Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-001685
(1102 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_777247.1| dehydrogenase/reductase SDR family member 4 [Bo... 392 e-109
Alignment gi|NP_001069359.1| L-xylulose reductase [Bos taurus]. 100 2e-21
Alignment gi|NP_001193891.1| L-xylulose reductase-like [Bos taurus]. 99 9e-21
Alignment gi|NP_001039789.1| estradiol 17-beta-dehydrogenase 8 [Bos tauru... 94 2e-19
Alignment gi|NP_001077186.1| carbonyl reductase family member 4 [Bos taur... 88 1e-17
Alignment gi|NP_001030260.1| dehydrogenase/reductase SDR family member 11... 88 2e-17
Alignment gi|NP_001029660.1| 3-hydroxybutyrate dehydrogenase type 2 [Bos ... 87 2e-17
Alignment gi|NP_001068891.1| 2,4-dienoyl-CoA reductase, mitochondrial [Bo... 87 3e-17
Alignment gi|NP_777126.1| 17-beta-hydroxysteroid dehydrogenase 14 [Bos ta... 84 3e-16
Alignment gi|NP_001007810.1| peroxisomal multifunctional enzyme type 2 [B... 81 1e-15
>ref|NP_777247.1| dehydrogenase/reductase SDR family member 4 [Bos taurus].
Length = 260
Score = 392 bits (1008), Expect = e-109
Identities = 197/248 (79%), Positives = 223/248 (89%)
Frame = +2
Query: 83 MASTGVERRKPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQG 262
MAS G+ RR PL+NKVALVTASTDGIG AIARRLAQDGAHVVVSSRKQ+NVDR VATL+G
Sbjct: 1 MASCGMARRNPLDNKVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDRAVATLKG 60
Query: 263 EGLSVTGTVCHVGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKIL 442
EGLSVTGTVCHVGKAEDRERLVA AV LHGGVDIL+SNAAV+PFFG+++D EEVWDKIL
Sbjct: 61 EGLSVTGTVCHVGKAEDRERLVATAVKLHGGVDILISNAAVSPFFGSLMDVPEEVWDKIL 120
Query: 443 HVNVKATVLMTKAVVPEMEKRGYREGGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTKN 622
VNVKAT L+TKAVVPEM KRG GGS++IVSS+ AY PFP+LGPYNVSKTALLGLTKN
Sbjct: 121 DVNVKATALLTKAVVPEMAKRG---GGSIVIVSSIAAYSPFPSLGPYNVSKTALLGLTKN 177
Query: 623 LAVELAPRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKESLRIRRLGNPEDCAGIVSFL 802
LA+ELA N+RVNCLAPGLI+T+FS+VLW D AR+E +K + +I+R+G PE+CAGIVSFL
Sbjct: 178 LALELAESNVRVNCLAPGLIRTSFSRVLWEDPARQESIKATFQIKRIGKPEECAGIVSFL 237
Query: 803 CSEDASYI 826
CSEDASYI
Sbjct: 238 CSEDASYI 245
>ref|NP_001069359.1| L-xylulose reductase [Bos taurus].
Length = 244
Score = 100 bits (249), Expect = 2e-21
Identities = 78/235 (33%), Positives = 116/235 (49%)
Frame = +2
Query: 116 LENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCH 295
L + ALVT + GIG +I + L GA VV SR Q ++D V G TVC
Sbjct: 5 LAGRRALVTGAGKGIGRSIVKALHAAGARVVAVSRTQADLDSLVRECPG-----VETVC- 58
Query: 296 VGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMT 475
V A+ A+ G VD+LV+NAAV F ++ T+E +D VN++A + ++
Sbjct: 59 VDLAD--WEATEQALGGVGPVDLLVNNAAV-AFLQPFLEVTKEAYDMSFSVNLRAVIQVS 115
Query: 476 KAVVPEMEKRGYREGGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTKNLAVELAPRNIR 655
+ V + RG G ++ VSS + N Y +K AL LTK +AVEL P IR
Sbjct: 116 QIVARGLIARG--APGVIVNVSSQASQRGLTNHSVYCSTKGALDTLTKVMAVELGPHKIR 173
Query: 656 VNCLAPGLIKTNFSQVLWMDKARKEYMKESLRIRRLGNPEDCAGIVSFLCSEDAS 820
VN + P ++ T Q W D + + M + + + R E+ + FL S+ +S
Sbjct: 174 VNAVNPTVVMTPMGQAAWSDPQKAKAMLDRIPLGRFAEVENVVDTILFLLSDRSS 228
>ref|NP_001193891.1| L-xylulose reductase-like [Bos taurus].
Length = 244
Score = 98.6 bits (244), Expect = 9e-21
Identities = 77/230 (33%), Positives = 119/230 (51%), Gaps = 3/230 (1%)
Frame = +2
Query: 131 ALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAE 310
ALVT + GIG + L GA VV SR N D + +L E + +G +
Sbjct: 10 ALVTGAGKGIGRDTVKALYASGARVVAVSRT--NAD--LVSLSKECPGIEPVCVDLGDWK 65
Query: 311 DRERLVAMAVNLHGGVDILVSNAAV---NPFFGNIIDATEEVWDKILHVNVKATVLMTKA 481
E+ A+ G VD+LV+NAAV PF ++ T+E +D+ VN+++ +++
Sbjct: 66 ATEK----ALGGVGPVDLLVNNAAVALMRPF----LEVTKEDFDRSFSVNLRSAFQVSQI 117
Query: 482 VVPEMEKRGYREGGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTKNLAVELAPRNIRVN 661
V M RG GS++ VSS+ A+ FPNL Y+ +K A+ LTK++A+EL P IRVN
Sbjct: 118 VARGMINRGVP--GSIVNVSSMVAHVTFPNLAAYSTTKGAMTMLTKSMAMELGPYKIRVN 175
Query: 662 CLAPGLIKTNFSQVLWMDKARKEYMKESLRIRRLGNPEDCAGIVSFLCSE 811
+ P ++ T Q + D + +KE +R+ ED + FL S+
Sbjct: 176 SVNPTVVLTAMGQKVSADPEFSQKLKERHPLRKFAEVEDVVNSILFLLSD 225
>ref|NP_001039789.1| estradiol 17-beta-dehydrogenase 8 [Bos taurus].
Length = 259
Score = 94.0 bits (232), Expect = 2e-19
Identities = 76/249 (30%), Positives = 116/249 (46%), Gaps = 12/249 (4%)
Frame = +2
Query: 116 LENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGL-------- 271
L + +ALVT + GIG AI+ RLA +GA V TV L G G
Sbjct: 7 LRSALALVTGAGGGIGRAISVRLAAEGAAVAACDLDGAAARETVQLLGGPGTEEGAPRGA 66
Query: 272 --SVTGTVCHVGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILH 445
+ V G A V + V + + + F ++ +E+ WDK++
Sbjct: 67 HAAFQADVSEAGAARRLLEQVQACFSRPPSVVVSCAGITRDEF---LLHMSEDNWDKVIA 123
Query: 446 VNVKATVLMTKAVVPEMEKRGYREGGSVLIVSSVGAYHPFPNLGP--YNVSKTALLGLTK 619
VN+K L+T+A + G GS++ +SS+ N+G Y SK ++GLT+
Sbjct: 124 VNLKGIFLVTQAAAQALVSSGCP--GSIINISSI--IGKVGNMGQTNYAASKAGVIGLTQ 179
Query: 620 NLAVELAPRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKESLRIRRLGNPEDCAGIVSF 799
+ A EL IR N + PG I+T +Q + K + + + +GNPED A +V+F
Sbjct: 180 SAARELGRHGIRCNSVLPGFIRTPMTQKVPQKVLDK--VTGMIPMAHMGNPEDVADVVAF 237
Query: 800 LCSEDASYI 826
L SED+ YI
Sbjct: 238 LASEDSGYI 246
>ref|NP_001077186.1| carbonyl reductase family member 4 [Bos taurus].
Length = 237
Score = 88.2 bits (217), Expect = 1e-17
Identities = 68/227 (29%), Positives = 113/227 (49%)
Frame = +2
Query: 122 NKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVG 301
+KV V + GIG A+AR +AQ G + + +R E L G+ L+++ C V
Sbjct: 2 DKVCAVFGGSRGIGRAVARLMAQRGYRLAIVARNLEGARAAAGDLGGDHLALS---CDVA 58
Query: 302 KAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKA 481
K D + G V+ LV+ A +N + TE++ + LH N+ ++L +A
Sbjct: 59 KEHDVQNTFEEIEKNLGRVNFLVNAAGINRDNLLVRTNTEDMLSQ-LHTNLLGSMLTCRA 117
Query: 482 VVPEMEKRGYREGGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTKNLAVELAPRNIRVN 661
+ M K+ + GS++ V SV Y+ SK L+G ++ LA E+A + IRVN
Sbjct: 118 ALKTMIKQ---QRGSIVNVGSVVGLKGNSGQSVYSASKGGLVGFSRALAKEVAKKKIRVN 174
Query: 662 CLAPGLIKTNFSQVLWMDKARKEYMKESLRIRRLGNPEDCAGIVSFL 802
+APG I T+ ++ L +E +K+++ + R G+ D A FL
Sbjct: 175 VVAPGFIHTDMTKDL-----NEELLKKNIPLGRFGDALDVAQAAVFL 216
>ref|NP_001030260.1| dehydrogenase/reductase SDR family member 11 precursor [Bos
taurus].
Length = 255
Score = 87.8 bits (216), Expect = 2e-17
Identities = 72/237 (30%), Positives = 118/237 (49%), Gaps = 8/237 (3%)
Frame = +2
Query: 122 NKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTV---- 289
+++ALVT ++ GIG A+AR L Q G VV +R N++ A + G GT+
Sbjct: 6 DRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAG--YPGTLIPYR 63
Query: 290 CHVGKAEDRERLVAMAVNLHGGVDILVSNAAV-NPFFGNIIDATEEVWDKILHVNVKATV 466
C + ED + + + H GVDI ++NA + P ++ + W ++ +VNV A
Sbjct: 64 CDLSNEEDILSMFSAVRSQHSGVDICINNAGLARP--DTLLSGSTSGWKEMFNVNVLALS 121
Query: 467 LMTKAVVPEMEKRGYREGGSVLIVSSVGAYHPFP-NLGPYNVSKTALLGLTKNLAVEL-- 637
+ T+ M +R +G + I S G P P Y+ +K A+ LT+ L EL
Sbjct: 122 ICTREACQSMRERKVDDGHIININSMCGHRVPPPAETHFYSATKYAVTALTEGLRQELRE 181
Query: 638 APRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKESLRIRRLGNPEDCAGIVSFLCS 808
A +IR C++PG+++T F+ L DK ++ ++ L PED A V ++ S
Sbjct: 182 ARSHIRATCISPGVVETQFAFKL-HDKDPEKAAATYEHMKCL-KPEDVAEAVIYVLS 236
>ref|NP_001029660.1| 3-hydroxybutyrate dehydrogenase type 2 [Bos taurus].
Length = 245
Score = 87.4 bits (215), Expect = 2e-17
Identities = 72/246 (29%), Positives = 124/246 (50%), Gaps = 9/246 (3%)
Frame = +2
Query: 116 LENKVALVTASTDGIGLAIARRLAQDGAHVV---VSSRKQENVDRTVATLQGEGLSVTGT 286
L+ KV ++TA+ GIG A A A++GA V+ ++ K + +D+ + L VT
Sbjct: 4 LDGKVIVLTAAAQGIGRAAALAFAKEGAKVIATDINDSKLQELDKYPG-IHTRVLDVTKK 62
Query: 287 VCHVGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATV 466
A D ERL D+L N A G I+D E WD +++NV++
Sbjct: 63 KQIDQFANDIERL-----------DVLF-NVAGFVHHGTILDCEETDWDFSMNLNVRSMY 110
Query: 467 LMTKAVVPEMEKRGYREGGSVLIVSSVGA-YHPFPNLGPYNVSKTALLGLTKNLAVELAP 643
LM KA +P+M + + G+++ +SSV + N Y+ +K A++GLTK++A +
Sbjct: 111 LMIKAFLPKMMAQ---KSGNIINMSSVASSIKGVVNRCVYSTTKAAVIGLTKSVAADFIQ 167
Query: 644 RNIRVNCLAPGLIKTNFSQVLWM-----DKARKEYMKESLRIRRLGNPEDCAGIVSFLCS 808
+ IR NC+ PG + T Q ++A +++K + R E+ A + +L S
Sbjct: 168 QGIRCNCVCPGTVDTPSLQERIQARPNPEEALSDFLKRQ-KTGRFATAEEVALLCVYLAS 226
Query: 809 EDASYI 826
++++YI
Sbjct: 227 DESAYI 232
>ref|NP_001068891.1| 2,4-dienoyl-CoA reductase, mitochondrial [Bos taurus].
Length = 329
Score = 86.7 bits (213), Expect = 3e-17
Identities = 71/243 (29%), Positives = 118/243 (48%), Gaps = 7/243 (2%)
Frame = +2
Query: 119 ENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGE-GLSVTGTVCH 295
+ KVA +T G+G + L+ GA V++SRK + + T + + G V C
Sbjct: 52 QGKVAFITGGGTGLGKGMTTCLSSLGAQCVIASRKIDVLKVTAEQISSQTGNKVHAIQCD 111
Query: 296 VGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEV----WDKILHVNVKAT 463
V + + V+ + + G DI+++NAA GN I +E + W I + + T
Sbjct: 112 VRDPDMVQNAVSETIKVIGHPDIVINNAA-----GNFISPSERLSPNAWKTITDIVLNGT 166
Query: 464 VLMTKAVVPEMEKRGYREGGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTKNLAVELAP 643
+T A+ E+ K ++G S L ++++ A + P +K + L K+LA E
Sbjct: 167 AFVTLAIGKELIKA--QKGASFLAITTIYAETGSGFVVPSASAKAGVEALNKSLAAEWGK 224
Query: 644 RNIRVNCLAPGLIKTN--FSQVLWMDKARKEYMKESLRIRRLGNPEDCAGIVSFLCSEDA 817
+R N + PG IKT FS++ KE M + + RLG E+ A + +FLCS+ A
Sbjct: 225 YGMRFNVIQPGPIKTKGAFSRLDPTGAFEKE-MIDRIPCGRLGTVEELANLAAFLCSDYA 283
Query: 818 SYI 826
S+I
Sbjct: 284 SWI 286
>ref|NP_777126.1| 17-beta-hydroxysteroid dehydrogenase 14 [Bos taurus].
Length = 270
Score = 83.6 bits (205), Expect = 3e-16
Identities = 69/239 (28%), Positives = 110/239 (46%), Gaps = 10/239 (4%)
Frame = +2
Query: 125 KVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGK 304
KV +VT GIG I R + GA VV+ + + L G +C V +
Sbjct: 10 KVVIVTGGGRGIGAGIVRAFVESGAQVVICDKDEARGRAVERELPG----TVFLLCDVTR 65
Query: 305 AEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAV 484
ED LV+ + G +D +V+NA +P + + + + ++L +N+ T +TK
Sbjct: 66 EEDVRTLVSETIRRFGRLDCIVNNAGYHPPPQWPEETSAQGFRQLLELNLLGTYTLTKLA 125
Query: 485 VPEMEKRGYREGGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTKNLAVELAPRNIRVNC 664
+P + K G + I S VGA + PY +K A+ +TK LA++ + +RVNC
Sbjct: 126 LPHLRKS---RGNVINISSLVGAIGQSQAV-PYVATKGAVTAMTKALALDESQYGVRVNC 181
Query: 665 LAPGLIKTNFSQVLWMDKA----------RKEYMKESLRIRRLGNPEDCAGIVSFLCSE 811
++PG I T LW + A R+ + + L R+G P + A FL SE
Sbjct: 182 ISPGNIWT----PLWEELAASTPDPTATIREGTLAQPL--GRMGQPAEVAAAAVFLASE 234
>ref|NP_001007810.1| peroxisomal multifunctional enzyme type 2 [Bos taurus].
Length = 736
Score = 81.3 bits (199), Expect = 1e-15
Identities = 69/240 (28%), Positives = 116/240 (48%), Gaps = 11/240 (4%)
Frame = +2
Query: 125 KVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQE---------NVDRTVATLQGEGLSV 277
+V LVT + G+G A A A+ GA VVV+ + + + D+ V ++ +G
Sbjct: 10 RVVLVTGAGGGLGRAYALAFAERGASVVVNDLRGDFTGVGKGSLSADKVVEEIRRKGGKA 69
Query: 278 TGTVCHVGKAEDRERLVAMAVNLHGGVDILVSNAAV--NPFFGNIIDATEEVWDKILHVN 451
V + E+ E++V A++ G +DI+++NA + + F I D E WDKI V+
Sbjct: 70 ---VANYDSVEEGEKIVKTALDAFGRIDIVINNAGILRDRSFSRISD---EDWDKIQRVH 123
Query: 452 VKATVLMTKAVVPEMEKRGYREGGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTKNLAV 631
++ + L+T+A M+K+ + G +++ SS + Y +K LLGL+ LAV
Sbjct: 124 LRGSFLVTRAAWDHMKKQKF---GRIIMTSSASRIYGNFGQANYCAAKLGLLGLSNCLAV 180
Query: 632 ELAPRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKESLRIRRLGNPEDCAGIVSFLCSE 811
E NI N +AP +L E + E+L+ P+ A +V +LC E
Sbjct: 181 EGKKNNIHCNTIAPTAGSRMTQSIL------PEDLVEALK------PDYVAPLVLWLCHE 228
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 46,980,799
Number of extensions: 1405621
Number of successful extensions: 6173
Number of sequences better than 1.0e-05: 40
Number of HSP's gapped: 6066
Number of HSP's successfully gapped: 40
Length of query: 367
Length of database: 17,681,374
Length adjustment: 104
Effective length of query: 263
Effective length of database: 14,240,222
Effective search space: 3745178386
Effective search space used: 3745178386
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-001685
(1102 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001041699.1| dehydrogenase/reductase SDR family member 4 ... 398 e-111
Alignment gi|XP_547738.2| PREDICTED: similar to dehydrogenase/reductase (... 326 3e-89
Alignment gi|XP_547739.1| PREDICTED: similar to dehydrogenase/reductase m... 283 3e-76
Alignment gi|XP_851139.1| PREDICTED: similar to peroxisomal trans-2-enoyl... 101 1e-21
Alignment gi|XP_532316.2| PREDICTED: similar to peroxisomal trans-2-enoyl... 100 2e-21
Alignment gi|XP_849704.1| PREDICTED: similar to Lung carbonyl reductase [... 97 3e-20
Alignment gi|XP_536060.2| PREDICTED: similar to peroxisomal trans-2-enoyl... 93 4e-19
Alignment gi|XP_535676.1| PREDICTED: similar to dehydrogenase/reductase (... 92 9e-19
Alignment gi|XP_851004.1| PREDICTED: similar to Estradiol 17-beta-dehydro... 92 1e-18
Alignment gi|XP_534547.1| PREDICTED: similar to carbonic reductase 4 [Can... 90 4e-18
>ref|NP_001041699.1| dehydrogenase/reductase SDR family member 4 [Canis lupus
familiaris].
Length = 255
Score = 398 bits (1023), Expect = e-111
Identities = 201/241 (83%), Positives = 220/241 (91%)
Frame = +2
Query: 104 RRKPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTG 283
R+ PL NKVALVTASTDGIG AIARRLA+DGAHVVVSSRKQ NVDR VA LQGEGLSVTG
Sbjct: 3 RQDPLANKVALVTASTDGIGFAIARRLARDGAHVVVSSRKQHNVDRAVAALQGEGLSVTG 62
Query: 284 TVCHVGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKAT 463
TVCHVGKAEDRERLVA AVNLHGG+DIL+SNAAVNPFFGN++D TEEVWDKIL +NVKAT
Sbjct: 63 TVCHVGKAEDRERLVATAVNLHGGIDILISNAAVNPFFGNLMDVTEEVWDKILDINVKAT 122
Query: 464 VLMTKAVVPEMEKRGYREGGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTKNLAVELAP 643
LMTKAVVPEMEKRG GGSV+IV+S+GAY PFP LGPYNVSKTALLGLTKNLA EL
Sbjct: 123 ALMTKAVVPEMEKRG---GGSVVIVASIGAYLPFPGLGPYNVSKTALLGLTKNLARELDQ 179
Query: 644 RNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKESLRIRRLGNPEDCAGIVSFLCSEDASY 823
RNIRVNCLAPGLIKT+FS+VLWMDKAR+E +K+ ++IRR+G P+DCAGIVSFLCSEDASY
Sbjct: 180 RNIRVNCLAPGLIKTSFSKVLWMDKAREESIKKVMQIRRMGKPDDCAGIVSFLCSEDASY 239
Query: 824 I 826
I
Sbjct: 240 I 240
>ref|XP_547738.2| PREDICTED: similar to dehydrogenase/reductase (SDR family) member 2
isoform 2 [Canis familiaris].
Length = 370
Score = 326 bits (835), Expect = 3e-89
Identities = 166/251 (66%), Positives = 199/251 (79%)
Frame = +2
Query: 74 SVRMASTGVERRKPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVAT 253
SVRM STG++++ L N+VA+VT +TDGIG AIARRLA+DGAHVVVSSRKQ NVDR VA
Sbjct: 109 SVRMNSTGIDQKGVLANRVAVVTGATDGIGFAIARRLARDGAHVVVSSRKQHNVDRAVAA 168
Query: 254 LQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWD 433
LQGEGLSVTGTVCHVGKAEDRERLVA + +GG+D LV NAAVNP + + A+EEVWD
Sbjct: 169 LQGEGLSVTGTVCHVGKAEDRERLVATVLEHYGGLDFLVCNAAVNPLVRSTLQASEEVWD 228
Query: 434 KILHVNVKATVLMTKAVVPEMEKRGYREGGSVLIVSSVGAYHPFPNLGPYNVSKTALLGL 613
KIL VNVK+ L+ ++P ME RG G+V++VSS+ AY P LGPYNVSKTALLGL
Sbjct: 229 KILDVNVKSPALLLSQLLPHMENRGM---GAVILVSSIAAYIPHVELGPYNVSKTALLGL 285
Query: 614 TKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKESLRIRRLGNPEDCAGIV 793
T+ L++ELAP+ IRVNCL PG+IKTNFS+VL M++ KE R++RLG PEDCAG+V
Sbjct: 286 TRTLSLELAPKGIRVNCLVPGIIKTNFSKVLHMNEVFWNNFKEKYRLQRLGQPEDCAGLV 345
Query: 794 SFLCSEDASYI 826
SFLCS DA YI
Sbjct: 346 SFLCSPDACYI 356
>ref|XP_547739.1| PREDICTED: similar to dehydrogenase/reductase member 2 [Canis
familiaris].
Length = 278
Score = 283 bits (723), Expect = 3e-76
Identities = 155/267 (58%), Positives = 184/267 (68%), Gaps = 19/267 (7%)
Frame = +2
Query: 83 MASTGVERRKPLENKVALVTASTDG-------------------IGLAIARRLAQDGAHV 205
M+S +R L +KVA++T ST G IG AIARRLA+DGAHV
Sbjct: 1 MSSNRTDRSYALADKVAVITGSTKGLPGGGWGGDEATVAISAHRIGFAIARRLARDGAHV 60
Query: 206 VVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHGGVDILVSNAAV 385
VVSSRKQ NVDR VA LQGEGLSVTGTVCHVGKAEDRERLVA A+ +GGVD LV A V
Sbjct: 61 VVSSRKQHNVDRAVAALQGEGLSVTGTVCHVGKAEDRERLVATALEHYGGVDFLVCVAGV 120
Query: 386 NPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGYREGGSVLIVSSVGAYHPF 565
NP G+ + A+E+VWDK+L VNVK+ L+ ++P ME RG GSV++VSS+ AY P
Sbjct: 121 NPLVGSTLGASEQVWDKVLDVNVKSPALLLSQLLPHMENRG---AGSVVLVSSMVAYVPI 177
Query: 566 PNLGPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKES 745
P LG YN SKTALLGL K+LA+ELAP+ IRVNCL PG+IKT+F QV +
Sbjct: 178 PKLGVYNTSKTALLGLCKSLAIELAPKGIRVNCLVPGIIKTDFMQVEKTLPYLLPDFNDI 237
Query: 746 LRIRRLGNPEDCAGIVSFLCSEDASYI 826
++R G PE+CAGIVSFLCS DASYI
Sbjct: 238 YGLQRFGEPEECAGIVSFLCSSDASYI 264
>ref|XP_851139.1| PREDICTED: similar to peroxisomal trans-2-enoyl-CoA reductase
isoform 2 [Canis familiaris].
Length = 303
Score = 101 bits (252), Expect = 1e-21
Identities = 80/261 (30%), Positives = 126/261 (48%), Gaps = 18/261 (6%)
Frame = +2
Query: 98 VERRKPLE-----NKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQG 262
VERR L +++A+VT GIG AIA L G +VV++SR + + T L+
Sbjct: 5 VERRSFLAPDLLLHQLAIVTGGATGIGKAIATELLHLGCNVVIASRNFDRLKSTAEELRA 64
Query: 263 E-----GLSVTGTVCHVGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEV 427
VT C++ K E+ LV + ++G ++ LV+N G + A E +
Sbjct: 65 SLPPTNKAQVTPIKCNIRKEEEVNNLVRSTLEIYGKINFLVNNGG-----GQFMAAMEHI 119
Query: 428 ----WDKILHVNVKATVLMTKAVVPEMEKRGYREGGSV--LIVSSVGAYHPFPNLGPYNV 589
W ++ N+ T M KAV K GGS+ +I+ + Y F + G
Sbjct: 120 NAKGWHAVIETNLTGTFYMCKAVYNSWMKE---HGGSIVNIIILTRNGYPGFTHSG---A 173
Query: 590 SKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMK--ESLRIRRL 763
++ + LTK+LAVE A IR+NC+APG I + + + A + E + +R+
Sbjct: 174 ARAGVYNLTKSLAVEWASSGIRINCVAPGTIYSPSAVDNYGPLAENMFAGYFEKIPAKRI 233
Query: 764 GNPEDCAGIVSFLCSEDASYI 826
G PE+ + +V FL S AS+I
Sbjct: 234 GVPEEISSVVCFLLSPAASFI 254
>ref|XP_532316.2| PREDICTED: similar to peroxisomal trans-2-enoyl-CoA reductase
[Canis familiaris].
Length = 303
Score = 100 bits (250), Expect = 2e-21
Identities = 80/261 (30%), Positives = 127/261 (48%), Gaps = 18/261 (6%)
Frame = +2
Query: 98 VERRKPLE-----NKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQG 262
VERR L +++A+VT GIG AIA L G +VV++SR + + T L+
Sbjct: 5 VERRSFLAPGLLLHQLAIVTGGATGIGKAIATELLHLGCNVVIASRNFDRLKSTAEELRA 64
Query: 263 E-----GLSVTGTVCHVGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEV 427
VT C++ K E+ LV + ++G ++ LV+N G + A E +
Sbjct: 65 SLPPTNQAQVTPIKCNIRKEEEVNNLVRSTLEIYGKINFLVNNGG-----GQFVAAMEHI 119
Query: 428 ----WDKILHVNVKATVLMTKAVVPEMEKRGYREGGSV--LIVSSVGAYHPFPNLGPYNV 589
W ++ +N+ T M KAV K GGS+ +I+ + Y F + G
Sbjct: 120 NAKGWHAVIEINLTGTFYMCKAVYNSWMKE---PGGSIVNIIILTRNGYPGFTHSG---A 173
Query: 590 SKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKESLRI--RRL 763
++ + LTK+LAVE A IR+NC+APG I + + + A + +I +R+
Sbjct: 174 ARAGVYNLTKSLAVEWASSGIRINCVAPGTIYSPSAVDNYGPLAENMFAGYFGKIPAKRI 233
Query: 764 GNPEDCAGIVSFLCSEDASYI 826
G PE+ + +V FL S AS+I
Sbjct: 234 GVPEEISSVVCFLLSPAASFI 254
>ref|XP_849704.1| PREDICTED: similar to Lung carbonyl reductase [NADPH]
(NADPH-dependent carbonyl reductase) (LCR) (Adipocyte
P27 protein) (AP27) [Canis familiaris].
Length = 270
Score = 97.1 bits (240), Expect = 3e-20
Identities = 78/223 (34%), Positives = 117/223 (52%), Gaps = 4/223 (1%)
Frame = +2
Query: 155 GIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVC-HVGKAEDRERLVA 331
GIG + L GA V+ SR N D + + G+ TVC +G E ER
Sbjct: 44 GIGRDTVKALHGLGARVLAVSRT--NTDLVSLSKECPGIE---TVCVDLGDWEATER--- 95
Query: 332 MAVNLHGGVDILVSNAAV---NPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEK 502
A+ G VD+LV+NAAV PF ++ T+E +D+ +VN+++ V +++ V M
Sbjct: 96 -ALGSVGPVDLLVNNAAVALLQPF----LEVTKEAFDRAFNVNLRSVVQVSQIVARGMIH 150
Query: 503 RGYREGGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLI 682
RG GS++ VSS+ A+ FPNL Y+ +K A+ LTK +A EL P IRVN + P ++
Sbjct: 151 RGVP--GSIVNVSSMVAHVTFPNLSVYSSTKGAMTMLTKAMASELGPYQIRVNSVDPTVV 208
Query: 683 KTNFSQVLWMDKARKEYMKESLRIRRLGNPEDCAGIVSFLCSE 811
T SQ + D +KE +R+ + ED + FL S+
Sbjct: 209 PTAMSQKILTDPELVRKLKERHPLRKFADMEDVVNSILFLLSD 251
>ref|XP_536060.2| PREDICTED: similar to peroxisomal trans-2-enoyl-CoA reductase
isoform 1 [Canis familiaris].
Length = 333
Score = 93.2 bits (230), Expect = 4e-19
Identities = 80/288 (27%), Positives = 129/288 (44%), Gaps = 45/288 (15%)
Frame = +2
Query: 98 VERRKPLE-----NKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQG 262
VERR L +++A+VT GIG AIA L G +VV++SR + + T L+
Sbjct: 5 VERRSFLAPDLLLHQLAIVTGGATGIGKAIATELLHLGCNVVIASRNFDRLKSTAEELRA 64
Query: 263 E-----GLSVTGTVCHVGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEV 427
VT C++ K E+ LV + ++G ++ LV+N G + A E +
Sbjct: 65 SLPPTNKAQVTPIKCNIRKEEEVNNLVRSTLEIYGKINFLVNNGG-----GQFMAAMEHI 119
Query: 428 ----WDKILHVNVKATVLMTKAVVPEMEKRGYRE-------------------------- 517
W ++ N+ T M KA + +K Y +
Sbjct: 120 NAKGWHAVIETNLTGTFYMCKAGKNQTQKTTYLDEKRIRTLFHVIVIVLFPAVYNSWMKE 179
Query: 518 -GGSV--LIVSSVGAYHPFPNLGPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKT 688
GGS+ +I+ + Y F + G ++ + LTK+LAVE A IR+NC+APG I +
Sbjct: 180 HGGSIVNIIILTRNGYPGFTHSG---AARAGVYNLTKSLAVEWASSGIRINCVAPGTIYS 236
Query: 689 NFSQVLWMDKARKEYMK--ESLRIRRLGNPEDCAGIVSFLCSEDASYI 826
+ + A + E + +R+G PE+ + +V FL S AS+I
Sbjct: 237 PSAVDNYGPLAENMFAGYFEKIPAKRIGVPEEISSVVCFLLSPAASFI 284
>ref|XP_535676.1| PREDICTED: similar to dehydrogenase/reductase (SDR family) member 6
[Canis familiaris].
Length = 245
Score = 92.0 bits (227), Expect = 9e-19
Identities = 68/244 (27%), Positives = 121/244 (49%), Gaps = 7/244 (2%)
Frame = +2
Query: 116 LENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRT--VATLQGEGLSVTGTV 289
L+ KV ++TA+ GIG A A A++GA V+ + + + +Q L VT
Sbjct: 4 LDGKVIVLTAAAQGIGRAAALAFAREGAKVIATDINESKLQELEKYPGIQTRTLDVT--- 60
Query: 290 CHVGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVL 469
+++ + N G +D+L N A G I+D E+ WD +++N+++ L
Sbjct: 61 --------KKKQIDQFANEIGRLDVLF-NVAGFVHHGTILDCEEKDWDFSMNLNIRSMYL 111
Query: 470 MTKAVVPEMEKRGYREGGSVLIVSSVGA-YHPFPNLGPYNVSKTALLGLTKNLAVELAPR 646
M KA +P+M + + G+++ +SSV + N Y+ +K A++GLTK+LA + +
Sbjct: 112 MIKAFLPKMLAQ---KSGNIINMSSVASSIKGVENRCVYSTTKAAVIGLTKSLATDFIQQ 168
Query: 647 NIRVNCLAPGLIKTNFSQVLWMDKARKE----YMKESLRIRRLGNPEDCAGIVSFLCSED 814
IR NC+ P + T Q + E Y + +I R E+ A + +L S++
Sbjct: 169 GIRCNCVCPATVDTPSLQERIQARPNTEEALNYFLKRQKIGRFATAEEIALLCVYLASDE 228
Query: 815 ASYI 826
++YI
Sbjct: 229 SAYI 232
>ref|XP_851004.1| PREDICTED: similar to Estradiol 17-beta-dehydrogenase 8
(17-beta-HSD 8) (17-beta-hydroxysteroid dehydrogenase 8)
(Protein Ke6) (Ke-6) isoform 2 [Canis familiaris].
Length = 259
Score = 91.7 bits (226), Expect = 1e-18
Identities = 74/244 (30%), Positives = 115/244 (47%), Gaps = 7/244 (2%)
Frame = +2
Query: 116 LENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGL-------S 274
L + +ALVT + GIG A++ RLA++GA V + TV L G+G +
Sbjct: 7 LRSALALVTGAGSGIGRAVSVRLAKEGATVAACDLDRAAACETVWLLGGQGSEKVAPGGA 66
Query: 275 VTGTVCHVGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNV 454
T V +A RL+ +V + A ++ +E+ WD+++ VN+
Sbjct: 67 HTAFQADVSEAGAVRRLLEQVQACFSRPPSVVVSCAGLTRDEFLLRMSEDDWDRVIAVNL 126
Query: 455 KATVLMTKAVVPEMEKRGYREGGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTKNLAVE 634
K L+T+A + G R GS++ +SS+ Y SK ++GLT+ A E
Sbjct: 127 KGIFLVTQAAAQALVSSGCR--GSIINISSIVGKVGNVGQTNYAASKAGVIGLTQTAARE 184
Query: 635 LAPRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKESLRIRRLGNPEDCAGIVSFLCSED 814
L IR N + PG I T +Q + K + + + LG+PED A V+FL SED
Sbjct: 185 LGRHGIRCNSVLPGFITTPMTQKVPQKVLDK--VIGMIPMGHLGDPEDVADAVTFLASED 242
Query: 815 ASYI 826
+ YI
Sbjct: 243 SGYI 246
>ref|XP_534547.1| PREDICTED: similar to carbonic reductase 4 [Canis familiaris].
Length = 237
Score = 89.7 bits (221), Expect = 4e-18
Identities = 67/227 (29%), Positives = 115/227 (50%)
Frame = +2
Query: 122 NKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVG 301
++V V + GIG A+A+ +AQ G + V +R E L G+ L+ + C V
Sbjct: 2 DRVCAVFGGSRGIGRAVAQVMAQKGYRLAVIARNLEGARAAAGELGGDHLAFS---CDVA 58
Query: 302 KAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKA 481
K D + G V+ LV+ A +N + TE++ + LH N+ ++L KA
Sbjct: 59 KERDVQNTFEEMEKNLGRVNFLVNAAGINRDSLLVRTKTEDMISQ-LHTNLLGSMLTCKA 117
Query: 482 VVPEMEKRGYREGGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTKNLAVELAPRNIRVN 661
+ M ++ + GS++ V S+ Y+ SK L+G ++ LA E+A + IRVN
Sbjct: 118 ALKTMIQQ---QRGSIVNVGSIIGLKGNSGQSVYSASKGGLVGFSRALAKEVARKKIRVN 174
Query: 662 CLAPGLIKTNFSQVLWMDKARKEYMKESLRIRRLGNPEDCAGIVSFL 802
+APG + T+ ++ L ++E++K+++ + R G P D A V FL
Sbjct: 175 VVAPGFVHTDMTKDL-----KEEHLKKNIPLGRFGEPIDVAHAVVFL 216
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 48,922,864
Number of extensions: 1446177
Number of successful extensions: 6169
Number of sequences better than 1.0e-05: 51
Number of HSP's gapped: 6051
Number of HSP's successfully gapped: 51
Length of query: 367
Length of database: 18,874,504
Length adjustment: 104
Effective length of query: 263
Effective length of database: 15,407,560
Effective search space: 4052188280
Effective search space used: 4052188280
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-001685
(1102 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_066284.2| dehydrogenase/reductase SDR family member 4 [Ho... 420 e-117
Alignment gi|NP_001075957.1| putative dehydrogenase/reductase SDR family ... 343 1e-94
Alignment gi|NP_932349.2| dehydrogenase/reductase SDR family member 4-lik... 316 3e-88
Alignment gi|NP_005785.1| dehydrogenase/reductase SDR family member 2 iso... 301 5e-82
Alignment gi|NP_878912.1| dehydrogenase/reductase SDR family member 2 iso... 266 3e-75
Alignment gi|NP_001180564.1| dehydrogenase/reductase SDR family member 4-... 193 1e-51
Alignment gi|NP_001180565.1| dehydrogenase/reductase SDR family member 4-... 171 9e-45
Alignment gi|NP_060911.2| peroxisomal trans-2-enoyl-CoA reductase [Homo s... 98 2e-20
Alignment gi|NP_055049.1| estradiol 17-beta-dehydrogenase 8 [Homo sapiens]. 97 2e-20
Alignment gi|NP_057370.1| L-xylulose reductase isoform 1 [Homo sapiens]. 94 2e-19
>ref|NP_066284.2| dehydrogenase/reductase SDR family member 4 [Homo sapiens].
Length = 278
Score = 420 bits (1080), Expect = e-117
Identities = 218/282 (77%), Positives = 238/282 (84%)
Frame = +2
Query: 26 MRAAGQLLRACSQTWKSVRMASTGVERRKPLENKVALVTASTDGIGLAIARRLAQDGAHV 205
M AG LL C++ W SVRMAS+G+ RR PL NKVALVTASTDGIG AIARRLAQDGAHV
Sbjct: 1 MHKAG-LLGLCARAWNSVRMASSGMTRRDPLANKVALVTASTDGIGFAIARRLAQDGAHV 59
Query: 206 VVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHGGVDILVSNAAV 385
VVSSRKQ+NVD+ VATLQGEGLSVTGTVCHVGKAEDRERLVA AV LHGG+DILVSNAAV
Sbjct: 60 VVSSRKQQNVDQAVATLQGEGLSVTGTVCHVGKAEDRERLVATAVKLHGGIDILVSNAAV 119
Query: 386 NPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGYREGGSVLIVSSVGAYHPF 565
NPFFG+I+D TEEVWDK L +NVKA LMTKAVVPEMEKRG GGSV+IVSS+ A+ P
Sbjct: 120 NPFFGSIMDVTEEVWDKTLDINVKAPALMTKAVVPEMEKRG---GGSVVIVSSIAAFSPS 176
Query: 566 PNLGPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKES 745
P PYNVSKTALLGLTK LA+ELAPRNIRVNCLAPGLIKT+FS++LWMDK ++E MKE+
Sbjct: 177 PGFSPYNVSKTALLGLTKTLAIELAPRNIRVNCLAPGLIKTSFSRMLWMDKEKEESMKET 236
Query: 746 LRIRRLGNPEDCAGIVSFLCSEDASYIXXXXXXXXXXXASRL 871
LRIRRLG PEDCAGIVSFLCSEDASYI SRL
Sbjct: 237 LRIRRLGEPEDCAGIVSFLCSEDASYITGETVVVGGGTPSRL 278
>ref|NP_001075957.1| putative dehydrogenase/reductase SDR family member 4-like 2 [Homo
sapiens].
Length = 281
Score = 343 bits (881), Expect = 1e-94
Identities = 180/275 (65%), Positives = 212/275 (77%), Gaps = 3/275 (1%)
Frame = +2
Query: 56 CSQTWKSVRMASTGVERRKPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENV 235
C++ KSVR+AS+G+ RR PL NKVALVTASTD IG A+A+RLAQDGAHVVVS RKQ+NV
Sbjct: 10 CARAGKSVRLASSGMTRRDPLTNKVALVTASTDWIGFAVAQRLAQDGAHVVVSRRKQQNV 69
Query: 236 DRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHGGVDIL---VSNAAVNPFFGNI 406
D+ VATLQGEGLS+TGTVCHVGK +D ERLVA A+ LHG +DIL ++N+ F+ +
Sbjct: 70 DQAVATLQGEGLSMTGTVCHVGKMKDWERLVATAMKLHGVIDILSLSITNSKRGLFWFTL 129
Query: 407 IDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGYREGGSVLIVSSVGAYHPFPNLGPYN 586
+ EE WD+ L +N KA LM KAVVPEMEKRG GGSV ++SV A+ P P PYN
Sbjct: 130 LQTAEEAWDRNLDINGKALALMIKAVVPEMEKRG---GGSVGFLASVAAFRPLPGFSPYN 186
Query: 587 VSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKESLRIRRLG 766
VSKTALLGL K LA+ELAPRNIRVNCLAPGLIKT+FS++LWMDK ++E MKE+LRIRRLG
Sbjct: 187 VSKTALLGLNKTLAIELAPRNIRVNCLAPGLIKTSFSRMLWMDKEKEESMKETLRIRRLG 246
Query: 767 NPEDCAGIVSFLCSEDASYIXXXXXXXXXXXASRL 871
PED GIVSFLCSEDASY+ SRL
Sbjct: 247 EPEDSLGIVSFLCSEDASYLTGETVMVGGGTPSRL 281
>ref|NP_932349.2| dehydrogenase/reductase SDR family member 4-like 2 isoform 1
precursor [Homo sapiens].
Length = 232
Score = 316 bits (809), Expect(2) = 3e-88
Identities = 164/209 (78%), Positives = 179/209 (85%)
Frame = +2
Query: 41 QLLRACSQTWKSVRMASTGVERRKPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSR 220
+LL C+ KSVRMAS+ + RR PL NKVALVTASTDGIG AIARRLAQD AHVVVSSR
Sbjct: 5 RLLGLCAWARKSVRMASSRMTRRDPLTNKVALVTASTDGIGFAIARRLAQDRAHVVVSSR 64
Query: 221 KQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFG 400
KQ+NVD+ VATLQGEGLSVTGTVCHVGKAEDRERLVAMAV LHGG+DILVSNAAVNPFFG
Sbjct: 65 KQQNVDQAVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVKLHGGIDILVSNAAVNPFFG 124
Query: 401 NIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGYREGGSVLIVSSVGAYHPFPNLGP 580
+++D TEEVWDK L +NVKA LMTKAVVPEMEKRG GGSV+IVSS+ A+ P P P
Sbjct: 125 SLMDVTEEVWDKTLDINVKAPALMTKAVVPEMEKRG---GGSVVIVSSIAAFSPSPGFSP 181
Query: 581 YNVSKTALLGLTKNLAVELAPRNIRVNCL 667
YNVSKTALLGL LA+ELAPRNIRVNCL
Sbjct: 182 YNVSKTALLGLNNTLAIELAPRNIRVNCL 210
Score = 28.9 bits (63), Expect(2) = 3e-88
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +3
Query: 672 LDSSRLTSARCCGWIRQER 728
LD SRL SA C GW R++R
Sbjct: 212 LDLSRLASAGCSGWTRKKR 230
>ref|NP_005785.1| dehydrogenase/reductase SDR family member 2 isoform 2 [Homo
sapiens].
Length = 280
Score = 301 bits (772), Expect = 5e-82
Identities = 153/251 (60%), Positives = 197/251 (78%)
Frame = +2
Query: 74 SVRMASTGVERRKPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVAT 253
SVRM+STG++R+ L N+VA+VT ST GIG AIARRLA+DGAHVV+SSRKQ+NVDR +A
Sbjct: 20 SVRMSSTGIDRKGVLANRVAVVTGSTSGIGFAIARRLARDGAHVVISSRKQQNVDRAMAK 79
Query: 254 LQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWD 433
LQGEGLSV G VCHVGKAEDRE+LVA A+ GGVD LV +A VNP G+ + +E++WD
Sbjct: 80 LQGEGLSVAGIVCHVGKAEDREQLVAKALEHCGGVDFLVCSAGVNPLVGSTLGTSEQIWD 139
Query: 434 KILHVNVKATVLMTKAVVPEMEKRGYREGGSVLIVSSVGAYHPFPNLGPYNVSKTALLGL 613
KIL VNVK+ L+ ++P ME R G+V++VSS+ AY+P LG YNVSKTALLGL
Sbjct: 140 KILSVNVKSPALLLSQLLPYMENR----RGAVILVSSIAAYNPVVALGVYNVSKTALLGL 195
Query: 614 TKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKESLRIRRLGNPEDCAGIV 793
T+ LA+ELAP++IRVNC+ PG+IKT+FS+V +++ + KE +++R+G EDCAGIV
Sbjct: 196 TRTLALELAPKDIRVNCVVPGIIKTDFSKVFHGNESLWKNFKEHHQLQRIGESEDCAGIV 255
Query: 794 SFLCSEDASYI 826
SFLCS DASY+
Sbjct: 256 SFLCSPDASYV 266
>ref|NP_878912.1| dehydrogenase/reductase SDR family member 2 isoform 1 [Homo
sapiens].
Length = 300
Score = 266 bits (679), Expect(2) = 3e-75
Identities = 142/241 (58%), Positives = 180/241 (74%)
Frame = +2
Query: 74 SVRMASTGVERRKPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVAT 253
SVRM+STG++R+ L N+VA+VT ST GIG AIARRLA+DGAHVV+SSRKQ+NVDR +A
Sbjct: 20 SVRMSSTGIDRKGVLANRVAVVTGSTSGIGFAIARRLARDGAHVVISSRKQQNVDRAMAK 79
Query: 254 LQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWD 433
LQGEGLSV G VCHVGKAEDRE+LVA A+ GGVD LV +A VNP G+ + +E++WD
Sbjct: 80 LQGEGLSVAGIVCHVGKAEDREQLVAKALEHCGGVDFLVCSAGVNPLVGSTLGTSEQIWD 139
Query: 434 KILHVNVKATVLMTKAVVPEMEKRGYREGGSVLIVSSVGAYHPFPNLGPYNVSKTALLGL 613
KIL VNVK+ L+ ++P ME R G+V++VSS+ AY+P LG YNVSKTALLGL
Sbjct: 140 KILSVNVKSPALLLSQLLPYMENR----RGAVILVSSIAAYNPVVALGVYNVSKTALLGL 195
Query: 614 TKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKESLRIRRLGNPEDCAGIV 793
T+ LA+ELAP++IRVNC+ PG+IKT+FS+V+ R +M SL R N C G+
Sbjct: 196 TRTLALELAPKDIRVNCVVPGIIKTDFSKVV-----RIGFMGMSLSGRTSRNIISCRGLG 250
Query: 794 S 796
S
Sbjct: 251 S 251
Score = 35.8 bits (81), Expect(2) = 3e-75
Identities = 18/30 (60%), Positives = 20/30 (66%)
Frame = +3
Query: 771 QRTVRASCLSYALKMPATSLGRQW*WVEGP 860
QRTV+ SC S AL+MPATS GR W P
Sbjct: 252 QRTVQESCPSCALQMPATSTGRTLRWQATP 281
>ref|NP_001180564.1| dehydrogenase/reductase SDR family member 4-like 2 isoform 2 [Homo
sapiens].
Length = 170
Score = 193 bits (491), Expect(2) = 1e-51
Identities = 110/170 (64%), Positives = 117/170 (68%)
Frame = +2
Query: 158 IGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMA 337
IG AIARRLAQD AHVVVSSRKQ+NVD+ VATLQGEGLSVTGTVCHVGKAEDRERLVAM
Sbjct: 16 IGFAIARRLAQDRAHVVVSSRKQQNVDQAVATLQGEGLSVTGTVCHVGKAEDRERLVAMT 75
Query: 338 VNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGYRE 517
L +NVKA LMTKAVVPEMEKRG
Sbjct: 76 ----------------------------------LDINVKAPALMTKAVVPEMEKRG--- 98
Query: 518 GGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTKNLAVELAPRNIRVNCL 667
GGSV+IVSS+ A+ P P PYNVSKTALLGL LA+ELAPRNIRVNCL
Sbjct: 99 GGSVVIVSSIAAFSPSPGFSPYNVSKTALLGLNNTLAIELAPRNIRVNCL 148
Score = 28.9 bits (63), Expect(2) = 1e-51
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +3
Query: 672 LDSSRLTSARCCGWIRQER 728
LD SRL SA C GW R++R
Sbjct: 150 LDLSRLASAGCSGWTRKKR 168
>ref|NP_001180565.1| dehydrogenase/reductase SDR family member 4-like 2 isoform 3 [Homo
sapiens].
Length = 131
Score = 171 bits (432), Expect(2) = 9e-45
Identities = 85/112 (75%), Positives = 94/112 (83%)
Frame = +2
Query: 332 MAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGY 511
MAV LHGG+DILVSNAAVNPFFG+++D TEEVWDK L +NVKA LMTKAVVPEMEKRG
Sbjct: 1 MAVKLHGGIDILVSNAAVNPFFGSLMDVTEEVWDKTLDINVKAPALMTKAVVPEMEKRG- 59
Query: 512 REGGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTKNLAVELAPRNIRVNCL 667
GGSV+IVSS+ A+ P P PYNVSKTALLGL LA+ELAPRNIRVNCL
Sbjct: 60 --GGSVVIVSSIAAFSPSPGFSPYNVSKTALLGLNNTLAIELAPRNIRVNCL 109
Score = 28.9 bits (63), Expect(2) = 9e-45
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +3
Query: 672 LDSSRLTSARCCGWIRQER 728
LD SRL SA C GW R++R
Sbjct: 111 LDLSRLASAGCSGWTRKKR 129
>ref|NP_060911.2| peroxisomal trans-2-enoyl-CoA reductase [Homo sapiens].
Length = 303
Score = 97.8 bits (242), Expect = 2e-20
Identities = 74/248 (29%), Positives = 119/248 (47%), Gaps = 11/248 (4%)
Frame = +2
Query: 116 LENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQG-----EGLSVT 280
L+ +VA+VT GIG AI + L + G++VV++SRK E + LQ + V
Sbjct: 16 LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVI 75
Query: 281 GTVCHVGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEV----WDKILHV 448
C++ E+ LV ++ G ++ LV+N G + E + W +L
Sbjct: 76 PIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGG-----GQFLSPAEHISSKGWHAVLET 130
Query: 449 NVKATVLMTKAVVPEMEKRGYREGGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTKNLA 628
N+ T M KAV K GGS++ + V FP ++ + LTK+LA
Sbjct: 131 NLTGTFYMCKAVYSSWMKE---HGGSIVNII-VPTKAGFPLAVHSGAARAGVYNLTKSLA 186
Query: 629 VELAPRNIRVNCLAPGLI--KTNFSQVLWMDKARKEYMKESLRIRRLGNPEDCAGIVSFL 802
+E A IR+NC+APG+I +T ++ E + + +R+G PE+ + +V FL
Sbjct: 187 LEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVSSVVCFL 246
Query: 803 CSEDASYI 826
S AS+I
Sbjct: 247 LSPAASFI 254
>ref|NP_055049.1| estradiol 17-beta-dehydrogenase 8 [Homo sapiens].
Length = 261
Score = 97.4 bits (241), Expect = 2e-20
Identities = 75/244 (30%), Positives = 113/244 (46%), Gaps = 7/244 (2%)
Frame = +2
Query: 116 LENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSV------ 277
L + +ALVT + GIG A++ RLA +GA V + TV L G G
Sbjct: 9 LRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGN 68
Query: 278 -TGTVCHVGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNV 454
V +A L+ +V + A ++ +E+ WDK++ VN+
Sbjct: 69 HAAFQADVSEARAARCLLEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNL 128
Query: 455 KATVLMTKAVVPEMEKRGYREGGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTKNLAVE 634
K T L+T+A + G R GS++ +SS+ Y SK ++GLT+ A E
Sbjct: 129 KGTFLVTQAAAQALVSNGCR--GSIINISSIVGKVGNVGQTNYAASKAGVIGLTQTAARE 186
Query: 635 LAPRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKESLRIRRLGNPEDCAGIVSFLCSED 814
L IR N + PG I T +Q + K + E + + LG+PED A +V+FL SED
Sbjct: 187 LGRHGIRCNSVLPGFIATPMTQKVPQKVVDK--ITEMIPMGHLGDPEDVADVVAFLASED 244
Query: 815 ASYI 826
+ YI
Sbjct: 245 SGYI 248
>ref|NP_057370.1| L-xylulose reductase isoform 1 [Homo sapiens].
Length = 244
Score = 94.4 bits (233), Expect = 2e-19
Identities = 73/235 (31%), Positives = 113/235 (48%), Gaps = 3/235 (1%)
Frame = +2
Query: 116 LENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCH 295
L + LVT + GIG + L GA VV SR Q ++D V G +
Sbjct: 5 LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPG----IEPVCVD 60
Query: 296 VGKAEDRERLVAMAVNLHGGVDILVSNAAV---NPFFGNIIDATEEVWDKILHVNVKATV 466
+G E ER A+ G VD+LV+NAAV PF ++ T+E +D+ VN++A +
Sbjct: 61 LGDWEATER----ALGSVGPVDLLVNNAAVALLQPF----LEVTKEAFDRSFEVNLRAVI 112
Query: 467 LMTKAVVPEMEKRGYREGGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTKNLAVELAPR 646
+++ V + RG G+++ VSS + N Y +K AL LTK +A+EL P
Sbjct: 113 QVSQIVARGLIARGVP--GAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELGPH 170
Query: 647 NIRVNCLAPGLIKTNFSQVLWMDKARKEYMKESLRIRRLGNPEDCAGIVSFLCSE 811
IRVN + P ++ T+ Q W D + + M + + + E + FL S+
Sbjct: 171 KIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLLSD 225
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 48,009,829
Number of extensions: 1414424
Number of successful extensions: 6238
Number of sequences better than 1.0e-05: 59
Number of HSP's gapped: 6117
Number of HSP's successfully gapped: 66
Length of query: 367
Length of database: 18,297,164
Length adjustment: 104
Effective length of query: 263
Effective length of database: 14,868,908
Effective search space: 3910522804
Effective search space used: 3910522804
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-001685
(1102 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001033027.2| dehydrogenase/reductase SDR family member 4 ... 407 e-114
Alignment gi|NP_082066.2| dehydrogenase/reductase member 2 [Mus musculus]. 280 1e-75
Alignment gi|NP_109611.1| dehydrogenase/reductase SDR family member 4 iso... 262 4e-70
Alignment gi|NP_076012.3| peroxisomal trans-2-enoyl-CoA reductase [Mus mu... 108 1e-23
Alignment gi|NP_031647.1| carbonyl reductase [NADPH] 2 [Mus musculus]. 94 1e-19
Alignment gi|NP_038571.2| estradiol 17-beta-dehydrogenase 8 [Mus musculus]. 94 2e-19
Alignment gi|NP_808232.2| dehydrogenase/reductase SDR family member 11 pr... 92 7e-19
Alignment gi|NP_663570.2| carbonyl reductase family member 4 [Mus musculu... 91 2e-18
Alignment gi|NP_080704.2| L-xylulose reductase [Mus musculus]. 90 4e-18
Alignment gi|NP_001165526.1| 3-hydroxybutyrate dehydrogenase type 2 isofo... 89 8e-18
>ref|NP_001033027.2| dehydrogenase/reductase SDR family member 4 isoform 1 [Mus
musculus].
Length = 279
Score = 407 bits (1046), Expect = e-114
Identities = 206/282 (73%), Positives = 234/282 (82%)
Frame = +2
Query: 26 MRAAGQLLRACSQTWKSVRMASTGVERRKPLENKVALVTASTDGIGLAIARRLAQDGAHV 205
M+ AG+LL +Q W SVRMAS+G+ RR PL NKVALVTASTDGIG AIARRLA+DGAHV
Sbjct: 1 MQKAGRLLGGWTQAWMSVRMASSGLTRRNPLSNKVALVTASTDGIGFAIARRLAEDGAHV 60
Query: 206 VVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHGGVDILVSNAAV 385
VVSSRKQ+NVDR VATLQGEGLSVTG VCHVGKAEDRE+L+ A+ H G+DILVSNAAV
Sbjct: 61 VVSSRKQQNVDRAVATLQGEGLSVTGIVCHVGKAEDREKLITTALKRHQGIDILVSNAAV 120
Query: 386 NPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGYREGGSVLIVSSVGAYHPF 565
NPFFGN++D TEEVWDK+L +NV AT +M KAVVPEMEKRG GGSV+IV SV + F
Sbjct: 121 NPFFGNLMDVTEEVWDKVLSINVTATAMMIKAVVPEMEKRG---GGSVVIVGSVAGFTRF 177
Query: 566 PNLGPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKES 745
P+LGPYNVSKTALLGLTKN A ELAP+NIRVNCLAPGLIKT FS VLW +KAR++++KE+
Sbjct: 178 PSLGPYNVSKTALLGLTKNFAAELAPKNIRVNCLAPGLIKTRFSSVLWEEKAREDFIKEA 237
Query: 746 LRIRRLGNPEDCAGIVSFLCSEDASYIXXXXXXXXXXXASRL 871
++IRRLG PEDCAGIVSFLCSEDASYI SRL
Sbjct: 238 MQIRRLGKPEDCAGIVSFLCSEDASYINGETVVVGGGTPSRL 279
>ref|NP_082066.2| dehydrogenase/reductase member 2 [Mus musculus].
Length = 282
Score = 280 bits (716), Expect = 1e-75
Identities = 149/251 (59%), Positives = 178/251 (70%)
Frame = +2
Query: 74 SVRMASTGVERRKPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVAT 253
S R S + + L KVA++T ST GIG AIARRLAQDGAHVV+SSRKQENVD V
Sbjct: 21 SARRFSKTADENRSLAGKVAVITGSTRGIGFAIARRLAQDGAHVVISSRKQENVDEAVTI 80
Query: 254 LQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWD 433
L+ EGLSVTGT+CHVGKAEDR+ LV A+ GG+D LV A VNP G+ + A+E++WD
Sbjct: 81 LKEEGLSVTGTMCHVGKAEDRQHLVTTALKHSGGIDFLVCVAGVNPLVGSTLGASEQIWD 140
Query: 434 KILHVNVKATVLMTKAVVPEMEKRGYREGGSVLIVSSVGAYHPFPNLGPYNVSKTALLGL 613
KIL VNVK+ L+ V+P ME R GGSV++VSS AY P P LG YN SKTALLGL
Sbjct: 141 KILDVNVKSPALLLSKVLPYMEN---RRGGSVVLVSSGVAYVPVPKLGVYNTSKTALLGL 197
Query: 614 TKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKESLRIRRLGNPEDCAGIV 793
K+LAVELAP+ IRVNCL PG+IKT+FS M + ++RLG PE+CAG+V
Sbjct: 198 CKSLAVELAPKGIRVNCLVPGIIKTDFSLREKTMPNMLPDMNKIFGVKRLGEPEECAGLV 257
Query: 794 SFLCSEDASYI 826
SFLCS DASYI
Sbjct: 258 SFLCSSDASYI 268
>ref|NP_109611.1| dehydrogenase/reductase SDR family member 4 isoform 2 [Mus
musculus].
Length = 216
Score = 262 bits (669), Expect = 4e-70
Identities = 133/181 (73%), Positives = 151/181 (83%)
Frame = +2
Query: 26 MRAAGQLLRACSQTWKSVRMASTGVERRKPLENKVALVTASTDGIGLAIARRLAQDGAHV 205
M+ AG+LL +Q W SVRMAS+G+ RR PL NKVALVTASTDGIG AIARRLA+DGAHV
Sbjct: 1 MQKAGRLLGGWTQAWMSVRMASSGLTRRNPLSNKVALVTASTDGIGFAIARRLAEDGAHV 60
Query: 206 VVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHGGVDILVSNAAV 385
VVSSRKQ+NVDR VATLQGEGLSVTG VCHVGKAEDRE+L+ A+ H G+DILVSNAAV
Sbjct: 61 VVSSRKQQNVDRAVATLQGEGLSVTGIVCHVGKAEDREKLITTALKRHQGIDILVSNAAV 120
Query: 386 NPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGYREGGSVLIVSSVGAYHPF 565
NPFFGN++D TEEVWDK+L +NV AT +M KAVVPEMEKRG GGSV+IV SV + F
Sbjct: 121 NPFFGNLMDVTEEVWDKVLSINVTATAMMIKAVVPEMEKRG---GGSVVIVGSVAGFTRF 177
Query: 566 P 568
P
Sbjct: 178 P 178
>ref|NP_076012.3| peroxisomal trans-2-enoyl-CoA reductase [Mus musculus].
Length = 303
Score = 108 bits (269), Expect = 1e-23
Identities = 74/244 (30%), Positives = 120/244 (49%), Gaps = 7/244 (2%)
Frame = +2
Query: 116 LENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGE-----GLSVT 280
L+N+VA+VT GIG A++R L G +VV++SRK + + V L+ V+
Sbjct: 16 LKNQVAVVTGGGTGIGKAVSRELLHLGCNVVIASRKLDRLTAAVDELRASLPPSSSAEVS 75
Query: 281 GTVCHVGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKA 460
C++ K E+ LV + +G ++ LV+N F + D T + W ++ N+
Sbjct: 76 AIQCNIRKEEEVSNLVKSTLAKYGKINFLVNNGG-GQFMAPVEDITAKGWHAVIETNLTG 134
Query: 461 TVLMTKAVVPEMEKRGYREGGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTKNLAVELA 640
T M K E+ RE G ++ V + FP ++ + LTK++A+ A
Sbjct: 135 TFYMCK----EVYNSWMREHGGSIVNIIVLLNNGFPTAAHTGAAREGVYNLTKSMALAWA 190
Query: 641 PRNIRVNCLAPGLI--KTNFSQVLWMDKARKEYMKESLRIRRLGNPEDCAGIVSFLCSED 814
+R+NC+APG I +T M + E +S+ +RLG PE+ + +V FL S
Sbjct: 191 SSGVRINCVAPGTIYSQTAVDNYGEMGQTLFEMAFDSIPAKRLGVPEEISPLVCFLLSPA 250
Query: 815 ASYI 826
ASYI
Sbjct: 251 ASYI 254
>ref|NP_031647.1| carbonyl reductase [NADPH] 2 [Mus musculus].
Length = 244
Score = 94.4 bits (233), Expect = 1e-19
Identities = 72/230 (31%), Positives = 118/230 (51%), Gaps = 3/230 (1%)
Frame = +2
Query: 131 ALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAE 310
ALVT + GIG + L GA VV +R ++ +L E + +G +
Sbjct: 10 ALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDL----VSLAKECPGIEPVCVDLGDWD 65
Query: 311 DRERLVAMAVNLHGGVDILVSNAAV---NPFFGNIIDATEEVWDKILHVNVKATVLMTKA 481
E+ A+ G VD+LV+NAA+ PF ++ T+E +D+ VN+++ +++
Sbjct: 66 ATEK----ALGGIGPVDLLVNNAALVIMQPF----LEVTKEAFDRSFSVNLRSVFQVSQM 117
Query: 482 VVPEMEKRGYREGGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTKNLAVELAPRNIRVN 661
V +M RG GS++ VSS+ A+ FPNL Y+ +K A+ LTK +A+EL P IRVN
Sbjct: 118 VARDMINRGVP--GSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELGPHKIRVN 175
Query: 662 CLAPGLIKTNFSQVLWMDKARKEYMKESLRIRRLGNPEDCAGIVSFLCSE 811
+ P ++ T+ + + D +KE +R+ ED + FL S+
Sbjct: 176 SVNPTVVLTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSILFLLSD 225
>ref|NP_038571.2| estradiol 17-beta-dehydrogenase 8 [Mus musculus].
Length = 259
Score = 94.0 bits (232), Expect = 2e-19
Identities = 78/247 (31%), Positives = 117/247 (47%), Gaps = 10/247 (4%)
Frame = +2
Query: 116 LENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTV-- 289
L + +ALVT + GIG AI+ RLA +GA V TV L G S G
Sbjct: 7 LRSALALVTGAGSGIGRAISVRLAAEGAAVAACDLDGAAAQDTVRLLGSPG-SEDGAPRG 65
Query: 290 ------CHVGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVN 451
V + RL+ +V + A ++ +EE WD+++ VN
Sbjct: 66 KHAAFQADVSQGPAARRLLEEVQACFSRPPSVVVSCAGITRDEFLLHMSEEDWDRVIAVN 125
Query: 452 VKATVLMTKAVVPEMEKRGYREGGSVLIVSSVGAYHPFPNLGPYNV--SKTALLGLTKNL 625
+K T L+T+A + G R GS++ +SS+ N+G N SK ++GLT+
Sbjct: 126 LKGTFLVTQAAAQALVSSGGR--GSIINISSI--IGKVGNIGQTNYASSKAGVIGLTQTA 181
Query: 626 AVELAPRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKESLRIRRLGNPEDCAGIVSFLC 805
A EL IR N + PG I T +Q M + K+ + + + +G+PED A +V+FL
Sbjct: 182 ARELGRHGIRCNSVLPGFIATPMTQK--MPEKVKDKVTAMIPLGHMGDPEDVADVVAFLA 239
Query: 806 SEDASYI 826
SED+ YI
Sbjct: 240 SEDSGYI 246
>ref|NP_808232.2| dehydrogenase/reductase SDR family member 11 precursor [Mus
musculus].
Length = 260
Score = 92.0 bits (227), Expect = 7e-19
Identities = 78/250 (31%), Positives = 123/250 (49%), Gaps = 8/250 (3%)
Frame = +2
Query: 83 MASTGVERRKPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQG 262
M G+ER + +++ALVT ++ GIG A+AR L Q G VV +R N++ A +
Sbjct: 1 MTRAGMERWR---DRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKS 57
Query: 263 EGLSVTGTV----CHVGKAEDRERLVAMAVNLHGGVDILVSNAAV-NPFFGNIIDATEEV 427
G GT+ C + ED + + + H GVDI ++NA + P ++ +
Sbjct: 58 AG--YPGTLIPYRCDLSNEEDILSMFSAVRSQHSGVDICINNAGMARP--DTLLSGSTSG 113
Query: 428 WDKILHVNVKATVLMTKAVVPEMEKRGYREGGSVLIVSSVG-AYHPFPNLGPYNVSKTAL 604
W + +VNV A + T+ M++R +G + I S G P + Y+ +K A+
Sbjct: 114 WKDMFNVNVLALSICTREAYQSMKERNIDDGHIININSMCGHRVPPQSVIHFYSATKYAV 173
Query: 605 LGLTKNLAVEL--APRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKESLRIRRLGNPED 778
LT+ L EL A +IR C++PGL++T F+ L DK E I+ L PED
Sbjct: 174 TALTEGLRQELLEAQTHIRATCISPGLVETQFAFKL-HDKDPGEAAATYEHIKCL-RPED 231
Query: 779 CAGIVSFLCS 808
A V ++ S
Sbjct: 232 VAEAVIYVLS 241
>ref|NP_663570.2| carbonyl reductase family member 4 [Mus musculus].
Length = 236
Score = 90.5 bits (223), Expect = 2e-18
Identities = 68/227 (29%), Positives = 115/227 (50%)
Frame = +2
Query: 122 NKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVG 301
+KV V + GIG A+A+ +AQ G + + SR E T L G L+ C V
Sbjct: 2 DKVCAVFGGSRGIGRAVAQLMAQKGYRLAIVSRNLEVAKVTAGELGGNHLAFR---CDVA 58
Query: 302 KAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKA 481
K +D + G V+ LV+ A +N + TE++ + LH N+ ++L KA
Sbjct: 59 KEQDVQSTFQEMEKHLGPVNFLVNAAGINRDSLLVRTKTEDMISQ-LHTNLLGSMLTCKA 117
Query: 482 VVPEMEKRGYREGGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTKNLAVELAPRNIRVN 661
+ M ++GGS++ V S+ Y+ +K L+G +++LA E+A + IRVN
Sbjct: 118 AMKTM----IQQGGSIVNVGSIIGLKGNVGQSAYSATKGGLVGFSRSLAKEVARKKIRVN 173
Query: 662 CLAPGLIKTNFSQVLWMDKARKEYMKESLRIRRLGNPEDCAGIVSFL 802
+APG I+T+ ++ L ++E+ K+++ + R G + A V FL
Sbjct: 174 VVAPGFIRTDMTRHL-----KEEHFKKNIPLGRFGETLEVAHAVVFL 215
>ref|NP_080704.2| L-xylulose reductase [Mus musculus].
Length = 244
Score = 89.7 bits (221), Expect = 4e-18
Identities = 73/234 (31%), Positives = 114/234 (48%), Gaps = 3/234 (1%)
Frame = +2
Query: 116 LENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCH 295
L + ALVT + GIG + L GA VV SR +E++D V G V
Sbjct: 5 LAGRRALVTGAGKGIGRSTVLALKAAGAQVVAVSRTREDLDDLVRECPG----VEPVCVD 60
Query: 296 VGKAEDRERLVAMAVNLHGGVDILVSNAAV---NPFFGNIIDATEEVWDKILHVNVKATV 466
+ E E+ A++ G VD+LV+NAAV PF ++ T+E D +VN++A +
Sbjct: 61 LADWEATEQ----ALSNVGPVDLLVNNAAVALLQPF----LEVTKEACDTSFNVNLRAVI 112
Query: 467 LMTKAVVPEMEKRGYREGGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTKNLAVELAPR 646
+++ V M RG G+++ VSS + N Y +K AL LTK +A+EL P
Sbjct: 113 QVSQIVAKGMIARGVP--GAIVNVSSQASQRALTNHTVYCSTKGALDMLTKMMALELGPH 170
Query: 647 NIRVNCLAPGLIKTNFSQVLWMDKARKEYMKESLRIRRLGNPEDCAGIVSFLCS 808
IRVN + P ++ T + W D + + M + + + + E+ + FL S
Sbjct: 171 KIRVNAVNPTVVMTPMGRTNWSDPHKAKAMLDRIPLGKFAEVENVVDTILFLLS 224
>ref|NP_001165526.1| 3-hydroxybutyrate dehydrogenase type 2 isoform 1 [Mus musculus].
Length = 255
Score = 88.6 bits (218), Expect = 8e-18
Identities = 67/244 (27%), Positives = 126/244 (51%), Gaps = 7/244 (2%)
Frame = +2
Query: 116 LENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDR--TVATLQGEGLSVTGTV 289
L+ KV ++TA+ GIG A A A++GA V+ + + + + +Q L VT
Sbjct: 14 LDGKVIVLTAAAQGIGRASALAFAREGAKVIATDINESKLQELESYRGIQTRVLDVT--- 70
Query: 290 CHVGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVL 469
++R + + +D+L N A G I+D E+ WD +++NV++ L
Sbjct: 71 --------KKRQIDQFASEIERIDVLF-NVAGFVHHGTILDCEEKDWDFSMNLNVRSMFL 121
Query: 470 MTKAVVPEMEKRGYREGGSVLIVSSVGA-YHPFPNLGPYNVSKTALLGLTKNLAVELAPR 646
M KA +P+M + + G+++ +SSV + N Y+ +K A++GLTK++A + +
Sbjct: 122 MIKAFLPKMLAQ---KSGNIINMSSVASSIKGVENRCVYSATKAAVIGLTKSVAADFIQQ 178
Query: 647 NIRVNCLAPGLIKT-NFSQVLWMDKARKEYMKESLRIRRLG---NPEDCAGIVSFLCSED 814
IR NC+ PG + T + + + KE +K L ++ G + E+ A + +L S++
Sbjct: 179 GIRCNCVCPGTVDTPSLQERIQARDNPKEALKTFLNRQKTGRFASAEEVALLCVYLASDE 238
Query: 815 ASYI 826
++Y+
Sbjct: 239 SAYV 242
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 40,417,565
Number of extensions: 1169630
Number of successful extensions: 4859
Number of sequences better than 1.0e-05: 43
Number of HSP's gapped: 4760
Number of HSP's successfully gapped: 43
Length of query: 367
Length of database: 15,617,559
Length adjustment: 103
Effective length of query: 264
Effective length of database: 12,523,851
Effective search space: 3306296664
Effective search space used: 3306296664
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-001685
(1102 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_999184.1| dehydrogenase/reductase SDR family member 4 [Su... 478 e-135
Alignment gi|NP_998992.1| carbonyl reductase [NADPH] 2 [Sus scrofa]. 98 7e-21
Alignment gi|XP_001927120.1| PREDICTED: carbonyl reductase family member ... 97 2e-20
Alignment gi|NP_001124202.1| estradiol 17-beta-dehydrogenase 8 [Sus scrof... 94 2e-19
Alignment gi|XP_003357106.1| PREDICTED: 3-hydroxybutyrate dehydrogenase t... 89 6e-18
Alignment gi|XP_003129333.2| PREDICTED: 3-hydroxybutyrate dehydrogenase t... 89 6e-18
Alignment gi|XP_003131752.1| PREDICTED: dehydrogenase/reductase SDR famil... 85 6e-17
Alignment gi|NP_001177161.1| 2,4-dienoyl-CoA reductase, mitochondrial [Su... 81 1e-15
Alignment gi|NP_999413.1| corticosteroid 11-beta-dehydrogenase isozyme 1 ... 80 2e-15
Alignment gi|XP_003123297.1| PREDICTED: LOW QUALITY PROTEIN: retinol dehy... 78 1e-14
>ref|NP_999184.1| dehydrogenase/reductase SDR family member 4 [Sus scrofa].
Length = 260
Score = 478 bits (1230), Expect = e-135
Identities = 249/263 (94%), Positives = 249/263 (94%)
Frame = +2
Query: 83 MASTGVERRKPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQG 262
MASTGVERRKPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQG
Sbjct: 1 MASTGVERRKPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQG 60
Query: 263 EGLSVTGTVCHVGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKIL 442
EGLSVTGTVCHVGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKIL
Sbjct: 61 EGLSVTGTVCHVGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKIL 120
Query: 443 HVNVKATVLMTKAVVPEMEKRGYREGGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTKN 622
HVNVKATVLMTKAVVPEMEKRG GGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTKN
Sbjct: 121 HVNVKATVLMTKAVVPEMEKRG---GGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTKN 177
Query: 623 LAVELAPRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKESLRIRRLGNPEDCAGIVSFL 802
LAVELAPRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKESLRIRRLGNPEDCAGIVSFL
Sbjct: 178 LAVELAPRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKESLRIRRLGNPEDCAGIVSFL 237
Query: 803 CSEDASYIXXXXXXXXXXXASRL 871
CSEDASYI ASRL
Sbjct: 238 CSEDASYITGETVVVGGGTASRL 260
>ref|NP_998992.1| carbonyl reductase [NADPH] 2 [Sus scrofa].
Length = 244
Score = 98.2 bits (243), Expect = 7e-21
Identities = 74/230 (32%), Positives = 119/230 (51%), Gaps = 3/230 (1%)
Frame = +2
Query: 131 ALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAE 310
ALVT + GIG + L GA VV +R ++ +L E + +G E
Sbjct: 10 ALVTGAGKGIGRDTVKALHVSGARVVAVTRTNGDL----VSLSQECPGIEPVCVDLGDWE 65
Query: 311 DRERLVAMAVNLHGGVDILVSNAAV---NPFFGNIIDATEEVWDKILHVNVKATVLMTKA 481
ER A+ G VD+LV+NAAV PF +D T+EV+D+ +VN+++ +++
Sbjct: 66 ATER----ALGGVGPVDLLVNNAAVALMQPF----LDTTKEVFDRSFNVNLRSVFQVSQI 117
Query: 482 VVPEMEKRGYREGGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTKNLAVELAPRNIRVN 661
V M +RG GS++ VSS+ ++ +P L Y+ +K A+ LTK++A+EL P IRVN
Sbjct: 118 VARSMIERGVP--GSIVNVSSMVSHVTYPGLAAYSSTKGAMTMLTKSMAMELGPHKIRVN 175
Query: 662 CLAPGLIKTNFSQVLWMDKARKEYMKESLRIRRLGNPEDCAGIVSFLCSE 811
+ P ++ T + + D +KE +R+ ED + FL S+
Sbjct: 176 SVNPTVVLTAMGRSVTSDPELARKLKERHPMRKFAEVEDVVNSILFLLSD 225
>ref|XP_001927120.1| PREDICTED: carbonyl reductase family member 4-like [Sus scrofa].
Length = 237
Score = 97.1 bits (240), Expect = 2e-20
Identities = 69/227 (30%), Positives = 119/227 (52%)
Frame = +2
Query: 122 NKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVG 301
++V V + GIG A+AR +AQ G + + +R + L G+ L+++ C V
Sbjct: 2 DRVCAVFGGSRGIGRAVARLMAQRGYRLAIVARNLQGARAVAGDLGGDHLALS---CDVA 58
Query: 302 KAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKA 481
K +D + G V+ LV+ A +N + +TE++ + L N+ ++L KA
Sbjct: 59 KEQDVQSTFEEIEKNLGPVNFLVNAAGINRDNLLVRTSTEDMLCQ-LQTNLLGSMLTCKA 117
Query: 482 VVPEMEKRGYREGGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTKNLAVELAPRNIRVN 661
V M K+ +GGS++ + SV P Y+ SK L+G ++ LA E+A + IRVN
Sbjct: 118 AVKTMIKQ---QGGSIVNIGSVVGLKGNPGQSVYSASKGGLVGFSRALAKEVAKKKIRVN 174
Query: 662 CLAPGLIKTNFSQVLWMDKARKEYMKESLRIRRLGNPEDCAGIVSFL 802
+APG + T+ ++ L ++E++K ++ + R G+P D A V FL
Sbjct: 175 VVAPGFVHTDMTKDL-----KEEHLKSNIPLGRFGDPLDVAHAVLFL 216
>ref|NP_001124202.1| estradiol 17-beta-dehydrogenase 8 [Sus scrofa].
Length = 259
Score = 93.6 bits (231), Expect = 2e-19
Identities = 77/246 (31%), Positives = 116/246 (47%), Gaps = 9/246 (3%)
Frame = +2
Query: 116 LENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSV------ 277
L + +ALVT + GIG A++ RLA +GA V TV L G G
Sbjct: 7 LRSALALVTGAGSGIGRAVSVRLAAEGAAVAACDLDGAAAQETVQLLGGPGSEKGAPSGA 66
Query: 278 -TGTVCHVGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNV 454
V +AE RL+ +V + A ++ +E+ WDK++ VN+
Sbjct: 67 HAAFQADVSEAETARRLLEQVQAYFFRPPSVVVSCAGITRDEFLLRMSEDDWDKVIAVNL 126
Query: 455 KATVLMTKAVVPEMEKRGYREGGSVLIVSSVGAYHPFPNLGP--YNVSKTALLGLTKNLA 628
K L+T+A + G GS++ +SS+ N+G Y SK ++GLT+ +A
Sbjct: 127 KGIFLVTQAAAQALVSSGCP--GSIINISSI--IGKVGNMGQTNYAASKAGVIGLTQAVA 182
Query: 629 VELAPRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKESLRIRRLGNPEDCAGIVSFLCS 808
EL IR N + PG IKT +Q + K + + + LG+PED A +V+FL S
Sbjct: 183 RELGRYRIRCNSVLPGFIKTPMAQKVPQKVLDK--VVGMIPMGHLGDPEDVADVVAFLAS 240
Query: 809 EDASYI 826
ED+ YI
Sbjct: 241 EDSGYI 246
>ref|XP_003357106.1| PREDICTED: 3-hydroxybutyrate dehydrogenase type 2-like isoform 2
[Sus scrofa].
Length = 245
Score = 88.6 bits (218), Expect = 6e-18
Identities = 70/245 (28%), Positives = 122/245 (49%), Gaps = 8/245 (3%)
Frame = +2
Query: 116 LENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDR--TVATLQGEGLSVTGTV 289
L+ KV ++TA+ GIG A A A++GA V+ + + + +Q L VT
Sbjct: 4 LDGKVIILTAAAQGIGRAAALAFAREGAKVIATDINESKLQELENYPGIQTRVLDVTKKK 63
Query: 290 CHVGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVL 469
A D ERL D+L N A G I+D E+ WD +++NV++ L
Sbjct: 64 QIDEFANDIERL-----------DVLF-NVAGFVHHGTILDCEEKDWDFSMNLNVRSMYL 111
Query: 470 MTKAVVPEMEKRGYREGGSVLIVSSVGA-YHPFPNLGPYNVSKTALLGLTKNLAVELAPR 646
M KA +P+M + + G+++ +SSV + N Y+ +K A++GLTK++A + +
Sbjct: 112 MIKAFLPKMLAQ---KSGNIINMSSVASSIKGVVNRCVYSATKAAVIGLTKSVAADFIQQ 168
Query: 647 NIRVNCLAPGLIKTNFSQVLWM-----DKARKEYMKESLRIRRLGNPEDCAGIVSFLCSE 811
IR NC+ PG + T Q ++A +++K + R E+ A + +L S+
Sbjct: 169 GIRCNCVCPGTVDTPSLQERIQARPNPEEALSDFLKRQ-KTGRFATAEEVALLCVYLASD 227
Query: 812 DASYI 826
+++Y+
Sbjct: 228 ESAYV 232
>ref|XP_003129333.2| PREDICTED: 3-hydroxybutyrate dehydrogenase type 2-like isoform 1
[Sus scrofa].
Length = 245
Score = 88.6 bits (218), Expect = 6e-18
Identities = 70/245 (28%), Positives = 122/245 (49%), Gaps = 8/245 (3%)
Frame = +2
Query: 116 LENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDR--TVATLQGEGLSVTGTV 289
L+ KV ++TA+ GIG A A A++GA V+ + + + +Q L VT
Sbjct: 4 LDGKVIILTAAAQGIGRAAALAFAREGAKVIATDINESKLQELENYPGIQTRVLDVTKKK 63
Query: 290 CHVGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVL 469
A D ERL D+L N A G I+D E+ WD +++NV++ L
Sbjct: 64 QIDEFANDIERL-----------DVLF-NVAGFVHHGTILDCEEKDWDFSMNLNVRSMYL 111
Query: 470 MTKAVVPEMEKRGYREGGSVLIVSSVGA-YHPFPNLGPYNVSKTALLGLTKNLAVELAPR 646
M KA +P+M + + G+++ +SSV + N Y+ +K A++GLTK++A + +
Sbjct: 112 MIKAFLPKMLAQ---KSGNIINMSSVASSIKGVVNRCVYSATKAAVIGLTKSVAADFIQQ 168
Query: 647 NIRVNCLAPGLIKTNFSQVLWM-----DKARKEYMKESLRIRRLGNPEDCAGIVSFLCSE 811
IR NC+ PG + T Q ++A +++K + R E+ A + +L S+
Sbjct: 169 GIRCNCVCPGTVDTPSLQERIQARPNPEEALSDFLKRQ-KTGRFATAEEVALLCVYLASD 227
Query: 812 DASYI 826
+++Y+
Sbjct: 228 ESAYV 232
>ref|XP_003131752.1| PREDICTED: dehydrogenase/reductase SDR family member 11-like [Sus
scrofa].
Length = 330
Score = 85.1 bits (209), Expect = 6e-17
Identities = 62/210 (29%), Positives = 108/210 (51%), Gaps = 9/210 (4%)
Frame = +2
Query: 95 GVERRKPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLS 274
G+ER + ++ALVT ++ GIG A+AR L Q G VV +R N++ A + G
Sbjct: 75 GMERWR---GRLALVTGASGGIGAAVARALVQHGLKVVGCARTVGNIEELAAECKSAG-- 129
Query: 275 VTGTV----CHVGKAEDRERLVAMAVNLHGGVDILVSNAAV-NPFFGNIIDATEEVWDKI 439
GT+ C + ED + + + H GVDI ++NA + P +++ + W +
Sbjct: 130 YPGTLIPYKCDLSNEEDILSMFSAIRSQHSGVDICINNAGLARP--DSLLSGSTSGWKDM 187
Query: 440 LHVNVKATVLMTKAVVPEMEKRGYREGGSVLIVSSVGAYHPFPNLGP--YNVSKTALLGL 613
+VNV A + T+ M +R + G ++ ++S+ + P Y+ +K A+ L
Sbjct: 188 FNVNVLALSICTREAYQSMRERKV-DDGHIININSMSGHRVVPQSVAHFYSATKYAVTAL 246
Query: 614 TKNLAVEL--APRNIRVNCLAPGLIKTNFS 697
T+ L EL A +IR C++PG+++T F+
Sbjct: 247 TEGLRQELREAQTHIRATCISPGVVETQFA 276
>ref|NP_001177161.1| 2,4-dienoyl-CoA reductase, mitochondrial [Sus scrofa].
Length = 328
Score = 80.9 bits (198), Expect = 1e-15
Identities = 71/247 (28%), Positives = 122/247 (49%), Gaps = 11/247 (4%)
Frame = +2
Query: 119 ENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHV 298
+ K+A +T GIG + L+ GA V++SR N+D AT + E S TG H
Sbjct: 51 QGKLAFITGGGTGIGKRMTTHLSSLGAQCVIASR---NIDILKATAE-EISSQTGNKVHA 106
Query: 299 GKAEDRE-----RLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEV----WDKILHVN 451
+ + R+ V+ + + G DI+++NAA GN I +E + W I +
Sbjct: 107 IQCDVRDPNMVQNTVSELIKVIGHPDIVINNAA-----GNFISPSERLSPNAWKTITDIV 161
Query: 452 VKATVLMTKAVVPEMEKRGYREGGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTKNLAV 631
+ T +T + ++ K ++G + L ++++ A + P +K + ++K+LA
Sbjct: 162 LNGTAFVTLEIGKQLIKA--QKGAAFLAITTIYAETGSGFVVPSASAKAGVEAMSKSLAA 219
Query: 632 ELAPRNIRVNCLAPGLIKTN--FSQVLWMDKARKEYMKESLRIRRLGNPEDCAGIVSFLC 805
E + +R N + PG IKT FS++ KE M + + RLG E+ A + +FLC
Sbjct: 220 EWSKYGMRFNVIQPGPIKTKGAFSRLDPTGAFEKE-MIDRIPCGRLGTVEELANLATFLC 278
Query: 806 SEDASYI 826
S+ AS+I
Sbjct: 279 SDYASWI 285
>ref|NP_999413.1| corticosteroid 11-beta-dehydrogenase isozyme 1 [Sus scrofa].
Length = 292
Score = 80.5 bits (197), Expect = 2e-15
Identities = 63/201 (31%), Positives = 102/201 (50%), Gaps = 5/201 (2%)
Frame = +2
Query: 104 RRKPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTG 283
R + L K +VT ++ GIG +A LA+ GAHVVV++R +E + + V+ G S
Sbjct: 28 RPEMLRGKKVIVTGASKGIGREMAYHLARMGAHVVVTARSEETLKKVVSHSLELGASSAH 87
Query: 284 TVCHVGKAED---RERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNV 454
V G ED E+ VA A L GG+D+L+ N F ++ D V + + VN
Sbjct: 88 YV--AGTMEDMTFAEQFVAKAGKLLGGLDMLILNHITQAFMTSVYDDIHLV-RRSMEVNF 144
Query: 455 KATVLMTKAVVPEMEKRGYREGGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTKNLAVE 634
+ V+++ A +P ++ + GS+++VSS P + PY+ SK AL G ++ E
Sbjct: 145 LSYVVLSVAALPMLK----QSNGSIVVVSSQAGKMANPLVAPYSASKFALDGFFSSITKE 200
Query: 635 --LAPRNIRVNCLAPGLIKTN 691
+ N+ + GLI T+
Sbjct: 201 YSVTKVNVSITLCILGLIDTD 221
>ref|XP_003123297.1| PREDICTED: LOW QUALITY PROTEIN: retinol dehydrogenase 8-like [Sus
scrofa].
Length = 332
Score = 77.8 bits (190), Expect = 1e-14
Identities = 66/227 (29%), Positives = 105/227 (46%), Gaps = 5/227 (2%)
Frame = +2
Query: 68 WKSVRMASTGVERRKPLENKVALVTASTDGIGLAIARRLAQDGA--HVVVSSRKQENVDR 241
W+ MA T + L++ + GIGL +A +LA+D + VV++ +
Sbjct: 16 WEGXNMADTP---------RTVLISGCSSGIGLELAVQLARDPKQRYHVVATMRDLGKKG 66
Query: 242 TVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHGGVDILVSNAAVN---PFFGNIID 412
T+ GE L T TV + D ++ G VD+LV+NA V P G +
Sbjct: 67 TLEAAAGEALGQTLTVAQLDVCSDESVAQCLSCIQGGEVDVLVNNAGVGLVGPLEGLSLA 126
Query: 413 ATEEVWDKILHVNVKATVLMTKAVVPEMEKRGYREGGSVLIVSSVGAYHPFPNLGPYNVS 592
A + V+D N V + KAV+P M++R G +++VSSV Y S
Sbjct: 127 AMQNVFD----TNFFGAVRLVKAVLPGMKRR---RQGHIVVVSSVMGLQGVVFNEVYAAS 179
Query: 593 KTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWMDKARKEY 733
K A+ G ++LAV+L NI ++ + PG + T F + L + E+
Sbjct: 180 KFAIEGFFESLAVQLLQFNIFISLVEPGPVATEFERKLLEQVSTAEF 226
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 30,348,326
Number of extensions: 908127
Number of successful extensions: 4147
Number of sequences better than 1.0e-05: 31
Number of HSP's gapped: 4082
Number of HSP's successfully gapped: 31
Length of query: 367
Length of database: 11,343,932
Length adjustment: 100
Effective length of query: 267
Effective length of database: 8,854,232
Effective search space: 2364079944
Effective search space used: 2364079944
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-001685
(1102 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr07 577 e-162
>Sscrofa_Chr07
|| Length = 134764511
Score = 577 bits (291), Expect = e-162
Identities = 325/339 (95%), Gaps = 1/339 (0%)
Strand = Plus / Minus
Query: 758 aggttaggcaatccagaggactgtgcgggcatcgtgtctttcctatgctctgaagatgcc 817
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80512769 aggttaggcaatccagaggactgtgcgggcatcgtgtctttcctatgctctgaagatgcc 80512710
Query: 818 agctacatcactggggagacagtggtagtgggtggagggaccgcatcccgcctctgagga 877
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80512709 agctacatcactggggagacagtggtagtgggtggagggaccgcatcccgcctctgagga 80512650
Query: 878 cctggagagcatccaccagggcagagattgggctccagctcctgttccagcattcatcaa 937
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80512649 cctggagagcatccaccagggcagagattgggctccagctcctgttccagcattcatcaa 80512590
Query: 938 ctggtttcccacctctgcctagcattctgctcacaatacaccataaacccctannnnnnn 997
|||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 80512589 ctggtttcccacctctgcctagcattctgctcacaatacaccat-aacccctacccaccc 80512531
Query: 998 nnnnnaaatcagttctgccctgtgaaaaaagccagcgtccttgtcctctgctgtcaagct 1057
||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 80512530 cccccaaatcagttctgccctgtgaaaagagccagcgtccttgtcctctgctgtcaagct 80512471
Query: 1058 gtggtctaatgaggattttccctgttgctgtagccttca 1096
|||||||||||||||||||||||||||||||||||||||
Sbjct: 80512470 gtggtctaatgaggattttccctgttgctgtagccttca 80512432
Score = 357 bits (180), Expect = 8e-96
Identities = 180/180 (100%)
Strand = Plus / Minus
Query: 156 ggatcggcctcgccatcgcccggcgtctggcccaggatggggcccacgtggtggtcagca 215
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80524165 ggatcggcctcgccatcgcccggcgtctggcccaggatggggcccacgtggtggtcagca 80524106
Query: 216 gccggaagcaggagaatgtggaccggacagtggcaacactgcagggggaggggctgagcg 275
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80524105 gccggaagcaggagaatgtggaccggacagtggcaacactgcagggggaggggctgagcg 80524046
Query: 276 tgacgggcaccgtgtgccacgtggggaaggccgaggaccgggagcgactggtggccatgg 335
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80524045 tgacgggcaccgtgtgccacgtggggaaggccgaggaccgggagcgactggtggccatgg 80523986
Score = 268 bits (135), Expect = 6e-69
Identities = 135/135 (100%)
Strand = Plus / Minus
Query: 569 aatctgggcccttacaatgttagtaaaacagccttgctgggcctcaccaagaacctggcc 628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80515521 aatctgggcccttacaatgttagtaaaacagccttgctgggcctcaccaagaacctggcc 80515462
Query: 629 gtagagctggccccaaggaacattagggtgaactgcctggcgcctggactcatcaagact 688
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80515461 gtagagctggccccaaggaacattagggtgaactgcctggcgcctggactcatcaagact 80515402
Query: 689 aacttcagccaggtg 703
|||||||||||||||
Sbjct: 80515401 aacttcagccaggtg 80515387
Score = 262 bits (132), Expect = 4e-67
Identities = 142/144 (98%), Gaps = 1/144 (0%)
Strand = Plus / Minus
Query: 15 ctggtctgca-catgcgggcggcggggcagttactgagggcctgttcccagacgtggaag 73
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80525730 ctggtctgcaacatgcgggcggcggggcagttactgagggcctgttcccagacgtggaag 80525671
Query: 74 tcggtgcggatggccagcaccggggtggagcgccgaaaaccgctggagaataaggtggca 133
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 80525670 tcggtgcggatggccagcaccggggtggagcgccgaaaaccgctcgagaataaggtggca 80525611
Query: 134 ctagtaacagcctccactgacggg 157
||||||||||||||||||||||||
Sbjct: 80525610 ctagtaacagcctccactgacggg 80525587
Score = 204 bits (103), Expect = 7e-50
Identities = 103/103 (100%)
Strand = Plus / Minus
Query: 334 ggctgtgaaccttcacgggggcgtggacatcctggtctccaatgcagccgtcaacccatt 393
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80518721 ggctgtgaaccttcacgggggcgtggacatcctggtctccaatgcagccgtcaacccatt 80518662
Query: 394 ctttggaaacatcatagatgccactgaggaggtgtgggacaag 436
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80518661 ctttggaaacatcatagatgccactgaggaggtgtgggacaag 80518619
Score = 163 bits (82), Expect = 3e-37
Identities = 82/82 (100%)
Strand = Plus / Minus
Query: 435 agattctgcacgttaacgtgaaggccacagtcctgatgacaaaggcagtggtgccggaga 494
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80516273 agattctgcacgttaacgtgaaggccacagtcctgatgacaaaggcagtggtgccggaga 80516214
Query: 495 tggagaaacgagggtacagaga 516
||||||||||||||||||||||
Sbjct: 80516213 tggagaaacgagggtacagaga 80516192
Score = 139 bits (70), Expect = 4e-30
Identities = 134/154 (87%), Gaps = 1/154 (0%)
Strand = Plus / Minus
Query: 180 gtctggcccaggatggggcccacgtggtggtcagcagcc-ggaagcaggagaatgtggac 238
|||||||||| ||||| ||||| ||| ||||||||||| |||||||| |||||||||||
Sbjct: 80618622 gtctggcccaagatggagcccatatggcggtcagcagccaggaagcagcagaatgtggac 80618563
Query: 239 cggacagtggcaacactgcagggggaggggctgagcgtgacgggcaccgtgtgccacgtg 298
| | ||||||||| |||||||||||||||||||||||||| ||| ||||||||| ||
Sbjct: 80618562 caggcagtggcaatgctgcagggggaggggctgagcgtgacaagcagggtgtgccacctg 80618503
Query: 299 gggaaggccgaggaccgggagcgactggtggcca 332
||||||| | |||||| |||||| ||||||||||
Sbjct: 80618502 gggaaggtcaaggaccaggagcggctggtggcca 80618469
Score = 117 bits (59), Expect = 1e-23
Identities = 59/59 (100%)
Strand = Plus / Minus
Query: 703 gttgtggatggataaggcaagaaaggagtacatgaaagaaagcttgcgaatcagaaggt 761
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80514946 gttgtggatggataaggcaagaaaggagtacatgaaagaaagcttgcgaatcagaaggt 80514888
Score = 95.6 bits (48), Expect = 5e-17
Identities = 51/52 (98%)
Strand = Plus / Minus
Query: 517 aggcggctcagtgttgatcgtgtcctccgttggagcctaccacccatttccc 568
||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 80515845 aggcggctcagtgttgatcgtatcctccgttggagcctaccacccatttccc 80515794
Score = 61.9 bits (31), Expect = 7e-07
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 180 gtctggcccaggatggggcccacgtggtggtcagcagcc 218
|||||||||||||||||||||||| || |||||||||||
Sbjct: 80812246 gtctggcccaggatggggcccacgcggaggtcagcagcc 80812208
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 28,827,166
Number of extensions: 174
Number of successful extensions: 174
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 173
Number of HSP's successfully gapped: 11
Length of query: 1102
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 1081
Effective length of database: 2,808,413,156
Effective search space: 3035894621636
Effective search space used: 3035894621636
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)