Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-001666
(2428 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001035577.1| elongation factor 1-gamma [Bos taurus]. 802 0.0
Alignment gi|XP_581858.2| PREDICTED: valyl-tRNA synthetase-like [Bos taur... 119 1e-26
>ref|NP_001035577.1| elongation factor 1-gamma [Bos taurus].
Length = 440
Score = 802 bits (2072), Expect = 0.0
Identities = 394/440 (89%), Positives = 399/440 (90%), Gaps = 3/440 (0%)
Frame = +2
Query: 29 MAAGTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTNHTPEFLRKFPAGKVPA 208
MAAGTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTN TPEFLRKFPAGKVPA
Sbjct: 1 MAAGTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTNRTPEFLRKFPAGKVPA 60
Query: 209 FEGDDGFCVFESNAIAYYVSNEELRGSTPEAAAQVVQWVSFADSDIVPPASTWVFPTLGI 388
FEGDDGFCVFESNAIAYYVSNEELRGSTPEAAAQVVQWVSFADSDIVPPASTWVFPTLGI
Sbjct: 61 FEGDDGFCVFESNAIAYYVSNEELRGSTPEAAAQVVQWVSFADSDIVPPASTWVFPTLGI 120
Query: 389 MHYNKQATENAKDEVRRVLGLLDAHLKTRTFLVGERVTLADITVVCTLLWLYKQVLEPSF 568
MH+NKQATENAK+EVRR+LGLLDAHLKTRTFLVGERVTLADITVVCTLLWLYKQVLEPSF
Sbjct: 121 MHHNKQATENAKEEVRRILGLLDAHLKTRTFLVGERVTLADITVVCTLLWLYKQVLEPSF 180
Query: 569 RQAFPNTNRWFLTCINQPQFRAVLGEVKLCEKMAQFDAKKFAESQPKKDTPRKEKGSR-- 742
RQAFPNTNRWFLTCINQPQFRAVLGEVKLCEKMAQFDAKKFAESQPKKDTPRKEKGSR
Sbjct: 181 RQAFPNTNRWFLTCINQPQFRAVLGEVKLCEKMAQFDAKKFAESQPKKDTPRKEKGSREE 240
Query: 743 -XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPKAKDPFAHLPKSTFVLDEFKRKY 919
PKAKDPFAHLPKSTFVLDEFKRKY
Sbjct: 241 KLKPQAERKEGKEEKKAAAPAPEEELDECEQALAAEPKAKDPFAHLPKSTFVLDEFKRKY 300
Query: 920 SNEDTLSVALPYFWEHFDKDGWSLWYSEYRFPEELTQTFMSCNLITGMFQRLDKLRKNAF 1099
SNEDTLSVALPYFW+HFDKDGWSLWYSEYRFPEELTQTFMSCNLITGMFQRLDKLRKNAF
Sbjct: 301 SNEDTLSVALPYFWDHFDKDGWSLWYSEYRFPEELTQTFMSCNLITGMFQRLDKLRKNAF 360
Query: 1100 ASVILFGTNNSSSISGVWVFRGQELAFPLSPDWQVDYESYTWRKLDPGSEETQTLVREYF 1279
ASVILFGTNNSSSISGVW FRGQELAFPLSPDWQVDYESYTWRKLDPGSEETQTLVREYF
Sbjct: 361 ASVILFGTNNSSSISGVWDFRGQELAFPLSPDWQVDYESYTWRKLDPGSEETQTLVREYF 420
Query: 1280 SWEGAYQHVGKAFNQGKIFK 1339
WEGA+QHVGKAFNQGKIFK
Sbjct: 421 CWEGAFQHVGKAFNQGKIFK 440
Score = 539 bits (1388), Expect = e-153
Identities = 269/310 (86%), Positives = 279/310 (90%), Gaps = 3/310 (0%)
Frame = +3
Query: 1506 MAAGTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTNHTPEFLRKFPAGKVPA 1685
MAAGTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTN TPEFLRKFPAGKVPA
Sbjct: 1 MAAGTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTNRTPEFLRKFPAGKVPA 60
Query: 1686 FEGDDGFCVFESNAIAYYVSNEELRGSTPEAAAQVVQWVSFADSDIVPPASTWVFPTLGI 1865
FEGDDGFCVFESNAIAYYVSNEELRGSTPEAAAQVVQWVSFADSDIVPPASTWVFPTLGI
Sbjct: 61 FEGDDGFCVFESNAIAYYVSNEELRGSTPEAAAQVVQWVSFADSDIVPPASTWVFPTLGI 120
Query: 1866 MHYNKQATENAKDEVRRVLGLLDAHLKTRTFLVGERVTLADITVVCTLLWLYKQVLEPSF 2045
MH+NKQATENAK+EVRR+LGLLDAHLKTRTFLVGERVTLADITVVCTLLWLYKQVLEPSF
Sbjct: 121 MHHNKQATENAKEEVRRILGLLDAHLKTRTFLVGERVTLADITVVCTLLWLYKQVLEPSF 180
Query: 2046 RQAFPNTNRWFLTCINQPQFRAVLXEVKLCEKMAQFDAKKFAESQPKKDTPRKEKGSREE 2225
RQAFPNTNRWFLTCINQPQFRAVL EVKLCEKMAQFDAKKFAESQPKKDTPRKEKGSREE
Sbjct: 181 RQAFPNTNRWFLTCINQPQFRAVLGEVKLCEKMAQFDAKKFAESQPKKDTPRKEKGSREE 240
Query: 2226 EQKPQ---XXXXXXXXXXXXXXXXXLDKCNQAPAS*PQAKDPFAHLPKITFVLEKFNRNL 2396
+ KPQ LD+C QA A+ P+AKDPFAHLPK TFVL++F R
Sbjct: 241 KLKPQAERKEGKEEKKAAAPAPEEELDECEQALAAEPKAKDPFAHLPKSTFVLDEFKRKY 300
Query: 2397 LNKDTLSVAL 2426
N+DTLSVAL
Sbjct: 301 SNEDTLSVAL 310
>ref|XP_581858.2| PREDICTED: valyl-tRNA synthetase-like [Bos taurus].
Length = 1252
Score = 119 bits (298), Expect = 1e-26
Identities = 79/212 (37%), Positives = 115/212 (54%), Gaps = 11/212 (5%)
Frame = +2
Query: 53 YPENWRAFKALIAAQYS---------GAQVRVLSAPPHFHFGQTNHTPEFLRKFPAGKVP 205
+P+ + + +ALIAA+Y GA RV PP + TP FP ++P
Sbjct: 9 HPDAFPSLRALIAARYGEAGEGPGWGGAHPRVCLQPP-----PASRTP-----FPPPRLP 58
Query: 206 AFE-GDDGFCVFESNAIAYYVSNEELRGSTPEAAAQVVQ-WVSFADSDIVPPASTWVFPT 379
A E G G V+ + A++ + L G AA +VQ WVS+AD++++P A P
Sbjct: 59 ALEQGPGGLWVWGATAVSQLLWPAGLGGPGGSRAAVLVQQWVSYADTELIPAACGATLPA 118
Query: 380 LGIMHYNKQATENAKDEVRRVLGLLDAHLKTRTFLVGERVTLADITVVCTLLWLYKQVLE 559
LG+ + Q + A + R L L+ L+ T+L GE TLAD+ V LL ++ VL+
Sbjct: 119 LGLRS-SAQDPQAALAALGRALSPLEEWLRLHTYLAGEAPTLADLAAVTALLLPFRYVLD 177
Query: 560 PSFRQAFPNTNRWFLTCINQPQFRAVLGEVKL 655
PS R+ + N RWF+TC+ QP+FRAVLGEV L
Sbjct: 178 PSARRIWGNVTRWFITCVQQPEFRAVLGEVVL 209
Score = 117 bits (294), Expect = 4e-26
Identities = 84/246 (34%), Positives = 126/246 (51%), Gaps = 11/246 (4%)
Frame = +3
Query: 1530 YPENWRAFKALIAAQYS---------GAQVRVLSAPPHFHFGQTNHTPEFLRKFPAGKVP 1682
+P+ + + +ALIAA+Y GA RV PP + TP FP ++P
Sbjct: 9 HPDAFPSLRALIAARYGEAGEGPGWGGAHPRVCLQPP-----PASRTP-----FPPPRLP 58
Query: 1683 AFE-GDDGFCVFESNAIAYYVSNEELRGSTPEAAAQVVQ-WVSFADSDIVPPASTWVFPT 1856
A E G G V+ + A++ + L G AA +VQ WVS+AD++++P A P
Sbjct: 59 ALEQGPGGLWVWGATAVSQLLWPAGLGGPGGSRAAVLVQQWVSYADTELIPAACGATLPA 118
Query: 1857 LGIMHYNKQATENAKDEVRRVLGLLDAHLKTRTFLVGERVTLADITVVCTLLWLYKQVLE 2036
LG+ + Q + A + R L L+ L+ T+L GE TLAD+ V LL ++ VL+
Sbjct: 119 LGLRS-SAQDPQAALAALGRALSPLEEWLRLHTYLAGEAPTLADLAAVTALLLPFRYVLD 177
Query: 2037 PSFRQAFPNTNRWFLTCINQPQFRAVLXEVKLCEKMAQFDAKKFAESQPKKDTPRKEKGS 2216
PS R+ + N RWF+TC+ QP+FRAVL EV L A+ ++ ++ +E G
Sbjct: 178 PSARRIWGNVTRWFITCVQQPEFRAVLGEVVLYS-----GARSLSQQPGIAESMGQELGD 232
Query: 2217 REEEQK 2234
EQK
Sbjct: 233 ARWEQK 238
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 95,646,495
Number of extensions: 2775694
Number of successful extensions: 11011
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 10982
Number of HSP's successfully gapped: 5
Length of query: 809
Length of database: 17,681,374
Length adjustment: 110
Effective length of query: 699
Effective length of database: 14,041,694
Effective search space: 9815144106
Effective search space used: 9815144106
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-001666
(2428 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_853577.1| PREDICTED: similar to Elongation factor 1-gamma... 807 0.0
Alignment gi|XP_867760.1| PREDICTED: similar to Elongation factor 1-gamma... 800 0.0
Alignment gi|XP_859367.1| PREDICTED: similar to Elongation factor 1-gamma... 795 0.0
Alignment gi|XP_849510.1| PREDICTED: similar to Elongation factor 1-gamma... 795 0.0
Alignment gi|XP_861367.1| PREDICTED: similar to Elongation factor 1-gamma... 788 0.0
Alignment gi|XP_850257.1| PREDICTED: similar to Elongation factor 1-gamma... 788 0.0
Alignment gi|XP_856191.1| PREDICTED: similar to Elongation factor 1-gamma... 771 0.0
Alignment gi|XP_848460.1| PREDICTED: similar to Elongation factor 1-gamma... 768 0.0
Alignment gi|XP_867777.1| PREDICTED: similar to Elongation factor 1-gamma... 763 0.0
Alignment gi|XP_867742.1| PREDICTED: similar to Elongation factor 1-gamma... 735 0.0
>ref|XP_853577.1| PREDICTED: similar to Elongation factor 1-gamma (EF-1-gamma) (eEF-1B
gamma) isoform 1 [Canis familiaris].
Length = 437
Score = 807 bits (2084), Expect = 0.0
Identities = 392/437 (89%), Positives = 399/437 (91%)
Frame = +2
Query: 29 MAAGTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTNHTPEFLRKFPAGKVPA 208
MAAGTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTN TPEFLRKFPAGKVPA
Sbjct: 1 MAAGTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTNRTPEFLRKFPAGKVPA 60
Query: 209 FEGDDGFCVFESNAIAYYVSNEELRGSTPEAAAQVVQWVSFADSDIVPPASTWVFPTLGI 388
FEGDDGFCVFESNAIAYYVSNEELRG+TPEAAAQVVQWVSFADSDIVPPASTWVFPTLGI
Sbjct: 61 FEGDDGFCVFESNAIAYYVSNEELRGNTPEAAAQVVQWVSFADSDIVPPASTWVFPTLGI 120
Query: 389 MHYNKQATENAKDEVRRVLGLLDAHLKTRTFLVGERVTLADITVVCTLLWLYKQVLEPSF 568
MH+NKQATENAK+EVRR+LGLLD HLKTRTFLVGERVTLADITVVCTLLWLYKQVLEPSF
Sbjct: 121 MHHNKQATENAKEEVRRILGLLDTHLKTRTFLVGERVTLADITVVCTLLWLYKQVLEPSF 180
Query: 569 RQAFPNTNRWFLTCINQPQFRAVLGEVKLCEKMAQFDAKKFAESQPKKDTPRKEKGSRXX 748
RQAFPNTNRWFLTCINQPQFRAVLGEVKLCEKMAQFDAKKFAESQPKKDTPRKEKGSR
Sbjct: 181 RQAFPNTNRWFLTCINQPQFRAVLGEVKLCEKMAQFDAKKFAESQPKKDTPRKEKGSREE 240
Query: 749 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPKAKDPFAHLPKSTFVLDEFKRKYSNE 928
PKAKDPFAHLPKSTFVLDEFKRKYSNE
Sbjct: 241 KQKPQAERKEEKKAAAPAPEEEMDECEQALAAEPKAKDPFAHLPKSTFVLDEFKRKYSNE 300
Query: 929 DTLSVALPYFWEHFDKDGWSLWYSEYRFPEELTQTFMSCNLITGMFQRLDKLRKNAFASV 1108
DTL+VALPYFWEHFDKDGWSLWY+EYRFPEELTQTFMSCNLITGMFQRLDKLRKNAFASV
Sbjct: 301 DTLTVALPYFWEHFDKDGWSLWYAEYRFPEELTQTFMSCNLITGMFQRLDKLRKNAFASV 360
Query: 1109 ILFGTNNSSSISGVWVFRGQELAFPLSPDWQVDYESYTWRKLDPGSEETQTLVREYFSWE 1288
ILFGTNNSSSISGVWVFRGQELAFPLSPDWQVDYESYTWRKLDPGSEETQTLVREYFSWE
Sbjct: 361 ILFGTNNSSSISGVWVFRGQELAFPLSPDWQVDYESYTWRKLDPGSEETQTLVREYFSWE 420
Query: 1289 GAYQHVGKAFNQGKIFK 1339
GA+QHVGK FNQGKIFK
Sbjct: 421 GAFQHVGKTFNQGKIFK 437
Score = 542 bits (1397), Expect = e-154
Identities = 266/307 (86%), Positives = 279/307 (90%)
Frame = +3
Query: 1506 MAAGTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTNHTPEFLRKFPAGKVPA 1685
MAAGTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTN TPEFLRKFPAGKVPA
Sbjct: 1 MAAGTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTNRTPEFLRKFPAGKVPA 60
Query: 1686 FEGDDGFCVFESNAIAYYVSNEELRGSTPEAAAQVVQWVSFADSDIVPPASTWVFPTLGI 1865
FEGDDGFCVFESNAIAYYVSNEELRG+TPEAAAQVVQWVSFADSDIVPPASTWVFPTLGI
Sbjct: 61 FEGDDGFCVFESNAIAYYVSNEELRGNTPEAAAQVVQWVSFADSDIVPPASTWVFPTLGI 120
Query: 1866 MHYNKQATENAKDEVRRVLGLLDAHLKTRTFLVGERVTLADITVVCTLLWLYKQVLEPSF 2045
MH+NKQATENAK+EVRR+LGLLD HLKTRTFLVGERVTLADITVVCTLLWLYKQVLEPSF
Sbjct: 121 MHHNKQATENAKEEVRRILGLLDTHLKTRTFLVGERVTLADITVVCTLLWLYKQVLEPSF 180
Query: 2046 RQAFPNTNRWFLTCINQPQFRAVLXEVKLCEKMAQFDAKKFAESQPKKDTPRKEKGSREE 2225
RQAFPNTNRWFLTCINQPQFRAVL EVKLCEKMAQFDAKKFAESQPKKDTPRKEKGSREE
Sbjct: 181 RQAFPNTNRWFLTCINQPQFRAVLGEVKLCEKMAQFDAKKFAESQPKKDTPRKEKGSREE 240
Query: 2226 EQKPQXXXXXXXXXXXXXXXXXLDKCNQAPAS*PQAKDPFAHLPKITFVLEKFNRNLLNK 2405
+QKPQ +D+C QA A+ P+AKDPFAHLPK TFVL++F R N+
Sbjct: 241 KQKPQAERKEEKKAAAPAPEEEMDECEQALAAEPKAKDPFAHLPKSTFVLDEFKRKYSNE 300
Query: 2406 DTLSVAL 2426
DTL+VAL
Sbjct: 301 DTLTVAL 307
>ref|XP_867760.1| PREDICTED: similar to Elongation factor 1-gamma (EF-1-gamma) (eEF-1B
gamma) isoform 20 [Canis familiaris].
Length = 445
Score = 800 bits (2065), Expect = 0.0
Identities = 392/445 (88%), Positives = 399/445 (89%), Gaps = 8/445 (1%)
Frame = +2
Query: 29 MAAGTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTNHTPEFLRKFPAGKVPA 208
MAAGTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTN TPEFLRKFPAGKVPA
Sbjct: 1 MAAGTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTNRTPEFLRKFPAGKVPA 60
Query: 209 FEGDDGFCVFESNAIAYYVSNEELRGSTPEAAAQVVQWVSFADSDIVPPASTWVFPTLGI 388
FEGDDGFCVFESNAIAYYVSNEELRG+TPEAAAQVVQWVSFADSDIVPPASTWVFPTLGI
Sbjct: 61 FEGDDGFCVFESNAIAYYVSNEELRGNTPEAAAQVVQWVSFADSDIVPPASTWVFPTLGI 120
Query: 389 MHYNKQ--------ATENAKDEVRRVLGLLDAHLKTRTFLVGERVTLADITVVCTLLWLY 544
MH+NKQ ATENAK+EVRR+LGLLD HLKTRTFLVGERVTLADITVVCTLLWLY
Sbjct: 121 MHHNKQKMGMSQNFATENAKEEVRRILGLLDTHLKTRTFLVGERVTLADITVVCTLLWLY 180
Query: 545 KQVLEPSFRQAFPNTNRWFLTCINQPQFRAVLGEVKLCEKMAQFDAKKFAESQPKKDTPR 724
KQVLEPSFRQAFPNTNRWFLTCINQPQFRAVLGEVKLCEKMAQFDAKKFAESQPKKDTPR
Sbjct: 181 KQVLEPSFRQAFPNTNRWFLTCINQPQFRAVLGEVKLCEKMAQFDAKKFAESQPKKDTPR 240
Query: 725 KEKGSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPKAKDPFAHLPKSTFVLDE 904
KEKGSR PKAKDPFAHLPKSTFVLDE
Sbjct: 241 KEKGSREEKQKPQAERKEEKKAAAPAPEEEMDECEQALAAEPKAKDPFAHLPKSTFVLDE 300
Query: 905 FKRKYSNEDTLSVALPYFWEHFDKDGWSLWYSEYRFPEELTQTFMSCNLITGMFQRLDKL 1084
FKRKYSNEDTL+VALPYFWEHFDKDGWSLWY+EYRFPEELTQTFMSCNLITGMFQRLDKL
Sbjct: 301 FKRKYSNEDTLTVALPYFWEHFDKDGWSLWYAEYRFPEELTQTFMSCNLITGMFQRLDKL 360
Query: 1085 RKNAFASVILFGTNNSSSISGVWVFRGQELAFPLSPDWQVDYESYTWRKLDPGSEETQTL 1264
RKNAFASVILFGTNNSSSISGVWVFRGQELAFPLSPDWQVDYESYTWRKLDPGSEETQTL
Sbjct: 361 RKNAFASVILFGTNNSSSISGVWVFRGQELAFPLSPDWQVDYESYTWRKLDPGSEETQTL 420
Query: 1265 VREYFSWEGAYQHVGKAFNQGKIFK 1339
VREYFSWEGA+QHVGK FNQGKIFK
Sbjct: 421 VREYFSWEGAFQHVGKTFNQGKIFK 445
Score = 535 bits (1378), Expect = e-152
Identities = 266/315 (84%), Positives = 279/315 (88%), Gaps = 8/315 (2%)
Frame = +3
Query: 1506 MAAGTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTNHTPEFLRKFPAGKVPA 1685
MAAGTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTN TPEFLRKFPAGKVPA
Sbjct: 1 MAAGTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTNRTPEFLRKFPAGKVPA 60
Query: 1686 FEGDDGFCVFESNAIAYYVSNEELRGSTPEAAAQVVQWVSFADSDIVPPASTWVFPTLGI 1865
FEGDDGFCVFESNAIAYYVSNEELRG+TPEAAAQVVQWVSFADSDIVPPASTWVFPTLGI
Sbjct: 61 FEGDDGFCVFESNAIAYYVSNEELRGNTPEAAAQVVQWVSFADSDIVPPASTWVFPTLGI 120
Query: 1866 MHYNKQ--------ATENAKDEVRRVLGLLDAHLKTRTFLVGERVTLADITVVCTLLWLY 2021
MH+NKQ ATENAK+EVRR+LGLLD HLKTRTFLVGERVTLADITVVCTLLWLY
Sbjct: 121 MHHNKQKMGMSQNFATENAKEEVRRILGLLDTHLKTRTFLVGERVTLADITVVCTLLWLY 180
Query: 2022 KQVLEPSFRQAFPNTNRWFLTCINQPQFRAVLXEVKLCEKMAQFDAKKFAESQPKKDTPR 2201
KQVLEPSFRQAFPNTNRWFLTCINQPQFRAVL EVKLCEKMAQFDAKKFAESQPKKDTPR
Sbjct: 181 KQVLEPSFRQAFPNTNRWFLTCINQPQFRAVLGEVKLCEKMAQFDAKKFAESQPKKDTPR 240
Query: 2202 KEKGSREEEQKPQXXXXXXXXXXXXXXXXXLDKCNQAPAS*PQAKDPFAHLPKITFVLEK 2381
KEKGSREE+QKPQ +D+C QA A+ P+AKDPFAHLPK TFVL++
Sbjct: 241 KEKGSREEKQKPQAERKEEKKAAAPAPEEEMDECEQALAAEPKAKDPFAHLPKSTFVLDE 300
Query: 2382 FNRNLLNKDTLSVAL 2426
F R N+DTL+VAL
Sbjct: 301 FKRKYSNEDTLTVAL 315
>ref|XP_859367.1| PREDICTED: similar to Elongation factor 1-gamma (EF-1-gamma) (eEF-1B
gamma) isoform 13 [Canis familiaris].
Length = 437
Score = 795 bits (2053), Expect = 0.0
Identities = 387/437 (88%), Positives = 396/437 (90%)
Frame = +2
Query: 29 MAAGTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTNHTPEFLRKFPAGKVPA 208
MAAGTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTN TPEFLRKFPAGKVPA
Sbjct: 1 MAAGTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTNRTPEFLRKFPAGKVPA 60
Query: 209 FEGDDGFCVFESNAIAYYVSNEELRGSTPEAAAQVVQWVSFADSDIVPPASTWVFPTLGI 388
FEGDDGFCVFES+AIAYYV+NEELRG+TPEAAAQVVQWVSFADSDIVPPASTWVFPTLGI
Sbjct: 61 FEGDDGFCVFESSAIAYYVNNEELRGNTPEAAAQVVQWVSFADSDIVPPASTWVFPTLGI 120
Query: 389 MHYNKQATENAKDEVRRVLGLLDAHLKTRTFLVGERVTLADITVVCTLLWLYKQVLEPSF 568
MH+NKQATENAK+EVRR+LGLLD HLKTRTFLVG+RVTLADITVVCTLLWLYKQVLEPSF
Sbjct: 121 MHHNKQATENAKEEVRRILGLLDTHLKTRTFLVGKRVTLADITVVCTLLWLYKQVLEPSF 180
Query: 569 RQAFPNTNRWFLTCINQPQFRAVLGEVKLCEKMAQFDAKKFAESQPKKDTPRKEKGSRXX 748
RQAFPNTNRWFLTCINQPQFRAVLGEVKLCEKMAQFDAKKFAESQPKKDTPRKEK SR
Sbjct: 181 RQAFPNTNRWFLTCINQPQFRAVLGEVKLCEKMAQFDAKKFAESQPKKDTPRKEKDSREE 240
Query: 749 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPKAKDPFAHLPKSTFVLDEFKRKYSNE 928
PKAKDPFAHLPKSTFVLDEFKRKYSNE
Sbjct: 241 KQKLQAEWKEEKKAAAPAPEEEMDECEQALAAEPKAKDPFAHLPKSTFVLDEFKRKYSNE 300
Query: 929 DTLSVALPYFWEHFDKDGWSLWYSEYRFPEELTQTFMSCNLITGMFQRLDKLRKNAFASV 1108
DTL VALPYFWEHFDKDGWSLWY+EYRFPEELTQTFMSCNLITGMFQRLDKLRKNAFASV
Sbjct: 301 DTLPVALPYFWEHFDKDGWSLWYAEYRFPEELTQTFMSCNLITGMFQRLDKLRKNAFASV 360
Query: 1109 ILFGTNNSSSISGVWVFRGQELAFPLSPDWQVDYESYTWRKLDPGSEETQTLVREYFSWE 1288
ILFGTNNSSSISGVWVFRGQELAFPLSPDWQVDYESYTWRKLDPGSEETQTLVRE FSWE
Sbjct: 361 ILFGTNNSSSISGVWVFRGQELAFPLSPDWQVDYESYTWRKLDPGSEETQTLVREDFSWE 420
Query: 1289 GAYQHVGKAFNQGKIFK 1339
GA+QHVGK FNQGKIFK
Sbjct: 421 GAFQHVGKTFNQGKIFK 437
Score = 530 bits (1366), Expect = e-150
Identities = 261/307 (85%), Positives = 276/307 (89%)
Frame = +3
Query: 1506 MAAGTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTNHTPEFLRKFPAGKVPA 1685
MAAGTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTN TPEFLRKFPAGKVPA
Sbjct: 1 MAAGTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTNRTPEFLRKFPAGKVPA 60
Query: 1686 FEGDDGFCVFESNAIAYYVSNEELRGSTPEAAAQVVQWVSFADSDIVPPASTWVFPTLGI 1865
FEGDDGFCVFES+AIAYYV+NEELRG+TPEAAAQVVQWVSFADSDIVPPASTWVFPTLGI
Sbjct: 61 FEGDDGFCVFESSAIAYYVNNEELRGNTPEAAAQVVQWVSFADSDIVPPASTWVFPTLGI 120
Query: 1866 MHYNKQATENAKDEVRRVLGLLDAHLKTRTFLVGERVTLADITVVCTLLWLYKQVLEPSF 2045
MH+NKQATENAK+EVRR+LGLLD HLKTRTFLVG+RVTLADITVVCTLLWLYKQVLEPSF
Sbjct: 121 MHHNKQATENAKEEVRRILGLLDTHLKTRTFLVGKRVTLADITVVCTLLWLYKQVLEPSF 180
Query: 2046 RQAFPNTNRWFLTCINQPQFRAVLXEVKLCEKMAQFDAKKFAESQPKKDTPRKEKGSREE 2225
RQAFPNTNRWFLTCINQPQFRAVL EVKLCEKMAQFDAKKFAESQPKKDTPRKEK SREE
Sbjct: 181 RQAFPNTNRWFLTCINQPQFRAVLGEVKLCEKMAQFDAKKFAESQPKKDTPRKEKDSREE 240
Query: 2226 EQKPQXXXXXXXXXXXXXXXXXLDKCNQAPAS*PQAKDPFAHLPKITFVLEKFNRNLLNK 2405
+QK Q +D+C QA A+ P+AKDPFAHLPK TFVL++F R N+
Sbjct: 241 KQKLQAEWKEEKKAAAPAPEEEMDECEQALAAEPKAKDPFAHLPKSTFVLDEFKRKYSNE 300
Query: 2406 DTLSVAL 2426
DTL VAL
Sbjct: 301 DTLPVAL 307
>ref|XP_849510.1| PREDICTED: similar to Elongation factor 1-gamma (EF-1-gamma) (eEF-1B
gamma) isoform 2 [Canis familiaris].
Length = 437
Score = 795 bits (2053), Expect = 0.0
Identities = 387/437 (88%), Positives = 396/437 (90%)
Frame = +2
Query: 29 MAAGTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTNHTPEFLRKFPAGKVPA 208
MAAGTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTN TPEFLRKFPAGKVPA
Sbjct: 1 MAAGTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTNRTPEFLRKFPAGKVPA 60
Query: 209 FEGDDGFCVFESNAIAYYVSNEELRGSTPEAAAQVVQWVSFADSDIVPPASTWVFPTLGI 388
FEGDDGFCVFES+AIAYYV+NEELRG+TPEAAAQVVQWVSFADSDIVPPASTWVFPTLGI
Sbjct: 61 FEGDDGFCVFESSAIAYYVNNEELRGNTPEAAAQVVQWVSFADSDIVPPASTWVFPTLGI 120
Query: 389 MHYNKQATENAKDEVRRVLGLLDAHLKTRTFLVGERVTLADITVVCTLLWLYKQVLEPSF 568
MH+NKQATENAK+EVRR+LGLLD HLKTRTFLVG+RVTLADITVVCTLLWLYKQVLEPSF
Sbjct: 121 MHHNKQATENAKEEVRRILGLLDTHLKTRTFLVGKRVTLADITVVCTLLWLYKQVLEPSF 180
Query: 569 RQAFPNTNRWFLTCINQPQFRAVLGEVKLCEKMAQFDAKKFAESQPKKDTPRKEKGSRXX 748
RQAFPNTNRWFLTCINQPQFRAVLGEVKLCEKMAQFDAKKFAESQPKKDTPRKEK SR
Sbjct: 181 RQAFPNTNRWFLTCINQPQFRAVLGEVKLCEKMAQFDAKKFAESQPKKDTPRKEKDSREE 240
Query: 749 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPKAKDPFAHLPKSTFVLDEFKRKYSNE 928
PKAKDPFAHLPKSTFVLDEFKRKYSNE
Sbjct: 241 KQKLQAEWKEEKKAAAPAPEEEMDECEQALAAEPKAKDPFAHLPKSTFVLDEFKRKYSNE 300
Query: 929 DTLSVALPYFWEHFDKDGWSLWYSEYRFPEELTQTFMSCNLITGMFQRLDKLRKNAFASV 1108
DTL VALPYFWEHFDKDGWSLWY+EYRFPEELTQTFMSCNLITGMFQRLDKLRKNAFASV
Sbjct: 301 DTLPVALPYFWEHFDKDGWSLWYAEYRFPEELTQTFMSCNLITGMFQRLDKLRKNAFASV 360
Query: 1109 ILFGTNNSSSISGVWVFRGQELAFPLSPDWQVDYESYTWRKLDPGSEETQTLVREYFSWE 1288
ILFGTNNSSSISGVWVFRGQELAFPLSPDWQVDYESYTWRKLDPGSEETQTLVRE FSWE
Sbjct: 361 ILFGTNNSSSISGVWVFRGQELAFPLSPDWQVDYESYTWRKLDPGSEETQTLVREDFSWE 420
Query: 1289 GAYQHVGKAFNQGKIFK 1339
GA+QHVGK FNQGKIFK
Sbjct: 421 GAFQHVGKTFNQGKIFK 437
Score = 530 bits (1366), Expect = e-150
Identities = 261/307 (85%), Positives = 276/307 (89%)
Frame = +3
Query: 1506 MAAGTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTNHTPEFLRKFPAGKVPA 1685
MAAGTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTN TPEFLRKFPAGKVPA
Sbjct: 1 MAAGTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTNRTPEFLRKFPAGKVPA 60
Query: 1686 FEGDDGFCVFESNAIAYYVSNEELRGSTPEAAAQVVQWVSFADSDIVPPASTWVFPTLGI 1865
FEGDDGFCVFES+AIAYYV+NEELRG+TPEAAAQVVQWVSFADSDIVPPASTWVFPTLGI
Sbjct: 61 FEGDDGFCVFESSAIAYYVNNEELRGNTPEAAAQVVQWVSFADSDIVPPASTWVFPTLGI 120
Query: 1866 MHYNKQATENAKDEVRRVLGLLDAHLKTRTFLVGERVTLADITVVCTLLWLYKQVLEPSF 2045
MH+NKQATENAK+EVRR+LGLLD HLKTRTFLVG+RVTLADITVVCTLLWLYKQVLEPSF
Sbjct: 121 MHHNKQATENAKEEVRRILGLLDTHLKTRTFLVGKRVTLADITVVCTLLWLYKQVLEPSF 180
Query: 2046 RQAFPNTNRWFLTCINQPQFRAVLXEVKLCEKMAQFDAKKFAESQPKKDTPRKEKGSREE 2225
RQAFPNTNRWFLTCINQPQFRAVL EVKLCEKMAQFDAKKFAESQPKKDTPRKEK SREE
Sbjct: 181 RQAFPNTNRWFLTCINQPQFRAVLGEVKLCEKMAQFDAKKFAESQPKKDTPRKEKDSREE 240
Query: 2226 EQKPQXXXXXXXXXXXXXXXXXLDKCNQAPAS*PQAKDPFAHLPKITFVLEKFNRNLLNK 2405
+QK Q +D+C QA A+ P+AKDPFAHLPK TFVL++F R N+
Sbjct: 241 KQKLQAEWKEEKKAAAPAPEEEMDECEQALAAEPKAKDPFAHLPKSTFVLDEFKRKYSNE 300
Query: 2406 DTLSVAL 2426
DTL VAL
Sbjct: 301 DTLPVAL 307
>ref|XP_861367.1| PREDICTED: similar to Elongation factor 1-gamma (EF-1-gamma) (eEF-1B
gamma) isoform 12 [Canis familiaris].
Length = 437
Score = 788 bits (2034), Expect = 0.0
Identities = 386/437 (88%), Positives = 393/437 (89%)
Frame = +2
Query: 29 MAAGTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTNHTPEFLRKFPAGKVPA 208
MAAGTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTN TPEFLRKFPAGKVPA
Sbjct: 1 MAAGTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTNRTPEFLRKFPAGKVPA 60
Query: 209 FEGDDGFCVFESNAIAYYVSNEELRGSTPEAAAQVVQWVSFADSDIVPPASTWVFPTLGI 388
FEGDDGFCVFESNAIAYYVSNEELRG+TPEAAAQVVQWVSFADSDIVPPASTWVFPTLGI
Sbjct: 61 FEGDDGFCVFESNAIAYYVSNEELRGNTPEAAAQVVQWVSFADSDIVPPASTWVFPTLGI 120
Query: 389 MHYNKQATENAKDEVRRVLGLLDAHLKTRTFLVGERVTLADITVVCTLLWLYKQVLEPSF 568
MH+NKQATENAK+EVRR+LGLLD HLKTRTFLVGERVTLADITVVCTLLWLYKQVLEPSF
Sbjct: 121 MHHNKQATENAKEEVRRILGLLDTHLKTRTFLVGERVTLADITVVCTLLWLYKQVLEPSF 180
Query: 569 RQAFPNTNRWFLTCINQPQFRAVLGEVKLCEKMAQFDAKKFAESQPKKDTPRKEKGSRXX 748
RQAFPNTNRWFLTCINQPQFRAVLGEVKLCEKMAQFDAKKFAESQPKKDTPRKEKGSR
Sbjct: 181 RQAFPNTNRWFLTCINQPQFRAVLGEVKLCEKMAQFDAKKFAESQPKKDTPRKEKGSREE 240
Query: 749 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPKAKDPFAHLPKSTFVLDEFKRKYSNE 928
PKAKDPFAHLPKSTFVLDEFKRKYSNE
Sbjct: 241 KQKPQAERKEEKKAAAPAPEEEMDECEQALAAEPKAKDPFAHLPKSTFVLDEFKRKYSNE 300
Query: 929 DTLSVALPYFWEHFDKDGWSLWYSEYRFPEELTQTFMSCNLITGMFQRLDKLRKNAFASV 1108
DTL+VALPYFWEHFDKDGWSLWY+EYRFPEELTQTFMSCNLITGMFQRLDKLRKNAFASV
Sbjct: 301 DTLTVALPYFWEHFDKDGWSLWYAEYRFPEELTQTFMSCNLITGMFQRLDKLRKNAFASV 360
Query: 1109 ILFGTNNSSSISGVWVFRGQELAFPLSPDWQVDYESYTWRKLDPGSEETQTLVREYFSWE 1288
ILFGTNNSSSISGVWVFRGQELAFPLSPDWQVDYESYTWRKLDPGSEETQTLVREYF
Sbjct: 361 ILFGTNNSSSISGVWVFRGQELAFPLSPDWQVDYESYTWRKLDPGSEETQTLVREYFRPS 420
Query: 1289 GAYQHVGKAFNQGKIFK 1339
G +VGK FNQGKIFK
Sbjct: 421 GPGGNVGKTFNQGKIFK 437
Score = 542 bits (1397), Expect = e-154
Identities = 266/307 (86%), Positives = 279/307 (90%)
Frame = +3
Query: 1506 MAAGTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTNHTPEFLRKFPAGKVPA 1685
MAAGTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTN TPEFLRKFPAGKVPA
Sbjct: 1 MAAGTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTNRTPEFLRKFPAGKVPA 60
Query: 1686 FEGDDGFCVFESNAIAYYVSNEELRGSTPEAAAQVVQWVSFADSDIVPPASTWVFPTLGI 1865
FEGDDGFCVFESNAIAYYVSNEELRG+TPEAAAQVVQWVSFADSDIVPPASTWVFPTLGI
Sbjct: 61 FEGDDGFCVFESNAIAYYVSNEELRGNTPEAAAQVVQWVSFADSDIVPPASTWVFPTLGI 120
Query: 1866 MHYNKQATENAKDEVRRVLGLLDAHLKTRTFLVGERVTLADITVVCTLLWLYKQVLEPSF 2045
MH+NKQATENAK+EVRR+LGLLD HLKTRTFLVGERVTLADITVVCTLLWLYKQVLEPSF
Sbjct: 121 MHHNKQATENAKEEVRRILGLLDTHLKTRTFLVGERVTLADITVVCTLLWLYKQVLEPSF 180
Query: 2046 RQAFPNTNRWFLTCINQPQFRAVLXEVKLCEKMAQFDAKKFAESQPKKDTPRKEKGSREE 2225
RQAFPNTNRWFLTCINQPQFRAVL EVKLCEKMAQFDAKKFAESQPKKDTPRKEKGSREE
Sbjct: 181 RQAFPNTNRWFLTCINQPQFRAVLGEVKLCEKMAQFDAKKFAESQPKKDTPRKEKGSREE 240
Query: 2226 EQKPQXXXXXXXXXXXXXXXXXLDKCNQAPAS*PQAKDPFAHLPKITFVLEKFNRNLLNK 2405
+QKPQ +D+C QA A+ P+AKDPFAHLPK TFVL++F R N+
Sbjct: 241 KQKPQAERKEEKKAAAPAPEEEMDECEQALAAEPKAKDPFAHLPKSTFVLDEFKRKYSNE 300
Query: 2406 DTLSVAL 2426
DTL+VAL
Sbjct: 301 DTLTVAL 307
>ref|XP_850257.1| PREDICTED: similar to Elongation factor 1-gamma (EF-1-gamma) (eEF-1B
gamma) isoform 1 [Canis familiaris].
Length = 437
Score = 788 bits (2034), Expect = 0.0
Identities = 386/437 (88%), Positives = 393/437 (89%)
Frame = +2
Query: 29 MAAGTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTNHTPEFLRKFPAGKVPA 208
MAAGTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTN TPEFLRKFPAGKVPA
Sbjct: 1 MAAGTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTNRTPEFLRKFPAGKVPA 60
Query: 209 FEGDDGFCVFESNAIAYYVSNEELRGSTPEAAAQVVQWVSFADSDIVPPASTWVFPTLGI 388
FEGDDGFCVFESNAIAYYVSNEELRG+TPEAAAQVVQWVSFADSDIVPPASTWVFPTLGI
Sbjct: 61 FEGDDGFCVFESNAIAYYVSNEELRGNTPEAAAQVVQWVSFADSDIVPPASTWVFPTLGI 120
Query: 389 MHYNKQATENAKDEVRRVLGLLDAHLKTRTFLVGERVTLADITVVCTLLWLYKQVLEPSF 568
MH+NKQATENAK+EVRR+LGLLD HLKTRTFLVGERVTLADITVVCTLLWLYKQVLEPSF
Sbjct: 121 MHHNKQATENAKEEVRRILGLLDTHLKTRTFLVGERVTLADITVVCTLLWLYKQVLEPSF 180
Query: 569 RQAFPNTNRWFLTCINQPQFRAVLGEVKLCEKMAQFDAKKFAESQPKKDTPRKEKGSRXX 748
RQAFPNTNRWFLTCINQPQFRAVLGEVKLCEKMAQFDAKKFAESQPKKDTPRKEKGSR
Sbjct: 181 RQAFPNTNRWFLTCINQPQFRAVLGEVKLCEKMAQFDAKKFAESQPKKDTPRKEKGSREE 240
Query: 749 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPKAKDPFAHLPKSTFVLDEFKRKYSNE 928
PKAKDPFAHLPKSTFVLDEFKRKYSNE
Sbjct: 241 KQKPQAERKEEKKAAAPAPEEEMDECEQALAAEPKAKDPFAHLPKSTFVLDEFKRKYSNE 300
Query: 929 DTLSVALPYFWEHFDKDGWSLWYSEYRFPEELTQTFMSCNLITGMFQRLDKLRKNAFASV 1108
DTL+VALPYFWEHFDKDGWSLWY+EYRFPEELTQTFMSCNLITGMFQRLDKLRKNAFASV
Sbjct: 301 DTLTVALPYFWEHFDKDGWSLWYAEYRFPEELTQTFMSCNLITGMFQRLDKLRKNAFASV 360
Query: 1109 ILFGTNNSSSISGVWVFRGQELAFPLSPDWQVDYESYTWRKLDPGSEETQTLVREYFSWE 1288
ILFGTNNSSSISGVWVFRGQELAFPLSPDWQVDYESYTWRKLDPGSEETQTLVREYF
Sbjct: 361 ILFGTNNSSSISGVWVFRGQELAFPLSPDWQVDYESYTWRKLDPGSEETQTLVREYFRPS 420
Query: 1289 GAYQHVGKAFNQGKIFK 1339
G +VGK FNQGKIFK
Sbjct: 421 GPGGNVGKTFNQGKIFK 437
Score = 542 bits (1397), Expect = e-154
Identities = 266/307 (86%), Positives = 279/307 (90%)
Frame = +3
Query: 1506 MAAGTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTNHTPEFLRKFPAGKVPA 1685
MAAGTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTN TPEFLRKFPAGKVPA
Sbjct: 1 MAAGTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTNRTPEFLRKFPAGKVPA 60
Query: 1686 FEGDDGFCVFESNAIAYYVSNEELRGSTPEAAAQVVQWVSFADSDIVPPASTWVFPTLGI 1865
FEGDDGFCVFESNAIAYYVSNEELRG+TPEAAAQVVQWVSFADSDIVPPASTWVFPTLGI
Sbjct: 61 FEGDDGFCVFESNAIAYYVSNEELRGNTPEAAAQVVQWVSFADSDIVPPASTWVFPTLGI 120
Query: 1866 MHYNKQATENAKDEVRRVLGLLDAHLKTRTFLVGERVTLADITVVCTLLWLYKQVLEPSF 2045
MH+NKQATENAK+EVRR+LGLLD HLKTRTFLVGERVTLADITVVCTLLWLYKQVLEPSF
Sbjct: 121 MHHNKQATENAKEEVRRILGLLDTHLKTRTFLVGERVTLADITVVCTLLWLYKQVLEPSF 180
Query: 2046 RQAFPNTNRWFLTCINQPQFRAVLXEVKLCEKMAQFDAKKFAESQPKKDTPRKEKGSREE 2225
RQAFPNTNRWFLTCINQPQFRAVL EVKLCEKMAQFDAKKFAESQPKKDTPRKEKGSREE
Sbjct: 181 RQAFPNTNRWFLTCINQPQFRAVLGEVKLCEKMAQFDAKKFAESQPKKDTPRKEKGSREE 240
Query: 2226 EQKPQXXXXXXXXXXXXXXXXXLDKCNQAPAS*PQAKDPFAHLPKITFVLEKFNRNLLNK 2405
+QKPQ +D+C QA A+ P+AKDPFAHLPK TFVL++F R N+
Sbjct: 241 KQKPQAERKEEKKAAAPAPEEEMDECEQALAAEPKAKDPFAHLPKSTFVLDEFKRKYSNE 300
Query: 2406 DTLSVAL 2426
DTL+VAL
Sbjct: 301 DTLTVAL 307
>ref|XP_856191.1| PREDICTED: similar to Elongation factor 1-gamma (EF-1-gamma) (eEF-1B
gamma) isoform 14 [Canis familiaris].
Length = 430
Score = 771 bits (1990), Expect = 0.0
Identities = 378/443 (85%), Positives = 388/443 (87%)
Frame = +2
Query: 11 FLCGITMAAGTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTNHTPEFLRKFP 190
FLCGIT AAG LYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTN TPEFLRKFP
Sbjct: 4 FLCGITTAAGPLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTNRTPEFLRKFP 63
Query: 191 AGKVPAFEGDDGFCVFESNAIAYYVSNEELRGSTPEAAAQVVQWVSFADSDIVPPASTWV 370
AGKVPAFEGDDGFCVFESNAIAYYVSNEELRG+TPEAAAQVVQWVSFADSDIVPPASTWV
Sbjct: 64 AGKVPAFEGDDGFCVFESNAIAYYVSNEELRGNTPEAAAQVVQWVSFADSDIVPPASTWV 123
Query: 371 FPTLGIMHYNKQATENAKDEVRRVLGLLDAHLKTRTFLVGERVTLADITVVCTLLWLYKQ 550
PTLGIMH+NKQATENAK+EVRR+LGLLD HLKTRTFLVGERVTLADITVVCTLLWLYKQ
Sbjct: 124 LPTLGIMHHNKQATENAKEEVRRILGLLDTHLKTRTFLVGERVTLADITVVCTLLWLYKQ 183
Query: 551 VLEPSFRQAFPNTNRWFLTCINQPQFRAVLGEVKLCEKMAQFDAKKFAESQPKKDTPRKE 730
VLEPSFRQAFPNTNRWFLTCINQPQF AVLGEVKLCEKM QFDAKKFAE + K RKE
Sbjct: 184 VLEPSFRQAFPNTNRWFLTCINQPQFWAVLGEVKLCEKMVQFDAKKFAEKKQKPQAERKE 243
Query: 731 KGSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPKAKDPFAHLPKSTFVLDEFK 910
+ PKAKDPFAH PKSTFVLDEFK
Sbjct: 244 E----------------KKAAAPAPEEEMDACEQALAAEPKAKDPFAHPPKSTFVLDEFK 287
Query: 911 RKYSNEDTLSVALPYFWEHFDKDGWSLWYSEYRFPEELTQTFMSCNLITGMFQRLDKLRK 1090
RKYSNEDTL+VALPYFWEHFDKDGWSLWY+EY FPEELTQTFMSCNLITGMFQ+LDKLRK
Sbjct: 288 RKYSNEDTLTVALPYFWEHFDKDGWSLWYAEYCFPEELTQTFMSCNLITGMFQQLDKLRK 347
Query: 1091 NAFASVILFGTNNSSSISGVWVFRGQELAFPLSPDWQVDYESYTWRKLDPGSEETQTLVR 1270
NAFASVILFGTNNSSSISGVWVFRGQELAFPLSPDWQVDYESYTWRKLDPGSEE QTLVR
Sbjct: 348 NAFASVILFGTNNSSSISGVWVFRGQELAFPLSPDWQVDYESYTWRKLDPGSEENQTLVR 407
Query: 1271 EYFSWEGAYQHVGKAFNQGKIFK 1339
EYFSWEGA+QHVGK FNQGKIFK
Sbjct: 408 EYFSWEGAFQHVGKTFNQGKIFK 430
Score = 498 bits (1282), Expect = e-140
Identities = 253/313 (80%), Positives = 267/313 (85%)
Frame = +3
Query: 1488 FLCGITMAAGTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTNHTPEFLRKFP 1667
FLCGIT AAG LYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTN TPEFLRKFP
Sbjct: 4 FLCGITTAAGPLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTNRTPEFLRKFP 63
Query: 1668 AGKVPAFEGDDGFCVFESNAIAYYVSNEELRGSTPEAAAQVVQWVSFADSDIVPPASTWV 1847
AGKVPAFEGDDGFCVFESNAIAYYVSNEELRG+TPEAAAQVVQWVSFADSDIVPPASTWV
Sbjct: 64 AGKVPAFEGDDGFCVFESNAIAYYVSNEELRGNTPEAAAQVVQWVSFADSDIVPPASTWV 123
Query: 1848 FPTLGIMHYNKQATENAKDEVRRVLGLLDAHLKTRTFLVGERVTLADITVVCTLLWLYKQ 2027
PTLGIMH+NKQATENAK+EVRR+LGLLD HLKTRTFLVGERVTLADITVVCTLLWLYKQ
Sbjct: 124 LPTLGIMHHNKQATENAKEEVRRILGLLDTHLKTRTFLVGERVTLADITVVCTLLWLYKQ 183
Query: 2028 VLEPSFRQAFPNTNRWFLTCINQPQFRAVLXEVKLCEKMAQFDAKKFAESQPKKDTPRKE 2207
VLEPSFRQAFPNTNRWFLTCINQPQF AVL EVKLCEKM QFDAKKFAE KK P+ E
Sbjct: 184 VLEPSFRQAFPNTNRWFLTCINQPQFWAVLGEVKLCEKMVQFDAKKFAE---KKQKPQAE 240
Query: 2208 KGSREEEQKPQXXXXXXXXXXXXXXXXXLDKCNQAPAS*PQAKDPFAHLPKITFVLEKFN 2387
R+EE+K +D C QA A+ P+AKDPFAH PK TFVL++F
Sbjct: 241 ---RKEEKK----------AAAPAPEEEMDACEQALAAEPKAKDPFAHPPKSTFVLDEFK 287
Query: 2388 RNLLNKDTLSVAL 2426
R N+DTL+VAL
Sbjct: 288 RKYSNEDTLTVAL 300
>ref|XP_848460.1| PREDICTED: similar to Elongation factor 1-gamma (EF-1-gamma) (eEF-1B
gamma) isoform 3 [Canis familiaris].
Length = 433
Score = 768 bits (1983), Expect = 0.0
Identities = 376/443 (84%), Positives = 388/443 (87%)
Frame = +2
Query: 11 FLCGITMAAGTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTNHTPEFLRKFP 190
FLCGIT AAG LYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTN TPEFLRKFP
Sbjct: 4 FLCGITTAAGPLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTNRTPEFLRKFP 63
Query: 191 AGKVPAFEGDDGFCVFESNAIAYYVSNEELRGSTPEAAAQVVQWVSFADSDIVPPASTWV 370
AGKVPAFEGDDGFCVFESNAIAYYVSNEELRG+TPEAAAQVVQWVSFADSDIVPPASTWV
Sbjct: 64 AGKVPAFEGDDGFCVFESNAIAYYVSNEELRGNTPEAAAQVVQWVSFADSDIVPPASTWV 123
Query: 371 FPTLGIMHYNKQATENAKDEVRRVLGLLDAHLKTRTFLVGERVTLADITVVCTLLWLYKQ 550
PTLGIMH+NKQATENAK+EVRR+LGLLD HLKTRTFLVGERVTLADITVVCTLLWLYKQ
Sbjct: 124 LPTLGIMHHNKQATENAKEEVRRILGLLDTHLKTRTFLVGERVTLADITVVCTLLWLYKQ 183
Query: 551 VLEPSFRQAFPNTNRWFLTCINQPQFRAVLGEVKLCEKMAQFDAKKFAESQPKKDTPRKE 730
VLEPSFRQAFPNTNRWFLTCINQPQF AVLGEVKLCEKM QFDAKKF S+ +K P+ E
Sbjct: 184 VLEPSFRQAFPNTNRWFLTCINQPQFWAVLGEVKLCEKMVQFDAKKFKGSREEKQKPQAE 243
Query: 731 KGSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPKAKDPFAHLPKSTFVLDEFK 910
+ PKAKDPFAH PKSTFVLDEFK
Sbjct: 244 RKEEKKAAAPAPEEEMDACEQALAAE-------------PKAKDPFAHPPKSTFVLDEFK 290
Query: 911 RKYSNEDTLSVALPYFWEHFDKDGWSLWYSEYRFPEELTQTFMSCNLITGMFQRLDKLRK 1090
RKYSNEDTL+VALPYFWEHFDKDGWSLWY+EY FPEELTQTFMSCNLITGMFQ+LDKLRK
Sbjct: 291 RKYSNEDTLTVALPYFWEHFDKDGWSLWYAEYCFPEELTQTFMSCNLITGMFQQLDKLRK 350
Query: 1091 NAFASVILFGTNNSSSISGVWVFRGQELAFPLSPDWQVDYESYTWRKLDPGSEETQTLVR 1270
NAFASVILFGTNNSSSISGVWVFRGQELAFPLSPDWQVDYESYTWRKLDPGSEE QTLVR
Sbjct: 351 NAFASVILFGTNNSSSISGVWVFRGQELAFPLSPDWQVDYESYTWRKLDPGSEENQTLVR 410
Query: 1271 EYFSWEGAYQHVGKAFNQGKIFK 1339
EYFSWEGA+QHVGK FNQGKIFK
Sbjct: 411 EYFSWEGAFQHVGKTFNQGKIFK 433
Score = 505 bits (1300), Expect = e-143
Identities = 253/313 (80%), Positives = 265/313 (84%)
Frame = +3
Query: 1488 FLCGITMAAGTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTNHTPEFLRKFP 1667
FLCGIT AAG LYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTN TPEFLRKFP
Sbjct: 4 FLCGITTAAGPLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTNRTPEFLRKFP 63
Query: 1668 AGKVPAFEGDDGFCVFESNAIAYYVSNEELRGSTPEAAAQVVQWVSFADSDIVPPASTWV 1847
AGKVPAFEGDDGFCVFESNAIAYYVSNEELRG+TPEAAAQVVQWVSFADSDIVPPASTWV
Sbjct: 64 AGKVPAFEGDDGFCVFESNAIAYYVSNEELRGNTPEAAAQVVQWVSFADSDIVPPASTWV 123
Query: 1848 FPTLGIMHYNKQATENAKDEVRRVLGLLDAHLKTRTFLVGERVTLADITVVCTLLWLYKQ 2027
PTLGIMH+NKQATENAK+EVRR+LGLLD HLKTRTFLVGERVTLADITVVCTLLWLYKQ
Sbjct: 124 LPTLGIMHHNKQATENAKEEVRRILGLLDTHLKTRTFLVGERVTLADITVVCTLLWLYKQ 183
Query: 2028 VLEPSFRQAFPNTNRWFLTCINQPQFRAVLXEVKLCEKMAQFDAKKFAESQPKKDTPRKE 2207
VLEPSFRQAFPNTNRWFLTCINQPQF AVL EVKLCEKM QFDAKKF
Sbjct: 184 VLEPSFRQAFPNTNRWFLTCINQPQFWAVLGEVKLCEKMVQFDAKKF------------- 230
Query: 2208 KGSREEEQKPQXXXXXXXXXXXXXXXXXLDKCNQAPAS*PQAKDPFAHLPKITFVLEKFN 2387
KGSREE+QKPQ +D C QA A+ P+AKDPFAH PK TFVL++F
Sbjct: 231 KGSREEKQKPQAERKEEKKAAAPAPEEEMDACEQALAAEPKAKDPFAHPPKSTFVLDEFK 290
Query: 2388 RNLLNKDTLSVAL 2426
R N+DTL+VAL
Sbjct: 291 RKYSNEDTLTVAL 303
>ref|XP_867777.1| PREDICTED: similar to Elongation factor 1-gamma (EF-1-gamma) (eEF-1B
gamma) isoform 22 [Canis familiaris].
Length = 405
Score = 763 bits (1971), Expect = 0.0
Identities = 376/438 (85%), Positives = 387/438 (88%), Gaps = 1/438 (0%)
Frame = +2
Query: 29 MAAGTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTNHTPEFLRKFPAGKVPA 208
MAAGTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTN TPEFLRKFPAGKVPA
Sbjct: 1 MAAGTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTNRTPEFLRKFPAGKVPA 60
Query: 209 FEGDDGFCVFESNAIAYYVSNEELRGSTPEAAAQVVQWVSFADSDIVPPASTWVFPTLGI 388
FEGDDGFCVFESNAIAYYVSNEELRG+TPEAAAQVVQWVSFADSDIVPPASTWVFPTLGI
Sbjct: 61 FEGDDGFCVFESNAIAYYVSNEELRGNTPEAAAQVVQWVSFADSDIVPPASTWVFPTLGI 120
Query: 389 MHYNKQATENAKDEVRRVLGLLDAHLKTRTFLVGERVTLADITVVCTLLWLYKQVLEPSF 568
MH+NKQATENAK+EVRR+LGLLD HLKTRTFLVGERVTLADITVVCTLLWLYKQVLEPSF
Sbjct: 121 MHHNKQATENAKEEVRRILGLLDTHLKTRTFLVGERVTLADITVVCTLLWLYKQVLEPSF 180
Query: 569 RQAFPNTNRWFLTCINQPQFRAVLGEVKLCEKMAQFD-AKKFAESQPKKDTPRKEKGSRX 745
RQAFPNTNRWFLTCINQPQFRAVLGEVKLCEKMAQFD KK A P+++ E+
Sbjct: 181 RQAFPNTNRWFLTCINQPQFRAVLGEVKLCEKMAQFDEEKKAAAPAPEEEMDECEQA--- 237
Query: 746 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPKAKDPFAHLPKSTFVLDEFKRKYSN 925
PKAKDPFAHLPKSTFVLDEFKRKYSN
Sbjct: 238 ------------------------------LAAEPKAKDPFAHLPKSTFVLDEFKRKYSN 267
Query: 926 EDTLSVALPYFWEHFDKDGWSLWYSEYRFPEELTQTFMSCNLITGMFQRLDKLRKNAFAS 1105
EDTL+VALPYFWEHFDKDGWSLWY+EYRFPEELTQTFMSCNLITGMFQRLDKLRKNAFAS
Sbjct: 268 EDTLTVALPYFWEHFDKDGWSLWYAEYRFPEELTQTFMSCNLITGMFQRLDKLRKNAFAS 327
Query: 1106 VILFGTNNSSSISGVWVFRGQELAFPLSPDWQVDYESYTWRKLDPGSEETQTLVREYFSW 1285
VILFGTNNSSSISGVWVFRGQELAFPLSPDWQVDYESYTWRKLDPGSEETQTLVREYFSW
Sbjct: 328 VILFGTNNSSSISGVWVFRGQELAFPLSPDWQVDYESYTWRKLDPGSEETQTLVREYFSW 387
Query: 1286 EGAYQHVGKAFNQGKIFK 1339
EGA+QHVGK FNQGKIFK
Sbjct: 388 EGAFQHVGKTFNQGKIFK 405
Score = 481 bits (1238), Expect = e-135
Identities = 244/307 (79%), Positives = 259/307 (84%)
Frame = +3
Query: 1506 MAAGTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTNHTPEFLRKFPAGKVPA 1685
MAAGTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTN TPEFLRKFPAGKVPA
Sbjct: 1 MAAGTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTNRTPEFLRKFPAGKVPA 60
Query: 1686 FEGDDGFCVFESNAIAYYVSNEELRGSTPEAAAQVVQWVSFADSDIVPPASTWVFPTLGI 1865
FEGDDGFCVFESNAIAYYVSNEELRG+TPEAAAQVVQWVSFADSDIVPPASTWVFPTLGI
Sbjct: 61 FEGDDGFCVFESNAIAYYVSNEELRGNTPEAAAQVVQWVSFADSDIVPPASTWVFPTLGI 120
Query: 1866 MHYNKQATENAKDEVRRVLGLLDAHLKTRTFLVGERVTLADITVVCTLLWLYKQVLEPSF 2045
MH+NKQATENAK+EVRR+LGLLD HLKTRTFLVGERVTLADITVVCTLLWLYKQVLEPSF
Sbjct: 121 MHHNKQATENAKEEVRRILGLLDTHLKTRTFLVGERVTLADITVVCTLLWLYKQVLEPSF 180
Query: 2046 RQAFPNTNRWFLTCINQPQFRAVLXEVKLCEKMAQFDAKKFAESQPKKDTPRKEKGSREE 2225
RQAFPNTNRWFLTCINQPQFRAVL EVKLCEKMAQFD +K A + + EE
Sbjct: 181 RQAFPNTNRWFLTCINQPQFRAVLGEVKLCEKMAQFDEEKKAAAP-----------APEE 229
Query: 2226 EQKPQXXXXXXXXXXXXXXXXXLDKCNQAPAS*PQAKDPFAHLPKITFVLEKFNRNLLNK 2405
E +D+C QA A+ P+AKDPFAHLPK TFVL++F R N+
Sbjct: 230 E---------------------MDECEQALAAEPKAKDPFAHLPKSTFVLDEFKRKYSNE 268
Query: 2406 DTLSVAL 2426
DTL+VAL
Sbjct: 269 DTLTVAL 275
>ref|XP_867742.1| PREDICTED: similar to Elongation factor 1-gamma (EF-1-gamma) (eEF-1B
gamma) isoform 18 [Canis familiaris].
Length = 409
Score = 735 bits (1898), Expect = 0.0
Identities = 365/437 (83%), Positives = 371/437 (84%)
Frame = +2
Query: 29 MAAGTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTNHTPEFLRKFPAGKVPA 208
MAAGTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTN TPEFLRKFPAGKVPA
Sbjct: 1 MAAGTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTNRTPEFLRKFPAGKVPA 60
Query: 209 FEGDDGFCVFESNAIAYYVSNEELRGSTPEAAAQVVQWVSFADSDIVPPASTWVFPTLGI 388
FEGDDGFCVFESNAIAYYVSNEELRG+TPEAAAQVVQW
Sbjct: 61 FEGDDGFCVFESNAIAYYVSNEELRGNTPEAAAQVVQW---------------------- 98
Query: 389 MHYNKQATENAKDEVRRVLGLLDAHLKTRTFLVGERVTLADITVVCTLLWLYKQVLEPSF 568
ATENAK+EVRR+LGLLD HLKTRTFLVGERVTLADITVVCTLLWLYKQVLEPSF
Sbjct: 99 ------ATENAKEEVRRILGLLDTHLKTRTFLVGERVTLADITVVCTLLWLYKQVLEPSF 152
Query: 569 RQAFPNTNRWFLTCINQPQFRAVLGEVKLCEKMAQFDAKKFAESQPKKDTPRKEKGSRXX 748
RQAFPNTNRWFLTCINQPQFRAVLGEVKLCEKMAQFDAKKFAESQPKKDTPRKEKGSR
Sbjct: 153 RQAFPNTNRWFLTCINQPQFRAVLGEVKLCEKMAQFDAKKFAESQPKKDTPRKEKGSREE 212
Query: 749 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPKAKDPFAHLPKSTFVLDEFKRKYSNE 928
PKAKDPFAHLPKSTFVLDEFKRKYSNE
Sbjct: 213 KQKPQAERKEEKKAAAPAPEEEMDECEQALAAEPKAKDPFAHLPKSTFVLDEFKRKYSNE 272
Query: 929 DTLSVALPYFWEHFDKDGWSLWYSEYRFPEELTQTFMSCNLITGMFQRLDKLRKNAFASV 1108
DTL+VALPYFWEHFDKDGWSLWY+EYRFPEELTQTFMSCNLITGMFQRLDKLRKNAFASV
Sbjct: 273 DTLTVALPYFWEHFDKDGWSLWYAEYRFPEELTQTFMSCNLITGMFQRLDKLRKNAFASV 332
Query: 1109 ILFGTNNSSSISGVWVFRGQELAFPLSPDWQVDYESYTWRKLDPGSEETQTLVREYFSWE 1288
ILFGTNNSSSISGVWVFRGQELAFPLSPDWQVDYESYTWRKLDPGSEETQTLVREYFSWE
Sbjct: 333 ILFGTNNSSSISGVWVFRGQELAFPLSPDWQVDYESYTWRKLDPGSEETQTLVREYFSWE 392
Query: 1289 GAYQHVGKAFNQGKIFK 1339
GA+QHVGK FNQGKIFK
Sbjct: 393 GAFQHVGKTFNQGKIFK 409
Score = 471 bits (1211), Expect = e-132
Identities = 239/307 (77%), Positives = 251/307 (81%)
Frame = +3
Query: 1506 MAAGTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTNHTPEFLRKFPAGKVPA 1685
MAAGTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTN TPEFLRKFPAGKVPA
Sbjct: 1 MAAGTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTNRTPEFLRKFPAGKVPA 60
Query: 1686 FEGDDGFCVFESNAIAYYVSNEELRGSTPEAAAQVVQWVSFADSDIVPPASTWVFPTLGI 1865
FEGDDGFCVFESNAIAYYVSNEELRG+TPEAAAQVVQW
Sbjct: 61 FEGDDGFCVFESNAIAYYVSNEELRGNTPEAAAQVVQW---------------------- 98
Query: 1866 MHYNKQATENAKDEVRRVLGLLDAHLKTRTFLVGERVTLADITVVCTLLWLYKQVLEPSF 2045
ATENAK+EVRR+LGLLD HLKTRTFLVGERVTLADITVVCTLLWLYKQVLEPSF
Sbjct: 99 ------ATENAKEEVRRILGLLDTHLKTRTFLVGERVTLADITVVCTLLWLYKQVLEPSF 152
Query: 2046 RQAFPNTNRWFLTCINQPQFRAVLXEVKLCEKMAQFDAKKFAESQPKKDTPRKEKGSREE 2225
RQAFPNTNRWFLTCINQPQFRAVL EVKLCEKMAQFDAKKFAESQPKKDTPRKEKGSREE
Sbjct: 153 RQAFPNTNRWFLTCINQPQFRAVLGEVKLCEKMAQFDAKKFAESQPKKDTPRKEKGSREE 212
Query: 2226 EQKPQXXXXXXXXXXXXXXXXXLDKCNQAPAS*PQAKDPFAHLPKITFVLEKFNRNLLNK 2405
+QKPQ +D+C QA A+ P+AKDPFAHLPK TFVL++F R N+
Sbjct: 213 KQKPQAERKEEKKAAAPAPEEEMDECEQALAAEPKAKDPFAHLPKSTFVLDEFKRKYSNE 272
Query: 2406 DTLSVAL 2426
DTL+VAL
Sbjct: 273 DTLTVAL 279
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 99,568,397
Number of extensions: 2811423
Number of successful extensions: 12024
Number of sequences better than 1.0e-05: 113
Number of HSP's gapped: 11851
Number of HSP's successfully gapped: 301
Length of query: 809
Length of database: 18,874,504
Length adjustment: 111
Effective length of query: 698
Effective length of database: 15,174,208
Effective search space: 10591597184
Effective search space used: 10591597184
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-001666
(2428 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001395.1| elongation factor 1-gamma [Homo sapiens]. 810 0.0
Alignment gi|NP_006286.1| valyl-tRNA synthetase [Homo sapiens]. 120 8e-27
>ref|NP_001395.1| elongation factor 1-gamma [Homo sapiens].
Length = 437
Score = 810 bits (2092), Expect = 0.0
Identities = 395/437 (90%), Positives = 401/437 (91%)
Frame = +2
Query: 29 MAAGTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTNHTPEFLRKFPAGKVPA 208
MAAGTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTN TPEFLRKFPAGKVPA
Sbjct: 1 MAAGTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTNRTPEFLRKFPAGKVPA 60
Query: 209 FEGDDGFCVFESNAIAYYVSNEELRGSTPEAAAQVVQWVSFADSDIVPPASTWVFPTLGI 388
FEGDDGFCVFESNAIAYYVSNEELRGSTPEAAAQVVQWVSFADSDIVPPASTWVFPTLGI
Sbjct: 61 FEGDDGFCVFESNAIAYYVSNEELRGSTPEAAAQVVQWVSFADSDIVPPASTWVFPTLGI 120
Query: 389 MHYNKQATENAKDEVRRVLGLLDAHLKTRTFLVGERVTLADITVVCTLLWLYKQVLEPSF 568
MH+NKQATENAK+EVRR+LGLLDA+LKTRTFLVGERVTLADITVVCTLLWLYKQVLEPSF
Sbjct: 121 MHHNKQATENAKEEVRRILGLLDAYLKTRTFLVGERVTLADITVVCTLLWLYKQVLEPSF 180
Query: 569 RQAFPNTNRWFLTCINQPQFRAVLGEVKLCEKMAQFDAKKFAESQPKKDTPRKEKGSRXX 748
RQAFPNTNRWFLTCINQPQFRAVLGEVKLCEKMAQFDAKKFAE+QPKKDTPRKEKGSR
Sbjct: 181 RQAFPNTNRWFLTCINQPQFRAVLGEVKLCEKMAQFDAKKFAETQPKKDTPRKEKGSREE 240
Query: 749 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPKAKDPFAHLPKSTFVLDEFKRKYSNE 928
PKAKDPFAHLPKSTFVLDEFKRKYSNE
Sbjct: 241 KQKPQAERKEEKKAAAPAPEEEMDECEQALAAEPKAKDPFAHLPKSTFVLDEFKRKYSNE 300
Query: 929 DTLSVALPYFWEHFDKDGWSLWYSEYRFPEELTQTFMSCNLITGMFQRLDKLRKNAFASV 1108
DTLSVALPYFWEHFDKDGWSLWYSEYRFPEELTQTFMSCNLITGMFQRLDKLRKNAFASV
Sbjct: 301 DTLSVALPYFWEHFDKDGWSLWYSEYRFPEELTQTFMSCNLITGMFQRLDKLRKNAFASV 360
Query: 1109 ILFGTNNSSSISGVWVFRGQELAFPLSPDWQVDYESYTWRKLDPGSEETQTLVREYFSWE 1288
ILFGTNNSSSISGVWVFRGQELAFPLSPDWQVDYESYTWRKLDPGSEETQTLVREYFSWE
Sbjct: 361 ILFGTNNSSSISGVWVFRGQELAFPLSPDWQVDYESYTWRKLDPGSEETQTLVREYFSWE 420
Query: 1289 GAYQHVGKAFNQGKIFK 1339
GA+QHVGKAFNQGKIFK
Sbjct: 421 GAFQHVGKAFNQGKIFK 437
Score = 543 bits (1398), Expect = e-154
Identities = 267/307 (86%), Positives = 280/307 (91%)
Frame = +3
Query: 1506 MAAGTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTNHTPEFLRKFPAGKVPA 1685
MAAGTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTN TPEFLRKFPAGKVPA
Sbjct: 1 MAAGTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTNRTPEFLRKFPAGKVPA 60
Query: 1686 FEGDDGFCVFESNAIAYYVSNEELRGSTPEAAAQVVQWVSFADSDIVPPASTWVFPTLGI 1865
FEGDDGFCVFESNAIAYYVSNEELRGSTPEAAAQVVQWVSFADSDIVPPASTWVFPTLGI
Sbjct: 61 FEGDDGFCVFESNAIAYYVSNEELRGSTPEAAAQVVQWVSFADSDIVPPASTWVFPTLGI 120
Query: 1866 MHYNKQATENAKDEVRRVLGLLDAHLKTRTFLVGERVTLADITVVCTLLWLYKQVLEPSF 2045
MH+NKQATENAK+EVRR+LGLLDA+LKTRTFLVGERVTLADITVVCTLLWLYKQVLEPSF
Sbjct: 121 MHHNKQATENAKEEVRRILGLLDAYLKTRTFLVGERVTLADITVVCTLLWLYKQVLEPSF 180
Query: 2046 RQAFPNTNRWFLTCINQPQFRAVLXEVKLCEKMAQFDAKKFAESQPKKDTPRKEKGSREE 2225
RQAFPNTNRWFLTCINQPQFRAVL EVKLCEKMAQFDAKKFAE+QPKKDTPRKEKGSREE
Sbjct: 181 RQAFPNTNRWFLTCINQPQFRAVLGEVKLCEKMAQFDAKKFAETQPKKDTPRKEKGSREE 240
Query: 2226 EQKPQXXXXXXXXXXXXXXXXXLDKCNQAPAS*PQAKDPFAHLPKITFVLEKFNRNLLNK 2405
+QKPQ +D+C QA A+ P+AKDPFAHLPK TFVL++F R N+
Sbjct: 241 KQKPQAERKEEKKAAAPAPEEEMDECEQALAAEPKAKDPFAHLPKSTFVLDEFKRKYSNE 300
Query: 2406 DTLSVAL 2426
DTLSVAL
Sbjct: 301 DTLSVAL 307
>ref|NP_006286.1| valyl-tRNA synthetase [Homo sapiens].
Length = 1264
Score = 120 bits (300), Expect = 8e-27
Identities = 87/252 (34%), Positives = 128/252 (50%), Gaps = 21/252 (8%)
Frame = +2
Query: 41 TLYT--YPENWRAFKALIAAQYS---------GAQVRVLSAPPHFHFGQTNHTPEFLRKF 187
TLY +P+ + + +ALIAA+Y GA R+ PP T+ TP F
Sbjct: 3 TLYVSPHPDAFPSLRALIAARYGEAGEGPGWGGAHPRICLQPP-----PTSRTP-----F 52
Query: 188 PAGKVPAFE-GDDGFCVFESNAIAYYVSNEELRGSTPEAAAQVVQ-WVSFADSDIVPPAS 361
P ++PA E G G V+ + A+A + L G AA +VQ WVS+AD++++P A
Sbjct: 53 PPPRLPALEQGPGGLWVWGATAVAQLLWPAGLGGPGGSRAAVLVQQWVSYADTELIPAAC 112
Query: 362 TWVFPTLGIMHYNKQATENAKDEVRRVLGLLDAHLKTRTFLVGERVTLADITVVCTLLWL 541
P LG+ + Q + + R L L+ L+ T+L GE TLAD+ V LL
Sbjct: 113 GATLPALGLRS-SAQDPQAVLGALGRALSPLEEWLRLHTYLAGEAPTLADLAAVTALLLP 171
Query: 542 YKQVLEPSFRQAFPNTNRWFLTCINQPQFRAVLGEVKLCEKMAQFDAKKFAE-------- 697
++ VL+P R+ + N RWF+TC+ QP+FRAVLGEV L + E
Sbjct: 172 FRYVLDPPARRIWNNVTRWFVTCVRQPEFRAVLGEVVLYSGARPLSHQPGPEAPALPKTA 231
Query: 698 SQPKKDTPRKEK 733
+Q KK+ ++EK
Sbjct: 232 AQLKKEAKKREK 243
Score = 118 bits (296), Expect = 2e-26
Identities = 89/263 (33%), Positives = 131/263 (49%), Gaps = 22/263 (8%)
Frame = +3
Query: 1518 TLYT--YPENWRAFKALIAAQYS---------GAQVRVLSAPPHFHFGQTNHTPEFLRKF 1664
TLY +P+ + + +ALIAA+Y GA R+ PP T+ TP F
Sbjct: 3 TLYVSPHPDAFPSLRALIAARYGEAGEGPGWGGAHPRICLQPP-----PTSRTP-----F 52
Query: 1665 PAGKVPAFE-GDDGFCVFESNAIAYYVSNEELRGSTPEAAAQVVQ-WVSFADSDIVPPAS 1838
P ++PA E G G V+ + A+A + L G AA +VQ WVS+AD++++P A
Sbjct: 53 PPPRLPALEQGPGGLWVWGATAVAQLLWPAGLGGPGGSRAAVLVQQWVSYADTELIPAAC 112
Query: 1839 TWVFPTLGIMHYNKQATENAKDEVRRVLGLLDAHLKTRTFLVGERVTLADITVVCTLLWL 2018
P LG+ + Q + + R L L+ L+ T+L GE TLAD+ V LL
Sbjct: 113 GATLPALGLRS-SAQDPQAVLGALGRALSPLEEWLRLHTYLAGEAPTLADLAAVTALLLP 171
Query: 2019 YKQVLEPSFRQAFPNTNRWFLTCINQPQFRAVLXEVKLCEKMAQFDAKKFAESQPKKDTP 2198
++ VL+P R+ + N RWF+TC+ QP+FRAVL EV L + + QP + P
Sbjct: 172 FRYVLDPPARRIWNNVTRWFVTCVRQPEFRAVLGEVVL------YSGARPLSHQPGPEAP 225
Query: 2199 ---------RKEKGSREEEQKPQ 2240
+KE RE+ +K Q
Sbjct: 226 ALPKTAAQLKKEAKKREKLEKFQ 248
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 97,677,761
Number of extensions: 2744803
Number of successful extensions: 10739
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 10720
Number of HSP's successfully gapped: 4
Length of query: 809
Length of database: 18,297,164
Length adjustment: 111
Effective length of query: 698
Effective length of database: 14,638,160
Effective search space: 10217435680
Effective search space used: 10217435680
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-001666
(2428 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_080283.3| elongation factor 1-gamma [Mus musculus]. 805 0.0
Alignment gi|NP_035820.3| valyl-tRNA synthetase [Mus musculus]. 114 5e-25
>ref|NP_080283.3| elongation factor 1-gamma [Mus musculus].
Length = 437
Score = 805 bits (2079), Expect = 0.0
Identities = 391/437 (89%), Positives = 398/437 (91%)
Frame = +2
Query: 29 MAAGTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTNHTPEFLRKFPAGKVPA 208
MAAGTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTN TPEFLRKFPAGKVPA
Sbjct: 1 MAAGTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTNRTPEFLRKFPAGKVPA 60
Query: 209 FEGDDGFCVFESNAIAYYVSNEELRGSTPEAAAQVVQWVSFADSDIVPPASTWVFPTLGI 388
FEGDDGFCVFESNAIAYYVSNEELRGSTPEAAAQVVQWVSFADSDIVPPASTWVFPTLGI
Sbjct: 61 FEGDDGFCVFESNAIAYYVSNEELRGSTPEAAAQVVQWVSFADSDIVPPASTWVFPTLGI 120
Query: 389 MHYNKQATENAKDEVRRVLGLLDAHLKTRTFLVGERVTLADITVVCTLLWLYKQVLEPSF 568
MH+NKQATENAK+EV+R+LGLLD HLKTRTFLVGERVTLADITVVCTLLWLYKQVLEPSF
Sbjct: 121 MHHNKQATENAKEEVKRILGLLDTHLKTRTFLVGERVTLADITVVCTLLWLYKQVLEPSF 180
Query: 569 RQAFPNTNRWFLTCINQPQFRAVLGEVKLCEKMAQFDAKKFAESQPKKDTPRKEKGSRXX 748
RQAFPNTNRWFLTCINQPQFRA+LGEVKLCEKMAQFDAKKFAESQPKKDTPRKEKGSR
Sbjct: 181 RQAFPNTNRWFLTCINQPQFRAILGEVKLCEKMAQFDAKKFAESQPKKDTPRKEKGSREE 240
Query: 749 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPKAKDPFAHLPKSTFVLDEFKRKYSNE 928
PKAKDPFAHLPKSTFVLDEFKRKYSNE
Sbjct: 241 KQKPQAERKEEKKAAAPAPEEEMDECEQALAAEPKAKDPFAHLPKSTFVLDEFKRKYSNE 300
Query: 929 DTLSVALPYFWEHFDKDGWSLWYSEYRFPEELTQTFMSCNLITGMFQRLDKLRKNAFASV 1108
DTLSVALPYFWEHFDKDGWSLWY+EYRFPEELTQTFMSCNLITGMFQRLDKLRKNAFASV
Sbjct: 301 DTLSVALPYFWEHFDKDGWSLWYAEYRFPEELTQTFMSCNLITGMFQRLDKLRKNAFASV 360
Query: 1109 ILFGTNNSSSISGVWVFRGQELAFPLSPDWQVDYESYTWRKLDPGSEETQTLVREYFSWE 1288
ILFGTNNSSSISGVWVFRGQELAFPLSPDWQVDYESYTWRKLDPGSEETQTLVREYFSWE
Sbjct: 361 ILFGTNNSSSISGVWVFRGQELAFPLSPDWQVDYESYTWRKLDPGSEETQTLVREYFSWE 420
Query: 1289 GAYQHVGKAFNQGKIFK 1339
G +QHVGKA NQGKIFK
Sbjct: 421 GTFQHVGKAVNQGKIFK 437
Score = 543 bits (1399), Expect = e-154
Identities = 266/307 (86%), Positives = 279/307 (90%)
Frame = +3
Query: 1506 MAAGTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTNHTPEFLRKFPAGKVPA 1685
MAAGTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTN TPEFLRKFPAGKVPA
Sbjct: 1 MAAGTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTNRTPEFLRKFPAGKVPA 60
Query: 1686 FEGDDGFCVFESNAIAYYVSNEELRGSTPEAAAQVVQWVSFADSDIVPPASTWVFPTLGI 1865
FEGDDGFCVFESNAIAYYVSNEELRGSTPEAAAQVVQWVSFADSDIVPPASTWVFPTLGI
Sbjct: 61 FEGDDGFCVFESNAIAYYVSNEELRGSTPEAAAQVVQWVSFADSDIVPPASTWVFPTLGI 120
Query: 1866 MHYNKQATENAKDEVRRVLGLLDAHLKTRTFLVGERVTLADITVVCTLLWLYKQVLEPSF 2045
MH+NKQATENAK+EV+R+LGLLD HLKTRTFLVGERVTLADITVVCTLLWLYKQVLEPSF
Sbjct: 121 MHHNKQATENAKEEVKRILGLLDTHLKTRTFLVGERVTLADITVVCTLLWLYKQVLEPSF 180
Query: 2046 RQAFPNTNRWFLTCINQPQFRAVLXEVKLCEKMAQFDAKKFAESQPKKDTPRKEKGSREE 2225
RQAFPNTNRWFLTCINQPQFRA+L EVKLCEKMAQFDAKKFAESQPKKDTPRKEKGSREE
Sbjct: 181 RQAFPNTNRWFLTCINQPQFRAILGEVKLCEKMAQFDAKKFAESQPKKDTPRKEKGSREE 240
Query: 2226 EQKPQXXXXXXXXXXXXXXXXXLDKCNQAPAS*PQAKDPFAHLPKITFVLEKFNRNLLNK 2405
+QKPQ +D+C QA A+ P+AKDPFAHLPK TFVL++F R N+
Sbjct: 241 KQKPQAERKEEKKAAAPAPEEEMDECEQALAAEPKAKDPFAHLPKSTFVLDEFKRKYSNE 300
Query: 2406 DTLSVAL 2426
DTLSVAL
Sbjct: 301 DTLSVAL 307
>ref|NP_035820.3| valyl-tRNA synthetase [Mus musculus].
Length = 1263
Score = 114 bits (284), Expect = 5e-25
Identities = 82/246 (33%), Positives = 127/246 (51%), Gaps = 19/246 (7%)
Frame = +2
Query: 53 YPENWRAFKALIAAQYS---------GAQVRVLSAPPHFHFGQTNHTPEFLRKFPAGKVP 205
+P+ + + +ALIAA+Y G R+ PP ++ TP FP ++P
Sbjct: 9 HPDAFPSLRALIAARYGEAGDGPGWGGPHPRICLQPP-----PSSRTP-----FPPPRLP 58
Query: 206 AFE-GDDGFCVFESNAIAYYVSNEELRGSTPEAAAQVVQ-WVSFADSDIVPPASTWVFPT 379
A E G G V+ + A+A + L G AA +VQ WVS+AD++++P A P
Sbjct: 59 ALEQGPGGLWVWGAPAVAQLLWPAGLGGPGGSRAAVLVQQWVSYADTELIPAACGATLPA 118
Query: 380 LGIMHYNKQATENAKDEVRRVLGLLDAHLKTRTFLVGERVTLADITVVCTLLWLYKQVLE 559
LG+ Q + A + + L L+ L+ T+L G+ TLAD+ V LL ++ VL+
Sbjct: 119 LGLRGPG-QDPQAALGALGKALNPLEDWLRLHTYLAGDAPTLADLAAVTALLLPFRYVLD 177
Query: 560 PSFRQAFPNTNRWFLTCINQPQFRAVLGEVKLC--------EKMAQFDAKKFAESQPKKD 715
PS R+ + N RWF TC+ QP+FRAVLGEV L + ++ A + +Q KK+
Sbjct: 178 PSARRIWGNVTRWFNTCVRQPEFRAVLGEVALYSGARSVTQQPGSEVIAPQKTPAQLKKE 237
Query: 716 TPRKEK 733
++EK
Sbjct: 238 AKKREK 243
Score = 113 bits (283), Expect = 6e-25
Identities = 84/251 (33%), Positives = 127/251 (50%), Gaps = 14/251 (5%)
Frame = +3
Query: 1530 YPENWRAFKALIAAQYS---------GAQVRVLSAPPHFHFGQTNHTPEFLRKFPAGKVP 1682
+P+ + + +ALIAA+Y G R+ PP ++ TP FP ++P
Sbjct: 9 HPDAFPSLRALIAARYGEAGDGPGWGGPHPRICLQPP-----PSSRTP-----FPPPRLP 58
Query: 1683 AFE-GDDGFCVFESNAIAYYVSNEELRGSTPEAAAQVVQ-WVSFADSDIVPPASTWVFPT 1856
A E G G V+ + A+A + L G AA +VQ WVS+AD++++P A P
Sbjct: 59 ALEQGPGGLWVWGAPAVAQLLWPAGLGGPGGSRAAVLVQQWVSYADTELIPAACGATLPA 118
Query: 1857 LGIMHYNKQATENAKDEVRRVLGLLDAHLKTRTFLVGERVTLADITVVCTLLWLYKQVLE 2036
LG+ Q + A + + L L+ L+ T+L G+ TLAD+ V LL ++ VL+
Sbjct: 119 LGLRGPG-QDPQAALGALGKALNPLEDWLRLHTYLAGDAPTLADLAAVTALLLPFRYVLD 177
Query: 2037 PSFRQAFPNTNRWFLTCINQPQFRAVLXEVKLCEKMAQFDAKKFAESQPKKDTP---RKE 2207
PS R+ + N RWF TC+ QP+FRAVL EV L + +E + TP +KE
Sbjct: 178 PSARRIWGNVTRWFNTCVRQPEFRAVLGEVALYSGARSVTQQPGSEVIAPQKTPAQLKKE 237
Query: 2208 KGSREEEQKPQ 2240
RE+ +K Q
Sbjct: 238 AKKREKLEKFQ 248
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 82,527,908
Number of extensions: 2287911
Number of successful extensions: 8848
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 8809
Number of HSP's successfully gapped: 4
Length of query: 809
Length of database: 15,617,559
Length adjustment: 110
Effective length of query: 699
Effective length of database: 12,313,599
Effective search space: 8607205701
Effective search space used: 8607205701
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-001666
(2428 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001182307.1| valyl-tRNA synthetase [Sus scrofa]. 122 1e-27
>ref|NP_001182307.1| valyl-tRNA synthetase [Sus scrofa].
Length = 1265
Score = 122 bits (305), Expect = 1e-27
Identities = 86/246 (34%), Positives = 127/246 (51%), Gaps = 19/246 (7%)
Frame = +2
Query: 53 YPENWRAFKALIAAQYS---------GAQVRVLSAPPHFHFGQTNHTPEFLRKFPAGKVP 205
+P+ + + +ALIAA+Y GA RV PP + TP FP ++P
Sbjct: 9 HPDAFPSLRALIAARYGEAGEGPGWGGAHPRVCLQPP-----PASRTP-----FPPPRLP 58
Query: 206 AFE-GDDGFCVFESNAIAYYVSNEELRGSTPEAAAQVVQ-WVSFADSDIVPPASTWVFPT 379
A E G G V+ + A+A + L G AA +VQ WVS+AD++++P A P
Sbjct: 59 ALEQGPGGLWVWGATAVAQLLWPAGLGGPGGSRAAVLVQQWVSYADTELIPAACGATLPA 118
Query: 380 LGIMHYNKQATENAKDEVRRVLGLLDAHLKTRTFLVGERVTLADITVVCTLLWLYKQVLE 559
LG+ + Q + A + R L L+ L+ T+L GE TLAD+ V LL ++ VL+
Sbjct: 119 LGLRS-SAQDPQAALGALGRALSPLEEWLRLHTYLAGEAPTLADLAAVTALLLPFRYVLD 177
Query: 560 PSFRQAFPNTNRWFLTCINQPQFRAVLGEVKLC--------EKMAQFDAKKFAESQPKKD 715
PS R+ + N RWF+TC+ QP+FRAVLGEV L + + A +Q KK+
Sbjct: 178 PSARRIWGNVTRWFITCVQQPEFRAVLGEVVLFSGTRPASQQPGPEVSAPTKTAAQLKKE 237
Query: 716 TPRKEK 733
++EK
Sbjct: 238 AKKREK 243
Score = 120 bits (301), Expect = 3e-27
Identities = 87/248 (35%), Positives = 126/248 (50%), Gaps = 13/248 (5%)
Frame = +3
Query: 1530 YPENWRAFKALIAAQYS---------GAQVRVLSAPPHFHFGQTNHTPEFLRKFPAGKVP 1682
+P+ + + +ALIAA+Y GA RV PP + TP FP ++P
Sbjct: 9 HPDAFPSLRALIAARYGEAGEGPGWGGAHPRVCLQPP-----PASRTP-----FPPPRLP 58
Query: 1683 AFE-GDDGFCVFESNAIAYYVSNEELRGSTPEAAAQVVQ-WVSFADSDIVPPASTWVFPT 1856
A E G G V+ + A+A + L G AA +VQ WVS+AD++++P A P
Sbjct: 59 ALEQGPGGLWVWGATAVAQLLWPAGLGGPGGSRAAVLVQQWVSYADTELIPAACGATLPA 118
Query: 1857 LGIMHYNKQATENAKDEVRRVLGLLDAHLKTRTFLVGERVTLADITVVCTLLWLYKQVLE 2036
LG+ + Q + A + R L L+ L+ T+L GE TLAD+ V LL ++ VL+
Sbjct: 119 LGLRS-SAQDPQAALGALGRALSPLEEWLRLHTYLAGEAPTLADLAAVTALLLPFRYVLD 177
Query: 2037 PSFRQAFPNTNRWFLTCINQPQFRAVLXEVKLCEKMAQFDAKKFAESQ--PKKDTPRKEK 2210
PS R+ + N RWF+TC+ QP+FRAVL EV L F + A Q P+ P K
Sbjct: 178 PSARRIWGNVTRWFITCVQQPEFRAVLGEVVL------FSGTRPASQQPGPEVSAPTKTA 231
Query: 2211 GSREEEQK 2234
++E K
Sbjct: 232 AQLKKEAK 239
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 62,242,462
Number of extensions: 1877447
Number of successful extensions: 7019
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 7005
Number of HSP's successfully gapped: 2
Length of query: 809
Length of database: 11,343,932
Length adjustment: 107
Effective length of query: 702
Effective length of database: 8,679,953
Effective search space: 6093327006
Effective search space used: 6093327006
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-001666
(2428 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr01 1913 0.0
Sscrofa_Chr02 468 e-129
gb|GL895585.2| Sus scrofa unplaced genomic scaffold ChrUScaf3469 157 3e-35
Sscrofa_Chr12 157 3e-35
Sscrofa_Chr11 64 4e-07
>Sscrofa_Chr01
|| Length = 315321322
Score = 1913 bits (965), Expect = 0.0
Identities = 1299/1409 (92%), Gaps = 1/1409 (0%)
Strand = Plus / Minus
Query: 10 ttttctctgcggaatcaccatggcggccgggaccctgtacacatatcctgaaaactggag 69
|||||| ||| |||||||| ||| ||| ||||||||||||||||||||||||||||| ||
Sbjct: 93500642 ttttctttgcagaatcaccgtggtggctgggaccctgtacacatatcctgaaaactgcag 93500583
Query: 70 ggccttcaaagccctcattgccgctcagtacagcggggctcaggtccgcgtgctctccgc 129
| ||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||
Sbjct: 93500582 gcccttcaaagccctcattgccgctcagtacagtggggctcaggtccatgtgctctccga 93500523
Query: 130 accaccccacttccattttggccaaaccaaccacacccccgaatttctccgtaaatttcc 189
|||| ||||||| ||||||||||||||||||||||||||| |||| |||| |||||||||
Sbjct: 93500522 accatcccacttacattttggccaaaccaaccacacccccaaattgctccataaatttcc 93500463
Query: 190 tgccggtaaggttccagcatttgagggtgacgatggattctgtgtgttcgagagcaatgc 249
||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
Sbjct: 93500462 tgctggtaaggttccagcatttgagggtgacggtggattctgtgtgttcgagagcaatcc 93500403
Query: 250 cattgcctactacgtgagcaacgaggagctgcggggaagtactcctgaggcagcagccca 309
|||||||| || ||||||||| |||||||| ||| ||||||| | |||||||||||||
Sbjct: 93500402 cattgcctgctgtgtgagcaacaaggagctgtgggaaagtacttccaaggcagcagccca 93500343
Query: 310 ggtggtgcagtgggtgagctttgccgatagcgacatcgtgccccccgccagtacctgggt 369
||| ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||
Sbjct: 93500342 ggttgtgcagtgggtgagctttgccgatagcaacatcgtgcccccggccagtacctgggt 93500283
Query: 370 gttccccaccttgggcatcatgcactacaacaagcaggccacagagaatgcaaaggatga 429
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 93500282 gttccccaccttgggcatcatgcattacaacaagcaggccacagagaatgcaaaggatga 93500223
Query: 430 ggtgaggcgagttctggggctgctggatgctcacttgaagacgaggacttttctggtggg 489
||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 93500222 ggtgaggtgagttctggggctgctggatgctcacttgaagacagggacttttctggtggg 93500163
Query: 490 cgaacgtgtgacgctggctgacatcacagttgtctgcaccctgttgtggctctacaaaca 549
|||||||||||| ||||| |||||||||||||||||||||| | |||||||||||||||
Sbjct: 93500162 cgaacgtgtgacactggccaacatcacagttgtctgcaccctatcgtggctctacaaaca 93500103
Query: 550 ggtcctggagccttctttccgccaggccttccccaataccaaccgctggttcctcacctg 609
|||||||||| |||||||| |||||||||| ||||||||||| |||||||||||||||
Sbjct: 93500102 ggtcctggagttttctttccaccaggccttctgcaataccaaccactggttcctcacctg 93500043
Query: 610 cattaaccagccccagttccgggctgtcttgggggaggtgaagctctgtgagaagatggc 669
| ||||| ||||| |||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 93500042 cgttaacaagccctagttccgggctgtcttggaggaggtgaagctctgtgagaagatggc 93499983
Query: 670 ccagtttgatgctaaaaagtttgcagagagtcagcctaaaaaggacaccccacggaaaga 729
||| ||||||||||||||||||||||||| |||||||||||| ||||||||| |||||||
Sbjct: 93499982 ccaatttgatgctaaaaagtttgcagagaatcagcctaaaaatgacaccccatggaaaga 93499923
Query: 730 gaaaggttctcgagaagagaagcagaagccccaggctgagcggaaagaggagaagaaggc 789
|||||||||| ||| ||| |||||||| ||||||||||||| |||||||||||| |||||
Sbjct: 93499922 gaaaggttctggaggagaaaagcagaaaccccaggctgagcagaaagaggagaaaaaggc 93499863
Query: 790 agctgctcctgctcctgaggaggagctggacgagtgtgagcaggcgctggctgctgagcc 849
| ||||||| |||||||||||||| ||||||||||||||||||| |||||| |||||||
Sbjct: 93499862 aactgctcccactcctgaggaggagatggacgagtgtgagcaggcactggcttctgagcc 93499803
Query: 850 caaggccaaggatccctttgctcacctacccaagagtacctttgtgttggacgaatttaa 909
||||||||||||||||||||| ||||| |||||| |||||||||||||||||||||||
Sbjct: 93499802 caaggccaaggatccctttgcccacctgtgcaagagcacctttgtgttggacgaatttaa 93499743
Query: 910 gcgcaagtactccaacgaggacacactctctgtggcgctgccgtacttctgggagcactt 969
||||||||||||||| ||||||| |||||||||||| |||| ||||| ||||||||||||
Sbjct: 93499742 gcgcaagtactccaatgaggacatactctctgtggcactgctgtactcctgggagcactt 93499683
Query: 970 tgataaggatggctggtccttgtggtactcggagtaccgcttccctgaagagctcaccca 1029
|||||||||||||||||||||||| ||||| ||||| |||| |||||||||||| |||
Sbjct: 93499682 tgataaggatggctggtccttgtgatactccaggtaccacttctctgaagagctcaacca 93499623
Query: 1030 gaccttcatgagctgcaacctcatcactggaatgttccagcgattggacaagctgaggaa 1089
||||||||||||||||||||| |||||| |||||||||||| ||||||||||||||||||
Sbjct: 93499622 gaccttcatgagctgcaaccttatcactagaatgttccagcaattggacaagctgaggaa 93499563
Query: 1090 gaatgcctttgccagtgtcattctctttggaaccaacaacagcagctccatttctggagt 1149
||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 93499562 gaatg-ttttgccagtgtcattctctttggaaccaacaacagcagctccatctctggtgt 93499504
Query: 1150 ctgggtcttccgaggccaggagcttgcctttccgctgagtccagattggcaggtggacta 1209
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93499503 ctgggtcttccaaggccaggagcttgcctttccgctgagtccagattggcaggtggacta 93499444
Query: 1210 cgagtcatacacgtggcggaaactggatcctggcagcgaggagacccagacgctggttcg 1269
||||||||||| ||| ||||||||||||||||||||||| ||||||||| ||||||||
Sbjct: 93499443 tgagtcatacacatggtggaaactggatcctggcagcgagaagacccagatgctggttca 93499384
Query: 1270 agaatacttttcctgggagggggcctaccagcatgtgggcaaagccttcaatcagggcaa 1329
|||||||||||||||||||||||||| |||||||||| | |||||||||||||||| ||
Sbjct: 93499383 agaatacttttcctgggagggggcctgccagcatgtgcacgaagccttcaatcagggtaa 93499324
Query: 1330 gatcttcaagtgaacatctcttgccatcgcctagcagcctgcttctgcccttcagggaga 1389
|||||||||| |||| |||||||||||| |||||| |||||| |||||||||||| |||
Sbjct: 93499323 gatcttcaagagaacgtctcttgccatcacctagctgcctgcacctgcccttcaggaaga 93499264
Query: 1390 gtgggggtcattaaaggaaactgaacatt 1418
||||||||||||||||||||||||||||
Sbjct: 93499263 atgggggtcattaaaggaaactgaacatt 93499235
Score = 983 bits (496), Expect = 0.0
Identities = 657/711 (92%)
Strand = Plus / Minus
Query: 1488 tttctctgcggaatcaccatggcggccgggaccctgtacacatatcctgaaaactggagg 1547
||||| ||| |||||||| ||| ||| ||||||||||||||||||||||||||||| |||
Sbjct: 93500641 tttctttgcagaatcaccgtggtggctgggaccctgtacacatatcctgaaaactgcagg 93500582
Query: 1548 gccttcaaagccctcattgccgctcagtacagcggggctcaggtccgcgtgctctccgca 1607
||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| |
Sbjct: 93500581 cccttcaaagccctcattgccgctcagtacagtggggctcaggtccatgtgctctccgaa 93500522
Query: 1608 ccaccccacttccattttggccaaaccaaccacacccccgaatttctccgtaaatttcct 1667
||| ||||||| ||||||||||||||||||||||||||| |||| |||| ||||||||||
Sbjct: 93500521 ccatcccacttacattttggccaaaccaaccacacccccaaattgctccataaatttcct 93500462
Query: 1668 gccggtaaggttccagcatttgagggtgacgatggattctgtgtgttcgagagcaatgcc 1727
|| |||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||
Sbjct: 93500461 gctggtaaggttccagcatttgagggtgacggtggattctgtgtgttcgagagcaatccc 93500402
Query: 1728 attgcctactacgtgagcaacgaggagctgcggggaagtactcctgaggcagcagcccag 1787
||||||| || ||||||||| |||||||| ||| ||||||| | ||||||||||||||
Sbjct: 93500401 attgcctgctgtgtgagcaacaaggagctgtgggaaagtacttccaaggcagcagcccag 93500342
Query: 1788 gtggtgcagtgggtgagctttgccgatagcgacatcgtgccccccgccagtacctgggtg 1847
|| ||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct: 93500341 gttgtgcagtgggtgagctttgccgatagcaacatcgtgcccccggccagtacctgggtg 93500282
Query: 1848 ttccccaccttgggcatcatgcactacaacaagcaggccacagagaatgcaaaggatgag 1907
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 93500281 ttccccaccttgggcatcatgcattacaacaagcaggccacagagaatgcaaaggatgag 93500222
Query: 1908 gtgaggcgagttctggggctgctggatgctcacttgaagacgaggacttttctggtgggc 1967
|||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 93500221 gtgaggtgagttctggggctgctggatgctcacttgaagacagggacttttctggtgggc 93500162
Query: 1968 gaacgtgtgacgctggctgacatcacagttgtctgcaccctgttgtggctctacaaacag 2027
||||||||||| ||||| |||||||||||||||||||||| | ||||||||||||||||
Sbjct: 93500161 gaacgtgtgacactggccaacatcacagttgtctgcaccctatcgtggctctacaaacag 93500102
Query: 2028 gtcctggagccttctttccgccaggccttccccaataccaaccgctggttcctcacctgc 2087
||||||||| |||||||| |||||||||| ||||||||||| ||||||||||||||||
Sbjct: 93500101 gtcctggagttttctttccaccaggccttctgcaataccaaccactggttcctcacctgc 93500042
Query: 2088 attaaccagccccagttccgggctgtcttgngggaggtgaagctctgtgagaagatggcc 2147
||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 93500041 gttaacaagccctagttccgggctgtcttggaggaggtgaagctctgtgagaagatggcc 93499982
Query: 2148 cagtttgatgctaaaaagtttgcagagagtcagcctaaaaaggacacccca 2198
|| ||||||||||||||||||||||||| |||||||||||| |||||||||
Sbjct: 93499981 caatttgatgctaaaaagtttgcagagaatcagcctaaaaatgacacccca 93499931
>Sscrofa_Chr02
|| Length = 162569375
Score = 468 bits (236), Expect = e-129
Identities = 236/236 (100%)
Strand = Plus / Plus
Query: 1183 gctgagtccagattggcaggtggactacgagtcatacacgtggcggaaactggatcctgg 1242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8517875 gctgagtccagattggcaggtggactacgagtcatacacgtggcggaaactggatcctgg 8517934
Query: 1243 cagcgaggagacccagacgctggttcgagaatacttttcctgggagggggcctaccagca 1302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8517935 cagcgaggagacccagacgctggttcgagaatacttttcctgggagggggcctaccagca 8517994
Query: 1303 tgtgggcaaagccttcaatcagggcaagatcttcaagtgaacatctcttgccatcgccta 1362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8517995 tgtgggcaaagccttcaatcagggcaagatcttcaagtgaacatctcttgccatcgccta 8518054
Query: 1363 gcagcctgcttctgcccttcagggagagtgggggtcattaaaggaaactgaacatt 1418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8518055 gcagcctgcttctgcccttcagggagagtgggggtcattaaaggaaactgaacatt 8518110
Score = 408 bits (206), Expect = e-111
Identities = 206/206 (100%)
Strand = Plus / Plus
Query: 680 gctaaaaagtttgcagagagtcagcctaaaaaggacaccccacggaaagagaaaggttct 739
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8514373 gctaaaaagtttgcagagagtcagcctaaaaaggacaccccacggaaagagaaaggttct 8514432
Query: 740 cgagaagagaagcagaagccccaggctgagcggaaagaggagaagaaggcagctgctcct 799
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8514433 cgagaagagaagcagaagccccaggctgagcggaaagaggagaagaaggcagctgctcct 8514492
Query: 800 gctcctgaggaggagctggacgagtgtgagcaggcgctggctgctgagcccaaggccaag 859
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8514493 gctcctgaggaggagctggacgagtgtgagcaggcgctggctgctgagcccaaggccaag 8514552
Query: 860 gatccctttgctcacctacccaagag 885
||||||||||||||||||||||||||
Sbjct: 8514553 gatccctttgctcacctacccaagag 8514578
Score = 349 bits (176), Expect = 5e-93
Identities = 176/176 (100%)
Strand = Plus / Plus
Query: 884 agtacctttgtgttggacgaatttaagcgcaagtactccaacgaggacacactctctgtg 943
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8517274 agtacctttgtgttggacgaatttaagcgcaagtactccaacgaggacacactctctgtg 8517333
Query: 944 gcgctgccgtacttctgggagcactttgataaggatggctggtccttgtggtactcggag 1003
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8517334 gcgctgccgtacttctgggagcactttgataaggatggctggtccttgtggtactcggag 8517393
Query: 1004 taccgcttccctgaagagctcacccagaccttcatgagctgcaacctcatcactgg 1059
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8517394 taccgcttccctgaagagctcacccagaccttcatgagctgcaacctcatcactgg 8517449
Score = 321 bits (162), Expect = 1e-84
Identities = 162/162 (100%)
Strand = Plus / Plus
Query: 40 gaccctgtacacatatcctgaaaactggagggccttcaaagccctcattgccgctcagta 99
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8509143 gaccctgtacacatatcctgaaaactggagggccttcaaagccctcattgccgctcagta 8509202
Query: 100 cagcggggctcaggtccgcgtgctctccgcaccaccccacttccattttggccaaaccaa 159
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8509203 cagcggggctcaggtccgcgtgctctccgcaccaccccacttccattttggccaaaccaa 8509262
Query: 160 ccacacccccgaatttctccgtaaatttcctgccggtaaggt 201
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8509263 ccacacccccgaatttctccgtaaatttcctgccggtaaggt 8509304
Score = 321 bits (162), Expect = 1e-84
Identities = 162/162 (100%)
Strand = Plus / Plus
Query: 1517 gaccctgtacacatatcctgaaaactggagggccttcaaagccctcattgccgctcagta 1576
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8509143 gaccctgtacacatatcctgaaaactggagggccttcaaagccctcattgccgctcagta 8509202
Query: 1577 cagcggggctcaggtccgcgtgctctccgcaccaccccacttccattttggccaaaccaa 1636
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8509203 cagcggggctcaggtccgcgtgctctccgcaccaccccacttccattttggccaaaccaa 8509262
Query: 1637 ccacacccccgaatttctccgtaaatttcctgccggtaaggt 1678
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8509263 ccacacccccgaatttctccgtaaatttcctgccggtaaggt 8509304
Score = 295 bits (149), Expect = 6e-77
Identities = 149/149 (100%)
Strand = Plus / Plus
Query: 404 caggccacagagaatgcaaaggatgaggtgaggcgagttctggggctgctggatgctcac 463
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8511088 caggccacagagaatgcaaaggatgaggtgaggcgagttctggggctgctggatgctcac 8511147
Query: 464 ttgaagacgaggacttttctggtgggcgaacgtgtgacgctggctgacatcacagttgtc 523
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8511148 ttgaagacgaggacttttctggtgggcgaacgtgtgacgctggctgacatcacagttgtc 8511207
Query: 524 tgcaccctgttgtggctctacaaacaggt 552
|||||||||||||||||||||||||||||
Sbjct: 8511208 tgcaccctgttgtggctctacaaacaggt 8511236
Score = 295 bits (149), Expect = 6e-77
Identities = 149/149 (100%)
Strand = Plus / Plus
Query: 1881 caggccacagagaatgcaaaggatgaggtgaggcgagttctggggctgctggatgctcac 1940
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8511088 caggccacagagaatgcaaaggatgaggtgaggcgagttctggggctgctggatgctcac 8511147
Query: 1941 ttgaagacgaggacttttctggtgggcgaacgtgtgacgctggctgacatcacagttgtc 2000
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8511148 ttgaagacgaggacttttctggtgggcgaacgtgtgacgctggctgacatcacagttgtc 8511207
Query: 2001 tgcaccctgttgtggctctacaaacaggt 2029
|||||||||||||||||||||||||||||
Sbjct: 8511208 tgcaccctgttgtggctctacaaacaggt 8511236
Score = 287 bits (145), Expect = 1e-74
Identities = 145/145 (100%)
Strand = Plus / Plus
Query: 263 gtgagcaacgaggagctgcggggaagtactcctgaggcagcagcccaggtggtgcagtgg 322
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8510203 gtgagcaacgaggagctgcggggaagtactcctgaggcagcagcccaggtggtgcagtgg 8510262
Query: 323 gtgagctttgccgatagcgacatcgtgccccccgccagtacctgggtgttccccaccttg 382
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8510263 gtgagctttgccgatagcgacatcgtgccccccgccagtacctgggtgttccccaccttg 8510322
Query: 383 ggcatcatgcactacaacaagcagg 407
|||||||||||||||||||||||||
Sbjct: 8510323 ggcatcatgcactacaacaagcagg 8510347
Score = 287 bits (145), Expect = 1e-74
Identities = 145/145 (100%)
Strand = Plus / Plus
Query: 1740 gtgagcaacgaggagctgcggggaagtactcctgaggcagcagcccaggtggtgcagtgg 1799
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8510203 gtgagcaacgaggagctgcggggaagtactcctgaggcagcagcccaggtggtgcagtgg 8510262
Query: 1800 gtgagctttgccgatagcgacatcgtgccccccgccagtacctgggtgttccccaccttg 1859
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8510263 gtgagctttgccgatagcgacatcgtgccccccgccagtacctgggtgttccccaccttg 8510322
Query: 1860 ggcatcatgcactacaacaagcagg 1884
|||||||||||||||||||||||||
Sbjct: 8510323 ggcatcatgcactacaacaagcagg 8510347
Score = 264 bits (133), Expect = 2e-67
Identities = 133/133 (100%)
Strand = Plus / Plus
Query: 548 caggtcctggagccttctttccgccaggccttccccaataccaaccgctggttcctcacc 607
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8513891 caggtcctggagccttctttccgccaggccttccccaataccaaccgctggttcctcacc 8513950
Query: 608 tgcattaaccagccccagttccgggctgtcttgggggaggtgaagctctgtgagaagatg 667
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8513951 tgcattaaccagccccagttccgggctgtcttgggggaggtgaagctctgtgagaagatg 8514010
Query: 668 gcccagtttgatg 680
|||||||||||||
Sbjct: 8514011 gcccagtttgatg 8514023
Score = 258 bits (130), Expect = 1e-65
Identities = 132/133 (99%)
Strand = Plus / Plus
Query: 2025 caggtcctggagccttctttccgccaggccttccccaataccaaccgctggttcctcacc 2084
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8513891 caggtcctggagccttctttccgccaggccttccccaataccaaccgctggttcctcacc 8513950
Query: 2085 tgcattaaccagccccagttccgggctgtcttgngggaggtgaagctctgtgagaagatg 2144
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 8513951 tgcattaaccagccccagttccgggctgtcttgggggaggtgaagctctgtgagaagatg 8514010
Query: 2145 gcccagtttgatg 2157
|||||||||||||
Sbjct: 8514011 gcccagtttgatg 8514023
Score = 252 bits (127), Expect = 8e-64
Identities = 130/131 (99%)
Strand = Plus / Plus
Query: 1058 ggaatgttccagcgattggacaagctgaggaagaatgcctttgccagtgtcattctcttt 1117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8517531 ggaatgttccagcgattggacaagctgaggaagaatgcctttgccagtgtcattctcttt 8517590
Query: 1118 ggaaccaacaacagcagctccatttctggagtctgggtcttccgaggccaggagcttgcc 1177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8517591 ggaaccaacaacagcagctccatttctggagtctgggtcttccgaggccaggagcttgcc 8517650
Query: 1178 tttccgctgag 1188
|||||| ||||
Sbjct: 8517651 tttccggtgag 8517661
Score = 131 bits (66), Expect = 2e-27
Identities = 66/66 (100%)
Strand = Plus / Plus
Query: 198 aggttccagcatttgagggtgacgatggattctgtgtgttcgagagcaatgccattgcct 257
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8509983 aggttccagcatttgagggtgacgatggattctgtgtgttcgagagcaatgccattgcct 8510042
Query: 258 actacg 263
||||||
Sbjct: 8510043 actacg 8510048
Score = 131 bits (66), Expect = 2e-27
Identities = 66/66 (100%)
Strand = Plus / Plus
Query: 1675 aggttccagcatttgagggtgacgatggattctgtgtgttcgagagcaatgccattgcct 1734
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8509983 aggttccagcatttgagggtgacgatggattctgtgtgttcgagagcaatgccattgcct 8510042
Query: 1735 actacg 1740
||||||
Sbjct: 8510043 actacg 8510048
Score = 87.7 bits (44), Expect = 3e-14
Identities = 44/44 (100%)
Strand = Plus / Plus
Query: 2157 gctaaaaagtttgcagagagtcagcctaaaaaggacaccccacg 2200
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8514373 gctaaaaagtttgcagagagtcagcctaaaaaggacaccccacg 8514416
Score = 61.9 bits (31), Expect = 2e-06
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 1487 ctttctctgcggaatcaccatggcggccggg 1517
|||||||||||||||||||||||||||||||
Sbjct: 8508025 ctttctctgcggaatcaccatggcggccggg 8508055
Score = 60.0 bits (30), Expect = 6e-06
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 11 tttctctgcggaatcaccatggcggccggg 40
||||||||||||||||||||||||||||||
Sbjct: 8508026 tttctctgcggaatcaccatggcggccggg 8508055
>gb|GL895585.2| Sus scrofa unplaced genomic scaffold ChrUScaf3469
Length = 227798
Score = 157 bits (79), Expect = 3e-35
Identities = 124/139 (89%)
Strand = Plus / Minus
Query: 1280 tcctgggagggggcctaccagcatgtgggcaaagccttcaatcagggcaagatcttcaag 1339
|||||||||||||||| |||||||||| |||||||||||||| | | ||||||||| |
Sbjct: 193813 tcctgggagggggccttccagcatgtgagcaaagccttcaataacagggagatcttcagg 193754
Query: 1340 tgaacatctcttgccatcgcctagcagcctgcttctgcccttcagggagagtgggggtca 1399
||||||||||||||||| ||||||| |||||| |||||||||||||||| |||| || |
Sbjct: 193753 tgaacatctcttgccattgcctagctgcctgcacctgcccttcagggagaatgggagtaa 193694
Query: 1400 ttaaaggaaactgaacatt 1418
|||||||||||||||||||
Sbjct: 193693 ttaaaggaaactgaacatt 193675
>Sscrofa_Chr12
|| Length = 63588571
Score = 157 bits (79), Expect = 3e-35
Identities = 124/139 (89%)
Strand = Plus / Minus
Query: 1280 tcctgggagggggcctaccagcatgtgggcaaagccttcaatcagggcaagatcttcaag 1339
|||||||||||||||| |||||||||| |||||||||||||| | | ||||||||| |
Sbjct: 31496701 tcctgggagggggccttccagcatgtgagcaaagccttcaataacagggagatcttcagg 31496642
Query: 1340 tgaacatctcttgccatcgcctagcagcctgcttctgcccttcagggagagtgggggtca 1399
||||||||||||||||| ||||||| |||||| |||||||||||||||| |||| || |
Sbjct: 31496641 tgaacatctcttgccattgcctagctgcctgcacctgcccttcagggagaatgggagtaa 31496582
Query: 1400 ttaaaggaaactgaacatt 1418
|||||||||||||||||||
Sbjct: 31496581 ttaaaggaaactgaacatt 31496563
>Sscrofa_Chr11
|| Length = 87690581
Score = 63.9 bits (32), Expect = 4e-07
Identities = 114/140 (81%), Gaps = 1/140 (0%)
Strand = Plus / Minus
Query: 1586 tcaggtccgcgtgctctccgcaccaccccacttccattttggccaaaccaaccacacccc 1645
||||||| | ||||||| | || ||| ||||||||| ||||||||||||| | |||| |
Sbjct: 41555745 tcaggtctgtgtgctcttcacatcactccacttccactttggccaaaccagctgcacctc 41555686
Query: 1646 cgaatttctccgtaaatttcctgccggtaaggttccagcatttgagggtgacgatggatt 1705
| ||||||| |||||| |||| || ||| |||||||||||||| |||| ||||| ||
Sbjct: 41555685 tgcatttctctacaaattttctgctggaaagtttccagcatttgagagtgatgatgg-tt 41555627
Query: 1706 ctgtgtgttcgagagcaatg 1725
||| ||||| |||||||||
Sbjct: 41555626 ctgcgtgtttaagagcaatg 41555607
Score = 63.9 bits (32), Expect = 4e-07
Identities = 114/140 (81%), Gaps = 1/140 (0%)
Strand = Plus / Minus
Query: 109 tcaggtccgcgtgctctccgcaccaccccacttccattttggccaaaccaaccacacccc 168
||||||| | ||||||| | || ||| ||||||||| ||||||||||||| | |||| |
Sbjct: 41555745 tcaggtctgtgtgctcttcacatcactccacttccactttggccaaaccagctgcacctc 41555686
Query: 169 cgaatttctccgtaaatttcctgccggtaaggttccagcatttgagggtgacgatggatt 228
| ||||||| |||||| |||| || ||| |||||||||||||| |||| ||||| ||
Sbjct: 41555685 tgcatttctctacaaattttctgctggaaagtttccagcatttgagagtgatgatgg-tt 41555627
Query: 229 ctgtgtgttcgagagcaatg 248
||| ||||| |||||||||
Sbjct: 41555626 ctgcgtgtttaagagcaatg 41555607
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 64,637,424
Number of extensions: 409
Number of successful extensions: 409
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 404
Number of HSP's successfully gapped: 23
Length of query: 2428
Length of database: 2,808,509,378
Length adjustment: 22
Effective length of query: 2406
Effective length of database: 2,808,408,574
Effective search space: 6757031029044
Effective search space used: 6757031029044
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)