Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-001857
(1298 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001029609.1| carbonic anhydrase 3 [Bos taurus]. 524 e-149
Alignment gi|XP_002692875.1| PREDICTED: carbonic anhydrase XIII [Bos taur... 332 6e-91
Alignment gi|NP_848667.1| carbonic anhydrase 2 [Bos taurus]. 317 1e-86
Alignment gi|NP_001068934.1| carbonic anhydrase 1 [Bos taurus]. 310 2e-84
Alignment gi|XP_002692874.1| PREDICTED: carbonic anhydrase 1-like [Bos ta... 307 1e-83
Alignment gi|XP_001250684.1| PREDICTED: carbonic anhydrase 1-like [Bos ta... 307 1e-83
Alignment gi|NP_001179451.1| carbonic anhydrase 7 [Bos taurus]. 289 4e-78
Alignment gi|XP_002694851.1| PREDICTED: carbonic anhydrase VII-like [Bos ... 289 4e-78
Alignment gi|NP_001074377.2| carbonic anhydrase 5B, mitochondrial [Bos ta... 241 1e-63
Alignment gi|NP_001179338.1| carbonic anhydrase 5A, mitochondrial [Bos ta... 227 2e-59
>ref|NP_001029609.1| carbonic anhydrase 3 [Bos taurus].
Length = 260
Score = 524 bits (1350), Expect = e-149
Identities = 241/260 (92%), Positives = 252/260 (96%)
Frame = +2
Query: 50 MAKEWGYAAHNGPDHWHELYPIAKGDNQSPIELHTKDIKHDPSLLPWTASYDPGSAKTIL 229
MAKEWGYA HNGPDHWHEL+P AKG+NQSPIEL+TK+I HDPSL PWTASYDPGSAKTIL
Sbjct: 1 MAKEWGYADHNGPDHWHELFPNAKGENQSPIELNTKEISHDPSLKPWTASYDPGSAKTIL 60
Query: 230 NNGKTCRVVFDDTYDRSMLRGGPLTAAYRLRQFHLHWGSSDDHGSEHTVDGVKYAAELHL 409
NNGKTCRVVFDDTYDRSMLRGGPL A YRLRQFHLHWGSSDDHGSEH+VDGVKYAAELHL
Sbjct: 61 NNGKTCRVVFDDTYDRSMLRGGPLAAPYRLRQFHLHWGSSDDHGSEHSVDGVKYAAELHL 120
Query: 410 VHWNSKYNSFATALKHPDGVAVVGIFLKIGREKGEFQLVLDALDKIKTKGKEAPFTNFNP 589
VHWNSKYNS+ATALKH DG+AVVG+FLKIGREKGEFQL+LDALDKIKTKGKEAPF NFNP
Sbjct: 121 VHWNSKYNSYATALKHADGIAVVGVFLKIGREKGEFQLLLDALDKIKTKGKEAPFNNFNP 180
Query: 590 SCLFPACRDYWTYHGSFTTPPCEECIVWLLLKEPITVSSDQMAKLRSLYSSAENEPPVPL 769
SCLFPACRDYWTYHGSFTTPPCEECIVWLLLKEPITVSSDQ+AKLR+LYSSAENEPPVPL
Sbjct: 181 SCLFPACRDYWTYHGSFTTPPCEECIVWLLLKEPITVSSDQIAKLRTLYSSAENEPPVPL 240
Query: 770 VRNWRPPQPIKGRIVKASFK 829
VRNWRPPQPIKGRIVKASFK
Sbjct: 241 VRNWRPPQPIKGRIVKASFK 260
>ref|XP_002692875.1| PREDICTED: carbonic anhydrase XIII [Bos taurus].
Length = 262
Score = 332 bits (850), Expect = 6e-91
Identities = 154/257 (59%), Positives = 188/257 (73%), Gaps = 1/257 (0%)
Frame = +2
Query: 62 WGYAAHNGPDHWHELYPIAKGDNQSPIELHTKDIKHDPSLLPWTASYDPGSAKTILNNGK 241
WGY +GP HW+E +PIA GD QSPIE+ TK++++D SL P YD SAK I N+G
Sbjct: 6 WGYGERDGPVHWNEFFPIADGDQQSPIEIKTKEVRYDSSLRPLGIKYDASSAKIISNSGH 65
Query: 242 TCRVVFDDTYDRSMLRGGPLTAAYRLRQFHLHWGSSDDHGSEHTVDGVKYAAELHLVHWN 421
+ V FDDT D+S+LRGGPLT +YRLRQFHLHWGS+DDHGSEH VDGV+YAAELH+VHWN
Sbjct: 66 SFNVDFDDTDDKSVLRGGPLTGSYRLRQFHLHWGSTDDHGSEHVVDGVRYAAELHVVHWN 125
Query: 422 S-KYNSFATALKHPDGVAVVGIFLKIGREKGEFQLVLDALDKIKTKGKEAPFTNFNPSCL 598
S KY SF A PDG+AV+GIFL+IG + Q + D LD IK KGK+ FTNF+P CL
Sbjct: 126 SDKYPSFVEAAHEPDGLAVLGIFLQIGEHNPQLQKITDILDSIKEKGKQTRFTNFDPVCL 185
Query: 599 FPACRDYWTYHGSFTTPPCEECIVWLLLKEPITVSSDQMAKLRSLYSSAENEPPVPLVRN 778
P CRDYWTY GS T PP E + W++LK+PI +SS Q+A R+L S E E L+ N
Sbjct: 186 LPPCRDYWTYPGSLTVPPLLESVTWIILKQPINISSQQLAAFRTLLCSREGETAAFLLSN 245
Query: 779 WRPPQPIKGRIVKASFK 829
RPPQP+KGR V+ASF+
Sbjct: 246 HRPPQPLKGRKVRASFR 262
>ref|NP_848667.1| carbonic anhydrase 2 [Bos taurus].
Length = 260
Score = 317 bits (813), Expect = 1e-86
Identities = 143/256 (55%), Positives = 182/256 (71%)
Frame = +2
Query: 50 MAKEWGYAAHNGPDHWHELYPIAKGDNQSPIELHTKDIKHDPSLLPWTASYDPGSAKTIL 229
M+ WGY HNGP+HWH+ +PIA G+ QSP+++ TK + DP+L P Y +++ ++
Sbjct: 1 MSHHWGYGKHNGPEHWHKDFPIANGERQSPVDIDTKAVVQDPALKPLALVYGEATSRRMV 60
Query: 230 NNGKTCRVVFDDTYDRSMLRGGPLTAAYRLRQFHLHWGSSDDHGSEHTVDGVKYAAELHL 409
NNG + V +DD+ D+++L+ GPLT YRL QFH HWGSSDD GSEHTVD KYAAELHL
Sbjct: 61 NNGHSFNVEYDDSQDKAVLKDGPLTGTYRLVQFHFHWGSSDDQGSEHTVDRKKYAAELHL 120
Query: 410 VHWNSKYNSFATALKHPDGVAVVGIFLKIGREKGEFQLVLDALDKIKTKGKEAPFTNFNP 589
VHWN+KY F TA + PDG+AVVG+FLK+G Q VLDALD IKTKGK F NF+P
Sbjct: 121 VHWNTKYGDFGTAAQQPDGLAVVGVFLKVGDANPALQKVLDALDSIKTKGKSTDFPNFDP 180
Query: 590 SCLFPACRDYWTYHGSFTTPPCEECIVWLLLKEPITVSSDQMAKLRSLYSSAENEPPVPL 769
L P DYWTY GS TTPP E + W++LKEPI+VSS QM K R+L +AE EP + +
Sbjct: 181 GSLLPNVLDYWTYPGSLTTPPLLESVTWIVLKEPISVSSQQMLKFRTLNFNAEGEPELLM 240
Query: 770 VRNWRPPQPIKGRIVK 817
+ NWRP QP+K R V+
Sbjct: 241 LANWRPAQPLKNRQVR 256
>ref|NP_001068934.1| carbonic anhydrase 1 [Bos taurus].
Length = 261
Score = 310 bits (794), Expect = 2e-84
Identities = 143/257 (55%), Positives = 188/257 (73%), Gaps = 1/257 (0%)
Frame = +2
Query: 59 EWGYAAHNGPDHWHELYPIAKGDNQSPIELHTKDIKHDPSLLPWTASYDPGSAKTILNNG 238
+WGY NGP+HW +LYPIA G+NQSPI++ T + K DPSL P + SY+P +AK I+N G
Sbjct: 5 DWGYDGENGPEHWGKLYPIANGNNQSPIDIKTSETKRDPSLKPLSVSYNPATAKEIVNVG 64
Query: 239 KTCRVVFDDTYDRSMLRGGPLTAAYRLRQFHLHWGSSDDHGSEHTVDGVKYAAELHLVHW 418
+ V F+D+ +RS+L+GGPL+ +YRLRQFH HWG +DD GSEH VDG K++AELHLVHW
Sbjct: 65 HSFHVNFEDSDNRSVLKGGPLSESYRLRQFHFHWGITDDCGSEHLVDGAKFSAELHLVHW 124
Query: 419 NS-KYNSFATALKHPDGVAVVGIFLKIGREKGEFQLVLDALDKIKTKGKEAPFTNFNPSC 595
NS KY SFA A DG+A++G+ +K+G+ Q VLDAL +K K K+APFTNF+PS
Sbjct: 125 NSAKYPSFADAASQADGLALIGVLVKVGQANPNLQKVLDALKAVKNKNKKAPFTNFDPSV 184
Query: 596 LFPACRDYWTYHGSFTTPPCEECIVWLLLKEPITVSSDQMAKLRSLYSSAENEPPVPLVR 775
L P DYW Y GS T PP E + W++ KE I+VSS+Q+A+ RSL ++AE + V + +
Sbjct: 185 LLPPSLDYWAYSGSLTHPPLHESVTWIIFKETISVSSEQLAQFRSLLANAEGDREVHIKQ 244
Query: 776 NWRPPQPIKGRIVKASF 826
N RPPQP+ GR VKASF
Sbjct: 245 NNRPPQPLNGRTVKASF 261
>ref|XP_002692874.1| PREDICTED: carbonic anhydrase 1-like [Bos taurus].
Length = 261
Score = 307 bits (787), Expect = 1e-83
Identities = 141/257 (54%), Positives = 187/257 (72%), Gaps = 1/257 (0%)
Frame = +2
Query: 59 EWGYAAHNGPDHWHELYPIAKGDNQSPIELHTKDIKHDPSLLPWTASYDPGSAKTILNNG 238
+WGY NGP+HW +LYPIA G+NQSPI++ T + K DPSL P + SY+P +AK I+N G
Sbjct: 5 DWGYDGENGPEHWGKLYPIANGNNQSPIDIKTSETKRDPSLKPLSVSYNPATAKEIVNVG 64
Query: 239 KTCRVVFDDTYDRSMLRGGPLTAAYRLRQFHLHWGSSDDHGSEHTVDGVKYAAELHLVHW 418
+ V F+D+ +RS+L+GGPL+ +YRLRQFH HWG +DD GSEH VDG K++AELHLVHW
Sbjct: 65 HSFHVNFEDSDNRSVLKGGPLSESYRLRQFHFHWGITDDCGSEHLVDGAKFSAELHLVHW 124
Query: 419 NS-KYNSFATALKHPDGVAVVGIFLKIGREKGEFQLVLDALDKIKTKGKEAPFTNFNPSC 595
NS KY SFA A DG+A++G+ +K+G+ Q VLDAL +K K K+APFTNF+PS
Sbjct: 125 NSAKYPSFADAASKADGLALIGVLVKVGQANPNLQKVLDALKAVKNKNKKAPFTNFDPSV 184
Query: 596 LFPACRDYWTYHGSFTTPPCEECIVWLLLKEPITVSSDQMAKLRSLYSSAENEPPVPLVR 775
L P DYW Y GS T PP E + W++ KE I+ SS+Q+A+ R L ++AE + + + +
Sbjct: 185 LLPPSLDYWAYSGSLTHPPLHESVTWIIFKETISASSEQLAQFRCLLANAEGDGELCIKQ 244
Query: 776 NWRPPQPIKGRIVKASF 826
N RPPQP+KGR VKASF
Sbjct: 245 NHRPPQPLKGRTVKASF 261
>ref|XP_001250684.1| PREDICTED: carbonic anhydrase 1-like [Bos taurus].
Length = 261
Score = 307 bits (787), Expect = 1e-83
Identities = 141/257 (54%), Positives = 187/257 (72%), Gaps = 1/257 (0%)
Frame = +2
Query: 59 EWGYAAHNGPDHWHELYPIAKGDNQSPIELHTKDIKHDPSLLPWTASYDPGSAKTILNNG 238
+WGY NGP+HW +LYPIA G+NQSPI++ T + K DPSL P + SY+P +AK I+N G
Sbjct: 5 DWGYDGENGPEHWGKLYPIANGNNQSPIDIKTSETKRDPSLKPLSVSYNPATAKEIVNVG 64
Query: 239 KTCRVVFDDTYDRSMLRGGPLTAAYRLRQFHLHWGSSDDHGSEHTVDGVKYAAELHLVHW 418
+ V F+D+ +RS+L+GGPL+ +YRLRQFH HWG +DD GSEH VDG K++AELHLVHW
Sbjct: 65 HSFHVNFEDSDNRSVLKGGPLSESYRLRQFHFHWGITDDCGSEHLVDGAKFSAELHLVHW 124
Query: 419 NS-KYNSFATALKHPDGVAVVGIFLKIGREKGEFQLVLDALDKIKTKGKEAPFTNFNPSC 595
NS KY SFA A DG+A++G+ +K+G+ Q VLDAL +K K K+APFTNF+PS
Sbjct: 125 NSAKYPSFADAASKADGLALIGVLVKVGQANPNLQKVLDALKAVKNKNKKAPFTNFDPSV 184
Query: 596 LFPACRDYWTYHGSFTTPPCEECIVWLLLKEPITVSSDQMAKLRSLYSSAENEPPVPLVR 775
L P DYW Y GS T PP E + W++ KE I+ SS+Q+A+ R L ++AE + + + +
Sbjct: 185 LLPPSLDYWAYSGSLTHPPLHESVTWIIFKETISASSEQLAQFRCLLANAEGDGELCIKQ 244
Query: 776 NWRPPQPIKGRIVKASF 826
N RPPQP+KGR VKASF
Sbjct: 245 NHRPPQPLKGRTVKASF 261
>ref|NP_001179451.1| carbonic anhydrase 7 [Bos taurus].
Length = 264
Score = 289 bits (739), Expect = 4e-78
Identities = 132/257 (51%), Positives = 178/257 (69%), Gaps = 1/257 (0%)
Frame = +2
Query: 62 WGYAAHNGPDHWHELYPIAKGDNQSPIELHTKDIKHDPSLLPWTASYDPGSAKTILNNGK 241
WGY ++GP HWH+LYPIA+GD QSPI + + + PSL P SY+ ++ +I NNG
Sbjct: 7 WGYGQNDGPSHWHKLYPIAQGDRQSPINIVSSQAVYSPSLKPLEISYESCTSLSIANNGH 66
Query: 242 TCRVVFDDTYDRSMLRGGPLTAAYRLRQFHLHWGSSDDHGSEHTVDGVKYAAELHLVHWN 421
+ +V F+D+ DR+++ GGPL YRL+QFH HWG GSEHTVDG + +ELHLVHWN
Sbjct: 67 SVQVDFNDSDDRTVVSGGPLDGPYRLKQFHFHWGKKHGVGSEHTVDGKSFPSELHLVHWN 126
Query: 422 SK-YNSFATALKHPDGVAVVGIFLKIGREKGEFQLVLDALDKIKTKGKEAPFTNFNPSCL 598
+K Y++F A PDG+AVVG+FL+ G E + DAL ++ KG +A F+ FNP CL
Sbjct: 127 AKKYSTFGEAASAPDGLAVVGVFLETGDEHPSMNRLTDALYMVRFKGTKAQFSCFNPKCL 186
Query: 599 FPACRDYWTYHGSFTTPPCEECIVWLLLKEPITVSSDQMAKLRSLYSSAENEPPVPLVRN 778
PA R YWTY GS TTPP E + W++L+EPI +S QM K RSL ++E + + +V N
Sbjct: 187 LPASRHYWTYPGSLTTPPLSESVTWIVLREPIRISERQMEKFRSLLFTSEEDERIHMVNN 246
Query: 779 WRPPQPIKGRIVKASFK 829
+RPPQP+KGR+VKASF+
Sbjct: 247 FRPPQPLKGRVVKASFR 263
>ref|XP_002694851.1| PREDICTED: carbonic anhydrase VII-like [Bos taurus].
Length = 264
Score = 289 bits (739), Expect = 4e-78
Identities = 132/257 (51%), Positives = 178/257 (69%), Gaps = 1/257 (0%)
Frame = +2
Query: 62 WGYAAHNGPDHWHELYPIAKGDNQSPIELHTKDIKHDPSLLPWTASYDPGSAKTILNNGK 241
WGY ++GP HWH+LYPIA+GD QSPI + + + PSL P SY+ ++ +I NNG
Sbjct: 7 WGYGQNDGPSHWHKLYPIAQGDRQSPINIVSSQAVYSPSLKPLEISYESCTSLSIANNGH 66
Query: 242 TCRVVFDDTYDRSMLRGGPLTAAYRLRQFHLHWGSSDDHGSEHTVDGVKYAAELHLVHWN 421
+ +V F+D+ DR+++ GGPL YRL+QFH HWG GSEHTVDG + +ELHLVHWN
Sbjct: 67 SVQVDFNDSDDRTVVSGGPLDGPYRLKQFHFHWGKKHGVGSEHTVDGKSFPSELHLVHWN 126
Query: 422 SK-YNSFATALKHPDGVAVVGIFLKIGREKGEFQLVLDALDKIKTKGKEAPFTNFNPSCL 598
+K Y++F A PDG+AVVG+FL+ G E + DAL ++ KG +A F+ FNP CL
Sbjct: 127 AKKYSTFGEAASAPDGLAVVGVFLETGDEHPSMNRLTDALYMVRFKGTKAQFSCFNPKCL 186
Query: 599 FPACRDYWTYHGSFTTPPCEECIVWLLLKEPITVSSDQMAKLRSLYSSAENEPPVPLVRN 778
PA R YWTY GS TTPP E + W++L+EPI +S QM K RSL ++E + + +V N
Sbjct: 187 LPASRHYWTYPGSLTTPPLSESVTWIVLREPIRISERQMEKFRSLLFTSEEDERIHMVNN 246
Query: 779 WRPPQPIKGRIVKASFK 829
+RPPQP+KGR+VKASF+
Sbjct: 247 FRPPQPLKGRVVKASFR 263
>ref|NP_001074377.2| carbonic anhydrase 5B, mitochondrial [Bos taurus].
Length = 317
Score = 241 bits (615), Expect = 1e-63
Identities = 119/270 (44%), Positives = 165/270 (61%), Gaps = 3/270 (1%)
Frame = +2
Query: 26 RPVPTKTTMAKEWGYAAHNGPDH--WHELYPIAKGDNQSPIELHTKDIKHDPSLLPWTAS 199
R +P + Y + N H W ++ G+ QSPI + KD +DP L P T S
Sbjct: 27 RSMPARPCSLYTCTYKSRNRVLHPLWEKVDLAPAGERQSPINIRWKDSVYDPGLQPLTIS 86
Query: 200 YDPGSAKTILNNGKTCRVVFDDTYDRSMLRGGPLTAAYRLRQFHLHWGSSDDHGSEHTVD 379
YDP + + NNG + V F+D+ D+S++ GGPL YRL+QFH HWG+ D GSEHTVD
Sbjct: 87 YDPTTCLHVWNNGYSFLVEFEDSADKSVIEGGPLEHNYRLKQFHFHWGAIDAWGSEHTVD 146
Query: 380 GVKYAAELHLVHWNS-KYNSFATALKHPDGVAVVGIFLKIGREKGEFQLVLDALDKIKTK 556
Y AELHLVHWN+ K+ F A +G+AV+G+FLK+G+ E Q +++ L IK K
Sbjct: 147 SKCYPAELHLVHWNAVKFEHFEDAALEENGLAVIGVFLKLGKHHKELQKLVNILPSIKHK 206
Query: 557 GKEAPFTNFNPSCLFPACRDYWTYHGSFTTPPCEECIVWLLLKEPITVSSDQMAKLRSLY 736
A F +F+PSCL P C DYWTY GS TTPP E + W++ K+P+ V DQ+ + R+L
Sbjct: 207 DTLAEFGSFDPSCLMPTCPDYWTYSGSLTTPPLSESVTWIIKKQPVEVDHDQLEQFRTLL 266
Query: 737 SSAENEPPVPLVRNWRPPQPIKGRIVKASF 826
++E E +V N+RP QP+ R V++SF
Sbjct: 267 FTSEGEKEKRMVDNFRPLQPLMNRTVRSSF 296
>ref|NP_001179338.1| carbonic anhydrase 5A, mitochondrial [Bos taurus].
Length = 310
Score = 227 bits (578), Expect = 2e-59
Identities = 113/246 (45%), Positives = 150/246 (60%), Gaps = 1/246 (0%)
Frame = +2
Query: 95 WHELYPIAKGDNQSPIELHTKDIKHDPSLLPWTASYDPGSAKTILNNGKTCRVVFDDTYD 274
W + G QSPI + +D +DP L P SY+ + + N G +V FDD+ +
Sbjct: 57 WKGPASVPGGTRQSPINIRWRDSVYDPQLQPLGVSYNAEACLYVWNTGYLFQVEFDDSTE 116
Query: 275 RSMLRGGPLTAAYRLRQFHLHWGSSDDHGSEHTVDGVKYAAELHLVHWNS-KYNSFATAL 451
S + GGPL YRL+QFH HWG+ ++ GSEHTVD Y AELHLVHWN+ KY ++ A+
Sbjct: 117 GSGISGGPLENHYRLKQFHFHWGAVNEWGSEHTVDDRVYPAELHLVHWNAVKYQNYTDAV 176
Query: 452 KHPDGVAVVGIFLKIGREKGEFQLVLDALDKIKTKGKEAPFTNFNPSCLFPACRDYWTYH 631
DG+AVVG+FLK+G E Q ++ L IK K A F PSCL PAC+DYWTY
Sbjct: 177 TGADGLAVVGVFLKLGARHEELQELVAVLPDIKHKDARAALGPFQPSCLLPACQDYWTYP 236
Query: 632 GSFTTPPCEECIVWLLLKEPITVSSDQMAKLRSLYSSAENEPPVPLVRNWRPPQPIKGRI 811
GS TTPP E + W++ K+PI V+ DQ+A RSL S E +V N+RP QP+ R
Sbjct: 237 GSLTTPPLSESVTWIIHKKPIEVAQDQLAAFRSLLFSVPGEEEKTMVNNYRPLQPLMNRK 296
Query: 812 VKASFK 829
V++SF+
Sbjct: 297 VRSSFQ 302
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 48,260,373
Number of extensions: 1310273
Number of successful extensions: 4935
Number of sequences better than 1.0e-05: 27
Number of HSP's gapped: 4871
Number of HSP's successfully gapped: 27
Length of query: 432
Length of database: 17,681,374
Length adjustment: 105
Effective length of query: 327
Effective length of database: 14,207,134
Effective search space: 4645732818
Effective search space used: 4645732818
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-001857
(1298 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001138644.1| carbonic anhydrase 3 [Canis lupus familiaris]. 522 e-148
Alignment gi|NP_001138642.1| carbonic anhydrase 2 [Canis lupus familiaris]. 329 3e-90
Alignment gi|NP_001138643.1| carbonic anhydrase 1 [Canis lupus familiaris]. 315 6e-86
Alignment gi|XP_544159.1| PREDICTED: similar to Carbonic anhydrase XIII (... 314 1e-85
Alignment gi|XP_546892.2| PREDICTED: similar to Carbonic anhydrase VII (C... 273 2e-73
Alignment gi|XP_543579.2| PREDICTED: similar to carbonic anhydrase VB, mi... 243 3e-64
Alignment gi|XP_851479.1| PREDICTED: similar to carbonic anhydrase VA, mi... 222 5e-58
Alignment gi|XP_861083.1| PREDICTED: similar to Carbonic anhydrase II (Ca... 180 3e-45
Alignment gi|XP_544094.2| PREDICTED: similar to carbonic anhydrase VIII [... 176 4e-44
Alignment gi|XP_540298.2| PREDICTED: similar to carbonic anhydrase XIV pr... 155 6e-38
>ref|NP_001138644.1| carbonic anhydrase 3 [Canis lupus familiaris].
Length = 260
Score = 522 bits (1345), Expect = e-148
Identities = 237/260 (91%), Positives = 250/260 (96%)
Frame = +2
Query: 50 MAKEWGYAAHNGPDHWHELYPIAKGDNQSPIELHTKDIKHDPSLLPWTASYDPGSAKTIL 229
MAKEWGYA+HNGPDHWHELYPIAKGDNQSPIELHTKDI+HDPSLLPW+ASYDPGS KTIL
Sbjct: 1 MAKEWGYASHNGPDHWHELYPIAKGDNQSPIELHTKDIRHDPSLLPWSASYDPGSCKTIL 60
Query: 230 NNGKTCRVVFDDTYDRSMLRGGPLTAAYRLRQFHLHWGSSDDHGSEHTVDGVKYAAELHL 409
NNGKTCRVVFDDTYDRSMLRGGPLT YRLRQFHLHWG+SDDHGSEHTVDGVKYAAELHL
Sbjct: 61 NNGKTCRVVFDDTYDRSMLRGGPLTGPYRLRQFHLHWGASDDHGSEHTVDGVKYAAELHL 120
Query: 410 VHWNSKYNSFATALKHPDGVAVVGIFLKIGREKGEFQLVLDALDKIKTKGKEAPFTNFNP 589
VHWN KYN++ ALK PDG+AVVGIFLKIGREKGEFQL LDALDK+KTKGKEAPFT F+P
Sbjct: 121 VHWNPKYNTYGEALKQPDGIAVVGIFLKIGREKGEFQLFLDALDKVKTKGKEAPFTKFDP 180
Query: 590 SCLFPACRDYWTYHGSFTTPPCEECIVWLLLKEPITVSSDQMAKLRSLYSSAENEPPVPL 769
SCLFPACRDYWTYHGSFTTPPCEECIVW+LLKEP+TVSSDQMAKLRSL+SSAENEPPVPL
Sbjct: 181 SCLFPACRDYWTYHGSFTTPPCEECIVWILLKEPMTVSSDQMAKLRSLFSSAENEPPVPL 240
Query: 770 VRNWRPPQPIKGRIVKASFK 829
V NWRPPQPIKGR+VKASFK
Sbjct: 241 VGNWRPPQPIKGRVVKASFK 260
>ref|NP_001138642.1| carbonic anhydrase 2 [Canis lupus familiaris].
Length = 260
Score = 329 bits (844), Expect = 3e-90
Identities = 152/260 (58%), Positives = 186/260 (71%)
Frame = +2
Query: 50 MAKEWGYAAHNGPDHWHELYPIAKGDNQSPIELHTKDIKHDPSLLPWTASYDPGSAKTIL 229
MA WGYA HNGP+HWH+ +PIAKG+ QSP+++ TK HDP+L YD ++ I+
Sbjct: 1 MAHHWGYAKHNGPEHWHKDFPIAKGERQSPVDIDTKAAVHDPALKSLCPCYDQAVSQRII 60
Query: 230 NNGKTCRVVFDDTYDRSMLRGGPLTAAYRLRQFHLHWGSSDDHGSEHTVDGVKYAAELHL 409
NNG + V FDD+ D+++L+GGPLT YRL QFH HWGSSD GSEHTVD KYAAELHL
Sbjct: 61 NNGHSFNVEFDDSQDKTVLKGGPLTGTYRLIQFHFHWGSSDGQGSEHTVDKKKYAAELHL 120
Query: 410 VHWNSKYNSFATALKHPDGVAVVGIFLKIGREKGEFQLVLDALDKIKTKGKEAPFTNFNP 589
VHWN+KY F A++ PDG+AV+GIFLKIG Q +LDALD IKTKGK A FTNF+P
Sbjct: 121 VHWNTKYGEFGKAVQQPDGLAVLGIFLKIGGANPGLQKILDALDSIKTKGKSADFTNFDP 180
Query: 590 SCLFPACRDYWTYHGSFTTPPCEECIVWLLLKEPITVSSDQMAKLRSLYSSAENEPPVPL 769
L P DYWTY GS TTPP EC+ W++LKEPI+VSS+QM K R L + E EP +
Sbjct: 181 RGLLPESLDYWTYPGSLTTPPLLECVTWIVLKEPISVSSEQMLKFRKLNFNKEGEPEELM 240
Query: 770 VRNWRPPQPIKGRIVKASFK 829
+ NWRP QP+ R + ASFK
Sbjct: 241 MDNWRPAQPLHSRQINASFK 260
>ref|NP_001138643.1| carbonic anhydrase 1 [Canis lupus familiaris].
Length = 261
Score = 315 bits (807), Expect = 6e-86
Identities = 144/259 (55%), Positives = 193/259 (74%), Gaps = 1/259 (0%)
Frame = +2
Query: 53 AKEWGYAAHNGPDHWHELYPIAKGDNQSPIELHTKDIKHDPSLLPWTASYDPGSAKTILN 232
+ WGY NGP+ W +LYPIA G+NQSPI++ T + KHD SL P + SY+P +AK I+N
Sbjct: 3 SSNWGYDDKNGPEQWGKLYPIANGNNQSPIDIKTSETKHDTSLKPISVSYNPATAKEIIN 62
Query: 233 NGKTCRVVFDDTYDRSMLRGGPLTAAYRLRQFHLHWGSSDDHGSEHTVDGVKYAAELHLV 412
G + V ++D DRS+L+GGPL+A+YRL QFH HWGS++D+GSEHTVDGVKY+ ELH+V
Sbjct: 63 VGHSFHVNYEDHDDRSVLKGGPLSASYRLSQFHFHWGSTNDYGSEHTVDGVKYSGELHIV 122
Query: 413 HWN-SKYNSFATALKHPDGVAVVGIFLKIGREKGEFQLVLDALDKIKTKGKEAPFTNFNP 589
HWN SKY+SFA A+ DG+A++ + +KI + + Q VLDAL+ +KTK K APFTNF+P
Sbjct: 123 HWNSSKYSSFAEAVSQADGLAIIAVLMKIDQANPKLQKVLDALNAVKTKNKRAPFTNFDP 182
Query: 590 SCLFPACRDYWTYHGSFTTPPCEECIVWLLLKEPITVSSDQMAKLRSLYSSAENEPPVPL 769
S L P+ DYWTY+GS T PP E + W++ K+ I +S +Q+A+ RSL S+ E + VP+
Sbjct: 183 SILLPSSLDYWTYNGSLTHPPLYESVSWIICKDSIGISPEQLAQFRSLLSNVEGDQAVPI 242
Query: 770 VRNWRPPQPIKGRIVKASF 826
N RPPQP+KGRIVKASF
Sbjct: 243 QHNNRPPQPLKGRIVKASF 261
>ref|XP_544159.1| PREDICTED: similar to Carbonic anhydrase XIII (Carbonate
dehydratase XIII) (CA-XIII) [Canis familiaris].
Length = 279
Score = 314 bits (804), Expect = 1e-85
Identities = 148/256 (57%), Positives = 184/256 (71%), Gaps = 1/256 (0%)
Frame = +2
Query: 62 WGYAAHNGPDHWHELYPIAKGDNQSPIELHTKDIKHDPSLLPWTASYDPGSAKTILNNGK 241
W +GP HW++ +PIA GD QSPIE+ TK++K+D SL P + YD SAK I N+G
Sbjct: 23 WTKNQKSGPIHWNKFFPIADGDQQSPIEIKTKEVKYDSSLRPLSIKYDANSAKIISNSGH 82
Query: 242 TCRVVFDDTYDRSMLRGGPLTAAYRLRQFHLHWGSSDDHGSEHTVDGVKYAAELHLVHWN 421
+ V FDDT D+S+LRGGPLT +YRLRQFHLHWGS+DDHGSEH VDGV+YAAELH+VHWN
Sbjct: 83 SFSVDFDDTEDKSVLRGGPLTGSYRLRQFHLHWGSADDHGSEHVVDGVRYAAELHVVHWN 142
Query: 422 S-KYNSFATALKHPDGVAVVGIFLKIGREKGEFQLVLDALDKIKTKGKEAPFTNFNPSCL 598
S KY SF A PDG+AV+G+FL+IG + Q + D LD IK KGK+ FTNF+P L
Sbjct: 143 SDKYPSFVEAAHEPDGLAVLGVFLQIGEHNSQLQKITDILDSIKEKGKQTRFTNFDPLSL 202
Query: 599 FPACRDYWTYHGSFTTPPCEECIVWLLLKEPITVSSDQMAKLRSLYSSAENEPPVPLVRN 778
P DYWTY GS T PP E + W++LK+PI +SS Q+A R+L +AE E L+ N
Sbjct: 203 LPPSWDYWTYPGSLTVPPLLESVTWIVLKQPINISSQQLATFRTLLCTAEGEAAAFLLSN 262
Query: 779 WRPPQPIKGRIVKASF 826
RPPQP+KGR V+ASF
Sbjct: 263 HRPPQPLKGRKVRASF 278
>ref|XP_546892.2| PREDICTED: similar to Carbonic anhydrase VII (Carbonate dehydratase
VII) (CA-VII) [Canis familiaris].
Length = 278
Score = 273 bits (699), Expect = 2e-73
Identities = 128/250 (51%), Positives = 170/250 (68%), Gaps = 1/250 (0%)
Frame = +2
Query: 83 GPDHWHELYPIAKGDNQSPIELHTKDIKHDPSLLPWTASYDPGSAKTILNNGKTCRVVFD 262
GP WH+LYPIA+GD QSPI + + + PSL P SY+ + +I NNG + +V F+
Sbjct: 28 GPSQWHKLYPIAQGDRQSPINIVSSQAVYSPSLKPLELSYEACISLSITNNGHSVQVDFN 87
Query: 263 DTYDRSMLRGGPLTAAYRLRQFHLHWGSSDDHGSEHTVDGVKYAAELHLVHWNSK-YNSF 439
D+ DR+ + GGPL YRL+Q H HWG GSEHTVDG + +ELHLVHWN+K Y++F
Sbjct: 88 DSDDRTAVTGGPLDGPYRLKQLHFHWGKKHSVGSEHTVDGKSFPSELHLVHWNAKKYSTF 147
Query: 440 ATALKHPDGVAVVGIFLKIGREKGEFQLVLDALDKIKTKGKEAPFTNFNPSCLFPACRDY 619
A PDG+AVVGIFL+ G E + DAL ++ KG +A F+ FNP CL PA R Y
Sbjct: 148 GEAASAPDGLAVVGIFLETGDEHPSMNRLTDALYMVRFKGTKAQFSCFNPKCLLPASRHY 207
Query: 620 WTYHGSFTTPPCEECIVWLLLKEPITVSSDQMAKLRSLYSSAENEPPVPLVRNWRPPQPI 799
WTY GS TTPP E + W++L+EPI++S QM K RSL ++E + + +V N+RPPQP+
Sbjct: 208 WTYPGSLTTPPLSESVTWIVLREPISISERQMEKFRSLLFTSEEDERIHMVNNFRPPQPL 267
Query: 800 KGRIVKASFK 829
KGR+VKASF+
Sbjct: 268 KGRVVKASFR 277
>ref|XP_543579.2| PREDICTED: similar to carbonic anhydrase VB, mitochondrial
precursor [Canis familiaris].
Length = 317
Score = 243 bits (620), Expect = 3e-64
Identities = 120/270 (44%), Positives = 166/270 (61%), Gaps = 1/270 (0%)
Frame = +2
Query: 23 SRPVPTKTTMAKEWGYAAHNGPDHWHELYPIAKGDNQSPIELHTKDIKHDPSLLPWTASY 202
+RP T K A H W + + G+ QSPI + +D DP+L P T SY
Sbjct: 31 ARPCSLYTCTYKTRNRALH---PLWESVDLVPVGERQSPINIRWRDSVFDPALKPLTISY 87
Query: 203 DPGSAKTILNNGKTCRVVFDDTYDRSMLRGGPLTAAYRLRQFHLHWGSSDDHGSEHTVDG 382
DP + + NNG + V F+D+ D+S+++GGPL YRL+QFH HWG+ D GSEHTVD
Sbjct: 88 DPTTCLHVWNNGYSFLVEFEDSTDKSVIKGGPLEDNYRLKQFHFHWGAIDAWGSEHTVDS 147
Query: 383 VKYAAELHLVHWNS-KYNSFATALKHPDGVAVVGIFLKIGREKGEFQLVLDALDKIKTKG 559
Y AELHLVHWN+ K+ +F A G+AV+G+FLK+G+ E Q ++D L IK K
Sbjct: 148 KCYPAELHLVHWNAVKFENFEDAALEEHGLAVIGVFLKLGKHHQELQKLVDTLPSIKHKD 207
Query: 560 KEAPFTNFNPSCLFPACRDYWTYHGSFTTPPCEECIVWLLLKEPITVSSDQMAKLRSLYS 739
F +F+PSCL PAC DYWTY GS TTPP E + W++ K+P+ V DQ+ + R+L
Sbjct: 208 TLVEFGSFDPSCLMPACPDYWTYSGSLTTPPLSESVTWIIKKQPVEVDHDQLEQFRTLLF 267
Query: 740 SAENEPPVPLVRNWRPPQPIKGRIVKASFK 829
++E E +V N+RP QP+ R V++SF+
Sbjct: 268 TSEGEKEKRMVDNFRPLQPLMNRTVRSSFR 297
>ref|XP_851479.1| PREDICTED: similar to carbonic anhydrase VA, mitochondrial
precursor [Canis familiaris].
Length = 295
Score = 222 bits (566), Expect = 5e-58
Identities = 111/246 (45%), Positives = 150/246 (60%), Gaps = 1/246 (0%)
Frame = +2
Query: 95 WHELYPIAKGDNQSPIELHTKDIKHDPSLLPWTASYDPGSAKTILNNGKTCRVVFDDTYD 274
W L + G QSPI + +D +DP L SY S + N G +V FDD+ +
Sbjct: 38 WKGLASVPGGTRQSPINIRWRDSVYDPRLKSLQVSYAATSCLHVWNTGYFFQVEFDDSTE 97
Query: 275 RSMLRGGPLTAAYRLRQFHLHWGSSDDHGSEHTVDGVKYAAELHLVHWNS-KYNSFATAL 451
S + GGPL YRL+QFH HWG+++ GSEHTVD Y AELHLVHWNS KY ++ A+
Sbjct: 98 GSGISGGPLENHYRLKQFHFHWGAANAWGSEHTVDDRAYPAELHLVHWNSVKYQNYKEAI 157
Query: 452 KHPDGVAVVGIFLKIGREKGEFQLVLDALDKIKTKGKEAPFTNFNPSCLFPACRDYWTYH 631
+GVAV+G+FL++G Q +++ L +IK KG A F PSCL P CRDYWTY
Sbjct: 158 MGENGVAVIGVFLQLGAHHEGLQKLVEVLPEIKHKGARATMGPFQPSCLLPTCRDYWTYP 217
Query: 632 GSFTTPPCEECIVWLLLKEPITVSSDQMAKLRSLYSSAENEPPVPLVRNWRPPQPIKGRI 811
GS TTPP E + W++ K+PI V+ +Q+A R+L SA E +V N RP QP+ R
Sbjct: 218 GSLTTPPLTESVTWIIQKQPIEVAPNQLAAFRTLLFSALGEEEQMMVNNNRPVQPLMNRE 277
Query: 812 VKASFK 829
+++SF+
Sbjct: 278 IRSSFQ 283
>ref|XP_861083.1| PREDICTED: similar to Carbonic anhydrase II (Carbonate dehydratase
II) (CA-II) (Carbonic anhydrase C) isoform 2 [Canis
familiaris].
Length = 150
Score = 180 bits (456), Expect = 3e-45
Identities = 84/144 (58%), Positives = 102/144 (70%)
Frame = +2
Query: 398 ELHLVHWNSKYNSFATALKHPDGVAVVGIFLKIGREKGEFQLVLDALDKIKTKGKEAPFT 577
+LHLVHWN+KY F A++ PDG+AV+GIFLKIG Q +LDALD IKTKGK A FT
Sbjct: 7 QLHLVHWNTKYGEFGKAVQQPDGLAVLGIFLKIGGANPGLQKILDALDSIKTKGKSADFT 66
Query: 578 NFNPSCLFPACRDYWTYHGSFTTPPCEECIVWLLLKEPITVSSDQMAKLRSLYSSAENEP 757
NF+P L P DYWTY GS TTPP EC+ W++LKEPI+VSS+QM K R L + E EP
Sbjct: 67 NFDPRGLLPESLDYWTYPGSLTTPPLLECVTWIVLKEPISVSSEQMLKFRKLNFNKEGEP 126
Query: 758 PVPLVRNWRPPQPIKGRIVKASFK 829
++ NWRP QP+ R + ASFK
Sbjct: 127 EELMMDNWRPAQPLHSRQINASFK 150
>ref|XP_544094.2| PREDICTED: similar to carbonic anhydrase VIII [Canis familiaris].
Length = 290
Score = 176 bits (446), Expect = 4e-44
Identities = 99/269 (36%), Positives = 150/269 (55%), Gaps = 12/269 (4%)
Frame = +2
Query: 59 EWGYAAHNGPDHWHELYPIAKGDNQSPIELHTKDIKHDPSLLPWTAS--YDPGSAKTILN 232
EWGY G + W ++P A G+ QSPI L++++ ++DPSLL S Y + N
Sbjct: 28 EWGY--EEGVE-WGLVFPDANGEYQSPINLNSREARYDPSLLDVRLSPNYVVCRDCEVTN 84
Query: 233 NGKTCRVVFDDTYDRSMLRGGPLTAA--YRLRQFHLHWGSSDDHGSEHTVDGVKYAAELH 406
+G T +V+ +S+L GGPL + L + HWG + GSEHTV+ + ELH
Sbjct: 85 DGHTIQVILKS---KSVLSGGPLPQGHEFELYEVRFHWGRENQRGSEHTVNFKAFPMELH 141
Query: 407 LVHWNSK-YNSFATALKHPDGVAVVGIFLKIGREKGEFQLVLDALDKIKTKGKEAPFTNF 583
L+HWNS + S A+ P G+A++ +F++IG+E + V + L I+ KGK F
Sbjct: 142 LIHWNSTLFGSIDEAVGKPHGIAIIALFVQIGKEHVGLKAVTEILQDIQYKGKSKTIPCF 201
Query: 584 NPSCLFP--ACRDYWTYHGSFTTPPCEECIVWLLLKEPITVSSDQMAKLRSLYSSAENEP 757
NP+ L P RDYW Y GS T PPC E + W+L + P+T+S Q+ + R L + +
Sbjct: 202 NPNTLLPDPLLRDYWVYEGSLTIPPCSEGVTWILFRYPLTISQLQIEEFRRLRTHVKGAE 261
Query: 758 PVP-----LVRNWRPPQPIKGRIVKASFK 829
V L N+RP QP+ R+++A+F+
Sbjct: 262 LVEGCDGILGDNFRPTQPLSDRVIRAAFQ 290
>ref|XP_540298.2| PREDICTED: similar to carbonic anhydrase XIV precursor [Canis
familiaris].
Length = 337
Score = 155 bits (393), Expect = 6e-38
Identities = 95/264 (35%), Positives = 137/264 (51%), Gaps = 7/264 (2%)
Frame = +2
Query: 56 KEWGYAAHNGPDHWHELYPIAKGDNQSPIELHTKDIKHDPSL--LPWTASYDPGSAKTIL 229
+ W Y +G DHW +P + QSPI++ T + DP L L PG+ L
Sbjct: 21 QHWTYVGPHGQDHWPASHPECGSNAQSPIDIQTDSVTFDPELPALQLQGYDQPGTEPLDL 80
Query: 230 -NNGKTCRVVFDDTYDRSMLRGGPLTAAYRLRQFHLHWGSSDD-HGSEHTVDGVKYAAEL 403
NNG T ++ T L G P Y Q HLHWG + GSEH ++G AAEL
Sbjct: 81 HNNGHTVQLSLPPTM---YLEGLP--RKYVAAQLHLHWGETGSLRGSEHQINGEATAAEL 135
Query: 404 HLVHWNS-KYNSFATALKHPDGVAVVGIFLKIGREKGE-FQLVLDALDKIKTKGKEAPFT 577
H+VH++S Y+S A P G+AV+GI +++G K ++ +L L +I+ K ++
Sbjct: 136 HIVHYDSDSYDSLGEAAPKPQGLAVLGILIEVGEAKNPVYEHILSHLHEIRHKDQKTSVP 195
Query: 578 NFNPSCLFPA-CRDYWTYHGSFTTPPCEECIVWLLLKEPITVSSDQMAKLRSLYSSAENE 754
FN L P ++ Y+GS TTPPC + ++W + +S Q+ +L+ S E E
Sbjct: 196 PFNVGELLPPQLNQFFRYNGSLTTPPCYQSVLWTVFNRRAQISMGQLEELQETLFSTEEE 255
Query: 755 PPVPLVRNWRPPQPIKGRIVKASF 826
P LVRN+R PQP+ R V ASF
Sbjct: 256 PSKLLVRNYRAPQPLNQRTVFASF 279
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 50,393,694
Number of extensions: 1353967
Number of successful extensions: 4915
Number of sequences better than 1.0e-05: 22
Number of HSP's gapped: 4860
Number of HSP's successfully gapped: 22
Length of query: 432
Length of database: 18,874,504
Length adjustment: 106
Effective length of query: 326
Effective length of database: 15,340,888
Effective search space: 5001129488
Effective search space used: 5001129488
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-001857
(1298 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_005172.1| carbonic anhydrase 3 [Homo sapiens]. 493 e-139
Alignment gi|NP_000058.1| carbonic anhydrase 2 [Homo sapiens]. 332 5e-91
Alignment gi|NP_940986.1| carbonic anhydrase 13 [Homo sapiens]. 325 4e-89
Alignment gi|NP_001158302.1| carbonic anhydrase 1 [Homo sapiens]. 311 1e-84
Alignment gi|NP_001122303.1| carbonic anhydrase 1 [Homo sapiens]. 311 1e-84
Alignment gi|NP_001122302.1| carbonic anhydrase 1 [Homo sapiens]. 311 1e-84
Alignment gi|NP_001122301.1| carbonic anhydrase 1 [Homo sapiens]. 311 1e-84
Alignment gi|NP_001729.1| carbonic anhydrase 1 [Homo sapiens]. 311 1e-84
Alignment gi|NP_005173.1| carbonic anhydrase 7 isoform 1 [Homo sapiens]. 291 1e-78
Alignment gi|NP_009151.1| carbonic anhydrase 5B, mitochondrial precursor ... 243 4e-64
>ref|NP_005172.1| carbonic anhydrase 3 [Homo sapiens].
Length = 260
Score = 493 bits (1269), Expect = e-139
Identities = 225/260 (86%), Positives = 239/260 (91%)
Frame = +2
Query: 50 MAKEWGYAAHNGPDHWHELYPIAKGDNQSPIELHTKDIKHDPSLLPWTASYDPGSAKTIL 229
MAKEWGYA+HNGPDHWHEL+P AKG+NQSP+ELHTKDI+HDPSL PW+ SYD GSAKTIL
Sbjct: 1 MAKEWGYASHNGPDHWHELFPNAKGENQSPVELHTKDIRHDPSLQPWSVSYDGGSAKTIL 60
Query: 230 NNGKTCRVVFDDTYDRSMLRGGPLTAAYRLRQFHLHWGSSDDHGSEHTVDGVKYAAELHL 409
NNGKTCRVVFDDTYDRSMLRGGPL YRLRQFHLHWGSSDDHGSEHTVDGVKYAAELHL
Sbjct: 61 NNGKTCRVVFDDTYDRSMLRGGPLPGPYRLRQFHLHWGSSDDHGSEHTVDGVKYAAELHL 120
Query: 410 VHWNSKYNSFATALKHPDGVAVVGIFLKIGREKGEFQLVLDALDKIKTKGKEAPFTNFNP 589
VHWN KYN+F ALK DG+AV+GIFLKIG E GEFQ+ LDALDKIKTKGKEAPFT F+P
Sbjct: 121 VHWNPKYNTFKEALKQRDGIAVIGIFLKIGHENGEFQIFLDALDKIKTKGKEAPFTKFDP 180
Query: 590 SCLFPACRDYWTYHGSFTTPPCEECIVWLLLKEPITVSSDQMAKLRSLYSSAENEPPVPL 769
SCLFPACRDYWTY GSFTTPPCEECIVWLLLKEP+TVSSDQMAKLRSL SSAENEPPVPL
Sbjct: 181 SCLFPACRDYWTYQGSFTTPPCEECIVWLLLKEPMTVSSDQMAKLRSLLSSAENEPPVPL 240
Query: 770 VRNWRPPQPIKGRIVKASFK 829
V NWRPPQPI R+V+ASFK
Sbjct: 241 VSNWRPPQPINNRVVRASFK 260
>ref|NP_000058.1| carbonic anhydrase 2 [Homo sapiens].
Length = 260
Score = 332 bits (851), Expect = 5e-91
Identities = 152/260 (58%), Positives = 187/260 (71%)
Frame = +2
Query: 50 MAKEWGYAAHNGPDHWHELYPIAKGDNQSPIELHTKDIKHDPSLLPWTASYDPGSAKTIL 229
M+ WGY HNGP+HWH+ +PIAKG+ QSP+++ T K+DPSL P + SYD ++ IL
Sbjct: 1 MSHHWGYGKHNGPEHWHKDFPIAKGERQSPVDIDTHTAKYDPSLKPLSVSYDQATSLRIL 60
Query: 230 NNGKTCRVVFDDTYDRSMLRGGPLTAAYRLRQFHLHWGSSDDHGSEHTVDGVKYAAELHL 409
NNG V FDD+ D+++L+GGPL YRL QFH HWGS D GSEHTVD KYAAELHL
Sbjct: 61 NNGHAFNVEFDDSQDKAVLKGGPLDGTYRLIQFHFHWGSLDGQGSEHTVDKKKYAAELHL 120
Query: 410 VHWNSKYNSFATALKHPDGVAVVGIFLKIGREKGEFQLVLDALDKIKTKGKEAPFTNFNP 589
VHWN+KY F A++ PDG+AV+GIFLK+G K Q V+D LD IKTKGK A FTNF+P
Sbjct: 121 VHWNTKYGDFGKAVQQPDGLAVLGIFLKVGSAKPGLQKVVDVLDSIKTKGKSADFTNFDP 180
Query: 590 SCLFPACRDYWTYHGSFTTPPCEECIVWLLLKEPITVSSDQMAKLRSLYSSAENEPPVPL 769
L P DYWTY GS TTPP EC+ W++LKEPI+VSS+Q+ K R L + E EP +
Sbjct: 181 RGLLPESLDYWTYPGSLTTPPLLECVTWIVLKEPISVSSEQVLKFRKLNFNGEGEPEELM 240
Query: 770 VRNWRPPQPIKGRIVKASFK 829
V NWRP QP+K R +KASFK
Sbjct: 241 VDNWRPAQPLKNRQIKASFK 260
>ref|NP_940986.1| carbonic anhydrase 13 [Homo sapiens].
Length = 262
Score = 325 bits (834), Expect = 4e-89
Identities = 154/256 (60%), Positives = 185/256 (72%), Gaps = 1/256 (0%)
Frame = +2
Query: 62 WGYAAHNGPDHWHELYPIAKGDNQSPIELHTKDIKHDPSLLPWTASYDPGSAKTILNNGK 241
WGY HNGP HW E +PIA GD QSPIE+ TK++K+D SL P + YDP SAK I N+G
Sbjct: 6 WGYREHNGPIHWKEFFPIADGDQQSPIEIKTKEVKYDSSLRPLSIKYDPSSAKIISNSGH 65
Query: 242 TCRVVFDDTYDRSMLRGGPLTAAYRLRQFHLHWGSSDDHGSEHTVDGVKYAAELHLVHWN 421
+ V FDDT ++S+LRGGPLT +YRLRQ HLHWGS+DDHGSEH VDGV YAAELH+VHWN
Sbjct: 66 SFNVDFDDTENKSVLRGGPLTGSYRLRQVHLHWGSADDHGSEHIVDGVSYAAELHVVHWN 125
Query: 422 S-KYNSFATALKHPDGVAVVGIFLKIGREKGEFQLVLDALDKIKTKGKEAPFTNFNPSCL 598
S KY SF A PDG+AV+G+FL+IG + Q + D LD IK KGK+ FTNF+ L
Sbjct: 126 SDKYPSFVEAAHEPDGLAVLGVFLQIGEPNSQLQKITDTLDSIKEKGKQTRFTNFDLLSL 185
Query: 599 FPACRDYWTYHGSFTTPPCEECIVWLLLKEPITVSSDQMAKLRSLYSSAENEPPVPLVRN 778
P DYWTY GS T PP E + W++LK+PI +SS Q+AK RSL +AE E LV N
Sbjct: 186 LPPSWDYWTYPGSLTVPPLLESVTWIVLKQPINISSQQLAKFRSLLCTAEGEAAAFLVSN 245
Query: 779 WRPPQPIKGRIVKASF 826
RPPQP+KGR V+ASF
Sbjct: 246 HRPPQPLKGRKVRASF 261
>ref|NP_001158302.1| carbonic anhydrase 1 [Homo sapiens].
Length = 261
Score = 311 bits (796), Expect = 1e-84
Identities = 143/257 (55%), Positives = 189/257 (73%), Gaps = 1/257 (0%)
Frame = +2
Query: 59 EWGYAAHNGPDHWHELYPIAKGDNQSPIELHTKDIKHDPSLLPWTASYDPGSAKTILNNG 238
+WGY NGP+ W +LYPIA G+NQSP+++ T + KHD SL P + SY+P +AK I+N G
Sbjct: 5 DWGYDDKNGPEQWSKLYPIANGNNQSPVDIKTSETKHDTSLKPISVSYNPATAKEIINVG 64
Query: 239 KTCRVVFDDTYDRSMLRGGPLTAAYRLRQFHLHWGSSDDHGSEHTVDGVKYAAELHLVHW 418
+ V F+D +RS+L+GGP + +YRL QFH HWGS+++HGSEHTVDGVKY+AELH+ HW
Sbjct: 65 HSFHVNFEDNDNRSVLKGGPFSDSYRLFQFHFHWGSTNEHGSEHTVDGVKYSAELHVAHW 124
Query: 419 NS-KYNSFATALKHPDGVAVVGIFLKIGREKGEFQLVLDALDKIKTKGKEAPFTNFNPSC 595
NS KY+S A A DG+AV+G+ +K+G + Q VLDAL IKTKGK APFTNF+PS
Sbjct: 125 NSAKYSSLAEAASKADGLAVIGVLMKVGEANPKLQKVLDALQAIKTKGKRAPFTNFDPST 184
Query: 596 LFPACRDYWTYHGSFTTPPCEECIVWLLLKEPITVSSDQMAKLRSLYSSAENEPPVPLVR 775
L P+ D+WTY GS T PP E + W++ KE I+VSS+Q+A+ RSL S+ E + VP+
Sbjct: 185 LLPSSLDFWTYPGSLTHPPLYESVTWIICKESISVSSEQLAQFRSLLSNVEGDNAVPMQH 244
Query: 776 NWRPPQPIKGRIVKASF 826
N RP QP+KGR V+ASF
Sbjct: 245 NNRPTQPLKGRTVRASF 261
>ref|NP_001122303.1| carbonic anhydrase 1 [Homo sapiens].
Length = 261
Score = 311 bits (796), Expect = 1e-84
Identities = 143/257 (55%), Positives = 189/257 (73%), Gaps = 1/257 (0%)
Frame = +2
Query: 59 EWGYAAHNGPDHWHELYPIAKGDNQSPIELHTKDIKHDPSLLPWTASYDPGSAKTILNNG 238
+WGY NGP+ W +LYPIA G+NQSP+++ T + KHD SL P + SY+P +AK I+N G
Sbjct: 5 DWGYDDKNGPEQWSKLYPIANGNNQSPVDIKTSETKHDTSLKPISVSYNPATAKEIINVG 64
Query: 239 KTCRVVFDDTYDRSMLRGGPLTAAYRLRQFHLHWGSSDDHGSEHTVDGVKYAAELHLVHW 418
+ V F+D +RS+L+GGP + +YRL QFH HWGS+++HGSEHTVDGVKY+AELH+ HW
Sbjct: 65 HSFHVNFEDNDNRSVLKGGPFSDSYRLFQFHFHWGSTNEHGSEHTVDGVKYSAELHVAHW 124
Query: 419 NS-KYNSFATALKHPDGVAVVGIFLKIGREKGEFQLVLDALDKIKTKGKEAPFTNFNPSC 595
NS KY+S A A DG+AV+G+ +K+G + Q VLDAL IKTKGK APFTNF+PS
Sbjct: 125 NSAKYSSLAEAASKADGLAVIGVLMKVGEANPKLQKVLDALQAIKTKGKRAPFTNFDPST 184
Query: 596 LFPACRDYWTYHGSFTTPPCEECIVWLLLKEPITVSSDQMAKLRSLYSSAENEPPVPLVR 775
L P+ D+WTY GS T PP E + W++ KE I+VSS+Q+A+ RSL S+ E + VP+
Sbjct: 185 LLPSSLDFWTYPGSLTHPPLYESVTWIICKESISVSSEQLAQFRSLLSNVEGDNAVPMQH 244
Query: 776 NWRPPQPIKGRIVKASF 826
N RP QP+KGR V+ASF
Sbjct: 245 NNRPTQPLKGRTVRASF 261
>ref|NP_001122302.1| carbonic anhydrase 1 [Homo sapiens].
Length = 261
Score = 311 bits (796), Expect = 1e-84
Identities = 143/257 (55%), Positives = 189/257 (73%), Gaps = 1/257 (0%)
Frame = +2
Query: 59 EWGYAAHNGPDHWHELYPIAKGDNQSPIELHTKDIKHDPSLLPWTASYDPGSAKTILNNG 238
+WGY NGP+ W +LYPIA G+NQSP+++ T + KHD SL P + SY+P +AK I+N G
Sbjct: 5 DWGYDDKNGPEQWSKLYPIANGNNQSPVDIKTSETKHDTSLKPISVSYNPATAKEIINVG 64
Query: 239 KTCRVVFDDTYDRSMLRGGPLTAAYRLRQFHLHWGSSDDHGSEHTVDGVKYAAELHLVHW 418
+ V F+D +RS+L+GGP + +YRL QFH HWGS+++HGSEHTVDGVKY+AELH+ HW
Sbjct: 65 HSFHVNFEDNDNRSVLKGGPFSDSYRLFQFHFHWGSTNEHGSEHTVDGVKYSAELHVAHW 124
Query: 419 NS-KYNSFATALKHPDGVAVVGIFLKIGREKGEFQLVLDALDKIKTKGKEAPFTNFNPSC 595
NS KY+S A A DG+AV+G+ +K+G + Q VLDAL IKTKGK APFTNF+PS
Sbjct: 125 NSAKYSSLAEAASKADGLAVIGVLMKVGEANPKLQKVLDALQAIKTKGKRAPFTNFDPST 184
Query: 596 LFPACRDYWTYHGSFTTPPCEECIVWLLLKEPITVSSDQMAKLRSLYSSAENEPPVPLVR 775
L P+ D+WTY GS T PP E + W++ KE I+VSS+Q+A+ RSL S+ E + VP+
Sbjct: 185 LLPSSLDFWTYPGSLTHPPLYESVTWIICKESISVSSEQLAQFRSLLSNVEGDNAVPMQH 244
Query: 776 NWRPPQPIKGRIVKASF 826
N RP QP+KGR V+ASF
Sbjct: 245 NNRPTQPLKGRTVRASF 261
>ref|NP_001122301.1| carbonic anhydrase 1 [Homo sapiens].
Length = 261
Score = 311 bits (796), Expect = 1e-84
Identities = 143/257 (55%), Positives = 189/257 (73%), Gaps = 1/257 (0%)
Frame = +2
Query: 59 EWGYAAHNGPDHWHELYPIAKGDNQSPIELHTKDIKHDPSLLPWTASYDPGSAKTILNNG 238
+WGY NGP+ W +LYPIA G+NQSP+++ T + KHD SL P + SY+P +AK I+N G
Sbjct: 5 DWGYDDKNGPEQWSKLYPIANGNNQSPVDIKTSETKHDTSLKPISVSYNPATAKEIINVG 64
Query: 239 KTCRVVFDDTYDRSMLRGGPLTAAYRLRQFHLHWGSSDDHGSEHTVDGVKYAAELHLVHW 418
+ V F+D +RS+L+GGP + +YRL QFH HWGS+++HGSEHTVDGVKY+AELH+ HW
Sbjct: 65 HSFHVNFEDNDNRSVLKGGPFSDSYRLFQFHFHWGSTNEHGSEHTVDGVKYSAELHVAHW 124
Query: 419 NS-KYNSFATALKHPDGVAVVGIFLKIGREKGEFQLVLDALDKIKTKGKEAPFTNFNPSC 595
NS KY+S A A DG+AV+G+ +K+G + Q VLDAL IKTKGK APFTNF+PS
Sbjct: 125 NSAKYSSLAEAASKADGLAVIGVLMKVGEANPKLQKVLDALQAIKTKGKRAPFTNFDPST 184
Query: 596 LFPACRDYWTYHGSFTTPPCEECIVWLLLKEPITVSSDQMAKLRSLYSSAENEPPVPLVR 775
L P+ D+WTY GS T PP E + W++ KE I+VSS+Q+A+ RSL S+ E + VP+
Sbjct: 185 LLPSSLDFWTYPGSLTHPPLYESVTWIICKESISVSSEQLAQFRSLLSNVEGDNAVPMQH 244
Query: 776 NWRPPQPIKGRIVKASF 826
N RP QP+KGR V+ASF
Sbjct: 245 NNRPTQPLKGRTVRASF 261
>ref|NP_001729.1| carbonic anhydrase 1 [Homo sapiens].
Length = 261
Score = 311 bits (796), Expect = 1e-84
Identities = 143/257 (55%), Positives = 189/257 (73%), Gaps = 1/257 (0%)
Frame = +2
Query: 59 EWGYAAHNGPDHWHELYPIAKGDNQSPIELHTKDIKHDPSLLPWTASYDPGSAKTILNNG 238
+WGY NGP+ W +LYPIA G+NQSP+++ T + KHD SL P + SY+P +AK I+N G
Sbjct: 5 DWGYDDKNGPEQWSKLYPIANGNNQSPVDIKTSETKHDTSLKPISVSYNPATAKEIINVG 64
Query: 239 KTCRVVFDDTYDRSMLRGGPLTAAYRLRQFHLHWGSSDDHGSEHTVDGVKYAAELHLVHW 418
+ V F+D +RS+L+GGP + +YRL QFH HWGS+++HGSEHTVDGVKY+AELH+ HW
Sbjct: 65 HSFHVNFEDNDNRSVLKGGPFSDSYRLFQFHFHWGSTNEHGSEHTVDGVKYSAELHVAHW 124
Query: 419 NS-KYNSFATALKHPDGVAVVGIFLKIGREKGEFQLVLDALDKIKTKGKEAPFTNFNPSC 595
NS KY+S A A DG+AV+G+ +K+G + Q VLDAL IKTKGK APFTNF+PS
Sbjct: 125 NSAKYSSLAEAASKADGLAVIGVLMKVGEANPKLQKVLDALQAIKTKGKRAPFTNFDPST 184
Query: 596 LFPACRDYWTYHGSFTTPPCEECIVWLLLKEPITVSSDQMAKLRSLYSSAENEPPVPLVR 775
L P+ D+WTY GS T PP E + W++ KE I+VSS+Q+A+ RSL S+ E + VP+
Sbjct: 185 LLPSSLDFWTYPGSLTHPPLYESVTWIICKESISVSSEQLAQFRSLLSNVEGDNAVPMQH 244
Query: 776 NWRPPQPIKGRIVKASF 826
N RP QP+KGR V+ASF
Sbjct: 245 NNRPTQPLKGRTVRASF 261
>ref|NP_005173.1| carbonic anhydrase 7 isoform 1 [Homo sapiens].
Length = 264
Score = 291 bits (744), Expect = 1e-78
Identities = 133/257 (51%), Positives = 178/257 (69%), Gaps = 1/257 (0%)
Frame = +2
Query: 62 WGYAAHNGPDHWHELYPIAKGDNQSPIELHTKDIKHDPSLLPWTASYDPGSAKTILNNGK 241
WGY +GP HWH+LYPIA+GD QSPI + + + PSL P SY+ + +I NNG
Sbjct: 7 WGYGQDDGPSHWHKLYPIAQGDRQSPINIISSQAVYSPSLQPLELSYEACMSLSITNNGH 66
Query: 242 TCRVVFDDTYDRSMLRGGPLTAAYRLRQFHLHWGSSDDHGSEHTVDGVKYAAELHLVHWN 421
+ +V F+D+ DR+++ GGPL YRL+QFH HWG D GSEHTVDG + +ELHLVHWN
Sbjct: 67 SVQVDFNDSDDRTVVTGGPLEGPYRLKQFHFHWGKKHDVGSEHTVDGKSFPSELHLVHWN 126
Query: 422 SK-YNSFATALKHPDGVAVVGIFLKIGREKGEFQLVLDALDKIKTKGKEAPFTNFNPSCL 598
+K Y++F A PDG+AVVG+FL+ G E + DAL ++ KG +A F+ FNP CL
Sbjct: 127 AKKYSTFGEAASAPDGLAVVGVFLETGDEHPSMNRLTDALYMVRFKGTKAQFSCFNPKCL 186
Query: 599 FPACRDYWTYHGSFTTPPCEECIVWLLLKEPITVSSDQMAKLRSLYSSAENEPPVPLVRN 778
PA R YWTY GS TTPP E + W++L+EPI +S QM K RSL ++E++ + +V N
Sbjct: 187 LPASRHYWTYPGSLTTPPLSESVTWIVLREPICISERQMGKFRSLLFTSEDDERIHMVNN 246
Query: 779 WRPPQPIKGRIVKASFK 829
+RPPQP+KGR+VKASF+
Sbjct: 247 FRPPQPLKGRVVKASFR 263
>ref|NP_009151.1| carbonic anhydrase 5B, mitochondrial precursor [Homo sapiens].
Length = 317
Score = 243 bits (619), Expect = 4e-64
Identities = 118/270 (43%), Positives = 166/270 (61%), Gaps = 1/270 (0%)
Frame = +2
Query: 23 SRPVPTKTTMAKEWGYAAHNGPDHWHELYPIAKGDNQSPIELHTKDIKHDPSLLPWTASY 202
+RP T K A H W + + GD QSPI + +D +DP L P T SY
Sbjct: 31 ARPCSLYTCTYKTRNRALH---PLWESVDLVPGGDRQSPINIRWRDSVYDPGLKPLTISY 87
Query: 203 DPGSAKTILNNGKTCRVVFDDTYDRSMLRGGPLTAAYRLRQFHLHWGSSDDHGSEHTVDG 382
DP + + NNG + V F+D+ D+S+++GGPL YRL+QFH HWG+ D GSEHTVD
Sbjct: 88 DPATCLHVWNNGYSFLVEFEDSTDKSVIKGGPLEHNYRLKQFHFHWGAIDAWGSEHTVDS 147
Query: 383 VKYAAELHLVHWNS-KYNSFATALKHPDGVAVVGIFLKIGREKGEFQLVLDALDKIKTKG 559
+ AELHLVHWN+ ++ +F A +G+AV+G+FLK+G+ E Q ++D L IK K
Sbjct: 148 KCFPAELHLVHWNAVRFENFEDAALEENGLAVIGVFLKLGKHHKELQKLVDTLPSIKHKD 207
Query: 560 KEAPFTNFNPSCLFPACRDYWTYHGSFTTPPCEECIVWLLLKEPITVSSDQMAKLRSLYS 739
F +F+PSCL P C DYWTY GS TTPP E + W++ K+P+ V DQ+ + R+L
Sbjct: 208 ALVEFGSFDPSCLMPTCPDYWTYSGSLTTPPLSESVTWIIKKQPVEVDHDQLEQFRTLLF 267
Query: 740 SAENEPPVPLVRNWRPPQPIKGRIVKASFK 829
++E E +V N+RP QP+ R V++SF+
Sbjct: 268 TSEGEKEKRMVDNFRPLQPLMNRTVRSSFR 297
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 49,550,219
Number of extensions: 1332297
Number of successful extensions: 4951
Number of sequences better than 1.0e-05: 27
Number of HSP's gapped: 4896
Number of HSP's successfully gapped: 27
Length of query: 432
Length of database: 18,297,164
Length adjustment: 105
Effective length of query: 327
Effective length of database: 14,835,944
Effective search space: 4851353688
Effective search space used: 4851353688
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-001857
(1298 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_031632.2| carbonic anhydrase 3 [Mus musculus]. 523 e-149
Alignment gi|NP_078771.1| carbonic anhydrase 13 [Mus musculus]. 335 4e-92
Alignment gi|NP_001077426.1| carbonic anhydrase 1 [Mus musculus]. 325 6e-89
Alignment gi|NP_033929.2| carbonic anhydrase 1 [Mus musculus]. 325 6e-89
Alignment gi|NP_033931.4| carbonic anhydrase 2 [Mus musculus]. 322 3e-88
Alignment gi|NP_444300.1| carbonic anhydrase 7 [Mus musculus]. 277 1e-74
Alignment gi|NP_851832.2| carbonic anhydrase 5B, mitochondrial precursor ... 249 4e-66
Alignment gi|NP_031634.2| carbonic anhydrase 5A, mitochondrial precursor ... 231 9e-61
Alignment gi|NP_031618.2| carbonic anhydrase-related protein [Mus musculu... 176 3e-44
Alignment gi|NP_035927.1| carbonic anhydrase 14 precursor [Mus musculus]. 161 9e-40
>ref|NP_031632.2| carbonic anhydrase 3 [Mus musculus].
Length = 260
Score = 523 bits (1348), Expect = e-149
Identities = 238/260 (91%), Positives = 252/260 (96%)
Frame = +2
Query: 50 MAKEWGYAAHNGPDHWHELYPIAKGDNQSPIELHTKDIKHDPSLLPWTASYDPGSAKTIL 229
MAKEWGYA+HNGPDHWHELYPIAKGDNQSPIELHTKDIKHDPSL PW+ASYDPGSAKTIL
Sbjct: 1 MAKEWGYASHNGPDHWHELYPIAKGDNQSPIELHTKDIKHDPSLQPWSASYDPGSAKTIL 60
Query: 230 NNGKTCRVVFDDTYDRSMLRGGPLTAAYRLRQFHLHWGSSDDHGSEHTVDGVKYAAELHL 409
NNGKTCRVVFDDTYDRSMLRGGPL+ YRLRQFHLHWGSSDDHGSEHTVDGVKYAAELHL
Sbjct: 61 NNGKTCRVVFDDTYDRSMLRGGPLSGPYRLRQFHLHWGSSDDHGSEHTVDGVKYAAELHL 120
Query: 410 VHWNSKYNSFATALKHPDGVAVVGIFLKIGREKGEFQLVLDALDKIKTKGKEAPFTNFNP 589
VHWN KYN+F ALK PDG+AVVGIFLKIGREKGEFQ++LDALDKIKTKGKEAPFT+F+P
Sbjct: 121 VHWNPKYNTFGEALKQPDGIAVVGIFLKIGREKGEFQILLDALDKIKTKGKEAPFTHFDP 180
Query: 590 SCLFPACRDYWTYHGSFTTPPCEECIVWLLLKEPITVSSDQMAKLRSLYSSAENEPPVPL 769
SCLFPACRDYWTYHGSFTTPPCEECIVWLLLKEP+TVSSDQMAKLRSL+SSAENEPPVPL
Sbjct: 181 SCLFPACRDYWTYHGSFTTPPCEECIVWLLLKEPMTVSSDQMAKLRSLFSSAENEPPVPL 240
Query: 770 VRNWRPPQPIKGRIVKASFK 829
V NWRPPQP+KGR+V+ASFK
Sbjct: 241 VGNWRPPQPVKGRVVRASFK 260
>ref|NP_078771.1| carbonic anhydrase 13 [Mus musculus].
Length = 262
Score = 335 bits (860), Expect = 4e-92
Identities = 156/256 (60%), Positives = 191/256 (74%), Gaps = 1/256 (0%)
Frame = +2
Query: 62 WGYAAHNGPDHWHELYPIAKGDNQSPIELHTKDIKHDPSLLPWTASYDPGSAKTILNNGK 241
WGY HNGP HW+EL+PIA GD QSPIE+ TK++K+D SL P + YDP SAK I N+G
Sbjct: 6 WGYGEHNGPIHWNELFPIADGDQQSPIEIKTKEVKYDSSLRPLSIKYDPASAKIISNSGH 65
Query: 242 TCRVVFDDTYDRSMLRGGPLTAAYRLRQFHLHWGSSDDHGSEHTVDGVKYAAELHLVHWN 421
+ V FDDT D+S+LRGGPLT YRLRQFHLHWGS+DDHGSEH VDGV+YAAELH+VHWN
Sbjct: 66 SFNVDFDDTEDKSVLRGGPLTGNYRLRQFHLHWGSADDHGSEHVVDGVRYAAELHVVHWN 125
Query: 422 S-KYNSFATALKHPDGVAVVGIFLKIGREKGEFQLVLDALDKIKTKGKEAPFTNFNPSCL 598
S KY SF A DG+AV+G+FL+IG + Q + D LD IK KGK+ FTNF+P CL
Sbjct: 126 SDKYPSFVEAAHESDGLAVLGVFLQIGEHNPQLQKITDILDSIKEKGKQTRFTNFDPLCL 185
Query: 599 FPACRDYWTYHGSFTTPPCEECIVWLLLKEPITVSSDQMAKLRSLYSSAENEPPVPLVRN 778
P+ DYWTY GS T PP E + W++LK+PI++SS Q+A+ RSL +AE E L+ N
Sbjct: 186 LPSSWDYWTYPGSLTVPPLLESVTWIVLKQPISISSQQLARFRSLLCTAEGESAAFLLSN 245
Query: 779 WRPPQPIKGRIVKASF 826
RPPQP+KGR V+ASF
Sbjct: 246 HRPPQPLKGRRVRASF 261
>ref|NP_001077426.1| carbonic anhydrase 1 [Mus musculus].
Length = 261
Score = 325 bits (832), Expect = 6e-89
Identities = 145/257 (56%), Positives = 194/257 (75%), Gaps = 1/257 (0%)
Frame = +2
Query: 59 EWGYAAHNGPDHWHELYPIAKGDNQSPIELHTKDIKHDPSLLPWTASYDPGSAKTILNNG 238
+WGY + NGPD W +LYPIA G+NQSPI++ T + HD SL P + SY+P +AK I+N G
Sbjct: 5 DWGYGSENGPDQWSKLYPIANGNNQSPIDIKTSEANHDSSLKPLSISYNPATAKEIVNVG 64
Query: 239 KTCRVVFDDTYDRSMLRGGPLTAAYRLRQFHLHWGSSDDHGSEHTVDGVKYAAELHLVHW 418
+ V+FDD+ ++S+L+GGPL +YRL QFH HWG+S+DHGSEHTVDG +Y+ ELHLVHW
Sbjct: 65 HSFHVIFDDSSNQSVLKGGPLADSYRLTQFHFHWGNSNDHGSEHTVDGTRYSGELHLVHW 124
Query: 419 NS-KYNSFATALKHPDGVAVVGIFLKIGREKGEFQLVLDALDKIKTKGKEAPFTNFNPSC 595
NS KY+S + A+ DG+A++G+ +K+G Q VLDAL+ +KTKGK APFTNF+PS
Sbjct: 125 NSAKYSSASEAISKADGLAILGVLMKVGPANPSLQKVLDALNSVKTKGKRAPFTNFDPSS 184
Query: 596 LFPACRDYWTYHGSFTTPPCEECIVWLLLKEPITVSSDQMAKLRSLYSSAENEPPVPLVR 775
L P+ DYWTY GS T PP E + W++ K+ I++S +Q+A+LR L SSAE EP VP++
Sbjct: 185 LLPSSLDYWTYFGSLTHPPLHESVTWVICKDSISLSPEQLAQLRGLLSSAEGEPAVPVLS 244
Query: 776 NWRPPQPIKGRIVKASF 826
N RPPQP+KGR V+ASF
Sbjct: 245 NHRPPQPLKGRTVRASF 261
>ref|NP_033929.2| carbonic anhydrase 1 [Mus musculus].
Length = 261
Score = 325 bits (832), Expect = 6e-89
Identities = 145/257 (56%), Positives = 194/257 (75%), Gaps = 1/257 (0%)
Frame = +2
Query: 59 EWGYAAHNGPDHWHELYPIAKGDNQSPIELHTKDIKHDPSLLPWTASYDPGSAKTILNNG 238
+WGY + NGPD W +LYPIA G+NQSPI++ T + HD SL P + SY+P +AK I+N G
Sbjct: 5 DWGYGSENGPDQWSKLYPIANGNNQSPIDIKTSEANHDSSLKPLSISYNPATAKEIVNVG 64
Query: 239 KTCRVVFDDTYDRSMLRGGPLTAAYRLRQFHLHWGSSDDHGSEHTVDGVKYAAELHLVHW 418
+ V+FDD+ ++S+L+GGPL +YRL QFH HWG+S+DHGSEHTVDG +Y+ ELHLVHW
Sbjct: 65 HSFHVIFDDSSNQSVLKGGPLADSYRLTQFHFHWGNSNDHGSEHTVDGTRYSGELHLVHW 124
Query: 419 NS-KYNSFATALKHPDGVAVVGIFLKIGREKGEFQLVLDALDKIKTKGKEAPFTNFNPSC 595
NS KY+S + A+ DG+A++G+ +K+G Q VLDAL+ +KTKGK APFTNF+PS
Sbjct: 125 NSAKYSSASEAISKADGLAILGVLMKVGPANPSLQKVLDALNSVKTKGKRAPFTNFDPSS 184
Query: 596 LFPACRDYWTYHGSFTTPPCEECIVWLLLKEPITVSSDQMAKLRSLYSSAENEPPVPLVR 775
L P+ DYWTY GS T PP E + W++ K+ I++S +Q+A+LR L SSAE EP VP++
Sbjct: 185 LLPSSLDYWTYFGSLTHPPLHESVTWVICKDSISLSPEQLAQLRGLLSSAEGEPAVPVLS 244
Query: 776 NWRPPQPIKGRIVKASF 826
N RPPQP+KGR V+ASF
Sbjct: 245 NHRPPQPLKGRTVRASF 261
>ref|NP_033931.4| carbonic anhydrase 2 [Mus musculus].
Length = 260
Score = 322 bits (826), Expect = 3e-88
Identities = 147/260 (56%), Positives = 189/260 (72%)
Frame = +2
Query: 50 MAKEWGYAAHNGPDHWHELYPIAKGDNQSPIELHTKDIKHDPSLLPWTASYDPGSAKTIL 229
M+ WGY+ HNGP++WH+ +PIA GD QSP+++ T +HDP+L P SYD ++K+I+
Sbjct: 1 MSHHWGYSKHNGPENWHKDFPIANGDRQSPVDIDTATAQHDPALQPLLISYDKAASKSIV 60
Query: 230 NNGKTCRVVFDDTYDRSMLRGGPLTAAYRLRQFHLHWGSSDDHGSEHTVDGVKYAAELHL 409
NNG + V FDD+ D ++L+GGPL+ +YRL QFH HWGSSD GSEHTV+ KYAAELHL
Sbjct: 61 NNGHSFNVEFDDSQDNAVLKGGPLSDSYRLIQFHFHWGSSDGQGSEHTVNKKKYAAELHL 120
Query: 410 VHWNSKYNSFATALKHPDGVAVVGIFLKIGREKGEFQLVLDALDKIKTKGKEAPFTNFNP 589
VHWN+KY F A++ PDG+AV+GIFLKIG Q VL+AL IKTKGK A F NF+P
Sbjct: 121 VHWNTKYGDFGKAVQQPDGLAVLGIFLKIGPASQGLQKVLEALHSIKTKGKRAAFANFDP 180
Query: 590 SCLFPACRDYWTYHGSFTTPPCEECIVWLLLKEPITVSSDQMAKLRSLYSSAENEPPVPL 769
L P DYWTY GS TTPP EC+ W++L+EPITVSS+QM+ R+L + E + +
Sbjct: 181 CSLLPGNLDYWTYPGSLTTPPLLECVTWIVLREPITVSSEQMSHFRTLNFNEEGDAEEAM 240
Query: 770 VRNWRPPQPIKGRIVKASFK 829
V NWRP QP+K R +KASFK
Sbjct: 241 VDNWRPAQPLKNRKIKASFK 260
>ref|NP_444300.1| carbonic anhydrase 7 [Mus musculus].
Length = 264
Score = 277 bits (709), Expect = 1e-74
Identities = 128/257 (49%), Positives = 174/257 (67%), Gaps = 1/257 (0%)
Frame = +2
Query: 62 WGYAAHNGPDHWHELYPIAKGDNQSPIELHTKDIKHDPSLLPWTASYDPGSAKTILNNGK 241
WGY +GP +WH+LYPIA+GD QSPI + + + PSL P Y+ + +I NNG
Sbjct: 7 WGYGQDDGPSNWHKLYPIAQGDRQSPINIISSQAVYSPSLQPLELFYEACMSLSITNNGH 66
Query: 242 TCRVVFDDTYDRSMLRGGPLTAAYRLRQFHLHWGSSDDHGSEHTVDGVKYAAELHLVHWN 421
+ +V F+D+ DR+++ GGPL YRL+Q H HWG D GSEHTVDG + +ELHLVHWN
Sbjct: 67 SVQVDFNDSDDRTVVSGGPLEGPYRLKQLHFHWGKKRDMGSEHTVDGKSFPSELHLVHWN 126
Query: 422 SK-YNSFATALKHPDGVAVVGIFLKIGREKGEFQLVLDALDKIKTKGKEAPFTNFNPSCL 598
+K Y++F A PDG+AVVG+FL+ G E + DAL ++ K +A F+ FNP CL
Sbjct: 127 AKKYSTFGEAAAAPDGLAVVGVFLETGDEHPSMNRLTDALYMVRFKDTKAQFSCFNPKCL 186
Query: 599 FPACRDYWTYHGSFTTPPCEECIVWLLLKEPITVSSDQMAKLRSLYSSAENEPPVPLVRN 778
P R YWTY GS TTPP E + W++L+EPI +S QM K RSL ++E++ + +V N
Sbjct: 187 LPTSRHYWTYPGSLTTPPLSESVTWIVLREPIRISERQMEKFRSLLFTSEDDERIHMVDN 246
Query: 779 WRPPQPIKGRIVKASFK 829
+RPPQP+KGR+VKASF+
Sbjct: 247 FRPPQPLKGRVVKASFQ 263
>ref|NP_851832.2| carbonic anhydrase 5B, mitochondrial precursor [Mus musculus].
Length = 317
Score = 249 bits (635), Expect = 4e-66
Identities = 123/271 (45%), Positives = 166/271 (61%), Gaps = 3/271 (1%)
Frame = +2
Query: 26 RPVPTKTTMAKEWGYAAHNG--PDHWHELYPIAKGDNQSPIELHTKDIKHDPSLLPWTAS 199
R VP ++ Y N P W L + GD QSPI + +D +DP L P T S
Sbjct: 27 RLVPRRSCSLYTCTYRTRNRALPPLWENLDLVPAGDRQSPINIRWRDSVYDPGLKPLTIS 86
Query: 200 YDPGSAKTILNNGKTCRVVFDDTYDRSMLRGGPLTAAYRLRQFHLHWGSSDDHGSEHTVD 379
YDP + I NNG + V F+D+ D+S++ GGPL YRL+QFH HWG+ D GSEHTVD
Sbjct: 87 YDPATCLHIWNNGYSFLVEFEDSTDKSVVEGGPLEHNYRLKQFHFHWGAIDAWGSEHTVD 146
Query: 380 GVKYAAELHLVHWNS-KYNSFATALKHPDGVAVVGIFLKIGREKGEFQLVLDALDKIKTK 556
Y AELHLVHWN+ K+ SF A +G+AV+G+FLK+G+ E Q ++D L IK K
Sbjct: 147 SKCYPAELHLVHWNAVKFESFEDAALEENGLAVIGVFLKLGKHHKELQKLVDTLPSIKHK 206
Query: 557 GKEAPFTNFNPSCLFPACRDYWTYHGSFTTPPCEECIVWLLLKEPITVSSDQMAKLRSLY 736
F +F+PSCL P C DYWTY GS TTPP E + W++ K+P+ V DQ+ + R+L
Sbjct: 207 DTLVEFGSFDPSCLMPTCPDYWTYSGSLTTPPLSESVTWIIKKQPVEVDRDQLEQFRTLL 266
Query: 737 SSAENEPPVPLVRNWRPPQPIKGRIVKASFK 829
++E E +V N+RP QP+ R V++SF+
Sbjct: 267 FTSEGEKEKRMVDNFRPLQPLMNRTVRSSFR 297
>ref|NP_031634.2| carbonic anhydrase 5A, mitochondrial precursor [Mus musculus].
Length = 299
Score = 231 bits (589), Expect = 9e-61
Identities = 110/239 (46%), Positives = 152/239 (63%), Gaps = 1/239 (0%)
Frame = +2
Query: 116 AKGDNQSPIELHTKDIKHDPSLLPWTASYDPGSAKTILNNGKTCRVVFDDTYDRSMLRGG 295
A+G QSPI + KD +DP L P SYD S + + N G +V FDD+ + S + GG
Sbjct: 53 AEGTRQSPINIQWKDSVYDPQLAPLRVSYDAASCRYLWNTGYFFQVEFDDSCEDSGISGG 112
Query: 296 PLTAAYRLRQFHLHWGSSDDHGSEHTVDGVKYAAELHLVHWNS-KYNSFATALKHPDGVA 472
PL YRL+QFH HWG++D+ GSEH VDG Y AELHLVHWNS KY ++ A +G+A
Sbjct: 113 PLGNHYRLKQFHFHWGATDEWGSEHAVDGHTYPAELHLVHWNSTKYENYKKASVGENGLA 172
Query: 473 VVGIFLKIGREKGEFQLVLDALDKIKTKGKEAPFTNFNPSCLFPACRDYWTYHGSFTTPP 652
V+G+FLK+G Q ++D L +++ K + F+PSCL PACRDYWTY GS TTPP
Sbjct: 173 VIGVFLKLGAHHQALQKLVDVLPEVRHKDTQVAMGPFDPSCLLPACRDYWTYPGSLTTPP 232
Query: 653 CEECIVWLLLKEPITVSSDQMAKLRSLYSSAENEPPVPLVRNWRPPQPIKGRIVKASFK 829
E + W++ K P+ VS Q++ R+L S E +V N+RP QP++ R +++SF+
Sbjct: 233 LAESVTWIVQKTPVEVSPSQLSTFRTLLFSGRGEEEDVMVNNYRPLQPLRDRKLRSSFR 291
>ref|NP_031618.2| carbonic anhydrase-related protein [Mus musculus].
Length = 291
Score = 176 bits (447), Expect = 3e-44
Identities = 99/269 (36%), Positives = 150/269 (55%), Gaps = 12/269 (4%)
Frame = +2
Query: 59 EWGYAAHNGPDHWHELYPIAKGDNQSPIELHTKDIKHDPSLLPWTAS--YDPGSAKTILN 232
EWGY G + W ++P A G+ QSPI L++++ ++DPSLL S Y + N
Sbjct: 29 EWGY--EEGVE-WGLVFPDANGEYQSPINLNSREARYDPSLLDVRLSPNYVVCRDCEVTN 85
Query: 233 NGKTCRVVFDDTYDRSMLRGGPLTAA--YRLRQFHLHWGSSDDHGSEHTVDGVKYAAELH 406
+G T +V+ +S+L GGPL + L + HWG + GSEHTV+ + ELH
Sbjct: 86 DGHTIQVILKS---KSVLSGGPLPQGQEFELYEVRFHWGRENQRGSEHTVNFKAFPMELH 142
Query: 407 LVHWNSK-YNSFATALKHPDGVAVVGIFLKIGREKGEFQLVLDALDKIKTKGKEAPFTNF 583
L+HWNS + S A+ P G+A++ +F++IG+E + V + L I+ KGK F
Sbjct: 143 LIHWNSTLFGSIDEAVGKPHGIAIIALFVQIGKEHVGLKAVTEILQDIQYKGKSKTIPCF 202
Query: 584 NPSCLFP--ACRDYWTYHGSFTTPPCEECIVWLLLKEPITVSSDQMAKLRSLYSSAENEP 757
NP+ L P RDYW Y GS T PPC E + W+L + P+T+S Q+ + R L + +
Sbjct: 203 NPNTLLPDPLLRDYWVYEGSLTIPPCSEGVTWILFRYPLTISQMQIEEFRRLRTHVKGAE 262
Query: 758 PVP-----LVRNWRPPQPIKGRIVKASFK 829
V L N+RP QP+ R+++A+F+
Sbjct: 263 LVEGCDGILGDNFRPTQPLSDRVIRAAFQ 291
>ref|NP_035927.1| carbonic anhydrase 14 precursor [Mus musculus].
Length = 337
Score = 161 bits (408), Expect = 9e-40
Identities = 95/262 (36%), Positives = 138/262 (52%), Gaps = 7/262 (2%)
Frame = +2
Query: 62 WGYAAHNGPDHWHELYPIAKGDNQSPIELHTKDIKHDPSL-LPWTASYDPGSAKTI--LN 232
W Y +G DHW YP GD QSPI + T + DP L YD + + N
Sbjct: 22 WTYEGPHGQDHWPTSYPECGGDAQSPINIQTDSVIFDPDLPAVQPHGYDQLGTEPLDLHN 81
Query: 233 NGKTCRVVFDDTYDRSMLRGGPLTAAYRLRQFHLHWGSSDD-HGSEHTVDGVKYAAELHL 409
NG T ++ T L G L Y Q HLHWG GSEH ++ AAELH+
Sbjct: 82 NGHTVQLSLPPT-----LHLGGLPRKYTAAQLHLHWGQRGSLEGSEHQINSEATAAELHV 136
Query: 410 VHWNSK-YNSFATALKHPDGVAVVGIFLKIGR-EKGEFQLVLDALDKIKTKGKEAPFTNF 583
VH++S+ Y+S + A + P G+AV+GI +++G E + +L L +I+ K ++ F
Sbjct: 137 VHYDSQSYSSLSEAAQKPQGLAVLGILIEVGETENPAYDHILSRLHEIRYKDQKTSVPPF 196
Query: 584 NPSCLFPA-CRDYWTYHGSFTTPPCEECIVWLLLKEPITVSSDQMAKLRSLYSSAENEPP 760
+ LFP ++ Y+GS TTPPC + ++W + +S Q+ KL+ SS E +P
Sbjct: 197 SVRELFPQQLEQFFRYNGSLTTPPCYQSVLWTVFNRRAQISMGQLEKLQETLSSTEEDPS 256
Query: 761 VPLVRNWRPPQPIKGRIVKASF 826
PLV+N+R PQP+ R + ASF
Sbjct: 257 EPLVQNYRVPQPLNQRTIFASF 278
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 42,117,328
Number of extensions: 1125036
Number of successful extensions: 3889
Number of sequences better than 1.0e-05: 19
Number of HSP's gapped: 3847
Number of HSP's successfully gapped: 19
Length of query: 432
Length of database: 15,617,559
Length adjustment: 104
Effective length of query: 328
Effective length of database: 12,493,815
Effective search space: 4097971320
Effective search space used: 4097971320
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-001857
(1298 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001008688.1| carbonic anhydrase 3 [Sus scrofa]. 555 e-158
Alignment gi|XP_003355077.1| PREDICTED: carbonic anhydrase 3-like [Sus sc... 471 e-133
Alignment gi|XP_001924218.1| PREDICTED: carbonic anhydrase 1 [Sus scrofa]. 319 2e-87
Alignment gi|XP_001927840.1| PREDICTED: carbonic anhydrase 2 [Sus scrofa]. 318 3e-87
Alignment gi|XP_001924497.2| PREDICTED: carbonic anhydrase 13 [Sus scrofa]. 297 8e-81
Alignment gi|XP_001926850.1| PREDICTED: carbonic anhydrase 5B, mitochondr... 242 4e-64
Alignment gi|XP_003355076.1| PREDICTED: carbonic anhydrase 3-like [Sus sc... 187 1e-47
Alignment gi|XP_001924916.3| PREDICTED: carbonic anhydrase 14-like [Sus s... 159 4e-39
Alignment gi|NP_001137588.1| carbonic anhydrase 6 [Sus scrofa]. 147 1e-35
Alignment gi|XP_003131649.2| PREDICTED: carbonic anhydrase-related protei... 131 7e-31
>ref|NP_001008688.1| carbonic anhydrase 3 [Sus scrofa].
Length = 260
Score = 555 bits (1429), Expect = e-158
Identities = 259/260 (99%), Positives = 259/260 (99%)
Frame = +2
Query: 50 MAKEWGYAAHNGPDHWHELYPIAKGDNQSPIELHTKDIKHDPSLLPWTASYDPGSAKTIL 229
MAKEWGYA HNGPDHWHELYPIAKGDNQSPIELHTKDIKHDPSLLPWTASYDPGSAKTIL
Sbjct: 1 MAKEWGYADHNGPDHWHELYPIAKGDNQSPIELHTKDIKHDPSLLPWTASYDPGSAKTIL 60
Query: 230 NNGKTCRVVFDDTYDRSMLRGGPLTAAYRLRQFHLHWGSSDDHGSEHTVDGVKYAAELHL 409
NNGKTCRVVFDDTYDRSMLRGGPLTAAYRLRQFHLHWGSSDDHGSEHTVDGVKYAAELHL
Sbjct: 61 NNGKTCRVVFDDTYDRSMLRGGPLTAAYRLRQFHLHWGSSDDHGSEHTVDGVKYAAELHL 120
Query: 410 VHWNSKYNSFATALKHPDGVAVVGIFLKIGREKGEFQLVLDALDKIKTKGKEAPFTNFNP 589
VHWNSKYNSFATALKHPDGVAVVGIFLKIGREKGEFQLVLDALDKIKTKGKEAPFTNFNP
Sbjct: 121 VHWNSKYNSFATALKHPDGVAVVGIFLKIGREKGEFQLVLDALDKIKTKGKEAPFTNFNP 180
Query: 590 SCLFPACRDYWTYHGSFTTPPCEECIVWLLLKEPITVSSDQMAKLRSLYSSAENEPPVPL 769
SCLFPACRDYWTYHGSFTTPPCEECIVWLLLKEPITVSSDQMAKLRSLYSSAENEPPVPL
Sbjct: 181 SCLFPACRDYWTYHGSFTTPPCEECIVWLLLKEPITVSSDQMAKLRSLYSSAENEPPVPL 240
Query: 770 VRNWRPPQPIKGRIVKASFK 829
VRNWRPPQPIKGRIVKASFK
Sbjct: 241 VRNWRPPQPIKGRIVKASFK 260
>ref|XP_003355077.1| PREDICTED: carbonic anhydrase 3-like [Sus scrofa].
Length = 260
Score = 471 bits (1213), Expect = e-133
Identities = 217/260 (83%), Positives = 236/260 (90%)
Frame = +2
Query: 50 MAKEWGYAAHNGPDHWHELYPIAKGDNQSPIELHTKDIKHDPSLLPWTASYDPGSAKTIL 229
M+ WGY HNGP+HWH+ +PIAKGD QSP++++T HDP+L P + Y+ +++ I+
Sbjct: 1 MSHHWGYDKHNGPEHWHKDFPIAKGDRQSPVDINTSTAVHDPALKPLSLCYEQATSQRIV 60
Query: 230 NNGKTCRVVFDDTYDRSMLRGGPLTAAYRLRQFHLHWGSSDDHGSEHTVDGVKYAAELHL 409
NNG + V FD + D+ +LRGGPLTAAYRLRQFHLHWGSSDDHGSEHTVDGVKYAAELHL
Sbjct: 61 NNGHSFNVEFDSSQDKGVLRGGPLTAAYRLRQFHLHWGSSDDHGSEHTVDGVKYAAELHL 120
Query: 410 VHWNSKYNSFATALKHPDGVAVVGIFLKIGREKGEFQLVLDALDKIKTKGKEAPFTNFNP 589
VHWNSKYNSFATALKHPDGVAVVGIFLKIGREKGEFQLVLDALDKIKTKGKEAPFTNFNP
Sbjct: 121 VHWNSKYNSFATALKHPDGVAVVGIFLKIGREKGEFQLVLDALDKIKTKGKEAPFTNFNP 180
Query: 590 SCLFPACRDYWTYHGSFTTPPCEECIVWLLLKEPITVSSDQMAKLRSLYSSAENEPPVPL 769
SCLFPACRDYWTYHGSFTTPPCEECIVWLLLKEPITVSSDQMAKLRSLYSSAENEPPVPL
Sbjct: 181 SCLFPACRDYWTYHGSFTTPPCEECIVWLLLKEPITVSSDQMAKLRSLYSSAENEPPVPL 240
Query: 770 VRNWRPPQPIKGRIVKASFK 829
VRNWRPPQPIKGRIVKASFK
Sbjct: 241 VRNWRPPQPIKGRIVKASFK 260
>ref|XP_001924218.1| PREDICTED: carbonic anhydrase 1 [Sus scrofa].
Length = 261
Score = 319 bits (817), Expect = 2e-87
Identities = 147/256 (57%), Positives = 191/256 (74%), Gaps = 1/256 (0%)
Frame = +2
Query: 62 WGYAAHNGPDHWHELYPIAKGDNQSPIELHTKDIKHDPSLLPWTASYDPGSAKTILNNGK 241
WGY GP+HW ++YPIA G+NQSPI++ T + KHD SL P + SY+P +AK I+N G
Sbjct: 6 WGYDGEYGPEHWSKVYPIANGNNQSPIDIKTSETKHDTSLKPISVSYNPATAKEIINVGH 65
Query: 242 TCRVVFDDTYDRSMLRGGPLTAAYRLRQFHLHWGSSDDHGSEHTVDGVKYAAELHLVHWN 421
+ V F+D +RS+L+ GPL+ +YRL QFH HWG +DD+GSEH VDG KY+AELH+VHWN
Sbjct: 66 SFHVNFEDNDNRSVLKDGPLSESYRLLQFHFHWGKTDDYGSEHLVDGAKYSAELHIVHWN 125
Query: 422 S-KYNSFATALKHPDGVAVVGIFLKIGREKGEFQLVLDALDKIKTKGKEAPFTNFNPSCL 598
S KY+S A A H DG+A++G+ +K+G+ Q VLDAL IK KGK+APFTNF+PS L
Sbjct: 126 SAKYSSAAEAASHADGLAIIGVLVKVGQANPNLQKVLDALKGIKYKGKKAPFTNFDPSVL 185
Query: 599 FPACRDYWTYHGSFTTPPCEECIVWLLLKEPITVSSDQMAKLRSLYSSAENEPPVPLVRN 778
P+ DYWTY GS T PP E + W++LKE I++SSDQ+A+ RSL S+AE + VP+ N
Sbjct: 186 LPSSLDYWTYFGSLTHPPLHESVNWIILKENISISSDQLAQFRSLLSNAEGDKDVPIKHN 245
Query: 779 WRPPQPIKGRIVKASF 826
RPPQP+KGRIVKASF
Sbjct: 246 NRPPQPLKGRIVKASF 261
>ref|XP_001927840.1| PREDICTED: carbonic anhydrase 2 [Sus scrofa].
Length = 260
Score = 318 bits (816), Expect = 3e-87
Identities = 143/260 (55%), Positives = 183/260 (70%)
Frame = +2
Query: 50 MAKEWGYAAHNGPDHWHELYPIAKGDNQSPIELHTKDIKHDPSLLPWTASYDPGSAKTIL 229
M+ WGY HNGP+HWH+ +PIAKGD QSP++++T HDP+L P + Y+ +++ I+
Sbjct: 1 MSHHWGYDKHNGPEHWHKDFPIAKGDRQSPVDINTSTAVHDPALKPLSLCYEQATSQRIV 60
Query: 230 NNGKTCRVVFDDTYDRSMLRGGPLTAAYRLRQFHLHWGSSDDHGSEHTVDGVKYAAELHL 409
NNG + V FD + D+ +L GGPL YRL QFH HWGSSD GSEHTVD KYAAELHL
Sbjct: 61 NNGHSFNVEFDSSQDKGVLEGGPLAGTYRLIQFHFHWGSSDGQGSEHTVDKKKYAAELHL 120
Query: 410 VHWNSKYNSFATALKHPDGVAVVGIFLKIGREKGEFQLVLDALDKIKTKGKEAPFTNFNP 589
VHWN+KY F A + PDG+AV+G+FLKIG + Q ++D LD IKTKGK FT F+P
Sbjct: 121 VHWNTKYKDFGEAAQQPDGLAVLGVFLKIGNAQPGLQKIVDVLDSIKTKGKSVEFTGFDP 180
Query: 590 SCLFPACRDYWTYHGSFTTPPCEECIVWLLLKEPITVSSDQMAKLRSLYSSAENEPPVPL 769
L P DYWTY GS TTPP E + W++L+EPI+VSS QM K R+L + E EP P+
Sbjct: 181 RDLLPGSLDYWTYPGSLTTPPLLESVTWIVLREPISVSSGQMMKFRTLNFNKEGEPEHPM 240
Query: 770 VRNWRPPQPIKGRIVKASFK 829
V NWRP QP+K R ++ASF+
Sbjct: 241 VDNWRPTQPLKNRQIRASFQ 260
>ref|XP_001924497.2| PREDICTED: carbonic anhydrase 13 [Sus scrofa].
Length = 243
Score = 297 bits (761), Expect = 8e-81
Identities = 136/222 (61%), Positives = 165/222 (74%), Gaps = 1/222 (0%)
Frame = +2
Query: 62 WGYAAHNGPDHWHELYPIAKGDNQSPIELHTKDIKHDPSLLPWTASYDPGSAKTILNNGK 241
WGY HNGP HW+E +PIA GD QSPIE+ TK++K+D SL P + YDP SAK I N+G
Sbjct: 6 WGYGEHNGPVHWNEFFPIADGDQQSPIEIKTKEVKYDSSLRPLSIKYDPSSAKIISNSGH 65
Query: 242 TCRVVFDDTYDRSMLRGGPLTAAYRLRQFHLHWGSSDDHGSEHTVDGVKYAAELHLVHWN 421
+ V FDDT D+S+LRGGPLT +YRLRQFHLHWGS+DDHGSEH VDGVKYAAELH+VHWN
Sbjct: 66 SFSVDFDDTEDKSVLRGGPLTGSYRLRQFHLHWGSADDHGSEHVVDGVKYAAELHVVHWN 125
Query: 422 S-KYNSFATALKHPDGVAVVGIFLKIGREKGEFQLVLDALDKIKTKGKEAPFTNFNPSCL 598
S KY SF A PDG+AV+G+FL+IG + Q + D LD IK KGK+ FTNF+P L
Sbjct: 126 SDKYPSFVEAAHEPDGLAVLGVFLQIGEHNSQLQKITDILDSIKEKGKQTRFTNFDPLSL 185
Query: 599 FPACRDYWTYHGSFTTPPCEECIVWLLLKEPITVSSDQMAKL 724
P DYWTY GS T PP E + W++LK+PI +SS Q+ +L
Sbjct: 186 LPPSWDYWTYPGSLTVPPLLESVTWIILKQPINISSQQVDQL 227
>ref|XP_001926850.1| PREDICTED: carbonic anhydrase 5B, mitochondrial-like [Sus scrofa].
Length = 317
Score = 242 bits (617), Expect = 4e-64
Identities = 120/273 (43%), Positives = 166/273 (60%), Gaps = 1/273 (0%)
Frame = +2
Query: 11 RESSSRPVPTKTTMAKEWGYAAHNGPDHWHELYPIAKGDNQSPIELHTKDIKHDPSLLPW 190
R S+RP T K H W + G+ QSPI + +D +DP L P
Sbjct: 27 RSMSARPCSLYTCTYKTRNRDLH---PLWESADLVPAGERQSPINIRWRDSVYDPGLKPL 83
Query: 191 TASYDPGSAKTILNNGKTCRVVFDDTYDRSMLRGGPLTAAYRLRQFHLHWGSSDDHGSEH 370
T SYDP + + NNG + V F+D+ D+S++ GGPL YRL+QFH HWG+ D GSEH
Sbjct: 84 TISYDPTTCLHVWNNGYSFLVEFEDSTDKSVIEGGPLEHNYRLKQFHFHWGAIDAWGSEH 143
Query: 371 TVDGVKYAAELHLVHWNS-KYNSFATALKHPDGVAVVGIFLKIGREKGEFQLVLDALDKI 547
TVD Y AELHLVHWN+ K+ +F A + +G+AV+G+FLK+G+ E Q ++D L I
Sbjct: 144 TVDSKCYPAELHLVHWNAVKFENFEDAAQEENGLAVIGVFLKLGKHHKEVQKLVDTLPSI 203
Query: 548 KTKGKEAPFTNFNPSCLFPACRDYWTYHGSFTTPPCEECIVWLLLKEPITVSSDQMAKLR 727
K K F +F+PSCL P C DYWTY GS TTPP E + W++ K+PI V+ DQ+ + R
Sbjct: 204 KHKDTLVEFGSFDPSCLMPTCPDYWTYSGSLTTPPLSESVTWIIKKQPIEVAHDQLEQFR 263
Query: 728 SLYSSAENEPPVPLVRNWRPPQPIKGRIVKASF 826
+L +++ E +V N+RP QP+ R V++SF
Sbjct: 264 TLLFTSKGETEKRMVDNFRPLQPLMNRTVRSSF 296
>ref|XP_003355076.1| PREDICTED: carbonic anhydrase 3-like [Sus scrofa].
Length = 182
Score = 187 bits (475), Expect = 1e-47
Identities = 86/94 (91%), Positives = 86/94 (91%)
Frame = +2
Query: 50 MAKEWGYAAHNGPDHWHELYPIAKGDNQSPIELHTKDIKHDPSLLPWTASYDPGSAKTIL 229
MAKEWGYA HNGPDHWHELYPIAKGDNQSPIELHTKDIKHDPSLLPWTASYDPGSAKTIL
Sbjct: 1 MAKEWGYADHNGPDHWHELYPIAKGDNQSPIELHTKDIKHDPSLLPWTASYDPGSAKTIL 60
Query: 230 NNGKTCRVVFDDTYDRSMLRGGPLTAAYRLRQFH 331
NNGKTCRVVFDDTYDRS LRGGPL AA L H
Sbjct: 61 NNGKTCRVVFDDTYDRSTLRGGPLHAAPSLASHH 94
>ref|XP_001924916.3| PREDICTED: carbonic anhydrase 14-like [Sus scrofa].
Length = 340
Score = 159 bits (401), Expect = 4e-39
Identities = 97/264 (36%), Positives = 140/264 (53%), Gaps = 7/264 (2%)
Frame = +2
Query: 56 KEWGYAAHNGPDHWHELYPIAKGDNQSPIELHTKDIKHDPSLLPWTA-SYD-PGSAKTIL 229
+ W Y +G DHW YP + QSPI + T + DP LLP Y+ PG+ L
Sbjct: 20 QHWTYEGPHGQDHWPASYPECGSNAQSPINIQTDSVTFDPELLPLQPHGYEQPGTEPLDL 79
Query: 230 -NNGKTCRVVFDDTYDRSMLRGGPLTAAYRLRQFHLHWGSSDDHG-SEHTVDGVKYAAEL 403
NNG T + + ++ G L Y Q HLHWG G SEH ++G AAEL
Sbjct: 80 HNNGHTGKNAXQLSLPPTLHLEG-LPRKYVAAQLHLHWGQKGSPGGSEHKINGEATAAEL 138
Query: 404 HLVHWNSK-YNSFATALKHPDGVAVVGIFLKIGR-EKGEFQLVLDALDKIKTKGKEAPFT 577
H+VH++S+ Y S + A + P G+AV+GI +++G E ++ +L L +I+ K +
Sbjct: 139 HIVHYDSESYASLSEAAQQPQGLAVLGILVEVGETENPAYEHILSHLHEIRHKDQRTSVP 198
Query: 578 NFNPSCLFPAC-RDYWTYHGSFTTPPCEECIVWLLLKEPITVSSDQMAKLRSLYSSAENE 754
FN L P ++ Y+GS TTPPC + ++W + +S Q+ KL+ S E E
Sbjct: 199 PFNVRGLLPPLLAQFFRYNGSLTTPPCYQSVLWTVFNRRAQISMGQLEKLQEALFSTEEE 258
Query: 755 PPVPLVRNWRPPQPIKGRIVKASF 826
P LV+N+R PQP+ RIV ASF
Sbjct: 259 PSQLLVQNYRAPQPLNQRIVLASF 282
>ref|NP_001137588.1| carbonic anhydrase 6 [Sus scrofa].
Length = 317
Score = 147 bits (372), Expect = 1e-35
Identities = 92/283 (32%), Positives = 145/283 (51%), Gaps = 8/283 (2%)
Frame = +2
Query: 41 KTTMAKEWGYAAHNGPD-HWHELYPIAKGDNQSPIELHTKDIKHDPSL--LPWTASYDPG 211
+T EW Y+ + HW YP G QSPI++ K ++++P+L L T
Sbjct: 16 QTQHGAEWTYSDGELDEAHWSREYPDCDGRRQSPIDVQRKSVQYNPALRALSLTGYEAQE 75
Query: 212 SAKTILNNGKTCRVVFDDTYDRSMLRGGPLTAAYRLRQFHLHWGS--SDDHGSEHTVDGV 385
+++NNG T ++ T M P Y +Q H HWG S+ GSEHT+DG+
Sbjct: 76 GEFSMINNGHTVQISLPST----MRLTAPDGTQYIAKQMHFHWGGAFSEISGSEHTIDGI 131
Query: 386 KYAAELHLVHWNSKYNSFATALKHPDGVAVVGIFLKIG--REKGEFQLVLDALDKIKTKG 559
+Y E+H+VH+NSKY S+ A PDG+AV+ +I E + + L I+ G
Sbjct: 132 RYVTEVHVVHYNSKYKSYDEAQTAPDGLAVLAALFEIKDYAENTYYSDFISHLKNIRIPG 191
Query: 560 KEAPFTNFNPSCLFPA-CRDYWTYHGSFTTPPCEECIVWLLLKEPITVSSDQMAKLRSLY 736
+ ++ N + P Y++Y GS TTPPC E + W +L + + +S Q+ KL+
Sbjct: 192 QTTVLSSLNLQDMLPENLHSYYSYQGSLTTPPCTENVHWFVLADTVKLSRTQVWKLQ--- 248
Query: 737 SSAENEPPVPLVRNWRPPQPIKGRIVKASFK*GCWSLPSSGKE 865
+S N+ + ++R QP+ R+V+A+FK SLP+ E
Sbjct: 249 NSLLNDQNKTIHNDYRRTQPLNHRVVEANFK----SLPNPRSE 287
>ref|XP_003131649.2| PREDICTED: carbonic anhydrase-related protein 10-like [Sus scrofa].
Length = 328
Score = 131 bits (330), Expect = 7e-31
Identities = 75/241 (31%), Positives = 124/241 (51%), Gaps = 7/241 (2%)
Frame = +2
Query: 122 GDNQSPIELHTKDIKHDPSLLPWTASYDPGSAK---TILNNGKTCRVVFDDTYDRSMLRG 292
G QSP+ + T + DP L P + G K T+ N G+ + D + + + G
Sbjct: 63 GKRQSPVNIETSHMIFDPFLTP--LRINTGGRKVSGTMYNTGRHVSLRLDKEHLVN-ISG 119
Query: 293 GPLTAAYRLRQFHLHWGSSDDHGSEHTVDGVKYAAELHLVHWNSK-YNSFATALKHPDGV 469
GP+T ++RL + LH+GS D GSEH ++G ++ E+ L+H+N + Y + A K P+G+
Sbjct: 120 GPMTYSHRLEEIRLHFGSEDSQGSEHLLNGQAFSGEVQLIHYNHELYTNVTEAAKSPNGL 179
Query: 470 AVVGIFLKIGREKGEF---QLVLDALDKIKTKGKEAPFTNFNPSCLFPACRDYWTYHGSF 640
VV IF+K+ F L D + +I K N L+P + TY GS
Sbjct: 180 VVVSIFIKVSDSSNPFLNRMLNRDTITRITYKNDAYLLQGLNIEELYPETSSFITYDGSM 239
Query: 641 TTPPCEECIVWLLLKEPITVSSDQMAKLRSLYSSAENEPPVPLVRNWRPPQPIKGRIVKA 820
T PPC E W+++ +P+ ++ QM LR L + ++ + + N+RP QP+ R ++
Sbjct: 240 TIPPCYETASWIIMNKPVYITRMQMHSLRLLSQNQPSQIFLSMSDNFRPVQPLNNRCIRT 299
Query: 821 S 823
+
Sbjct: 300 N 300
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 31,058,458
Number of extensions: 842019
Number of successful extensions: 3210
Number of sequences better than 1.0e-05: 17
Number of HSP's gapped: 3172
Number of HSP's successfully gapped: 17
Length of query: 432
Length of database: 11,343,932
Length adjustment: 102
Effective length of query: 330
Effective length of database: 8,804,438
Effective search space: 2905464540
Effective search space used: 2905464540
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-001857
(1298 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr04 658 0.0
>Sscrofa_Chr04
|| Length = 143465943
Score = 658 bits (332), Expect = 0.0
Identities = 332/332 (100%)
Strand = Plus / Minus
Query: 710 cagatggccaagctgcgaagcctctactccagtgcggagaacgagccccctgtcccccta 769
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56191374 cagatggccaagctgcgaagcctctactccagtgcggagaacgagccccctgtcccccta 56191315
Query: 770 gtgaggaactggcgccccccacagcctatcaagggcaggatagtgaaggcctccttcaaa 829
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56191314 gtgaggaactggcgccccccacagcctatcaagggcaggatagtgaaggcctccttcaaa 56191255
Query: 830 tgaggctgctggagcttgccctcttcaggaaaggaaacctgctactgcagagcttggttc 889
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56191254 tgaggctgctggagcttgccctcttcaggaaaggaaacctgctactgcagagcttggttc 56191195
Query: 890 cttgcctccttttggtgctccttattccaagtattatttcagttttccacactgagcaat 949
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56191194 cttgcctccttttggtgctccttattccaagtattatttcagttttccacactgagcaat 56191135
Query: 950 gaaggtgagagctgcaatcaccaagaaccaaagttactattgacagatctaatacgaaag 1009
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56191134 gaaggtgagagctgcaatcaccaagaaccaaagttactattgacagatctaatacgaaag 56191075
Query: 1010 catttggcctttgtaagaatcatctttcctgt 1041
||||||||||||||||||||||||||||||||
Sbjct: 56191074 catttggcctttgtaagaatcatctttcctgt 56191043
Score = 371 bits (187), Expect = e-100
Identities = 196/199 (98%)
Strand = Plus / Minus
Query: 83 ggtcctgaccactggcatgaactctacccaattgccaagggagacaaccaatcgcccatt 142
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 56199954 ggtcctgaccactggcatgaactttacccaattgccaagggagacaaccaatcgcccatt 56199895
Query: 143 gaactgcacactaaggacatcaagcacgacccttctctgctgccctggacagcatcttat 202
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 56199894 gaactgcacactaaggacatcaagcatgacccttctctgctgccctggacagcatcttat 56199835
Query: 203 gaccccggctctgccaagaccatcctgaacaatgggaagacctgcagggttgtatttgat 262
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56199834 gaccctggctctgccaagaccatcctgaacaatgggaagacctgcagggttgtatttgat 56199775
Query: 263 gatacttatgacaggtcaa 281
|||||||||||||||||||
Sbjct: 56199774 gatacttatgacaggtcaa 56199756
Score = 313 bits (158), Expect = 1e-82
Identities = 158/158 (100%)
Strand = Plus / Minus
Query: 555 agggcaaggaggcacccttcacgaacttcaacccatcctgcctgttccctgcctgccggg 614
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56192505 agggcaaggaggcacccttcacgaacttcaacccatcctgcctgttccctgcctgccggg 56192446
Query: 615 actactggacctaccatggctccttcaccacgccgccctgcgaggagtgcattgtgtggc 674
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56192445 actactggacctaccatggctccttcaccacgccgccctgcgaggagtgcattgtgtggc 56192386
Query: 675 tcctgctgaaggagcccatcaccgtgagctctgaccag 712
||||||||||||||||||||||||||||||||||||||
Sbjct: 56192385 tcctgctgaaggagcccatcaccgtgagctctgaccag 56192348
Score = 311 bits (157), Expect = 5e-82
Identities = 189/197 (95%), Gaps = 2/197 (1%)
Strand = Plus / Minus
Query: 1104 tggctgttggacgccattttgtgtcatcttaaatttcgcacaacttcagtttttactctt 1163
|||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 56190980 tggctgttgggcgccattttgtgtcatcttaaatttcacacaacttcagtttttactctt 56190921
Query: 1164 ttcatgttactagttatcgatcttaaagaaataatgagtaattctatatgaggagtagag 1223
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56190920 ttcatgttactagttatcgatcttaaagaaataatgagtaattctatatgaggagtagag 56190861
Query: 1224 gtatatgaagatcatgtagcaattaccccatagccagaaa-taaaataactgtggacgtc 1282
|||||||||||||||||||||||||| | ||||||||| |||||||||||||||||||
Sbjct: 56190860 gtatatgaagatcatgtagcaattacacataagccagaaattaaaataactgtggacgtc 56190801
Query: 1283 aagaa-tgcaatgatgc 1298
||||| |||||||||||
Sbjct: 56190800 aagaattgcaatgatgc 56190784
Score = 236 bits (119), Expect = 2e-59
Identities = 119/119 (100%)
Strand = Plus / Minus
Query: 282 tgctgagaggtggtcctctcactgcagcctaccggcttcgccagtttcatcttcactggg 341
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56197352 tgctgagaggtggtcctctcactgcagcctaccggcttcgccagtttcatcttcactggg 56197293
Query: 342 gctcctcagatgatcacggatctgagcacactgtggatggagtcaagtatgctgcggag 400
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56197292 gctcctcagatgatcacggatctgagcacactgtggatggagtcaagtatgctgcggag 56197234
Score = 188 bits (95), Expect = 5e-45
Identities = 95/95 (100%)
Strand = Plus / Minus
Query: 399 agctccatttggttcattggaattcaaagtataacagttttgcaactgctctgaagcacc 458
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56195512 agctccatttggttcattggaattcaaagtataacagttttgcaactgctctgaagcacc 56195453
Query: 459 ctgatggagtggctgtagttggcatttttctgaag 493
|||||||||||||||||||||||||||||||||||
Sbjct: 56195452 ctgatggagtggctgtagttggcatttttctgaag 56195418
Score = 161 bits (81), Expect = 1e-36
Identities = 84/85 (98%)
Strand = Plus / Minus
Query: 1 acggcgtggaagagaaagcagcagccgtccagtgcccacgaagacgaccatggccaagga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56200762 acggcgtggaagagaaagcagcagccgtccagtgcccacgaagacgaccatggccaagga 56200703
Query: 61 gtggggctacgccgcccacaatggt 85
|||||||||||||| ||||||||||
Sbjct: 56200702 gtggggctacgccgaccacaatggt 56200678
Score = 131 bits (66), Expect = 1e-27
Identities = 66/66 (100%)
Strand = Plus / Minus
Query: 492 agataggacgtgagaaaggcgagttccaactagtccttgatgcattggacaaaattaaga 551
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56194095 agataggacgtgagaaaggcgagttccaactagtccttgatgcattggacaaaattaaga 56194036
Query: 552 caaagg 557
||||||
Sbjct: 56194035 caaagg 56194030
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 36,476,743
Number of extensions: 215
Number of successful extensions: 215
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 214
Number of HSP's successfully gapped: 8
Length of query: 1298
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 1277
Effective length of database: 2,808,413,156
Effective search space: 3586343600212
Effective search space used: 3586343600212
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)