Animal-Genome cDNA 20110601C-001620

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-001620
         (1318 letters)

Database: RefSeq49_BP.fasta 
           33,088 sequences; 17,681,374 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001013610.1| actin, gamma-enteric smooth muscle [Bos taur...   714   0.0  
Alignment   gi|NP_001029674.1| actin, aortic smooth muscle [Bos taurus].         709   0.0  
Alignment   gi|NP_001029757.1| actin, alpha cardiac muscle 1 [Bos taurus].       704   0.0  
Alignment   gi|NP_776650.1| actin, alpha skeletal muscle [Bos taurus].           701   0.0  
Alignment   gi|NP_001028790.1| actin, cytoplasmic 2 [Bos taurus].                680   0.0  
Alignment   gi|NP_776404.2| actin, cytoplasmic 1 [Bos taurus].                   676   0.0  
Alignment   gi|XP_002696363.1| PREDICTED: beta actin-like [Bos taurus].          657   0.0  
Alignment   gi|XP_001249299.2| PREDICTED: beta actin [Bos taurus].               657   0.0  
Alignment   gi|NP_001096808.1| beta-centractin [Bos taurus].                     398   e-111
Alignment   gi|NP_001180177.1| alpha-centractin [Bos taurus].                    394   e-110

>ref|NP_001013610.1| actin, gamma-enteric smooth muscle [Bos taurus].
          Length = 376

 Score =  714 bits (1842), Expect(2) = 0.0
 Identities = 353/355 (99%), Positives = 354/355 (99%)
 Frame = +1

Query: 190  MCEEETTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 369
            MCEEETTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1    MCEEETTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 370  SKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREKM 549
            SKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREKM
Sbjct: 61   SKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREKM 120

Query: 550  TQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLD 729
            TQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLD
Sbjct: 121  TQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLD 180

Query: 730  LAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKS 909
            LAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKS
Sbjct: 181  LAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKS 240

Query: 910  YELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVL 1089
            YELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVL
Sbjct: 241  YELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVL 300

Query: 1090 SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFSR 1254
            SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF +
Sbjct: 301  SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQ 355



 Score = 53.1 bits (126), Expect(2) = 0.0
 Identities = 22/23 (95%), Positives = 22/23 (95%)
 Frame = +3

Query: 1248 QQMWISKPEYDEAGPSICHRKCF 1316
            QQMWISKPEYDEAGPSI HRKCF
Sbjct: 354  QQMWISKPEYDEAGPSIVHRKCF 376


>ref|NP_001029674.1| actin, aortic smooth muscle [Bos taurus].
          Length = 377

 Score =  709 bits (1830), Expect = 0.0
 Identities = 354/368 (96%), Positives = 357/368 (97%), Gaps = 1/368 (0%)
 Frame = +1

Query: 190  MCEEE-TTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA 366
            MCEEE +TALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
Sbjct: 1    MCEEEDSTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA 60

Query: 367  QSKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREK 546
            QSKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREK
Sbjct: 61   QSKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREK 120

Query: 547  MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRL 726
            MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRL
Sbjct: 121  MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRL 180

Query: 727  DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEK 906
            DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEK
Sbjct: 181  DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEK 240

Query: 907  SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNV 1086
            SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNV
Sbjct: 241  SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNV 300

Query: 1087 LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFSRCGSA 1266
            LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF +   +
Sbjct: 301  LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 360

Query: 1267 SQSMTRQG 1290
             Q     G
Sbjct: 361  KQEYDEAG 368



 Score = 50.1 bits (118), Expect = 4e-06
 Identities = 21/23 (91%), Positives = 21/23 (91%)
 Frame = +3

Query: 1248 QQMWISKPEYDEAGPSICHRKCF 1316
            QQMWISK EYDEAGPSI HRKCF
Sbjct: 355  QQMWISKQEYDEAGPSIVHRKCF 377


>ref|NP_001029757.1| actin, alpha cardiac muscle 1 [Bos taurus].
          Length = 377

 Score =  704 bits (1818), Expect = 0.0
 Identities = 352/368 (95%), Positives = 356/368 (96%), Gaps = 1/368 (0%)
 Frame = +1

Query: 190  MCE-EETTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA 366
            MC+ EETTALVCDNGSGL KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
Sbjct: 1    MCDDEETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA 60

Query: 367  QSKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREK 546
            QSKRGILTLKYPIEHGIITNWDDMEKIWHH+FYNELRVAPEEHPTLLTEAPLNPKANREK
Sbjct: 61   QSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREK 120

Query: 547  MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRL 726
            MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRL
Sbjct: 121  MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRL 180

Query: 727  DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEK 906
            DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEK
Sbjct: 181  DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEK 240

Query: 907  SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNV 1086
            SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNV
Sbjct: 241  SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNV 300

Query: 1087 LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFSRCGSA 1266
            LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF +   +
Sbjct: 301  LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 360

Query: 1267 SQSMTRQG 1290
             Q     G
Sbjct: 361  KQEYDEAG 368



 Score = 50.1 bits (118), Expect = 4e-06
 Identities = 21/23 (91%), Positives = 21/23 (91%)
 Frame = +3

Query: 1248 QQMWISKPEYDEAGPSICHRKCF 1316
            QQMWISK EYDEAGPSI HRKCF
Sbjct: 355  QQMWISKQEYDEAGPSIVHRKCF 377


>ref|NP_776650.1| actin, alpha skeletal muscle [Bos taurus].
          Length = 377

 Score =  701 bits (1810), Expect = 0.0
 Identities = 350/368 (95%), Positives = 354/368 (96%), Gaps = 1/368 (0%)
 Frame = +1

Query: 190  MCEE-ETTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA 366
            MC+E ETTALVCDNGSGL KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
Sbjct: 1    MCDEDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA 60

Query: 367  QSKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREK 546
            QSKRGILTLKYPIEHGIITNWDDMEKIWHH+FYNELRVAPEEHPTLLTEAPLNPKANREK
Sbjct: 61   QSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREK 120

Query: 547  MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRL 726
            MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRL
Sbjct: 121  MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRL 180

Query: 727  DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEK 906
            DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEK
Sbjct: 181  DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEK 240

Query: 907  SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNV 1086
            SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNV
Sbjct: 241  SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNV 300

Query: 1087 LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFSRCGSA 1266
            +SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSIL SLSTF +    
Sbjct: 301  MSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILRSLSTFQQMWIT 360

Query: 1267 SQSMTRQG 1290
             Q     G
Sbjct: 361  KQEYDEAG 368



 Score = 48.9 bits (115), Expect = 1e-05
 Identities = 20/23 (86%), Positives = 21/23 (91%)
 Frame = +3

Query: 1248 QQMWISKPEYDEAGPSICHRKCF 1316
            QQMWI+K EYDEAGPSI HRKCF
Sbjct: 355  QQMWITKQEYDEAGPSIVHRKCF 377


>ref|NP_001028790.1| actin, cytoplasmic 2 [Bos taurus].
          Length = 375

 Score =  680 bits (1754), Expect = 0.0
 Identities = 334/365 (91%), Positives = 344/365 (94%)
 Frame = +1

Query: 196  EEETTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 375
            EEE  ALV DNGSG+CKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2    EEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61

Query: 376  RGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREKMTQ 555
            RGILTLKYPIEHGI+TNWDDMEKIWHH+FYNELRVAPEEHP LLTEAPLNPKANREKMTQ
Sbjct: 62   RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 121

Query: 556  IMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLA 735
            IMFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVTH VPIYEGYALPHAI+RLDLA
Sbjct: 122  IMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 181

Query: 736  GRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYE 915
            GRDLTDYLMKILTERGYSF TTAEREIVRDIKEKLCYVALDFE EMATAASSSSLEKSYE
Sbjct: 182  GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 241

Query: 916  LPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSG 1095
            LPDGQVITIGNERFRCPE LFQPSF+GMES GIHETT+NSIMKCD+DIRKDLYAN VLSG
Sbjct: 242  LPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSG 301

Query: 1096 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFSRCGSASQS 1275
            GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF +   + Q 
Sbjct: 302  GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 361

Query: 1276 MTRQG 1290
                G
Sbjct: 362  YDESG 366



 Score = 48.9 bits (115), Expect = 1e-05
 Identities = 20/23 (86%), Positives = 21/23 (91%)
 Frame = +3

Query: 1248 QQMWISKPEYDEAGPSICHRKCF 1316
            QQMWISK EYDE+GPSI HRKCF
Sbjct: 353  QQMWISKQEYDESGPSIVHRKCF 375


>ref|NP_776404.2| actin, cytoplasmic 1 [Bos taurus].
          Length = 375

 Score =  676 bits (1745), Expect = 0.0
 Identities = 331/365 (90%), Positives = 344/365 (94%)
 Frame = +1

Query: 196  EEETTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 375
            +++  ALV DNGSG+CKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2    DDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61

Query: 376  RGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREKMTQ 555
            RGILTLKYPIEHGI+TNWDDMEKIWHH+FYNELRVAPEEHP LLTEAPLNPKANREKMTQ
Sbjct: 62   RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 121

Query: 556  IMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLA 735
            IMFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVTH VPIYEGYALPHAI+RLDLA
Sbjct: 122  IMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 181

Query: 736  GRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYE 915
            GRDLTDYLMKILTERGYSF TTAEREIVRDIKEKLCYVALDFE EMATAASSSSLEKSYE
Sbjct: 182  GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 241

Query: 916  LPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSG 1095
            LPDGQVITIGNERFRCPE LFQPSF+GMES GIHETT+NSIMKCD+DIRKDLYAN VLSG
Sbjct: 242  LPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSG 301

Query: 1096 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFSRCGSASQS 1275
            GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF +   + Q 
Sbjct: 302  GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 361

Query: 1276 MTRQG 1290
                G
Sbjct: 362  YDESG 366



 Score = 48.9 bits (115), Expect = 1e-05
 Identities = 20/23 (86%), Positives = 21/23 (91%)
 Frame = +3

Query: 1248 QQMWISKPEYDEAGPSICHRKCF 1316
            QQMWISK EYDE+GPSI HRKCF
Sbjct: 353  QQMWISKQEYDESGPSIVHRKCF 375


>ref|XP_002696363.1| PREDICTED: beta actin-like [Bos taurus].
          Length = 376

 Score =  657 bits (1696), Expect = 0.0
 Identities = 317/371 (85%), Positives = 342/371 (92%)
 Frame = +1

Query: 190  MCEEETTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 369
            M ++E +ALV DNGSG+CKAGF GDDAPRAVFPS+VGRPRHQGVMVGMGQKD YVGDEAQ
Sbjct: 1    MSDDELSALVVDNGSGMCKAGFGGDDAPRAVFPSMVGRPRHQGVMVGMGQKDCYVGDEAQ 60

Query: 370  SKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREKM 549
            SKRGILTLKYPIEHG++TNWDDMEKIWHH+FYNELRVAP+EHP LLTEAPLNPK NREKM
Sbjct: 61   SKRGILTLKYPIEHGVVTNWDDMEKIWHHTFYNELRVAPDEHPILLTEAPLNPKINREKM 120

Query: 550  TQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLD 729
            TQIMFE FN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVTH VPIYEGYALPHAI+RLD
Sbjct: 121  TQIMFEAFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLD 180

Query: 730  LAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKS 909
            LAGRDLTDYLMKILTERGYSF TTAEREIVRD+KEKLCYVALDFE EM + A+SSSLE+S
Sbjct: 181  LAGRDLTDYLMKILTERGYSFTTTAEREIVRDVKEKLCYVALDFEQEMVSTAASSSLERS 240

Query: 910  YELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVL 1089
            YELPDGQVITIGNERFRCPE +FQPSF+G+ES+GIHETT+NSIMKCD+DIRKDLYAN VL
Sbjct: 241  YELPDGQVITIGNERFRCPEAIFQPSFLGIESSGIHETTFNSIMKCDVDIRKDLYANTVL 300

Query: 1090 SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFSRCGSAS 1269
            SGG+TMYPGIA+RMQKEI ALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF +   + 
Sbjct: 301  SGGSTMYPGIAERMQKEIVALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK 360

Query: 1270 QSMTRQGLPFV 1302
            Q     G P V
Sbjct: 361  QEYDEAGPPIV 371


>ref|XP_001249299.2| PREDICTED: beta actin [Bos taurus].
          Length = 376

 Score =  657 bits (1696), Expect = 0.0
 Identities = 317/371 (85%), Positives = 342/371 (92%)
 Frame = +1

Query: 190  MCEEETTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 369
            M ++E +ALV DNGSG+CKAGF GDDAPRAVFPS+VGRPRHQGVMVGMGQKD YVGDEAQ
Sbjct: 1    MSDDELSALVVDNGSGMCKAGFGGDDAPRAVFPSMVGRPRHQGVMVGMGQKDCYVGDEAQ 60

Query: 370  SKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREKM 549
            SKRGILTLKYPIEHG++TNWDDMEKIWHH+FYNELRVAP+EHP LLTEAPLNPK NREKM
Sbjct: 61   SKRGILTLKYPIEHGVVTNWDDMEKIWHHTFYNELRVAPDEHPILLTEAPLNPKINREKM 120

Query: 550  TQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLD 729
            TQIMFE FN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVTH VPIYEGYALPHAI+RLD
Sbjct: 121  TQIMFEAFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLD 180

Query: 730  LAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKS 909
            LAGRDLTDYLMKILTERGYSF TTAEREIVRD+KEKLCYVALDFE EM + A+SSSLE+S
Sbjct: 181  LAGRDLTDYLMKILTERGYSFTTTAEREIVRDVKEKLCYVALDFEQEMVSTAASSSLERS 240

Query: 910  YELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVL 1089
            YELPDGQVITIGNERFRCPE +FQPSF+G+ES+GIHETT+NSIMKCD+DIRKDLYAN VL
Sbjct: 241  YELPDGQVITIGNERFRCPEAIFQPSFLGIESSGIHETTFNSIMKCDVDIRKDLYANTVL 300

Query: 1090 SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFSRCGSAS 1269
            SGG+TMYPGIA+RMQKEI ALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF +   + 
Sbjct: 301  SGGSTMYPGIAERMQKEIVALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK 360

Query: 1270 QSMTRQGLPFV 1302
            Q     G P V
Sbjct: 361  QEYDEAGPPIV 371


>ref|NP_001096808.1| beta-centractin [Bos taurus].
          Length = 376

 Score =  398 bits (1022), Expect = e-111
 Identities = 188/360 (52%), Positives = 259/360 (71%), Gaps = 1/360 (0%)
 Frame = +1

Query: 214  LVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 393
            +V DNGSG+ KAGFAGD  P+  FP+ VGRP+H  VM G  + D ++G +A+  RG+L +
Sbjct: 12   VVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHMRVMAGALEGDLFIGPKAEEHRGLLAI 71

Query: 394  KYPIEHGIITNWDDMEKIWHHSFY-NELRVAPEEHPTLLTEAPLNPKANREKMTQIMFET 570
            +YP+EHG++ +W+DME+IW + +  ++L+   EEHP LLTEAPLNP  NREK  ++ FET
Sbjct: 72   RYPMEHGVVRDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPSKNREKAAEVFFET 131

Query: 571  FNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLT 750
            FNVPA+++++QAVLSLYA+GRTTG+VLDSGDGVTH VP+YEG+A+PH+IMR+D+AGRD++
Sbjct: 132  FNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPVYEGFAMPHSIMRVDIAGRDVS 191

Query: 751  DYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQ 930
             YL  +L + G  F T+AE E+VR IKE+ CY++++ + + A        +  Y LPDG 
Sbjct: 192  RYLRLLLRKEGADFHTSAEFEVVRTIKERACYLSINPQKDEALETE----KVQYTLPDGS 247

Query: 931  VITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSGGTTMY 1110
             + +G  RFR PE LFQP  IG ES G+HE    +I K D+D+R+ L+AN +LSGG+T++
Sbjct: 248  TLNVGPARFRAPELLFQPDLIGDESEGLHEVLVFAIHKSDMDLRRTLFANIMLSGGSTLF 307

Query: 1111 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFSRCGSASQSMTRQG 1290
             G  DR+  E+  LAP  +KIKI AP ER YS WIGGSILASL TF +   + +     G
Sbjct: 308  KGFGDRLLSEVKKLAPKDVKIKISAPQERLYSTWIGGSILASLDTFKKMWVSKKEYEEDG 367


>ref|NP_001180177.1| alpha-centractin [Bos taurus].
          Length = 376

 Score =  394 bits (1013), Expect = e-110
 Identities = 187/360 (51%), Positives = 260/360 (72%), Gaps = 1/360 (0%)
 Frame = +1

Query: 214  LVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 393
            +V DNGSG+ KAGFAGD  P+  FP+ VGRP+H  VM G  + D ++G +A+  RG+L++
Sbjct: 12   VVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHVRVMAGALEGDIFIGPKAEEHRGLLSI 71

Query: 394  KYPIEHGIITNWDDMEKIWHHSFY-NELRVAPEEHPTLLTEAPLNPKANREKMTQIMFET 570
            +YP+EHGI+ +W+DME+IW + +  ++L+   EEHP LLTEAPLNP+ NRE+  ++ FET
Sbjct: 72   RYPMEHGIVKDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPRKNRERAAEVFFET 131

Query: 571  FNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLT 750
            FNVPA+++++QAVLSLYA+GRTTG+VLDSGDGVTH VPIYEG+A+PH+IMR+D+AGRD++
Sbjct: 132  FNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRIDIAGRDVS 191

Query: 751  DYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQ 930
             +L   L + GY F +++E EIV+ IKE+ CY++++ + +       +     Y LPDG 
Sbjct: 192  RFLRLYLRKEGYDFHSSSEFEIVKAIKERACYLSINPQKDETLETEKA----QYYLPDGS 247

Query: 931  VITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSGGTTMY 1110
             I IG  RFR PE LF+P  IG ES GIHE    +I K D+D+R+ L++N VLSGG+T++
Sbjct: 248  TIEIGPSRFRAPELLFRPDLIGEESEGIHEVLVFAIQKSDMDLRRTLFSNIVLSGGSTLF 307

Query: 1111 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFSRCGSASQSMTRQG 1290
             G  DR+  E+  LAP  +KI+I AP ER YS WIGGSILASL TF +   + +     G
Sbjct: 308  KGFGDRLLSEVKKLAPKDVKIRISAPQERLYSTWIGGSILASLDTFKKMWVSKKEYEEDG 367


  Database: RefSeq49_BP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 17,681,374
  Number of sequences in database:  33,088
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 51,227,325
Number of extensions: 1496007
Number of successful extensions: 6024
Number of sequences better than 1.0e-05: 39
Number of HSP's gapped: 5931
Number of HSP's successfully gapped: 56
Length of query: 439
Length of database: 17,681,374
Length adjustment: 105
Effective length of query: 334
Effective length of database: 14,207,134
Effective search space: 4745182756
Effective search space used: 4745182756
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-001620
         (1318 letters)

Database: RefSeq49_CP.fasta 
           33,336 sequences; 18,874,504 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_533002.2| PREDICTED: similar to Actin, gamma-enteric smoo...   714   0.0  
Alignment   gi|XP_534781.2| PREDICTED: similar to Actin, aortic smooth musc...   709   0.0  
Alignment   gi|XP_535424.1| PREDICTED: similar to Actin, alpha cardiac (Alp...   704   0.0  
Alignment   gi|NP_001182774.1| actin, cytoplasmic 1 [Canis lupus familiaris].    674   0.0  
Alignment   gi|XP_533132.2| PREDICTED: hypothetical protein XP_533132 [Cani...   674   0.0  
Alignment   gi|XP_861856.1| PREDICTED: similar to cytoplasmic beta-actin is...   664   0.0  
Alignment   gi|XP_544346.1| PREDICTED: similar to Actin, cytoplasmic 1 (Bet...   656   0.0  
Alignment   gi|NP_001003349.1| beta-actin-like [Canis lupus familiaris].         629   e-180
Alignment   gi|XP_536888.2| PREDICTED: similar to cytoplasmic beta-actin is...   625   e-179
Alignment   gi|XP_536230.2| PREDICTED: similar to cytoplasmic beta-actin [C...   615   e-176

>ref|XP_533002.2| PREDICTED: similar to Actin, gamma-enteric smooth muscle (Smooth
            muscle gamma actin) (Alpha-actin 3) [Canis familiaris].
          Length = 376

 Score =  714 bits (1842), Expect(2) = 0.0
 Identities = 353/355 (99%), Positives = 354/355 (99%)
 Frame = +1

Query: 190  MCEEETTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 369
            MCEEETTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1    MCEEETTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 370  SKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREKM 549
            SKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREKM
Sbjct: 61   SKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREKM 120

Query: 550  TQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLD 729
            TQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLD
Sbjct: 121  TQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLD 180

Query: 730  LAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKS 909
            LAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKS
Sbjct: 181  LAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKS 240

Query: 910  YELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVL 1089
            YELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVL
Sbjct: 241  YELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVL 300

Query: 1090 SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFSR 1254
            SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF +
Sbjct: 301  SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQ 355



 Score = 53.1 bits (126), Expect(2) = 0.0
 Identities = 22/23 (95%), Positives = 22/23 (95%)
 Frame = +3

Query: 1248 QQMWISKPEYDEAGPSICHRKCF 1316
            QQMWISKPEYDEAGPSI HRKCF
Sbjct: 354  QQMWISKPEYDEAGPSIVHRKCF 376


>ref|XP_534781.2| PREDICTED: similar to Actin, aortic smooth muscle (Alpha-actin 2)
            [Canis familiaris].
          Length = 377

 Score =  709 bits (1830), Expect = 0.0
 Identities = 354/368 (96%), Positives = 357/368 (97%), Gaps = 1/368 (0%)
 Frame = +1

Query: 190  MCEEE-TTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA 366
            MCEEE +TALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
Sbjct: 1    MCEEEDSTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA 60

Query: 367  QSKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREK 546
            QSKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREK
Sbjct: 61   QSKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREK 120

Query: 547  MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRL 726
            MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRL
Sbjct: 121  MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRL 180

Query: 727  DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEK 906
            DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEK
Sbjct: 181  DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEK 240

Query: 907  SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNV 1086
            SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNV
Sbjct: 241  SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNV 300

Query: 1087 LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFSRCGSA 1266
            LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF +   +
Sbjct: 301  LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 360

Query: 1267 SQSMTRQG 1290
             Q     G
Sbjct: 361  KQEYDEAG 368



 Score = 50.1 bits (118), Expect = 5e-06
 Identities = 21/23 (91%), Positives = 21/23 (91%)
 Frame = +3

Query: 1248 QQMWISKPEYDEAGPSICHRKCF 1316
            QQMWISK EYDEAGPSI HRKCF
Sbjct: 355  QQMWISKQEYDEAGPSIVHRKCF 377


>ref|XP_535424.1| PREDICTED: similar to Actin, alpha cardiac (Alpha-cardiac actin)
            isoform 3 [Canis familiaris].
          Length = 377

 Score =  704 bits (1818), Expect = 0.0
 Identities = 352/368 (95%), Positives = 356/368 (96%), Gaps = 1/368 (0%)
 Frame = +1

Query: 190  MCE-EETTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA 366
            MC+ EETTALVCDNGSGL KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
Sbjct: 1    MCDDEETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA 60

Query: 367  QSKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREK 546
            QSKRGILTLKYPIEHGIITNWDDMEKIWHH+FYNELRVAPEEHPTLLTEAPLNPKANREK
Sbjct: 61   QSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREK 120

Query: 547  MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRL 726
            MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRL
Sbjct: 121  MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRL 180

Query: 727  DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEK 906
            DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEK
Sbjct: 181  DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEK 240

Query: 907  SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNV 1086
            SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNV
Sbjct: 241  SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNV 300

Query: 1087 LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFSRCGSA 1266
            LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF +   +
Sbjct: 301  LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 360

Query: 1267 SQSMTRQG 1290
             Q     G
Sbjct: 361  KQEYDEAG 368



 Score = 50.1 bits (118), Expect = 5e-06
 Identities = 21/23 (91%), Positives = 21/23 (91%)
 Frame = +3

Query: 1248 QQMWISKPEYDEAGPSICHRKCF 1316
            QQMWISK EYDEAGPSI HRKCF
Sbjct: 355  QQMWISKQEYDEAGPSIVHRKCF 377


>ref|NP_001182774.1| actin, cytoplasmic 1 [Canis lupus familiaris].
          Length = 375

 Score =  674 bits (1739), Expect = 0.0
 Identities = 330/365 (90%), Positives = 343/365 (93%)
 Frame = +1

Query: 196  EEETTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 375
            +++  ALV DNGSG+CKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2    DDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61

Query: 376  RGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREKMTQ 555
            RGILTLKYPIEHGI+TNWDDMEKIWHH+FYNELRVAPEEHP LLTEAPLNPKANREKMTQ
Sbjct: 62   RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 121

Query: 556  IMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLA 735
            IMFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVTH VPIYEGYALPHAI+RLDLA
Sbjct: 122  IMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 181

Query: 736  GRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYE 915
            GRDLTDYLMKILTERGYSF TTAEREIVRDIKEKLCYVALDFE EMATAASSSSLEKSYE
Sbjct: 182  GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 241

Query: 916  LPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSG 1095
            LPDGQVITIGNERFRCPE LFQPSF+ MES GIHETT+NSIMKCD+DIRKDLYAN VLSG
Sbjct: 242  LPDGQVITIGNERFRCPEALFQPSFLSMESCGIHETTFNSIMKCDVDIRKDLYANTVLSG 301

Query: 1096 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFSRCGSASQS 1275
            GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF +   + Q 
Sbjct: 302  GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 361

Query: 1276 MTRQG 1290
                G
Sbjct: 362  YDESG 366


>ref|XP_533132.2| PREDICTED: hypothetical protein XP_533132 [Canis familiaris].
          Length = 375

 Score =  674 bits (1739), Expect = 0.0
 Identities = 331/365 (90%), Positives = 342/365 (93%)
 Frame = +1

Query: 196  EEETTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 375
            EEE  ALV DNGSG+CKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2    EEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61

Query: 376  RGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREKMTQ 555
            RGILTLKYPIEHGI+TNW+DMEKIWHH+FYNELRVAPEEHP LLTEAPLNPK N EKMTQ
Sbjct: 62   RGILTLKYPIEHGIVTNWEDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKTNGEKMTQ 121

Query: 556  IMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLA 735
            IMFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVTH VPIYEGYALPHAI+RLDLA
Sbjct: 122  IMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 181

Query: 736  GRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYE 915
            GRDLTDYLMKILTERGYSF TTAEREIVRDIKEKLCYVALDFE EMATAASSSSLEKSYE
Sbjct: 182  GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 241

Query: 916  LPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSG 1095
            LPDGQVITIGNERFRCPE LFQPSF+GMES GIHETT+NSIMKCD+DIRKDLYAN VLSG
Sbjct: 242  LPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSG 301

Query: 1096 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFSRCGSASQS 1275
            GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF +   + Q 
Sbjct: 302  GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 361

Query: 1276 MTRQG 1290
                G
Sbjct: 362  YDESG 366


>ref|XP_861856.1| PREDICTED: similar to cytoplasmic beta-actin isoform 9 [Canis
            familiaris].
          Length = 376

 Score =  664 bits (1712), Expect = 0.0
 Identities = 328/366 (89%), Positives = 341/366 (93%), Gaps = 1/366 (0%)
 Frame = +1

Query: 196  EEETTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 375
            +++  ALV DNGSG+CKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2    DDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61

Query: 376  RGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREKMTQ 555
            RGILTLKYPIEHGI+TNWDDMEKIWHH+FYNELRVAPEEHP LLTEAPLNPKANREKMTQ
Sbjct: 62   RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 121

Query: 556  IMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLA 735
            IMFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVTH VPIYEGYALPHAI+RLDLA
Sbjct: 122  IMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 181

Query: 736  GRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYE 915
            GRDLTDYLMKILTERGYSF TTAEREIVRDIKEKLCYVALDFE EMATAASSSSLEKSYE
Sbjct: 182  GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 241

Query: 916  LPDGQVITIGNERFRCPETLFQPSFI-GMESAGIHETTYNSIMKCDIDIRKDLYANNVLS 1092
            LPDGQVITIGNERFRCPE LF   F+ GMES GIHETT+NSIMKCD+DIRKDLYAN VLS
Sbjct: 242  LPDGQVITIGNERFRCPEALFHFCFLPGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS 301

Query: 1093 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFSRCGSASQ 1272
            GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF +   + Q
Sbjct: 302  GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 361

Query: 1273 SMTRQG 1290
                 G
Sbjct: 362  EYDESG 367


>ref|XP_544346.1| PREDICTED: similar to Actin, cytoplasmic 1 (Beta-actin 1) [Canis
            familiaris].
          Length = 376

 Score =  656 bits (1692), Expect = 0.0
 Identities = 316/371 (85%), Positives = 343/371 (92%)
 Frame = +1

Query: 190  MCEEETTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 369
            M ++E +ALV DNGSG+CKAGF GDDAPRAVFPS+VGRPRHQGVMVGMGQKD YVGDEAQ
Sbjct: 1    MTDDELSALVVDNGSGMCKAGFGGDDAPRAVFPSMVGRPRHQGVMVGMGQKDCYVGDEAQ 60

Query: 370  SKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREKM 549
            SKRGILTLKYPIEHG++TNWDDMEKIWHH+FYNELRVAP+EHP LLTEAPLNPK NREKM
Sbjct: 61   SKRGILTLKYPIEHGVVTNWDDMEKIWHHTFYNELRVAPDEHPILLTEAPLNPKINREKM 120

Query: 550  TQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLD 729
            TQIMFE FN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVTH VPIYEGYALPHAI+RLD
Sbjct: 121  TQIMFEAFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLD 180

Query: 730  LAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKS 909
            LAGRDLTDYLMKILTERGY+F TTAEREIVRD+KEKLCYVALDFE EM +AA+SSSLE+S
Sbjct: 181  LAGRDLTDYLMKILTERGYNFTTTAEREIVRDVKEKLCYVALDFEQEMGSAAASSSLERS 240

Query: 910  YELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVL 1089
            YELPDGQVIT+GNERFRCPE++FQPSF+G+ES+GIHETT+NSIMKCD+DIRKDLYAN VL
Sbjct: 241  YELPDGQVITLGNERFRCPESIFQPSFLGIESSGIHETTFNSIMKCDVDIRKDLYANIVL 300

Query: 1090 SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFSRCGSAS 1269
            SGG+TMYPGIADRMQKEI  LAPSTMKIKIIAPPERKYSVWIGGSILASLSTF +   + 
Sbjct: 301  SGGSTMYPGIADRMQKEIMTLAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK 360

Query: 1270 QSMTRQGLPFV 1302
            Q     G P V
Sbjct: 361  QEYDEAGPPIV 371


>ref|NP_001003349.1| beta-actin-like [Canis lupus familiaris].
          Length = 375

 Score =  629 bits (1621), Expect = e-180
 Identities = 312/365 (85%), Positives = 327/365 (89%)
 Frame = +1

Query: 196  EEETTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 375
            ++E  ALV DNGSG+CKAGFAGDDAPRAVFPSIVGRPRHQGVMV MGQKDSYVGDEAQSK
Sbjct: 2    DDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVRMGQKDSYVGDEAQSK 61

Query: 376  RGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREKMTQ 555
            RGILTLKYPIEHGI+TNWDDMEKIWHH+FYNELRVAPEE P LLTEAPLNPKANREKMTQ
Sbjct: 62   RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEAPVLLTEAPLNPKANREKMTQ 121

Query: 556  IMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLA 735
            IMFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVTH VPIYEGYALPHAI+RLDLA
Sbjct: 122  IMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 181

Query: 736  GRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYE 915
            GRDLTDYLMKILTERGYSF TTAEREIVRDIKE+               ASSSSLEKSYE
Sbjct: 182  GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEEALLRRPGLRAGDGHGASSSSLEKSYE 241

Query: 916  LPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSG 1095
            LPDGQVITIGNERFRCP+ LFQPSF+GMES GIHETT+NSIMKCD+DIRKDLYAN VLSG
Sbjct: 242  LPDGQVITIGNERFRCPKALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSG 301

Query: 1096 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFSRCGSASQS 1275
            GTTMYPGIADRMQKEITALAP+ MKIKIIAPPERKYSVWIGGSILASLSTF +   + Q 
Sbjct: 302  GTTMYPGIADRMQKEITALAPARMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 361

Query: 1276 MTRQG 1290
                G
Sbjct: 362  YDESG 366


>ref|XP_536888.2| PREDICTED: similar to cytoplasmic beta-actin isoform 1 [Canis
            familiaris].
          Length = 361

 Score =  625 bits (1611), Expect = e-179
 Identities = 314/365 (86%), Positives = 326/365 (89%)
 Frame = +1

Query: 196  EEETTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 375
            +++  ALV DNGSG+CKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2    DDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61

Query: 376  RGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREKMTQ 555
            RGILTLKYPIEHGI+TNWDDMEKIWHH+FYNELRVAPEEHP LLTEAPLNPKANREKMTQ
Sbjct: 62   RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 121

Query: 556  IMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLA 735
            IMFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVTH VPIYEGYALPHAI+RLDLA
Sbjct: 122  IMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 181

Query: 736  GRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYE 915
            GRDLTDYLMKILTERGYSF TTAEREIVRDIKEKLCYVALDFE EMATAASSSSLEKSYE
Sbjct: 182  GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 241

Query: 916  LPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSG 1095
            LPDGQ               F P   GMES GIHETT+NSIMKCD+DIRKDLYAN VLSG
Sbjct: 242  LPDGQ-----------SSFCFLP---GMESCGIHETTFNSIMKCDVDIRKDLYANTVLSG 287

Query: 1096 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFSRCGSASQS 1275
            GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF +   + Q 
Sbjct: 288  GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 347

Query: 1276 MTRQG 1290
                G
Sbjct: 348  YDESG 352


>ref|XP_536230.2| PREDICTED: similar to cytoplasmic beta-actin [Canis familiaris].
          Length = 389

 Score =  615 bits (1585), Expect = e-176
 Identities = 303/334 (90%), Positives = 312/334 (93%)
 Frame = +1

Query: 289  SIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHSFYN 468
            SIVGRPRH GVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHH+FYN
Sbjct: 47   SIVGRPRHPGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYN 106

Query: 469  ELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIV 648
            EL VAPEEHP LLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYASGRTTGIV
Sbjct: 107  ELGVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 166

Query: 649  LDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDI 828
            +DS DGVTH VPIYEGYALPHAI+RLDLAGRDLTDYLMKILTERGYSF T AEREIVRDI
Sbjct: 167  MDSSDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTIAEREIVRDI 226

Query: 829  KEKLCYVALDFENEMATAASSSSLEKSYELPDGQVITIGNERFRCPETLFQPSFIGMESA 1008
            KEKLCYVALDFE EMATAASSSSLEKSYELPDGQVITIGNERFRCPE LFQPSF+GMES 
Sbjct: 227  KEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESC 286

Query: 1009 GIHETTYNSIMKCDIDIRKDLYANNVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP 1188
            GIHETT+NSIMKCD+DIRKDLYAN VLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP
Sbjct: 287  GIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP 346

Query: 1189 PERKYSVWIGGSILASLSTFSRCGSASQSMTRQG 1290
            PERKYSVWIGGSILASLSTF +   + Q     G
Sbjct: 347  PERKYSVWIGGSILASLSTFQQMWISKQEYDESG 380


  Database: RefSeq49_CP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,874,504
  Number of sequences in database:  33,336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 53,479,094
Number of extensions: 1542610
Number of successful extensions: 5973
Number of sequences better than 1.0e-05: 55
Number of HSP's gapped: 5880
Number of HSP's successfully gapped: 70
Length of query: 439
Length of database: 18,874,504
Length adjustment: 106
Effective length of query: 333
Effective length of database: 15,340,888
Effective search space: 5108515704
Effective search space used: 5108515704
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-001620
         (1318 letters)

Database: RefSeq49_HP.fasta 
           32,964 sequences; 18,297,164 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001606.1| actin, gamma-enteric smooth muscle isoform 1 pr...   714   0.0  
Alignment   gi|NP_001604.1| actin, aortic smooth muscle [Homo sapiens].          709   0.0  
Alignment   gi|NP_001135417.1| actin, aortic smooth muscle [Homo sapiens].       709   0.0  
Alignment   gi|NP_005150.1| actin, alpha cardiac muscle 1 proprotein [Homo ...   704   0.0  
Alignment   gi|NP_001091.1| actin, alpha skeletal muscle [Homo sapiens].         703   0.0  
Alignment   gi|NP_001186883.1| actin, cytoplasmic 2 [Homo sapiens].              680   0.0  
Alignment   gi|NP_001605.1| actin, cytoplasmic 2 [Homo sapiens].                 680   0.0  
Alignment   gi|NP_001092.1| actin, cytoplasmic 1 [Homo sapiens].                 676   0.0  
Alignment   gi|NP_001017992.1| beta-actin-like protein 2 [Homo sapiens].         649   0.0  
Alignment   gi|NP_001186822.1| actin, gamma-enteric smooth muscle isoform 2...   605   0.0  

>ref|NP_001606.1| actin, gamma-enteric smooth muscle isoform 1 precursor [Homo
            sapiens].
          Length = 376

 Score =  714 bits (1842), Expect(2) = 0.0
 Identities = 353/355 (99%), Positives = 354/355 (99%)
 Frame = +1

Query: 190  MCEEETTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 369
            MCEEETTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1    MCEEETTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 370  SKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREKM 549
            SKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREKM
Sbjct: 61   SKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREKM 120

Query: 550  TQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLD 729
            TQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLD
Sbjct: 121  TQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLD 180

Query: 730  LAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKS 909
            LAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKS
Sbjct: 181  LAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKS 240

Query: 910  YELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVL 1089
            YELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVL
Sbjct: 241  YELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVL 300

Query: 1090 SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFSR 1254
            SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF +
Sbjct: 301  SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQ 355



 Score = 53.1 bits (126), Expect(2) = 0.0
 Identities = 22/23 (95%), Positives = 22/23 (95%)
 Frame = +3

Query: 1248 QQMWISKPEYDEAGPSICHRKCF 1316
            QQMWISKPEYDEAGPSI HRKCF
Sbjct: 354  QQMWISKPEYDEAGPSIVHRKCF 376


>ref|NP_001604.1| actin, aortic smooth muscle [Homo sapiens].
          Length = 377

 Score =  709 bits (1830), Expect = 0.0
 Identities = 354/368 (96%), Positives = 357/368 (97%), Gaps = 1/368 (0%)
 Frame = +1

Query: 190  MCEEE-TTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA 366
            MCEEE +TALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
Sbjct: 1    MCEEEDSTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA 60

Query: 367  QSKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREK 546
            QSKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREK
Sbjct: 61   QSKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREK 120

Query: 547  MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRL 726
            MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRL
Sbjct: 121  MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRL 180

Query: 727  DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEK 906
            DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEK
Sbjct: 181  DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEK 240

Query: 907  SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNV 1086
            SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNV
Sbjct: 241  SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNV 300

Query: 1087 LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFSRCGSA 1266
            LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF +   +
Sbjct: 301  LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 360

Query: 1267 SQSMTRQG 1290
             Q     G
Sbjct: 361  KQEYDEAG 368



 Score = 50.1 bits (118), Expect = 5e-06
 Identities = 21/23 (91%), Positives = 21/23 (91%)
 Frame = +3

Query: 1248 QQMWISKPEYDEAGPSICHRKCF 1316
            QQMWISK EYDEAGPSI HRKCF
Sbjct: 355  QQMWISKQEYDEAGPSIVHRKCF 377


>ref|NP_001135417.1| actin, aortic smooth muscle [Homo sapiens].
          Length = 377

 Score =  709 bits (1830), Expect = 0.0
 Identities = 354/368 (96%), Positives = 357/368 (97%), Gaps = 1/368 (0%)
 Frame = +1

Query: 190  MCEEE-TTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA 366
            MCEEE +TALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
Sbjct: 1    MCEEEDSTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA 60

Query: 367  QSKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREK 546
            QSKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREK
Sbjct: 61   QSKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREK 120

Query: 547  MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRL 726
            MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRL
Sbjct: 121  MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRL 180

Query: 727  DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEK 906
            DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEK
Sbjct: 181  DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEK 240

Query: 907  SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNV 1086
            SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNV
Sbjct: 241  SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNV 300

Query: 1087 LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFSRCGSA 1266
            LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF +   +
Sbjct: 301  LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 360

Query: 1267 SQSMTRQG 1290
             Q     G
Sbjct: 361  KQEYDEAG 368



 Score = 50.1 bits (118), Expect = 5e-06
 Identities = 21/23 (91%), Positives = 21/23 (91%)
 Frame = +3

Query: 1248 QQMWISKPEYDEAGPSICHRKCF 1316
            QQMWISK EYDEAGPSI HRKCF
Sbjct: 355  QQMWISKQEYDEAGPSIVHRKCF 377


>ref|NP_005150.1| actin, alpha cardiac muscle 1 proprotein [Homo sapiens].
          Length = 377

 Score =  704 bits (1818), Expect = 0.0
 Identities = 352/368 (95%), Positives = 356/368 (96%), Gaps = 1/368 (0%)
 Frame = +1

Query: 190  MCE-EETTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA 366
            MC+ EETTALVCDNGSGL KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
Sbjct: 1    MCDDEETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA 60

Query: 367  QSKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREK 546
            QSKRGILTLKYPIEHGIITNWDDMEKIWHH+FYNELRVAPEEHPTLLTEAPLNPKANREK
Sbjct: 61   QSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREK 120

Query: 547  MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRL 726
            MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRL
Sbjct: 121  MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRL 180

Query: 727  DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEK 906
            DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEK
Sbjct: 181  DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEK 240

Query: 907  SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNV 1086
            SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNV
Sbjct: 241  SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNV 300

Query: 1087 LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFSRCGSA 1266
            LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF +   +
Sbjct: 301  LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 360

Query: 1267 SQSMTRQG 1290
             Q     G
Sbjct: 361  KQEYDEAG 368



 Score = 50.1 bits (118), Expect = 5e-06
 Identities = 21/23 (91%), Positives = 21/23 (91%)
 Frame = +3

Query: 1248 QQMWISKPEYDEAGPSICHRKCF 1316
            QQMWISK EYDEAGPSI HRKCF
Sbjct: 355  QQMWISKQEYDEAGPSIVHRKCF 377


>ref|NP_001091.1| actin, alpha skeletal muscle [Homo sapiens].
          Length = 377

 Score =  703 bits (1815), Expect = 0.0
 Identities = 351/368 (95%), Positives = 355/368 (96%), Gaps = 1/368 (0%)
 Frame = +1

Query: 190  MCEE-ETTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA 366
            MC+E ETTALVCDNGSGL KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
Sbjct: 1    MCDEDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA 60

Query: 367  QSKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREK 546
            QSKRGILTLKYPIEHGIITNWDDMEKIWHH+FYNELRVAPEEHPTLLTEAPLNPKANREK
Sbjct: 61   QSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREK 120

Query: 547  MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRL 726
            MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRL
Sbjct: 121  MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRL 180

Query: 727  DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEK 906
            DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEK
Sbjct: 181  DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEK 240

Query: 907  SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNV 1086
            SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNV
Sbjct: 241  SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNV 300

Query: 1087 LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFSRCGSA 1266
            +SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF +    
Sbjct: 301  MSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIT 360

Query: 1267 SQSMTRQG 1290
             Q     G
Sbjct: 361  KQEYDEAG 368


>ref|NP_001186883.1| actin, cytoplasmic 2 [Homo sapiens].
          Length = 375

 Score =  680 bits (1754), Expect = 0.0
 Identities = 334/365 (91%), Positives = 344/365 (94%)
 Frame = +1

Query: 196  EEETTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 375
            EEE  ALV DNGSG+CKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2    EEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61

Query: 376  RGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREKMTQ 555
            RGILTLKYPIEHGI+TNWDDMEKIWHH+FYNELRVAPEEHP LLTEAPLNPKANREKMTQ
Sbjct: 62   RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 121

Query: 556  IMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLA 735
            IMFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVTH VPIYEGYALPHAI+RLDLA
Sbjct: 122  IMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 181

Query: 736  GRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYE 915
            GRDLTDYLMKILTERGYSF TTAEREIVRDIKEKLCYVALDFE EMATAASSSSLEKSYE
Sbjct: 182  GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 241

Query: 916  LPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSG 1095
            LPDGQVITIGNERFRCPE LFQPSF+GMES GIHETT+NSIMKCD+DIRKDLYAN VLSG
Sbjct: 242  LPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSG 301

Query: 1096 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFSRCGSASQS 1275
            GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF +   + Q 
Sbjct: 302  GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 361

Query: 1276 MTRQG 1290
                G
Sbjct: 362  YDESG 366


>ref|NP_001605.1| actin, cytoplasmic 2 [Homo sapiens].
          Length = 375

 Score =  680 bits (1754), Expect = 0.0
 Identities = 334/365 (91%), Positives = 344/365 (94%)
 Frame = +1

Query: 196  EEETTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 375
            EEE  ALV DNGSG+CKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2    EEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61

Query: 376  RGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREKMTQ 555
            RGILTLKYPIEHGI+TNWDDMEKIWHH+FYNELRVAPEEHP LLTEAPLNPKANREKMTQ
Sbjct: 62   RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 121

Query: 556  IMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLA 735
            IMFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVTH VPIYEGYALPHAI+RLDLA
Sbjct: 122  IMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 181

Query: 736  GRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYE 915
            GRDLTDYLMKILTERGYSF TTAEREIVRDIKEKLCYVALDFE EMATAASSSSLEKSYE
Sbjct: 182  GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 241

Query: 916  LPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSG 1095
            LPDGQVITIGNERFRCPE LFQPSF+GMES GIHETT+NSIMKCD+DIRKDLYAN VLSG
Sbjct: 242  LPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSG 301

Query: 1096 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFSRCGSASQS 1275
            GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF +   + Q 
Sbjct: 302  GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 361

Query: 1276 MTRQG 1290
                G
Sbjct: 362  YDESG 366


>ref|NP_001092.1| actin, cytoplasmic 1 [Homo sapiens].
          Length = 375

 Score =  676 bits (1745), Expect = 0.0
 Identities = 331/365 (90%), Positives = 344/365 (94%)
 Frame = +1

Query: 196  EEETTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 375
            +++  ALV DNGSG+CKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2    DDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61

Query: 376  RGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREKMTQ 555
            RGILTLKYPIEHGI+TNWDDMEKIWHH+FYNELRVAPEEHP LLTEAPLNPKANREKMTQ
Sbjct: 62   RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 121

Query: 556  IMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLA 735
            IMFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVTH VPIYEGYALPHAI+RLDLA
Sbjct: 122  IMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 181

Query: 736  GRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYE 915
            GRDLTDYLMKILTERGYSF TTAEREIVRDIKEKLCYVALDFE EMATAASSSSLEKSYE
Sbjct: 182  GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 241

Query: 916  LPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSG 1095
            LPDGQVITIGNERFRCPE LFQPSF+GMES GIHETT+NSIMKCD+DIRKDLYAN VLSG
Sbjct: 242  LPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSG 301

Query: 1096 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFSRCGSASQS 1275
            GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF +   + Q 
Sbjct: 302  GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 361

Query: 1276 MTRQG 1290
                G
Sbjct: 362  YDESG 366


>ref|NP_001017992.1| beta-actin-like protein 2 [Homo sapiens].
          Length = 376

 Score =  649 bits (1674), Expect = 0.0
 Identities = 313/371 (84%), Positives = 339/371 (91%)
 Frame = +1

Query: 190  MCEEETTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 369
            M + E +ALV DNGSG+CKAGF GDDAPRAVFPS++GRPRHQGVMVGMGQKD YVGDEAQ
Sbjct: 1    MTDNELSALVVDNGSGMCKAGFGGDDAPRAVFPSMIGRPRHQGVMVGMGQKDCYVGDEAQ 60

Query: 370  SKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREKM 549
            SKRG+LTLKYPIEHG++TNWDDMEKIW+H+FYNELRVAP+EHP LLTEAPLNPK NREKM
Sbjct: 61   SKRGVLTLKYPIEHGVVTNWDDMEKIWYHTFYNELRVAPDEHPILLTEAPLNPKINREKM 120

Query: 550  TQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLD 729
            TQIMFE FN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVTH VPIYEGYALPHAI+RLD
Sbjct: 121  TQIMFEAFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHIVPIYEGYALPHAILRLD 180

Query: 730  LAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKS 909
            LAGRDLTDYLMKILTERGY+F TTAEREIVRD+KEKLCYVALDFE EM  AA+SSS E+S
Sbjct: 181  LAGRDLTDYLMKILTERGYNFTTTAEREIVRDVKEKLCYVALDFEQEMVRAAASSSPERS 240

Query: 910  YELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVL 1089
            YELPDGQVITIGNERFRCPE +FQPSF+G+ES+GIHETT+NSIMKCD+DIRKDLYAN VL
Sbjct: 241  YELPDGQVITIGNERFRCPEAIFQPSFLGIESSGIHETTFNSIMKCDVDIRKDLYANTVL 300

Query: 1090 SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFSRCGSAS 1269
            SGG+TMYPGIADRMQKEI  LAPSTMKIKIIAPPERKYSVWIGGSILASLSTF +   + 
Sbjct: 301  SGGSTMYPGIADRMQKEIITLAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK 360

Query: 1270 QSMTRQGLPFV 1302
            Q     G P V
Sbjct: 361  QEYDEAGPPIV 371


>ref|NP_001186822.1| actin, gamma-enteric smooth muscle isoform 2 precursor [Homo
            sapiens].
          Length = 333

 Score =  605 bits (1559), Expect(2) = 0.0
 Identities = 310/355 (87%), Positives = 311/355 (87%)
 Frame = +1

Query: 190  MCEEETTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 369
            MCEEETTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQ                  
Sbjct: 1    MCEEETTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQ------------------ 42

Query: 370  SKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREKM 549
                                     IWHHSFYNELRVAPEEHPTLLTEAPLNPKANREKM
Sbjct: 43   -------------------------IWHHSFYNELRVAPEEHPTLLTEAPLNPKANREKM 77

Query: 550  TQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLD 729
            TQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLD
Sbjct: 78   TQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLD 137

Query: 730  LAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKS 909
            LAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKS
Sbjct: 138  LAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKS 197

Query: 910  YELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVL 1089
            YELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVL
Sbjct: 198  YELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVL 257

Query: 1090 SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFSR 1254
            SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF +
Sbjct: 258  SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQ 312



 Score = 53.1 bits (126), Expect(2) = 0.0
 Identities = 22/23 (95%), Positives = 22/23 (95%)
 Frame = +3

Query: 1248 QQMWISKPEYDEAGPSICHRKCF 1316
            QQMWISKPEYDEAGPSI HRKCF
Sbjct: 311  QQMWISKPEYDEAGPSIVHRKCF 333


  Database: RefSeq49_HP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,297,164
  Number of sequences in database:  32,964
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 52,486,071
Number of extensions: 1516200
Number of successful extensions: 6002
Number of sequences better than 1.0e-05: 38
Number of HSP's gapped: 5912
Number of HSP's successfully gapped: 52
Length of query: 439
Length of database: 18,297,164
Length adjustment: 106
Effective length of query: 333
Effective length of database: 14,802,980
Effective search space: 4929392340
Effective search space used: 4929392340
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-001620
         (1318 letters)

Database: RefSeq49_MP.fasta 
           30,036 sequences; 15,617,559 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_033740.2| actin, gamma-enteric smooth muscle [Mus musculu...   714   0.0  
Alignment   gi|NP_031418.1| actin, aortic smooth muscle [Mus musculus].          709   0.0  
Alignment   gi|NP_033738.1| actin, alpha cardiac muscle 1 [Mus musculus].        704   0.0  
Alignment   gi|NP_033736.1| actin, alpha skeletal muscle [Mus musculus].         703   0.0  
Alignment   gi|XP_003084637.1| PREDICTED: actin, cytoplasmic 2-like [Mus mu...   680   0.0  
Alignment   gi|NP_033739.1| actin, cytoplasmic 2 [Mus musculus].                 680   0.0  
Alignment   gi|NP_031419.1| actin, cytoplasmic 1 [Mus musculus].                 676   0.0  
Alignment   gi|NP_780706.1| beta-actin-like protein 2 [Mus musculus].            656   0.0  
Alignment   gi|XP_003086416.1| PREDICTED: actin, cytoplasmic 2-like [Mus mu...   401   e-112
Alignment   gi|NP_666219.1| beta-centractin [Mus musculus].                      399   e-111

>ref|NP_033740.2| actin, gamma-enteric smooth muscle [Mus musculus].
          Length = 376

 Score =  714 bits (1842), Expect(2) = 0.0
 Identities = 353/355 (99%), Positives = 354/355 (99%)
 Frame = +1

Query: 190  MCEEETTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 369
            MCEEETTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1    MCEEETTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 370  SKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREKM 549
            SKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREKM
Sbjct: 61   SKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREKM 120

Query: 550  TQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLD 729
            TQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLD
Sbjct: 121  TQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLD 180

Query: 730  LAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKS 909
            LAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKS
Sbjct: 181  LAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKS 240

Query: 910  YELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVL 1089
            YELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVL
Sbjct: 241  YELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVL 300

Query: 1090 SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFSR 1254
            SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF +
Sbjct: 301  SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQ 355



 Score = 53.1 bits (126), Expect(2) = 0.0
 Identities = 22/23 (95%), Positives = 22/23 (95%)
 Frame = +3

Query: 1248 QQMWISKPEYDEAGPSICHRKCF 1316
            QQMWISKPEYDEAGPSI HRKCF
Sbjct: 354  QQMWISKPEYDEAGPSIVHRKCF 376


>ref|NP_031418.1| actin, aortic smooth muscle [Mus musculus].
          Length = 377

 Score =  709 bits (1830), Expect = 0.0
 Identities = 354/368 (96%), Positives = 357/368 (97%), Gaps = 1/368 (0%)
 Frame = +1

Query: 190  MCEEE-TTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA 366
            MCEEE +TALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
Sbjct: 1    MCEEEDSTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA 60

Query: 367  QSKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREK 546
            QSKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREK
Sbjct: 61   QSKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREK 120

Query: 547  MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRL 726
            MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRL
Sbjct: 121  MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRL 180

Query: 727  DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEK 906
            DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEK
Sbjct: 181  DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEK 240

Query: 907  SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNV 1086
            SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNV
Sbjct: 241  SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNV 300

Query: 1087 LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFSRCGSA 1266
            LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF +   +
Sbjct: 301  LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 360

Query: 1267 SQSMTRQG 1290
             Q     G
Sbjct: 361  KQEYDEAG 368



 Score = 50.1 bits (118), Expect = 4e-06
 Identities = 21/23 (91%), Positives = 21/23 (91%)
 Frame = +3

Query: 1248 QQMWISKPEYDEAGPSICHRKCF 1316
            QQMWISK EYDEAGPSI HRKCF
Sbjct: 355  QQMWISKQEYDEAGPSIVHRKCF 377


>ref|NP_033738.1| actin, alpha cardiac muscle 1 [Mus musculus].
          Length = 377

 Score =  704 bits (1818), Expect = 0.0
 Identities = 352/368 (95%), Positives = 356/368 (96%), Gaps = 1/368 (0%)
 Frame = +1

Query: 190  MCE-EETTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA 366
            MC+ EETTALVCDNGSGL KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
Sbjct: 1    MCDDEETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA 60

Query: 367  QSKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREK 546
            QSKRGILTLKYPIEHGIITNWDDMEKIWHH+FYNELRVAPEEHPTLLTEAPLNPKANREK
Sbjct: 61   QSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREK 120

Query: 547  MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRL 726
            MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRL
Sbjct: 121  MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRL 180

Query: 727  DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEK 906
            DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEK
Sbjct: 181  DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEK 240

Query: 907  SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNV 1086
            SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNV
Sbjct: 241  SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNV 300

Query: 1087 LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFSRCGSA 1266
            LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF +   +
Sbjct: 301  LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 360

Query: 1267 SQSMTRQG 1290
             Q     G
Sbjct: 361  KQEYDEAG 368



 Score = 50.1 bits (118), Expect = 4e-06
 Identities = 21/23 (91%), Positives = 21/23 (91%)
 Frame = +3

Query: 1248 QQMWISKPEYDEAGPSICHRKCF 1316
            QQMWISK EYDEAGPSI HRKCF
Sbjct: 355  QQMWISKQEYDEAGPSIVHRKCF 377


>ref|NP_033736.1| actin, alpha skeletal muscle [Mus musculus].
          Length = 377

 Score =  703 bits (1815), Expect = 0.0
 Identities = 351/368 (95%), Positives = 355/368 (96%), Gaps = 1/368 (0%)
 Frame = +1

Query: 190  MCEE-ETTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA 366
            MC+E ETTALVCDNGSGL KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
Sbjct: 1    MCDEDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA 60

Query: 367  QSKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREK 546
            QSKRGILTLKYPIEHGIITNWDDMEKIWHH+FYNELRVAPEEHPTLLTEAPLNPKANREK
Sbjct: 61   QSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREK 120

Query: 547  MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRL 726
            MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRL
Sbjct: 121  MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRL 180

Query: 727  DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEK 906
            DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEK
Sbjct: 181  DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEK 240

Query: 907  SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNV 1086
            SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNV
Sbjct: 241  SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNV 300

Query: 1087 LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFSRCGSA 1266
            +SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF +    
Sbjct: 301  MSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIT 360

Query: 1267 SQSMTRQG 1290
             Q     G
Sbjct: 361  KQEYDEAG 368



 Score = 48.9 bits (115), Expect = 9e-06
 Identities = 20/23 (86%), Positives = 21/23 (91%)
 Frame = +3

Query: 1248 QQMWISKPEYDEAGPSICHRKCF 1316
            QQMWI+K EYDEAGPSI HRKCF
Sbjct: 355  QQMWITKQEYDEAGPSIVHRKCF 377


>ref|XP_003084637.1| PREDICTED: actin, cytoplasmic 2-like [Mus musculus].
          Length = 389

 Score =  680 bits (1755), Expect = 0.0
 Identities = 338/375 (90%), Positives = 349/375 (93%), Gaps = 1/375 (0%)
 Frame = +1

Query: 196  EEETTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 375
            EEE  ALV DNGSG+CKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2    EEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61

Query: 376  RGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREKMTQ 555
            RGILTLKYPIEHGI+TNWDDMEKIWHH+FYNELRVAPEEHP LLTEAPLNPKANREKMTQ
Sbjct: 62   RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 121

Query: 556  IMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLA 735
            IMFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVTH VPIYEGYALPHAI+RLDLA
Sbjct: 122  IMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 181

Query: 736  GRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYE 915
            GRDLTDYLMKILTERGYSF TTAEREIVRDIKEKLCYVALDFE EMATAASSSSLEKSYE
Sbjct: 182  GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 241

Query: 916  LPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSG 1095
            LPDGQVITIGNERFRCPE LFQPSF+GMES GIHETT+NSIMKCD+DIRKDLYAN VLSG
Sbjct: 242  LPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSG 301

Query: 1096 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFSRCGSASQS 1275
            GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF +   + Q 
Sbjct: 302  GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 361

Query: 1276 MTR-QGLPFVTGSAS 1317
                Q  P  T +AS
Sbjct: 362  YDEXQAPPSSTANAS 376


>ref|NP_033739.1| actin, cytoplasmic 2 [Mus musculus].
          Length = 375

 Score =  680 bits (1754), Expect = 0.0
 Identities = 334/365 (91%), Positives = 344/365 (94%)
 Frame = +1

Query: 196  EEETTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 375
            EEE  ALV DNGSG+CKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2    EEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61

Query: 376  RGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREKMTQ 555
            RGILTLKYPIEHGI+TNWDDMEKIWHH+FYNELRVAPEEHP LLTEAPLNPKANREKMTQ
Sbjct: 62   RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 121

Query: 556  IMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLA 735
            IMFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVTH VPIYEGYALPHAI+RLDLA
Sbjct: 122  IMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 181

Query: 736  GRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYE 915
            GRDLTDYLMKILTERGYSF TTAEREIVRDIKEKLCYVALDFE EMATAASSSSLEKSYE
Sbjct: 182  GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 241

Query: 916  LPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSG 1095
            LPDGQVITIGNERFRCPE LFQPSF+GMES GIHETT+NSIMKCD+DIRKDLYAN VLSG
Sbjct: 242  LPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSG 301

Query: 1096 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFSRCGSASQS 1275
            GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF +   + Q 
Sbjct: 302  GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 361

Query: 1276 MTRQG 1290
                G
Sbjct: 362  YDESG 366



 Score = 48.9 bits (115), Expect = 9e-06
 Identities = 20/23 (86%), Positives = 21/23 (91%)
 Frame = +3

Query: 1248 QQMWISKPEYDEAGPSICHRKCF 1316
            QQMWISK EYDE+GPSI HRKCF
Sbjct: 353  QQMWISKQEYDESGPSIVHRKCF 375


>ref|NP_031419.1| actin, cytoplasmic 1 [Mus musculus].
          Length = 375

 Score =  676 bits (1745), Expect = 0.0
 Identities = 331/365 (90%), Positives = 344/365 (94%)
 Frame = +1

Query: 196  EEETTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 375
            +++  ALV DNGSG+CKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2    DDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61

Query: 376  RGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREKMTQ 555
            RGILTLKYPIEHGI+TNWDDMEKIWHH+FYNELRVAPEEHP LLTEAPLNPKANREKMTQ
Sbjct: 62   RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 121

Query: 556  IMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLA 735
            IMFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVTH VPIYEGYALPHAI+RLDLA
Sbjct: 122  IMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 181

Query: 736  GRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYE 915
            GRDLTDYLMKILTERGYSF TTAEREIVRDIKEKLCYVALDFE EMATAASSSSLEKSYE
Sbjct: 182  GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 241

Query: 916  LPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSG 1095
            LPDGQVITIGNERFRCPE LFQPSF+GMES GIHETT+NSIMKCD+DIRKDLYAN VLSG
Sbjct: 242  LPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSG 301

Query: 1096 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFSRCGSASQS 1275
            GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF +   + Q 
Sbjct: 302  GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 361

Query: 1276 MTRQG 1290
                G
Sbjct: 362  YDESG 366



 Score = 48.9 bits (115), Expect = 9e-06
 Identities = 20/23 (86%), Positives = 21/23 (91%)
 Frame = +3

Query: 1248 QQMWISKPEYDEAGPSICHRKCF 1316
            QQMWISK EYDE+GPSI HRKCF
Sbjct: 353  QQMWISKQEYDESGPSIVHRKCF 375


>ref|NP_780706.1| beta-actin-like protein 2 [Mus musculus].
          Length = 376

 Score =  656 bits (1693), Expect = 0.0
 Identities = 317/371 (85%), Positives = 341/371 (91%)
 Frame = +1

Query: 190  MCEEETTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 369
            M ++E TALV DNGSG+CKAGF GDDAPRAVFPS+VGRPRHQGVMVGMGQKD YVGDEAQ
Sbjct: 1    MVDDELTALVVDNGSGMCKAGFGGDDAPRAVFPSMVGRPRHQGVMVGMGQKDCYVGDEAQ 60

Query: 370  SKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREKM 549
            SKRGILTLKYPIEHG++TNWDDMEKIW+H+FYNELRVAP+EHP LLTEAPLNPK NREKM
Sbjct: 61   SKRGILTLKYPIEHGVVTNWDDMEKIWYHTFYNELRVAPDEHPILLTEAPLNPKINREKM 120

Query: 550  TQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLD 729
            TQIMFE FN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVTH VPIYEGYALPHAI+RLD
Sbjct: 121  TQIMFEAFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLD 180

Query: 730  LAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKS 909
            LAGRDLTDYLMKILTERGY+F TTAEREIVRD+KEKLCYVALDFE EM TAA+SSSLE+S
Sbjct: 181  LAGRDLTDYLMKILTERGYNFTTTAEREIVRDVKEKLCYVALDFEQEMVTAAASSSLERS 240

Query: 910  YELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVL 1089
            YELPDGQVITIGNERFRCPE +FQPSF+G+ES GIHETT+NSIMKCD+DIRKDL+AN VL
Sbjct: 241  YELPDGQVITIGNERFRCPEAIFQPSFLGIESRGIHETTFNSIMKCDVDIRKDLFANTVL 300

Query: 1090 SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFSRCGSAS 1269
            SGG+TMYPGIADRMQKEI  LAPSTMKIKIIAPPERKYSVWIGGSILASLSTF +   + 
Sbjct: 301  SGGSTMYPGIADRMQKEIVTLAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK 360

Query: 1270 QSMTRQGLPFV 1302
            Q     G P V
Sbjct: 361  QEYDEAGPPIV 371


>ref|XP_003086416.1| PREDICTED: actin, cytoplasmic 2-like [Mus musculus].
          Length = 240

 Score =  401 bits (1030), Expect = e-112
 Identities = 201/234 (85%), Positives = 208/234 (88%)
 Frame = +1

Query: 109 HTSPQSLGEGPLLPSVLQPPVHSAALTMCEEETTALVCDNGSGLCKAGFAGDDAPRAVFP 288
           HT P +     LL +   PP  S      EEE  ALV DNGSG+CKAGFAGDDAPRAVFP
Sbjct: 7   HTPPPAYTA--LLAAPPSPPRPSPIAM--EEEIAALVIDNGSGMCKAGFAGDDAPRAVFP 62

Query: 289 SIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHSFYN 468
           SIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHH+FYN
Sbjct: 63  SIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYN 122

Query: 469 ELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIV 648
           ELRVAPEEHP LLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYASGRTTGIV
Sbjct: 123 ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 182

Query: 649 LDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAER 810
           +DSGDGVTH VPIYEGYALPHAI+RLDLAGRDLTDYLMKILTERGYSF TTAER
Sbjct: 183 MDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAER 236


>ref|NP_666219.1| beta-centractin [Mus musculus].
          Length = 376

 Score =  399 bits (1025), Expect = e-111
 Identities = 189/360 (52%), Positives = 260/360 (72%), Gaps = 1/360 (0%)
 Frame = +1

Query: 214  LVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 393
            +V DNGSG+ KAGFAGD  P+  FP+ VGRP+H  VM G  + D ++G +A+  RG+LT+
Sbjct: 12   VVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHMRVMAGALEGDLFIGPKAEEHRGLLTI 71

Query: 394  KYPIEHGIITNWDDMEKIWHHSFY-NELRVAPEEHPTLLTEAPLNPKANREKMTQIMFET 570
            +YP+EHG++ +W+DME+IW + +  ++L+   EEHP LLTEAPLNP  NREK  ++ FET
Sbjct: 72   RYPMEHGVVRDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPSKNREKAAEVFFET 131

Query: 571  FNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLT 750
            FNVPA+++++QAVLSLYA+GRTTG+VLDSGDGVTH VPIYEG+A+PH+IMR+D+AGRD++
Sbjct: 132  FNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRVDIAGRDVS 191

Query: 751  DYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQ 930
             YL  +L + G  F T+AE E+VR IKE+ CY++++ + + A        +  Y LPDG 
Sbjct: 192  RYLRLLLRKEGADFHTSAEFEVVRTIKERACYLSINPQKDEALETE----KVQYTLPDGS 247

Query: 931  VITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSGGTTMY 1110
             + +G  RFR PE LFQP  +G ES G+HE    +I K D+D+R+ L++N VLSGG+T++
Sbjct: 248  TLDVGPARFRAPELLFQPDLVGDESEGLHEVLAFAIHKSDMDLRRTLFSNIVLSGGSTLF 307

Query: 1111 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFSRCGSASQSMTRQG 1290
             G  DR+  E+  LAP  +KIKI AP ER YS WIGGSILASL TF +   + +     G
Sbjct: 308  KGFGDRLLSEVKKLAPKDVKIKISAPQERLYSTWIGGSILASLDTFKKMWVSKKEYEEDG 367


  Database: RefSeq49_MP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 15,617,559
  Number of sequences in database:  30,036
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 44,378,416
Number of extensions: 1266983
Number of successful extensions: 4849
Number of sequences better than 1.0e-05: 30
Number of HSP's gapped: 4753
Number of HSP's successfully gapped: 46
Length of query: 439
Length of database: 15,617,559
Length adjustment: 104
Effective length of query: 335
Effective length of database: 12,493,815
Effective search space: 4185428025
Effective search space used: 4185428025
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-001620
         (1318 letters)

Database: RefSeq49_SP.fasta 
           24,897 sequences; 11,343,932 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001158122.1| actin, aortic smooth muscle [Sus scrofa].         709   0.0  
Alignment   gi|NP_001163988.1| actin, alpha cardiac muscle 1 [Sus scrofa].       704   0.0  
Alignment   gi|NP_001161267.1| actin, alpha skeletal muscle [Sus scrofa].        703   0.0  
Alignment   gi|XP_003121682.1| PREDICTED: actin, alpha cardiac muscle 1-lik...   702   0.0  
Alignment   gi|XP_003357976.1| PREDICTED: actin, cytoplasmic 2 [Sus scrofa].     680   0.0  
Alignment   gi|XP_003124328.1| PREDICTED: actin, cytoplasmic 1 [Sus scrofa].     676   0.0  
Alignment   gi|XP_003353462.1| PREDICTED: actin, alpha cardiac muscle 1-lik...   593   e-170
Alignment   gi|XP_003354819.1| PREDICTED: actin, gamma-enteric smooth muscl...   493   e-140
Alignment   gi|XP_003125076.2| PREDICTED: actin, gamma-enteric smooth muscl...   404   e-122
Alignment   gi|XP_001928912.1| PREDICTED: alpha-centractin [Sus scrofa].         394   e-110

>ref|NP_001158122.1| actin, aortic smooth muscle [Sus scrofa].
          Length = 377

 Score =  709 bits (1830), Expect = 0.0
 Identities = 354/368 (96%), Positives = 357/368 (97%), Gaps = 1/368 (0%)
 Frame = +1

Query: 190  MCEEE-TTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA 366
            MCEEE +TALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
Sbjct: 1    MCEEEDSTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA 60

Query: 367  QSKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREK 546
            QSKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREK
Sbjct: 61   QSKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREK 120

Query: 547  MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRL 726
            MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRL
Sbjct: 121  MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRL 180

Query: 727  DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEK 906
            DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEK
Sbjct: 181  DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEK 240

Query: 907  SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNV 1086
            SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNV
Sbjct: 241  SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNV 300

Query: 1087 LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFSRCGSA 1266
            LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF +   +
Sbjct: 301  LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 360

Query: 1267 SQSMTRQG 1290
             Q     G
Sbjct: 361  KQEYDEAG 368



 Score = 50.1 bits (118), Expect = 3e-06
 Identities = 21/23 (91%), Positives = 21/23 (91%)
 Frame = +3

Query: 1248 QQMWISKPEYDEAGPSICHRKCF 1316
            QQMWISK EYDEAGPSI HRKCF
Sbjct: 355  QQMWISKQEYDEAGPSIVHRKCF 377


>ref|NP_001163988.1| actin, alpha cardiac muscle 1 [Sus scrofa].
          Length = 377

 Score =  704 bits (1818), Expect = 0.0
 Identities = 352/368 (95%), Positives = 356/368 (96%), Gaps = 1/368 (0%)
 Frame = +1

Query: 190  MCE-EETTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA 366
            MC+ EETTALVCDNGSGL KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
Sbjct: 1    MCDDEETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA 60

Query: 367  QSKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREK 546
            QSKRGILTLKYPIEHGIITNWDDMEKIWHH+FYNELRVAPEEHPTLLTEAPLNPKANREK
Sbjct: 61   QSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREK 120

Query: 547  MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRL 726
            MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRL
Sbjct: 121  MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRL 180

Query: 727  DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEK 906
            DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEK
Sbjct: 181  DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEK 240

Query: 907  SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNV 1086
            SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNV
Sbjct: 241  SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNV 300

Query: 1087 LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFSRCGSA 1266
            LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF +   +
Sbjct: 301  LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 360

Query: 1267 SQSMTRQG 1290
             Q     G
Sbjct: 361  KQEYDEAG 368



 Score = 50.1 bits (118), Expect = 3e-06
 Identities = 21/23 (91%), Positives = 21/23 (91%)
 Frame = +3

Query: 1248 QQMWISKPEYDEAGPSICHRKCF 1316
            QQMWISK EYDEAGPSI HRKCF
Sbjct: 355  QQMWISKQEYDEAGPSIVHRKCF 377


>ref|NP_001161267.1| actin, alpha skeletal muscle [Sus scrofa].
          Length = 377

 Score =  703 bits (1815), Expect = 0.0
 Identities = 351/368 (95%), Positives = 355/368 (96%), Gaps = 1/368 (0%)
 Frame = +1

Query: 190  MCEE-ETTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA 366
            MC+E ETTALVCDNGSGL KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
Sbjct: 1    MCDEDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA 60

Query: 367  QSKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREK 546
            QSKRGILTLKYPIEHGIITNWDDMEKIWHH+FYNELRVAPEEHPTLLTEAPLNPKANREK
Sbjct: 61   QSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREK 120

Query: 547  MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRL 726
            MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRL
Sbjct: 121  MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRL 180

Query: 727  DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEK 906
            DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEK
Sbjct: 181  DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEK 240

Query: 907  SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNV 1086
            SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNV
Sbjct: 241  SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNV 300

Query: 1087 LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFSRCGSA 1266
            +SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF +    
Sbjct: 301  MSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIT 360

Query: 1267 SQSMTRQG 1290
             Q     G
Sbjct: 361  KQEYDEAG 368



 Score = 48.9 bits (115), Expect = 6e-06
 Identities = 20/23 (86%), Positives = 21/23 (91%)
 Frame = +3

Query: 1248 QQMWISKPEYDEAGPSICHRKCF 1316
            QQMWI+K EYDEAGPSI HRKCF
Sbjct: 355  QQMWITKQEYDEAGPSIVHRKCF 377


>ref|XP_003121682.1| PREDICTED: actin, alpha cardiac muscle 1-like isoform 1 [Sus scrofa].
          Length = 377

 Score =  702 bits (1813), Expect = 0.0
 Identities = 351/368 (95%), Positives = 356/368 (96%), Gaps = 1/368 (0%)
 Frame = +1

Query: 190  MCE-EETTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA 366
            MC+ EETTALVCDNGSGL KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
Sbjct: 1    MCDDEETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA 60

Query: 367  QSKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREK 546
            QSKRGILTLKYPIEHGIITNWDDMEKIWHH+FYNELRVAPEEHPTLLTEAPLNPKANREK
Sbjct: 61   QSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREK 120

Query: 547  MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRL 726
            MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRL
Sbjct: 121  MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRL 180

Query: 727  DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEK 906
            DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLC+VALDFENEMATAASSSSLEK
Sbjct: 181  DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCHVALDFENEMATAASSSSLEK 240

Query: 907  SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNV 1086
            SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNV
Sbjct: 241  SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNV 300

Query: 1087 LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFSRCGSA 1266
            LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF +   +
Sbjct: 301  LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 360

Query: 1267 SQSMTRQG 1290
             Q     G
Sbjct: 361  KQEYDEAG 368



 Score = 50.1 bits (118), Expect = 3e-06
 Identities = 21/23 (91%), Positives = 21/23 (91%)
 Frame = +3

Query: 1248 QQMWISKPEYDEAGPSICHRKCF 1316
            QQMWISK EYDEAGPSI HRKCF
Sbjct: 355  QQMWISKQEYDEAGPSIVHRKCF 377


>ref|XP_003357976.1| PREDICTED: actin, cytoplasmic 2 [Sus scrofa].
          Length = 375

 Score =  680 bits (1754), Expect = 0.0
 Identities = 334/365 (91%), Positives = 344/365 (94%)
 Frame = +1

Query: 196  EEETTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 375
            EEE  ALV DNGSG+CKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2    EEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61

Query: 376  RGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREKMTQ 555
            RGILTLKYPIEHGI+TNWDDMEKIWHH+FYNELRVAPEEHP LLTEAPLNPKANREKMTQ
Sbjct: 62   RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 121

Query: 556  IMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLA 735
            IMFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVTH VPIYEGYALPHAI+RLDLA
Sbjct: 122  IMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 181

Query: 736  GRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYE 915
            GRDLTDYLMKILTERGYSF TTAEREIVRDIKEKLCYVALDFE EMATAASSSSLEKSYE
Sbjct: 182  GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 241

Query: 916  LPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSG 1095
            LPDGQVITIGNERFRCPE LFQPSF+GMES GIHETT+NSIMKCD+DIRKDLYAN VLSG
Sbjct: 242  LPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSG 301

Query: 1096 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFSRCGSASQS 1275
            GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF +   + Q 
Sbjct: 302  GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 361

Query: 1276 MTRQG 1290
                G
Sbjct: 362  YDESG 366



 Score = 48.9 bits (115), Expect = 6e-06
 Identities = 20/23 (86%), Positives = 21/23 (91%)
 Frame = +3

Query: 1248 QQMWISKPEYDEAGPSICHRKCF 1316
            QQMWISK EYDE+GPSI HRKCF
Sbjct: 353  QQMWISKQEYDESGPSIVHRKCF 375


>ref|XP_003124328.1| PREDICTED: actin, cytoplasmic 1 [Sus scrofa].
          Length = 375

 Score =  676 bits (1745), Expect = 0.0
 Identities = 331/365 (90%), Positives = 344/365 (94%)
 Frame = +1

Query: 196  EEETTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 375
            +++  ALV DNGSG+CKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2    DDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61

Query: 376  RGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREKMTQ 555
            RGILTLKYPIEHGI+TNWDDMEKIWHH+FYNELRVAPEEHP LLTEAPLNPKANREKMTQ
Sbjct: 62   RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 121

Query: 556  IMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLA 735
            IMFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVTH VPIYEGYALPHAI+RLDLA
Sbjct: 122  IMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 181

Query: 736  GRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYE 915
            GRDLTDYLMKILTERGYSF TTAEREIVRDIKEKLCYVALDFE EMATAASSSSLEKSYE
Sbjct: 182  GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 241

Query: 916  LPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSG 1095
            LPDGQVITIGNERFRCPE LFQPSF+GMES GIHETT+NSIMKCD+DIRKDLYAN VLSG
Sbjct: 242  LPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSG 301

Query: 1096 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFSRCGSASQS 1275
            GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF +   + Q 
Sbjct: 302  GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 361

Query: 1276 MTRQG 1290
                G
Sbjct: 362  YDESG 366



 Score = 48.9 bits (115), Expect = 6e-06
 Identities = 20/23 (86%), Positives = 21/23 (91%)
 Frame = +3

Query: 1248 QQMWISKPEYDEAGPSICHRKCF 1316
            QQMWISK EYDE+GPSI HRKCF
Sbjct: 353  QQMWISKQEYDESGPSIVHRKCF 375


>ref|XP_003353462.1| PREDICTED: actin, alpha cardiac muscle 1-like isoform 2 [Sus scrofa].
          Length = 334

 Score =  593 bits (1530), Expect = e-170
 Identities = 308/368 (83%), Positives = 313/368 (85%), Gaps = 1/368 (0%)
 Frame = +1

Query: 190  MCE-EETTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA 366
            MC+ EETTALVCDNGSGL KAGFAGDDAPRAVFPSIVGRPRHQ                 
Sbjct: 1    MCDDEETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQ----------------- 43

Query: 367  QSKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREK 546
                                      IWHH+FYNELRVAPEEHPTLLTEAPLNPKANREK
Sbjct: 44   --------------------------IWHHTFYNELRVAPEEHPTLLTEAPLNPKANREK 77

Query: 547  MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRL 726
            MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRL
Sbjct: 78   MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRL 137

Query: 727  DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEK 906
            DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLC+VALDFENEMATAASSSSLEK
Sbjct: 138  DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCHVALDFENEMATAASSSSLEK 197

Query: 907  SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNV 1086
            SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNV
Sbjct: 198  SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNV 257

Query: 1087 LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFSRCGSA 1266
            LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF +   +
Sbjct: 258  LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 317

Query: 1267 SQSMTRQG 1290
             Q     G
Sbjct: 318  KQEYDEAG 325



 Score = 50.1 bits (118), Expect = 3e-06
 Identities = 21/23 (91%), Positives = 21/23 (91%)
 Frame = +3

Query: 1248 QQMWISKPEYDEAGPSICHRKCF 1316
            QQMWISK EYDEAGPSI HRKCF
Sbjct: 312  QQMWISKQEYDEAGPSIVHRKCF 334


>ref|XP_003354819.1| PREDICTED: actin, gamma-enteric smooth muscle-like [Sus scrofa].
          Length = 313

 Score =  493 bits (1270), Expect = e-140
 Identities = 245/247 (99%), Positives = 247/247 (100%)
 Frame = +1

Query: 439  EKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSL 618
            E+IWHHSFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSL
Sbjct: 36   EQIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSL 95

Query: 619  YASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVT 798
            YASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVT
Sbjct: 96   YASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVT 155

Query: 799  TAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQVITIGNERFRCPETLF 978
            TAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQVITIGNERFRCPETLF
Sbjct: 156  TAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQVITIGNERFRCPETLF 215

Query: 979  QPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSGGTTMYPGIADRMQKEITALAP 1158
            QPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSGGTTMYPGIADRMQKEITALAP
Sbjct: 216  QPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSGGTTMYPGIADRMQKEITALAP 275

Query: 1159 STMKIKI 1179
            STMKIK+
Sbjct: 276  STMKIKV 282


>ref|XP_003125076.2| PREDICTED: actin, gamma-enteric smooth muscle-like [Sus scrofa].
          Length = 268

 Score =  404 bits (1037), Expect(2) = e-122
 Identities = 202/204 (99%), Positives = 203/204 (99%)
 Frame = +1

Query: 643  IVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVR 822
            IVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVR
Sbjct: 44   IVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVR 103

Query: 823  DIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQVITIGNERFRCPETLFQPSFIGME 1002
            DIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQVITIGNERFRCPETLFQPSFIGME
Sbjct: 104  DIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQVITIGNERFRCPETLFQPSFIGME 163

Query: 1003 SAGIHETTYNSIMKCDIDIRKDLYANNVLSGGTTMYPGIADRMQKEITALAPSTMKIKII 1182
            SAGIHETTYNSIMKCDIDIRKDLYANNVLSGGTTMYPGIADRMQKEITALAPSTMKIKII
Sbjct: 164  SAGIHETTYNSIMKCDIDIRKDLYANNVLSGGTTMYPGIADRMQKEITALAPSTMKIKII 223

Query: 1183 APPERKYSVWIGGSILASLSTFSR 1254
            APPERKYSVWIGGSILASLSTF +
Sbjct: 224  APPERKYSVWIGGSILASLSTFQQ 247



 Score = 53.1 bits (126), Expect(2) = e-122
 Identities = 22/23 (95%), Positives = 22/23 (95%)
 Frame = +3

Query: 1248 QQMWISKPEYDEAGPSICHRKCF 1316
            QQMWISKPEYDEAGPSI HRKCF
Sbjct: 246  QQMWISKPEYDEAGPSIVHRKCF 268


>ref|XP_001928912.1| PREDICTED: alpha-centractin [Sus scrofa].
          Length = 376

 Score =  394 bits (1013), Expect = e-110
 Identities = 187/360 (51%), Positives = 260/360 (72%), Gaps = 1/360 (0%)
 Frame = +1

Query: 214  LVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 393
            +V DNGSG+ KAGFAGD  P+  FP+ VGRP+H  VM G  + D ++G +A+  RG+L++
Sbjct: 12   VVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHVRVMAGALEGDIFIGPKAEEHRGLLSI 71

Query: 394  KYPIEHGIITNWDDMEKIWHHSFY-NELRVAPEEHPTLLTEAPLNPKANREKMTQIMFET 570
            +YP+EHGI+ +W+DME+IW + +  ++L+   EEHP LLTEAPLNP+ NRE+  ++ FET
Sbjct: 72   RYPMEHGIVKDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPRKNRERAAEVFFET 131

Query: 571  FNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLT 750
            FNVPA+++++QAVLSLYA+GRTTG+VLDSGDGVTH VPIYEG+A+PH+IMR+D+AGRD++
Sbjct: 132  FNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRIDIAGRDVS 191

Query: 751  DYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQ 930
             +L   L + GY F +++E EIV+ IKE+ CY++++ + +       +     Y LPDG 
Sbjct: 192  RFLRLYLRKEGYDFHSSSEFEIVKAIKERACYLSINPQKDETLETEKA----QYYLPDGS 247

Query: 931  VITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSGGTTMY 1110
             I IG  RFR PE LF+P  IG ES GIHE    +I K D+D+R+ L++N VLSGG+T++
Sbjct: 248  TIEIGPSRFRAPELLFRPDLIGEESEGIHEVLVFAIQKSDMDLRRTLFSNIVLSGGSTLF 307

Query: 1111 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFSRCGSASQSMTRQG 1290
             G  DR+  E+  LAP  +KI+I AP ER YS WIGGSILASL TF +   + +     G
Sbjct: 308  KGFGDRLLSEVKKLAPKDVKIRISAPQERLYSTWIGGSILASLDTFKKMWVSKKEYEEDG 367


  Database: RefSeq49_SP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 11,343,932
  Number of sequences in database:  24,897
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 33,023,998
Number of extensions: 962498
Number of successful extensions: 3915
Number of sequences better than 1.0e-05: 29
Number of HSP's gapped: 3854
Number of HSP's successfully gapped: 45
Length of query: 439
Length of database: 11,343,932
Length adjustment: 102
Effective length of query: 337
Effective length of database: 8,804,438
Effective search space: 2967095606
Effective search space used: 2967095606
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

BLASTN 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-001620
         (1318 letters)

Database: Sscrofa_10.2.fasta 
           4582 sequences; 2,808,509,378 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Sscrofa_Chr03                                                         379   e-102
Sscrofa_Chr12                                                         327   9e-87
Sscrofa_Chr01                                                         325   4e-86
Sscrofa_Chr14                                                         317   9e-84
Sscrofa_Chr16                                                         283   1e-73
Sscrofa_Chr13                                                          88   1e-14

>Sscrofa_Chr03 
||          Length = 144787322

 Score =  379 bits (191), Expect = e-102
 Identities = 194/195 (99%)
 Strand = Plus / Minus

                                                                            
Query: 801      agctgaacgagaaatcgtgcgagacatcaaggagaagctgtgctatgtggccctggactt 860
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72256575 agctgaacgagaaatcgtgcgagacatcaaggagaagctgtgctatgtggccctggactt 72256516

                                                                            
Query: 861      tgagaacgagatggccacggcagcctcctcttcctccctggagaagagctatgagctgcc 920
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72256515 tgagaacgagatggccacggcagcctcctcttcctccctggagaagagctatgagctgcc 72256456

                                                                            
Query: 921      ggacggacaggtcatcaccatcggcaatgagcgcttccgctgcccggagaccctcttcca 980
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72256455 ggacggacaggtcatcaccatcggcaatgagcgcttccgctgcccggagaccctcttcca 72256396

                               
Query: 981      gccttccttcatcgg 995
                ||| |||||||||||
Sbjct: 72256395 gccctccttcatcgg 72256381



 Score =  363 bits (183), Expect = 2e-97
 Identities = 183/183 (100%)
 Strand = Plus / Minus

                                                                            
Query: 994      ggcatggagtcagctggaattcatgaaacaacctacaattccatcatgaagtgtgacatt 1053
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72255344 ggcatggagtcagctggaattcatgaaacaacctacaattccatcatgaagtgtgacatt 72255285

                                                                            
Query: 1054     gacatccgcaaagacttatacgccaacaacgtcctctctgggggtaccactatgtatcct 1113
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72255284 gacatccgcaaagacttatacgccaacaacgtcctctctgggggtaccactatgtatcct 72255225

                                                                            
Query: 1114     ggcattgccgacaggatgcagaaggagatcacagccctggcccccagtaccatgaagatc 1173
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72255224 ggcattgccgacaggatgcagaaggagatcacagccctggcccccagtaccatgaagatc 72255165

                   
Query: 1174     aag 1176
                |||
Sbjct: 72255164 aag 72255162



 Score =  331 bits (167), Expect = 6e-88
 Identities = 371/439 (84%)
 Strand = Plus / Minus

                                                                           
Query: 552     ccagatcatgttcgaaaccttcaatgtccctgccatgtacgttgccattcaagctgtgct 611
               ||||||||||||||| ||||||||   ||| ||||||||||| ||||| || || |||||
Sbjct: 4730916 ccagatcatgttcgagaccttcaacaccccagccatgtacgtggccatccaggccgtgct 4730857

                                                                           
Query: 612     ctccctctatgcttccggccgcacaacaggcatcgtcctggattccggggatggcgtcac 671
                ||||| || || || |||||||| || ||||||||  |||| ||||| || || |||||
Sbjct: 4730856 gtccctgtacgcctctggccgcaccactggcatcgtgatggactccggagacggggtcac 4730797

                                                                           
Query: 672     ccacaatgtccctatctatgagggatacgcactgccccacgccatcatgcgcctggatct 731
               |||||  || || ||||| ||||| ||||| ||||||||||||||| |||| ||||| ||
Sbjct: 4730796 ccacacggtgcccatctacgaggggtacgccctgccccacgccatcctgcgtctggacct 4730737

                                                                           
Query: 732     ggctggccgcgacctcacggactacctcatgaagatcctcacagagagaggctactcctt 791
               ||||||||| ||||| || |||||||||||||||||||| || ||| | ||||||  |||
Sbjct: 4730736 ggctggccgggacctgaccgactacctcatgaagatcctgacggagcggggctacagctt 4730677

                                                                           
Query: 792     tgtgaccacagctgaacgagaaatcgtgcgagacatcaaggagaagctgtgctatgtggc 851
                   ||||| || || || || |||||||| ||||||||||||||||||||||| || ||
Sbjct: 4730676 caccaccacggccgagcgggagatcgtgcgggacatcaaggagaagctgtgctacgtcgc 4730617

                                                                           
Query: 852     cctggactttgagaacgagatggccacggcagcctcctcttcctccctggagaagagcta 911
               ||||||||| ||| | ||||||||||| || || ||||| ||||||||||||||||||||
Sbjct: 4730616 cctggacttcgagcaggagatggccactgccgcgtcctcctcctccctggagaagagcta 4730557

                                                                           
Query: 912     tgagctgccggacggacaggtcatcaccatcggcaatgagcgcttccgctgcccggagac 971
                |||||||| ||||| |||||||||||||||||||| ||||||||||||||||| ||| |
Sbjct: 4730556 cgagctgcccgacggccaggtcatcaccatcggcaacgagcgcttccgctgccccgaggc 4730497

                                  
Query: 972     cctcttccagccttccttc 990
                ||||||||||| ||||||
Sbjct: 4730496 gctcttccagccctccttc 4730478



 Score =  325 bits (164), Expect = 4e-86
 Identities = 164/164 (100%)
 Strand = Plus / Minus

                                                                            
Query: 639      aggcatcgtcctggattccggggatggcgtcacccacaatgtccctatctatgagggata 698
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72257788 aggcatcgtcctggattccggggatggcgtcacccacaatgtccctatctatgagggata 72257729

                                                                            
Query: 699      cgcactgccccacgccatcatgcgcctggatctggctggccgcgacctcacggactacct 758
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72257728 cgcactgccccacgccatcatgcgcctggatctggctggccgcgacctcacggactacct 72257669

                                                            
Query: 759      catgaagatcctcacagagagaggctactcctttgtgaccacag 802
                ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72257668 catgaagatcctcacagagagaggctactcctttgtgaccacag 72257625



 Score =  248 bits (125), Expect = 7e-63
 Identities = 141/145 (97%), Gaps = 1/145 (0%)
 Strand = Plus / Minus

                                                                            
Query: 1175     agattattgctcccccagagcggaagtactcggtctggatcggaggctctatcctggcct 1234
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72252095 agattattgctcccccagagcggaagtactcggtctggatcggaggctctatcctggcct 72252036

                                                                            
Query: 1235     ctctctccacctt-cagcagatgtggatcagcaagccagagtatgacgaggcagggcctt 1293
                ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72252035 ctctctccaccttccagcagatgtggatcagcaagccagagtatgacgaggcagggcctt 72251976

                                         
Query: 1294     ccatttgtcacaggaagtgcttcta 1318
                |||||   |||||||||||||||||
Sbjct: 72251975 ccattgtccacaggaagtgcttcta 72251951



 Score =  228 bits (115), Expect = 6e-57
 Identities = 211/243 (86%)
 Strand = Plus / Minus

                                                                           
Query: 313     cagggtgtaatggtgggaatgggccagaaagacagctacgtgggggatgaggctcagagc 372
               ||||| || |||||||| ||||||||||| |||  |||||||||||| ||||| ||||||
Sbjct: 4731602 cagggcgtgatggtgggcatgggccagaaggactcctacgtgggggacgaggcccagagc 4731543

                                                                           
Query: 373     aagcgagggatcctaactctcaaataccccattgaacacggcatcatcaccaactgggat 432
               ||| |||| ||||| || ||||| |||||||| || ||||||||| ||||||||||||| 
Sbjct: 4731542 aagagaggcatcctgaccctcaagtaccccatcgagcacggcatcgtcaccaactgggac 4731483

                                                                           
Query: 433     gacatggagaagatctggcaccactccttctacaacgagctgcgggtagcacctgaggag 492
               |||||||||||||||||||||||| ||||||||||||||||||| || || || ||||||
Sbjct: 4731482 gacatggagaagatctggcaccacaccttctacaacgagctgcgtgtggcccccgaggag 4731423

                                                                           
Query: 493     caccccaccctgctcacggaggcccccctaaatcccaaggccaacagggagaagatgacc 552
               ||||||   ||||| || ||||||||||| || ||||| |||||| | ||||||||||||
Sbjct: 4731422 caccccgtgctgctgaccgaggcccccctgaaccccaaagccaaccgtgagaagatgacc 4731363

                  
Query: 553     cag 555
               |||
Sbjct: 4731362 cag 4731360



 Score =  224 bits (113), Expect = 1e-55
 Identities = 113/113 (100%)
 Strand = Plus / Minus

                                                                            
Query: 443      agatctggcaccactccttctacaacgagctgcgggtagcacctgaggagcaccccaccc 502
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72310107 agatctggcaccactccttctacaacgagctgcgggtagcacctgaggagcaccccaccc 72310048

                                                                     
Query: 503      tgctcacggaggcccccctaaatcccaaggccaacagggagaagatgacccag 555
                |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72310047 tgctcacggaggcccccctaaatcccaaggccaacagggagaagatgacccag 72309995



 Score =  174 bits (88), Expect = 8e-41
 Identities = 88/88 (100%)
 Strand = Plus / Minus

                                                                            
Query: 554      agatcatgttcgaaaccttcaatgtccctgccatgtacgttgccattcaagctgtgctct 613
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72309801 agatcatgttcgaaaccttcaatgtccctgccatgtacgttgccattcaagctgtgctct 72309742

                                            
Query: 614      ccctctatgcttccggccgcacaacagg 641
                ||||||||||||||||||||||||||||
Sbjct: 72309741 ccctctatgcttccggccgcacaacagg 72309714



 Score =  139 bits (70), Expect = 4e-30
 Identities = 70/70 (100%)
 Strand = Plus / Minus

                                                                            
Query: 87       gctctgatatttctgccaaagacacaccagccctcagtcactgggagaaggacctctctt 146
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72322811 gctctgatatttctgccaaagacacaccagccctcagtcactgggagaaggacctctctt 72322752

                          
Query: 147      accctcggtg 156
                ||||||||||
Sbjct: 72322751 accctcggtg 72322742



 Score =  125 bits (63), Expect = 7e-26
 Identities = 135/159 (84%)
 Strand = Plus / Minus

                                                                           
Query: 1018    gaaacaacctacaattccatcatgaagtgtgacattgacatccgcaaagacttatacgcc 1077
               ||||| |||| ||| |||||||||||||| ||| | ||||||||||| ||| | ||||||
Sbjct: 4730352 gaaactaccttcaactccatcatgaagtgcgacgtcgacatccgcaaggacctctacgcc 4730293

                                                                           
Query: 1078    aacaacgtcctctctgggggtaccactatgtatcctggcattgccgacaggatgcagaag 1137
               ||||  || || || || || ||||| ||||| || ||||| ||||||||||||||||||
Sbjct: 4730292 aacacggtgctgtcgggtggcaccaccatgtacccaggcatcgccgacaggatgcagaag 4730233

                                                      
Query: 1138    gagatcacagccctggcccccagtaccatgaagatcaag 1176
               |||||||| |||||||| ||||| || ||||||||||||
Sbjct: 4730232 gagatcacggccctggcgcccagcacgatgaagatcaag 4730194



 Score = 95.6 bits (48), Expect = 6e-17
 Identities = 85/96 (88%), Gaps = 1/96 (1%)
 Strand = Plus / Minus

                                                                           
Query: 1189    ccagagcggaagtactcggtctggatcggaggctctatcctggcctctctctccacctt- 1247
               |||||||| |||||||| || |||||||| ||||| ||||||||||| || |||||||| 
Sbjct: 4730051 ccagagcgcaagtactccgtgtggatcggcggctccatcctggcctcgctgtccaccttc 4729992

                                                   
Query: 1248    cagcagatgtggatcagcaagccagagtatgacgag 1283
               ||||||||||||||||||||||  ||||| ||||||
Sbjct: 4729991 cagcagatgtggatcagcaagcaggagtacgacgag 4729956



 Score = 75.8 bits (38), Expect = 5e-11
 Identities = 80/94 (85%)
 Strand = Plus / Minus

                                                                           
Query: 223     gacaatggctctggcctgtgcaaggctggcttcgcaggagatgacgctccccgggccgtc 282
               ||||| ||||| ||| |||||||||| ||||| || || || || |||||||||||||||
Sbjct: 4731824 gacaacggctccggcatgtgcaaggccggctttgcgggcgacgatgctccccgggccgtc 4731765

                                                 
Query: 283     tttccttccatcgtgggtcgccctcgccaccagg 316
               || || ||||||||||| ||||| || |||||||
Sbjct: 4731764 ttcccctccatcgtggggcgcccccgacaccagg 4731731


>Sscrofa_Chr12 
||          Length = 63588571

 Score =  327 bits (165), Expect = 9e-87
 Identities = 288/329 (87%)
 Strand = Plus / Plus

                                                                           
Query: 223     gacaatggctctggcctgtgcaaggctggcttcgcaggagatgacgctccccgggccgtc 282
               ||||||||||| ||| ||||||| |||||||| || || |||||||| ||||||||||| 
Sbjct: 1163723 gacaatggctccggcatgtgcaaagctggctttgctggggatgacgccccccgggccgtg 1163782

                                                                           
Query: 283     tttccttccatcgtgggtcgccctcgccaccagggtgtaatggtgggaatgggccagaaa 342
               || || |||||||| || || || || ||||||||||| |||||||| ||||||||||| 
Sbjct: 1163783 ttcccgtccatcgtcgggcgtccccgacaccagggtgtcatggtgggcatgggccagaag 1163842

                                                                           
Query: 343     gacagctacgtgggggatgaggctcagagcaagcgagggatcctaactctcaaatacccc 402
               |||||||||||||| || ||||||||||||||||| || ||||| || ||||| ||||||
Sbjct: 1163843 gacagctacgtgggcgacgaggctcagagcaagcggggcatcctgaccctcaagtacccc 1163902

                                                                           
Query: 403     attgaacacggcatcatcaccaactgggatgacatggagaagatctggcaccactccttc 462
               || |||||||||||| ||||||||||||| |||||||||||||||||||| ||| |||||
Sbjct: 1163903 atcgaacacggcatcgtcaccaactgggacgacatggagaagatctggcatcacaccttc 1163962

                                                                           
Query: 463     tacaacgagctgcgggtagcacctgaggagcaccccaccctgctcacggaggccccccta 522
               |||||||||||||| || || || ||||||||||||   |||||||||||||||||||| 
Sbjct: 1163963 tacaacgagctgcgcgtggcccccgaggagcaccccgtgctgctcacggaggcccccctg 1164022

                                            
Query: 523     aatcccaaggccaacagggagaagatgac 551
               || |||||||||||| | |||||||||||
Sbjct: 1164023 aaccccaaggccaaccgtgagaagatgac 1164051



 Score =  317 bits (160), Expect = 9e-84
 Identities = 370/440 (84%)
 Strand = Plus / Plus

                                                                           
Query: 551     cccagatcatgttcgaaaccttcaatgtccctgccatgtacgttgccattcaagctgtgc 610
               |||||||||||||||| ||||||||    || ||||||||||| ||||| || || ||||
Sbjct: 1164341 cccagatcatgttcgagaccttcaacacgccggccatgtacgtggccatccaggccgtgc 1164400

                                                                           
Query: 611     tctccctctatgcttccggccgcacaacaggcatcgtcctggattccggggatggcgtca 670
               | ||||| || || || |||||||| || ||||| ||| |||| || |||||||| ||||
Sbjct: 1164401 tgtccctgtacgcctctggccgcaccactggcattgtcatggactctggggatggggtca 1164460

                                                                           
Query: 671     cccacaatgtccctatctatgagggatacgcactgccccacgccatcatgcgcctggatc 730
               ||||||  || || ||||| ||||| ||||| ||||||||||||||| |||| ||||| |
Sbjct: 1164461 cccacacggtgcccatctacgaggggtacgccctgccccacgccatcctgcgtctggacc 1164520

                                                                           
Query: 731     tggctggccgcgacctcacggactacctcatgaagatcctcacagagagaggctactcct 790
               |||||||||| ||||| || ||||||||||||||||||||||| ||| | ||||||  ||
Sbjct: 1164521 tggctggccgggacctgaccgactacctcatgaagatcctcacggagcggggctacagct 1164580

                                                                           
Query: 791     ttgtgaccacagctgaacgagaaatcgtgcgagacatcaaggagaagctgtgctatgtgg 850
               |    ||||| || || || || |||||||| ||||||||||||||||| ||||| || |
Sbjct: 1164581 tcaccaccacggccgagcgggagatcgtgcgggacatcaaggagaagctctgctacgtcg 1164640

                                                                           
Query: 851     ccctggactttgagaacgagatggccacggcagcctcctcttcctccctggagaagagct 910
               |||||||||| ||| | ||||||||||| || || ||||| |||||||||||||||||||
Sbjct: 1164641 ccctggacttcgagcaggagatggccaccgccgcgtcctcctcctccctggagaagagct 1164700

                                                                           
Query: 911     atgagctgccggacggacaggtcatcaccatcggcaatgagcgcttccgctgcccggaga 970
               | |||||||| ||||| |||||||||||||||||||| ||||||||||| || || ||| 
Sbjct: 1164701 acgagctgcccgacggccaggtcatcaccatcggcaacgagcgcttccggtgtccagagg 1164760

                                   
Query: 971     ccctcttccagccttccttc 990
               | ||||||||||| ||||||
Sbjct: 1164761 cgctcttccagccctccttc 1164780



 Score =  113 bits (57), Expect = 3e-22
 Identities = 120/141 (85%)
 Strand = Plus / Plus

                                                                           
Query: 1036    atcatgaagtgtgacattgacatccgcaaagacttatacgccaacaacgtcctctctggg 1095
               ||||||||||| ||| | |||||| | || ||| | ||||||||||  || || ||||| 
Sbjct: 1164921 atcatgaagtgcgacgtggacatcaggaaggacctctacgccaacacggtgctgtctggc 1164980

                                                                           
Query: 1096    ggtaccactatgtatcctggcattgccgacaggatgcagaaggagatcacagccctggcc 1155
               || ||||| ||||| || ||||| |||||||||||||||||||||||||| |||||||| 
Sbjct: 1164981 gggaccaccatgtaccccggcatcgccgacaggatgcagaaggagatcacggccctggcg 1165040

                                    
Query: 1156    cccagtaccatgaagatcaag 1176
               ||||| |||||||||||||||
Sbjct: 1165041 cccagcaccatgaagatcaag 1165061



 Score = 97.6 bits (49), Expect = 1e-17
 Identities = 83/93 (89%), Gaps = 1/93 (1%)
 Strand = Plus / Plus

                                                                           
Query: 1192    gagcggaagtactcggtctggatcggaggctctatcctggcctctctctccacctt-cag 1250
               ||||| ||||||||||| |||||||| ||||| ||||||||||| || |||||||| |||
Sbjct: 1165168 gagcgcaagtactcggtgtggatcgggggctccatcctggcctcgctgtccaccttccag 1165227

                                                
Query: 1251    cagatgtggatcagcaagccagagtatgacgag 1283
               |||||||||||||||||||  ||||| ||||||
Sbjct: 1165228 cagatgtggatcagcaagcaggagtacgacgag 1165260


>Sscrofa_Chr01 
||          Length = 315321322

 Score =  325 bits (164), Expect = 4e-86
 Identities = 281/320 (87%)
 Strand = Plus / Plus

                                                                             
Query: 322       atggtgggaatgggccagaaagacagctacgtgggggatgaggctcagagcaagcgaggg 381
                 |||||||| ||||| ||||| ||   ||||||||| || ||||| |||||||||||||| 
Sbjct: 152414269 atggtgggtatgggtcagaaggattcctacgtgggtgacgaggcccagagcaagcgaggt 152414328

                                                                             
Query: 382       atcctaactctcaaataccccattgaacacggcatcatcaccaactgggatgacatggag 441
                 || || || ||||| || |||||||| || ||||||||||||||||||||||||||||||
Sbjct: 152414329 attctgaccctcaagtatcccattgagcatggcatcatcaccaactgggatgacatggag 152414388

                                                                             
Query: 442       aagatctggcaccactccttctacaacgagctgcgggtagcacctgaggagcaccccacc 501
                 ||||||||||||||| |||||||||||||||| || ||||| || ||||||||||| || 
Sbjct: 152414389 aagatctggcaccacaccttctacaacgagctccgtgtagcccccgaggagcaccctact 152414448

                                                                             
Query: 502       ctgctcacggaggcccccctaaatcccaaggccaacagggagaagatgacccagatcatg 561
                 |||||||| ||||||||||| || |||||||||||| | |||||||||||||||||||||
Sbjct: 152414449 ctgctcactgaggcccccctgaaccccaaggccaaccgcgagaagatgacccagatcatg 152414508

                                                                             
Query: 562       ttcgaaaccttcaatgtccctgccatgtacgttgccattcaagctgtgctctccctctat 621
                 || |||||||||||||||||||||||||| || ||||| || || ||||| |||||||||
Sbjct: 152414509 tttgaaaccttcaatgtccctgccatgtatgtggccatccaggcggtgctgtccctctat 152414568

                                     
Query: 622       gcttccggccgcacaacagg 641
                 ||||| ||||| || |||||
Sbjct: 152414569 gcttctggccgtaccacagg 152414588



 Score =  176 bits (89), Expect = 2e-41
 Identities = 167/193 (86%)
 Strand = Plus / Plus

                                                                             
Query: 800       cagctgaacgagaaatcgtgcgagacatcaaggagaagctgtgctatgtggccctggact 859
                 ||||||| || ||||| || || ||||| || ||||||||||||||||| |||||||| |
Sbjct: 152415580 cagctgagcgtgaaattgttcgtgacattaaagagaagctgtgctatgttgccctggatt 152415639

                                                                             
Query: 860       ttgagaacgagatggccacggcagcctcctcttcctccctggagaagagctatgagctgc 919
                 ||||||| |||||||| || || || || || |||||| |||||||||||||||| ||||
Sbjct: 152415640 ttgagaatgagatggctacagctgcttcttcctcctccttggagaagagctatgaactgc 152415699

                                                                             
Query: 920       cggacggacaggtcatcaccatcggcaatgagcgcttccgctgcccggagaccctcttcc 979
                 | || || ||||||||||| || ||||||||||||||||||||||| ||||| |||||||
Sbjct: 152415700 ctgatggccaggtcatcactattggcaatgagcgcttccgctgccctgagacgctcttcc 152415759

                              
Query: 980       agccttccttcat 992
                 |||| ||||||||
Sbjct: 152415760 agccctccttcat 152415772



 Score =  127 bits (64), Expect = 2e-26
 Identities = 139/164 (84%)
 Strand = Plus / Plus

                                                                             
Query: 637       acaggcatcgtcctggattccggggatggcgtcacccacaatgtccctatctatgaggga 696
                 |||||||| || || || || ||||||||||| |||||||| ||||| || || ||||| 
Sbjct: 152415233 acaggcattgttctagactctggggatggcgtaacccacaacgtccccatttacgagggc 152415292

                                                                             
Query: 697       tacgcactgccccacgccatcatgcgcctggatctggctggccgcgacctcacggactac 756
                 || ||  |||| || ||||||||||| |||||||||||||| || || ||||| ||||||
Sbjct: 152415293 tatgccttgccacatgccatcatgcgtctggatctggctggtcgggatctcactgactac 152415352

                                                             
Query: 757       ctcatgaagatcctcacagagagaggctactcctttgtgaccac 800
                 ||||||||||||||||| ||| | |||||||||||||| |||||
Sbjct: 152415353 ctcatgaagatcctcactgagcgtggctactcctttgtcaccac 152415396



 Score =  103 bits (52), Expect = 2e-19
 Identities = 107/124 (86%), Gaps = 1/124 (0%)
 Strand = Plus / Plus

                                                                             
Query: 1175      agattattgctcccccagagcggaagtactcggtctggatcggaggctctatcctggcct 1234
                 |||||||||||||||| ||||| |||||||| |||||||| || ||||| |||||||| |
Sbjct: 152417288 agattattgctccccctgagcgtaagtactctgtctggattgggggctccatcctggcat 152417347

                                                                             
Query: 1235      ctctctccacctt-cagcagatgtggatcagcaagccagagtatgacgaggcagggcctt 1293
                 |  | |||||||| || ||||||||||| ||||||| ||||||||| |||||||| || |
Sbjct: 152417348 ccttgtccaccttccaacagatgtggattagcaagcaagagtatgatgaggcaggcccat 152417407

                     
Query: 1294      ccat 1297
                 ||||
Sbjct: 152417408 ccat 152417411



 Score = 99.6 bits (50), Expect = 4e-18
 Identities = 101/118 (85%)
 Strand = Plus / Plus

                                                                             
Query: 199       gaggagaccaccgcgcttgtgtgtgacaatggctctggcctgtgcaaggctggcttcgca 258
                 |||||||||||||| || ||||| ||||| ||||| || |||   |||||||||||||||
Sbjct: 152412984 gaggagaccaccgccctggtgtgcgacaacggctccgggctggtaaaggctggcttcgca 152413043

                                                                           
Query: 259       ggagatgacgctccccgggccgtctttccttccatcgtgggtcgccctcgccaccagg 316
                 || || ||||||||||| || ||||| ||||||||||| || ||||| ||||||||||
Sbjct: 152413044 ggcgacgacgctccccgcgcggtcttcccttccatcgtaggccgcccgcgccaccagg 152413101



 Score = 87.7 bits (44), Expect = 1e-14
 Identities = 146/180 (81%)
 Strand = Plus / Plus

                                                                             
Query: 997       atggagtcagctggaattcatgaaacaacctacaattccatcatgaagtgtgacattgac 1056
                 ||||| || ||||| || |||||||| || |||||   ||||||||| ||||||||||| 
Sbjct: 152416556 atggaatctgctggcatccatgaaacgacttacaacagcatcatgaaatgtgacattgat 152416615

                                                                             
Query: 1057      atccgcaaagacttatacgccaacaacgtcctctctgggggtaccactatgtatcctggc 1116
                 || ||||| ||| | || || ||||| ||| | ||||| |||||||| ||||| || || 
Sbjct: 152416616 attcgcaaggacctgtatgctaacaatgtcttatctggaggtaccaccatgtacccaggt 152416675

                                                                             
Query: 1117      attgccgacaggatgcagaaggagatcacagccctggcccccagtaccatgaagatcaag 1176
                 ||||| ||  | ||||| ||||| ||||| |||||||| ||||| |||||||||||||||
Sbjct: 152416676 attgctgatcgcatgcaaaaggaaatcactgccctggctcccagcaccatgaagatcaag 152416735


>Sscrofa_Chr14 
||          Length = 153851969

 Score =  317 bits (160), Expect = 9e-84
 Identities = 280/320 (87%)
 Strand = Plus / Plus

                                                                            
Query: 313      cagggtgtaatggtgggaatgggccagaaagacagctacgtgggggatgaggctcagagc 372
                ||||| || |||||||| ||||| ||||||||   ||||||||| || ||||||||||||
Sbjct: 65237534 cagggcgtcatggtgggtatgggtcagaaagattcctacgtgggcgacgaggctcagagc 65237593

                                                                            
Query: 373      aagcgagggatcctaactctcaaataccccattgaacacggcatcatcaccaactgggat 432
                ||| |||| ||||| || ||||| |||||||| || ||||||||||||||||||||||| 
Sbjct: 65237594 aagagaggtatcctgaccctcaagtaccccatcgagcacggcatcatcaccaactgggac 65237653

                                                                            
Query: 433      gacatggagaagatctggcaccactccttctacaacgagctgcgggtagcacctgaggag 492
                |||||||||||||||||||||||| |||||||||||||||| ||||| || || ||||||
Sbjct: 65237654 gacatggagaagatctggcaccacaccttctacaacgagctccgggtggcccccgaggag 65237713

                                                                            
Query: 493      caccccaccctgctcacggaggcccccctaaatcccaaggccaacagggagaagatgacc 552
                ||||||||||||||||| ||||||||||| || |||||||||||| | ||||||||||| 
Sbjct: 65237714 caccccaccctgctcaccgaggcccccctcaaccccaaggccaaccgcgagaagatgact 65237773

                                                                            
Query: 553      cagatcatgttcgaaaccttcaatgtccctgccatgtacgttgccattcaagctgtgctc 612
                ||||||||||| || |||||||| || || ||||||||||| ||||| || || ||||| 
Sbjct: 65237774 cagatcatgtttgagaccttcaacgtgcccgccatgtacgtggccatccaggcagtgctg 65237833

                                    
Query: 613      tccctctatgcttccggccg 632
                |||||||| || ||||||||
Sbjct: 65237834 tccctctacgcctccggccg 65237853



 Score =  254 bits (128), Expect = 1e-64
 Identities = 179/196 (91%)
 Strand = Plus / Plus

                                                                            
Query: 800      cagctgaacgagaaatcgtgcgagacatcaaggagaagctgtgctatgtggccctggact 859
                ||||||| || || |||||||| ||||||||||||||||| ||||| |||||||||||||
Sbjct: 65238240 cagctgagcgcgagatcgtgcgcgacatcaaggagaagctatgctacgtggccctggact 65238299

                                                                            
Query: 860      ttgagaacgagatggccacggcagcctcctcttcctccctggagaagagctatgagctgc 919
                | ||||||||||||||||| || |||||||| |||||||||||||||||||| |||||||
Sbjct: 65238300 tcgagaacgagatggccaccgccgcctcctcctcctccctggagaagagctacgagctgc 65238359

                                                                            
Query: 920      cggacggacaggtcatcaccatcggcaatgagcgcttccgctgcccggagaccctcttcc 979
                | ||||| |||||||||||||||||||| |||||||||||||||||||| || |||||||
Sbjct: 65238360 cagacggccaggtcatcaccatcggcaacgagcgcttccgctgcccggaaacgctcttcc 65238419

                                
Query: 980      agccttccttcatcgg 995
                |||| |||||||||||
Sbjct: 65238420 agccctccttcatcgg 65238435



 Score =  224 bits (113), Expect = 1e-55
 Identities = 158/173 (91%)
 Strand = Plus / Minus

                                                                             
Query: 823       gacatcaaggagaagctgtgctatgtggccctggactttgagaacgagatggccacggca 882
                 |||||||||||||||||||||||||| |||||||||||||| || ||||||||||| || 
Sbjct: 109858818 gacatcaaggagaagctgtgctatgtagccctggactttgaaaatgagatggccactgcc 109858759

                                                                             
Query: 883       gcctcctcttcctccctggagaagagctatgagctgccggacggacaggtcatcaccatc 942
                 || ||||| |||||||||||||||||||| |||||||| ||||| ||||| |||||||||
Sbjct: 109858758 gcgtcctcctcctccctggagaagagctacgagctgcctgacgggcaggtgatcaccatc 109858699

                                                                      
Query: 943       ggcaatgagcgcttccgctgcccggagaccctcttccagccttccttcatcgg 995
                 || || |||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 109858698 gggaacgagcgcttccgctgcccggagaccctgttccagccctccttcatcgg 109858646



 Score =  167 bits (84), Expect = 2e-38
 Identities = 156/180 (86%)
 Strand = Plus / Minus

                                                                             
Query: 997       atggagtcagctggaattcatgaaacaacctacaattccatcatgaagtgtgacattgac 1056
                 |||||||| ||||| || ||||| || ||||||||   |||||||||||| |||||||||
Sbjct: 109857397 atggagtctgctggcatccatgagaccacctacaacagcatcatgaagtgcgacattgac 109857338

                                                                             
Query: 1057      atccgcaaagacttatacgccaacaacgtcctctctgggggtaccactatgtatcctggc 1116
                 ||| | || ||| | || || |||||||||||||||||||| ||||| ||||| || |||
Sbjct: 109857337 atcaggaaggacctctatgctaacaacgtcctctctgggggcaccaccatgtaccccggc 109857278

                                                                             
Query: 1117      attgccgacaggatgcagaaggagatcacagccctggcccccagtaccatgaagatcaag 1176
                 ||||||||| | |||||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct: 109857277 attgccgaccgcatgcagaaggagatcacagccctggcacccagcaccatgaagatcaag 109857218



 Score =  161 bits (81), Expect = 1e-36
 Identities = 144/165 (87%)
 Strand = Plus / Plus

                                                                            
Query: 638      caggcatcgtcctggattccggggatggcgtcacccacaatgtccctatctatgagggat 697
                |||||||||| || || || || || |||||||||||||| || || ||||||||||| |
Sbjct: 65237981 caggcatcgtgctcgactctggcgacggcgtcacccacaacgtgcccatctatgagggct 65238040

                                                                            
Query: 698      acgcactgccccacgccatcatgcgcctggatctggctggccgcgacctcacggactacc 757
                |||| ||||| |||||||||||||||||||| ||||| |||||||| ||||| |||||||
Sbjct: 65238041 acgcgctgccacacgccatcatgcgcctggacctggccggccgcgatctcaccgactacc 65238100

                                                             
Query: 758      tcatgaagatcctcacagagagaggctactcctttgtgaccacag 802
                | |||||||||||||| ||| | ||||||||||| ||||||||||
Sbjct: 65238101 tgatgaagatcctcaccgagcgtggctactccttcgtgaccacag 65238145



 Score =  133 bits (67), Expect = 3e-28
 Identities = 139/163 (85%)
 Strand = Plus / Minus

                                                                             
Query: 638       caggcatcgtcctggattccggggatggcgtcacccacaatgtccctatctatgagggat 697
                 ||||||| || ||||| || || ||||| ||||||||||| || || || || ||||| |
Sbjct: 109860453 caggcattgtgctggactctggagatggtgtcacccacaacgtgcccatttacgagggct 109860394

                                                                             
Query: 698       acgcactgccccacgccatcatgcgcctggatctggctggccgcgacctcacggactacc 757
                 |||| |||||||||||||||||||| ||||| ||||| ||||| || ||||| |||||||
Sbjct: 109860393 acgccctgccccacgccatcatgcgtctggacctggcgggccgagatctcaccgactacc 109860334

                                                            
Query: 758       tcatgaagatcctcacagagagaggctactcctttgtgaccac 800
                 ||||||||||||| || ||| | ||||||||||| ||||||||
Sbjct: 109860333 tcatgaagatcctgacggagcgtggctactccttcgtgaccac 109860291



 Score =  109 bits (55), Expect = 4e-21
 Identities = 151/183 (82%)
 Strand = Plus / Plus

                                                                            
Query: 994      ggcatggagtcagctggaattcatgaaacaacctacaattccatcatgaagtgtgacatt 1053
                ||||||||||| || || || ||||| || ||||||||   |||||||||||| ||||| 
Sbjct: 65238528 ggcatggagtcggcgggcatccatgagactacctacaacagcatcatgaagtgcgacatc 65238587

                                                                            
Query: 1054     gacatccgcaaagacttatacgccaacaacgtcctctctgggggtaccactatgtatcct 1113
                || ||| | || ||| | ||||||||||| ||| | || ||||| ||||| ||||| || 
Sbjct: 65238588 gatatcaggaaggacctgtacgccaacaatgtcatgtcagggggcaccaccatgtacccg 65238647

                                                                            
Query: 1114     ggcattgccgacaggatgcagaaggagatcacagccctggcccccagtaccatgaagatc 1173
                ||||| || ||| | ||||||||||||||||| || ||||||||||| ||||||||||||
Sbjct: 65238648 ggcatcgctgaccgcatgcagaaggagatcaccgctctggcccccagcaccatgaagatc 65238707

                   
Query: 1174     aag 1176
                |||
Sbjct: 65238708 aag 65238710



 Score =  105 bits (53), Expect = 6e-20
 Identities = 98/113 (86%)
 Strand = Plus / Minus

                                                                             
Query: 443       agatctggcaccactccttctacaacgagctgcgggtagcacctgaggagcaccccaccc 502
                 |||||||||||||||| |||||||| ||||| || || || || || ||||| || ||||
Sbjct: 109863454 agatctggcaccactctttctacaatgagcttcgtgttgccccagaagagcatccgaccc 109863395

                                                                      
Query: 503       tgctcacggaggcccccctaaatcccaaggccaacagggagaagatgacccag 555
                 ||||||| ||||| ||||| || |||||||||||| |||||||||||||||||
Sbjct: 109863394 tgctcaccgaggcacccctgaaccccaaggccaaccgggagaagatgacccag 109863342



 Score =  101 bits (51), Expect = 1e-18
 Identities = 102/119 (85%)
 Strand = Plus / Minus

                                                                             
Query: 322       atggtgggaatgggccagaaagacagctacgtgggggatgaggctcagagcaagcgaggg 381
                 |||||||||||||| || ||||||||||||||||| || || || || |||||  |||| 
Sbjct: 109866042 atggtgggaatgggacaaaaagacagctacgtgggtgacgaagcccaaagcaaaagagga 109865983

                                                                            
Query: 382       atcctaactctcaaataccccattgaacacggcatcatcaccaactgggatgacatgga 440
                 ||||| ||  | || ||||| || |||||||||||||||||||||||||||||||||||
Sbjct: 109865982 atcctgaccttgaagtacccaatagaacacggcatcatcaccaactgggatgacatgga 109865924



 Score = 85.7 bits (43), Expect = 6e-14
 Identities = 83/95 (87%), Gaps = 1/95 (1%)
 Strand = Plus / Plus

                                                                            
Query: 1192     gagcggaagtactcggtctggatcggaggctctatcctggcctctctctccacctt-cag 1250
                ||||| |||||||| || |||||||| ||||| ||||||||||| || |||||||| |||
Sbjct: 65238809 gagcgcaagtactccgtgtggatcggcggctccatcctggcctcgctgtccaccttccag 65238868

                                                   
Query: 1251     cagatgtggatcagcaagccagagtatgacgaggc 1285
                ||||||||||||| |||||  ||||| ||||||||
Sbjct: 65238869 cagatgtggatcaccaagcaggagtacgacgaggc 65238903



 Score = 81.8 bits (41), Expect = 9e-13
 Identities = 101/121 (83%)
 Strand = Plus / Plus

                                                                            
Query: 196      gaagaggagaccaccgcgcttgtgtgtgacaatggctctggcctgtgcaaggctggcttc 255
                ||||| ||||||||||| |||||||| ||||||||||| ||||||   || || ||||||
Sbjct: 65237311 gaagacgagaccaccgcccttgtgtgcgacaatggctccggcctggtgaaagccggcttc 65237370

                                                                            
Query: 256      gcaggagatgacgctccccgggccgtctttccttccatcgtgggtcgccctcgccaccag 315
                || || || ||||| ||  |||| || || || ||||||||||| |||||||||||||||
Sbjct: 65237371 gccggtgacgacgcccctagggctgtgttcccgtccatcgtgggccgccctcgccaccag 65237430

                 
Query: 316      g 316
                |
Sbjct: 65237431 g 65237431



 Score = 81.8 bits (41), Expect = 9e-13
 Identities = 105/125 (84%), Gaps = 1/125 (0%)
 Strand = Plus / Minus

                                                                             
Query: 1175      agattattgctcccccagagcggaagtactcggtctggatcggaggctctatcctggcct 1234
                 |||| ||||| || || ||||| || ||||| |||||||| || ||||| ||||||||||
Sbjct: 109853150 agatcattgcccctcctgagcgcaaatactccgtctggattggtggctccatcctggcct 109853091

                                                                             
Query: 1235      ctctctccacctt-cagcagatgtggatcagcaagccagagtatgacgaggcagggcctt 1293
                 |||| |||||||| ||||| |||||||||||||| |  ||||| ||||| || ||||| |
Sbjct: 109853090 ctctgtccaccttccagcaaatgtggatcagcaaacaggagtacgacgaagccgggccgt 109853031

                      
Query: 1294      ccatt 1298
                 |||||
Sbjct: 109853030 ccatt 109853026


>Sscrofa_Chr16 
||          Length = 86898991

 Score =  283 bits (143), Expect = 1e-73
 Identities = 449/551 (81%)
 Strand = Plus / Minus

                                                                            
Query: 310      caccagggtgtaatggtgggaatgggccagaaagacagctacgtgggggatgaggctcag 369
                |||||||| || ||||| || ||||||||||| ||| |||| ||||||||||| || |||
Sbjct: 38871056 caccagggcgtcatggtaggcatgggccagaaggactgctatgtgggggatgaagcccag 38870997

                                                                            
Query: 370      agcaagcgagggatcctaactctcaaataccccattgaacacggcatcatcaccaactgg 429
                |||||| | || ||||| || || || || |||||||| || ||  |  |||||||||||
Sbjct: 38870996 agcaagaggggcatcctgaccctgaagtatcccattgagcatggagtggtcaccaactgg 38870937

                                                                            
Query: 430      gatgacatggagaagatctggcaccactccttctacaacgagctgcgggtagcacctgag 489
                ||||||||||||||||||||||||||| | |||||||| ||||| || || ||||| || 
Sbjct: 38870936 gatgacatggagaagatctggcaccacactttctacaatgagctccgtgtggcaccagat 38870877

                                                                            
Query: 490      gagcaccccaccctgctcacggaggcccccctaaatcccaaggccaacagggagaagatg 549
                |||||||||| ||| ||||| ||||||||||| || ||||||  |||| | ||||| |||
Sbjct: 38870876 gagcaccccatcctcctcaccgaggcccccctcaaccccaagatcaaccgagagaaaatg 38870817

                                                                            
Query: 550      acccagatcatgttcgaaaccttcaatgtccctgccatgtacgttgccattcaagctgtg 609
                || ||||||||||||||  | |||||    ||||||||||| || || || || ||||||
Sbjct: 38870816 actcagatcatgttcgaggctttcaacacacctgccatgtatgtggctatccaggctgtg 38870757

                                                                            
Query: 610      ctctccctctatgcttccggccgcacaacaggcatcgtcctggattccggggatggcgtc 669
                 | ||||||||||| || ||||| || || ||||||||  ||||||| |||||||| |||
Sbjct: 38870756 ttatccctctatgcctcgggccggaccactggcatcgtgatggattctggggatggggtc 38870697

                                                                            
Query: 670      acccacaatgtccctatctatgagggatacgcactgccccacgccatcatgcgcctggat 729
                || ||||  || || |||||||| || ||||| |||||||| |||||| | || ||||| 
Sbjct: 38870696 actcacacagtgcccatctatgaaggctacgccctgccccatgccatcctccgtctggac 38870637

                                                                            
Query: 730      ctggctggccgcgacctcacggactacctcatgaagatcctcacagagagaggctactcc 789
                ||||||||| | ||||| || |||||||||||||||||||| || ||  ||||||||  |
Sbjct: 38870636 ctggctggcagagacctgactgactacctcatgaagatcctgacggaacgaggctacaac 38870577

                                                                            
Query: 790      tttgtgaccacagctgaacgagaaatcgtgcgagacatcaaggagaagctgtgctatgtg 849
                |||   |||||||| || || || || || || ||  |||| |||||||||||||| |||
Sbjct: 38870576 tttaccaccacagccgagcgggagattgtccgcgatgtcaaagagaagctgtgctacgtg 38870517

                           
Query: 850      gccctggactt 860
                |||||||||||
Sbjct: 38870516 gccctggactt 38870506


>Sscrofa_Chr13 
||          Length = 218635234

 Score = 87.7 bits (44), Expect = 1e-14
 Identities = 70/78 (89%), Gaps = 3/78 (3%)
 Strand = Plus / Minus

                                                                             
Query: 419       tcaccaactgggatgacatggagaagatctggcaccactccttctacaacgagctgcggg 478
                 |||||||||||||||||||||||||||||||||||||| |   |||||| |||||||| |
Sbjct: 154029056 tcaccaactgggatgacatggagaagatctggcaccacac---ctacaatgagctgcgtg 154029000

                                   
Query: 479       tagcacctgaggagcacc 496
                 | || |||||||||||||
Sbjct: 154028999 tggcccctgaggagcacc 154028982


  Database: Sscrofa_10.2.fasta
    Posted date:  Nov 16, 2011 10:34 AM
  Number of letters in database: 2,808,509,378
  Number of sequences in database:  4582
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 33,857,646
Number of extensions: 265
Number of successful extensions: 265
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 253
Number of HSP's successfully gapped: 38
Length of query: 1318
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 1297
Effective length of database: 2,808,413,156
Effective search space: 3642511863332
Effective search space used: 3642511863332
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)