Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-001563
(1480 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_776770.2| heat shock cognate 71 kDa protein [Bos taurus]. 736 0.0
Alignment gi|NP_976067.2| heat shock 70 kDa protein 1B [Bos taurus]. 665 0.0
Alignment gi|NP_776975.1| heat shock 70 kDa protein 1A [Bos taurus]. 663 0.0
Alignment gi|NP_001161367.1| heat shock 70 kDa protein 1-like [Bos taurus]. 655 0.0
Alignment gi|NP_776769.1| heat shock-related 70 kDa protein 2 [Bos taurus]. 648 0.0
Alignment gi|XP_002685896.1| PREDICTED: heat shock protein 70-like [Bos t... 619 0.0
Alignment gi|XP_589747.1| PREDICTED: heat shock protein 70-like [Bos taur... 619 0.0
Alignment gi|NP_001068616.1| 78 kDa glucose-regulated protein precursor [... 506 e-145
Alignment gi|NP_001029696.1| stress-70 protein, mitochondrial precursor [... 373 e-103
Alignment gi|NP_001039853.1| heat shock 70 kDa protein 14 [Bos taurus]. 263 4e-70
>ref|NP_776770.2| heat shock cognate 71 kDa protein [Bos taurus].
Length = 650
Score = 736 bits (1900), Expect(2) = 0.0
Identities = 377/398 (94%), Positives = 380/398 (95%)
Frame = +3
Query: 150 MSKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 329
MSKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA
Sbjct: 1 MSKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 60
Query: 330 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFVVVNDAGRPKVQVEYKGETKSFYPEEVS 509
MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPF+VVNDAGRPKVQVEYKGETKSFYPEEVS
Sbjct: 61 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120
Query: 510 SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAA 689
SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAA
Sbjct: 121 SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAT 180
Query: 690 IAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNH 869
IAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNH
Sbjct: 181 IAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNH 240
Query: 870 FIAEFKGKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRA 1049
FIAEFK KHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRA
Sbjct: 241 FIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRA 300
Query: 1050 RFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLMGGSTRIPKIQKLLQDFFNGKETE 1229
RFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVL+GGSTRIPKIQKLLQDFFNGKE
Sbjct: 301 RFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELN 360
Query: 1230 *SIHPDEXXXXXXXXXXXHLSGDKSENVSDLLLLDVTP 1343
SI+PDE LSGDKSENV DLLLLDVTP
Sbjct: 361 KSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTP 398
Score = 45.8 bits (107), Expect(2) = 0.0
Identities = 24/40 (60%), Positives = 25/40 (62%)
Frame = +2
Query: 1361 TAVGIMTVLIKRNXXXXXXXXXXXXXYSDXQPGVLIQVYE 1480
TA G+MTVLIKRN YSD QPGVLIQVYE
Sbjct: 405 TAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYE 444
>ref|NP_976067.2| heat shock 70 kDa protein 1B [Bos taurus].
Length = 641
Score = 665 bits (1715), Expect(2) = 0.0
Identities = 333/398 (83%), Positives = 359/398 (90%)
Frame = +3
Query: 150 MSKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 329
M+K A+GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA
Sbjct: 1 MAKNMAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 60
Query: 330 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFVVVNDAGRPKVQVEYKGETKSFYPEEVS 509
+NP NTVFDAKRLIGR+F D VVQSDMKHWPF V+ND +PKVQV YKGETK+FYPEE+S
Sbjct: 61 LNPQNTVFDAKRLIGRKFGDPVVQSDMKHWPFRVINDGDKPKVQVSYKGETKAFYPEEIS 120
Query: 510 SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAA 689
SMVLTKMKEIAEAYLG VTNAV+TVPAYFNDSQRQATKDAG IAGLNVLRIINEPTAAA
Sbjct: 121 SMVLTKMKEIAEAYLGHPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAA 180
Query: 690 IAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNH 869
I YGLD+ ERNVLIFDLGGGTFDVSILTI+DGIFEVK+TAGDTHLGGEDFDNR+VNH
Sbjct: 181 ITYGLDRTGKGERNVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRLVNH 240
Query: 870 FIAEFKGKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRA 1049
F+ EFK KHKKDIS+NKRAVRRLRTACERAKRTLSSSTQAS+EIDSL+EGIDFYTSITRA
Sbjct: 241 FVEEFKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQASLEIDSLFEGIDFYTSITRA 300
Query: 1050 RFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLMGGSTRIPKIQKLLQDFFNGKETE 1229
RFEEL +DLFR TL+PVEKALRDAKLDK+QIHD+VL+GGSTRIPK+QKLLQDFFNG++
Sbjct: 301 RFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDLN 360
Query: 1230 *SIHPDEXXXXXXXXXXXHLSGDKSENVSDLLLLDVTP 1343
SI+PDE L GDKSENV DLLLLDV P
Sbjct: 361 KSINPDEAVAYGAAVQAAILMGDKSENVQDLLLLDVAP 398
Score = 44.3 bits (103), Expect(2) = 0.0
Identities = 23/40 (57%), Positives = 24/40 (60%)
Frame = +2
Query: 1361 TAVGIMTVLIKRNXXXXXXXXXXXXXYSDXQPGVLIQVYE 1480
TA G+MT LIKRN YSD QPGVLIQVYE
Sbjct: 405 TAGGVMTALIKRNSTIPTKQTQIFTTYSDNQPGVLIQVYE 444
>ref|NP_776975.1| heat shock 70 kDa protein 1A [Bos taurus].
Length = 641
Score = 663 bits (1711), Expect(2) = 0.0
Identities = 333/398 (83%), Positives = 359/398 (90%)
Frame = +3
Query: 150 MSKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 329
M+K A+GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA
Sbjct: 1 MAKNMAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 60
Query: 330 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFVVVNDAGRPKVQVEYKGETKSFYPEEVS 509
+NP NTVFDAKRLIGR+F D VVQSDMK WPF V+ND +PKVQV YKGETK+FYPEE+S
Sbjct: 61 LNPQNTVFDAKRLIGRKFGDPVVQSDMKEWPFRVINDGDKPKVQVSYKGETKAFYPEEIS 120
Query: 510 SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAA 689
SMVLTKMKEIAEAYLG VTNAV+TVPAYFNDSQRQATKDAG IAGLNVLRIINEPTAAA
Sbjct: 121 SMVLTKMKEIAEAYLGHPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAA 180
Query: 690 IAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNH 869
IAYGLD+ ERNVLIFDLGGGTFDVSILTI+DGIFEVK+TAGDTHLGGEDFDNR+VNH
Sbjct: 181 IAYGLDRTGKGERNVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRLVNH 240
Query: 870 FIAEFKGKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRA 1049
F+ EFK KHKKDIS+NKRAVRRLRTACERAKRTLSSSTQAS+EIDSL+EGIDFYTSITRA
Sbjct: 241 FVEEFKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQASLEIDSLFEGIDFYTSITRA 300
Query: 1050 RFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLMGGSTRIPKIQKLLQDFFNGKETE 1229
RFEEL +DLFR TL+PVEKALRDAKLDK+QIHD+VL+GGSTRIPK+QKLLQDFFNG++
Sbjct: 301 RFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDLN 360
Query: 1230 *SIHPDEXXXXXXXXXXXHLSGDKSENVSDLLLLDVTP 1343
SI+PDE L GDKSENV DLLLLDV P
Sbjct: 361 KSINPDEAVAYGAAVQAAILMGDKSENVQDLLLLDVAP 398
Score = 44.3 bits (103), Expect(2) = 0.0
Identities = 23/40 (57%), Positives = 24/40 (60%)
Frame = +2
Query: 1361 TAVGIMTVLIKRNXXXXXXXXXXXXXYSDXQPGVLIQVYE 1480
TA G+MT LIKRN YSD QPGVLIQVYE
Sbjct: 405 TAGGVMTALIKRNSTIPTKQTQIFTTYSDNQPGVLIQVYE 444
>ref|NP_001161367.1| heat shock 70 kDa protein 1-like [Bos taurus].
Length = 641
Score = 655 bits (1690), Expect(2) = 0.0
Identities = 327/397 (82%), Positives = 359/397 (90%)
Frame = +3
Query: 153 SKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM 332
+KG A+GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM
Sbjct: 4 AKGTAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM 63
Query: 333 NPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFVVVNDAGRPKVQVEYKGETKSFYPEEVSS 512
NP NTVFDAKRLIGR+F+D VVQSDMK WPF V+N+ G+PKV V YKGE K+FYPEE+SS
Sbjct: 64 NPQNTVFDAKRLIGRKFNDPVVQSDMKLWPFQVINEGGKPKVMVSYKGEKKAFYPEEISS 123
Query: 513 MVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAI 692
MVLTKMKE AEA+LG TVTNAV+TVPAYFNDSQRQATKDAG IAGLNVLRIINEPTAAAI
Sbjct: 124 MVLTKMKETAEAFLGYTVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAI 183
Query: 693 AYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHF 872
AYGLDK ER+VLIFDLGGGTFDVS+LTI+DGIFEVK+TAGDTHLGGEDFDNR+V+HF
Sbjct: 184 AYGLDKAGQGERHVLIFDLGGGTFDVSVLTIDDGIFEVKATAGDTHLGGEDFDNRLVSHF 243
Query: 873 IAEFKGKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRAR 1052
+ EFK KHKKDIS+NKRAVRRLRTACERAKRTLSSSTQA++EIDSLYEGIDFYTSITRAR
Sbjct: 244 VEEFKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQANLEIDSLYEGIDFYTSITRAR 303
Query: 1053 FEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLMGGSTRIPKIQKLLQDFFNGKETE* 1232
FEEL ADLFRGTL+PVEKALRDAK+DK++IHDIVL+GGSTRIPK+Q+LLQD+FNG++
Sbjct: 304 FEELCADLFRGTLEPVEKALRDAKMDKAKIHDIVLVGGSTRIPKVQRLLQDYFNGRDLNK 363
Query: 1233 SIHPDEXXXXXXXXXXXHLSGDKSENVSDLLLLDVTP 1343
SI+PDE L GDKSE V DLLLLDV P
Sbjct: 364 SINPDEAVAYGAAVQAAILMGDKSEKVQDLLLLDVAP 400
Score = 45.8 bits (107), Expect(2) = 0.0
Identities = 24/40 (60%), Positives = 25/40 (62%)
Frame = +2
Query: 1361 TAVGIMTVLIKRNXXXXXXXXXXXXXYSDXQPGVLIQVYE 1480
TA G+MTVLIKRN YSD QPGVLIQVYE
Sbjct: 407 TAGGVMTVLIKRNSTIPTKQTQIFTTYSDNQPGVLIQVYE 446
>ref|NP_776769.1| heat shock-related 70 kDa protein 2 [Bos taurus].
Length = 631
Score = 648 bits (1671), Expect(2) = 0.0
Identities = 333/399 (83%), Positives = 355/399 (88%), Gaps = 2/399 (0%)
Frame = +3
Query: 153 SKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM 332
++GPA+GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIG AAKNQVAM
Sbjct: 3 ARGPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGTAAKNQVAM 62
Query: 333 NPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFVVVNDAGRPKVQVEYKGETKSFYPEEVSS 512
NPTNT+FDAKRLIGR+F+DA VQSDMKHWPF VV++ G+PKVQVEYKGE K+F+PEE+SS
Sbjct: 63 NPTNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYKGEIKTFFPEEISS 122
Query: 513 MVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAI 692
MVLTKMKEIAEAYLG V +AV+TVPAYFNDSQRQATKDAGTI GLNVLRIINEPTAAAI
Sbjct: 123 MVLTKMKEIAEAYLGGKVQSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAAAI 182
Query: 693 AYGLDKK--VGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVN 866
AYGLDKK G E+NVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMV+
Sbjct: 183 AYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVS 242
Query: 867 HFIAEFKGKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITR 1046
H+ EFK KHKKDI A RLRTACERAKRTLSSSTQASIEIDSLYEG+DFYTSITR
Sbjct: 243 HWAEEFKRKHKKDI-----APARLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSITR 297
Query: 1047 ARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLMGGSTRIPKIQKLLQDFFNGKET 1226
ARFEELNADLFR L+PVEKALRDAKLDK QI +IVL+GGSTRIPKIQKLLQDFFNGKE
Sbjct: 298 ARFEELNADLFRVPLEPVEKALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKEL 357
Query: 1227 E*SIHPDEXXXXXXXXXXXHLSGDKSENVSDLLLLDVTP 1343
SI+PDE L GDKSENV DLLLLDVTP
Sbjct: 358 NKSINPDEAVAYGAAVQAAILIGDKSENVQDLLLLDVTP 396
Score = 37.7 bits (86), Expect(2) = 0.0
Identities = 20/40 (50%), Positives = 22/40 (55%)
Frame = +2
Query: 1361 TAVGIMTVLIKRNXXXXXXXXXXXXXYSDXQPGVLIQVYE 1480
TA G+MT LIKRN YSD Q VL+QVYE
Sbjct: 403 TAGGVMTPLIKRNTTIPTKQTQTFTTYSDNQSSVLVQVYE 442
>ref|XP_002685896.1| PREDICTED: heat shock protein 70-like [Bos taurus].
Length = 643
Score = 619 bits (1596), Expect(2) = 0.0
Identities = 306/393 (77%), Positives = 346/393 (88%)
Frame = +3
Query: 165 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTN 344
A+GIDLGTTYSCVGVFQHG+VEI+ANDQGNRTTPSYVAF+DTERL+GDAAK+Q A+NP N
Sbjct: 8 AIGIDLGTTYSCVGVFQHGRVEILANDQGNRTTPSYVAFSDTERLVGDAAKSQAALNPHN 67
Query: 345 TVFDAKRLIGRRFDDAVVQSDMKHWPFVVVNDAGRPKVQVEYKGETKSFYPEEVSSMVLT 524
TVFD KRLIGRRF D VQSDMKHWPF VV++ G+PKV+V Y+GE K+FYPEE+SSMVL+
Sbjct: 68 TVFDVKRLIGRRFTDPSVQSDMKHWPFQVVSEGGKPKVRVSYRGEDKAFYPEEISSMVLS 127
Query: 525 KMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGL 704
KMKE AEAYLG+ V +AV+TVPAYFNDSQRQATKDAG IAGLNVLRIINEPTAAAIAYGL
Sbjct: 128 KMKETAEAYLGQPVKHAVITVPAYFNDSQRQATKDAGAIAGLNVLRIINEPTAAAIAYGL 187
Query: 705 DKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEF 884
D+ ERNVLIFDLGGGTFDVS+LTI+ G+FEVK+TAGDTHLGGEDFDNR+VNHF+ EF
Sbjct: 188 DRLGAGERNVLIFDLGGGTFDVSVLTIDAGVFEVKATAGDTHLGGEDFDNRLVNHFMEEF 247
Query: 885 KGKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEEL 1064
+ KH KD+S NKRA+RRLRTACERAKRTLSSSTQA++EIDSL+EG+DFYTSITRARFEEL
Sbjct: 248 RRKHGKDLSRNKRALRRLRTACERAKRTLSSSTQATLEIDSLFEGVDFYTSITRARFEEL 307
Query: 1065 NADLFRGTLDPVEKALRDAKLDKSQIHDIVLMGGSTRIPKIQKLLQDFFNGKETE*SIHP 1244
+DLFR TL+PVEKALRDAKL K+QIHDIVL+GGSTRIPK+QKLLQDFF+G+E SI+P
Sbjct: 308 CSDLFRSTLEPVEKALRDAKLGKAQIHDIVLVGGSTRIPKVQKLLQDFFDGRELNKSINP 367
Query: 1245 DEXXXXXXXXXXXHLSGDKSENVSDLLLLDVTP 1343
DE L GD E V DLLLLDV P
Sbjct: 368 DEAVAYGAAVQAAVLMGDTCEKVQDLLLLDVAP 400
Score = 42.7 bits (99), Expect(2) = 0.0
Identities = 22/40 (55%), Positives = 24/40 (60%)
Frame = +2
Query: 1361 TAVGIMTVLIKRNXXXXXXXXXXXXXYSDXQPGVLIQVYE 1480
TA G+MT LI+RN YSD QPGVLIQVYE
Sbjct: 407 TAGGVMTTLIQRNATIPTKQTQTFTTYSDNQPGVLIQVYE 446
>ref|XP_589747.1| PREDICTED: heat shock protein 70-like [Bos taurus].
Length = 643
Score = 619 bits (1596), Expect(2) = 0.0
Identities = 306/393 (77%), Positives = 346/393 (88%)
Frame = +3
Query: 165 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTN 344
A+GIDLGTTYSCVGVFQHG+VEI+ANDQGNRTTPSYVAF+DTERL+GDAAK+Q A+NP N
Sbjct: 8 AIGIDLGTTYSCVGVFQHGRVEILANDQGNRTTPSYVAFSDTERLVGDAAKSQAALNPHN 67
Query: 345 TVFDAKRLIGRRFDDAVVQSDMKHWPFVVVNDAGRPKVQVEYKGETKSFYPEEVSSMVLT 524
TVFD KRLIGRRF D VQSDMKHWPF VV++ G+PKV+V Y+GE K+FYPEE+SSMVL+
Sbjct: 68 TVFDVKRLIGRRFTDPSVQSDMKHWPFQVVSEGGKPKVRVSYRGEDKAFYPEEISSMVLS 127
Query: 525 KMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGL 704
KMKE AEAYLG+ V +AV+TVPAYFNDSQRQATKDAG IAGLNVLRIINEPTAAAIAYGL
Sbjct: 128 KMKETAEAYLGQPVKHAVITVPAYFNDSQRQATKDAGAIAGLNVLRIINEPTAAAIAYGL 187
Query: 705 DKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEF 884
D+ ERNVLIFDLGGGTFDVS+LTI+ G+FEVK+TAGDTHLGGEDFDNR+VNHF+ EF
Sbjct: 188 DRLGAGERNVLIFDLGGGTFDVSVLTIDAGVFEVKATAGDTHLGGEDFDNRLVNHFMEEF 247
Query: 885 KGKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEEL 1064
+ KH KD+S NKRA+RRLRTACERAKRTLSSSTQA++EIDSL+EG+DFYTSITRARFEEL
Sbjct: 248 RRKHGKDLSRNKRALRRLRTACERAKRTLSSSTQATLEIDSLFEGVDFYTSITRARFEEL 307
Query: 1065 NADLFRGTLDPVEKALRDAKLDKSQIHDIVLMGGSTRIPKIQKLLQDFFNGKETE*SIHP 1244
+DLFR TL+PVEKALRDAKL K+QIHDIVL+GGSTRIPK+QKLLQDFF+G+E SI+P
Sbjct: 308 CSDLFRSTLEPVEKALRDAKLGKAQIHDIVLVGGSTRIPKVQKLLQDFFDGRELNKSINP 367
Query: 1245 DEXXXXXXXXXXXHLSGDKSENVSDLLLLDVTP 1343
DE L GD E V DLLLLDV P
Sbjct: 368 DEAVAYGAAVQAAVLMGDTCEKVQDLLLLDVAP 400
Score = 42.7 bits (99), Expect(2) = 0.0
Identities = 22/40 (55%), Positives = 24/40 (60%)
Frame = +2
Query: 1361 TAVGIMTVLIKRNXXXXXXXXXXXXXYSDXQPGVLIQVYE 1480
TA G+MT LI+RN YSD QPGVLIQVYE
Sbjct: 407 TAGGVMTTLIQRNATIPTKQTQTFTTYSDNQPGVLIQVYE 446
>ref|NP_001068616.1| 78 kDa glucose-regulated protein precursor [Bos taurus].
Length = 655
Score = 506 bits (1302), Expect(2) = e-145
Identities = 264/397 (66%), Positives = 317/397 (79%), Gaps = 2/397 (0%)
Frame = +3
Query: 159 GPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMN 335
G VGIDLGTTYSCVGVF++G+VEIIANDQGNR TPSYVAFT + ERLIGDAAKNQ+ N
Sbjct: 29 GTVVGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTPEGERLIGDAAKNQLTSN 88
Query: 336 PTNTVFDAKRLIGRRFDDAVVQSDMKHWPFVVVNDAGRPKVQVEYKG-ETKSFYPEEVSS 512
P NTVFDAKRLIGR ++D VQ D+K PF VV +P +QV+ G +TK+F PEE+S+
Sbjct: 89 PENTVFDAKRLIGRTWNDPSVQQDIKFLPFKVVEKKTKPYIQVDVGGGQTKTFAPEEISA 148
Query: 513 MVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAI 692
MVLTKMKE AEAYLGK VT+AVVTVPAYFND+QRQATKDAGTIAGLNV+RIINEPTAAAI
Sbjct: 149 MVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVMRIINEPTAAAI 208
Query: 693 AYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHF 872
AYGLDK+ G E+N+L+FDLGGGTFDVS+LTI++G+FEV +T GDTHLGGEDFD R++ HF
Sbjct: 209 AYGLDKREG-EKNILVFDLGGGTFDVSLLTIDNGVFEVVATNGDTHLGGEDFDQRVMEHF 267
Query: 873 IAEFKGKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRAR 1052
I +K K KD+ ++ RAV++LR E+AKR LSS QA IEI+S YEG DF ++TRA+
Sbjct: 268 IKLYKKKTGKDVRKDNRAVQKLRREVEKAKRALSSQHQARIEIESFYEGEDFSETLTRAK 327
Query: 1053 FEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLMGGSTRIPKIQKLLQDFFNGKETE* 1232
FEELN DLFR T+ PV+K L D+ L KS I +IVL+GGSTRIPKIQ+L+++FFNGKE
Sbjct: 328 FEELNMDLFRSTMKPVQKVLEDSDLKKSDIDEIVLVGGSTRIPKIQQLVKEFFNGKEPSR 387
Query: 1233 SIHPDEXXXXXXXXXXXHLSGDKSENVSDLLLLDVTP 1343
I+PDE LSGD ++ DL+LLDV P
Sbjct: 388 GINPDEAVAYGAAVQAGVLSGD--QDTGDLVLLDVCP 422
Score = 29.6 bits (65), Expect(2) = e-145
Identities = 17/40 (42%), Positives = 19/40 (47%)
Frame = +2
Query: 1361 TAVGIMTVLIKRNXXXXXXXXXXXXXYSDXQPGVLIQVYE 1480
T G+MT LI RN SD QP V I+VYE
Sbjct: 429 TVGGVMTKLIPRNTVVPTKKSQIFSTASDNQPTVTIKVYE 468
>ref|NP_001029696.1| stress-70 protein, mitochondrial precursor [Bos taurus].
Length = 679
Score = 373 bits (958), Expect = e-103
Identities = 209/417 (50%), Positives = 277/417 (66%), Gaps = 5/417 (1%)
Frame = +3
Query: 108 AFFL*LNQAYVSATMSKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT- 284
AF + + Y S + KG VGIDLGTT SCV V + + +++ N +G RTTPS VAFT
Sbjct: 37 AFRIVSRRDYASEAI-KGAVVGIDLGTTNSCVAVMEGKQAKVLENAEGARTTPSVVAFTA 95
Query: 285 DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFVVVNDAGRPKVQV 464
D ERL+G AK Q NP NT + KRLIGRR+DD VQ D+K+ PF +V A V
Sbjct: 96 DGERLVGMPAKRQAVTNPNNTFYATKRLIGRRYDDPEVQKDIKNVPFKIVR-ASNGDAWV 154
Query: 465 EYKGETKSFYPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIA 644
E G K + P ++ + VL KMKE AE YLG T NAV+TVPAYFNDSQRQATKDAG I+
Sbjct: 155 EAHG--KLYSPSQIGAFVLMKMKETAENYLGHTAKNAVITVPAYFNDSQRQATKDAGQIS 212
Query: 645 GLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGD 824
GLNVLR+INEPTAAA+AYGLDK ++ + ++DLGGGTFD+SIL I+ G+FEVKST GD
Sbjct: 213 GLNVLRVINEPTAAALAYGLDK--SEDKIIAVYDLGGGTFDISILEIQKGVFEVKSTNGD 270
Query: 825 THLGGEDFDNRMVNHFIAEFKGKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEID 1004
T LGGEDFD ++ H + EFK + D++++ A++R+R A E+AK LSSS Q I +
Sbjct: 271 TFLGGEDFDQALLRHIVKEFKRETGVDLTKDNMALQRVREAAEKAKCELSSSVQTDINLP 330
Query: 1005 SLYEGID----FYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLMGGST 1172
L +TRA+FE + DL R T+ P +KA++DA++ KS I +++L+GG T
Sbjct: 331 YLTMDASGPKHLNMKLTRAQFEGIVTDLIRRTIAPCQKAMQDAEVSKSDIGEVILVGGMT 390
Query: 1173 RIPKIQKLLQDFFNGKETE*SIHPDEXXXXXXXXXXXHLSGDKSENVSDLLLLDVTP 1343
R+PK+Q+ +QD F G+ +++PDE L+GD V+D+LLLDVTP
Sbjct: 391 RMPKVQQTVQDLF-GRAPSKAVNPDEAVAIGAAIQGGVLAGD----VTDVLLLDVTP 442
>ref|NP_001039853.1| heat shock 70 kDa protein 14 [Bos taurus].
Length = 509
Score = 263 bits (671), Expect = 4e-70
Identities = 139/392 (35%), Positives = 228/392 (58%), Gaps = 2/392 (0%)
Frame = +3
Query: 165 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTN 344
A+G+ LG T +CV V++ G+ +++AND G+R TP+ VA++ E ++G AAK N +N
Sbjct: 3 AIGVHLGCTSACVAVYKDGRADVVANDAGDRVTPAIVAYSKNEEVVGLAAKQSRIRNISN 62
Query: 345 TVFDAKRLIGRRFDDAVVQSDMKHWPFVVVNDAGRPKVQVEYKGETKSFYPEEVSSMVLT 524
TV K+++GR DD + + +V+ G+ +++ E K PE+V+ ++ +
Sbjct: 63 TVMKVKQILGRSSDDPQSRKYITESKCLVIEKNGKLLYEIDTGEEKKFVSPEDVARLIFS 122
Query: 525 KMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGL 704
KMKE A + LG + V+TVP F + Q+ A +A AG NVLR+I+EP+AA +AYG+
Sbjct: 123 KMKETAHSVLGSDANDVVITVPFDFGEKQKSALGEAARAAGFNVLRLIHEPSAALLAYGI 182
Query: 705 --DKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIA 878
D G + N+L+F LGG + +S++ + GI+ V ST D ++GG F + + +
Sbjct: 183 GQDSPTG-KSNILVFKLGGTSLSISVMEVNSGIYRVLSTNTDNNIGGTHFTETLAQYLAS 241
Query: 879 EFKGKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFE 1058
EF+ + D+ N RA+ +L + AK +LS+ A+ +DSLYEG DF +++RARFE
Sbjct: 242 EFQRSFRHDVRGNARAMMKLMNGADTAKHSLSTLGSANCFLDSLYEGQDFDCNVSRARFE 301
Query: 1059 ELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLMGGSTRIPKIQKLLQDFFNGKETE*SI 1238
L + LF ++ + + L + I+ +VL GGS+RIP++Q++++D F E SI
Sbjct: 302 LLCSPLFNKCIEAIREVLEQSGFTADDINKVVLCGGSSRIPRLQQMIRDLFPAVELLNSI 361
Query: 1239 HPDEXXXXXXXXXXXHLSGDKSENVSDLLLLD 1334
PDE L G +S +V D L ++
Sbjct: 362 PPDEVIPIGAAIEAGILIGKESLSVEDALQIE 393
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 49,627,493
Number of extensions: 1281976
Number of successful extensions: 3727
Number of sequences better than 1.0e-05: 18
Number of HSP's gapped: 3696
Number of HSP's successfully gapped: 27
Length of query: 493
Length of database: 17,681,374
Length adjustment: 106
Effective length of query: 387
Effective length of database: 14,174,046
Effective search space: 5485355802
Effective search space used: 5485355802
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-001563
(1480 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_536543.1| PREDICTED: similar to Heat shock cognate 71 kDa... 738 0.0
Alignment gi|XP_859437.1| PREDICTED: similar to heat shock protein 8 isof... 738 0.0
Alignment gi|XP_859398.1| PREDICTED: similar to heat shock 70kDa protein ... 738 0.0
Alignment gi|XP_855655.1| PREDICTED: similar to heat shock 70kDa protein ... 729 0.0
Alignment gi|XP_537479.1| PREDICTED: similar to heat shock protein 2 isof... 672 0.0
Alignment gi|XP_859472.1| PREDICTED: similar to Heat shock cognate 71 kDa... 664 0.0
Alignment gi|XP_848246.1| PREDICTED: similar to Heat shock cognate 71 kDa... 658 0.0
Alignment gi|NP_001003067.1| heat shock 70 kDa protein 1 [Canis lupus fam... 667 0.0
Alignment gi|XP_532082.1| PREDICTED: similar to heat shock 70kDa protein ... 652 0.0
Alignment gi|XP_866274.1| PREDICTED: similar to heat shock protein 2 isof... 629 0.0
>ref|XP_536543.1| PREDICTED: similar to Heat shock cognate 71 kDa protein (Heat shock
70 kDa protein 8) isoform 1 [Canis familiaris].
Length = 646
Score = 738 bits (1904), Expect(2) = 0.0
Identities = 378/398 (94%), Positives = 381/398 (95%)
Frame = +3
Query: 150 MSKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 329
MSKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA
Sbjct: 1 MSKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 60
Query: 330 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFVVVNDAGRPKVQVEYKGETKSFYPEEVS 509
MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPF+VVNDAGRPKVQVEYKGETKSFYPEEVS
Sbjct: 61 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120
Query: 510 SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAA 689
SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAA
Sbjct: 121 SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAA 180
Query: 690 IAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNH 869
IAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNH
Sbjct: 181 IAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNH 240
Query: 870 FIAEFKGKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRA 1049
FIAEFK KHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRA
Sbjct: 241 FIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRA 300
Query: 1050 RFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLMGGSTRIPKIQKLLQDFFNGKETE 1229
RFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVL+GGSTRIPKIQKLLQDFFNGKE
Sbjct: 301 RFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELN 360
Query: 1230 *SIHPDEXXXXXXXXXXXHLSGDKSENVSDLLLLDVTP 1343
SI+PDE LSGDKSENV DLLLLDVTP
Sbjct: 361 KSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTP 398
Score = 45.8 bits (107), Expect(2) = 0.0
Identities = 24/40 (60%), Positives = 25/40 (62%)
Frame = +2
Query: 1361 TAVGIMTVLIKRNXXXXXXXXXXXXXYSDXQPGVLIQVYE 1480
TA G+MTVLIKRN YSD QPGVLIQVYE
Sbjct: 405 TAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYE 444
>ref|XP_859437.1| PREDICTED: similar to heat shock protein 8 isoform 3 [Canis
familiaris].
Length = 586
Score = 738 bits (1904), Expect(2) = 0.0
Identities = 378/398 (94%), Positives = 381/398 (95%)
Frame = +3
Query: 150 MSKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 329
MSKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA
Sbjct: 1 MSKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 60
Query: 330 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFVVVNDAGRPKVQVEYKGETKSFYPEEVS 509
MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPF+VVNDAGRPKVQVEYKGETKSFYPEEVS
Sbjct: 61 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120
Query: 510 SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAA 689
SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAA
Sbjct: 121 SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAA 180
Query: 690 IAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNH 869
IAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNH
Sbjct: 181 IAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNH 240
Query: 870 FIAEFKGKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRA 1049
FIAEFK KHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRA
Sbjct: 241 FIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRA 300
Query: 1050 RFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLMGGSTRIPKIQKLLQDFFNGKETE 1229
RFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVL+GGSTRIPKIQKLLQDFFNGKE
Sbjct: 301 RFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELN 360
Query: 1230 *SIHPDEXXXXXXXXXXXHLSGDKSENVSDLLLLDVTP 1343
SI+PDE LSGDKSENV DLLLLDVTP
Sbjct: 361 KSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTP 398
Score = 45.8 bits (107), Expect(2) = 0.0
Identities = 24/40 (60%), Positives = 25/40 (62%)
Frame = +2
Query: 1361 TAVGIMTVLIKRNXXXXXXXXXXXXXYSDXQPGVLIQVYE 1480
TA G+MTVLIKRN YSD QPGVLIQVYE
Sbjct: 405 TAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYE 444
>ref|XP_859398.1| PREDICTED: similar to heat shock 70kDa protein 8 isoform 2 isoform 2
[Canis familiaris].
Length = 493
Score = 738 bits (1904), Expect(2) = 0.0
Identities = 378/398 (94%), Positives = 381/398 (95%)
Frame = +3
Query: 150 MSKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 329
MSKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA
Sbjct: 1 MSKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 60
Query: 330 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFVVVNDAGRPKVQVEYKGETKSFYPEEVS 509
MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPF+VVNDAGRPKVQVEYKGETKSFYPEEVS
Sbjct: 61 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120
Query: 510 SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAA 689
SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAA
Sbjct: 121 SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAA 180
Query: 690 IAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNH 869
IAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNH
Sbjct: 181 IAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNH 240
Query: 870 FIAEFKGKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRA 1049
FIAEFK KHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRA
Sbjct: 241 FIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRA 300
Query: 1050 RFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLMGGSTRIPKIQKLLQDFFNGKETE 1229
RFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVL+GGSTRIPKIQKLLQDFFNGKE
Sbjct: 301 RFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELN 360
Query: 1230 *SIHPDEXXXXXXXXXXXHLSGDKSENVSDLLLLDVTP 1343
SI+PDE LSGDKSENV DLLLLDVTP
Sbjct: 361 KSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTP 398
Score = 45.8 bits (107), Expect(2) = 0.0
Identities = 24/40 (60%), Positives = 25/40 (62%)
Frame = +2
Query: 1361 TAVGIMTVLIKRNXXXXXXXXXXXXXYSDXQPGVLIQVYE 1480
TA G+MTVLIKRN YSD QPGVLIQVYE
Sbjct: 405 TAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYE 444
>ref|XP_855655.1| PREDICTED: similar to heat shock 70kDa protein 8 isoform 2 isoform 2
[Canis familiaris].
Length = 493
Score = 729 bits (1882), Expect(2) = 0.0
Identities = 375/398 (94%), Positives = 378/398 (94%)
Frame = +3
Query: 150 MSKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 329
MSKGPAVGIDLGTTYSCVGVFQH KVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA
Sbjct: 1 MSKGPAVGIDLGTTYSCVGVFQHRKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 60
Query: 330 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFVVVNDAGRPKVQVEYKGETKSFYPEEVS 509
MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPF+VVNDAGRPKVQVEYKGETKSFYPEEVS
Sbjct: 61 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120
Query: 510 SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAA 689
SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAA
Sbjct: 121 SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAA 180
Query: 690 IAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNH 869
IAYGLDKKVGAERNVLIFDLGGG FDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNH
Sbjct: 181 IAYGLDKKVGAERNVLIFDLGGGIFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNH 240
Query: 870 FIAEFKGKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRA 1049
FIAEFK KHKKDISENKRAVR LRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRA
Sbjct: 241 FIAEFKRKHKKDISENKRAVRCLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRA 300
Query: 1050 RFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLMGGSTRIPKIQKLLQDFFNGKETE 1229
RFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVL+GGSTRIPKIQKLLQDFFNGKE
Sbjct: 301 RFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELN 360
Query: 1230 *SIHPDEXXXXXXXXXXXHLSGDKSENVSDLLLLDVTP 1343
SI+PDE LSGDKSENV DLLLLDVTP
Sbjct: 361 KSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTP 398
Score = 45.8 bits (107), Expect(2) = 0.0
Identities = 24/40 (60%), Positives = 25/40 (62%)
Frame = +2
Query: 1361 TAVGIMTVLIKRNXXXXXXXXXXXXXYSDXQPGVLIQVYE 1480
TA G+MTVLIKRN YSD QPGVLIQVYE
Sbjct: 405 TAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYE 444
>ref|XP_537479.1| PREDICTED: similar to heat shock protein 2 isoform 1 [Canis
familiaris].
Length = 637
Score = 672 bits (1735), Expect(2) = 0.0
Identities = 341/399 (85%), Positives = 362/399 (90%), Gaps = 2/399 (0%)
Frame = +3
Query: 153 SKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM 332
++GPA+GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM
Sbjct: 3 ARGPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM 62
Query: 333 NPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFVVVNDAGRPKVQVEYKGETKSFYPEEVSS 512
NPTNT+FDAKRLIGR+F+DA VQSDMKHWPF VV++ G+PKVQVEYKGE K+F+PEE+SS
Sbjct: 63 NPTNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYKGEMKTFFPEEISS 122
Query: 513 MVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAI 692
MVLTKMKEIAEAYLG V +AV+TVPAYFNDSQRQATKDAGTI GLNVLRIINEPTAAAI
Sbjct: 123 MVLTKMKEIAEAYLGGKVQSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAAAI 182
Query: 693 AYGLDKK--VGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVN 866
AYGLDKK G E+NVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMV+
Sbjct: 183 AYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVS 242
Query: 867 HFIAEFKGKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITR 1046
H EFK KHKKDI NKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEG+DFYTSITR
Sbjct: 243 HLAEEFKRKHKKDIGPNKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSITR 302
Query: 1047 ARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLMGGSTRIPKIQKLLQDFFNGKET 1226
ARFEELNADLFRGTL+PVEKALRDAKLDK QI +IVL+GGSTRIPKIQKLLQDFFNGKE
Sbjct: 303 ARFEELNADLFRGTLEPVEKALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKEL 362
Query: 1227 E*SIHPDEXXXXXXXXXXXHLSGDKSENVSDLLLLDVTP 1343
SI+PDE L GDKSENV DLLLLDVTP
Sbjct: 363 NKSINPDEAVAYGAAVQAAILIGDKSENVQDLLLLDVTP 401
Score = 37.7 bits (86), Expect(2) = 0.0
Identities = 20/40 (50%), Positives = 22/40 (55%)
Frame = +2
Query: 1361 TAVGIMTVLIKRNXXXXXXXXXXXXXYSDXQPGVLIQVYE 1480
TA G+MT LIKRN YSD Q VL+QVYE
Sbjct: 408 TAGGVMTPLIKRNTTIPTKQTQTFTTYSDNQSSVLVQVYE 447
>ref|XP_859472.1| PREDICTED: similar to Heat shock cognate 71 kDa protein (Heat shock
70 kDa protein 8) isoform 4 [Canis familiaris].
Length = 616
Score = 664 bits (1714), Expect(2) = 0.0
Identities = 348/398 (87%), Positives = 351/398 (88%)
Frame = +3
Query: 150 MSKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 329
MSKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA
Sbjct: 1 MSKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 60
Query: 330 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFVVVNDAGRPKVQVEYKGETKSFYPEEVS 509
MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPF+VVNDAGRPKVQVEYKGETKSFYPEEVS
Sbjct: 61 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120
Query: 510 SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAA 689
SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAA
Sbjct: 121 SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAA 180
Query: 690 IAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNH 869
IAY DGIFEVKSTAGDTHLGGEDFDNRMVNH
Sbjct: 181 IAY------------------------------DGIFEVKSTAGDTHLGGEDFDNRMVNH 210
Query: 870 FIAEFKGKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRA 1049
FIAEFK KHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRA
Sbjct: 211 FIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRA 270
Query: 1050 RFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLMGGSTRIPKIQKLLQDFFNGKETE 1229
RFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVL+GGSTRIPKIQKLLQDFFNGKE
Sbjct: 271 RFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELN 330
Query: 1230 *SIHPDEXXXXXXXXXXXHLSGDKSENVSDLLLLDVTP 1343
SI+PDE LSGDKSENV DLLLLDVTP
Sbjct: 331 KSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTP 368
Score = 45.8 bits (107), Expect(2) = 0.0
Identities = 24/40 (60%), Positives = 25/40 (62%)
Frame = +2
Query: 1361 TAVGIMTVLIKRNXXXXXXXXXXXXXYSDXQPGVLIQVYE 1480
TA G+MTVLIKRN YSD QPGVLIQVYE
Sbjct: 375 TAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYE 414
>ref|XP_848246.1| PREDICTED: similar to Heat shock cognate 71 kDa protein (Heat shock
70 kDa protein 8) isoform 1 [Canis familiaris].
Length = 616
Score = 658 bits (1698), Expect(2) = 0.0
Identities = 346/398 (86%), Positives = 349/398 (87%)
Frame = +3
Query: 150 MSKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 329
MSKGPAVGIDLGTTYSCVGVFQH KVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA
Sbjct: 1 MSKGPAVGIDLGTTYSCVGVFQHRKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 60
Query: 330 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFVVVNDAGRPKVQVEYKGETKSFYPEEVS 509
MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPF+VVNDAGRPKVQVEYKGETKSFYPEEVS
Sbjct: 61 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120
Query: 510 SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAA 689
SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAA
Sbjct: 121 SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAA 180
Query: 690 IAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNH 869
IAY DGIFEVKSTAGDTHLGGEDFDNRMVNH
Sbjct: 181 IAY------------------------------DGIFEVKSTAGDTHLGGEDFDNRMVNH 210
Query: 870 FIAEFKGKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRA 1049
FIAEFK KHKKDISENKRAVR LRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRA
Sbjct: 211 FIAEFKRKHKKDISENKRAVRCLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRA 270
Query: 1050 RFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLMGGSTRIPKIQKLLQDFFNGKETE 1229
RFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVL+GGSTRIPKIQKLLQDFFNGKE
Sbjct: 271 RFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELN 330
Query: 1230 *SIHPDEXXXXXXXXXXXHLSGDKSENVSDLLLLDVTP 1343
SI+PDE LSGDKSENV DLLLLDVTP
Sbjct: 331 KSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTP 368
Score = 45.8 bits (107), Expect(2) = 0.0
Identities = 24/40 (60%), Positives = 25/40 (62%)
Frame = +2
Query: 1361 TAVGIMTVLIKRNXXXXXXXXXXXXXYSDXQPGVLIQVYE 1480
TA G+MTVLIKRN YSD QPGVLIQVYE
Sbjct: 375 TAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYE 414
>ref|NP_001003067.1| heat shock 70 kDa protein 1 [Canis lupus familiaris].
Length = 640
Score = 667 bits (1721), Expect(2) = 0.0
Identities = 335/398 (84%), Positives = 360/398 (90%)
Frame = +3
Query: 150 MSKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 329
M+K A+GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA
Sbjct: 1 MAKSAAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 60
Query: 330 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFVVVNDAGRPKVQVEYKGETKSFYPEEVS 509
+NP NTVFDAKRLIGR+F D VVQSDMKHWPF VVND +PKVQV YKGETK+FYPEE+S
Sbjct: 61 LNPQNTVFDAKRLIGRKFGDPVVQSDMKHWPFQVVNDGDKPKVQVSYKGETKAFYPEEIS 120
Query: 510 SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAA 689
SMVLTKMKEIAEAYLG VTNAV+TVPAYFNDSQRQATKDAG IAGLNVLRIINEPTAAA
Sbjct: 121 SMVLTKMKEIAEAYLGYPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAA 180
Query: 690 IAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNH 869
IAYGLD+ ERNVLIFDLGGGTFDVSILTI+DGIFEVK+TAGDTHLGGEDFDNR+VNH
Sbjct: 181 IAYGLDRTGKGERNVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRLVNH 240
Query: 870 FIAEFKGKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRA 1049
F+ EFK KHKKDIS+NKRAVRRLRTACERAKRTLSSSTQAS+EIDSL+EGIDFYTSITRA
Sbjct: 241 FVEEFKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQASLEIDSLFEGIDFYTSITRA 300
Query: 1050 RFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLMGGSTRIPKIQKLLQDFFNGKETE 1229
RFEEL +DLFR TL+PVEKALRDAKLDK+QIHD+VL+GGSTRIPK+QKLLQDFFNG++
Sbjct: 301 RFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDLN 360
Query: 1230 *SIHPDEXXXXXXXXXXXHLSGDKSENVSDLLLLDVTP 1343
SI+PDE L GDKSENV DLLLLDV P
Sbjct: 361 KSINPDEAVAYGAAVQAAILMGDKSENVQDLLLLDVAP 398
Score = 36.2 bits (82), Expect(2) = 0.0
Identities = 21/40 (52%), Positives = 22/40 (55%)
Frame = +2
Query: 1361 TAVGIMTVLIKRNXXXXXXXXXXXXXYSDXQPGVLIQVYE 1480
TA G+MT L RN YSD QPGVLIQVYE
Sbjct: 405 TAGGVMTAL-SRNSTIPTKQTQIFTTYSDNQPGVLIQVYE 443
>ref|XP_532082.1| PREDICTED: similar to heat shock 70kDa protein 1-like isoform 1
[Canis familiaris].
Length = 641
Score = 652 bits (1683), Expect(2) = 0.0
Identities = 327/398 (82%), Positives = 358/398 (89%)
Frame = +3
Query: 150 MSKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 329
++KG A+GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA
Sbjct: 3 VAKGMAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 62
Query: 330 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFVVVNDAGRPKVQVEYKGETKSFYPEEVS 509
MNP NTVFDAKRLIGR+F+D VVQSDMK WPF V+N+ G+PKV V YKGE K+FYPEE+S
Sbjct: 63 MNPQNTVFDAKRLIGRKFNDPVVQSDMKLWPFQVINEGGKPKVMVSYKGEKKAFYPEEIS 122
Query: 510 SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAA 689
SMVLTKMKE AEA+LG VTNAV+TVPAYFNDSQRQATKDAG IAGLNVLRIINEPTAAA
Sbjct: 123 SMVLTKMKETAEAFLGHPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAA 182
Query: 690 IAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNH 869
IAYGLDK ER+VLIFDLGGGTFDVSILTI+DGIFEVK+TAGDTHLGGEDFDNR+V+H
Sbjct: 183 IAYGLDKTGQGERHVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRLVSH 242
Query: 870 FIAEFKGKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRA 1049
F+ EFK KHKKDIS+NKRAVRRLRTACERAKRTLSSSTQA++EIDSLYEGIDFYTSITRA
Sbjct: 243 FVEEFKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQANLEIDSLYEGIDFYTSITRA 302
Query: 1050 RFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLMGGSTRIPKIQKLLQDFFNGKETE 1229
RFEEL ADLFRGTL+PVEKALRDAK+DK +IHDIVL+GGSTRIPK+Q+LLQD+FNG++
Sbjct: 303 RFEELCADLFRGTLEPVEKALRDAKMDKVKIHDIVLVGGSTRIPKVQRLLQDYFNGRDLN 362
Query: 1230 *SIHPDEXXXXXXXXXXXHLSGDKSENVSDLLLLDVTP 1343
SI+PDE L GDKSE V DLLLLDV P
Sbjct: 363 KSINPDEAVAYGAAVQAAILMGDKSEKVQDLLLLDVAP 400
Score = 45.8 bits (107), Expect(2) = 0.0
Identities = 24/40 (60%), Positives = 25/40 (62%)
Frame = +2
Query: 1361 TAVGIMTVLIKRNXXXXXXXXXXXXXYSDXQPGVLIQVYE 1480
TA G+MTVLIKRN YSD QPGVLIQVYE
Sbjct: 407 TAGGVMTVLIKRNSTIPTKQTQIFTTYSDNQPGVLIQVYE 446
>ref|XP_866274.1| PREDICTED: similar to heat shock protein 2 isoform 2 [Canis
familiaris].
Length = 620
Score = 629 bits (1623), Expect(2) = 0.0
Identities = 324/399 (81%), Positives = 345/399 (86%), Gaps = 2/399 (0%)
Frame = +3
Query: 153 SKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM 332
++GPA+GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVA M
Sbjct: 3 ARGPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVA-----------------M 45
Query: 333 NPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFVVVNDAGRPKVQVEYKGETKSFYPEEVSS 512
NPTNT+FDAKRLIGR+F+DA VQSDMKHWPF VV++ G+PKVQVEYKGE K+F+PEE+SS
Sbjct: 46 NPTNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYKGEMKTFFPEEISS 105
Query: 513 MVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAI 692
MVLTKMKEIAEAYLG V +AV+TVPAYFNDSQRQATKDAGTI GLNVLRIINEPTAAAI
Sbjct: 106 MVLTKMKEIAEAYLGGKVQSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAAAI 165
Query: 693 AYGLDKK--VGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVN 866
AYGLDKK G E+NVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMV+
Sbjct: 166 AYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVS 225
Query: 867 HFIAEFKGKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITR 1046
H EFK KHKKDI NKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEG+DFYTSITR
Sbjct: 226 HLAEEFKRKHKKDIGPNKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSITR 285
Query: 1047 ARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLMGGSTRIPKIQKLLQDFFNGKET 1226
ARFEELNADLFRGTL+PVEKALRDAKLDK QI +IVL+GGSTRIPKIQKLLQDFFNGKE
Sbjct: 286 ARFEELNADLFRGTLEPVEKALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKEL 345
Query: 1227 E*SIHPDEXXXXXXXXXXXHLSGDKSENVSDLLLLDVTP 1343
SI+PDE L GDKSENV DLLLLDVTP
Sbjct: 346 NKSINPDEAVAYGAAVQAAILIGDKSENVQDLLLLDVTP 384
Score = 37.7 bits (86), Expect(2) = 0.0
Identities = 20/40 (50%), Positives = 22/40 (55%)
Frame = +2
Query: 1361 TAVGIMTVLIKRNXXXXXXXXXXXXXYSDXQPGVLIQVYE 1480
TA G+MT LIKRN YSD Q VL+QVYE
Sbjct: 391 TAGGVMTPLIKRNTTIPTKQTQTFTTYSDNQSSVLVQVYE 430
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 51,940,734
Number of extensions: 1322983
Number of successful extensions: 4008
Number of sequences better than 1.0e-05: 55
Number of HSP's gapped: 3859
Number of HSP's successfully gapped: 86
Length of query: 493
Length of database: 18,874,504
Length adjustment: 107
Effective length of query: 386
Effective length of database: 15,307,552
Effective search space: 5908715072
Effective search space used: 5908715072
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-001563
(1480 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_006588.1| heat shock cognate 71 kDa protein isoform 1 [Ho... 738 0.0
Alignment gi|NP_694881.1| heat shock cognate 71 kDa protein isoform 2 [Ho... 738 0.0
Alignment gi|NP_068814.2| heat shock-related 70 kDa protein 2 [Homo sapie... 674 0.0
Alignment gi|NP_005336.3| heat shock 70 kDa protein 1A/1B [Homo sapiens]. 667 0.0
Alignment gi|NP_005337.2| heat shock 70 kDa protein 1A/1B [Homo sapiens]. 667 0.0
Alignment gi|NP_005518.3| heat shock 70 kDa protein 1-like [Homo sapiens]. 650 0.0
Alignment gi|NP_002146.2| heat shock 70 kDa protein 6 [Homo sapiens]. 624 0.0
Alignment gi|NP_005338.1| 78 kDa glucose-regulated protein precursor [Hom... 507 e-145
Alignment gi|NP_004125.3| stress-70 protein, mitochondrial precursor [Hom... 374 e-103
Alignment gi|NP_057383.2| heat shock 70 kDa protein 14 isoform 1 [Homo sa... 264 1e-70
>ref|NP_006588.1| heat shock cognate 71 kDa protein isoform 1 [Homo sapiens].
Length = 646
Score = 738 bits (1904), Expect(2) = 0.0
Identities = 378/398 (94%), Positives = 381/398 (95%)
Frame = +3
Query: 150 MSKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 329
MSKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA
Sbjct: 1 MSKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 60
Query: 330 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFVVVNDAGRPKVQVEYKGETKSFYPEEVS 509
MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPF+VVNDAGRPKVQVEYKGETKSFYPEEVS
Sbjct: 61 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120
Query: 510 SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAA 689
SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAA
Sbjct: 121 SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAA 180
Query: 690 IAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNH 869
IAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNH
Sbjct: 181 IAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNH 240
Query: 870 FIAEFKGKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRA 1049
FIAEFK KHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRA
Sbjct: 241 FIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRA 300
Query: 1050 RFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLMGGSTRIPKIQKLLQDFFNGKETE 1229
RFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVL+GGSTRIPKIQKLLQDFFNGKE
Sbjct: 301 RFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELN 360
Query: 1230 *SIHPDEXXXXXXXXXXXHLSGDKSENVSDLLLLDVTP 1343
SI+PDE LSGDKSENV DLLLLDVTP
Sbjct: 361 KSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTP 398
Score = 45.8 bits (107), Expect(2) = 0.0
Identities = 24/40 (60%), Positives = 25/40 (62%)
Frame = +2
Query: 1361 TAVGIMTVLIKRNXXXXXXXXXXXXXYSDXQPGVLIQVYE 1480
TA G+MTVLIKRN YSD QPGVLIQVYE
Sbjct: 405 TAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYE 444
>ref|NP_694881.1| heat shock cognate 71 kDa protein isoform 2 [Homo sapiens].
Length = 493
Score = 738 bits (1904), Expect(2) = 0.0
Identities = 378/398 (94%), Positives = 381/398 (95%)
Frame = +3
Query: 150 MSKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 329
MSKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA
Sbjct: 1 MSKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 60
Query: 330 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFVVVNDAGRPKVQVEYKGETKSFYPEEVS 509
MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPF+VVNDAGRPKVQVEYKGETKSFYPEEVS
Sbjct: 61 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120
Query: 510 SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAA 689
SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAA
Sbjct: 121 SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAA 180
Query: 690 IAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNH 869
IAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNH
Sbjct: 181 IAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNH 240
Query: 870 FIAEFKGKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRA 1049
FIAEFK KHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRA
Sbjct: 241 FIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRA 300
Query: 1050 RFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLMGGSTRIPKIQKLLQDFFNGKETE 1229
RFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVL+GGSTRIPKIQKLLQDFFNGKE
Sbjct: 301 RFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELN 360
Query: 1230 *SIHPDEXXXXXXXXXXXHLSGDKSENVSDLLLLDVTP 1343
SI+PDE LSGDKSENV DLLLLDVTP
Sbjct: 361 KSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTP 398
Score = 45.8 bits (107), Expect(2) = 0.0
Identities = 24/40 (60%), Positives = 25/40 (62%)
Frame = +2
Query: 1361 TAVGIMTVLIKRNXXXXXXXXXXXXXYSDXQPGVLIQVYE 1480
TA G+MTVLIKRN YSD QPGVLIQVYE
Sbjct: 405 TAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYE 444
>ref|NP_068814.2| heat shock-related 70 kDa protein 2 [Homo sapiens].
Length = 639
Score = 674 bits (1740), Expect(2) = 0.0
Identities = 342/399 (85%), Positives = 363/399 (90%), Gaps = 2/399 (0%)
Frame = +3
Query: 153 SKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM 332
++GPA+GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM
Sbjct: 3 ARGPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM 62
Query: 333 NPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFVVVNDAGRPKVQVEYKGETKSFYPEEVSS 512
NPTNT+FDAKRLIGR+F+DA VQSDMKHWPF VV++ G+PKVQVEYKGETK+F+PEE+SS
Sbjct: 63 NPTNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYKGETKTFFPEEISS 122
Query: 513 MVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAI 692
MVLTKMKEIAEAYLG V +AV+TVPAYFNDSQRQATKDAGTI GLNVLRIINEPTAAAI
Sbjct: 123 MVLTKMKEIAEAYLGGKVHSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAAAI 182
Query: 693 AYGLDKK--VGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVN 866
AYGLDKK G E+NVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMV+
Sbjct: 183 AYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVS 242
Query: 867 HFIAEFKGKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITR 1046
H EFK KHKKDI NKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEG+DFYTSITR
Sbjct: 243 HLAEEFKRKHKKDIGPNKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSITR 302
Query: 1047 ARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLMGGSTRIPKIQKLLQDFFNGKET 1226
ARFEELNADLFRGTL+PVEKALRDAKLDK QI +IVL+GGSTRIPKIQKLLQDFFNGKE
Sbjct: 303 ARFEELNADLFRGTLEPVEKALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKEL 362
Query: 1227 E*SIHPDEXXXXXXXXXXXHLSGDKSENVSDLLLLDVTP 1343
SI+PDE L GDKSENV DLLLLDVTP
Sbjct: 363 NKSINPDEAVAYGAAVQAAILIGDKSENVQDLLLLDVTP 401
Score = 37.7 bits (86), Expect(2) = 0.0
Identities = 20/40 (50%), Positives = 22/40 (55%)
Frame = +2
Query: 1361 TAVGIMTVLIKRNXXXXXXXXXXXXXYSDXQPGVLIQVYE 1480
TA G+MT LIKRN YSD Q VL+QVYE
Sbjct: 408 TAGGVMTPLIKRNTTIPTKQTQTFTTYSDNQSSVLVQVYE 447
>ref|NP_005336.3| heat shock 70 kDa protein 1A/1B [Homo sapiens].
Length = 641
Score = 667 bits (1720), Expect(2) = 0.0
Identities = 334/398 (83%), Positives = 360/398 (90%)
Frame = +3
Query: 150 MSKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 329
M+K A+GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA
Sbjct: 1 MAKAAAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 60
Query: 330 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFVVVNDAGRPKVQVEYKGETKSFYPEEVS 509
+NP NTVFDAKRLIGR+F D VVQSDMKHWPF V+ND +PKVQV YKGETK+FYPEE+S
Sbjct: 61 LNPQNTVFDAKRLIGRKFGDPVVQSDMKHWPFQVINDGDKPKVQVSYKGETKAFYPEEIS 120
Query: 510 SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAA 689
SMVLTKMKEIAEAYLG VTNAV+TVPAYFNDSQRQATKDAG IAGLNVLRIINEPTAAA
Sbjct: 121 SMVLTKMKEIAEAYLGYPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAA 180
Query: 690 IAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNH 869
IAYGLD+ ERNVLIFDLGGGTFDVSILTI+DGIFEVK+TAGDTHLGGEDFDNR+VNH
Sbjct: 181 IAYGLDRTGKGERNVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRLVNH 240
Query: 870 FIAEFKGKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRA 1049
F+ EFK KHKKDIS+NKRAVRRLRTACERAKRTLSSSTQAS+EIDSL+EGIDFYTSITRA
Sbjct: 241 FVEEFKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQASLEIDSLFEGIDFYTSITRA 300
Query: 1050 RFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLMGGSTRIPKIQKLLQDFFNGKETE 1229
RFEEL +DLFR TL+PVEKALRDAKLDK+QIHD+VL+GGSTRIPK+QKLLQDFFNG++
Sbjct: 301 RFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDLN 360
Query: 1230 *SIHPDEXXXXXXXXXXXHLSGDKSENVSDLLLLDVTP 1343
SI+PDE L GDKSENV DLLLLDV P
Sbjct: 361 KSINPDEAVAYGAAVQAAILMGDKSENVQDLLLLDVAP 398
Score = 44.3 bits (103), Expect(2) = 0.0
Identities = 23/40 (57%), Positives = 24/40 (60%)
Frame = +2
Query: 1361 TAVGIMTVLIKRNXXXXXXXXXXXXXYSDXQPGVLIQVYE 1480
TA G+MT LIKRN YSD QPGVLIQVYE
Sbjct: 405 TAGGVMTALIKRNSTIPTKQTQIFTTYSDNQPGVLIQVYE 444
>ref|NP_005337.2| heat shock 70 kDa protein 1A/1B [Homo sapiens].
Length = 641
Score = 667 bits (1720), Expect(2) = 0.0
Identities = 334/398 (83%), Positives = 360/398 (90%)
Frame = +3
Query: 150 MSKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 329
M+K A+GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA
Sbjct: 1 MAKAAAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 60
Query: 330 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFVVVNDAGRPKVQVEYKGETKSFYPEEVS 509
+NP NTVFDAKRLIGR+F D VVQSDMKHWPF V+ND +PKVQV YKGETK+FYPEE+S
Sbjct: 61 LNPQNTVFDAKRLIGRKFGDPVVQSDMKHWPFQVINDGDKPKVQVSYKGETKAFYPEEIS 120
Query: 510 SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAA 689
SMVLTKMKEIAEAYLG VTNAV+TVPAYFNDSQRQATKDAG IAGLNVLRIINEPTAAA
Sbjct: 121 SMVLTKMKEIAEAYLGYPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAA 180
Query: 690 IAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNH 869
IAYGLD+ ERNVLIFDLGGGTFDVSILTI+DGIFEVK+TAGDTHLGGEDFDNR+VNH
Sbjct: 181 IAYGLDRTGKGERNVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRLVNH 240
Query: 870 FIAEFKGKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRA 1049
F+ EFK KHKKDIS+NKRAVRRLRTACERAKRTLSSSTQAS+EIDSL+EGIDFYTSITRA
Sbjct: 241 FVEEFKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQASLEIDSLFEGIDFYTSITRA 300
Query: 1050 RFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLMGGSTRIPKIQKLLQDFFNGKETE 1229
RFEEL +DLFR TL+PVEKALRDAKLDK+QIHD+VL+GGSTRIPK+QKLLQDFFNG++
Sbjct: 301 RFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDLN 360
Query: 1230 *SIHPDEXXXXXXXXXXXHLSGDKSENVSDLLLLDVTP 1343
SI+PDE L GDKSENV DLLLLDV P
Sbjct: 361 KSINPDEAVAYGAAVQAAILMGDKSENVQDLLLLDVAP 398
Score = 44.3 bits (103), Expect(2) = 0.0
Identities = 23/40 (57%), Positives = 24/40 (60%)
Frame = +2
Query: 1361 TAVGIMTVLIKRNXXXXXXXXXXXXXYSDXQPGVLIQVYE 1480
TA G+MT LIKRN YSD QPGVLIQVYE
Sbjct: 405 TAGGVMTALIKRNSTIPTKQTQIFTTYSDNQPGVLIQVYE 444
>ref|NP_005518.3| heat shock 70 kDa protein 1-like [Homo sapiens].
Length = 641
Score = 650 bits (1676), Expect(2) = 0.0
Identities = 325/397 (81%), Positives = 358/397 (90%)
Frame = +3
Query: 153 SKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM 332
+KG A+GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM
Sbjct: 4 AKGIAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM 63
Query: 333 NPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFVVVNDAGRPKVQVEYKGETKSFYPEEVSS 512
NP NTVFDAKRLIGR+F+D VVQ+DMK WPF V+N+ G+PKV V YKGE K+FYPEE+SS
Sbjct: 64 NPQNTVFDAKRLIGRKFNDPVVQADMKLWPFQVINEGGKPKVLVSYKGENKAFYPEEISS 123
Query: 513 MVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAI 692
MVLTK+KE AEA+LG VTNAV+TVPAYFNDSQRQATKDAG IAGLNVLRIINEPTAAAI
Sbjct: 124 MVLTKLKETAEAFLGHPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAI 183
Query: 693 AYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHF 872
AYGLDK ER+VLIFDLGGGTFDVSILTI+DGIFEVK+TAGDTHLGGEDFDNR+V+HF
Sbjct: 184 AYGLDKGGQGERHVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRLVSHF 243
Query: 873 IAEFKGKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRAR 1052
+ EFK KHKKDIS+NKRAVRRLRTACERAKRTLSSSTQA++EIDSLYEGIDFYTSITRAR
Sbjct: 244 VEEFKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQANLEIDSLYEGIDFYTSITRAR 303
Query: 1053 FEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLMGGSTRIPKIQKLLQDFFNGKETE* 1232
FEEL ADLFRGTL+PVEKALRDAK+DK++IHDIVL+GGSTRIPK+Q+LLQD+FNG++
Sbjct: 304 FEELCADLFRGTLEPVEKALRDAKMDKAKIHDIVLVGGSTRIPKVQRLLQDYFNGRDLNK 363
Query: 1233 SIHPDEXXXXXXXXXXXHLSGDKSENVSDLLLLDVTP 1343
SI+PDE L GDKSE V DLLLLDV P
Sbjct: 364 SINPDEAVAYGAAVQAAILMGDKSEKVQDLLLLDVAP 400
Score = 44.3 bits (103), Expect(2) = 0.0
Identities = 23/40 (57%), Positives = 24/40 (60%)
Frame = +2
Query: 1361 TAVGIMTVLIKRNXXXXXXXXXXXXXYSDXQPGVLIQVYE 1480
TA G+MT LIKRN YSD QPGVLIQVYE
Sbjct: 407 TAGGVMTALIKRNSTIPTKQTQIFTTYSDNQPGVLIQVYE 446
>ref|NP_002146.2| heat shock 70 kDa protein 6 [Homo sapiens].
Length = 643
Score = 624 bits (1609), Expect(2) = 0.0
Identities = 309/393 (78%), Positives = 349/393 (88%)
Frame = +3
Query: 165 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTN 344
AVGIDLGTTYSCVGVFQ G+VEI+ANDQGNRTTPSYVAFTDTERL+GDAAK+Q A+NP N
Sbjct: 8 AVGIDLGTTYSCVGVFQQGRVEILANDQGNRTTPSYVAFTDTERLVGDAAKSQAALNPHN 67
Query: 345 TVFDAKRLIGRRFDDAVVQSDMKHWPFVVVNDAGRPKVQVEYKGETKSFYPEEVSSMVLT 524
TVFDAKRLIGR+F D VQSDMKHWPF VV++ G+PKV+V Y+GE K+FYPEE+SSMVL+
Sbjct: 68 TVFDAKRLIGRKFADTTVQSDMKHWPFRVVSEGGKPKVRVCYRGEDKTFYPEEISSMVLS 127
Query: 525 KMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGL 704
KMKE AEAYLG+ V +AV+TVPAYFNDSQRQATKDAG IAGLNVLRIINEPTAAAIAYGL
Sbjct: 128 KMKETAEAYLGQPVKHAVITVPAYFNDSQRQATKDAGAIAGLNVLRIINEPTAAAIAYGL 187
Query: 705 DKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEF 884
D++ ERNVLIFDLGGGTFDVS+L+I+ G+FEVK+TAGDTHLGGEDFDNR+VNHF+ EF
Sbjct: 188 DRRGAGERNVLIFDLGGGTFDVSVLSIDAGVFEVKATAGDTHLGGEDFDNRLVNHFMEEF 247
Query: 885 KGKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEEL 1064
+ KH KD+S NKRA+RRLRTACERAKRTLSSSTQA++EIDSL+EG+DFYTSITRARFEEL
Sbjct: 248 RRKHGKDLSGNKRALRRLRTACERAKRTLSSSTQATLEIDSLFEGVDFYTSITRARFEEL 307
Query: 1065 NADLFRGTLDPVEKALRDAKLDKSQIHDIVLMGGSTRIPKIQKLLQDFFNGKETE*SIHP 1244
+DLFR TL+PVEKALRDAKLDK+QIHD+VL+GGSTRIPK+QKLLQDFFNGKE SI+P
Sbjct: 308 CSDLFRSTLEPVEKALRDAKLDKAQIHDVVLVGGSTRIPKVQKLLQDFFNGKELNKSINP 367
Query: 1245 DEXXXXXXXXXXXHLSGDKSENVSDLLLLDVTP 1343
DE L GDK E V DLLLLDV P
Sbjct: 368 DEAVAYGAAVQAAVLMGDKCEKVQDLLLLDVAP 400
Score = 41.2 bits (95), Expect(2) = 0.0
Identities = 21/40 (52%), Positives = 23/40 (57%)
Frame = +2
Query: 1361 TAVGIMTVLIKRNXXXXXXXXXXXXXYSDXQPGVLIQVYE 1480
TA G+MT LI+RN YSD QPGV IQVYE
Sbjct: 407 TAGGVMTTLIQRNATIPTKQTQTFTTYSDNQPGVFIQVYE 446
>ref|NP_005338.1| 78 kDa glucose-regulated protein precursor [Homo sapiens].
Length = 654
Score = 507 bits (1306), Expect(2) = e-145
Identities = 271/419 (64%), Positives = 325/419 (77%), Gaps = 5/419 (1%)
Frame = +3
Query: 102 VAAFFL*LNQAYVSATMSK---GPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSY 272
VAA L L+ A K G VGIDLGTTYSCVGVF++G+VEIIANDQGNR TPSY
Sbjct: 6 VAAMLLLLSAARAEEEDKKEDVGTVVGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSY 65
Query: 273 VAFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFVVVNDAGR 449
VAFT + ERLIGDAAKNQ+ NP NTVFDAKRLIGR ++D VQ D+K PF VV +
Sbjct: 66 VAFTPEGERLIGDAAKNQLTSNPENTVFDAKRLIGRTWNDPSVQQDIKFLPFKVVEKKTK 125
Query: 450 PKVQVEYKG-ETKSFYPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATK 626
P +QV+ G +TK+F PEE+S+MVLTKMKE AEAYLGK VT+AVVTVPAYFND+QRQATK
Sbjct: 126 PYIQVDIGGGQTKTFAPEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATK 185
Query: 627 DAGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEV 806
DAGTIAGLNV+RIINEPTAAAIAYGLDK+ G E+N+L+FDLGGGTFDVS+LTI++G+FEV
Sbjct: 186 DAGTIAGLNVMRIINEPTAAAIAYGLDKREG-EKNILVFDLGGGTFDVSLLTIDNGVFEV 244
Query: 807 KSTAGDTHLGGEDFDNRMVNHFIAEFKGKHKKDISENKRAVRRLRTACERAKRTLSSSTQ 986
+T GDTHLGGEDFD R++ HFI +K K KD+ ++ RAV++LR E+AKR LSS Q
Sbjct: 245 VATNGDTHLGGEDFDQRVMEHFIKLYKKKTGKDVRKDNRAVQKLRREVEKAKRALSSQHQ 304
Query: 987 ASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLMGG 1166
A IEI+S YEG DF ++TRA+FEELN DLFR T+ PV+K L D+ L KS I +IVL+GG
Sbjct: 305 ARIEIESFYEGEDFSETLTRAKFEELNMDLFRSTMKPVQKVLEDSDLKKSDIDEIVLVGG 364
Query: 1167 STRIPKIQKLLQDFFNGKETE*SIHPDEXXXXXXXXXXXHLSGDKSENVSDLLLLDVTP 1343
STRIPKIQ+L+++FFNGKE I+PDE LSGD ++ DL+LLDV P
Sbjct: 365 STRIPKIQQLVKEFFNGKEPSRGINPDEAVAYGAAVQAGVLSGD--QDTGDLVLLDVCP 421
Score = 29.6 bits (65), Expect(2) = e-145
Identities = 17/40 (42%), Positives = 19/40 (47%)
Frame = +2
Query: 1361 TAVGIMTVLIKRNXXXXXXXXXXXXXYSDXQPGVLIQVYE 1480
T G+MT LI RN SD QP V I+VYE
Sbjct: 428 TVGGVMTKLIPRNTVVPTKKSQIFSTASDNQPTVTIKVYE 467
>ref|NP_004125.3| stress-70 protein, mitochondrial precursor [Homo sapiens].
Length = 679
Score = 374 bits (959), Expect = e-103
Identities = 210/417 (50%), Positives = 277/417 (66%), Gaps = 5/417 (1%)
Frame = +3
Query: 108 AFFL*LNQAYVSATMSKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT- 284
AF L + Y S + KG VGIDLGTT SCV V + + +++ N +G RTTPS VAFT
Sbjct: 37 AFRLVSRRDYASEAI-KGAVVGIDLGTTNSCVAVMEGKQAKVLENAEGARTTPSVVAFTA 95
Query: 285 DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFVVVNDAGRPKVQV 464
D ERL+G AK Q NP NT + KRLIGRR+DD VQ D+K+ PF +V A V
Sbjct: 96 DGERLVGMPAKRQAVTNPNNTFYATKRLIGRRYDDPEVQKDIKNVPFKIVR-ASNGDAWV 154
Query: 465 EYKGETKSFYPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIA 644
E G K + P ++ + VL KMKE AE YLG T NAV+TVPAYFNDSQRQATKDAG I+
Sbjct: 155 EAHG--KLYSPSQIGAFVLMKMKETAENYLGHTAKNAVITVPAYFNDSQRQATKDAGQIS 212
Query: 645 GLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGD 824
GLNVLR+INEPTAAA+AYGLDK ++ + ++DLGGGTFD+SIL I+ G+FEVKST GD
Sbjct: 213 GLNVLRVINEPTAAALAYGLDK--SEDKVIAVYDLGGGTFDISILEIQKGVFEVKSTNGD 270
Query: 825 THLGGEDFDNRMVNHFIAEFKGKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEID 1004
T LGGEDFD ++ H + EFK + D++++ A++R+R A E+AK LSSS Q I +
Sbjct: 271 TFLGGEDFDQALLRHIVKEFKRETGVDLTKDNMALQRVREAAEKAKCELSSSVQTDINLP 330
Query: 1005 SLYEGID----FYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLMGGST 1172
L +TRA+FE + DL R T+ P +KA++DA++ KS I +++L+GG T
Sbjct: 331 YLTMDSSGPKHLNMKLTRAQFEGIVTDLIRRTIAPCQKAMQDAEVSKSDIGEVILVGGMT 390
Query: 1173 RIPKIQKLLQDFFNGKETE*SIHPDEXXXXXXXXXXXHLSGDKSENVSDLLLLDVTP 1343
R+PK+Q+ +QD F G+ +++PDE L+GD V+D+LLLDVTP
Sbjct: 391 RMPKVQQTVQDLF-GRAPSKAVNPDEAVAIGAAIQGGVLAGD----VTDVLLLDVTP 442
>ref|NP_057383.2| heat shock 70 kDa protein 14 isoform 1 [Homo sapiens].
Length = 509
Score = 264 bits (675), Expect = 1e-70
Identities = 143/392 (36%), Positives = 228/392 (58%), Gaps = 2/392 (0%)
Frame = +3
Query: 165 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTN 344
A+G+ LG T +CV V++ G+ ++AND G+R TP+ VA+++ E ++G AAK N +N
Sbjct: 3 AIGVHLGCTSACVAVYKDGRAGVVANDAGDRVTPAVVAYSENEEIVGLAAKQSRIRNISN 62
Query: 345 TVFDAKRLIGRRFDDAVVQSDMKHWPFVVVNDAGRPKVQVEYKGETKSFYPEEVSSMVLT 524
TV K+++GR D Q + +V+ G+ + +++ ETK PE+V+ ++ +
Sbjct: 63 TVMKVKQILGRSSSDPQAQKYIAESKCLVIEKNGKLRYEIDTGEETKFVNPEDVARLIFS 122
Query: 525 KMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGL 704
KMKE A + LG + V+TVP F + Q+ A +A AG NVLR+I+EP+AA +AYG+
Sbjct: 123 KMKETAHSVLGSDANDVVITVPFDFGEKQKNALGEAARAAGFNVLRLIHEPSAALLAYGI 182
Query: 705 --DKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIA 878
D G + N+L+F LGG + +S++ + GI+ V ST D ++GG F + + +
Sbjct: 183 GQDSPTG-KSNILVFKLGGTSLSLSVMEVNSGIYRVLSTNTDDNIGGAHFTETLAQYLAS 241
Query: 879 EFKGKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFE 1058
EF+ K D+ N RA+ +L + E AK +LS+ A+ +DSLYEG DF +++RARFE
Sbjct: 242 EFQRSFKHDVRGNARAMMKLTNSAEVAKHSLSTLGSANCFLDSLYEGQDFDCNVSRARFE 301
Query: 1059 ELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLMGGSTRIPKIQKLLQDFFNGKETE*SI 1238
L + LF ++ + L I+ +VL GGS+RIPK+Q+L++D F E SI
Sbjct: 302 LLCSPLFNKCIEAIRGLLDQNGFTADDINKVVLCGGSSRIPKLQQLIKDLFPAVELLNSI 361
Query: 1239 HPDEXXXXXXXXXXXHLSGDKSENVSDLLLLD 1334
PDE L G ++ V D L+++
Sbjct: 362 PPDEVIPIGAAIEAGILIGKENLLVEDSLMIE 393
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 51,129,266
Number of extensions: 1325998
Number of successful extensions: 3644
Number of sequences better than 1.0e-05: 16
Number of HSP's gapped: 3612
Number of HSP's successfully gapped: 25
Length of query: 493
Length of database: 18,297,164
Length adjustment: 107
Effective length of query: 386
Effective length of database: 14,770,016
Effective search space: 5701226176
Effective search space used: 5701226176
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-001563
(1480 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_112442.2| heat shock cognate 71 kDa protein [Mus musculus]. 738 0.0
Alignment gi|NP_034608.2| heat shock 70 kDa protein 1B [Mus musculus]. 666 0.0
Alignment gi|NP_034609.2| heat shock 70 kDa protein 1A [Mus musculus]. 666 0.0
Alignment gi|NP_001002012.1| heat shock-related 70 kDa protein 2 [Mus mus... 672 0.0
Alignment gi|NP_032327.2| heat shock-related 70 kDa protein 2 [Mus muscul... 672 0.0
Alignment gi|NP_038586.2| heat shock 70 kDa protein 1-like [Mus musculus]. 655 0.0
Alignment gi|NP_001156906.1| 78 kDa glucose-regulated protein precursor [... 504 e-145
Alignment gi|NP_071705.3| 78 kDa glucose-regulated protein precursor [Mus... 504 e-145
Alignment gi|NP_034611.2| stress-70 protein, mitochondrial [Mus musculus]. 371 e-103
Alignment gi|NP_056580.2| heat shock 70 kDa protein 14 isoform 1 [Mus mus... 259 3e-69
>ref|NP_112442.2| heat shock cognate 71 kDa protein [Mus musculus].
Length = 646
Score = 738 bits (1904), Expect(2) = 0.0
Identities = 378/398 (94%), Positives = 381/398 (95%)
Frame = +3
Query: 150 MSKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 329
MSKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA
Sbjct: 1 MSKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 60
Query: 330 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFVVVNDAGRPKVQVEYKGETKSFYPEEVS 509
MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPF+VVNDAGRPKVQVEYKGETKSFYPEEVS
Sbjct: 61 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120
Query: 510 SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAA 689
SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAA
Sbjct: 121 SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAA 180
Query: 690 IAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNH 869
IAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNH
Sbjct: 181 IAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNH 240
Query: 870 FIAEFKGKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRA 1049
FIAEFK KHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRA
Sbjct: 241 FIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRA 300
Query: 1050 RFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLMGGSTRIPKIQKLLQDFFNGKETE 1229
RFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVL+GGSTRIPKIQKLLQDFFNGKE
Sbjct: 301 RFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELN 360
Query: 1230 *SIHPDEXXXXXXXXXXXHLSGDKSENVSDLLLLDVTP 1343
SI+PDE LSGDKSENV DLLLLDVTP
Sbjct: 361 KSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTP 398
Score = 45.8 bits (107), Expect(2) = 0.0
Identities = 24/40 (60%), Positives = 25/40 (62%)
Frame = +2
Query: 1361 TAVGIMTVLIKRNXXXXXXXXXXXXXYSDXQPGVLIQVYE 1480
TA G+MTVLIKRN YSD QPGVLIQVYE
Sbjct: 405 TAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYE 444
>ref|NP_034608.2| heat shock 70 kDa protein 1B [Mus musculus].
Length = 642
Score = 666 bits (1718), Expect(2) = 0.0
Identities = 333/398 (83%), Positives = 362/398 (90%)
Frame = +3
Query: 150 MSKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 329
M+K A+GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA
Sbjct: 1 MAKNTAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 60
Query: 330 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFVVVNDAGRPKVQVEYKGETKSFYPEEVS 509
+NP NTVFDAKRLIGR+F DAVVQSDMKHWPF VVND +PKVQV YKGE++SF+PEE+S
Sbjct: 61 LNPQNTVFDAKRLIGRKFGDAVVQSDMKHWPFQVVNDGDKPKVQVNYKGESRSFFPEEIS 120
Query: 510 SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAA 689
SMVLTKMKEIAEAYLG VTNAV+TVPAYFNDSQRQATKDAG IAGLNVLRIINEPTAAA
Sbjct: 121 SMVLTKMKEIAEAYLGHPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAA 180
Query: 690 IAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNH 869
IAYGLD+ ERNVLIFDLGGGTFDVSILTI+DGIFEVK+TAGDTHLGGEDFDNR+V+H
Sbjct: 181 IAYGLDRTGKGERNVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRLVSH 240
Query: 870 FIAEFKGKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRA 1049
F+ EFK KHKKDIS+NKRAVRRLRTACERAKRTLSSSTQAS+EIDSL+EGIDFYTSITRA
Sbjct: 241 FVEEFKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQASLEIDSLFEGIDFYTSITRA 300
Query: 1050 RFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLMGGSTRIPKIQKLLQDFFNGKETE 1229
RFEEL +DLFRGTL+PVEKALRDAK+DK+QIHD+VL+GGSTRIPK+QKLLQDFFNG++
Sbjct: 301 RFEELCSDLFRGTLEPVEKALRDAKMDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDLN 360
Query: 1230 *SIHPDEXXXXXXXXXXXHLSGDKSENVSDLLLLDVTP 1343
SI+PDE L GDKSENV DLLLLDV P
Sbjct: 361 KSINPDEAVAYGAAVQAAILMGDKSENVQDLLLLDVAP 398
Score = 44.3 bits (103), Expect(2) = 0.0
Identities = 23/40 (57%), Positives = 24/40 (60%)
Frame = +2
Query: 1361 TAVGIMTVLIKRNXXXXXXXXXXXXXYSDXQPGVLIQVYE 1480
TA G+MT LIKRN YSD QPGVLIQVYE
Sbjct: 405 TAGGVMTALIKRNSTIPTKQTQTFTTYSDNQPGVLIQVYE 444
>ref|NP_034609.2| heat shock 70 kDa protein 1A [Mus musculus].
Length = 641
Score = 666 bits (1718), Expect(2) = 0.0
Identities = 333/398 (83%), Positives = 362/398 (90%)
Frame = +3
Query: 150 MSKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 329
M+K A+GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA
Sbjct: 1 MAKNTAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 60
Query: 330 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFVVVNDAGRPKVQVEYKGETKSFYPEEVS 509
+NP NTVFDAKRLIGR+F DAVVQSDMKHWPF VVND +PKVQV YKGE++SF+PEE+S
Sbjct: 61 LNPQNTVFDAKRLIGRKFGDAVVQSDMKHWPFQVVNDGDKPKVQVNYKGESRSFFPEEIS 120
Query: 510 SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAA 689
SMVLTKMKEIAEAYLG VTNAV+TVPAYFNDSQRQATKDAG IAGLNVLRIINEPTAAA
Sbjct: 121 SMVLTKMKEIAEAYLGHPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAA 180
Query: 690 IAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNH 869
IAYGLD+ ERNVLIFDLGGGTFDVSILTI+DGIFEVK+TAGDTHLGGEDFDNR+V+H
Sbjct: 181 IAYGLDRTGKGERNVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRLVSH 240
Query: 870 FIAEFKGKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRA 1049
F+ EFK KHKKDIS+NKRAVRRLRTACERAKRTLSSSTQAS+EIDSL+EGIDFYTSITRA
Sbjct: 241 FVEEFKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQASLEIDSLFEGIDFYTSITRA 300
Query: 1050 RFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLMGGSTRIPKIQKLLQDFFNGKETE 1229
RFEEL +DLFRGTL+PVEKALRDAK+DK+QIHD+VL+GGSTRIPK+QKLLQDFFNG++
Sbjct: 301 RFEELCSDLFRGTLEPVEKALRDAKMDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDLN 360
Query: 1230 *SIHPDEXXXXXXXXXXXHLSGDKSENVSDLLLLDVTP 1343
SI+PDE L GDKSENV DLLLLDV P
Sbjct: 361 KSINPDEAVAYGAAVQAAILMGDKSENVQDLLLLDVAP 398
Score = 44.3 bits (103), Expect(2) = 0.0
Identities = 23/40 (57%), Positives = 24/40 (60%)
Frame = +2
Query: 1361 TAVGIMTVLIKRNXXXXXXXXXXXXXYSDXQPGVLIQVYE 1480
TA G+MT LIKRN YSD QPGVLIQVYE
Sbjct: 405 TAGGVMTALIKRNSTIPTKQTQTFTTYSDNQPGVLIQVYE 444
>ref|NP_001002012.1| heat shock-related 70 kDa protein 2 [Mus musculus].
Length = 633
Score = 672 bits (1735), Expect(2) = 0.0
Identities = 341/399 (85%), Positives = 362/399 (90%), Gaps = 2/399 (0%)
Frame = +3
Query: 153 SKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM 332
++GPA+GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM
Sbjct: 3 ARGPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM 62
Query: 333 NPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFVVVNDAGRPKVQVEYKGETKSFYPEEVSS 512
NPTNT+FDAKRLIGR+F+DA VQSDMKHWPF VV++ G+PKVQVEYKGE K+F+PEE+SS
Sbjct: 63 NPTNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYKGEMKTFFPEEISS 122
Query: 513 MVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAI 692
MVLTKMKEIAEAYLG V +AV+TVPAYFNDSQRQATKDAGTI GLNVLRIINEPTAAAI
Sbjct: 123 MVLTKMKEIAEAYLGGKVQSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAAAI 182
Query: 693 AYGLDKK--VGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVN 866
AYGLDKK G E+NVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMV+
Sbjct: 183 AYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVS 242
Query: 867 HFIAEFKGKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITR 1046
H EFK KHKKDI NKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEG+DFYTSITR
Sbjct: 243 HLAEEFKRKHKKDIGPNKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSITR 302
Query: 1047 ARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLMGGSTRIPKIQKLLQDFFNGKET 1226
ARFEELNADLFRGTL+PVEKALRDAKLDK QI +IVL+GGSTRIPKIQKLLQDFFNGKE
Sbjct: 303 ARFEELNADLFRGTLEPVEKALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKEL 362
Query: 1227 E*SIHPDEXXXXXXXXXXXHLSGDKSENVSDLLLLDVTP 1343
SI+PDE L GDKSENV DLLLLDVTP
Sbjct: 363 NKSINPDEAVAYGAAVQAAILIGDKSENVQDLLLLDVTP 401
Score = 37.7 bits (86), Expect(2) = 0.0
Identities = 20/40 (50%), Positives = 22/40 (55%)
Frame = +2
Query: 1361 TAVGIMTVLIKRNXXXXXXXXXXXXXYSDXQPGVLIQVYE 1480
TA G+MT LIKRN YSD Q VL+QVYE
Sbjct: 408 TAGGVMTPLIKRNTTIPTKQTQTFTTYSDNQSSVLVQVYE 447
>ref|NP_032327.2| heat shock-related 70 kDa protein 2 [Mus musculus].
Length = 633
Score = 672 bits (1735), Expect(2) = 0.0
Identities = 341/399 (85%), Positives = 362/399 (90%), Gaps = 2/399 (0%)
Frame = +3
Query: 153 SKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM 332
++GPA+GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM
Sbjct: 3 ARGPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM 62
Query: 333 NPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFVVVNDAGRPKVQVEYKGETKSFYPEEVSS 512
NPTNT+FDAKRLIGR+F+DA VQSDMKHWPF VV++ G+PKVQVEYKGE K+F+PEE+SS
Sbjct: 63 NPTNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYKGEMKTFFPEEISS 122
Query: 513 MVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAI 692
MVLTKMKEIAEAYLG V +AV+TVPAYFNDSQRQATKDAGTI GLNVLRIINEPTAAAI
Sbjct: 123 MVLTKMKEIAEAYLGGKVQSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAAAI 182
Query: 693 AYGLDKK--VGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVN 866
AYGLDKK G E+NVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMV+
Sbjct: 183 AYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVS 242
Query: 867 HFIAEFKGKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITR 1046
H EFK KHKKDI NKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEG+DFYTSITR
Sbjct: 243 HLAEEFKRKHKKDIGPNKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSITR 302
Query: 1047 ARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLMGGSTRIPKIQKLLQDFFNGKET 1226
ARFEELNADLFRGTL+PVEKALRDAKLDK QI +IVL+GGSTRIPKIQKLLQDFFNGKE
Sbjct: 303 ARFEELNADLFRGTLEPVEKALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKEL 362
Query: 1227 E*SIHPDEXXXXXXXXXXXHLSGDKSENVSDLLLLDVTP 1343
SI+PDE L GDKSENV DLLLLDVTP
Sbjct: 363 NKSINPDEAVAYGAAVQAAILIGDKSENVQDLLLLDVTP 401
Score = 37.7 bits (86), Expect(2) = 0.0
Identities = 20/40 (50%), Positives = 22/40 (55%)
Frame = +2
Query: 1361 TAVGIMTVLIKRNXXXXXXXXXXXXXYSDXQPGVLIQVYE 1480
TA G+MT LIKRN YSD Q VL+QVYE
Sbjct: 408 TAGGVMTPLIKRNTTIPTKQTQTFTTYSDNQSSVLVQVYE 447
>ref|NP_038586.2| heat shock 70 kDa protein 1-like [Mus musculus].
Length = 641
Score = 655 bits (1690), Expect(2) = 0.0
Identities = 328/397 (82%), Positives = 359/397 (90%)
Frame = +3
Query: 153 SKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM 332
+KG A+GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM
Sbjct: 4 NKGMAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM 63
Query: 333 NPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFVVVNDAGRPKVQVEYKGETKSFYPEEVSS 512
NP NTVFDAKRLIGR+F+D VVQSDMK WPF V+N+AG+PKV V YKGE K+FYPEE+SS
Sbjct: 64 NPQNTVFDAKRLIGRKFNDPVVQSDMKLWPFQVINEAGKPKVMVSYKGEKKAFYPEEISS 123
Query: 513 MVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAI 692
MVLTKMKE AEA+LG VTNAV+TVPAYFNDSQRQATKDAG IAGLNVLRIINEPTAAAI
Sbjct: 124 MVLTKMKETAEAFLGHNVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAI 183
Query: 693 AYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHF 872
AYGLDK ER+VLIFDLGGGTFDVSILTI+DGIFEVK+TAGDTHLGGEDFDNR+V+HF
Sbjct: 184 AYGLDKGSHGERHVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRLVSHF 243
Query: 873 IAEFKGKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRAR 1052
+ EFK KHKKDIS+NKRAVRRLRTACERAKRTLSSSTQA++EIDSLYEGIDFYTSITRAR
Sbjct: 244 VEEFKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQANLEIDSLYEGIDFYTSITRAR 303
Query: 1053 FEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLMGGSTRIPKIQKLLQDFFNGKETE* 1232
FEEL ADLFRGTL+PVEK+LRDAK+DK++IHDIVL+GGSTRIPK+QKLLQD+FNG++
Sbjct: 304 FEELCADLFRGTLEPVEKSLRDAKMDKAKIHDIVLVGGSTRIPKVQKLLQDYFNGRDLNK 363
Query: 1233 SIHPDEXXXXXXXXXXXHLSGDKSENVSDLLLLDVTP 1343
SI+PDE L GDKSE V DLLLLDV P
Sbjct: 364 SINPDEAVAYGAAVQAAILMGDKSEKVQDLLLLDVAP 400
Score = 45.8 bits (107), Expect(2) = 0.0
Identities = 24/40 (60%), Positives = 25/40 (62%)
Frame = +2
Query: 1361 TAVGIMTVLIKRNXXXXXXXXXXXXXYSDXQPGVLIQVYE 1480
TA G+MTVLIKRN YSD QPGVLIQVYE
Sbjct: 407 TAGGVMTVLIKRNSTIPTKQTQIFTTYSDNQPGVLIQVYE 446
>ref|NP_001156906.1| 78 kDa glucose-regulated protein precursor [Mus musculus].
Length = 655
Score = 504 bits (1298), Expect(2) = e-145
Identities = 263/397 (66%), Positives = 317/397 (79%), Gaps = 2/397 (0%)
Frame = +3
Query: 159 GPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMN 335
G VGIDLGTTYSCVGVF++G+VEIIANDQGNR TPSYVAFT + ERLIGDAAKNQ+ N
Sbjct: 29 GTVVGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTPEGERLIGDAAKNQLTSN 88
Query: 336 PTNTVFDAKRLIGRRFDDAVVQSDMKHWPFVVVNDAGRPKVQVEYKG-ETKSFYPEEVSS 512
P NTVFDAKRLIGR ++D VQ D+K PF VV +P +QV+ G +TK+F PEE+S+
Sbjct: 89 PENTVFDAKRLIGRTWNDPSVQQDIKFLPFKVVEKKTKPYIQVDIGGGQTKTFAPEEISA 148
Query: 513 MVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAI 692
MVLTKMKE AEAYLGK VT+AVVTVPAYFND+QRQATKDAGTIAGLNV+RIINEPTAAAI
Sbjct: 149 MVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVMRIINEPTAAAI 208
Query: 693 AYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHF 872
AYGLDK+ G E+N+L+FDLGGGTFDVS+LTI++G+FEV +T GDTHLGGEDFD R++ HF
Sbjct: 209 AYGLDKREG-EKNILVFDLGGGTFDVSLLTIDNGVFEVVATNGDTHLGGEDFDQRVMEHF 267
Query: 873 IAEFKGKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRAR 1052
I +K K KD+ ++ RAV++LR E+AKR LSS QA IEI+S +EG DF ++TRA+
Sbjct: 268 IKLYKKKTGKDVRKDNRAVQKLRREVEKAKRALSSQHQARIEIESFFEGEDFSETLTRAK 327
Query: 1053 FEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLMGGSTRIPKIQKLLQDFFNGKETE* 1232
FEELN DLFR T+ PV+K L D+ L KS I +IVL+GGSTRIPKIQ+L+++FFNGKE
Sbjct: 328 FEELNMDLFRSTMKPVQKVLEDSDLKKSDIDEIVLVGGSTRIPKIQQLVKEFFNGKEPSR 387
Query: 1233 SIHPDEXXXXXXXXXXXHLSGDKSENVSDLLLLDVTP 1343
I+PDE LSGD ++ DL+LLDV P
Sbjct: 388 GINPDEAVAYGAAVQAGVLSGD--QDTGDLVLLDVCP 422
Score = 29.6 bits (65), Expect(2) = e-145
Identities = 17/40 (42%), Positives = 19/40 (47%)
Frame = +2
Query: 1361 TAVGIMTVLIKRNXXXXXXXXXXXXXYSDXQPGVLIQVYE 1480
T G+MT LI RN SD QP V I+VYE
Sbjct: 429 TVGGVMTKLIPRNTVVPTKKSQIFSTASDNQPTVTIKVYE 468
>ref|NP_071705.3| 78 kDa glucose-regulated protein precursor [Mus musculus].
Length = 655
Score = 504 bits (1298), Expect(2) = e-145
Identities = 263/397 (66%), Positives = 317/397 (79%), Gaps = 2/397 (0%)
Frame = +3
Query: 159 GPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMN 335
G VGIDLGTTYSCVGVF++G+VEIIANDQGNR TPSYVAFT + ERLIGDAAKNQ+ N
Sbjct: 29 GTVVGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTPEGERLIGDAAKNQLTSN 88
Query: 336 PTNTVFDAKRLIGRRFDDAVVQSDMKHWPFVVVNDAGRPKVQVEYKG-ETKSFYPEEVSS 512
P NTVFDAKRLIGR ++D VQ D+K PF VV +P +QV+ G +TK+F PEE+S+
Sbjct: 89 PENTVFDAKRLIGRTWNDPSVQQDIKFLPFKVVEKKTKPYIQVDIGGGQTKTFAPEEISA 148
Query: 513 MVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAI 692
MVLTKMKE AEAYLGK VT+AVVTVPAYFND+QRQATKDAGTIAGLNV+RIINEPTAAAI
Sbjct: 149 MVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVMRIINEPTAAAI 208
Query: 693 AYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHF 872
AYGLDK+ G E+N+L+FDLGGGTFDVS+LTI++G+FEV +T GDTHLGGEDFD R++ HF
Sbjct: 209 AYGLDKREG-EKNILVFDLGGGTFDVSLLTIDNGVFEVVATNGDTHLGGEDFDQRVMEHF 267
Query: 873 IAEFKGKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRAR 1052
I +K K KD+ ++ RAV++LR E+AKR LSS QA IEI+S +EG DF ++TRA+
Sbjct: 268 IKLYKKKTGKDVRKDNRAVQKLRREVEKAKRALSSQHQARIEIESFFEGEDFSETLTRAK 327
Query: 1053 FEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLMGGSTRIPKIQKLLQDFFNGKETE* 1232
FEELN DLFR T+ PV+K L D+ L KS I +IVL+GGSTRIPKIQ+L+++FFNGKE
Sbjct: 328 FEELNMDLFRSTMKPVQKVLEDSDLKKSDIDEIVLVGGSTRIPKIQQLVKEFFNGKEPSR 387
Query: 1233 SIHPDEXXXXXXXXXXXHLSGDKSENVSDLLLLDVTP 1343
I+PDE LSGD ++ DL+LLDV P
Sbjct: 388 GINPDEAVAYGAAVQAGVLSGD--QDTGDLVLLDVCP 422
Score = 29.6 bits (65), Expect(2) = e-145
Identities = 17/40 (42%), Positives = 19/40 (47%)
Frame = +2
Query: 1361 TAVGIMTVLIKRNXXXXXXXXXXXXXYSDXQPGVLIQVYE 1480
T G+MT LI RN SD QP V I+VYE
Sbjct: 429 TVGGVMTKLIPRNTVVPTKKSQIFSTASDNQPTVTIKVYE 468
>ref|NP_034611.2| stress-70 protein, mitochondrial [Mus musculus].
Length = 679
Score = 371 bits (952), Expect = e-103
Identities = 204/401 (50%), Positives = 269/401 (67%), Gaps = 5/401 (1%)
Frame = +3
Query: 156 KGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAM 332
KG VGIDLGTT SCV V + + +++ N +G RTTPS VAFT D ERL+G AK Q
Sbjct: 52 KGAVVGIDLGTTNSCVAVMEGKQAKVLENAEGARTTPSVVAFTADGERLVGMPAKRQAVT 111
Query: 333 NPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFVVVNDAGRPKVQVEYKGETKSFYPEEVSS 512
NP NT + KRLIGRR+DD VQ D K+ PF +V A VE G K + P ++ +
Sbjct: 112 NPNNTFYATKRLIGRRYDDPEVQKDTKNVPFKIVR-ASNGDAWVEAHG--KLYSPSQIGA 168
Query: 513 MVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAI 692
VL KMKE AE YLG T NAV+TVPAYFNDSQRQATKDAG I+GLNVLR+INEPTAAA+
Sbjct: 169 FVLMKMKETAENYLGHTAKNAVITVPAYFNDSQRQATKDAGQISGLNVLRVINEPTAAAL 228
Query: 693 AYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHF 872
AYGLDK ++ + ++DLGGGTFD+SIL I+ G+FEVKST GDT LGGEDFD ++ H
Sbjct: 229 AYGLDK--SEDKVIAVYDLGGGTFDISILEIQKGVFEVKSTNGDTFLGGEDFDQALLRHI 286
Query: 873 IAEFKGKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGID----FYTSI 1040
+ EFK + D++++ A++R+R A E+AK LSSS Q I + L +
Sbjct: 287 VKEFKRETGVDLTKDNMALQRVREAAEKAKCELSSSVQTDINLPYLTMDASGPKHLNMKL 346
Query: 1041 TRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLMGGSTRIPKIQKLLQDFFNGK 1220
TRA+FE + DL + T+ P +KA++DA++ KS I +++L+GG TR+PK+Q+ +QD F G+
Sbjct: 347 TRAQFEGIVTDLIKRTIAPCQKAMQDAEVSKSDIGEVILVGGMTRMPKVQQTVQDLF-GR 405
Query: 1221 ETE*SIHPDEXXXXXXXXXXXHLSGDKSENVSDLLLLDVTP 1343
+++PDE L+GD V+D+LLLDVTP
Sbjct: 406 APSKAVNPDEAVAIGAAIQGGVLAGD----VTDVLLLDVTP 442
>ref|NP_056580.2| heat shock 70 kDa protein 14 isoform 1 [Mus musculus].
Length = 509
Score = 259 bits (663), Expect = 3e-69
Identities = 140/392 (35%), Positives = 231/392 (58%), Gaps = 2/392 (0%)
Frame = +3
Query: 165 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTN 344
A+G+ LG T +CV V++ G+ +++AND G+R TP+ VA+++ E+++G AAK + ++
Sbjct: 3 AIGVHLGCTSACVAVYKDGRADVVANDAGDRVTPAIVAYSEREQVVGLAAKQSRIRHVSS 62
Query: 345 TVFDAKRLIGRRFDDAVVQSDMKHWPFVVVNDAGRPKVQVEYKGETKSFYPEEVSSMVLT 524
TV K+++GR D Q + +V+ G+ + +++ ETK PE+V+ ++ +
Sbjct: 63 TVVKVKQILGRSSADPQAQKYISESKCLVIEKNGKLRYEIDTGEETKLVNPEDVARLIFS 122
Query: 525 KMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGL 704
KMKE A + LG + VVTVP F + Q+ A +A AG NVLR+I+EP+AA +AYG+
Sbjct: 123 KMKETAHSVLGSDANDVVVTVPFDFGEKQKSALGEAAGAAGFNVLRLIHEPSAALLAYGI 182
Query: 705 --DKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIA 878
D G + NVL+F LGG + +S++ + G++ V ST ++GG F + + + +
Sbjct: 183 GQDHPTG-KSNVLVFKLGGTSLSLSVMEVNSGMYRVLSTNTSDNIGGAHFTDTLAQYLAS 241
Query: 879 EFKGKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFE 1058
EF+ K D+ N RA+ +L + E AK +LS+ A+ +DSLYEG DF +++RARFE
Sbjct: 242 EFQRLFKHDVRGNARAMMKLMNSAEVAKHSLSTLGSANCFVDSLYEGQDFDCNVSRARFE 301
Query: 1059 ELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLMGGSTRIPKIQKLLQDFFNGKETE*SI 1238
L + LF + + + LR I+ +VL GGS+RIPK+Q+L++D F + SI
Sbjct: 302 LLCSPLFNKCTEAIRELLRQTGFTADDINKVVLCGGSSRIPKLQQLIKDLFPAVDLLNSI 361
Query: 1239 HPDEXXXXXXXXXXXHLSGDKSENVSDLLLLD 1334
PDE L G +S + D ++++
Sbjct: 362 PPDEVIPIGAAIEAGILVGKESTSGDDSVMIE 393
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 43,527,446
Number of extensions: 1122218
Number of successful extensions: 3157
Number of sequences better than 1.0e-05: 15
Number of HSP's gapped: 3121
Number of HSP's successfully gapped: 24
Length of query: 493
Length of database: 15,617,559
Length adjustment: 105
Effective length of query: 388
Effective length of database: 12,463,779
Effective search space: 4835946252
Effective search space used: 4835946252
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-001563
(1480 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001230836.1| heat shock 70kDa protein 8 [Sus scrofa]. 739 0.0
Alignment gi|XP_003356782.1| PREDICTED: heat shock-related 70 kDa protein... 672 0.0
Alignment gi|NP_998931.1| heat shock 70 kDa protein 1B [Sus scrofa]. 664 0.0
Alignment gi|NP_001116600.1| heat shock 70 kDa protein 1-like [Sus scrofa]. 655 0.0
Alignment gi|NP_001116599.1| heat shock 70 kDa protein [Sus scrofa]. 631 0.0
Alignment gi|XP_001927830.2| PREDICTED: 78 kDa glucose-regulated protein ... 506 e-145
Alignment gi|XP_003130009.2| PREDICTED: heat shock cognate 71 kDa protein... 370 e-109
Alignment gi|XP_003124024.1| PREDICTED: stress-70 protein, mitochondrial ... 370 e-102
Alignment gi|NP_001230322.1| heat shock 70 kDa protein 14 [Sus scrofa]. 265 6e-71
Alignment gi|XP_001924955.1| PREDICTED: heat shock 70 kDa protein 13 [Sus... 257 1e-68
>ref|NP_001230836.1| heat shock 70kDa protein 8 [Sus scrofa].
Length = 646
Score = 739 bits (1907), Expect(2) = 0.0
Identities = 379/398 (95%), Positives = 381/398 (95%)
Frame = +3
Query: 150 MSKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 329
MSKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA
Sbjct: 1 MSKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 60
Query: 330 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFVVVNDAGRPKVQVEYKGETKSFYPEEVS 509
MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFVVVNDAGRPKVQVEYKGETKSFYPEEVS
Sbjct: 61 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFVVVNDAGRPKVQVEYKGETKSFYPEEVS 120
Query: 510 SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAA 689
SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAA
Sbjct: 121 SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAA 180
Query: 690 IAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNH 869
IAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNH
Sbjct: 181 IAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNH 240
Query: 870 FIAEFKGKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRA 1049
FIAEFK KHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRA
Sbjct: 241 FIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRA 300
Query: 1050 RFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLMGGSTRIPKIQKLLQDFFNGKETE 1229
RFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVL+GGSTRIPKIQKLLQDFFNGKE
Sbjct: 301 RFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELN 360
Query: 1230 *SIHPDEXXXXXXXXXXXHLSGDKSENVSDLLLLDVTP 1343
SI+PDE LSGDKSENV DLLLLDVTP
Sbjct: 361 KSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTP 398
Score = 45.8 bits (107), Expect(2) = 0.0
Identities = 24/40 (60%), Positives = 25/40 (62%)
Frame = +2
Query: 1361 TAVGIMTVLIKRNXXXXXXXXXXXXXYSDXQPGVLIQVYE 1480
TA G+MTVLIKRN YSD QPGVLIQVYE
Sbjct: 405 TAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYE 444
>ref|XP_003356782.1| PREDICTED: heat shock-related 70 kDa protein 2-like [Sus scrofa].
Length = 636
Score = 672 bits (1735), Expect(2) = 0.0
Identities = 341/399 (85%), Positives = 362/399 (90%), Gaps = 2/399 (0%)
Frame = +3
Query: 153 SKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM 332
++GPA+GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM
Sbjct: 3 ARGPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM 62
Query: 333 NPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFVVVNDAGRPKVQVEYKGETKSFYPEEVSS 512
NPTNT+FDAKRLIGR+F+DA VQSDMKHWPF VV++ G+PKVQVEYKGE K+F+PEE+SS
Sbjct: 63 NPTNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYKGEIKTFFPEEISS 122
Query: 513 MVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAI 692
MVLTKMKEIAEAYLG V +AV+TVPAYFNDSQRQATKDAGTI GLNVLRIINEPTAAAI
Sbjct: 123 MVLTKMKEIAEAYLGGKVQSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAAAI 182
Query: 693 AYGLDKK--VGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVN 866
AYGLDKK G E+NVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMV+
Sbjct: 183 AYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVS 242
Query: 867 HFIAEFKGKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITR 1046
H EFK KHKKDI NKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEG+DFYTSITR
Sbjct: 243 HLAEEFKRKHKKDIGPNKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSITR 302
Query: 1047 ARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLMGGSTRIPKIQKLLQDFFNGKET 1226
ARFEELNADLFRGTL+PVEKALRDAKLDK QI +IVL+GGSTRIPKIQKLLQDFFNGKE
Sbjct: 303 ARFEELNADLFRGTLEPVEKALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKEL 362
Query: 1227 E*SIHPDEXXXXXXXXXXXHLSGDKSENVSDLLLLDVTP 1343
SI+PDE L GDKSENV DLLLLDVTP
Sbjct: 363 NKSINPDEAVAYGAAVQAAILIGDKSENVQDLLLLDVTP 401
Score = 37.7 bits (86), Expect(2) = 0.0
Identities = 20/40 (50%), Positives = 22/40 (55%)
Frame = +2
Query: 1361 TAVGIMTVLIKRNXXXXXXXXXXXXXYSDXQPGVLIQVYE 1480
TA G+MT LIKRN YSD Q VL+QVYE
Sbjct: 408 TAGGVMTPLIKRNTTIPTKQTQTFTTYSDNQSSVLVQVYE 447
>ref|NP_998931.1| heat shock 70 kDa protein 1B [Sus scrofa].
Length = 641
Score = 664 bits (1712), Expect(2) = 0.0
Identities = 332/398 (83%), Positives = 360/398 (90%)
Frame = +3
Query: 150 MSKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 329
M+K A+GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA
Sbjct: 1 MAKSVAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 60
Query: 330 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFVVVNDAGRPKVQVEYKGETKSFYPEEVS 509
+NP NTVFDAKRLIGR+F D VVQ+DMKHWPF V+ND +PKVQV YKGETK+FYPEE+S
Sbjct: 61 LNPQNTVFDAKRLIGRKFGDPVVQADMKHWPFRVINDGDKPKVQVSYKGETKAFYPEEIS 120
Query: 510 SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAA 689
SMVLTKMKEIAEAYLG V+NAV+TVPAYFNDSQRQATKDAG IAGLNVLRIINEPTAAA
Sbjct: 121 SMVLTKMKEIAEAYLGHPVSNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAA 180
Query: 690 IAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNH 869
IAYGLD+ ERNVLIFDLGGGTFDVSILTI+DGIFEVK+TAGDTHLGGEDFDNR+VNH
Sbjct: 181 IAYGLDRTGKGERNVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRLVNH 240
Query: 870 FIAEFKGKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRA 1049
F+ EFK KHKKDIS+NKRAVRRLRTACERAKRTLSSSTQAS+EIDSL+EGIDFYTSITRA
Sbjct: 241 FVEEFKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQASLEIDSLFEGIDFYTSITRA 300
Query: 1050 RFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLMGGSTRIPKIQKLLQDFFNGKETE 1229
RFEEL +DLFR TL+PVEKALRDAKLDK+QIHD+VL+GGSTRIPK+QKLLQDFFNG++
Sbjct: 301 RFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDLN 360
Query: 1230 *SIHPDEXXXXXXXXXXXHLSGDKSENVSDLLLLDVTP 1343
SI+PDE L GDKSENV DLLLLDV P
Sbjct: 361 KSINPDEAVAYGAAVQAAILMGDKSENVQDLLLLDVAP 398
Score = 44.3 bits (103), Expect(2) = 0.0
Identities = 23/40 (57%), Positives = 24/40 (60%)
Frame = +2
Query: 1361 TAVGIMTVLIKRNXXXXXXXXXXXXXYSDXQPGVLIQVYE 1480
TA G+MT LIKRN YSD QPGVLIQVYE
Sbjct: 405 TAGGVMTALIKRNSTIPTKQTQIFTTYSDNQPGVLIQVYE 444
>ref|NP_001116600.1| heat shock 70 kDa protein 1-like [Sus scrofa].
Length = 641
Score = 655 bits (1691), Expect(2) = 0.0
Identities = 328/397 (82%), Positives = 359/397 (90%)
Frame = +3
Query: 153 SKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM 332
+KG A+GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM
Sbjct: 4 AKGTAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM 63
Query: 333 NPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFVVVNDAGRPKVQVEYKGETKSFYPEEVSS 512
NP NTVFDAKRLIGR+F+D VVQSDMK WPF V+N+ G+PKV V YKGE K+FYPEE+SS
Sbjct: 64 NPQNTVFDAKRLIGRKFNDPVVQSDMKLWPFQVINEGGKPKVMVSYKGEKKAFYPEEISS 123
Query: 513 MVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAI 692
MVLTKMKE AEA+LG TVTNAV+TVPAYFNDSQRQATKDAG IAGLNVLRIINEPTAAAI
Sbjct: 124 MVLTKMKETAEAFLGYTVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAI 183
Query: 693 AYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHF 872
AYGLDK ER+VLIFDLGGGTFDVSILTI+DGIFEVK+TAGDTHLGGEDFDNR+V+HF
Sbjct: 184 AYGLDKAGQGERHVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRLVSHF 243
Query: 873 IAEFKGKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRAR 1052
+ EFK KHKKDIS+NKRAVRRLRTACERAKRTLSSSTQA++EIDSLYEGIDFYTSITRAR
Sbjct: 244 VEEFKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQANLEIDSLYEGIDFYTSITRAR 303
Query: 1053 FEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLMGGSTRIPKIQKLLQDFFNGKETE* 1232
FEEL ADLFRGTL+PVEKALRDAK+DK++IHDIVL+GGSTRIPK+Q+LLQD+FNG++
Sbjct: 304 FEELCADLFRGTLEPVEKALRDAKMDKAKIHDIVLVGGSTRIPKVQRLLQDYFNGRDLNK 363
Query: 1233 SIHPDEXXXXXXXXXXXHLSGDKSENVSDLLLLDVTP 1343
SI+PDE L GDKSE V DLLLLDV P
Sbjct: 364 SINPDEAVAYGAAVQAAILMGDKSEKVQDLLLLDVAP 400
Score = 45.8 bits (107), Expect(2) = 0.0
Identities = 24/40 (60%), Positives = 25/40 (62%)
Frame = +2
Query: 1361 TAVGIMTVLIKRNXXXXXXXXXXXXXYSDXQPGVLIQVYE 1480
TA G+MTVLIKRN YSD QPGVLIQVYE
Sbjct: 407 TAGGVMTVLIKRNSTIPTKQTQIFTTYSDNQPGVLIQVYE 446
>ref|NP_001116599.1| heat shock 70 kDa protein [Sus scrofa].
Length = 643
Score = 631 bits (1627), Expect(2) = 0.0
Identities = 310/393 (78%), Positives = 351/393 (89%)
Frame = +3
Query: 165 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTN 344
A+GIDLGTTYSCVGVFQHG+VEI+ANDQGNRTTPSYVAFTDTERL+GDAAK+Q A+NP N
Sbjct: 8 AIGIDLGTTYSCVGVFQHGRVEILANDQGNRTTPSYVAFTDTERLVGDAAKSQAALNPQN 67
Query: 345 TVFDAKRLIGRRFDDAVVQSDMKHWPFVVVNDAGRPKVQVEYKGETKSFYPEEVSSMVLT 524
TVFDAKRLIGR+F D VQSD+KHWPF VV++ G+PKV+V Y+GE K+FYPEE+SSMVL+
Sbjct: 68 TVFDAKRLIGRKFADPTVQSDLKHWPFQVVSEGGKPKVRVSYRGEDKAFYPEEISSMVLS 127
Query: 525 KMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGL 704
KMKE AEAYLG+ V +AV+TVPAYFNDSQRQATKDAG IAGLNVLRIINEPTAAAIAYGL
Sbjct: 128 KMKETAEAYLGQPVRHAVITVPAYFNDSQRQATKDAGAIAGLNVLRIINEPTAAAIAYGL 187
Query: 705 DKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEF 884
D++ ERNVLIFDLGGGTFDVS+LTI+ G+FEVK+TAGDTHLGGEDFDNR+VNHF+ EF
Sbjct: 188 DRRGAGERNVLIFDLGGGTFDVSVLTIDAGVFEVKATAGDTHLGGEDFDNRLVNHFMEEF 247
Query: 885 KGKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEEL 1064
+ KH+KD+S NKRA+RRLRTACERAKRTLSSSTQA++EIDSL+EG+DFYTSITRARFEEL
Sbjct: 248 RRKHRKDLSRNKRALRRLRTACERAKRTLSSSTQATLEIDSLFEGVDFYTSITRARFEEL 307
Query: 1065 NADLFRGTLDPVEKALRDAKLDKSQIHDIVLMGGSTRIPKIQKLLQDFFNGKETE*SIHP 1244
+DLFR TL+PVEKALRDAKLDK+QIHDIVL+GGSTRIPKIQKLLQDFFNG+E SI+P
Sbjct: 308 CSDLFRSTLEPVEKALRDAKLDKAQIHDIVLVGGSTRIPKIQKLLQDFFNGRELNKSINP 367
Query: 1245 DEXXXXXXXXXXXHLSGDKSENVSDLLLLDVTP 1343
DE L GDK E V DLLLLDV P
Sbjct: 368 DEAVAYGAAVQAAVLMGDKCEKVQDLLLLDVAP 400
Score = 42.7 bits (99), Expect(2) = 0.0
Identities = 22/40 (55%), Positives = 24/40 (60%)
Frame = +2
Query: 1361 TAVGIMTVLIKRNXXXXXXXXXXXXXYSDXQPGVLIQVYE 1480
TA G+MT LI+RN YSD QPGVLIQVYE
Sbjct: 407 TAGGVMTTLIQRNATIPTKQTQTFTTYSDNQPGVLIQVYE 446
>ref|XP_001927830.2| PREDICTED: 78 kDa glucose-regulated protein [Sus scrofa].
Length = 675
Score = 506 bits (1302), Expect(2) = e-145
Identities = 264/397 (66%), Positives = 317/397 (79%), Gaps = 2/397 (0%)
Frame = +3
Query: 159 GPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMN 335
G VGIDLGTTYSCVGVF++G+VEIIANDQGNR TPSYVAFT + ERLIGDAAKNQ+ N
Sbjct: 28 GTVVGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTPEGERLIGDAAKNQLTSN 87
Query: 336 PTNTVFDAKRLIGRRFDDAVVQSDMKHWPFVVVNDAGRPKVQVEYKG-ETKSFYPEEVSS 512
P NTVFDAKRLIGR ++D VQ D+K PF VV +P +QV+ G +TK+F PEE+S+
Sbjct: 88 PENTVFDAKRLIGRTWNDPSVQQDIKFLPFKVVEKKTKPYIQVDIGGGQTKTFAPEEISA 147
Query: 513 MVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAI 692
MVLTKMKE AEAYLGK VT+AVVTVPAYFND+QRQATKDAGTIAGLNV+RIINEPTAAAI
Sbjct: 148 MVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVMRIINEPTAAAI 207
Query: 693 AYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHF 872
AYGLDK+ G E+N+L+FDLGGGTFDVS+LTI++G+FEV +T GDTHLGGEDFD R++ HF
Sbjct: 208 AYGLDKREG-EKNILVFDLGGGTFDVSLLTIDNGVFEVVATNGDTHLGGEDFDQRVMEHF 266
Query: 873 IAEFKGKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRAR 1052
I +K K KD+ ++ RAV++LR E+AKR LSS QA IEI+S YEG DF ++TRA+
Sbjct: 267 IKLYKKKTGKDVRKDNRAVQKLRREVEKAKRALSSQHQARIEIESFYEGEDFSETLTRAK 326
Query: 1053 FEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLMGGSTRIPKIQKLLQDFFNGKETE* 1232
FEELN DLFR T+ PV+K L D+ L KS I +IVL+GGSTRIPKIQ+L+++FFNGKE
Sbjct: 327 FEELNMDLFRSTMKPVQKVLEDSDLKKSDIDEIVLVGGSTRIPKIQQLVKEFFNGKEPSR 386
Query: 1233 SIHPDEXXXXXXXXXXXHLSGDKSENVSDLLLLDVTP 1343
I+PDE LSGD ++ DL+LLDV P
Sbjct: 387 GINPDEAVAYGAAVQAGVLSGD--QDTGDLVLLDVCP 421
Score = 29.6 bits (65), Expect(2) = e-145
Identities = 17/40 (42%), Positives = 19/40 (47%)
Frame = +2
Query: 1361 TAVGIMTVLIKRNXXXXXXXXXXXXXYSDXQPGVLIQVYE 1480
T G+MT LI RN SD QP V I+VYE
Sbjct: 428 TVGGVMTKLIPRNTVVPTKKSQIFSTASDNQPTVTIKVYE 467
>ref|XP_003130009.2| PREDICTED: heat shock cognate 71 kDa protein-like [Sus scrofa].
Length = 599
Score = 370 bits (950), Expect(2) = e-109
Identities = 192/211 (90%), Positives = 194/211 (91%)
Frame = +3
Query: 711 KVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKG 890
KVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFK
Sbjct: 141 KVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKR 200
Query: 891 KHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNA 1070
KHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNA
Sbjct: 201 KHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNA 260
Query: 1071 DLFRGTLDPVEKALRDAKLDKSQIHDIVLMGGSTRIPKIQKLLQDFFNGKETE*SIHPDE 1250
DLFRGTLDPVEKALRDAKLDKSQIHDIVL+GGSTRIPKIQKLLQDFFNGKE SI+PDE
Sbjct: 261 DLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDE 320
Query: 1251 XXXXXXXXXXXHLSGDKSENVSDLLLLDVTP 1343
LSGDKSENV DLLLLDVTP
Sbjct: 321 AVAYGAAVQAAILSGDKSENVQDLLLLDVTP 351
Score = 45.8 bits (107), Expect(2) = e-109
Identities = 24/40 (60%), Positives = 25/40 (62%)
Frame = +2
Query: 1361 TAVGIMTVLIKRNXXXXXXXXXXXXXYSDXQPGVLIQVYE 1480
TA G+MTVLIKRN YSD QPGVLIQVYE
Sbjct: 358 TAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYE 397
>ref|XP_003124024.1| PREDICTED: stress-70 protein, mitochondrial [Sus scrofa].
Length = 679
Score = 370 bits (949), Expect = e-102
Identities = 207/417 (49%), Positives = 277/417 (66%), Gaps = 5/417 (1%)
Frame = +3
Query: 108 AFFL*LNQAYVSATMSKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT- 284
AF + + Y S + KG VGIDLGTT SCV V + + +++ N +G RTTPS VAFT
Sbjct: 37 AFRIVSRRDYASEAI-KGAVVGIDLGTTNSCVAVMEGKQAKVLENAEGARTTPSVVAFTA 95
Query: 285 DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFVVVNDAGRPKVQV 464
D ERL+G AK Q NP NT + KRLIGRR+DD VQ D+K+ PF +V A V
Sbjct: 96 DGERLVGMPAKRQAVTNPNNTFYATKRLIGRRYDDPEVQKDIKNVPFKIVR-ASNGDAWV 154
Query: 465 EYKGETKSFYPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIA 644
E G K + P ++ + VL KMKE AE YLG T NAV+TVPAYFNDSQRQATKDAG I+
Sbjct: 155 EAHG--KLYSPSQIGAFVLMKMKETAENYLGHTAKNAVITVPAYFNDSQRQATKDAGQIS 212
Query: 645 GLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGD 824
GLNVLR+INEPTAAA+AYGLDK ++ + ++DLGGGTFD+SIL I+ G+FEVKST GD
Sbjct: 213 GLNVLRVINEPTAAALAYGLDK--SEDKIIAVYDLGGGTFDISILEIQKGVFEVKSTNGD 270
Query: 825 THLGGEDFDNRMVNHFIAEFKGKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEID 1004
T LGGEDFD ++ + + EFK + D++++ A++R+R A E+AK LSSS Q I +
Sbjct: 271 TFLGGEDFDQALLRYIVKEFKRETGVDLTKDNMALQRVREAAEKAKCELSSSVQTDINLP 330
Query: 1005 SLYEGID----FYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLMGGST 1172
L +TRA+FE + DL + T+ P +KA++DA++ KS I +++L+GG T
Sbjct: 331 YLTMDASGPKHLNMKLTRAQFEGIVTDLIKRTIAPCQKAMQDAEVSKSDIGEVILVGGMT 390
Query: 1173 RIPKIQKLLQDFFNGKETE*SIHPDEXXXXXXXXXXXHLSGDKSENVSDLLLLDVTP 1343
R+PK+Q+ +QD F G+ +++PDE L+GD V+D+LLLDVTP
Sbjct: 391 RMPKVQQTVQDLF-GRAPSKAVNPDEAVAIGAAIQGGVLAGD----VTDVLLLDVTP 442
>ref|NP_001230322.1| heat shock 70 kDa protein 14 [Sus scrofa].
Length = 509
Score = 265 bits (676), Expect = 6e-71
Identities = 140/392 (35%), Positives = 229/392 (58%), Gaps = 2/392 (0%)
Frame = +3
Query: 165 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTN 344
A+G+ LG T +CV V++ G+ +++AND G+R TP+ VA+T+ E ++G AAK N +N
Sbjct: 3 AIGVHLGCTSACVAVYKDGRADVVANDAGDRVTPAVVAYTENEEVVGLAAKQSRIRNISN 62
Query: 345 TVFDAKRLIGRRFDDAVVQSDMKHWPFVVVNDAGRPKVQVEYKGETKSFYPEEVSSMVLT 524
TV K+++GR DD Q + +V+ G+ + +++ E K PE+V+ ++ +
Sbjct: 63 TVMKVKQILGRSSDDPQAQKYISESKCLVIEKNGKLRYEIDTGEEMKFVNPEDVARLIFS 122
Query: 525 KMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGL 704
KMKE A + LG + V+TVP F + Q+ A +A AG NVLR+I+EP+AA +AYG+
Sbjct: 123 KMKETAHSVLGPDANDVVITVPFDFGEKQKNALGEAARAAGFNVLRLIHEPSAALLAYGI 182
Query: 705 --DKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIA 878
D G + N+L+F LGG + +S++ + GI+ V ST D ++GG F + + +
Sbjct: 183 GQDSPTG-KSNILVFKLGGTSLSISVMQVNSGIYRVLSTNTDNNIGGTHFTETLAQYLAS 241
Query: 879 EFKGKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFE 1058
EF+ K D+ N RA+ +L + + AK +LS+ A+ +DSLYEG DF +++RARFE
Sbjct: 242 EFQRSFKHDVRGNARAMMKLMNSADTAKHSLSTLGSANCFLDSLYEGQDFDCNVSRARFE 301
Query: 1059 ELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLMGGSTRIPKIQKLLQDFFNGKETE*SI 1238
L + LF ++ + L + I+ +VL GGS+RIP++Q+++++ F E SI
Sbjct: 302 LLCSPLFNKCIEAIRGLLEQSGFTADDINKVVLCGGSSRIPRLQQMIKELFPAVELLNSI 361
Query: 1239 HPDEXXXXXXXXXXXHLSGDKSENVSDLLLLD 1334
PDE L G ++ V D L ++
Sbjct: 362 PPDEVIPIGAAIEAGILIGKENLLVEDSLKIE 393
>ref|XP_001924955.1| PREDICTED: heat shock 70 kDa protein 13 [Sus scrofa].
Length = 471
Score = 257 bits (657), Expect = 1e-68
Identities = 159/420 (37%), Positives = 237/420 (56%), Gaps = 45/420 (10%)
Frame = +3
Query: 123 LNQAYVSATMSKGPAVGIDLGTTYSCVGVF--QHGKVEIIANDQGNRTTPSYVAFTDTER 296
L Q Y+ K +GIDLGTTY VGVF GKV++I ++ G+ + PS V+FTD +
Sbjct: 21 LAQQYLPLPTPK--VIGIDLGTTYCSVGVFFPGTGKVKVIPDENGHISIPSMVSFTDDDV 78
Query: 297 LIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFVVVNDAGRPKVQVEYKG 476
+G + NP NT++DAKR IG+ F +++++ +PF V+N G + V
Sbjct: 79 YVGYESLELADSNPQNTIYDAKRFIGKIFTPEELEAEIGRYPFKVLNKNGMVEFSVT-SN 137
Query: 477 ETKSFYPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNV 656
ET + PE V S +L K+KE+AE YLG V NAV++VPA F+ QR +T +A +AGL +
Sbjct: 138 ETITVTPEYVGSRLLLKLKEMAEEYLGMPVANAVISVPAEFDLKQRNSTIEAANLAGLKI 197
Query: 657 LRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLG 836
LR+INEPTAAA+AYGL K +VL+ DLGGGT DVS+L + G+F ++ +G+ LG
Sbjct: 198 LRVINEPTAAAMAYGLHK--ADVFHVLVIDLGGGTLDVSLLNKQGGMFLTRAMSGNNKLG 255
Query: 837 GEDFDNRMVNHFIAEFKGKHKKDISENKRAVRRLRTACERAKRTLS-------------- 974
G+DF+ R++ + + + I K + RLR A E K L+
Sbjct: 256 GQDFNQRLLQYLYKQIYQTY-GFIPSRKEEIHRLRQAVEMVKLNLTLHQTAHMSVLLTVE 314
Query: 975 -------SSTQASIEIDSLYEG----------------------IDFYTSITRARFEELN 1067
ST A + D L + F T I+R F+ LN
Sbjct: 315 EKDRREPQSTDAELPKDRLSSADRPHMNRVFGATLSEKKNGESQVLFETEISRKLFDTLN 374
Query: 1068 ADLFRGTLDPVEKALRDAKLDKSQIHDIVLMGGSTRIPKIQKLLQDFFNGKETE*SIHPD 1247
DLF+ L P+++ L++ L+K++I ++VL+GGSTRIP+I++++Q+FF GK+ S+ PD
Sbjct: 375 EDLFQKILVPIQQVLKEGHLEKTEIDEVVLVGGSTRIPRIRQVIQEFF-GKDPNTSVDPD 433
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 31,894,592
Number of extensions: 816616
Number of successful extensions: 2296
Number of sequences better than 1.0e-05: 14
Number of HSP's gapped: 2271
Number of HSP's successfully gapped: 22
Length of query: 493
Length of database: 11,343,932
Length adjustment: 103
Effective length of query: 390
Effective length of database: 8,779,541
Effective search space: 3424020990
Effective search space used: 3424020990
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-001563
(1480 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr09 1053 0.0
gb|GL895435.1| Sus scrofa unplaced genomic scaffold chrU_scaffol... 198 6e-48
gb|GL896522.1| Sus scrofa unplaced genomic scaffold chrU_scaffol... 109 4e-21
Sscrofa_Chr07 84 3e-13
>Sscrofa_Chr09
|| Length = 153670197
Score = 1053 bits (531), Expect = 0.0
Identities = 554/559 (99%), Gaps = 2/559 (0%)
Strand = Plus / Plus
Query: 712 aggttggagctgaaagaaacgtgctgatcttcgacttgggtggtggcacttttgatgtgt 771
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55305502 aggttggagctgaaagaaacgtgctgatcttcgacttgggtggtggcacttttgatgtgt 55305561
Query: 772 caatcctcactattgaggatggtatcttcgaggtcaaatctacagctggagatacccact 831
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55305562 caatcctcactattgaggatggtatcttcgaggtcaaatctacagctggagatacccact 55305621
Query: 832 tgggtggagaggactttgacaatagaatggtcaaccattttattgcagagttcaagggca 891
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 55305622 tgggtggagaggactttgacaatagaatggtcaaccattttattgcagagttcaagcgca 55305681
Query: 892 agcacaagaaggacatcagcgagaacaagagggctgtccgtcgcctccgtactgcttgtg 951
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55305682 agcacaagaaggacatcagcgagaacaagagggctgtccgtcgcctccgtactgcttgtg 55305741
Query: 952 agcgtgctaagcgcactctctcttccagcactcaggccagtattgagattgattccctct 1011
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55305742 agcgtgctaagcgcactctctcttccagcactcaggccagtattgagattgattccctct 55305801
Query: 1012 atgaaggaatcgacttctatacctctattactcgtgcccgatttgaagaattgaatgctg 1071
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55305802 atgaaggaatcgacttctatacctctattactcgtgcccgatttgaagaattgaatgctg 55305861
Query: 1072 acctgttccgtggcaccctggatcctgtggagaaagcccttcgggatgccaagctagaca 1131
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55305862 acctgttccgtggcaccctggatcctgtggagaaagcccttcgggatgccaagctagaca 55305921
Query: 1132 agtctcagatccatgacattgtcctgatgggtggctcaacccgtatccccaagatccaga 1191
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 55305922 agtctcagatccatgacattgtcctggtgggtggctcaacccgtatccccaagatccaga 55305981
Query: 1192 agcttctgcaggacttcttcaacgggaaagaaactgaat-agagcatccaccccgatgag 1250
|||||||||||||||||||||||||||||| |||||||| |||||||| |||||||||||
Sbjct: 55305982 agcttctgcaggacttcttcaacgggaaag-aactgaataagagcatcaaccccgatgag 55306040
Query: 1251 gctgttgcttatggtgcag 1269
|||||||||||||||||||
Sbjct: 55306041 gctgttgcttatggtgcag 55306059
Score = 1053 bits (531), Expect = 0.0
Identities = 554/559 (99%), Gaps = 2/559 (0%)
Strand = Plus / Plus
Query: 712 aggttggagctgaaagaaacgtgctgatcttcgacttgggtggtggcacttttgatgtgt 771
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55407316 aggttggagctgaaagaaacgtgctgatcttcgacttgggtggtggcacttttgatgtgt 55407375
Query: 772 caatcctcactattgaggatggtatcttcgaggtcaaatctacagctggagatacccact 831
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55407376 caatcctcactattgaggatggtatcttcgaggtcaaatctacagctggagatacccact 55407435
Query: 832 tgggtggagaggactttgacaatagaatggtcaaccattttattgcagagttcaagggca 891
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 55407436 tgggtggagaggactttgacaatagaatggtcaaccattttattgcagagttcaagcgca 55407495
Query: 892 agcacaagaaggacatcagcgagaacaagagggctgtccgtcgcctccgtactgcttgtg 951
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55407496 agcacaagaaggacatcagcgagaacaagagggctgtccgtcgcctccgtactgcttgtg 55407555
Query: 952 agcgtgctaagcgcactctctcttccagcactcaggccagtattgagattgattccctct 1011
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55407556 agcgtgctaagcgcactctctcttccagcactcaggccagtattgagattgattccctct 55407615
Query: 1012 atgaaggaatcgacttctatacctctattactcgtgcccgatttgaagaattgaatgctg 1071
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55407616 atgaaggaatcgacttctatacctctattactcgtgcccgatttgaagaattgaatgctg 55407675
Query: 1072 acctgttccgtggcaccctggatcctgtggagaaagcccttcgggatgccaagctagaca 1131
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55407676 acctgttccgtggcaccctggatcctgtggagaaagcccttcgggatgccaagctagaca 55407735
Query: 1132 agtctcagatccatgacattgtcctgatgggtggctcaacccgtatccccaagatccaga 1191
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 55407736 agtctcagatccatgacattgtcctggtgggtggctcaacccgtatccccaagatccaga 55407795
Query: 1192 agcttctgcaggacttcttcaacgggaaagaaactgaat-agagcatccaccccgatgag 1250
|||||||||||||||||||||||||||||| |||||||| |||||||| |||||||||||
Sbjct: 55407796 agcttctgcaggacttcttcaacgggaaag-aactgaataagagcatcaaccccgatgag 55407854
Query: 1251 gctgttgcttatggtgcag 1269
|||||||||||||||||||
Sbjct: 55407855 gctgttgcttatggtgcag 55407873
Score = 422 bits (213), Expect = e-115
Identities = 213/213 (100%)
Strand = Plus / Plus
Query: 142 cagcaaccatgtctaagggacctgcagttggcattgatcttggcaccacctattcttgtg 201
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55296123 cagcaaccatgtctaagggacctgcagttggcattgatcttggcaccacctattcttgtg 55296182
Query: 202 tgggtgtcttccagcacggaaaagtggaaataattgctaatgatcaggggaaccgaacca 261
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55296183 tgggtgtcttccagcacggaaaagtggaaataattgctaatgatcaggggaaccgaacca 55296242
Query: 262 ccccaagctatgttgcctttactgatactgaacgattgattggtgatgctgcgaagaacc 321
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55296243 ccccaagctatgttgcctttactgatactgaacgattgattggtgatgctgcgaagaacc 55296302
Query: 322 aagttgcgatgaatcccaccaacacggtttttg 354
|||||||||||||||||||||||||||||||||
Sbjct: 55296303 aagttgcgatgaatcccaccaacacggtttttg 55296335
Score = 422 bits (213), Expect = e-115
Identities = 213/213 (100%)
Strand = Plus / Plus
Query: 142 cagcaaccatgtctaagggacctgcagttggcattgatcttggcaccacctattcttgtg 201
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55406191 cagcaaccatgtctaagggacctgcagttggcattgatcttggcaccacctattcttgtg 55406250
Query: 202 tgggtgtcttccagcacggaaaagtggaaataattgctaatgatcaggggaaccgaacca 261
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55406251 tgggtgtcttccagcacggaaaagtggaaataattgctaatgatcaggggaaccgaacca 55406310
Query: 262 ccccaagctatgttgcctttactgatactgaacgattgattggtgatgctgcgaagaacc 321
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55406311 ccccaagctatgttgcctttactgatactgaacgattgattggtgatgctgcgaagaacc 55406370
Query: 322 aagttgcgatgaatcccaccaacacggtttttg 354
|||||||||||||||||||||||||||||||||
Sbjct: 55406371 aagttgcgatgaatcccaccaacacggtttttg 55406403
Score = 410 bits (207), Expect = e-112
Identities = 207/207 (100%)
Strand = Plus / Plus
Query: 354 gatgccaaacgcctcattggacgaagatttgatgatgctgttgtccagtctgatatgaag 413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55406691 gatgccaaacgcctcattggacgaagatttgatgatgctgttgtccagtctgatatgaag 55406750
Query: 414 cattggcccttcgtggtggtgaatgatgcaggcaggcctaaggtccaagtagaatacaag 473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55406751 cattggcccttcgtggtggtgaatgatgcaggcaggcctaaggtccaagtagaatacaag 55406810
Query: 474 ggagagacaaaaagtttctatccagaggaggtgtcatccatggttttgacaaagatgaag 533
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55406811 ggagagacaaaaagtttctatccagaggaggtgtcatccatggttttgacaaagatgaag 55406870
Query: 534 gaaattgcagaagcctaccttgggaag 560
|||||||||||||||||||||||||||
Sbjct: 55406871 gaaattgcagaagcctaccttgggaag 55406897
Score = 311 bits (157), Expect = 6e-82
Identities = 195/207 (94%), Gaps = 1/207 (0%)
Strand = Plus / Plus
Query: 1268 agctgtgcaggcagcccatttatctggagacaaatctgaaaatgtgtcagatttgctgct 1327
|||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||
Sbjct: 55306254 agctgtgcaggcagccattttatctggagacaaatctgaaaatgttcaagatttgctgct 55306313
Query: 1328 actggatgtcactcctctttcccntggccttgaa-ctgctgttggaatcatgactgtcct 1386
||||||||||||||||||||||| |||| ||||| |||||| |||| |||||||||||||
Sbjct: 55306314 actggatgtcactcctctttcccttggcattgaaactgctggtggagtcatgactgtcct 55306373
Query: 1387 catcaagcgcaatactaccattcctactaagcagacgcagacggtcaccacctactctga 1446
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 55306374 catcaagcgcaatactaccattcctactaagcagacgcagacgttcaccacctactctga 55306433
Query: 1447 cnaccagcctggtgtgctcattcaggt 1473
| |||||||||||||||||||||||||
Sbjct: 55306434 caaccagcctggtgtgctcattcaggt 55306460
Score = 311 bits (157), Expect = 6e-82
Identities = 195/207 (94%), Gaps = 1/207 (0%)
Strand = Plus / Plus
Query: 1268 agctgtgcaggcagcccatttatctggagacaaatctgaaaatgtgtcagatttgctgct 1327
|||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||
Sbjct: 55408068 agctgtgcaggcagccattttatctggagacaaatctgaaaatgttcaagatttgctgct 55408127
Query: 1328 actggatgtcactcctctttcccntggccttgaa-ctgctgttggaatcatgactgtcct 1386
||||||||||||||||||||||| |||| ||||| |||||| |||| |||||||||||||
Sbjct: 55408128 actggatgtcactcctctttcccttggcattgaaactgctggtggagtcatgactgtcct 55408187
Query: 1387 catcaagcgcaatactaccattcctactaagcagacgcagacggtcaccacctactctga 1446
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 55408188 catcaagcgcaatactaccattcctactaagcagacgcagacgttcaccacctactctga 55408247
Query: 1447 cnaccagcctggtgtgctcattcaggt 1473
| |||||||||||||||||||||||||
Sbjct: 55408248 caaccagcctggtgtgctcattcaggt 55408274
Score = 99.6 bits (50), Expect = 4e-18
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 74 tctcattgaaccgtcgggagcgcttcgggttgcggcnnnnnnnctctagctaaaccaggc 133
|||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 55295326 tctcattgaaccgtcgggagcgcttcgggttgcggctttttttctctagctaaaccaggc 55295385
Query: 134 ctacgtttcag 144
|||||||||||
Sbjct: 55295386 ctacgtttcag 55295396
Score = 99.6 bits (50), Expect = 4e-18
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 74 tctcattgaaccgtcgggagcgcttcgggttgcggcnnnnnnnctctagctaaaccaggc 133
|||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 55405394 tctcattgaaccgtcgggagcgcttcgggttgcggctttttttctctagctaaaccaggc 55405453
Query: 134 ctacgtttcag 144
|||||||||||
Sbjct: 55405454 ctacgtttcag 55405464
>gb|GL895435.1| Sus scrofa unplaced genomic scaffold chrU_scaffold400
Length = 1092
Score = 198 bits (100), Expect = 6e-48
Identities = 279/336 (83%), Gaps = 2/336 (0%)
Strand = Plus / Plus
Query: 948 tgtgagcgtgctaagcgcactctctcttccagcactcaggccagtattgagattgattcc 1007
|||||||| || || ||||| || ||||||||||| ||||||| | || || || |||
Sbjct: 690 tgtgagcgcgccaaacgcaccctgtcttccagcacccaggccacgctggaaatcgactcc 749
Query: 1008 ctctatgaaggaatcgacttctatacctctattactcgtgcccgatttgaagaattgaat 1067
|||| ||| || | |||||||| || ||||| ||||| ||||| ||||||||| ||
Sbjct: 750 ctctttgagggtgtagacttctacacttctatcactcgagcccgctttgaagaactgtgc 809
Query: 1068 gctgacctgttccgtggcaccctggatcctgtggagaaagcccttcgggatgccaagcta 1127
| ||||| ||||| |||||||||| || |||||||||||||| ||||||||||||||
Sbjct: 810 tcagacctcttccgcagcaccctggagccagtggagaaagccctgcgggatgccaagctg 869
Query: 1128 gacaagtctcagatccatgacattgtcctgatgggtggctcaacccgtatccccaagatc 1187
|||||| ||||||||||||| |||||||| |||||||||| ||||| |||||||||||
Sbjct: 870 gacaaggctcagatccatgatattgtcctagtgggtggctctacccgcatccccaagata 929
Query: 1188 cagaagcttctgcaggacttcttcaacgggaaagaaactgaa-tagagcatccaccccga 1246
|||||||||||||||||||||||||| || | ||||||| ||||||| |||| ||
Sbjct: 930 cagaagcttctgcaggacttcttcaa-tggccgggaactgaacaagagcataaacccaga 988
Query: 1247 tgaggctgttgcttatggtgcagctgtgcaggcagc 1282
||||||||| || |||||||| ||||||||||||||
Sbjct: 989 tgaggctgtggcctatggtgctgctgtgcaggcagc 1024
>gb|GL896522.1| Sus scrofa unplaced genomic scaffold chrU_scaffold854
Length = 16607
Score = 109 bits (55), Expect = 4e-21
Identities = 462/595 (77%), Gaps = 2/595 (0%)
Strand = Plus / Plus
Query: 561 actgttaccaatgctgttgtcacagtaccagcatactttaacgactctcagcgtcaggct 620
||||| ||||||||||| |||| || ||||| || || || |||||||| || |||||
Sbjct: 13253 actgtcaccaatgctgtgatcactgtgccagcctatttcaatgactctcaacgccaggcc 13312
Query: 621 accaaagatgctggaactattgctggtctcaatgtacttagaatcatcaatgagccaact 680
||||| ||||| || ||||| ||||||||||| || ||||| |||||||| || ||
Sbjct: 13313 accaaggatgcaggcgtcattgcaggtctcaatgtgctaagaattatcaatgaacccaca 13372
Query: 681 gctgctgctattgcttatggcttagacaaa-aaggttggagctgaaagaaacgtgctgat 739
|||||||| ||||| ||||||||||| ||| ||| | | || || | || |||||
Sbjct: 13373 gctgctgccattgcctatggcttagataaagcaggccag-ggagagcgacatgtcctgat 13431
Query: 740 cttcgacttgggtggtggcacttttgatgtgtcaatcctcactattgaggatggtatctt 799
||| || ||||||| ||||| ||||||||||| ||||| || || || ||||| || ||
Sbjct: 13432 ctttgatctgggtggaggcacatttgatgtgtccatcctgaccatagatgatgggatttt 13491
Query: 800 cgaggtcaaatctacagctggagatacccacttgggtggagaggactttgacaatagaat 859
|||||||| | |||||||| || ||||||||||| || |||||||| ||||| || |
Sbjct: 13492 tgaggtcaaggccacagctggggacacccacttgggcggcgaggacttcgacaacaggct 13551
Query: 860 ggtcaaccattttattgcagagttcaagggcaagcacaagaaggacatcagcgagaacaa 919
||| | ||| || | | ||||||||| | ||||||||||||||||||||| |||||||
Sbjct: 13552 ggtgagccacttcgtggaggagttcaagaggaagcacaagaaggacatcagccagaacaa 13611
Query: 920 gagggctgtccgtcgcctccgtactgcttgtgagcgtgctaagcgcactctctcttccag 979
| |||| || | || || || || || || ||||| || ||| | || || || |||||
Sbjct: 13612 gcgggcggtgaggcggctgcgcacggcctgcgagcgggccaagaggaccctgtcgtccag 13671
Query: 980 cactcaggccagtattgagattgattccctctatgaaggaatcgacttctatacctctat 1039
||| ||||||| | || |||||||| || || ||||| ||||| ||||| || || ||
Sbjct: 13672 cacgcaggccaacttggaaattgattcgctttacgaaggcatcgatttctacacatccat 13731
Query: 1040 tactcgtgcccgatttgaagaattgaatgctgacctgttccgtggcaccctggatcctgt 1099
|| | ||||| |||||||| || || |||||||| | ||||||||||| || ||
Sbjct: 13732 caccagagcccggtttgaagagctgtgcgcagacctgtttaggggcaccctggagccggt 13791
Query: 1100 ggagaaagcccttcgggatgccaagctagacaagtctcagatccatgacattgtc 1154
|||||| || ||||||||||||||| | || ||| || | ||||| |||||||||
Sbjct: 13792 ggagaaggctcttcgggatgccaagatggataaggctaaaatccacgacattgtc 13846
Score = 97.6 bits (49), Expect = 2e-17
Identities = 379/489 (77%)
Strand = Plus / Minus
Query: 729 aacgtgctgatcttcgacttgggtggtggcacttttgatgtgtcaatcctcactattgag 788
|||||||||||||||||| |||| || ||||| || || ||||| ||||| || || ||
Sbjct: 1343 aacgtgctgatcttcgacctgggcgggggcacgttcgacgtgtccatcctgacgatcgac 1284
Query: 789 gatggtatcttcgaggtcaaatctacagctggagatacccacttgggtggagaggacttt 848
|| || ||||||||||| || | || || || || || ||| |||| || ||||||||
Sbjct: 1283 gacggcatcttcgaggtgaaggccacggcgggggacacgcacctgggcggcgaggacttc 1224
Query: 849 gacaatagaatggtcaaccattttattgcagagttcaagggcaagcacaagaaggacatc 908
||||| || |||| ||||| || | | ||||||||| | ||||||||||||||||||
Sbjct: 1223 gacaacaggctggtgaaccacttcgtggaggagttcaagaggaagcacaagaaggacatc 1164
Query: 909 agcgagaacaagagggctgtccgtcgcctccgtactgcttgtgagcgtgctaagcgcact 968
||| |||||||| |||| || | || || || || || || ||||| || ||| | ||
Sbjct: 1163 agccagaacaagcgggcggtgaggcggctgcgcacggcctgcgagcgggccaagaggacc 1104
Query: 969 ctctcttccagcactcaggccagtattgagattgattccctctatgaaggaatcgacttc 1028
|| || |||||||| |||||||| | ||||| || ||||| | || || |||||||||
Sbjct: 1103 ctgtcgtccagcacgcaggccagcctggagatcgactccctgttcgagggcatcgacttc 1044
Query: 1029 tatacctctattactcgtgcccgatttgaagaattgaatgctgacctgttccgtggcacc 1088
|| || || || || || || || || || || || | ||||||||||| |||||
Sbjct: 1043 tacacgtccatcacccgggcgcgcttcgaggagctgtgctcggacctgttccgcagcacc 984
Query: 1089 ctggatcctgtggagaaagcccttcgggatgccaagctagacaagtctcagatccatgac 1148
||||| || |||||||| || || || || || ||||| |||||| | |||||||| |||
Sbjct: 983 ctggagccggtggagaaggctctgcgcgacgcgaagctggacaaggcccagatccacgac 924
Query: 1149 attgtcctgatgggtggctcaacccgtatccccaagatccagaagcttctgcaggacttc 1208
| || ||| |||| ||||| || || ||||||||| | |||||||| ||||||||||||
Sbjct: 923 ctggtgctggtggggggctcgacgcgcatccccaaggtgcagaagctgctgcaggacttc 864
Query: 1209 ttcaacggg 1217
|||||||||
Sbjct: 863 ttcaacggg 855
>Sscrofa_Chr07
|| Length = 134764511
Score = 83.8 bits (42), Expect = 3e-13
Identities = 120/146 (82%)
Strand = Plus / Plus
Query: 1071 gacctgttccgtggcaccctggatcctgtggagaaagcccttcgggatgccaagctagac 1130
|||||||| || || ||||| || || |||||||| || || || || |||||||| |||
Sbjct: 94988663 gacctgtttcgcgggaccctcgagccggtggagaaggcgctgcgcgacgccaagctggac 94988722
Query: 1131 aagtctcagatccatgacattgtcctgatgggtggctcaacccgtatccccaagatccag 1190
||| |||||||| || || || ||| |||| ||||| || || |||||||||||||||
Sbjct: 94988723 aagggccagatccaggagatcgtgctggtgggcggctccactcgcatccccaagatccag 94988782
Query: 1191 aagcttctgcaggacttcttcaacgg 1216
||||| |||||||| |||||||||||
Sbjct: 94988783 aagctgctgcaggatttcttcaacgg 94988808
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 38,052,440
Number of extensions: 191
Number of successful extensions: 191
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 184
Number of HSP's successfully gapped: 17
Length of query: 1480
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 1459
Effective length of database: 2,808,413,156
Effective search space: 4097474794604
Effective search space used: 4097474794604
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)