPRTADGIVSHLKKQAGPASVPLRT 588
VDC +++ +Y +S YPTLK+FR+G Y G R+ + ++++Q L
Sbjct: 90 VDCDQHSDIAQRYRISKYPTLKLFRNGMMMKREYRGQRSVKALADYIRQQKSDPIQELHD 149
Query: 589 EEEFEKFISDKDASVVGFFKDLFSEAHSEFLKAASNLRDNYRFAHT-NVESLVDKYDDDG 765
E K +++G+F+ SE + F + A L D+ F S ++Y G
Sbjct: 150 LAEITTLDRSK-RNIIGYFEQKDSENYRVFERVAKILHDDCTFLSAFGAVSKPERY--SG 206
Query: 766 EGITLFRPLH----------------LMNKFEDKTVAYTEPKMTSGKIKKFIQENI-FGI 894
+ I P H N +DK V ++T ++ +E + F I
Sbjct: 207 DNIVYKPPGHSAPDMVYLGYMTNFDGTFNWIQDKCVPLVR-EITFENGEELTEEGLPFLI 265
Query: 895 CPHMTEDNKDL 927
HM ED + L
Sbjct: 266 LFHMKEDTESL 276
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 21,507,032
Number of extensions: 487748
Number of successful extensions: 1505
Number of sequences better than 1.0e-05: 16
Number of HSP's gapped: 1483
Number of HSP's successfully gapped: 25
Length of query: 374
Length of database: 11,343,932
Length adjustment: 100
Effective length of query: 274
Effective length of database: 8,854,232
Effective search space: 2426059568
Effective search space used: 2426059568
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-001481
(1122 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr01 662 0.0
>Sscrofa_Chr01
|| Length = 315321322
Score = 662 bits (334), Expect = 0.0
Identities = 334/334 (100%)
Strand = Plus / Minus
Query: 2 gccacactgcggcccagccgggctggggggttgggacctccggctgcaggtccgcctggg 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142643908 gccacactgcggcccagccgggctggggggttgggacctccggctgcaggtccgcctggg 142643849
Query: 62 tcagacgcgcgagctgaggcagagggtgagtggtcgccggcacggcctccgcagtccccg 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142643848 tcagacgcgcgagctgaggcagagggtgagtggtcgccggcacggcctccgcagtccccg 142643789
Query: 122 ccgaaccctgaccctcctggccgcccccgcctcagctggtcgccatgcgcctctgccgcc 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142643788 ccgaaccctgaccctcctggccgcccccgcctcagctggtcgccatgcgcctctgccgcc 142643729
Query: 182 tagcgctgttcccgggcgtggcgcttcttctcgccgccgcccgcctcgccgctgcctccg 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142643728 tagcgctgttcccgggcgtggcgcttcttctcgccgccgcccgcctcgccgctgcctccg 142643669
Query: 242 acgtgctggaactcaccgacgacaacttcgagagtcgcatctccgacacgggctctgcgg 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142643668 acgtgctggaactcaccgacgacaacttcgagagtcgcatctccgacacgggctctgcgg 142643609
Query: 302 ggctcatgctcgtggagttctttgccccctggtg 335
||||||||||||||||||||||||||||||||||
Sbjct: 142643608 ggctcatgctcgtggagttctttgccccctggtg 142643575
Score = 262 bits (132), Expect = 4e-67
Identities = 132/132 (100%)
Strand = Plus / Minus
Query: 637 ggttttttcaaggatttattcagtgaagctcactctgagtttctaaaagcagccagcaac 696
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142623744 ggttttttcaaggatttattcagtgaagctcactctgagtttctaaaagcagccagcaac 142623685
Query: 697 ttgagggataactaccgatttgcacacaccaatgttgaatctctggtggacaagtatgat 756
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142623684 ttgagggataactaccgatttgcacacaccaatgttgaatctctggtggacaagtatgat 142623625
Query: 757 gatgatggagag 768
||||||||||||
Sbjct: 142623624 gatgatggagag 142623613
Score = 242 bits (122), Expect = 3e-61
Identities = 125/126 (99%)
Strand = Plus / Minus
Query: 885 ttttggtatctgccctcacatgacagaagacaataaagatttgatacagggcaaggactt 944
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142621138 ttttggtatctgccctcacatgacagaagacaataaagatttgatacagggcaaggactt 142621079
Query: 945 actgctggcttactatgatgtggactatgaaaagaatgctaaaggttccaactactggag 1004
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 142621078 actgctggcttactatgatgtggactatgaaaagaatgctaaaggttccaactactggcg 142621019
Query: 1005 aaacag 1010
||||||
Sbjct: 142621018 aaacag 142621013
Score = 238 bits (120), Expect = 5e-60
Identities = 120/120 (100%)
Strand = Plus / Minus
Query: 410 aggttgattgtactgccaatacaaatacttgtaataagtatggagtgagtggatatccaa 469
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142633399 aggttgattgtactgccaatacaaatacttgtaataagtatggagtgagtggatatccaa 142633340
Query: 470 ccctgaagatatttagagatggtgaagaagcaggtgcttatgatgggcccaggactgctg 529
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142633339 ccctgaagatatttagagatggtgaagaagcaggtgcttatgatgggcccaggactgctg 142633280
Score = 232 bits (117), Expect = 3e-58
Identities = 117/117 (100%)
Strand = Plus / Minus
Query: 768 gggtatcaccttgtttcggcctttacatctgatgaacaagtttgaggacaagactgtggc 827
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142621583 gggtatcaccttgtttcggcctttacatctgatgaacaagtttgaggacaagactgtggc 142621524
Query: 828 atatacagaaccgaaaatgaccagtggaaagattaaaaaatttattcaggaaaacat 884
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142621523 atatacagaaccgaaaatgaccagtggaaagattaaaaaatttattcaggaaaacat 142621467
Score = 220 bits (111), Expect = 1e-54
Identities = 111/111 (100%)
Strand = Plus / Minus
Query: 529 gatggaattgtcagccacctgaagaagcaggctggtccagcttcagttcctctcagaact 588
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142626378 gatggaattgtcagccacctgaagaagcaggctggtccagcttcagttcctctcagaact 142626319
Query: 589 gaggaagagtttgaaaagttcattagtgataaagatgcttctgtggtgggt 639
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142626318 gaggaagagtttgaaaagttcattagtgataaagatgcttctgtggtgggt 142626268
Score = 172 bits (87), Expect = 3e-40
Identities = 112/117 (95%), Gaps = 3/117 (2%)
Strand = Plus / Minus
Query: 1009 agagtgatgatggtggcaaagaaattcctagatgctgggaag-aactcaactttgctgta 1067
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 142620373 agagtgatgatggtggcaaagaaattcctagatgctgggaagaaactcaactttgctgta 142620314
Query: 1068 gctagccgcaaaaccttta-ncatgaactttctgattttggc-tggnaagcactgct 1122
||||||||||||||||||| ||||||||||||||||||||| ||| ||||||||||
Sbjct: 142620313 gctagccgcaaaacctttagtcatgaactttctgattttggcttggaaagcactgct 142620257
Score = 163 bits (82), Expect = 3e-37
Identities = 82/82 (100%)
Strand = Plus / Minus
Query: 332 ggtgtggacactgcaagaggcttgcacctgaatatgaagcggcagctaccaggttaaaag 391
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142635717 ggtgtggacactgcaagaggcttgcacctgaatatgaagcggcagctaccaggttaaaag 142635658
Query: 392 gaatagttccattagcaaaggt 413
||||||||||||||||||||||
Sbjct: 142635657 gaatagttccattagcaaaggt 142635636
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 32,505,853
Number of extensions: 216
Number of successful extensions: 216
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 214
Number of HSP's successfully gapped: 8
Length of query: 1122
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 1101
Effective length of database: 2,808,413,156
Effective search space: 3092062884756
Effective search space used: 3092062884756
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)