Animal-Genome cDNA 20110601C-001863

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-001863
         (1415 letters)

Database: RefSeq49_BP.fasta 
           33,088 sequences; 17,681,374 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001015600.1| keratin, type I cytoskeletal 19 [Bos taurus].     589   e-168
Alignment   gi|NP_001124219.1| keratin, type I cytoskeletal 13 [Bos taurus].     444   e-125
Alignment   gi|NP_001098792.1| keratin, type I cytoskeletal 17 [Bos taurus].     443   e-124
Alignment   gi|NP_001160047.1| keratin, type I cytoskeletal 14 [Bos taurus].     441   e-123
Alignment   gi|XP_002696036.1| PREDICTED: keratin 13-like [Bos taurus].          426   e-119
Alignment   gi|XP_002702249.1| PREDICTED: keratin 13-like [Bos taurus].          426   e-119
Alignment   gi|XP_002696056.1| PREDICTED: keratin 12-like [Bos taurus].          385   e-107
Alignment   gi|XP_001255462.1| PREDICTED: keratin 12-like [Bos taurus].          385   e-107
Alignment   gi|XP_001788780.1| PREDICTED: keratin 13-like isoform 2 [Bos ta...   375   e-104
Alignment   gi|NP_776802.1| keratin, type I cytoskeletal 10 [Bos taurus].        374   e-103

>ref|NP_001015600.1| keratin, type I cytoskeletal 19 [Bos taurus].
          Length = 399

 Score =  589 bits (1519), Expect = e-168
 Identities = 314/390 (80%), Positives = 328/390 (84%)
 Frame = +1

Query: 100  FGGLGGGSVRFSAGGAFRAPSIHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 279
            FGG+GGGS+RF AGGAFRAPSIH                                     
Sbjct: 15   FGGMGGGSMRFGAGGAFRAPSIHGGSGGRGVSVSSARFVSSSSGGYGGGYGGALATSDGL 74

Query: 280  XXXXXXXXNEKLTMQNLNDRLASYLEKVRALEQANGDLEVKIRDWYQKQGPGPARDYSHY 459
                    NEKLTMQNLNDRLASYLEKVRALE+ANGDLEVKIRDWYQKQGPGPARDYSHY
Sbjct: 75   LAG-----NEKLTMQNLNDRLASYLEKVRALEEANGDLEVKIRDWYQKQGPGPARDYSHY 129

Query: 460  FKTIEDLRDKILGATIENSKIVLQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVL 639
            FKTIEDLRD+ILGATIENSKIVLQIDNARLAADDFRTKFETEQALR+SVEADINGLRRVL
Sbjct: 130  FKTIEDLRDQILGATIENSKIVLQIDNARLAADDFRTKFETEQALRMSVEADINGLRRVL 189

Query: 640  DELTLARTDLELQIEGLKEELAYLKKNHEEEISALKGQVGGQVSVEVDSAPGIDLAKILS 819
            DELTLARTDLE+QIEGLKEELAYLKKNHEEE+S LKGQVGGQVSVEVDSAPGIDLAKILS
Sbjct: 190  DELTLARTDLEMQIEGLKEELAYLKKNHEEEMSVLKGQVGGQVSVEVDSAPGIDLAKILS 249

Query: 820  DMRSQYEVMAEQNRKDAEAWFTSRTEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIEL 999
            DMRSQYEV+AE+NRKDAEAWF S+TEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIEL
Sbjct: 250  DMRSQYEVIAEKNRKDAEAWFISQTEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIEL 309

Query: 1000 QSQLSMKXXXXXXXXXXXXRFGAQLAQIQALISGIEAQLSDVRADTERQNQEYQHLMDIK 1179
            QSQLSMK            RFGAQLAQIQALISGIEAQLSDVRADTERQNQEYQHLMDIK
Sbjct: 310  QSQLSMKAALEGTLAETEARFGAQLAQIQALISGIEAQLSDVRADTERQNQEYQHLMDIK 369

Query: 1180 TRLEQEIATYRNLLEGQDANYNNLTIIKAL 1269
            TRLEQEIATYRNLLEGQDA +N+L++ KAL
Sbjct: 370  TRLEQEIATYRNLLEGQDAYFNDLSLAKAL 399


>ref|NP_001124219.1| keratin, type I cytoskeletal 13 [Bos taurus].
          Length = 453

 Score =  444 bits (1142), Expect = e-125
 Identities = 225/312 (72%), Positives = 263/312 (84%), Gaps = 1/312 (0%)
 Frame = +1

Query: 304  NEKLTMQNLNDRLASYLEKVRALEQANGDLEVKIRDWYQKQGP-GPARDYSHYFKTIEDL 480
            NEK+TMQNLNDRLASYLEKVRALE+AN DLEVKIRDWYQ+Q P  P RDYS YFKTI++L
Sbjct: 102  NEKITMQNLNDRLASYLEKVRALEEANADLEVKIRDWYQRQSPTSPERDYSPYFKTIDEL 161

Query: 481  RDKILGATIENSKIVLQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVLDELTLAR 660
            RDKIL A I+NS+++L+IDNARLAADDFR K E E ALR SVEADINGLRRVLDELTL +
Sbjct: 162  RDKILAAAIKNSQVILEIDNARLAADDFRLKHENEMALRQSVEADINGLRRVLDELTLTK 221

Query: 661  TDLELQIEGLKEELAYLKKNHEEEISALKGQVGGQVSVEVDSAPGIDLAKILSDMRSQYE 840
            TDLE+QIE L EELAYLKKNHEEE+     Q+ GQV+VE+D+AP +DL ++LS+MR QYE
Sbjct: 222  TDLEMQIESLNEELAYLKKNHEEEMKEFSNQLAGQVNVEMDAAPAVDLTRVLSEMREQYE 281

Query: 841  VMAEQNRKDAEAWFTSRTEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIELQSQLSMK 1020
             MAE+NR+DAEAWF S+TEELN+EVA +TE +Q SKTE+TDLRRT+QGLEIELQSQLSMK
Sbjct: 282  AMAEKNRRDAEAWFFSKTEELNKEVASNTEMIQTSKTEITDLRRTIQGLEIELQSQLSMK 341

Query: 1021 XXXXXXXXXXXXRFGAQLAQIQALISGIEAQLSDVRADTERQNQEYQHLMDIKTRLEQEI 1200
                        R+ AQL QIQ LIS IEAQLS++R++ E QNQEY+ L+DIKTRLEQEI
Sbjct: 342  AGLESTLAETECRYAAQLQQIQGLISSIEAQLSELRSEMECQNQEYKMLLDIKTRLEQEI 401

Query: 1201 ATYRNLLEGQDA 1236
            ATYR+LLEGQD+
Sbjct: 402  ATYRSLLEGQDS 413


>ref|NP_001098792.1| keratin, type I cytoskeletal 17 [Bos taurus].
          Length = 441

 Score =  443 bits (1140), Expect = e-124
 Identities = 222/311 (71%), Positives = 268/311 (86%)
 Frame = +1

Query: 307  EKLTMQNLNDRLASYLEKVRALEQANGDLEVKIRDWYQKQGPGPARDYSHYFKTIEDLRD 486
            EK TMQNLNDRLASYL+KVRALE+AN +LE+KIRDWYQKQ PGPA DYS YFKTIEDLR+
Sbjct: 92   EKATMQNLNDRLASYLDKVRALEEANTELELKIRDWYQKQAPGPAPDYSSYFKTIEDLRN 151

Query: 487  KILGATIENSKIVLQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVLDELTLARTD 666
            KI  AT++N+ ++LQIDNARLAADDFRTKFETEQALR+SVEADINGLRRVLDELTLAR D
Sbjct: 152  KIHTATVDNANLLLQIDNARLAADDFRTKFETEQALRVSVEADINGLRRVLDELTLARAD 211

Query: 667  LELQIEGLKEELAYLKKNHEEEISALKGQVGGQVSVEVDSAPGIDLAKILSDMRSQYEVM 846
            LE+QIE LKEELAYL+KNHEEE+ AL+GQVGG+++VE+D+APG+DL++IL++MR QYE M
Sbjct: 212  LEMQIENLKEELAYLRKNHEEEMKALRGQVGGEINVEMDAAPGVDLSRILNEMRDQYEKM 271

Query: 847  AEQNRKDAEAWFTSRTEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIELQSQLSMKXX 1026
            AE+NRKDAE WF S+TEELNREVA ++E +Q  K+E+++LRRTLQ LEIELQSQLSMK  
Sbjct: 272  AEKNRKDAEDWFFSKTEELNREVATNSELVQSGKSEISELRRTLQALEIELQSQLSMKAS 331

Query: 1027 XXXXXXXXXXRFGAQLAQIQALISGIEAQLSDVRADTERQNQEYQHLMDIKTRLEQEIAT 1206
                      R+  QL+QIQ LI  +E QL+ +R + E+QNQEY+ L+D+KTRLEQEIAT
Sbjct: 332  LEGSLAETENRYCMQLSQIQGLIGSVEEQLAQLRCEMEQQNQEYKILLDVKTRLEQEIAT 391

Query: 1207 YRNLLEGQDAN 1239
            YR LLEG+DA+
Sbjct: 392  YRRLLEGEDAH 402


>ref|NP_001160047.1| keratin, type I cytoskeletal 14 [Bos taurus].
          Length = 477

 Score =  441 bits (1133), Expect = e-123
 Identities = 222/315 (70%), Positives = 270/315 (85%)
 Frame = +1

Query: 304  NEKLTMQNLNDRLASYLEKVRALEQANGDLEVKIRDWYQKQGPGPARDYSHYFKTIEDLR 483
            +EK+TMQNLNDRLASYL+KVRALE+AN DLEVKIRDWYQ+Q P   +DYS YFKTIEDLR
Sbjct: 120  SEKVTMQNLNDRLASYLDKVRALEEANADLEVKIRDWYQRQRPAEIKDYSPYFKTIEDLR 179

Query: 484  DKILGATIENSKIVLQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVLDELTLART 663
            +KIL AT++N+ +VLQIDNARLAADDFRTK+ETE  LRLSVEADINGLRRVLDELTLAR 
Sbjct: 180  NKILTATVDNANVVLQIDNARLAADDFRTKYETELNLRLSVEADINGLRRVLDELTLARA 239

Query: 664  DLELQIEGLKEELAYLKKNHEEEISALKGQVGGQVSVEVDSAPGIDLAKILSDMRSQYEV 843
            DLE+QIE LKEELAYL+KNHEEE+++L+GQVGG V+VE+D+APG+DL++IL++MR QYE 
Sbjct: 240  DLEMQIESLKEELAYLRKNHEEEMNSLRGQVGGDVNVEMDAAPGVDLSRILNEMRDQYEK 299

Query: 844  MAEQNRKDAEAWFTSRTEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIELQSQLSMKX 1023
            MAE+NRKDAE WF S+TEELNREVA ++E +Q  K+E+++LRRTLQ LEIELQSQLSMK 
Sbjct: 300  MAEKNRKDAEDWFFSKTEELNREVATNSELVQSGKSEISELRRTLQNLEIELQSQLSMKA 359

Query: 1024 XXXXXXXXXXXRFGAQLAQIQALISGIEAQLSDVRADTERQNQEYQHLMDIKTRLEQEIA 1203
                       R+  QLAQIQ LIS +E QL+ +R + E+QNQEY+ L+D+KTRLEQEIA
Sbjct: 360  SLENSLEETKGRYCMQLAQIQELISSVEEQLAQLRCEMEQQNQEYKILLDVKTRLEQEIA 419

Query: 1204 TYRNLLEGQDANYNN 1248
            TYR LLEG+DA+ ++
Sbjct: 420  TYRRLLEGEDAHLSS 434


>ref|XP_002696036.1| PREDICTED: keratin 13-like [Bos taurus].
          Length = 434

 Score =  426 bits (1094), Expect = e-119
 Identities = 219/318 (68%), Positives = 258/318 (81%), Gaps = 1/318 (0%)
 Frame = +1

Query: 304  NEKLTMQNLNDRLASYLEKVRALEQANGDLEVKIRDWYQKQGP-GPARDYSHYFKTIEDL 480
            NEK+TMQNLNDRLASYLEKVRALE+AN DLEVKIRDW+ KQ P  P RDYS YFKTI++L
Sbjct: 99   NEKITMQNLNDRLASYLEKVRALEEANADLEVKIRDWHLKQTPTSPERDYSPYFKTIDEL 158

Query: 481  RDKILGATIENSKIVLQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVLDELTLAR 660
            RDKIL ATI+N++I+L+IDNARLAADDFR K+E E  LR SVEADINGLRRVLDELTL +
Sbjct: 159  RDKILAATIDNNRIILEIDNARLAADDFRLKYENELTLRQSVEADINGLRRVLDELTLTK 218

Query: 661  TDLELQIEGLKEELAYLKKNHEEEISALKGQVGGQVSVEVDSAPGIDLAKILSDMRSQYE 840
            TDLE+QIE L EELAYLKKNHEEE+     Q+ GQV+VE+D+ PGIDL ++L++MR QYE
Sbjct: 219  TDLEMQIESLNEELAYLKKNHEEEMKEFSKQMVGQVNVEMDATPGIDLTRVLAEMREQYE 278

Query: 841  VMAEQNRKDAEAWFTSRTEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIELQSQLSMK 1020
             MAE+NR+DAE WF S++ ELN+EV   T  +Q SKTE+T+LRRTLQGLEIELQSQLSMK
Sbjct: 279  AMAEKNRRDAEEWFHSKSAELNKEVTSSTALIQTSKTEITELRRTLQGLEIELQSQLSMK 338

Query: 1021 XXXXXXXXXXXXRFGAQLAQIQALISGIEAQLSDVRADTERQNQEYQHLMDIKTRLEQEI 1200
                        R+  QL QIQ LIS IEAQLS++R++ E QNQEY+ L+DIKTRLEQEI
Sbjct: 339  AGLESTLAETECRYALQLQQIQGLISSIEAQLSELRSEMECQNQEYKMLLDIKTRLEQEI 398

Query: 1201 ATYRNLLEGQDANYNNLT 1254
            ATYR+LLEGQD+     T
Sbjct: 399  ATYRSLLEGQDSKLIGFT 416


>ref|XP_002702249.1| PREDICTED: keratin 13-like [Bos taurus].
          Length = 434

 Score =  426 bits (1094), Expect = e-119
 Identities = 219/318 (68%), Positives = 258/318 (81%), Gaps = 1/318 (0%)
 Frame = +1

Query: 304  NEKLTMQNLNDRLASYLEKVRALEQANGDLEVKIRDWYQKQGP-GPARDYSHYFKTIEDL 480
            NEK+TMQNLNDRLASYLEKVRALE+AN DLEVKIRDW+ KQ P  P RDYS YFKTI++L
Sbjct: 99   NEKITMQNLNDRLASYLEKVRALEEANADLEVKIRDWHLKQTPTSPERDYSPYFKTIDEL 158

Query: 481  RDKILGATIENSKIVLQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVLDELTLAR 660
            RDKIL ATI+N++I+L+IDNARLAADDFR K+E E  LR SVEADINGLRRVLDELTL +
Sbjct: 159  RDKILAATIDNNRIILEIDNARLAADDFRLKYENELTLRQSVEADINGLRRVLDELTLTK 218

Query: 661  TDLELQIEGLKEELAYLKKNHEEEISALKGQVGGQVSVEVDSAPGIDLAKILSDMRSQYE 840
            TDLE+QIE L EELAYLKKNHEEE+     Q+ GQV+VE+D+ PGIDL ++L++MR QYE
Sbjct: 219  TDLEMQIESLNEELAYLKKNHEEEMKEFSKQMVGQVNVEMDATPGIDLTRVLAEMREQYE 278

Query: 841  VMAEQNRKDAEAWFTSRTEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIELQSQLSMK 1020
             MAE+NR+DAE WF S++ ELN+EV   T  +Q SKTE+T+LRRTLQGLEIELQSQLSMK
Sbjct: 279  AMAEKNRRDAEEWFHSKSAELNKEVTSSTALIQTSKTEITELRRTLQGLEIELQSQLSMK 338

Query: 1021 XXXXXXXXXXXXRFGAQLAQIQALISGIEAQLSDVRADTERQNQEYQHLMDIKTRLEQEI 1200
                        R+  QL QIQ LIS IEAQLS++R++ E QNQEY+ L+DIKTRLEQEI
Sbjct: 339  AGLESTLAETECRYALQLQQIQGLISSIEAQLSELRSEMECQNQEYKMLLDIKTRLEQEI 398

Query: 1201 ATYRNLLEGQDANYNNLT 1254
            ATYR+LLEGQD+     T
Sbjct: 399  ATYRSLLEGQDSKLIGFT 416


>ref|XP_002696056.1| PREDICTED: keratin 12-like [Bos taurus].
          Length = 532

 Score =  385 bits (989), Expect = e-107
 Identities = 198/314 (63%), Positives = 244/314 (77%), Gaps = 5/314 (1%)
 Frame = +1

Query: 304  NEKLTMQNLNDRLASYLEKVRALEQANGDLEVKIRDWYQKQG-----PGPARDYSHYFKT 468
            +EK TM+NLNDRLASYL+KVRALE+AN DLE KIR+WY+ +G     PG   DYS Y+  
Sbjct: 161  SEKETMKNLNDRLASYLDKVRALEEANTDLETKIREWYETRGSGTGDPGSQNDYSKYYPL 220

Query: 469  IEDLRDKILGATIENSKIVLQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVLDEL 648
            IEDLR+KI+ A IEN++++LQIDNARLAADDFR K+E E AL  +VEADINGLRRVLDEL
Sbjct: 221  IEDLRNKIISANIENAQLILQIDNARLAADDFRMKYENELALCQNVEADINGLRRVLDEL 280

Query: 649  TLARTDLELQIEGLKEELAYLKKNHEEEISALKGQVGGQVSVEVDSAPGIDLAKILSDMR 828
            TLAR DLE QIE L EELAYLKKNHEEE+ + +    GQVSVE+D+APG+DL ++L+DMR
Sbjct: 281  TLARADLETQIETLNEELAYLKKNHEEELQSCRAGGPGQVSVEMDAAPGVDLTRLLNDMR 340

Query: 829  SQYEVMAEQNRKDAEAWFTSRTEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIELQSQ 1008
            +QYE +AEQNRKDAEAWF  ++ EL +E++ +TEQLQ SK+EVTDLRR LQ LEIELQSQ
Sbjct: 341  AQYETIAEQNRKDAEAWFIEKSGELRKEISSNTEQLQSSKSEVTDLRRALQNLEIELQSQ 400

Query: 1009 LSMKXXXXXXXXXXXXRFGAQLAQIQALISGIEAQLSDVRADTERQNQEYQHLMDIKTRL 1188
            L+MK             +  QL+Q+Q LI  +E QL  VRAD ERQ+ +YQ L+++K RL
Sbjct: 401  LAMKKSLEDSLAETEGDYCGQLSQVQQLIGSLEEQLLQVRADAERQSADYQRLLNVKARL 460

Query: 1189 EQEIATYRNLLEGQ 1230
            E EI TYR LL+G+
Sbjct: 461  ELEIETYRRLLDGE 474


>ref|XP_001255462.1| PREDICTED: keratin 12-like [Bos taurus].
          Length = 532

 Score =  385 bits (989), Expect = e-107
 Identities = 198/314 (63%), Positives = 244/314 (77%), Gaps = 5/314 (1%)
 Frame = +1

Query: 304  NEKLTMQNLNDRLASYLEKVRALEQANGDLEVKIRDWYQKQG-----PGPARDYSHYFKT 468
            +EK TM+NLNDRLASYL+KVRALE+AN DLE KIR+WY+ +G     PG   DYS Y+  
Sbjct: 161  SEKETMKNLNDRLASYLDKVRALEEANTDLETKIREWYETRGSGTGDPGSQNDYSKYYPL 220

Query: 469  IEDLRDKILGATIENSKIVLQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVLDEL 648
            IEDLR+KI+ A IEN++++LQIDNARLAADDFR K+E E AL  +VEADINGLRRVLDEL
Sbjct: 221  IEDLRNKIISANIENAQLILQIDNARLAADDFRMKYENELALCQNVEADINGLRRVLDEL 280

Query: 649  TLARTDLELQIEGLKEELAYLKKNHEEEISALKGQVGGQVSVEVDSAPGIDLAKILSDMR 828
            TLAR DLE QIE L EELAYLKKNHEEE+ + +    GQVSVE+D+APG+DL ++L+DMR
Sbjct: 281  TLARADLETQIETLNEELAYLKKNHEEELQSCRAGGPGQVSVEMDAAPGVDLTRLLNDMR 340

Query: 829  SQYEVMAEQNRKDAEAWFTSRTEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIELQSQ 1008
            +QYE +AEQNRKDAEAWF  ++ EL +E++ +TEQLQ SK+EVTDLRR LQ LEIELQSQ
Sbjct: 341  AQYETIAEQNRKDAEAWFIEKSGELRKEISSNTEQLQSSKSEVTDLRRALQNLEIELQSQ 400

Query: 1009 LSMKXXXXXXXXXXXXRFGAQLAQIQALISGIEAQLSDVRADTERQNQEYQHLMDIKTRL 1188
            L+MK             +  QL+Q+Q LI  +E QL  VRAD ERQ+ +YQ L+++K RL
Sbjct: 401  LAMKKSLEDSLAETEGDYCGQLSQVQQLIGSLEEQLLQVRADAERQSADYQRLLNVKARL 460

Query: 1189 EQEIATYRNLLEGQ 1230
            E EI TYR LL+G+
Sbjct: 461  ELEIETYRRLLDGE 474


>ref|XP_001788780.1| PREDICTED: keratin 13-like isoform 2 [Bos taurus].
          Length = 566

 Score =  375 bits (963), Expect = e-104
 Identities = 188/315 (59%), Positives = 247/315 (78%), Gaps = 3/315 (0%)
 Frame = +1

Query: 304  NEKLTMQNLNDRLASYLEKVRALEQANGDLEVKIRDWYQKQGPG---PARDYSHYFKTIE 474
            NEK+TMQNLNDRLASYL+KVRALE++N +LEVKI++WY+K G       RDYS Y++TI+
Sbjct: 126  NEKITMQNLNDRLASYLDKVRALEESNYELEVKIKEWYEKYGNSRQREPRDYSKYYQTID 185

Query: 475  DLRDKILGATIENSKIVLQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVLDELTL 654
            DL+++I   T +N+ I++Q+DNARLAADDFR K+E E  LR SVEADINGLRRVLDELTL
Sbjct: 186  DLKNQIFNLTTDNANILIQVDNARLAADDFRLKYENEVTLRQSVEADINGLRRVLDELTL 245

Query: 655  ARTDLELQIEGLKEELAYLKKNHEEEISALKGQVGGQVSVEVDSAPGIDLAKILSDMRSQ 834
             +TDLE+QIE L EELAYLKKNHEEE+  L+    G V+VE+++APG+DL ++L++MRSQ
Sbjct: 246  TKTDLEMQIESLTEELAYLKKNHEEEMRDLQNVSTGDVNVEMNAAPGVDLTELLNNMRSQ 305

Query: 835  YEVMAEQNRKDAEAWFTSRTEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIELQSQLS 1014
            YE +AE+NR+DAEAWF  +++EL  E+  + EQ+   K+E+T+LRRT+QGLEIELQSQL+
Sbjct: 306  YEQLAEKNRRDAEAWFNEKSKELTTEINSNLEQVSSHKSEITELRRTIQGLEIELQSQLA 365

Query: 1015 MKXXXXXXXXXXXXRFGAQLAQIQALISGIEAQLSDVRADTERQNQEYQHLMDIKTRLEQ 1194
            +K            R+  QL+QIQ+ IS +E QL  +RA+TE QN EYQ L+DIK RLE 
Sbjct: 366  LKQSLEASLAETEGRYCVQLSQIQSQISSLEEQLQQIRAETECQNAEYQQLLDIKIRLEN 425

Query: 1195 EIATYRNLLEGQDAN 1239
            EI TYR+LLEG+ ++
Sbjct: 426  EIQTYRSLLEGEGSS 440


>ref|NP_776802.1| keratin, type I cytoskeletal 10 [Bos taurus].
          Length = 526

 Score =  374 bits (960), Expect = e-103
 Identities = 187/315 (59%), Positives = 247/315 (78%), Gaps = 3/315 (0%)
 Frame = +1

Query: 304  NEKLTMQNLNDRLASYLEKVRALEQANGDLEVKIRDWYQKQGPG---PARDYSHYFKTIE 474
            N+K+TMQNLNDRLASYL+KVRALE++N +LEVKI++WY+K G       RDYS Y++TI+
Sbjct: 126  NQKITMQNLNDRLASYLDKVRALEESNYELEVKIKEWYEKYGNSRQREPRDYSKYYQTID 185

Query: 475  DLRDKILGATIENSKIVLQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVLDELTL 654
            DL+++I   T +N+ I++Q+DNARLAADDFR K+E E  LR SVEADINGLRRVLDELTL
Sbjct: 186  DLKNQIFNLTTDNANILIQVDNARLAADDFRLKYENEVTLRQSVEADINGLRRVLDELTL 245

Query: 655  ARTDLELQIEGLKEELAYLKKNHEEEISALKGQVGGQVSVEVDSAPGIDLAKILSDMRSQ 834
             +TDLE+QIE L EELAYLKKNHEEE+  L+    G V+VE+++APG+DL ++L++MRSQ
Sbjct: 246  TKTDLEMQIESLTEELAYLKKNHEEEMRDLQNVSTGDVNVEMNAAPGVDLTELLNNMRSQ 305

Query: 835  YEVMAEQNRKDAEAWFTSRTEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIELQSQLS 1014
            YE +AE+NR+DAEAWF  +++EL  E+  + EQ+   K+E+T+LRRT+QGLEIELQSQL+
Sbjct: 306  YEQLAEKNRRDAEAWFNEKSKELTTEINSNLEQVSSHKSEITELRRTIQGLEIELQSQLA 365

Query: 1015 MKXXXXXXXXXXXXRFGAQLAQIQALISGIEAQLSDVRADTERQNQEYQHLMDIKTRLEQ 1194
            +K            R+  QL+QIQ+ IS +E QL  +RA+TE QN EYQ L+DIK RLE 
Sbjct: 366  LKQSLEASLAETEGRYCVQLSQIQSQISSLEEQLQQIRAETECQNAEYQQLLDIKIRLEN 425

Query: 1195 EIATYRNLLEGQDAN 1239
            EI TYR+LLEG+ ++
Sbjct: 426  EIQTYRSLLEGEGSS 440


  Database: RefSeq49_BP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 17,681,374
  Number of sequences in database:  33,088
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 48,502,480
Number of extensions: 1484775
Number of successful extensions: 10492
Number of sequences better than 1.0e-05: 110
Number of HSP's gapped: 10049
Number of HSP's successfully gapped: 112
Length of query: 471
Length of database: 17,681,374
Length adjustment: 106
Effective length of query: 365
Effective length of database: 14,174,046
Effective search space: 5173526790
Effective search space used: 5173526790
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-001863
         (1415 letters)

Database: RefSeq49_CP.fasta 
           33,336 sequences; 18,874,504 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_548099.2| PREDICTED: similar to keratin 17n [Canis famili...   464   e-131
Alignment   gi|XP_862399.1| PREDICTED: similar to keratin 13 isoform a isof...   448   e-126
Alignment   gi|XP_862372.1| PREDICTED: similar to keratin 13 isoform a isof...   448   e-126
Alignment   gi|XP_548100.1| PREDICTED: similar to type I keratin KA17 isofo...   448   e-126
Alignment   gi|XP_548101.2| PREDICTED: similar to Keratin, type I cytoskele...   441   e-124
Alignment   gi|XP_850765.1| PREDICTED: similar to keratin 13 isoform a isof...   426   e-119
Alignment   gi|XP_862344.1| PREDICTED: similar to keratin 13 isoform a isof...   426   e-119
Alignment   gi|XP_548106.2| PREDICTED: similar to keratin 13 isoform a isof...   426   e-119
Alignment   gi|XP_861773.1| PREDICTED: similar to type I keratin KA17 isofo...   402   e-112
Alignment   gi|XP_862293.1| PREDICTED: similar to keratin 13 isoform a isof...   384   e-107

>ref|XP_548099.2| PREDICTED: similar to keratin 17n [Canis familiaris].
          Length = 469

 Score =  464 bits (1195), Expect = e-131
 Identities = 234/312 (75%), Positives = 273/312 (87%)
 Frame = +1

Query: 304  NEKLTMQNLNDRLASYLEKVRALEQANGDLEVKIRDWYQKQGPGPARDYSHYFKTIEDLR 483
            +EK TMQNLNDRLASYL+KVRALE+AN DLEVKI DWY+KQGPGPARDYSH+FKTIE+LR
Sbjct: 110  SEKETMQNLNDRLASYLDKVRALEEANADLEVKIHDWYKKQGPGPARDYSHFFKTIEELR 169

Query: 484  DKILGATIENSKIVLQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVLDELTLART 663
            +KIL ATI+N+ +VLQIDNARLAADDFRTK+ETE  LR+SVEAD NGLRRVLDELTLAR 
Sbjct: 170  NKILAATIDNASLVLQIDNARLAADDFRTKYETELNLRMSVEADTNGLRRVLDELTLARA 229

Query: 664  DLELQIEGLKEELAYLKKNHEEEISALKGQVGGQVSVEVDSAPGIDLAKILSDMRSQYEV 843
            DLE+QIE LKEELAYLKKNHEEE++AL+GQVGG VSVE+D+APG+DL++IL++MR QYE 
Sbjct: 230  DLEMQIESLKEELAYLKKNHEEEMNALRGQVGGDVSVEMDAAPGVDLSRILNEMRDQYEK 289

Query: 844  MAEQNRKDAEAWFTSRTEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIELQSQLSMKX 1023
            MAE+NRKDAE WF S+TEELNREVA +TE LQ S+TE+T+LRR++Q LEIELQSQLSMK 
Sbjct: 290  MAEKNRKDAEDWFFSKTEELNREVATNTEALQSSRTEITELRRSVQNLEIELQSQLSMKA 349

Query: 1024 XXXXXXXXXXXRFGAQLAQIQALISGIEAQLSDVRADTERQNQEYQHLMDIKTRLEQEIA 1203
                       R+GAQLAQ+Q LIS IE QL ++R D ERQNQEYQ L+D+KTRLEQEIA
Sbjct: 350  SLEGSLAETEARYGAQLAQLQGLISSIEQQLGELRCDMERQNQEYQVLLDVKTRLEQEIA 409

Query: 1204 TYRNLLEGQDAN 1239
            TYR LLEG+DA+
Sbjct: 410  TYRRLLEGEDAH 421


>ref|XP_862399.1| PREDICTED: similar to keratin 13 isoform a isoform 7 [Canis
            familiaris].
          Length = 807

 Score =  448 bits (1152), Expect = e-126
 Identities = 225/312 (72%), Positives = 264/312 (84%), Gaps = 1/312 (0%)
 Frame = +1

Query: 304  NEKLTMQNLNDRLASYLEKVRALEQANGDLEVKIRDWYQKQGPG-PARDYSHYFKTIEDL 480
            NEK+TMQNLNDRLASYL+KV ALE+ANGDLEVKIRDWYQKQ P  P RDYS YFKTIE+L
Sbjct: 102  NEKITMQNLNDRLASYLDKVHALEEANGDLEVKIRDWYQKQSPSSPERDYSPYFKTIEEL 161

Query: 481  RDKILGATIENSKIVLQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVLDELTLAR 660
            RDKIL ATI+NS+++L+IDNARLAADDFR K+E E  LR  VEADINGLRRVLDELTLA+
Sbjct: 162  RDKILAATIDNSRVILEIDNARLAADDFRLKYENELTLRQGVEADINGLRRVLDELTLAK 221

Query: 661  TDLELQIEGLKEELAYLKKNHEEEISALKGQVGGQVSVEVDSAPGIDLAKILSDMRSQYE 840
             DLE+QIEGL EELAYLKKNHEEE+     Q+ GQV+VE+D+APG+DL ++L++MR QYE
Sbjct: 222  ADLEMQIEGLNEELAYLKKNHEEEMKEFSSQLAGQVNVEMDAAPGVDLTRVLAEMREQYE 281

Query: 841  VMAEQNRKDAEAWFTSRTEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIELQSQLSMK 1020
             MAE+NR+DAEAWF S+TEELN+EVA +TE +Q SKTE+TDLRRT+QGLEIELQSQLSMK
Sbjct: 282  AMAEKNRRDAEAWFFSKTEELNKEVASNTEMIQTSKTEITDLRRTMQGLEIELQSQLSMK 341

Query: 1021 XXXXXXXXXXXXRFGAQLAQIQALISGIEAQLSDVRADTERQNQEYQHLMDIKTRLEQEI 1200
                        R+  QL QIQ LIS +EAQLS++R++ E QNQEY+ L+DIKTRLEQEI
Sbjct: 342  AGLESSLAETECRYATQLQQIQGLISSLEAQLSELRSEMECQNQEYKTLLDIKTRLEQEI 401

Query: 1201 ATYRNLLEGQDA 1236
            ATYR+LLEGQDA
Sbjct: 402  ATYRSLLEGQDA 413



 Score =  426 bits (1094), Expect = e-119
 Identities = 216/312 (69%), Positives = 260/312 (83%), Gaps = 1/312 (0%)
 Frame = +1

Query: 304  NEKLTMQNLNDRLASYLEKVRALEQANGDLEVKIRDWYQKQGPG-PARDYSHYFKTIEDL 480
            NEK+TMQNLNDRLASYL+KVRALE+AN +LEVKIRDW+ KQ P  P RDYS Y+KTIE+L
Sbjct: 495  NEKITMQNLNDRLASYLDKVRALEEANTELEVKIRDWHLKQSPSSPERDYSPYYKTIEEL 554

Query: 481  RDKILGATIENSKIVLQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVLDELTLAR 660
            RDKIL ATI+N++++L+IDNARLAADDFR K+E E  LR SVEADINGLRRVLDELTL++
Sbjct: 555  RDKILAATIDNNRVILEIDNARLAADDFRLKYENELTLRQSVEADINGLRRVLDELTLSK 614

Query: 661  TDLELQIEGLKEELAYLKKNHEEEISALKGQVGGQVSVEVDSAPGIDLAKILSDMRSQYE 840
            TDLE+QIE L EELAYLKKNHEEE+     Q+ GQV+VE+D+ PGIDL ++L++MR QYE
Sbjct: 615  TDLEMQIESLNEELAYLKKNHEEEMKEFSNQMVGQVNVEMDATPGIDLTRVLAEMREQYE 674

Query: 841  VMAEQNRKDAEAWFTSRTEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIELQSQLSMK 1020
             MAE+NR+DAE WF S++ ELN+EV+ +T  +Q SKTE+T+LRRTLQGLEIELQSQLSMK
Sbjct: 675  AMAEKNRRDAEEWFHSKSAELNKEVSTNTAMIQTSKTEITELRRTLQGLEIELQSQLSMK 734

Query: 1021 XXXXXXXXXXXXRFGAQLAQIQALISGIEAQLSDVRADTERQNQEYQHLMDIKTRLEQEI 1200
                        R+  QL QIQ LIS IEAQLS++R++ E QNQEY+ L+DIKTRLEQEI
Sbjct: 735  AGLESTLADTECRYALQLQQIQGLISSIEAQLSELRSEMECQNQEYKMLLDIKTRLEQEI 794

Query: 1201 ATYRNLLEGQDA 1236
            ATYR+LLEGQDA
Sbjct: 795  ATYRSLLEGQDA 806


>ref|XP_862372.1| PREDICTED: similar to keratin 13 isoform a isoform 6 [Canis
            familiaris].
          Length = 811

 Score =  448 bits (1152), Expect = e-126
 Identities = 225/312 (72%), Positives = 264/312 (84%), Gaps = 1/312 (0%)
 Frame = +1

Query: 304  NEKLTMQNLNDRLASYLEKVRALEQANGDLEVKIRDWYQKQGPG-PARDYSHYFKTIEDL 480
            NEK+TMQNLNDRLASYL+KV ALE+ANGDLEVKIRDWYQKQ P  P RDYS YFKTIE+L
Sbjct: 106  NEKITMQNLNDRLASYLDKVHALEEANGDLEVKIRDWYQKQSPSSPERDYSPYFKTIEEL 165

Query: 481  RDKILGATIENSKIVLQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVLDELTLAR 660
            RDKIL ATI+NS+++L+IDNARLAADDFR K+E E  LR  VEADINGLRRVLDELTLA+
Sbjct: 166  RDKILAATIDNSRVILEIDNARLAADDFRLKYENELTLRQGVEADINGLRRVLDELTLAK 225

Query: 661  TDLELQIEGLKEELAYLKKNHEEEISALKGQVGGQVSVEVDSAPGIDLAKILSDMRSQYE 840
             DLE+QIEGL EELAYLKKNHEEE+     Q+ GQV+VE+D+APG+DL ++L++MR QYE
Sbjct: 226  ADLEMQIEGLNEELAYLKKNHEEEMKEFSSQLAGQVNVEMDAAPGVDLTRVLAEMREQYE 285

Query: 841  VMAEQNRKDAEAWFTSRTEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIELQSQLSMK 1020
             MAE+NR+DAEAWF S+TEELN+EVA +TE +Q SKTE+TDLRRT+QGLEIELQSQLSMK
Sbjct: 286  AMAEKNRRDAEAWFFSKTEELNKEVASNTEMIQTSKTEITDLRRTMQGLEIELQSQLSMK 345

Query: 1021 XXXXXXXXXXXXRFGAQLAQIQALISGIEAQLSDVRADTERQNQEYQHLMDIKTRLEQEI 1200
                        R+  QL QIQ LIS +EAQLS++R++ E QNQEY+ L+DIKTRLEQEI
Sbjct: 346  AGLESSLAETECRYATQLQQIQGLISSLEAQLSELRSEMECQNQEYKTLLDIKTRLEQEI 405

Query: 1201 ATYRNLLEGQDA 1236
            ATYR+LLEGQDA
Sbjct: 406  ATYRSLLEGQDA 417



 Score =  426 bits (1094), Expect = e-119
 Identities = 216/312 (69%), Positives = 260/312 (83%), Gaps = 1/312 (0%)
 Frame = +1

Query: 304  NEKLTMQNLNDRLASYLEKVRALEQANGDLEVKIRDWYQKQGPG-PARDYSHYFKTIEDL 480
            NEK+TMQNLNDRLASYL+KVRALE+AN +LEVKIRDW+ KQ P  P RDYS Y+KTIE+L
Sbjct: 499  NEKITMQNLNDRLASYLDKVRALEEANTELEVKIRDWHLKQSPSSPERDYSPYYKTIEEL 558

Query: 481  RDKILGATIENSKIVLQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVLDELTLAR 660
            RDKIL ATI+N++++L+IDNARLAADDFR K+E E  LR SVEADINGLRRVLDELTL++
Sbjct: 559  RDKILAATIDNNRVILEIDNARLAADDFRLKYENELTLRQSVEADINGLRRVLDELTLSK 618

Query: 661  TDLELQIEGLKEELAYLKKNHEEEISALKGQVGGQVSVEVDSAPGIDLAKILSDMRSQYE 840
            TDLE+QIE L EELAYLKKNHEEE+     Q+ GQV+VE+D+ PGIDL ++L++MR QYE
Sbjct: 619  TDLEMQIESLNEELAYLKKNHEEEMKEFSNQMVGQVNVEMDATPGIDLTRVLAEMREQYE 678

Query: 841  VMAEQNRKDAEAWFTSRTEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIELQSQLSMK 1020
             MAE+NR+DAE WF S++ ELN+EV+ +T  +Q SKTE+T+LRRTLQGLEIELQSQLSMK
Sbjct: 679  AMAEKNRRDAEEWFHSKSAELNKEVSTNTAMIQTSKTEITELRRTLQGLEIELQSQLSMK 738

Query: 1021 XXXXXXXXXXXXRFGAQLAQIQALISGIEAQLSDVRADTERQNQEYQHLMDIKTRLEQEI 1200
                        R+  QL QIQ LIS IEAQLS++R++ E QNQEY+ L+DIKTRLEQEI
Sbjct: 739  AGLESTLADTECRYALQLQQIQGLISSIEAQLSELRSEMECQNQEYKMLLDIKTRLEQEI 798

Query: 1201 ATYRNLLEGQDA 1236
            ATYR+LLEGQDA
Sbjct: 799  ATYRSLLEGQDA 810


>ref|XP_548100.1| PREDICTED: similar to type I keratin KA17 isoform 1 [Canis
            familiaris].
          Length = 433

 Score =  448 bits (1152), Expect = e-126
 Identities = 222/311 (71%), Positives = 271/311 (87%)
 Frame = +1

Query: 307  EKLTMQNLNDRLASYLEKVRALEQANGDLEVKIRDWYQKQGPGPARDYSHYFKTIEDLRD 486
            EK TMQNLNDRLASYL+KVRALE+AN +LEVKIRDWYQKQ PGPARDYSHY++TIEDL++
Sbjct: 84   EKATMQNLNDRLASYLDKVRALEEANTELEVKIRDWYQKQAPGPARDYSHYYQTIEDLKN 143

Query: 487  KILGATIENSKIVLQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVLDELTLARTD 666
            KIL AT++N+ I+LQIDNARLAADDFRTKFETEQALR+SVEAD NGLRRVLDELTL+R D
Sbjct: 144  KILTATVDNANILLQIDNARLAADDFRTKFETEQALRVSVEADTNGLRRVLDELTLSRAD 203

Query: 667  LELQIEGLKEELAYLKKNHEEEISALKGQVGGQVSVEVDSAPGIDLAKILSDMRSQYEVM 846
            LE+QIE LKEELAYL+KNHEEE++AL+GQVGG+++VE+D+APG+DL++ILS+MR QYE M
Sbjct: 204  LEMQIENLKEELAYLRKNHEEEMNALRGQVGGEINVEMDAAPGVDLSRILSEMRDQYEKM 263

Query: 847  AEQNRKDAEAWFTSRTEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIELQSQLSMKXX 1026
            AE+NRKDAE WF S+TEELNREVA ++E +Q  K+E+++LRRT+Q LEIELQSQLSMK  
Sbjct: 264  AEKNRKDAEDWFFSKTEELNREVATNSELVQSGKSEISELRRTVQALEIELQSQLSMKAS 323

Query: 1027 XXXXXXXXXXRFGAQLAQIQALISGIEAQLSDVRADTERQNQEYQHLMDIKTRLEQEIAT 1206
                      R+  QL+QIQ LI  +E QL+ +R + E+QNQEY+ L+D+KTRLEQEIAT
Sbjct: 324  LEGSLAETENRYCVQLSQIQGLIGSVEEQLAQLRCEMEQQNQEYKILLDVKTRLEQEIAT 383

Query: 1207 YRNLLEGQDAN 1239
            YR LLEG+DA+
Sbjct: 384  YRRLLEGEDAH 394


>ref|XP_548101.2| PREDICTED: similar to Keratin, type I cytoskeletal 16 (Cytokeratin
            16) (K16) (CK 16) [Canis familiaris].
          Length = 477

 Score =  441 bits (1135), Expect = e-124
 Identities = 223/315 (70%), Positives = 269/315 (85%)
 Frame = +1

Query: 304  NEKLTMQNLNDRLASYLEKVRALEQANGDLEVKIRDWYQKQGPGPARDYSHYFKTIEDLR 483
            NEKLTMQNLNDRLASYL+KVRALE+AN +LEVKIRDWYQ+Q P  A+DYS YFKTIEDLR
Sbjct: 117  NEKLTMQNLNDRLASYLDKVRALEEANTELEVKIRDWYQRQRPSEAKDYSPYFKTIEDLR 176

Query: 484  DKILGATIENSKIVLQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVLDELTLART 663
            +KI+ ATIEN++ +LQIDNARLAADDFRTK+E E  LR SVEADINGLRRVLDELTL+RT
Sbjct: 177  NKIITATIENAQPILQIDNARLAADDFRTKYEHELTLRQSVEADINGLRRVLDELTLSRT 236

Query: 664  DLELQIEGLKEELAYLKKNHEEEISALKGQVGGQVSVEVDSAPGIDLAKILSDMRSQYEV 843
            DLE+QIEGLKEELAYL+KNHEEE+ AL+GQ GG VSVE+D+APG+DL++IL++MR QYE 
Sbjct: 237  DLEMQIEGLKEELAYLRKNHEEEMLALRGQTGGDVSVEMDAAPGVDLSRILNEMRDQYEQ 296

Query: 844  MAEQNRKDAEAWFTSRTEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIELQSQLSMKX 1023
            MAE+NR+DAEAWF S+TEELN+EV  ++E LQ  ++EVT+LRRTLQGLEIELQSQLSMK 
Sbjct: 297  MAEKNRRDAEAWFLSKTEELNKEVVSNSELLQSGRSEVTELRRTLQGLEIELQSQLSMKA 356

Query: 1024 XXXXXXXXXXXRFGAQLAQIQALISGIEAQLSDVRADTERQNQEYQHLMDIKTRLEQEIA 1203
                       R+  QL+QIQ LI  +E QL+ +R + E+Q+QEYQ L+D+KTRLEQEIA
Sbjct: 357  SLESSLEETKGRYCMQLSQIQGLIGNVEEQLAQLRCEMEQQSQEYQVLLDVKTRLEQEIA 416

Query: 1204 TYRNLLEGQDANYNN 1248
            TYR LLEG+DA+ ++
Sbjct: 417  TYRRLLEGEDAHLSS 431


>ref|XP_850765.1| PREDICTED: similar to keratin 13 isoform a isoform 2 [Canis
            familiaris].
          Length = 404

 Score =  426 bits (1096), Expect = e-119
 Identities = 217/318 (68%), Positives = 261/318 (82%), Gaps = 1/318 (0%)
 Frame = +1

Query: 304  NEKLTMQNLNDRLASYLEKVRALEQANGDLEVKIRDWYQKQGPG-PARDYSHYFKTIEDL 480
            NEK+TMQNLNDRLASYL+KVRALE+AN +LEVKIRDW+ KQ P  P RDYS Y+KTIE+L
Sbjct: 63   NEKITMQNLNDRLASYLDKVRALEEANTELEVKIRDWHLKQSPSSPERDYSPYYKTIEEL 122

Query: 481  RDKILGATIENSKIVLQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVLDELTLAR 660
            RDKIL ATI+N++++L+IDNARLAADDFR K+E E  LR SVEADINGLRRVLDELTL++
Sbjct: 123  RDKILAATIDNNRVILEIDNARLAADDFRLKYENELTLRQSVEADINGLRRVLDELTLSK 182

Query: 661  TDLELQIEGLKEELAYLKKNHEEEISALKGQVGGQVSVEVDSAPGIDLAKILSDMRSQYE 840
            TDLE+QIE L EELAYLKKNHEEE+     Q+ GQV+VE+D+ PGIDL ++L++MR QYE
Sbjct: 183  TDLEMQIESLNEELAYLKKNHEEEMKEFSNQMVGQVNVEMDATPGIDLTRVLAEMREQYE 242

Query: 841  VMAEQNRKDAEAWFTSRTEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIELQSQLSMK 1020
             MAE+NR+DAE WF S+  +LN+EV+ +T  +Q SKTE+T+LRRTLQGLEIELQSQLSMK
Sbjct: 243  AMAEKNRRDAEEWFHSKVPQLNKEVSTNTAMIQTSKTEITELRRTLQGLEIELQSQLSMK 302

Query: 1021 XXXXXXXXXXXXRFGAQLAQIQALISGIEAQLSDVRADTERQNQEYQHLMDIKTRLEQEI 1200
                        R+  QL QIQ LIS IEAQLS++R++ E QNQEY+ L+DIKTRLEQEI
Sbjct: 303  AGLESTLADTECRYALQLQQIQGLISSIEAQLSELRSEMECQNQEYKMLLDIKTRLEQEI 362

Query: 1201 ATYRNLLEGQDANYNNLT 1254
            ATYR+LLEGQDA    LT
Sbjct: 363  ATYRSLLEGQDARMAGLT 380


>ref|XP_862344.1| PREDICTED: similar to keratin 13 isoform a isoform 5 [Canis
            familiaris].
          Length = 692

 Score =  426 bits (1094), Expect = e-119
 Identities = 216/312 (69%), Positives = 260/312 (83%), Gaps = 1/312 (0%)
 Frame = +1

Query: 304  NEKLTMQNLNDRLASYLEKVRALEQANGDLEVKIRDWYQKQGPG-PARDYSHYFKTIEDL 480
            NEK+TMQNLNDRLASYL+KVRALE+AN +LEVKIRDW+ KQ P  P RDYS Y+KTIE+L
Sbjct: 380  NEKITMQNLNDRLASYLDKVRALEEANTELEVKIRDWHLKQSPSSPERDYSPYYKTIEEL 439

Query: 481  RDKILGATIENSKIVLQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVLDELTLAR 660
            RDKIL ATI+N++++L+IDNARLAADDFR K+E E  LR SVEADINGLRRVLDELTL++
Sbjct: 440  RDKILAATIDNNRVILEIDNARLAADDFRLKYENELTLRQSVEADINGLRRVLDELTLSK 499

Query: 661  TDLELQIEGLKEELAYLKKNHEEEISALKGQVGGQVSVEVDSAPGIDLAKILSDMRSQYE 840
            TDLE+QIE L EELAYLKKNHEEE+     Q+ GQV+VE+D+ PGIDL ++L++MR QYE
Sbjct: 500  TDLEMQIESLNEELAYLKKNHEEEMKEFSNQMVGQVNVEMDATPGIDLTRVLAEMREQYE 559

Query: 841  VMAEQNRKDAEAWFTSRTEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIELQSQLSMK 1020
             MAE+NR+DAE WF S++ ELN+EV+ +T  +Q SKTE+T+LRRTLQGLEIELQSQLSMK
Sbjct: 560  AMAEKNRRDAEEWFHSKSAELNKEVSTNTAMIQTSKTEITELRRTLQGLEIELQSQLSMK 619

Query: 1021 XXXXXXXXXXXXRFGAQLAQIQALISGIEAQLSDVRADTERQNQEYQHLMDIKTRLEQEI 1200
                        R+  QL QIQ LIS IEAQLS++R++ E QNQEY+ L+DIKTRLEQEI
Sbjct: 620  AGLESTLADTECRYALQLQQIQGLISSIEAQLSELRSEMECQNQEYKMLLDIKTRLEQEI 679

Query: 1201 ATYRNLLEGQDA 1236
            ATYR+LLEGQDA
Sbjct: 680  ATYRSLLEGQDA 691



 Score =  406 bits (1044), Expect(2) = e-114
 Identities = 205/292 (70%), Positives = 241/292 (82%), Gaps = 1/292 (0%)
 Frame = +1

Query: 364  RALEQANGDLEVKIRDWYQKQGPG-PARDYSHYFKTIEDLRDKILGATIENSKIVLQIDN 540
            R    ANGDLEVKIRDWYQKQ P  P RDYS YFKTIE+LRDKIL ATI+NS+++L+IDN
Sbjct: 7    RTSTTANGDLEVKIRDWYQKQSPSSPERDYSPYFKTIEELRDKILAATIDNSRVILEIDN 66

Query: 541  ARLAADDFRTKFETEQALRLSVEADINGLRRVLDELTLARTDLELQIEGLKEELAYLKKN 720
            ARLAADDFR K+E E  LR  VEADINGLRRVLDELTLA+ DLE+QIEGL EELAYLKKN
Sbjct: 67   ARLAADDFRLKYENELTLRQGVEADINGLRRVLDELTLAKADLEMQIEGLNEELAYLKKN 126

Query: 721  HEEEISALKGQVGGQVSVEVDSAPGIDLAKILSDMRSQYEVMAEQNRKDAEAWFTSRTEE 900
            HEEE+     Q+ GQV+VE+D+APG+DL ++L++MR QYE MAE+NR+DAEAWF S+TEE
Sbjct: 127  HEEEMKEFSSQLAGQVNVEMDAAPGVDLTRVLAEMREQYEAMAEKNRRDAEAWFFSKTEE 186

Query: 901  LNREVAGHTEQLQISKTEVTDLRRTLQGLEIELQSQLSMKXXXXXXXXXXXXRFGAQLAQ 1080
            LN+EVA +TE +Q SKTE+TDLRRT+QGLEIELQSQLSMK            R+  QL Q
Sbjct: 187  LNKEVASNTEMIQTSKTEITDLRRTMQGLEIELQSQLSMKAGLESSLAETECRYATQLQQ 246

Query: 1081 IQALISGIEAQLSDVRADTERQNQEYQHLMDIKTRLEQEIATYRNLLEGQDA 1236
            IQ LIS +EAQLS++R++ E QNQEY+ L+DIKTRLEQEIATYR+LLEGQDA
Sbjct: 247  IQGLISSLEAQLSELRSEMECQNQEYKTLLDIKTRLEQEIATYRSLLEGQDA 298



 Score = 24.6 bits (52), Expect(2) = e-114
 Identities = 10/11 (90%), Positives = 10/11 (90%)
 Frame = +2

Query: 308 RSSPCRTSTTA 340
           R SPCRTSTTA
Sbjct: 2   RRSPCRTSTTA 12


>ref|XP_548106.2| PREDICTED: similar to keratin 13 isoform a isoform 1 [Canis
            familiaris].
          Length = 407

 Score =  426 bits (1094), Expect = e-119
 Identities = 216/312 (69%), Positives = 260/312 (83%), Gaps = 1/312 (0%)
 Frame = +1

Query: 304  NEKLTMQNLNDRLASYLEKVRALEQANGDLEVKIRDWYQKQGPG-PARDYSHYFKTIEDL 480
            NEK+TMQNLNDRLASYL+KVRALE+AN +LEVKIRDW+ KQ P  P RDYS Y+KTIE+L
Sbjct: 95   NEKITMQNLNDRLASYLDKVRALEEANTELEVKIRDWHLKQSPSSPERDYSPYYKTIEEL 154

Query: 481  RDKILGATIENSKIVLQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVLDELTLAR 660
            RDKIL ATI+N++++L+IDNARLAADDFR K+E E  LR SVEADINGLRRVLDELTL++
Sbjct: 155  RDKILAATIDNNRVILEIDNARLAADDFRLKYENELTLRQSVEADINGLRRVLDELTLSK 214

Query: 661  TDLELQIEGLKEELAYLKKNHEEEISALKGQVGGQVSVEVDSAPGIDLAKILSDMRSQYE 840
            TDLE+QIE L EELAYLKKNHEEE+     Q+ GQV+VE+D+ PGIDL ++L++MR QYE
Sbjct: 215  TDLEMQIESLNEELAYLKKNHEEEMKEFSNQMVGQVNVEMDATPGIDLTRVLAEMREQYE 274

Query: 841  VMAEQNRKDAEAWFTSRTEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIELQSQLSMK 1020
             MAE+NR+DAE WF S++ ELN+EV+ +T  +Q SKTE+T+LRRTLQGLEIELQSQLSMK
Sbjct: 275  AMAEKNRRDAEEWFHSKSAELNKEVSTNTAMIQTSKTEITELRRTLQGLEIELQSQLSMK 334

Query: 1021 XXXXXXXXXXXXRFGAQLAQIQALISGIEAQLSDVRADTERQNQEYQHLMDIKTRLEQEI 1200
                        R+  QL QIQ LIS IEAQLS++R++ E QNQEY+ L+DIKTRLEQEI
Sbjct: 335  AGLESTLADTECRYALQLQQIQGLISSIEAQLSELRSEMECQNQEYKMLLDIKTRLEQEI 394

Query: 1201 ATYRNLLEGQDA 1236
            ATYR+LLEGQDA
Sbjct: 395  ATYRSLLEGQDA 406


>ref|XP_861773.1| PREDICTED: similar to type I keratin KA17 isoform 2 [Canis
            familiaris].
          Length = 413

 Score =  402 bits (1033), Expect = e-112
 Identities = 204/311 (65%), Positives = 252/311 (81%)
 Frame = +1

Query: 307  EKLTMQNLNDRLASYLEKVRALEQANGDLEVKIRDWYQKQGPGPARDYSHYFKTIEDLRD 486
            EK TMQNLNDRLASYL+KVRALE+AN +LEVKIRDWYQKQ PGPARDYSHY++TIEDL++
Sbjct: 84   EKATMQNLNDRLASYLDKVRALEEANTELEVKIRDWYQKQAPGPARDYSHYYQTIEDLKN 143

Query: 487  KILGATIENSKIVLQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVLDELTLARTD 666
            KIL AT++N+ I+LQIDNARLAADDFRTK                    VLDELTL+R D
Sbjct: 144  KILTATVDNANILLQIDNARLAADDFRTK--------------------VLDELTLSRAD 183

Query: 667  LELQIEGLKEELAYLKKNHEEEISALKGQVGGQVSVEVDSAPGIDLAKILSDMRSQYEVM 846
            LE+QIE LKEELAYL+KNHEEE++AL+GQVGG+++VE+D+APG+DL++ILS+MR QYE M
Sbjct: 184  LEMQIENLKEELAYLRKNHEEEMNALRGQVGGEINVEMDAAPGVDLSRILSEMRDQYEKM 243

Query: 847  AEQNRKDAEAWFTSRTEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIELQSQLSMKXX 1026
            AE+NRKDAE WF S+TEELNREVA ++E +Q  K+E+++LRRT+Q LEIELQSQLSMK  
Sbjct: 244  AEKNRKDAEDWFFSKTEELNREVATNSELVQSGKSEISELRRTVQALEIELQSQLSMKAS 303

Query: 1027 XXXXXXXXXXRFGAQLAQIQALISGIEAQLSDVRADTERQNQEYQHLMDIKTRLEQEIAT 1206
                      R+  QL+QIQ LI  +E QL+ +R + E+QNQEY+ L+D+KTRLEQEIAT
Sbjct: 304  LEGSLAETENRYCVQLSQIQGLIGSVEEQLAQLRCEMEQQNQEYKILLDVKTRLEQEIAT 363

Query: 1207 YRNLLEGQDAN 1239
            YR LLEG+DA+
Sbjct: 364  YRRLLEGEDAH 374


>ref|XP_862293.1| PREDICTED: similar to keratin 13 isoform a isoform 4 [Canis
            familiaris].
          Length = 328

 Score =  384 bits (987), Expect(2) = e-107
 Identities = 197/298 (66%), Positives = 238/298 (79%), Gaps = 1/298 (0%)
 Frame = +1

Query: 364  RALEQANGDLEVKIRDWYQKQGPG-PARDYSHYFKTIEDLRDKILGATIENSKIVLQIDN 540
            R    AN +LEVKIRDW+ KQ P  P RDYS Y+KTIE+LRDKIL ATI+N++++L+IDN
Sbjct: 7    RTSTTANTELEVKIRDWHLKQSPSSPERDYSPYYKTIEELRDKILAATIDNNRVILEIDN 66

Query: 541  ARLAADDFRTKFETEQALRLSVEADINGLRRVLDELTLARTDLELQIEGLKEELAYLKKN 720
            ARLAADDFR K+E E  LR SVEADINGLRRVLDELTL++TDLE+QIE L EELAYLKKN
Sbjct: 67   ARLAADDFRLKYENELTLRQSVEADINGLRRVLDELTLSKTDLEMQIESLNEELAYLKKN 126

Query: 721  HEEEISALKGQVGGQVSVEVDSAPGIDLAKILSDMRSQYEVMAEQNRKDAEAWFTSRTEE 900
            HEEE+     Q+ GQV+VE+D+ PGIDL ++L++MR QYE MAE+NR+DAE WF S++ E
Sbjct: 127  HEEEMKEFSNQMVGQVNVEMDATPGIDLTRVLAEMREQYEAMAEKNRRDAEEWFHSKSAE 186

Query: 901  LNREVAGHTEQLQISKTEVTDLRRTLQGLEIELQSQLSMKXXXXXXXXXXXXRFGAQLAQ 1080
            LN+EV+ +T  +Q SKTE+T+LRRTLQGLEIELQSQLSMK            R+  QL Q
Sbjct: 187  LNKEVSTNTAMIQTSKTEITELRRTLQGLEIELQSQLSMKAGLESTLADTECRYALQLQQ 246

Query: 1081 IQALISGIEAQLSDVRADTERQNQEYQHLMDIKTRLEQEIATYRNLLEGQDANYNNLT 1254
            IQ LIS IEAQLS++R++ E QNQEY+ L+DIKTRLEQEIATYR+LLEGQDA    LT
Sbjct: 247  IQGLISSIEAQLSELRSEMECQNQEYKMLLDIKTRLEQEIATYRSLLEGQDARMAGLT 304



 Score = 24.6 bits (52), Expect(2) = e-107
 Identities = 10/11 (90%), Positives = 10/11 (90%)
 Frame = +2

Query: 308 RSSPCRTSTTA 340
           R SPCRTSTTA
Sbjct: 2   RRSPCRTSTTA 12


  Database: RefSeq49_CP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,874,504
  Number of sequences in database:  33,336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 50,846,771
Number of extensions: 1552318
Number of successful extensions: 11141
Number of sequences better than 1.0e-05: 125
Number of HSP's gapped: 10597
Number of HSP's successfully gapped: 137
Length of query: 471
Length of database: 18,874,504
Length adjustment: 106
Effective length of query: 365
Effective length of database: 15,340,888
Effective search space: 5599424120
Effective search space used: 5599424120
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-001863
         (1415 letters)

Database: RefSeq49_HP.fasta 
           32,964 sequences; 18,297,164 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_002267.2| keratin, type I cytoskeletal 19 [Homo sapiens].      564   e-161
Alignment   gi|NP_000413.1| keratin, type I cytoskeletal 17 [Homo sapiens].      447   e-125
Alignment   gi|NP_002266.2| keratin, type I cytoskeletal 15 [Homo sapiens].      442   e-124
Alignment   gi|NP_005548.2| keratin, type I cytoskeletal 16 [Homo sapiens].      438   e-123
Alignment   gi|NP_000517.2| keratin, type I cytoskeletal 14 [Homo sapiens].      437   e-122
Alignment   gi|NP_002265.2| keratin, type I cytoskeletal 13 isoform b [Homo...   430   e-120
Alignment   gi|NP_705694.2| keratin, type I cytoskeletal 13 isoform a [Homo...   430   e-120
Alignment   gi|NP_000214.1| keratin, type I cytoskeletal 12 [Homo sapiens].      382   e-106
Alignment   gi|NP_000412.3| keratin, type I cytoskeletal 10 [Homo sapiens].      379   e-105
Alignment   gi|NP_003762.1| keratin, type I cuticular Ha6 [Homo sapiens].        377   e-104

>ref|NP_002267.2| keratin, type I cytoskeletal 19 [Homo sapiens].
          Length = 400

 Score =  564 bits (1453), Expect = e-161
 Identities = 301/390 (77%), Positives = 319/390 (81%)
 Frame = +1

Query: 100  FGGLGGGSVRFSAGGAFRAPSIHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 279
            FGGLGGGSVRF  G AFRAPSIH                                     
Sbjct: 15   FGGLGGGSVRFGPGVAFRAPSIHGGSGGRGVSVSSARFVSSSSSGAYGGGYGGVLTASDG 74

Query: 280  XXXXXXXXNEKLTMQNLNDRLASYLEKVRALEQANGDLEVKIRDWYQKQGPGPARDYSHY 459
                    NEKLTMQNLNDRLASYL+KVRALE ANG+LEVKIRDWYQKQGPGP+RDYSHY
Sbjct: 75   LLAG----NEKLTMQNLNDRLASYLDKVRALEAANGELEVKIRDWYQKQGPGPSRDYSHY 130

Query: 460  FKTIEDLRDKILGATIENSKIVLQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVL 639
            + TI+DLRDKILGATIENS+IVLQIDNARLAADDFRTKFETEQALR+SVEADINGLRRVL
Sbjct: 131  YTTIQDLRDKILGATIENSRIVLQIDNARLAADDFRTKFETEQALRMSVEADINGLRRVL 190

Query: 640  DELTLARTDLELQIEGLKEELAYLKKNHEEEISALKGQVGGQVSVEVDSAPGIDLAKILS 819
            DELTLARTDLE+QIEGLKEELAYLKKNHEEEIS L+GQVGGQVSVEVDSAPG DLAKILS
Sbjct: 191  DELTLARTDLEMQIEGLKEELAYLKKNHEEEISTLRGQVGGQVSVEVDSAPGTDLAKILS 250

Query: 820  DMRSQYEVMAEQNRKDAEAWFTSRTEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIEL 999
            DMRSQYEVMAEQNRKDAEAWFTSRTEELNREVAGHTEQLQ+S++EVTDLRRTLQGLEIEL
Sbjct: 251  DMRSQYEVMAEQNRKDAEAWFTSRTEELNREVAGHTEQLQMSRSEVTDLRRTLQGLEIEL 310

Query: 1000 QSQLSMKXXXXXXXXXXXXRFGAQLAQIQALISGIEAQLSDVRADTERQNQEYQHLMDIK 1179
            QSQLSMK            RFGAQLA IQALISGIEAQL DVRAD+ERQNQEYQ LMDIK
Sbjct: 311  QSQLSMKAALEDTLAETEARFGAQLAHIQALISGIEAQLGDVRADSERQNQEYQRLMDIK 370

Query: 1180 TRLEQEIATYRNLLEGQDANYNNLTIIKAL 1269
            +RLEQEIATYR+LLEGQ+ +YNNL+  K L
Sbjct: 371  SRLEQEIATYRSLLEGQEDHYNNLSASKVL 400


>ref|NP_000413.1| keratin, type I cytoskeletal 17 [Homo sapiens].
          Length = 432

 Score =  447 bits (1149), Expect = e-125
 Identities = 222/311 (71%), Positives = 271/311 (87%)
 Frame = +1

Query: 307  EKLTMQNLNDRLASYLEKVRALEQANGDLEVKIRDWYQKQGPGPARDYSHYFKTIEDLRD 486
            EK TMQNLNDRLASYL+KVRALE+AN +LEVKIRDWYQ+Q PGPARDYS Y++TIE+L++
Sbjct: 84   EKATMQNLNDRLASYLDKVRALEEANTELEVKIRDWYQRQAPGPARDYSQYYRTIEELQN 143

Query: 487  KILGATIENSKIVLQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVLDELTLARTD 666
            KIL AT++N+ I+LQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVLDELTLAR D
Sbjct: 144  KILTATVDNANILLQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVLDELTLARAD 203

Query: 667  LELQIEGLKEELAYLKKNHEEEISALKGQVGGQVSVEVDSAPGIDLAKILSDMRSQYEVM 846
            LE+QIE LKEELAYLKKNHEEE++AL+GQVGG+++VE+D+APG+DL++IL++MR QYE M
Sbjct: 204  LEMQIENLKEELAYLKKNHEEEMNALRGQVGGEINVEMDAAPGVDLSRILNEMRDQYEKM 263

Query: 847  AEQNRKDAEAWFTSRTEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIELQSQLSMKXX 1026
            AE+NRKDAE WF S+TEELNREVA ++E +Q  K+E+++LRRT+Q LEIELQSQLSMK  
Sbjct: 264  AEKNRKDAEDWFFSKTEELNREVATNSELVQSGKSEISELRRTMQALEIELQSQLSMKAS 323

Query: 1027 XXXXXXXXXXRFGAQLAQIQALISGIEAQLSDVRADTERQNQEYQHLMDIKTRLEQEIAT 1206
                      R+  QL+QIQ LI  +E QL+ +R + E+QNQEY+ L+D+KTRLEQEIAT
Sbjct: 324  LEGNLAETENRYCVQLSQIQGLIGSVEEQLAQLRCEMEQQNQEYKILLDVKTRLEQEIAT 383

Query: 1207 YRNLLEGQDAN 1239
            YR LLEG+DA+
Sbjct: 384  YRRLLEGEDAH 394


>ref|NP_002266.2| keratin, type I cytoskeletal 15 [Homo sapiens].
          Length = 456

 Score =  442 bits (1138), Expect = e-124
 Identities = 224/322 (69%), Positives = 264/322 (81%), Gaps = 1/322 (0%)
 Frame = +1

Query: 304  NEKLTMQNLNDRLASYLEKVRALEQANGDLEVKIRDWYQKQGP-GPARDYSHYFKTIEDL 480
            NEK+TMQNLNDRLASYL+KVRALE+AN DLEVKI DWYQKQ P  P  DYS YFKTIE+L
Sbjct: 104  NEKITMQNLNDRLASYLDKVRALEEANADLEVKIHDWYQKQTPTSPECDYSQYFKTIEEL 163

Query: 481  RDKILGATIENSKIVLQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVLDELTLAR 660
            RDKI+  TI+NS+++L+IDNARLAADDFR K+E E ALR  VEADINGLRRVLDELTLAR
Sbjct: 164  RDKIMATTIDNSRVILEIDNARLAADDFRLKYENELALRQGVEADINGLRRVLDELTLAR 223

Query: 661  TDLELQIEGLKEELAYLKKNHEEEISALKGQVGGQVSVEVDSAPGIDLAKILSDMRSQYE 840
            TDLE+QIEGL EELAYLKKNHEEE+     Q+ GQV+VE+D+APG+DL ++L++MR QYE
Sbjct: 224  TDLEMQIEGLNEELAYLKKNHEEEMKEFSSQLAGQVNVEMDAAPGVDLTRVLAEMREQYE 283

Query: 841  VMAEQNRKDAEAWFTSRTEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIELQSQLSMK 1020
             MAE+NR+D EAWF S+TEELN+EVA +TE +Q SKTE+TDLRRT+Q LEIELQSQLSMK
Sbjct: 284  AMAEKNRRDVEAWFFSKTEELNKEVASNTEMIQTSKTEITDLRRTMQELEIELQSQLSMK 343

Query: 1021 XXXXXXXXXXXXRFGAQLAQIQALISGIEAQLSDVRADTERQNQEYQHLMDIKTRLEQEI 1200
                        R+  QL QIQ LI G+EAQLS++R + E QNQEY+ L+DIKTRLEQEI
Sbjct: 344  AGLENSLAETECRYATQLQQIQGLIGGLEAQLSELRCEMEAQNQEYKMLLDIKTRLEQEI 403

Query: 1201 ATYRNLLEGQDANYNNLTIIKA 1266
            ATYR+LLEGQDA    + I +A
Sbjct: 404  ATYRSLLEGQDAKMAGIGIREA 425


>ref|NP_005548.2| keratin, type I cytoskeletal 16 [Homo sapiens].
          Length = 473

 Score =  438 bits (1126), Expect = e-123
 Identities = 219/315 (69%), Positives = 269/315 (85%)
 Frame = +1

Query: 304  NEKLTMQNLNDRLASYLEKVRALEQANGDLEVKIRDWYQKQGPGPARDYSHYFKTIEDLR 483
            +EK+TMQNLNDRLASYL+KVRALE+AN DLEVKIRDWYQ+Q P   +DYS YFKTIEDLR
Sbjct: 116  SEKVTMQNLNDRLASYLDKVRALEEANADLEVKIRDWYQRQRPSEIKDYSPYFKTIEDLR 175

Query: 484  DKILGATIENSKIVLQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVLDELTLART 663
            +KI+ ATIEN++ +LQIDNARLAADDFRTK+E E ALR +VEAD+NGLRRVLDELTLART
Sbjct: 176  NKIIAATIENAQPILQIDNARLAADDFRTKYEHELALRQTVEADVNGLRRVLDELTLART 235

Query: 664  DLELQIEGLKEELAYLKKNHEEEISALKGQVGGQVSVEVDSAPGIDLAKILSDMRSQYEV 843
            DLE+QIEGLKEELAYL+KNHEEE+ AL+GQ GG V+VE+D+APG+DL++IL++MR QYE 
Sbjct: 236  DLEMQIEGLKEELAYLRKNHEEEMLALRGQTGGDVNVEMDAAPGVDLSRILNEMRDQYEQ 295

Query: 844  MAEQNRKDAEAWFTSRTEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIELQSQLSMKX 1023
            MAE+NR+DAE WF S+TEELN+EVA ++E +Q S++EVT+LRR LQGLEIELQSQLSMK 
Sbjct: 296  MAEKNRRDAETWFLSKTEELNKEVASNSELVQSSRSEVTELRRVLQGLEIELQSQLSMKA 355

Query: 1024 XXXXXXXXXXXRFGAQLAQIQALISGIEAQLSDVRADTERQNQEYQHLMDIKTRLEQEIA 1203
                       R+  QL+QIQ LI  +E QL+ +R + E+Q+QEYQ L+D+KTRLEQEIA
Sbjct: 356  SLENSLEETKGRYCMQLSQIQGLIGSVEEQLAQLRCEMEQQSQEYQILLDVKTRLEQEIA 415

Query: 1204 TYRNLLEGQDANYNN 1248
            TYR LLEG+DA+ ++
Sbjct: 416  TYRRLLEGEDAHLSS 430


>ref|NP_000517.2| keratin, type I cytoskeletal 14 [Homo sapiens].
          Length = 472

 Score =  437 bits (1124), Expect = e-122
 Identities = 218/315 (69%), Positives = 269/315 (85%)
 Frame = +1

Query: 304  NEKLTMQNLNDRLASYLEKVRALEQANGDLEVKIRDWYQKQGPGPARDYSHYFKTIEDLR 483
            +EK+TMQNLNDRLASYL+KVRALE+AN DLEVKIRDWYQ+Q P   +DYS YFKTIEDLR
Sbjct: 114  SEKVTMQNLNDRLASYLDKVRALEEANADLEVKIRDWYQRQRPAEIKDYSPYFKTIEDLR 173

Query: 484  DKILGATIENSKIVLQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVLDELTLART 663
            +KIL AT++N+ ++LQIDNARLAADDFRTK+ETE  LR+SVEADINGLRRVLDELTLAR 
Sbjct: 174  NKILTATVDNANVLLQIDNARLAADDFRTKYETELNLRMSVEADINGLRRVLDELTLARA 233

Query: 664  DLELQIEGLKEELAYLKKNHEEEISALKGQVGGQVSVEVDSAPGIDLAKILSDMRSQYEV 843
            DLE+QIE LKEELAYLKKNHEEE++AL+GQVGG V+VE+D+APG+DL++IL++MR QYE 
Sbjct: 234  DLEMQIESLKEELAYLKKNHEEEMNALRGQVGGDVNVEMDAAPGVDLSRILNEMRDQYEK 293

Query: 844  MAEQNRKDAEAWFTSRTEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIELQSQLSMKX 1023
            MAE+NRKDAE WF ++TEELNREVA ++E +Q  K+E+++LRRT+Q LEIELQSQLSMK 
Sbjct: 294  MAEKNRKDAEEWFFTKTEELNREVATNSELVQSGKSEISELRRTMQNLEIELQSQLSMKA 353

Query: 1024 XXXXXXXXXXXRFGAQLAQIQALISGIEAQLSDVRADTERQNQEYQHLMDIKTRLEQEIA 1203
                       R+  QLAQIQ +I  +E QL+ +R + E+QNQEY+ L+D+KTRLEQEIA
Sbjct: 354  SLENSLEETKGRYCMQLAQIQEMIGSVEEQLAQLRCEMEQQNQEYKILLDVKTRLEQEIA 413

Query: 1204 TYRNLLEGQDANYNN 1248
            TYR LLEG+DA+ ++
Sbjct: 414  TYRRLLEGEDAHLSS 428


>ref|NP_002265.2| keratin, type I cytoskeletal 13 isoform b [Homo sapiens].
          Length = 420

 Score =  430 bits (1106), Expect = e-120
 Identities = 219/312 (70%), Positives = 261/312 (83%), Gaps = 1/312 (0%)
 Frame = +1

Query: 304  NEKLTMQNLNDRLASYLEKVRALEQANGDLEVKIRDWYQKQGPG-PARDYSHYFKTIEDL 480
            NEK+TMQNLNDRLASYLEKVRALE+AN DLEVKIRDW+ KQ P  P RDYS Y+KTIE+L
Sbjct: 103  NEKITMQNLNDRLASYLEKVRALEEANADLEVKIRDWHLKQSPASPERDYSPYYKTIEEL 162

Query: 481  RDKILGATIENSKIVLQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVLDELTLAR 660
            RDKIL ATIEN++++L+IDNARLAADDFR K+E E ALR SVEADINGLRRVLDELTL++
Sbjct: 163  RDKILTATIENNRVILEIDNARLAADDFRLKYENELALRQSVEADINGLRRVLDELTLSK 222

Query: 661  TDLELQIEGLKEELAYLKKNHEEEISALKGQVGGQVSVEVDSAPGIDLAKILSDMRSQYE 840
            TDLE+QIE L EELAY+KKNHEEE+     QV GQV+VE+D+ PGIDL ++L++MR QYE
Sbjct: 223  TDLEMQIESLNEELAYMKKNHEEEMKEFSNQVVGQVNVEMDATPGIDLTRVLAEMREQYE 282

Query: 841  VMAEQNRKDAEAWFTSRTEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIELQSQLSMK 1020
             MAE+NR+DAE WF +++ ELN+EV+ +T  +Q SKTE+T+LRRTLQGLEIELQSQLSMK
Sbjct: 283  AMAERNRRDAEEWFHAKSAELNKEVSTNTAMIQTSKTEITELRRTLQGLEIELQSQLSMK 342

Query: 1021 XXXXXXXXXXXXRFGAQLAQIQALISGIEAQLSDVRADTERQNQEYQHLMDIKTRLEQEI 1200
                        R+  QL QIQ LIS IEAQLS++R++ E QNQEY+ L+DIKTRLEQEI
Sbjct: 343  AGLENTVAETECRYALQLQQIQGLISSIEAQLSELRSEMECQNQEYKMLLDIKTRLEQEI 402

Query: 1201 ATYRNLLEGQDA 1236
            ATYR+LLEGQDA
Sbjct: 403  ATYRSLLEGQDA 414


>ref|NP_705694.2| keratin, type I cytoskeletal 13 isoform a [Homo sapiens].
          Length = 458

 Score =  430 bits (1106), Expect = e-120
 Identities = 219/312 (70%), Positives = 261/312 (83%), Gaps = 1/312 (0%)
 Frame = +1

Query: 304  NEKLTMQNLNDRLASYLEKVRALEQANGDLEVKIRDWYQKQGPG-PARDYSHYFKTIEDL 480
            NEK+TMQNLNDRLASYLEKVRALE+AN DLEVKIRDW+ KQ P  P RDYS Y+KTIE+L
Sbjct: 103  NEKITMQNLNDRLASYLEKVRALEEANADLEVKIRDWHLKQSPASPERDYSPYYKTIEEL 162

Query: 481  RDKILGATIENSKIVLQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVLDELTLAR 660
            RDKIL ATIEN++++L+IDNARLAADDFR K+E E ALR SVEADINGLRRVLDELTL++
Sbjct: 163  RDKILTATIENNRVILEIDNARLAADDFRLKYENELALRQSVEADINGLRRVLDELTLSK 222

Query: 661  TDLELQIEGLKEELAYLKKNHEEEISALKGQVGGQVSVEVDSAPGIDLAKILSDMRSQYE 840
            TDLE+QIE L EELAY+KKNHEEE+     QV GQV+VE+D+ PGIDL ++L++MR QYE
Sbjct: 223  TDLEMQIESLNEELAYMKKNHEEEMKEFSNQVVGQVNVEMDATPGIDLTRVLAEMREQYE 282

Query: 841  VMAEQNRKDAEAWFTSRTEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIELQSQLSMK 1020
             MAE+NR+DAE WF +++ ELN+EV+ +T  +Q SKTE+T+LRRTLQGLEIELQSQLSMK
Sbjct: 283  AMAERNRRDAEEWFHAKSAELNKEVSTNTAMIQTSKTEITELRRTLQGLEIELQSQLSMK 342

Query: 1021 XXXXXXXXXXXXRFGAQLAQIQALISGIEAQLSDVRADTERQNQEYQHLMDIKTRLEQEI 1200
                        R+  QL QIQ LIS IEAQLS++R++ E QNQEY+ L+DIKTRLEQEI
Sbjct: 343  AGLENTVAETECRYALQLQQIQGLISSIEAQLSELRSEMECQNQEYKMLLDIKTRLEQEI 402

Query: 1201 ATYRNLLEGQDA 1236
            ATYR+LLEGQDA
Sbjct: 403  ATYRSLLEGQDA 414


>ref|NP_000214.1| keratin, type I cytoskeletal 12 [Homo sapiens].
          Length = 494

 Score =  382 bits (980), Expect = e-106
 Identities = 196/313 (62%), Positives = 247/313 (78%), Gaps = 4/313 (1%)
 Frame = +1

Query: 304  NEKLTMQNLNDRLASYLEKVRALEQANGDLEVKIRDWYQKQGPGPA----RDYSHYFKTI 471
            +EK TMQNLNDRLASYL+KVRALE+AN +LE KIR+WY+ +G G A     DYS Y+  I
Sbjct: 124  SEKETMQNLNDRLASYLDKVRALEEANTELENKIREWYETRGTGTADASQSDYSKYYPLI 183

Query: 472  EDLRDKILGATIENSKIVLQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVLDELT 651
            EDLR+KI+ A+I N++++LQIDNARLAA+DFR K+E E ALR  VEADINGLRRVLDELT
Sbjct: 184  EDLRNKIISASIGNAQLLLQIDNARLAAEDFRMKYENELALRQGVEADINGLRRVLDELT 243

Query: 652  LARTDLELQIEGLKEELAYLKKNHEEEISALKGQVGGQVSVEVDSAPGIDLAKILSDMRS 831
            L RTDLE+QIE L EELAY+KKNHE+E+ + +    G+VSVE+D+APG+DL ++L+DMR+
Sbjct: 244  LTRTDLEMQIESLNEELAYMKKNHEDELQSFRVGGPGEVSVEMDAAPGVDLTRLLNDMRA 303

Query: 832  QYEVMAEQNRKDAEAWFTSRTEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIELQSQL 1011
            QYE +AEQNRKDAEAWF  ++ EL +E++ +TEQLQ SK+EVTDLRR  Q LEIELQSQL
Sbjct: 304  QYETIAEQNRKDAEAWFIEKSGELRKEISTNTEQLQSSKSEVTDLRRAFQNLEIELQSQL 363

Query: 1012 SMKXXXXXXXXXXXXRFGAQLAQIQALISGIEAQLSDVRADTERQNQEYQHLMDIKTRLE 1191
            +MK             + AQL+Q+Q LIS +EAQL  VRAD ERQN ++Q L+++K RLE
Sbjct: 364  AMKKSLEDSLAEAEGDYCAQLSQVQQLISNLEAQLLQVRADAERQNVDHQRLLNVKARLE 423

Query: 1192 QEIATYRNLLEGQ 1230
             EI TYR LL+G+
Sbjct: 424  LEIETYRRLLDGE 436


>ref|NP_000412.3| keratin, type I cytoskeletal 10 [Homo sapiens].
          Length = 584

 Score =  379 bits (973), Expect = e-105
 Identities = 193/315 (61%), Positives = 246/315 (78%), Gaps = 3/315 (0%)
 Frame = +1

Query: 304  NEKLTMQNLNDRLASYLEKVRALEQANGDLEVKIRDWYQKQG---PGPARDYSHYFKTIE 474
            NEK+TMQNLNDRLASYL+KVRALE++N +LE KI++WY+K G    G  RDYS Y+KTI+
Sbjct: 145  NEKVTMQNLNDRLASYLDKVRALEESNYELEGKIKEWYEKHGNSHQGEPRDYSKYYKTID 204

Query: 475  DLRDKILGATIENSKIVLQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVLDELTL 654
            DL+++IL  T +N+ I+LQIDNARLAADDFR K+E E ALR SVEADINGLRRVLDELTL
Sbjct: 205  DLKNQILNLTTDNANILLQIDNARLAADDFRLKYENEVALRQSVEADINGLRRVLDELTL 264

Query: 655  ARTDLELQIEGLKEELAYLKKNHEEEISALKGQVGGQVSVEVDSAPGIDLAKILSDMRSQ 834
             + DLE+QIE L EELAYLKKNHEEE+  L+    G V+VE+++APG+DL ++L++MRSQ
Sbjct: 265  TKADLEMQIESLTEELAYLKKNHEEEMKDLRNVSTGDVNVEMNAAPGVDLTQLLNNMRSQ 324

Query: 835  YEVMAEQNRKDAEAWFTSRTEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIELQSQLS 1014
            YE +AEQNRKDAEAWF  +++EL  E+  + EQ+   K+E+T+LRR +Q LEIELQSQL+
Sbjct: 325  YEQLAEQNRKDAEAWFNEKSKELTTEIDNNIEQISSYKSEITELRRNVQALEIELQSQLA 384

Query: 1015 MKXXXXXXXXXXXXRFGAQLAQIQALISGIEAQLSDVRADTERQNQEYQHLMDIKTRLEQ 1194
            +K            R+  QL+QIQA IS +E QL  +RA+TE QN EYQ L+DIK RLE 
Sbjct: 385  LKQSLEASLAETEGRYCVQLSQIQAQISALEEQLQQIRAETECQNTEYQQLLDIKIRLEN 444

Query: 1195 EIATYRNLLEGQDAN 1239
            EI TYR+LLEG+ ++
Sbjct: 445  EIQTYRSLLEGEGSS 459


>ref|NP_003762.1| keratin, type I cuticular Ha6 [Homo sapiens].
          Length = 467

 Score =  377 bits (967), Expect = e-104
 Identities = 191/310 (61%), Positives = 240/310 (77%)
 Frame = +1

Query: 304  NEKLTMQNLNDRLASYLEKVRALEQANGDLEVKIRDWYQKQGPGPARDYSHYFKTIEDLR 483
            +EK TMQ LNDRLA+YLEKVR LE+ N +LE +I++WY+ Q P    DY  YFKTIED +
Sbjct: 92   SEKETMQFLNDRLANYLEKVRQLERENAELESRIQEWYEFQIPYICPDYQSYFKTIEDFQ 151

Query: 484  DKILGATIENSKIVLQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVLDELTLART 663
             KIL    EN+++VLQIDNA+LAADDFRTK+ETE +LR  VEADINGLRR+LDELTL + 
Sbjct: 152  QKILLTKSENARLVLQIDNAKLAADDFRTKYETELSLRQLVEADINGLRRILDELTLCKA 211

Query: 664  DLELQIEGLKEELAYLKKNHEEEISALKGQVGGQVSVEVDSAPGIDLAKILSDMRSQYEV 843
            DLE Q+E LKEEL  LKKNHEEE+S L+ Q+G +++VEVD+AP +DL KIL DMR QYE 
Sbjct: 212  DLEAQVESLKEELMCLKKNHEEEVSVLRCQLGDRLNVEVDAAPPVDLNKILEDMRCQYEA 271

Query: 844  MAEQNRKDAEAWFTSRTEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIELQSQLSMKX 1023
            + E NR+D EAWF ++TEELN++V   +EQLQ  +TE+ +LRRT+  LEIELQ+Q SM+ 
Sbjct: 272  LVENNRRDVEAWFNTQTEELNQQVVSSSEQLQCCQTEIIELRRTVNALEIELQAQHSMRN 331

Query: 1024 XXXXXXXXXXXRFGAQLAQIQALISGIEAQLSDVRADTERQNQEYQHLMDIKTRLEQEIA 1203
                       R+ +QLAQ+Q LIS +EAQLS++R D ERQNQEYQ L+D+K RLE EIA
Sbjct: 332  SLESTLAETEARYSSQLAQMQCLISNVEAQLSEIRCDLERQNQEYQVLLDVKARLEGEIA 391

Query: 1204 TYRNLLEGQD 1233
            TYR+LLEG+D
Sbjct: 392  TYRHLLEGED 401


  Database: RefSeq49_HP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,297,164
  Number of sequences in database:  32,964
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 49,287,321
Number of extensions: 1472876
Number of successful extensions: 9892
Number of sequences better than 1.0e-05: 83
Number of HSP's gapped: 9467
Number of HSP's successfully gapped: 84
Length of query: 471
Length of database: 18,297,164
Length adjustment: 106
Effective length of query: 365
Effective length of database: 14,802,980
Effective search space: 5403087700
Effective search space used: 5403087700
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-001863
         (1415 letters)

Database: RefSeq49_MP.fasta 
           30,036 sequences; 15,617,559 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_032497.1| keratin, type I cytoskeletal 19 [Mus musculus].      536   e-152
Alignment   gi|NP_997648.2| keratin, type I cytoskeletal 42 [Mus musculus].      459   e-129
Alignment   gi|NP_034793.1| keratin, type I cytoskeletal 17 [Mus musculus].      448   e-126
Alignment   gi|NP_032495.2| keratin, type I cytoskeletal 15 [Mus musculus].      445   e-125
Alignment   gi|NP_058654.1| keratin, type I cytoskeletal 14 [Mus musculus].      436   e-122
Alignment   gi|NP_034792.1| keratin, type I cytoskeletal 13 [Mus musculus].      422   e-118
Alignment   gi|NP_032496.1| keratin, type I cytoskeletal 16 [Mus musculus].      407   e-113
Alignment   gi|NP_034790.2| keratin, type I cytoskeletal 10 [Mus musculus].      375   e-104
Alignment   gi|NP_001167570.1| keratin, type I cuticular Ha6 [Mus musculus].     372   e-103
Alignment   gi|NP_034791.2| keratin, type I cytoskeletal 12 [Mus musculus].      368   e-102

>ref|NP_032497.1| keratin, type I cytoskeletal 19 [Mus musculus].
          Length = 403

 Score =  536 bits (1382), Expect = e-152
 Identities = 284/390 (72%), Positives = 313/390 (80%)
 Frame = +1

Query: 100  FGGLGGGSVRFSAGGAFRAPSIHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 279
            FGG GGGSVR  +GG FRAPSIH                                     
Sbjct: 15   FGGTGGGSVRIGSGGVFRAPSIHGGSGGRGVSVSSTRFVTSSSGSYGGVRGGSFSGTLAV 74

Query: 280  XXXXXXXXNEKLTMQNLNDRLASYLEKVRALEQANGDLEVKIRDWYQKQGPGPARDYSHY 459
                    NEK+TMQNLNDRLASYL+KVRALEQANG+LEVKIRDWYQKQGPGP+RDY+HY
Sbjct: 75   SDGLLSG-NEKITMQNLNDRLASYLDKVRALEQANGELEVKIRDWYQKQGPGPSRDYNHY 133

Query: 460  FKTIEDLRDKILGATIENSKIVLQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVL 639
            FKTIEDLRDKILGATI+NSKIVLQIDNARLAADDFRTKFETE ALRLSVEADINGLRRVL
Sbjct: 134  FKTIEDLRDKILGATIDNSKIVLQIDNARLAADDFRTKFETEHALRLSVEADINGLRRVL 193

Query: 640  DELTLARTDLELQIEGLKEELAYLKKNHEEEISALKGQVGGQVSVEVDSAPGIDLAKILS 819
            DELTLARTDLE+QIE LKEELAYLKKNHEEEI+AL+ QVGGQVSVEVDS PG+DLAKILS
Sbjct: 194  DELTLARTDLEMQIESLKEELAYLKKNHEEEITALRSQVGGQVSVEVDSTPGVDLAKILS 253

Query: 820  DMRSQYEVMAEQNRKDAEAWFTSRTEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIEL 999
            +MRSQYE+MAE+NRKDAEA + +R EELN +VA H+EQ+QISKTEVTDLRRTLQGLEIEL
Sbjct: 254  EMRSQYEIMAEKNRKDAEATYLARIEELNTQVAVHSEQIQISKTEVTDLRRTLQGLEIEL 313

Query: 1000 QSQLSMKXXXXXXXXXXXXRFGAQLAQIQALISGIEAQLSDVRADTERQNQEYQHLMDIK 1179
            QSQLSMK            R+G QL+QIQ++ISG EAQLSDVRAD ERQNQEY+ LMDIK
Sbjct: 314  QSQLSMKAALEGTLAETEARYGVQLSQIQSVISGFEAQLSDVRADIERQNQEYKQLMDIK 373

Query: 1180 TRLEQEIATYRNLLEGQDANYNNLTIIKAL 1269
            +RLEQEIATYR+LLEGQ+A+YNNL   KA+
Sbjct: 374  SRLEQEIATYRSLLEGQEAHYNNLPTPKAI 403


>ref|NP_997648.2| keratin, type I cytoskeletal 42 [Mus musculus].
          Length = 452

 Score =  459 bits (1180), Expect = e-129
 Identities = 230/312 (73%), Positives = 273/312 (87%)
 Frame = +1

Query: 304  NEKLTMQNLNDRLASYLEKVRALEQANGDLEVKIRDWYQKQGPGPARDYSHYFKTIEDLR 483
            +EK TMQNLNDRLA+YL++VRALE+AN DLEVKIR+WY+KQGPGPARDYS YFKTIEDLR
Sbjct: 93   SEKETMQNLNDRLATYLDRVRALEEANADLEVKIREWYKKQGPGPARDYSPYFKTIEDLR 152

Query: 484  DKILGATIENSKIVLQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVLDELTLART 663
            +KIL ATI+N+ IVLQIDNARLAADDFRTK+ETE  LR+SVEADINGLRRVLDELTLAR 
Sbjct: 153  NKILAATIDNASIVLQIDNARLAADDFRTKYETELNLRMSVEADINGLRRVLDELTLARA 212

Query: 664  DLELQIEGLKEELAYLKKNHEEEISALKGQVGGQVSVEVDSAPGIDLAKILSDMRSQYEV 843
            DLE+QIE LKEELAYL+KNHEEE++AL+GQVGG V+VE+D+APG+DL++IL++MR QYE 
Sbjct: 213  DLEMQIESLKEELAYLRKNHEEEMNALRGQVGGDVNVEMDAAPGVDLSRILNEMRDQYEK 272

Query: 844  MAEQNRKDAEAWFTSRTEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIELQSQLSMKX 1023
            MAE+NRKDAE WF ++TEELNREVA +TE LQ S+TE+T+LRR++Q LEIELQSQLSMK 
Sbjct: 273  MAEKNRKDAEEWFFTKTEELNREVATNTEALQSSRTEITELRRSVQNLEIELQSQLSMKA 332

Query: 1024 XXXXXXXXXXXRFGAQLAQIQALISGIEAQLSDVRADTERQNQEYQHLMDIKTRLEQEIA 1203
                       R+GAQLAQ+Q LIS +E QL ++R D ERQN EYQ L+D+KTRLEQEIA
Sbjct: 333  SLENSLAETEARYGAQLAQLQGLISSVEQQLCELRCDMERQNHEYQVLLDVKTRLEQEIA 392

Query: 1204 TYRNLLEGQDAN 1239
            TYR LLEG+DA+
Sbjct: 393  TYRRLLEGEDAH 404


>ref|NP_034793.1| keratin, type I cytoskeletal 17 [Mus musculus].
          Length = 433

 Score =  448 bits (1152), Expect = e-126
 Identities = 224/311 (72%), Positives = 270/311 (86%)
 Frame = +1

Query: 307  EKLTMQNLNDRLASYLEKVRALEQANGDLEVKIRDWYQKQGPGPARDYSHYFKTIEDLRD 486
            EK TMQNLNDRLASYL+KVRALE+AN +LEVKIRDWYQKQ PGPARDYS Y+ TIEDL++
Sbjct: 84   EKATMQNLNDRLASYLDKVRALEEANTELEVKIRDWYQKQAPGPARDYSAYYHTIEDLKN 143

Query: 487  KILGATIENSKIVLQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVLDELTLARTD 666
            KIL AT++N+ I+LQIDNARLAADDFRTKFETEQALR+SVEADINGLRRVLDELTLAR D
Sbjct: 144  KILVATVDNASILLQIDNARLAADDFRTKFETEQALRMSVEADINGLRRVLDELTLARAD 203

Query: 667  LELQIEGLKEELAYLKKNHEEEISALKGQVGGQVSVEVDSAPGIDLAKILSDMRSQYEVM 846
            LE+QIE LKEELAYLKKNHEEE++AL+GQVGG+++VE+D+APG+DL++ILS+MR QYE M
Sbjct: 204  LEMQIENLKEELAYLKKNHEEEMNALRGQVGGEINVEMDAAPGVDLSRILSEMRDQYEKM 263

Query: 847  AEQNRKDAEAWFTSRTEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIELQSQLSMKXX 1026
            AE+NRKDAE WF S+TEELNREVA ++E +Q  K+E+++LRRT+Q LEIELQSQLSMK  
Sbjct: 264  AEKNRKDAEDWFFSKTEELNREVATNSELVQSGKSEISELRRTMQALEIELQSQLSMKAS 323

Query: 1027 XXXXXXXXXXRFGAQLAQIQALISGIEAQLSDVRADTERQNQEYQHLMDIKTRLEQEIAT 1206
                      R+  QL+QIQ LI  +E QL+ +R + E+QNQEY+ L+D+KTRLEQEIAT
Sbjct: 324  LEGSLAETENRYCVQLSQIQGLIGSVEEQLAQLRCEMEQQNQEYKILLDVKTRLEQEIAT 383

Query: 1207 YRNLLEGQDAN 1239
            YR LLEG+DA+
Sbjct: 384  YRRLLEGEDAH 394


>ref|NP_032495.2| keratin, type I cytoskeletal 15 [Mus musculus].
          Length = 456

 Score =  445 bits (1145), Expect = e-125
 Identities = 224/312 (71%), Positives = 262/312 (83%), Gaps = 1/312 (0%)
 Frame = +1

Query: 304  NEKLTMQNLNDRLASYLEKVRALEQANGDLEVKIRDWYQKQGPG-PARDYSHYFKTIEDL 480
            NEK+TMQNLNDRLASYL+KVRALEQAN +LEVKIRDWYQKQ P  P RDYSHYFKT+E++
Sbjct: 97   NEKVTMQNLNDRLASYLDKVRALEQANTELEVKIRDWYQKQSPASPDRDYSHYFKTMEEI 156

Query: 481  RDKILGATIENSKIVLQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVLDELTLAR 660
            RDKIL ATI+NS++VL+IDNARLAADDFR K+E E  LR  VEADINGLRRVLDELTLAR
Sbjct: 157  RDKILAATIDNSRVVLEIDNARLAADDFRLKYENELTLRQGVEADINGLRRVLDELTLAR 216

Query: 661  TDLELQIEGLKEELAYLKKNHEEEISALKGQVGGQVSVEVDSAPGIDLAKILSDMRSQYE 840
            TDLE+QIE L EELAYLKKNHEEE+     Q+ GQV+VE+D+APG+DL ++L++MR QYE
Sbjct: 217  TDLEMQIEQLNEELAYLKKNHEEEMKEFSSQLAGQVNVEMDAAPGVDLTRMLAEMREQYE 276

Query: 841  VMAEQNRKDAEAWFTSRTEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIELQSQLSMK 1020
             +AE+NR+D EAWF S+TEELN+EVA +TE +Q SKTE+TDLRRTLQGLEIELQSQLSMK
Sbjct: 277  AIAEKNRRDVEAWFFSKTEELNKEVASNTEMIQTSKTEITDLRRTLQGLEIELQSQLSMK 336

Query: 1021 XXXXXXXXXXXXRFGAQLAQIQALISGIEAQLSDVRADTERQNQEYQHLMDIKTRLEQEI 1200
                        R+  QL QIQ +I+G+E QLS++R + E QNQEY  L+DIKTRLEQEI
Sbjct: 337  AGLENSLAEVECRYATQLQQIQGVITGLETQLSELRCEMEAQNQEYNMLLDIKTRLEQEI 396

Query: 1201 ATYRNLLEGQDA 1236
            ATYRNLLEGQDA
Sbjct: 397  ATYRNLLEGQDA 408


>ref|NP_058654.1| keratin, type I cytoskeletal 14 [Mus musculus].
          Length = 484

 Score =  436 bits (1122), Expect = e-122
 Identities = 216/315 (68%), Positives = 270/315 (85%)
 Frame = +1

Query: 304  NEKLTMQNLNDRLASYLEKVRALEQANGDLEVKIRDWYQKQGPGPARDYSHYFKTIEDLR 483
            +EK+TMQNLNDRLA+YL+KVRALE+AN +LEVKIRDWYQ+Q P   +DYS YFKTIEDL+
Sbjct: 120  SEKVTMQNLNDRLATYLDKVRALEEANTELEVKIRDWYQRQRPTEIKDYSPYFKTIEDLK 179

Query: 484  DKILGATIENSKIVLQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVLDELTLART 663
             KIL AT++N+ ++LQIDNARLAADDFRTKFETEQ+LR+SVEADINGLRRVLDELTLAR 
Sbjct: 180  SKILAATVDNANVLLQIDNARLAADDFRTKFETEQSLRMSVEADINGLRRVLDELTLARA 239

Query: 664  DLELQIEGLKEELAYLKKNHEEEISALKGQVGGQVSVEVDSAPGIDLAKILSDMRSQYEV 843
            DLE+QIE LKEELAYLKKNHEEE+++++GQVGG V+VE+D+APG+DL++IL++MR QYE 
Sbjct: 240  DLEMQIESLKEELAYLKKNHEEEMASMRGQVGGDVNVEMDAAPGVDLSRILNEMRDQYEK 299

Query: 844  MAEQNRKDAEAWFTSRTEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIELQSQLSMKX 1023
            MAE+NRKDAE WF S+TEELNREVA ++E +Q  K+E+++LRRT+Q LEIELQSQLSMK 
Sbjct: 300  MAEKNRKDAEEWFFSKTEELNREVATNSELVQSGKSEISELRRTMQNLEIELQSQLSMKA 359

Query: 1024 XXXXXXXXXXXRFGAQLAQIQALISGIEAQLSDVRADTERQNQEYQHLMDIKTRLEQEIA 1203
                       R+  QLAQIQ +I  +E QL+ +R + E+QNQEY+ L+D+KTRLEQEIA
Sbjct: 360  SLENNLEETKGRYCMQLAQIQEMIGSVEEQLAQLRCEMEQQNQEYKILLDVKTRLEQEIA 419

Query: 1204 TYRNLLEGQDANYNN 1248
            TYR LLEG+DA+ ++
Sbjct: 420  TYRRLLEGEDAHLSS 434


>ref|NP_034792.1| keratin, type I cytoskeletal 13 [Mus musculus].
          Length = 437

 Score =  422 bits (1086), Expect = e-118
 Identities = 216/312 (69%), Positives = 257/312 (82%), Gaps = 1/312 (0%)
 Frame = +1

Query: 304  NEKLTMQNLNDRLASYLEKVRALEQANGDLEVKIRDWYQKQGPG-PARDYSHYFKTIEDL 480
            NEK+TMQNLNDRLASYL+KVRALE AN DLEVKIRDW+ KQ P  P RDYS Y+KTIE+L
Sbjct: 95   NEKITMQNLNDRLASYLDKVRALEAANADLEVKIRDWHLKQSPASPERDYSAYYKTIEEL 154

Query: 481  RDKILGATIENSKIVLQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVLDELTLAR 660
            R KIL AT +N++I+L+IDNARLAADDFR K+E E  LR SVEADINGLRRVLDELTLA+
Sbjct: 155  RIKILEATTDNNRIILEIDNARLAADDFRLKYENELTLRQSVEADINGLRRVLDELTLAK 214

Query: 661  TDLELQIEGLKEELAYLKKNHEEEISALKGQVGGQVSVEVDSAPGIDLAKILSDMRSQYE 840
            TDLE+QIE L EELAYLKKNHEEE+     QV GQV+VE+D+ PGIDL ++L++MR QYE
Sbjct: 215  TDLEMQIESLNEELAYLKKNHEEEMKEFSNQVVGQVNVEMDATPGIDLTRVLAEMREQYE 274

Query: 841  VMAEQNRKDAEAWFTSRTEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIELQSQLSMK 1020
             +AE+NR+DAE WF +++ ELN+EV+ + E +Q SKTE+T+LRRTLQGLEIELQSQLSMK
Sbjct: 275  ALAEKNRRDAEEWFQTKSAELNKEVSSNAEMIQTSKTEITELRRTLQGLEIELQSQLSMK 334

Query: 1021 XXXXXXXXXXXXRFGAQLAQIQALISGIEAQLSDVRADTERQNQEYQHLMDIKTRLEQEI 1200
                        R+  QL QIQ LIS IEAQLS++R++ E QNQEY+ L+DIKTRLEQEI
Sbjct: 335  AGLESTLAETECRYALQLQQIQGLISSIEAQLSELRSEMECQNQEYKMLLDIKTRLEQEI 394

Query: 1201 ATYRNLLEGQDA 1236
            ATYR+LLEGQDA
Sbjct: 395  ATYRSLLEGQDA 406


>ref|NP_032496.1| keratin, type I cytoskeletal 16 [Mus musculus].
          Length = 469

 Score =  407 bits (1045), Expect = e-113
 Identities = 203/310 (65%), Positives = 255/310 (82%)
 Frame = +1

Query: 304  NEKLTMQNLNDRLASYLEKVRALEQANGDLEVKIRDWYQKQGPGPARDYSHYFKTIEDLR 483
            +EK+TMQNLNDRLA+YL+KVRALE+AN DLEVKIRDWYQ+Q P   +DYS YFKTIEDL+
Sbjct: 112  SEKVTMQNLNDRLATYLDKVRALEEANRDLEVKIRDWYQRQRPTEIKDYSPYFKTIEDLK 171

Query: 484  DKILGATIENSKIVLQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVLDELTLART 663
             KI+ AT EN++  LQIDNARLAADDFRTK+E E  LR SVE DINGLR+VLDELTL+R 
Sbjct: 172  SKIIIATQENAQFTLQIDNARLAADDFRTKYENELFLRQSVEGDINGLRKVLDELTLSRA 231

Query: 664  DLELQIEGLKEELAYLKKNHEEEISALKGQVGGQVSVEVDSAPGIDLAKILSDMRSQYEV 843
            DLE+QIE L+EELA+LKKNHEEE+ AL+GQ GG V+VE+D+APG+DL++IL++MR QYE 
Sbjct: 232  DLEMQIENLREELAFLKKNHEEEMLALRGQTGGDVNVEMDAAPGVDLSRILNEMRDQYEQ 291

Query: 844  MAEQNRKDAEAWFTSRTEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIELQSQLSMKX 1023
            MAE+NR+D EAWF  +TEELN+EVA +++ +Q +++EV +LRR  QGLEIELQSQLSMK 
Sbjct: 292  MAEKNRRDVEAWFLRKTEELNKEVASNSDLIQSNRSEVAELRRVFQGLEIELQSQLSMKA 351

Query: 1024 XXXXXXXXXXXRFGAQLAQIQALISGIEAQLSDVRADTERQNQEYQHLMDIKTRLEQEIA 1203
                       R+  QL+QIQ LIS +E QL+ +R + E+Q+QEY  L+D+KTRLEQEIA
Sbjct: 352  SLENSLEETKGRYCMQLSQIQGLISSVEEQLAQLRCEMEQQSQEYNILLDVKTRLEQEIA 411

Query: 1204 TYRNLLEGQD 1233
            TYR LL+G++
Sbjct: 412  TYRRLLDGEN 421


>ref|NP_034790.2| keratin, type I cytoskeletal 10 [Mus musculus].
          Length = 561

 Score =  375 bits (962), Expect = e-104
 Identities = 189/315 (60%), Positives = 247/315 (78%), Gaps = 3/315 (0%)
 Frame = +1

Query: 304  NEKLTMQNLNDRLASYLEKVRALEQANGDLEVKIRDWYQKQGPGPAR---DYSHYFKTIE 474
            NEK+TMQNLNDRLASY++KVRALE++N +LE KI++WY+K G    R   DYS Y+KTIE
Sbjct: 134  NEKVTMQNLNDRLASYMDKVRALEESNYELEGKIKEWYEKHGNSSQREPRDYSKYYKTIE 193

Query: 475  DLRDKILGATIENSKIVLQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVLDELTL 654
            DL+ +IL  T +N+ ++LQIDNARLAADDFR K+E E  LR SVEADINGLRRVLDELTL
Sbjct: 194  DLKGQILTLTTDNANVLLQIDNARLAADDFRLKYENEVTLRQSVEADINGLRRVLDELTL 253

Query: 655  ARTDLELQIEGLKEELAYLKKNHEEEISALKGQVGGQVSVEVDSAPGIDLAKILSDMRSQ 834
            +++DLE+QIE L EELAYLKKNHEEE+  L+    G V+VE+++APG+DL ++L++MR+Q
Sbjct: 254  SKSDLEMQIESLNEELAYLKKNHEEEMRDLQNVSTGDVNVEMNAAPGVDLTQLLNNMRNQ 313

Query: 835  YEVMAEQNRKDAEAWFTSRTEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIELQSQLS 1014
            YE +AE+NRKDAE WF  +++EL  E+  + EQ+   K+E+T+LRRT+QGLEIELQSQL+
Sbjct: 314  YEQLAEKNRKDAEEWFNQKSKELTTEIDSNIEQMSSHKSEITELRRTVQGLEIELQSQLA 373

Query: 1015 MKXXXXXXXXXXXXRFGAQLAQIQALISGIEAQLSDVRADTERQNQEYQHLMDIKTRLEQ 1194
            +K            R+  QL+QIQ+ IS +E QL  +RA+TE QN EYQ L+DIKTRLE 
Sbjct: 374  LKQSLEASLAETEGRYCVQLSQIQSQISALEEQLQQIRAETECQNAEYQQLLDIKTRLEN 433

Query: 1195 EIATYRNLLEGQDAN 1239
            EI TYR+LLEG+ ++
Sbjct: 434  EIQTYRSLLEGEGSS 448


>ref|NP_001167570.1| keratin, type I cuticular Ha6 [Mus musculus].
          Length = 473

 Score =  372 bits (955), Expect = e-103
 Identities = 185/310 (59%), Positives = 237/310 (76%)
 Frame = +1

Query: 304  NEKLTMQNLNDRLASYLEKVRALEQANGDLEVKIRDWYQKQGPGPARDYSHYFKTIEDLR 483
            NEK TMQ LNDRLA+YLEKVR LEQ N  LE +IR+WY+ Q P    DY  YFKT E+L+
Sbjct: 92   NEKATMQILNDRLANYLEKVRQLEQENTQLECRIREWYECQIPYICPDYQSYFKTAEELQ 151

Query: 484  DKILGATIENSKIVLQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVLDELTLART 663
             KIL    EN++++LQIDNA+LAADDFRTK+ETE +LR  VEADINGLRR+LDELTL + 
Sbjct: 152  QKILLTKSENARLILQIDNAKLAADDFRTKYETELSLRQLVEADINGLRRILDELTLCKA 211

Query: 664  DLELQIEGLKEELAYLKKNHEEEISALKGQVGGQVSVEVDSAPGIDLAKILSDMRSQYEV 843
            DLE Q+E LKEEL  LK+NHEEE++AL+ Q+G +++VEVD+AP +DL KIL DMR QYE 
Sbjct: 212  DLEAQVESLKEELLCLKRNHEEEVNALRSQLGDRLNVEVDAAPPVDLNKILDDMRCQYET 271

Query: 844  MAEQNRKDAEAWFTSRTEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIELQSQLSMKX 1023
            + E NR+D EAWF ++TEELN++V   +EQLQ  +TE+ +LRRT+  LEIELQ+Q SM+ 
Sbjct: 272  LVENNRRDVEAWFNTQTEELNQQVVSSSEQLQCCQTEIIELRRTVNSLEIELQAQQSMRN 331

Query: 1024 XXXXXXXXXXXRFGAQLAQIQALISGIEAQLSDVRADTERQNQEYQHLMDIKTRLEQEIA 1203
                       R+ +QL Q+Q LI+ +E+QL+++R D ERQN EYQ L+D+K RLE EIA
Sbjct: 332  SLESTLAETEARYSSQLGQMQCLITNVESQLAEIRCDLERQNHEYQVLLDVKARLESEIA 391

Query: 1204 TYRNLLEGQD 1233
            TYR LL+G+D
Sbjct: 392  TYRRLLDGED 401


>ref|NP_034791.2| keratin, type I cytoskeletal 12 [Mus musculus].
          Length = 487

 Score =  368 bits (945), Expect = e-102
 Identities = 187/311 (60%), Positives = 238/311 (76%), Gaps = 3/311 (0%)
 Frame = +1

Query: 304  NEKLTMQNLNDRLASYLEKVRALEQANGDLEVKIRDWYQKQ---GPGPARDYSHYFKTIE 474
            +EK TMQNLNDRLASYL KVR+LE+AN +LE KIR+WY+ +     G   DYS Y+  IE
Sbjct: 118  SEKETMQNLNDRLASYLGKVRSLEEANAELENKIREWYETRRTRDAGSQSDYSKYYPLIE 177

Query: 475  DLRDKILGATIENSKIVLQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVLDELTL 654
            DL++KI+ A + N++++LQIDNARLAA+DFR K+E E ALR +VEADINGLRRVLDELTL
Sbjct: 178  DLKNKIVSARVSNAQLLLQIDNARLAAEDFRMKYENELALRQTVEADINGLRRVLDELTL 237

Query: 655  ARTDLELQIEGLKEELAYLKKNHEEEISALKGQVGGQVSVEVDSAPGIDLAKILSDMRSQ 834
             R DLE Q+E L EELAY+KKNHEEE+ + +    G+V+VE+D+APG+DL K+L++MR+Q
Sbjct: 238  TRADLEAQLETLTEELAYMKKNHEEELQSFQAGGPGEVNVEMDAAPGVDLTKVLNEMRAQ 297

Query: 835  YEVMAEQNRKDAEAWFTSRTEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIELQSQLS 1014
            YE MAEQNRKDAEAWF  ++ EL +E++ +TEQLQ SK+EVTDL+R +Q LEIELQSQL+
Sbjct: 298  YEAMAEQNRKDAEAWFLEKSRELRKEISSNTEQLQSSKSEVTDLKRMVQNLEIELQSQLA 357

Query: 1015 MKXXXXXXXXXXXXRFGAQLAQIQALISGIEAQLSDVRADTERQNQEYQHLMDIKTRLEQ 1194
            MK             +  QL+Q+Q LI  +E QL  VRAD ERQN ++Q L+ +K RLE 
Sbjct: 358  MKSSLEGSLAETEGGYCCQLSQVQQLIGSLEEQLQQVRADAERQNADHQRLLGVKARLEM 417

Query: 1195 EIATYRNLLEG 1227
            EI TYR LLEG
Sbjct: 418  EIETYRRLLEG 428


  Database: RefSeq49_MP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 15,617,559
  Number of sequences in database:  30,036
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 41,110,282
Number of extensions: 1190863
Number of successful extensions: 7495
Number of sequences better than 1.0e-05: 89
Number of HSP's gapped: 7055
Number of HSP's successfully gapped: 91
Length of query: 471
Length of database: 15,617,559
Length adjustment: 105
Effective length of query: 366
Effective length of database: 12,463,779
Effective search space: 4561743114
Effective search space used: 4561743114
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-001863
         (1415 letters)

Database: RefSeq49_SP.fasta 
           24,897 sequences; 11,343,932 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_003131485.1| PREDICTED: keratin, type I cytoskeletal 19-l...   622   e-178
Alignment   gi|XP_003131486.1| PREDICTED: keratin, type I cytoskeletal 15-l...   436   e-122
Alignment   gi|XP_003131484.1| PREDICTED: keratin, type I cytoskeletal 13-l...   424   e-119
Alignment   gi|XP_003131509.1| PREDICTED: keratin, type I cytoskeletal 12 [...   381   e-106
Alignment   gi|XP_003131508.1| PREDICTED: keratin, type I cytoskeletal 10-l...   376   e-104
Alignment   gi|XP_003131480.2| PREDICTED: keratin, type I cuticular Ha6 iso...   374   e-104
Alignment   gi|XP_003131482.2| PREDICTED: keratin, type I cuticular Ha5-lik...   354   8e-98
Alignment   gi|XP_003131481.1| PREDICTED: keratin, type I cuticular Ha2 [Su...   350   8e-97
Alignment   gi|XP_003131477.1| PREDICTED: keratin, type I microfibrillar 48...   348   3e-96
Alignment   gi|XP_003131478.1| PREDICTED: LOW QUALITY PROTEIN: keratin, typ...   345   4e-95

>ref|XP_003131485.1| PREDICTED: keratin, type I cytoskeletal 19-like [Sus scrofa].
          Length = 404

 Score =  622 bits (1603), Expect = e-178
 Identities = 333/390 (85%), Positives = 333/390 (85%)
 Frame = +1

Query: 100  FGGLGGGSVRFSAGGAFRAPSIHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 279
            FGGLGGGSVRFSAGGAFRAPSIH                                     
Sbjct: 15   FGGLGGGSVRFSAGGAFRAPSIHGGSGGRGVSVSSARFVSSSSSGGYGGGYGGGYAGALA 74

Query: 280  XXXXXXXXNEKLTMQNLNDRLASYLEKVRALEQANGDLEVKIRDWYQKQGPGPARDYSHY 459
                    NEKLTMQNLNDRLASYLEKVRALEQANGDLEVKIRDWYQKQGPGPARDYSHY
Sbjct: 75   GSDGLLAGNEKLTMQNLNDRLASYLEKVRALEQANGDLEVKIRDWYQKQGPGPARDYSHY 134

Query: 460  FKTIEDLRDKILGATIENSKIVLQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVL 639
            FKTIEDLRDKILGATIENSKIVLQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVL
Sbjct: 135  FKTIEDLRDKILGATIENSKIVLQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVL 194

Query: 640  DELTLARTDLELQIEGLKEELAYLKKNHEEEISALKGQVGGQVSVEVDSAPGIDLAKILS 819
            DELTLARTDLELQIEGLKEELAYLKKNHEEEISALKGQVGGQVSVEVDSAPGIDLAKILS
Sbjct: 195  DELTLARTDLELQIEGLKEELAYLKKNHEEEISALKGQVGGQVSVEVDSAPGIDLAKILS 254

Query: 820  DMRSQYEVMAEQNRKDAEAWFTSRTEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIEL 999
            DMRSQYEVMAEQNRKDAEAWFTSRTEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIEL
Sbjct: 255  DMRSQYEVMAEQNRKDAEAWFTSRTEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIEL 314

Query: 1000 QSQLSMKXXXXXXXXXXXXRFGAQLAQIQALISGIEAQLSDVRADTERQNQEYQHLMDIK 1179
            QSQLSMK            RFGAQLAQIQALISGIEAQLSDVRADTERQNQEYQHLMDIK
Sbjct: 315  QSQLSMKAALEGTLAETEARFGAQLAQIQALISGIEAQLSDVRADTERQNQEYQHLMDIK 374

Query: 1180 TRLEQEIATYRNLLEGQDANYNNLTIIKAL 1269
            TRLEQEIATYRNLLEGQDANYNNLTIIKAL
Sbjct: 375  TRLEQEIATYRNLLEGQDANYNNLTIIKAL 404


>ref|XP_003131486.1| PREDICTED: keratin, type I cytoskeletal 15-like [Sus scrofa].
          Length = 460

 Score =  436 bits (1120), Expect = e-122
 Identities = 218/312 (69%), Positives = 260/312 (83%), Gaps = 1/312 (0%)
 Frame = +1

Query: 304  NEKLTMQNLNDRLASYLEKVRALEQANGDLEVKIRDWYQKQGPG-PARDYSHYFKTIEDL 480
            NEK+TMQNLNDRLASYL+KVRALE+AN DLEVKI DWY+KQ P  P RDYS YFKT+E+L
Sbjct: 110  NEKITMQNLNDRLASYLDKVRALEEANADLEVKIHDWYKKQSPSSPERDYSPYFKTMEEL 169

Query: 481  RDKILGATIENSKIVLQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVLDELTLAR 660
            RDKI  A I+NS+++L+IDNARLAADDFR K+E E ALR  VEADINGLRRVLDELTL +
Sbjct: 170  RDKIRAAAIDNSRVILEIDNARLAADDFRLKYENELALRQGVEADINGLRRVLDELTLTK 229

Query: 661  TDLELQIEGLKEELAYLKKNHEEEISALKGQVGGQVSVEVDSAPGIDLAKILSDMRSQYE 840
            TDLE+QIE L EELAYLKKNHEEE+     Q+ GQV+VE+D+APG+DL ++L++MR QYE
Sbjct: 230  TDLEMQIESLNEELAYLKKNHEEEMKEFSNQLAGQVNVEMDAAPGVDLTRVLAEMREQYE 289

Query: 841  VMAEQNRKDAEAWFTSRTEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIELQSQLSMK 1020
             +AE+NR+DAEAWF S+TEELN+EVA +TE +Q SKTE+TDLRRT+QGLEIELQSQLSMK
Sbjct: 290  AIAEKNRRDAEAWFFSKTEELNKEVASNTEMIQTSKTEITDLRRTVQGLEIELQSQLSMK 349

Query: 1021 XXXXXXXXXXXXRFGAQLAQIQALISGIEAQLSDVRADTERQNQEYQHLMDIKTRLEQEI 1200
                        R+  QL QIQ LI G+E QLS++R++ E QNQEY+ L+DIKTRLEQEI
Sbjct: 350  AGLESSLAETECRYATQLQQIQGLIGGLETQLSELRSEMECQNQEYKMLLDIKTRLEQEI 409

Query: 1201 ATYRNLLEGQDA 1236
            ATYR+LLEGQDA
Sbjct: 410  ATYRSLLEGQDA 421


>ref|XP_003131484.1| PREDICTED: keratin, type I cytoskeletal 13-like [Sus scrofa].
          Length = 454

 Score =  424 bits (1089), Expect = e-119
 Identities = 217/312 (69%), Positives = 253/312 (81%), Gaps = 1/312 (0%)
 Frame = +1

Query: 304  NEKLTMQNLNDRLASYLEKVRALEQANGDLEVKIRDWYQKQGPG-PARDYSHYFKTIEDL 480
            NEK+TMQNLNDRLASYLEKVRALE+AN DLEVKIRDWYQKQ P  P RDYS YFKTIE+L
Sbjct: 101  NEKITMQNLNDRLASYLEKVRALEEANTDLEVKIRDWYQKQSPSSPERDYSPYFKTIEEL 160

Query: 481  RDKILGATIENSKIVLQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVLDELTLAR 660
            RDKI  A IEN+++VLQIDNARLAADDFR K+E E  LR SVEADINGLRRVLDELTL +
Sbjct: 161  RDKIQAANIENNRVVLQIDNARLAADDFRLKYENELTLRQSVEADINGLRRVLDELTLTK 220

Query: 661  TDLELQIEGLKEELAYLKKNHEEEISALKGQVGGQVSVEVDSAPGIDLAKILSDMRSQYE 840
            TDLE+QIE L EELA+LKKNHEEE+     +V GQV+VE+D+ PG+DL ++L++MR QYE
Sbjct: 221  TDLEMQIESLNEELAFLKKNHEEEMKEFSNRVVGQVNVEMDATPGVDLTRVLAEMREQYE 280

Query: 841  VMAEQNRKDAEAWFTSRTEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIELQSQLSMK 1020
             MAE+NR++AE WF  + EELN+EV   T  +Q SKTE+T+LRRTLQGLEIELQSQLS K
Sbjct: 281  AMAEKNRREAEEWFNKKIEELNKEVISSTALIQTSKTEITELRRTLQGLEIELQSQLSTK 340

Query: 1021 XXXXXXXXXXXXRFGAQLAQIQALISGIEAQLSDVRADTERQNQEYQHLMDIKTRLEQEI 1200
                        R+  QL QIQ LI  IEAQLS++R++ E QNQEY+ L+DIKTRLEQEI
Sbjct: 341  AGLENSLAETECRYALQLQQIQGLIGSIEAQLSELRSEMECQNQEYKMLLDIKTRLEQEI 400

Query: 1201 ATYRNLLEGQDA 1236
            ATYR+LLEGQDA
Sbjct: 401  ATYRSLLEGQDA 412


>ref|XP_003131509.1| PREDICTED: keratin, type I cytoskeletal 12 [Sus scrofa].
          Length = 494

 Score =  381 bits (978), Expect = e-106
 Identities = 197/314 (62%), Positives = 244/314 (77%), Gaps = 5/314 (1%)
 Frame = +1

Query: 304  NEKLTMQNLNDRLASYLEKVRALEQANGDLEVKIRDWYQKQGPGPA-----RDYSHYFKT 468
            +EK TM+NLNDRLASYL+KVRALE+AN DLE KIR+WY+ +G G        DYS YF  
Sbjct: 123  SEKETMKNLNDRLASYLDKVRALEEANTDLENKIREWYETRGSGTGDPRSQSDYSKYFPL 182

Query: 469  IEDLRDKILGATIENSKIVLQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVLDEL 648
            IE+L++KI+ A+I N++++LQIDNARLAA+DFR K+E E AL  +VEADINGLRRVLDEL
Sbjct: 183  IEELKNKIISASIANAQLILQIDNARLAAEDFRMKYENEVALCQNVEADINGLRRVLDEL 242

Query: 649  TLARTDLELQIEGLKEELAYLKKNHEEEISALKGQVGGQVSVEVDSAPGIDLAKILSDMR 828
            TL R DLE QIE L EELAYLKKNHEEE+ + +    GQVSVE+D+APG+DL K+L+DMR
Sbjct: 243  TLVRADLETQIETLNEELAYLKKNHEEELQSFRAGGPGQVSVEMDAAPGVDLTKLLNDMR 302

Query: 829  SQYEVMAEQNRKDAEAWFTSRTEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIELQSQ 1008
            +QYE +AEQNRKDAEAWF  ++ EL +E++ +TEQLQ SK+EVTDLRR LQ LEIELQSQ
Sbjct: 303  AQYEAIAEQNRKDAEAWFIEKSGELRKEISTNTEQLQSSKSEVTDLRRALQNLEIELQSQ 362

Query: 1009 LSMKXXXXXXXXXXXXRFGAQLAQIQALISGIEAQLSDVRADTERQNQEYQHLMDIKTRL 1188
            L+MK             + AQL+Q+Q LI G+E QL  VRAD ERQN +YQ L+++K RL
Sbjct: 363  LAMKKSLEDSLAETEGDYCAQLSQVQQLIGGLEEQLLQVRADAERQNADYQRLLNVKARL 422

Query: 1189 EQEIATYRNLLEGQ 1230
            E EI TYR LL+G+
Sbjct: 423  ELEIETYRRLLDGE 436


>ref|XP_003131508.1| PREDICTED: keratin, type I cytoskeletal 10-like [Sus scrofa].
          Length = 613

 Score =  376 bits (966), Expect = e-104
 Identities = 190/315 (60%), Positives = 246/315 (78%), Gaps = 3/315 (0%)
 Frame = +1

Query: 304  NEKLTMQNLNDRLASYLEKVRALEQANGDLEVKIRDWYQKQGP---GPARDYSHYFKTIE 474
            NEK+TMQNLNDRLASYL+KVRALE +N +LEVKI++WY K G       RDYS Y+K IE
Sbjct: 157  NEKVTMQNLNDRLASYLDKVRALEDSNYELEVKIKEWYDKHGNVGRREPRDYSKYYKIIE 216

Query: 475  DLRDKILGATIENSKIVLQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVLDELTL 654
            DL+++I+  T++N+ I++Q+DNARLAADDFR K+E E  LR SVEADINGLRRVLDELTL
Sbjct: 217  DLKNQIINLTVDNANILIQVDNARLAADDFRMKYENEVTLRQSVEADINGLRRVLDELTL 276

Query: 655  ARTDLELQIEGLKEELAYLKKNHEEEISALKGQVGGQVSVEVDSAPGIDLAKILSDMRSQ 834
             +TDLE+QIE L EELAYLKKNHEEE+  L+    G V+VE+++APG+DL ++L++MRSQ
Sbjct: 277  TKTDLEMQIESLNEELAYLKKNHEEEMRDLQNVSTGDVNVEMNAAPGVDLTELLNNMRSQ 336

Query: 835  YEVMAEQNRKDAEAWFTSRTEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIELQSQLS 1014
            YE +AEQNR+DAEAWF  +++EL  E+  + EQ+   K+E+T+LRRT+QGLEIELQSQL+
Sbjct: 337  YEQLAEQNRRDAEAWFNEKSKELTTEINTNIEQVSSYKSEITELRRTIQGLEIELQSQLA 396

Query: 1015 MKXXXXXXXXXXXXRFGAQLAQIQALISGIEAQLSDVRADTERQNQEYQHLMDIKTRLEQ 1194
            +K            R+  QLAQIQ+ I+ +E QL  +RA+TE QN EYQ L+DIK RLE 
Sbjct: 397  LKQSLEASLAETEGRYCVQLAQIQSQITALEEQLQQIRAETECQNAEYQQLLDIKIRLEN 456

Query: 1195 EIATYRNLLEGQDAN 1239
            EI TYR+LLEG+ ++
Sbjct: 457  EIQTYRSLLEGEGSS 471


>ref|XP_003131480.2| PREDICTED: keratin, type I cuticular Ha6 isoform 2 [Sus scrofa].
          Length = 459

 Score =  374 bits (960), Expect = e-104
 Identities = 187/310 (60%), Positives = 238/310 (76%)
 Frame = +1

Query: 304  NEKLTMQNLNDRLASYLEKVRALEQANGDLEVKIRDWYQKQGPGPARDYSHYFKTIEDLR 483
            NEK TMQ LNDRLA+YLEKVR LE+ N +LE +IR+WY+ Q P    DY  YFKTIE+L+
Sbjct: 92   NEKETMQFLNDRLANYLEKVRQLERDNAELESRIREWYESQIPYICPDYQAYFKTIEELQ 151

Query: 484  DKILGATIENSKIVLQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVLDELTLART 663
             KIL    +N+++VLQIDNA+LAADDFRTK+ETE  +R  VEAD NGLRR+LDELTL + 
Sbjct: 152  QKILITKADNARLVLQIDNAKLAADDFRTKYETELGMRQLVEADTNGLRRILDELTLCKA 211

Query: 664  DLELQIEGLKEELAYLKKNHEEEISALKGQVGGQVSVEVDSAPGIDLAKILSDMRSQYEV 843
            DLE+Q+E LKEEL  LKKNHEEE++ L+ Q+G +++VEVD+AP +DL KIL DMR QYE 
Sbjct: 212  DLEMQVESLKEELICLKKNHEEEVNTLRCQLGDRLNVEVDAAPPVDLNKILDDMRCQYEA 271

Query: 844  MAEQNRKDAEAWFTSRTEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIELQSQLSMKX 1023
            + E NR+D EAWF ++TEELN++V   +EQLQ  +TE+ +LRR +  LEIELQ+Q SM+ 
Sbjct: 272  LVENNRRDVEAWFNTQTEELNQQVVSSSEQLQCCQTEIIELRRNVNALEIELQAQHSMRN 331

Query: 1024 XXXXXXXXXXXRFGAQLAQIQALISGIEAQLSDVRADTERQNQEYQHLMDIKTRLEQEIA 1203
                       R+ +QLAQ+Q LIS +EAQL+++R D ERQNQEYQ L+D+K RLE EIA
Sbjct: 332  SLEATLAETEARYSSQLAQMQGLISNVEAQLAEIRCDLERQNQEYQVLLDVKARLESEIA 391

Query: 1204 TYRNLLEGQD 1233
            TYR LLEG+D
Sbjct: 392  TYRRLLEGED 401


>ref|XP_003131482.2| PREDICTED: keratin, type I cuticular Ha5-like [Sus scrofa].
          Length = 493

 Score =  354 bits (908), Expect = 8e-98
 Identities = 174/310 (56%), Positives = 237/310 (76%)
 Frame = +1

Query: 304  NEKLTMQNLNDRLASYLEKVRALEQANGDLEVKIRDWYQKQGPGPARDYSHYFKTIEDLR 483
            NEK TMQ+LNDRLASYLEKVR LE+ N +LE +IR+W ++Q P    DY  YF+TIE+L+
Sbjct: 134  NEKETMQSLNDRLASYLEKVRRLERENSELEGRIREWCEQQEPYLCPDYQSYFQTIEELQ 193

Query: 484  DKILGATIENSKIVLQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVLDELTLART 663
             K L    EN+++V+QIDNA+LAADDFR+K+ETE ++R  VE+D+NGLRR+LD+LTL + 
Sbjct: 194  KKTLCTKAENARLVVQIDNAKLAADDFRSKYETEVSMRQLVESDMNGLRRILDDLTLCKA 253

Query: 664  DLELQIEGLKEELAYLKKNHEEEISALKGQVGGQVSVEVDSAPGIDLAKILSDMRSQYEV 843
            DLE Q+E LKEEL  LKKNHEEE+++L+ Q+G +++VEVD+AP +DL ++L +MR QYE 
Sbjct: 254  DLEAQVESLKEELLCLKKNHEEEVNSLRCQLGDRLNVEVDAAPPVDLNRVLDEMRCQYET 313

Query: 844  MAEQNRKDAEAWFTSRTEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIELQSQLSMKX 1023
            + E NR+DAE WF ++TEELN++V   +EQLQ  + ++ +LRR +  LEIELQ+Q SM+ 
Sbjct: 314  LVENNRRDAEDWFNTQTEELNQQVVTSSEQLQSCQADIMELRRNVNALEIELQAQHSMRD 373

Query: 1024 XXXXXXXXXXXRFGAQLAQIQALISGIEAQLSDVRADTERQNQEYQHLMDIKTRLEQEIA 1203
                       R+ +QLAQ+Q LI  +EAQL+++RAD ERQNQEYQ L+D++ RLE EI 
Sbjct: 374  ALESTLAETEARYSSQLAQMQGLIGNVEAQLAEIRADLERQNQEYQVLLDVRARLESEIN 433

Query: 1204 TYRNLLEGQD 1233
            TYR LLE +D
Sbjct: 434  TYRGLLESED 443


>ref|XP_003131481.1| PREDICTED: keratin, type I cuticular Ha2 [Sus scrofa].
          Length = 460

 Score =  350 bits (899), Expect = 8e-97
 Identities = 176/310 (56%), Positives = 233/310 (75%)
 Frame = +1

Query: 304  NEKLTMQNLNDRLASYLEKVRALEQANGDLEVKIRDWYQKQGPGPARDYSHYFKTIEDLR 483
            NEK T+Q LNDRLA YLEKVR LEQ N +LE KI++  Q Q P  + +Y  YF+TIE+L+
Sbjct: 107  NEKETLQFLNDRLAKYLEKVRQLEQDNAELESKIQEASQSQVPTLSSNYHSYFRTIEELQ 166

Query: 484  DKILGATIENSKIVLQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVLDELTLART 663
             KIL    EN++ ++ +DNA+LAADDFRTK+ETE A+R  VEAD NGLRR+LDELTL + 
Sbjct: 167  QKILCTRAENARTIVHMDNAKLAADDFRTKYETELAMRQLVEADTNGLRRILDELTLCKA 226

Query: 664  DLELQIEGLKEELAYLKKNHEEEISALKGQVGGQVSVEVDSAPGIDLAKILSDMRSQYEV 843
            DLE+Q+E LKEEL  LKKNHEEE+ AL+GQ+G ++++EVD+AP +DL ++L +MR QYE 
Sbjct: 227  DLEMQVESLKEELMCLKKNHEEEVGALQGQLGDRLNIEVDAAPPVDLNRVLEEMRCQYEA 286

Query: 844  MAEQNRKDAEAWFTSRTEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIELQSQLSMKX 1023
            + E NR+D E WFT + EELN++VA  +EQLQ  +++  DLRRT+  LEIELQ+Q S++ 
Sbjct: 287  LVESNRRDVEEWFTMQMEELNQQVATSSEQLQSYQSDAIDLRRTVNMLEIELQAQHSLRD 346

Query: 1024 XXXXXXXXXXXRFGAQLAQIQALISGIEAQLSDVRADTERQNQEYQHLMDIKTRLEQEIA 1203
                       R+ +QLAQ+Q LI  +EAQL+++RAD ERQNQEYQ L+D++ RLE EI 
Sbjct: 347  SLENTLTETEARYSSQLAQVQGLIGNVEAQLAEIRADLERQNQEYQVLLDVRARLECEIN 406

Query: 1204 TYRNLLEGQD 1233
            TYR LLE +D
Sbjct: 407  TYRGLLESED 416


>ref|XP_003131477.1| PREDICTED: keratin, type I microfibrillar 48 kDa, component 8C-1-like
            [Sus scrofa].
          Length = 414

 Score =  348 bits (894), Expect = 3e-96
 Identities = 174/310 (56%), Positives = 234/310 (75%)
 Frame = +1

Query: 304  NEKLTMQNLNDRLASYLEKVRALEQANGDLEVKIRDWYQKQGPGPARDYSHYFKTIEDLR 483
            NEK TMQ LNDRLASYLEKVR LE+ N +LE +I++  Q+Q P    +Y  YF+TIE+L+
Sbjct: 55   NEKETMQFLNDRLASYLEKVRQLERDNAELERQIQERSQQQEPLVCPNYQSYFRTIEELQ 114

Query: 484  DKILGATIENSKIVLQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVLDELTLART 663
             KIL +  EN+++V+QIDNA+LAADDFRTK+ETE  LR  VE+DINGLRR+LDELTL + 
Sbjct: 115  QKILCSKSENARLVVQIDNAKLAADDFRTKYETELGLRQLVESDINGLRRILDELTLCKA 174

Query: 664  DLELQIEGLKEELAYLKKNHEEEISALKGQVGGQVSVEVDSAPGIDLAKILSDMRSQYEV 843
            DLE Q+E LKEEL  LK NHEEE+++L+ Q+G ++++EVD+AP +DL  +LS+ RSQYE 
Sbjct: 175  DLEAQVESLKEELLCLKSNHEEEVNSLRSQLGDRLNIEVDAAPTVDLNSVLSETRSQYEA 234

Query: 844  MAEQNRKDAEAWFTSRTEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIELQSQLSMKX 1023
            + E NR+D E WF  +TEELN++V   +EQLQ  + E+ +LRRT+  LE+ELQ+Q +++ 
Sbjct: 235  LVETNRRDVEEWFARQTEELNKQVVSSSEQLQSYQAEIIELRRTVNALEVELQAQHNLRD 294

Query: 1024 XXXXXXXXXXXRFGAQLAQIQALISGIEAQLSDVRADTERQNQEYQHLMDIKTRLEQEIA 1203
                       R+ +QLAQ+Q LI  +EAQL+++RAD ERQNQEYQ L+D++ RLE EI 
Sbjct: 295  SLENTLTETEARYSSQLAQVQGLIGNVEAQLAEIRADLERQNQEYQVLLDVRARLECEIN 354

Query: 1204 TYRNLLEGQD 1233
            TYR LLE +D
Sbjct: 355  TYRGLLESED 364


>ref|XP_003131478.1| PREDICTED: LOW QUALITY PROTEIN: keratin, type I cuticular Ha4-like
            [Sus scrofa].
          Length = 435

 Score =  345 bits (885), Expect = 4e-95
 Identities = 170/310 (54%), Positives = 234/310 (75%)
 Frame = +1

Query: 304  NEKLTMQNLNDRLASYLEKVRALEQANGDLEVKIRDWYQKQGPGPARDYSHYFKTIEDLR 483
            NEK TMQ LNDRLASYLEKVR LE+ N +LE +I++  Q+Q P    +Y  YF+TIE+L+
Sbjct: 99   NEKETMQFLNDRLASYLEKVRQLERDNAELERQIQERSQQQEPLVCPNYQSYFRTIEELQ 158

Query: 484  DKILGATIENSKIVLQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVLDELTLART 663
             KIL A  EN+++V+Q+DNA+LAADDFRTK+E E++ R  VE+DIN LRR+LDELTL + 
Sbjct: 159  QKILSAKSENTRLVVQVDNAKLAADDFRTKYEVERSSRQLVESDINSLRRILDELTLCKA 218

Query: 664  DLELQIEGLKEELAYLKKNHEEEISALKGQVGGQVSVEVDSAPGIDLAKILSDMRSQYEV 843
            DLE Q+E L+EEL  LKKNHEEE+++L+ Q+G ++++EVD+AP +DL  +L++ RSQYE 
Sbjct: 219  DLETQVESLREELLCLKKNHEEEVNSLRSQLGDRLNIEVDAAPTVDLNSVLNETRSQYEA 278

Query: 844  MAEQNRKDAEAWFTSRTEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIELQSQLSMKX 1023
            + E NR+D E WF  +TEELN++V   +EQLQ  + E+ +LRRT+  LE+ELQ+Q +++ 
Sbjct: 279  LVETNRRDVEEWFARQTEELNKQVVSSSEQLQSYQAEIIELRRTVNALEVELQAQHNLRD 338

Query: 1024 XXXXXXXXXXXRFGAQLAQIQALISGIEAQLSDVRADTERQNQEYQHLMDIKTRLEQEIA 1203
                       R+ +QLAQ+Q LI  +EAQL+++RAD ERQNQEYQ L+D++ RLE EI 
Sbjct: 339  SLENTLTETEARYSSQLAQVQGLIGNVEAQLAEIRADLERQNQEYQVLLDVRARLECEIN 398

Query: 1204 TYRNLLEGQD 1233
            TYR LLE +D
Sbjct: 399  TYRGLLESED 408


  Database: RefSeq49_SP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 11,343,932
  Number of sequences in database:  24,897
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 31,449,756
Number of extensions: 966852
Number of successful extensions: 6671
Number of sequences better than 1.0e-05: 64
Number of HSP's gapped: 6344
Number of HSP's successfully gapped: 66
Length of query: 471
Length of database: 11,343,932
Length adjustment: 103
Effective length of query: 368
Effective length of database: 8,779,541
Effective search space: 3230871088
Effective search space used: 3230871088
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

BLASTN 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-001863
         (1415 letters)

Database: Sscrofa_10.2.fasta 
           4582 sequences; 2,808,509,378 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Sscrofa_Chr12                                                         666   0.0  
Sscrofa_Chr05                                                          64   2e-07

>Sscrofa_Chr12 
||          Length = 63588571

 Score =  666 bits (336), Expect = 0.0
 Identities = 369/382 (96%), Gaps = 3/382 (0%)
 Strand = Plus / Plus

                                                                            
Query: 1017     gaaagccgccctggaaggcacgctggcggaaacggaggctcgcttcggagcccagctggc 1076
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21539895 gaaagccgccctggaaggcacgctggcggaaacggaggctcgcttcggagcccagctggc 21539954

                                                                            
Query: 1077     acagatccaggcgctgatcagtgggatcgaagcccagctgagcgacgtgcgagccgacac 1136
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21539955 acagatccaggcgctgatcagtgggatcgaagcccagctgagcgacgtgcgagccgacac 21540014

                                                                            
Query: 1137     cgagcggcagaaccaggagtaccagcatctcatggacatcaagacgcggctggagcagga 1196
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21540015 cgagcggcagaaccaggagtaccagcatctcatggacatcaagacgcggctggagcagga 21540074

                                                                            
Query: 1197     gatcgccacctaccgcaacctgctggagggccaggacgccaactacaacaacctgaccat 1256
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21540075 gatcgccacctaccgcaacctgctggagggccaggacgccaactacaacaacctgaccat 21540134

                                                                            
Query: 1257     catcaaggccctctgagtccacagcatcctgggcttcctgccctgctgctgaggaagtcc 1316
                |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 21540135 catcaaggccctctgagtccacagcatcctgggcttcctgccctactgctgaggaagtcc 21540194

                                                                            
Query: 1317     cctgggcaggggtnnnnnnnnnnacctttaccccaggctctccccttgacctgccaataa 1376
                ||||||||||||           |||||||||||||||||||||||| ||||||||||||
Sbjct: 21540195 cctgggcagggg---ggggggggacctttaccccaggctctccccttcacctgccaataa 21540251

                                      
Query: 1377     aacgtttatggcccgagggagg 1398
                ||||||||||||||||||||||
Sbjct: 21540252 aacgtttatggcccgagggagg 21540273



 Score =  454 bits (229), Expect = e-125
 Identities = 229/229 (100%)
 Strand = Plus / Plus

                                                                            
Query: 1        attcctccagccgccccgcagcacctccgaccggtgtcgcccgcgtctgccttcgccatg 60
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21536799 attcctccagccgccccgcagcacctccgaccggtgtcgcccgcgtctgccttcgccatg 21536858

                                                                            
Query: 61       acttcctacagctatcgccagtcgtcggccacctcgtccttcgggggtctgggcggcggc 120
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21536859 acttcctacagctatcgccagtcgtcggccacctcgtccttcgggggtctgggcggcggc 21536918

                                                                            
Query: 121      tccgtgcgcttcagcgcgggaggcgccttccgcgcccccagcatccacgggggctccggc 180
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21536919 tccgtgcgcttcagcgcgggaggcgccttccgcgcccccagcatccacgggggctccggc 21536978

                                                                 
Query: 181      ggccgcggcgtgtcggtgtcgtccgcccgcttcgtgtcctcgtcctcct 229
                |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21536979 ggccgcggcgtgtcggtgtcgtccgcccgcttcgtgtcctcgtcctcct 21537027



 Score =  389 bits (196), Expect = e-105
 Identities = 196/196 (100%)
 Strand = Plus / Plus

                                                                            
Query: 294      gctggcgggcaacgagaagctcaccatgcagaacctcaacgaccgcctggcctcctacct 353
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21537092 gctggcgggcaacgagaagctcaccatgcagaacctcaacgaccgcctggcctcctacct 21537151

                                                                            
Query: 354      ggagaaggtgcgcgccttggagcaggccaacggtgacctggaggtgaagatccgcgactg 413
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21537152 ggagaaggtgcgcgccttggagcaggccaacggtgacctggaggtgaagatccgcgactg 21537211

                                                                            
Query: 414      gtaccagaagcaggggcccgggcctgcccgcgactacagccactacttcaagaccatcga 473
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21537212 gtaccagaagcaggggcccgggcctgcccgcgactacagccactacttcaagaccatcga 21537271

                                
Query: 474      ggacctgcgggacaag 489
                ||||||||||||||||
Sbjct: 21537272 ggacctgcgggacaag 21537287



 Score =  325 bits (164), Expect = 4e-86
 Identities = 164/164 (100%)
 Strand = Plus / Plus

                                                                            
Query: 728      aggaaatcagtgccctgaagggccaggtgggcggccaggtcagtgtggaggttgattcgg 787
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21539379 aggaaatcagtgccctgaagggccaggtgggcggccaggtcagtgtggaggttgattcgg 21539438

                                                                            
Query: 788      ctccgggcatcgacctagccaagatcctgagcgacatgagaagccagtatgaggtcatgg 847
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21539439 ctccgggcatcgacctagccaagatcctgagcgacatgagaagccagtatgaggtcatgg 21539498

                                                            
Query: 848      ctgagcagaaccggaaggatgctgaggcctggttcaccagccgg 891
                ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21539499 ctgagcagaaccggaaggatgctgaggcctggttcaccagccgg 21539542



 Score =  305 bits (154), Expect = 4e-80
 Identities = 157/158 (99%)
 Strand = Plus / Plus

                                                                            
Query: 573      gttcgagacagagcaggccctgcgcctgagcgtggaggccgacatcaacggcctgcgcag 632
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21538976 gttcgagacagagcaggccctgcgcctgagcgtggaggccgacatcaacggcctgcgcag 21539035

                                                                            
Query: 633      ggtgctggacgagctgaccctggccaggactgacctggagctgcagatcgaaggcctgaa 692
                |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 21539036 ggtgctggacgagctgaccctggccaggaccgacctggagctgcagatcgaaggcctgaa 21539095

                                                      
Query: 693      ggaagagctggcctacctgaagaagaaccacgaggagg 730
                ||||||||||||||||||||||||||||||||||||||
Sbjct: 21539096 ggaagagctggcctacctgaagaagaaccacgaggagg 21539133



 Score =  254 bits (128), Expect = 1e-64
 Identities = 158/168 (94%)
 Strand = Plus / Plus

                                                                            
Query: 316      accatgcagaacctcaacgaccgcctggcctcctacctggagaaggtgcgcgccttggag 375
                ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||
Sbjct: 21316374 accatgcagaacctcaacgaccgcctggcctcctacctggacaaggtgcgcgccctggag 21316433

                                                                            
Query: 376      caggccaacggtgacctggaggtgaagatccgcgactggtaccagaagcaggggcccggg 435
                 |||||||||  ||||||||||||||||||| |||||||||| |||||||||| ||||||
Sbjct: 21316434 gaggccaacgccgacctggaggtgaagatccacgactggtacaagaagcagggccccggg 21316493

                                                                
Query: 436      cctgcccgcgactacagccactacttcaagaccatcgaggacctgcgg 483
                ||||||||||||||||||  ||||||||||||||||||||||||||||
Sbjct: 21316494 cctgcccgcgactacagcgcctacttcaagaccatcgaggacctgcgg 21316541



 Score =  244 bits (123), Expect = 1e-61
 Identities = 126/127 (99%)
 Strand = Plus / Plus

                                                                            
Query: 891      gactgaggagctgaaccgggaggtcgctggccacacggagcagctgcagatcagcaagac 950
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21539633 gactgaggagctgaaccgggaggtcgctggccacacggagcagctgcagatcagcaagac 21539692

                                                                            
Query: 951      ggaggtcaccgatctgcggcgcaccctccagggtctggagatcgagctgcagtctcagct 1010
                ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21539693 ggaagtcaccgatctgcggcgcaccctccagggtctggagatcgagctgcagtctcagct 21539752

                       
Query: 1011     cagcatg 1017
                |||||||
Sbjct: 21539753 cagcatg 21539759



 Score =  228 bits (115), Expect = 7e-57
 Identities = 160/175 (91%)
 Strand = Plus / Plus

                                                                            
Query: 306      cgagaagctcaccatgcagaacctcaacgaccgcctggcctcctacctggagaaggtgcg 365
                |||||||  |||||||||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 21326641 cgagaaggccaccatgcagaacctcaatgaccgcctggcctcctacctggacaaggtgcg 21326700

                                                                            
Query: 366      cgccttggagcaggccaacggtgacctggaggtgaagatccgcgactggtaccagaagca 425
                |||| ||||| |||||||||  |||||||||||||||||||||||||||||||||| |||
Sbjct: 21326701 cgccctggaggaggccaacgccgacctggaggtgaagatccgcgactggtaccagaggca 21326760

                                                                       
Query: 426      ggggcccgggcctgcccgcgactacagccactacttcaagaccatcgaggacctg 480
                ||  || ||||| || | |||||||||||||||||||||||||||||||||||||
Sbjct: 21326761 ggccccagggcccgctcccgactacagccactacttcaagaccatcgaggacctg 21326815



 Score =  226 bits (114), Expect = 3e-56
 Identities = 173/192 (90%), Gaps = 3/192 (1%)
 Strand = Plus / Minus

                                                                            
Query: 301      ggcaacgagaagctcaccatgcagaacctcaacgaccgcctggcctcctacctggagaag 360
                |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21479447 ggcaacgagaagatcaccatgcagaacctcaacgaccgcctggcctcctacctggagaag 21479388

                                                                            
Query: 361      gtgcgcgccttggagcaggccaacggtgacctggaggtgaagatccgcgactggtaccag 420
                ||||||||| ||||| ||||||||  ||||||||||||||||||||| ||||||||||||
Sbjct: 21479387 gtgcgcgccctggaggaggccaacactgacctggaggtgaagatccgtgactggtaccag 21479328

                                                                            
Query: 421      aagcaggggcc---cgggcctgcccgcgactacagccactacttcaagaccatcgaggac 477
                |||||| | ||   | | || |  ||||||||||||| ||||||||||||||||||||| 
Sbjct: 21479327 aagcagagccccagcagcccggagcgcgactacagcccctacttcaagaccatcgaggag 21479268

                            
Query: 478      ctgcgggacaag 489
                || |||||||||
Sbjct: 21479267 ctccgggacaag 21479256



 Score =  208 bits (105), Expect = 6e-51
 Identities = 132/141 (93%)
 Strand = Plus / Minus

                                                                            
Query: 590      ccctgcgcctgagcgtggaggccgacatcaacggcctgcgcagggtgctggacgagctga 649
                ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21844461 ccctgcgccagagcgtggaggccgacatcaacggcctgcgcagggtgctggacgagctga 21844402

                                                                            
Query: 650      ccctggccaggactgacctggagctgcagatcgaaggcctgaaggaagagctggcctacc 709
                ||||| ||| ||| ||||||||| ||||||| ||| ||||||| || |||||||||||||
Sbjct: 21844401 ccctgaccaagaccgacctggagatgcagattgaaagcctgaatgaggagctggcctacc 21844342

                                     
Query: 710      tgaagaagaaccacgaggagg 730
                |||||||||||||||||||||
Sbjct: 21844341 tgaagaagaaccacgaggagg 21844321



 Score =  204 bits (103), Expect = 1e-49
 Identities = 172/195 (88%)
 Strand = Plus / Plus

                                                                            
Query: 295      ctggcgggcaacgagaagctcaccatgcagaacctcaacgaccgcctggcctcctacctg 354
                |||| ||||| ||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 21339791 ctggtgggcagcgagaaggtgaccatgcagaacctcaacgaccgcctggcctcctacctg 21339850

                                                                            
Query: 355      gagaaggtgcgcgccttggagcaggccaacggtgacctggaggtgaagatccgcgactgg 414
                || |||||||||||| ||||| |||||||||  |||||||||||||||||||||||||||
Sbjct: 21339851 gacaaggtgcgcgccctggaggaggccaacgccgacctggaggtgaagatccgcgactgg 21339910

                                                                            
Query: 415      taccagaagcaggggcccgggcctgcccgcgactacagccactacttcaagaccatcgag 474
                ||||||| |||| |||| |      ||   |||||||||| |||||||||||||||||||
Sbjct: 21339911 taccagaggcagcggccggctgagtccaaggactacagcccctacttcaagaccatcgag 21339970

                               
Query: 475      gacctgcgggacaag 489
                ||||||||| |||||
Sbjct: 21339971 gacctgcggaacaag 21339985



 Score =  194 bits (98), Expect = 9e-47
 Identities = 169/192 (88%), Gaps = 3/192 (1%)
 Strand = Plus / Minus

                                                                            
Query: 301      ggcaacgagaagctcaccatgcagaacctcaacgaccgcctggcctcctacctggagaag 360
                |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 21494024 ggcaacgagaagatcaccatgcagaacctcaacgaccgcctggcctcctacctggacaag 21493965

                                                                            
Query: 361      gtgcgcgccttggagcaggccaacggtgacctggaggtgaagatccgcgactggtaccag 420
                ||||||||| ||||| |||||||||  |||||||||||||||||||  ||||||||| ||
Sbjct: 21493964 gtgcgcgccctggaggaggccaacgccgacctggaggtgaagatccatgactggtacaag 21493905

                                                                            
Query: 421      aagcaggggcc---cgggcctgcccgcgactacagccactacttcaagaccatcgaggac 477
                |||||| | ||   | | || |  ||||||||||||| ||||||||||||||| ||||| 
Sbjct: 21493904 aagcagagccccagcagcccggagcgcgactacagcccctacttcaagaccatggaggag 21493845

                            
Query: 478      ctgcgggacaag 489
                || |||||||||
Sbjct: 21493844 ctccgggacaag 21493833



 Score =  190 bits (96), Expect = 1e-45
 Identities = 135/148 (91%)
 Strand = Plus / Minus

                                                                            
Query: 583      gagcaggccctgcgcctgagcgtggaggccgacatcaacggcctgcgcagggtgctggac 642
                |||| ||| ||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 21492854 gagctggcgctgcgccagggcgtggaggccgacatcaacggcctgcgcagggtgctggac 21492795

                                                                            
Query: 643      gagctgaccctggccaggactgacctggagctgcagatcgaaggcctgaaggaagagctg 702
                ||||||||| || ||| ||||||||||||| ||||||||||  ||||||| || ||||||
Sbjct: 21492794 gagctgaccttgaccaagactgacctggagatgcagatcgagagcctgaacgaggagctg 21492735

                                            
Query: 703      gcctacctgaagaagaaccacgaggagg 730
                |||||||||||||||||||| |||||||
Sbjct: 21492734 gcctacctgaagaagaaccatgaggagg 21492707



 Score =  184 bits (93), Expect = 9e-44
 Identities = 129/141 (91%)
 Strand = Plus / Minus

                                                                            
Query: 590      ccctgcgcctgagcgtggaggccgacatcaacggcctgcgcagggtgctggacgagctga 649
                ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 21477790 ccctgcgccagagcgtggaggccgacatcaacggcctgcgcagggtgctggatgagctga 21477731

                                                                            
Query: 650      ccctggccaggactgacctggagctgcagatcgaaggcctgaaggaagagctggcctacc 709
                || || ||| ||| ||||||||| ||||||||||  ||||||| || |||||||||| ||
Sbjct: 21477730 ccttgaccaagaccgacctggagatgcagatcgagagcctgaacgaggagctggccttcc 21477671

                                     
Query: 710      tgaagaagaaccacgaggagg 730
                |||||||||||||||||||||
Sbjct: 21477670 tgaagaagaaccacgaggagg 21477650



 Score =  167 bits (84), Expect = 2e-38
 Identities = 126/140 (90%)
 Strand = Plus / Plus

                                                                            
Query: 591      cctgcgcctgagcgtggaggccgacatcaacggcctgcgcagggtgctggacgagctgac 650
                ||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 21342011 cctgcgcatgagcgtggaggccgacatcaacgggctgcgcagggtgctggacgagctgac 21342070

                                                                            
Query: 651      cctggccaggactgacctggagctgcagatcgaaggcctgaaggaagagctggcctacct 710
                |||||||||  | ||||||||| ||||||||||  |||| ||||| ||||||||||||||
Sbjct: 21342071 cctggccagagccgacctggagatgcagatcgagagcctcaaggaggagctggcctacct 21342130

                                    
Query: 711      gaagaagaaccacgaggagg 730
                    ||||||||||||||||
Sbjct: 21342131 ccgaaagaaccacgaggagg 21342150



 Score =  165 bits (83), Expect = 8e-38
 Identities = 86/87 (98%)
 Strand = Plus / Plus

                                                                            
Query: 488      agattctcggtgccaccattgagaactccaagatagtcctgcagatcgacaatgcccgtc 547
                |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 21538664 agattctcggtgccaccattgagaactccaagatagtcctgcagatcgacaacgcccgtc 21538723

                                           
Query: 548      tggctgcagatgacttccgaaccaagt 574
                |||||||||||||||||||||||||||
Sbjct: 21538724 tggctgcagatgacttccgaaccaagt 21538750



 Score =  159 bits (80), Expect = 5e-36
 Identities = 125/140 (89%)
 Strand = Plus / Plus

                                                                            
Query: 591      cctgcgcctgagcgtggaggccgacatcaacggcctgcgcagggtgctggacgagctgac 650
                ||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 21320070 cctgcgcatgagcgtggaggccgacatcaacgggctgcgcagggtgctggacgagctgac 21320129

                                                                            
Query: 651      cctggccaggactgacctggagctgcagatcgaaggcctgaaggaagagctggcctacct 710
                |||||||||  | ||||||||| ||||||||||   ||| ||||| ||||||||||||||
Sbjct: 21320130 cctggccagagccgacctggagatgcagatcgagaacctcaaggaggagctggcctacct 21320189

                                    
Query: 711      gaagaagaaccacgaggagg 730
                    ||||||||||||||||
Sbjct: 21320190 ccgaaagaaccacgaggagg 21320209



 Score =  157 bits (79), Expect = 2e-35
 Identities = 127/143 (88%)
 Strand = Plus / Minus

                                                                            
Query: 588      ggccctgcgcctgagcgtggaggccgacatcaacggcctgcgcagggtgctggacgagct 647
                ||||||| ||| || ||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 21883754 ggccctgtgccagaacgtggaggccgacatcaacgggctgcgcagggtgctggacgagct 21883695

                                                                            
Query: 648      gaccctggccaggactgacctggagctgcagatcgaaggcctgaaggaagagctggccta 707
                |||||||| |||  | |||||||||   ||||||||   |||||| || |||||||||||
Sbjct: 21883694 gaccctggtcagagccgacctggagacccagatcgagaccctgaacgaggagctggccta 21883635

                                       
Query: 708      cctgaagaagaaccacgaggagg 730
                |||||||||||||||||||||||
Sbjct: 21883634 cctgaagaagaaccacgaggagg 21883612



 Score =  155 bits (78), Expect = 8e-35
 Identities = 138/158 (87%)
 Strand = Plus / Plus

                                                                            
Query: 573      gttcgagacagagcaggccctgcgcctgagcgtggaggccgacatcaacggcctgcgcag 632
                ||||||||| ||||||||||||||  |||||||||||||||||||||| || ||||||||
Sbjct: 21328325 gttcgagacggagcaggccctgcgtgtgagcgtggaggccgacatcaatgggctgcgcag 21328384

                                                                            
Query: 633      ggtgctggacgagctgaccctggccaggactgacctggagctgcagatcgaaggcctgaa 692
                ||||||||| |||||||||||||||||  | || |||||| ||||||||||   ||| ||
Sbjct: 21328385 ggtgctggatgagctgaccctggccagagccgatctggagatgcagatcgagaacctcaa 21328444

                                                      
Query: 693      ggaagagctggcctacctgaagaagaaccacgaggagg 730
                ||| ||||||||||||||    ||||||||||||||||
Sbjct: 21328445 ggaggagctggcctacctccgaaagaaccacgaggagg 21328482



 Score =  141 bits (71), Expect = 1e-30
 Identities = 89/95 (93%)
 Strand = Plus / Minus

                                                                            
Query: 1144     cagaaccaggagtaccagcatctcatggacatcaagacgcggctggagcaggagatcgcc 1203
                ||||||||||||||| ||   ||| |||||||||||||||||||||||||||||||||||
Sbjct: 21476905 cagaaccaggagtacaagatgctcctggacatcaagacgcggctggagcaggagatcgcc 21476846

                                                   
Query: 1204     acctaccgcaacctgctggagggccaggacgccaa 1238
                |||||||||| ||||||||||||||||||||||||
Sbjct: 21476845 acctaccgcagcctgctggagggccaggacgccaa 21476811



 Score =  139 bits (70), Expect = 5e-30
 Identities = 88/94 (93%)
 Strand = Plus / Minus

                                                                            
Query: 1144     cagaaccaggagtaccagcatctcatggacatcaagacgcggctggagcaggagatcgcc 1203
                ||||||||||||||| ||   ||| |||||||||||||||||||||||||||||||||||
Sbjct: 21491645 cagaaccaggagtacaagatgctcctggacatcaagacgcggctggagcaggagatcgcc 21491586

                                                  
Query: 1204     acctaccgcaacctgctggagggccaggacgcca 1237
                |||||||||| |||||||||||||||||||||||
Sbjct: 21491585 acctaccgcagcctgctggagggccaggacgcca 21491552



 Score =  121 bits (61), Expect = 1e-24
 Identities = 94/105 (89%)
 Strand = Plus / Minus

                                                                            
Query: 301      ggcaacgagaagctcaccatgcagaacctcaacgaccgcctggcctcctacctggagaag 360
                |||||||||||| | ||||||||||||||||| ||||||||||||||||||||||| || 
Sbjct: 21785280 ggcaacgagaaggtgaccatgcagaacctcaatgaccgcctggcctcctacctggacaac 21785221

                                                             
Query: 361      gtgcgcgccttggagcaggccaacggtgacctggaggtgaagatc 405
                ||||||||| ||||| |||||||||  |||||||||  |||||||
Sbjct: 21785220 gtgcgcgccctggaggaggccaacgccgacctggagcagaagatc 21785176



 Score =  121 bits (61), Expect = 1e-24
 Identities = 94/105 (89%)
 Strand = Plus / Minus

                                                                            
Query: 301      ggcaacgagaagctcaccatgcagaacctcaacgaccgcctggcctcctacctggagaag 360
                |||||||||||| | ||||||||||||||||| ||||||||||||||||||||||| || 
Sbjct: 21811601 ggcaacgagaaggtgaccatgcagaacctcaatgaccgcctggcctcctacctggacaac 21811542

                                                             
Query: 361      gtgcgcgccttggagcaggccaacggtgacctggaggtgaagatc 405
                ||||||||| ||||| |||||||||  |||||||||  |||||||
Sbjct: 21811541 gtgcgcgccctggaggaggccaacgccgacctggagcagaagatc 21811497



 Score =  107 bits (54), Expect = 2e-20
 Identities = 66/70 (94%)
 Strand = Plus / Minus

                                                                            
Query: 316      accatgcagaacctcaacgaccgcctggcctcctacctggagaaggtgcgcgccttggag 375
                ||||||| ||||||||||||||||||||||||||||||||| |||||||||||| |||||
Sbjct: 21958899 accatgcggaacctcaacgaccgcctggcctcctacctggacaaggtgcgcgccctggag 21958840

                          
Query: 376      caggccaacg 385
                 |||||||||
Sbjct: 21958839 gaggccaacg 21958830



 Score = 93.7 bits (47), Expect = 2e-16
 Identities = 83/95 (87%)
 Strand = Plus / Plus

                                                                            
Query: 1138     gagcggcagaaccaggagtaccagcatctcatggacatcaagacgcggctggagcaggag 1197
                ||||| |||||||| |||||||||   ||  ||||| | |||||||||||||||||||||
Sbjct: 21322452 gagcgccagaaccacgagtaccaggtgctgctggacgtgaagacgcggctggagcaggag 21322511

                                                   
Query: 1198     atcgccacctaccgcaacctgctggagggccagga 1232
                |||||||||||||||  ||||||||||||| ||||
Sbjct: 21322512 atcgccacctaccgccgcctgctggagggcgagga 21322546



 Score = 93.7 bits (47), Expect = 2e-16
 Identities = 65/71 (91%)
 Strand = Plus / Minus

                                                                            
Query: 660      gactgacctggagctgcagatcgaaggcctgaaggaagagctggcctacctgaagaagaa 719
                ||||||||||||| ||||||||||  ||||||| || |||||||||||||||||||||||
Sbjct: 21444553 gactgacctggagatgcagatcgagagcctgaacgaggagctggcctacctgaagaagaa 21444494

                           
Query: 720      ccacgaggagg 730
                ||| |||||||
Sbjct: 21444493 ccatgaggagg 21444483



 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 53/56 (94%)
 Strand = Plus / Plus

                                                                        
Query: 1177     aagacgcggctggagcaggagatcgccacctaccgcaacctgctggagggccagga 1232
                ||||||||||||||||||||||||||||||||||||  ||||||||||||| ||||
Sbjct: 21330244 aagacgcggctggagcaggagatcgccacctaccgccgcctgctggagggcgagga 21330299



 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 53/56 (94%)
 Strand = Plus / Plus

                                                                        
Query: 1177     aagacgcggctggagcaggagatcgccacctaccgcaacctgctggagggccagga 1232
                ||||||||||||||||||||||||||||||||||||  ||||||||||||| ||||
Sbjct: 21342936 aagacgcggctggagcaggagatcgccacctaccgccgcctgctggagggcgagga 21342991



 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 53/56 (94%)
 Strand = Plus / Plus

                                                                        
Query: 1177     aagacgcggctggagcaggagatcgccacctaccgcaacctgctggagggccagga 1232
                ||||||||||||||||||||||||||||||||||||  ||||||||||||| ||||
Sbjct: 21499744 aagacgcggctggagcaggagatcgccacctaccgccgcctgctggagggcgagga 21499799



 Score = 81.8 bits (41), Expect = 9e-13
 Identities = 68/77 (88%)
 Strand = Plus / Minus

                                                                            
Query: 316      accatgcagaacctcaacgaccgcctggcctcctacctggagaaggtgcgcgccttggag 375
                ||||||||||||||||| |||||||||||||||||||||||  | ||||| ||  |||||
Sbjct: 21799553 accatgcagaacctcaatgaccgcctggcctcctacctggaccatgtgcgtgctctggag 21799494

                                 
Query: 376      caggccaacggtgacct 392
                 ||||||||| ||||||
Sbjct: 21799493 gaggccaacgctgacct 21799477



 Score = 77.8 bits (39), Expect = 1e-11
 Identities = 69/79 (87%)
 Strand = Plus / Minus

                                                                            
Query: 937      cagatcagcaagacggaggtcaccgatctgcggcgcaccctccagggtctggagatcgag 996
                |||| ||||||||||||| |||| || ||  |||| || |||||||| ||||||||||||
Sbjct: 21477208 cagaccagcaagacggagatcacggagctcaggcgaacactccagggcctggagatcgag 21477149

                                   
Query: 997      ctgcagtctcagctcagca 1015
                |||||||| ||||||||||
Sbjct: 21477148 ctgcagtcccagctcagca 21477130



 Score = 73.8 bits (37), Expect = 2e-10
 Identities = 46/49 (93%)
 Strand = Plus / Minus

                                                                 
Query: 1184     ggctggagcaggagatcgccacctaccgcaacctgctggagggccagga 1232
                |||||||||||||||||||||||||||||  ||||||||||||| ||||
Sbjct: 21256681 ggctggagcaggagatcgccacctaccgccgcctgctggagggcgagga 21256633



 Score = 73.8 bits (37), Expect = 2e-10
 Identities = 106/129 (82%)
 Strand = Plus / Minus

                                                                            
Query: 602      gcgtggaggccgacatcaacggcctgcgcagggtgctggacgagctgaccctggccagga 661
                ||||||| || ||||||| ||| |||||| |||||||||||||||||||||||  |||||
Sbjct: 21810030 gcgtggacgcggacatcagcggtctgcgccgggtgctggacgagctgaccctgtgcagga 21809971

                                                                            
Query: 662      ctgacctggagctgcagatcgaaggcctgaaggaagagctggcctacctgaagaagaacc 721
                | ||| | ||| | ||| | ||   |||||  || |||||||| ||||| |||||||| |
Sbjct: 21809970 ccgacttagagattcagctggagaccctgagcgaggagctggcttacctcaagaagaatc 21809911

                         
Query: 722      acgaggagg 730
                |||||||||
Sbjct: 21809910 acgaggagg 21809902



 Score = 73.8 bits (37), Expect = 2e-10
 Identities = 70/81 (86%)
 Strand = Plus / Minus

                                                                            
Query: 316      accatgcagaacctcaacgaccgcctggcctcctacctggagaaggtgcgcgccttggag 375
                ||||||||||||||||| ||||||||||||   ||||| || |||||  | |||||||||
Sbjct: 22060713 accatgcagaacctcaatgaccgcctggccaattacctagacaaggtcagggccttggag 22060654

                                     
Query: 376      caggccaacggtgacctggag 396
                 ||||||||| ||||||||||
Sbjct: 22060653 gaggccaacgctgacctggag 22060633



 Score = 69.9 bits (35), Expect = 4e-09
 Identities = 107/131 (81%)
 Strand = Plus / Minus

                                                                            
Query: 600      gagcgtggaggccgacatcaacggcctgcgcagggtgctggacgagctgaccctggccag 659
                ||||||||| |||||||||||||||||||| |  || ||||||||  ||||| || |  |
Sbjct: 22059210 gagcgtggaagccgacatcaacggcctgcggaaagtcctggacgacttgaccatgactcg 22059151

                                                                            
Query: 660      gactgacctggagctgcagatcgaaggcctgaaggaagagctggcctacctgaagaagaa 719
                  | ||||| ||| ||||||| ||   ||||  ||| |||||| ||||||||||||||||
Sbjct: 22059150 ctcggacctcgagatgcagatggagaacctggtggaggagctgacctacctgaagaagaa 22059091

                           
Query: 720      ccacgaggagg 730
                |||||||||||
Sbjct: 22059090 ccacgaggagg 22059080



 Score = 65.9 bits (33), Expect = 6e-08
 Identities = 45/49 (91%)
 Strand = Plus / Plus

                                                                 
Query: 526      ctgcagatcgacaatgcccgtctggctgcagatgacttccgaaccaagt 574
                |||||||||||||||||||| ||||| || ||||||||||| |||||||
Sbjct: 21341380 ctgcagatcgacaatgcccgcctggccgctgatgacttccgcaccaagt 21341428



 Score = 65.9 bits (33), Expect = 6e-08
 Identities = 60/69 (86%)
 Strand = Plus / Minus

                                                                            
Query: 604      gtggaggccgacatcaacggcctgcgcagggtgctggacgagctgaccctggccaggact 663
                |||||| | |||||||| |||||||||||| | ||||||||||||||||||  || | ||
Sbjct: 21407848 gtggagtcagacatcaatggcctgcgcaggatcctggacgagctgaccctgtgcaaggct 21407789

                         
Query: 664      gacctggag 672
                |||||||||
Sbjct: 21407788 gacctggag 21407780



 Score = 61.9 bits (31), Expect = 9e-07
 Identities = 46/51 (90%)
 Strand = Plus / Plus

                                                                   
Query: 967      cggcgcaccctccagggtctggagatcgagctgcagtctcagctcagcatg 1017
                ||||||||| | ||||  |||||||||||||||||||| ||||||||||||
Sbjct: 21329939 cggcgcaccatgcaggcgctggagatcgagctgcagtcccagctcagcatg 21329989



 Score = 61.9 bits (31), Expect = 9e-07
 Identities = 103/127 (81%)
 Strand = Plus / Minus

                                                                            
Query: 604      gtggaggccgacatcaacggcctgcgcagggtgctggacgagctgaccctggccaggact 663
                |||||||| || | ||||||||||||| || | |||||||||||||| |||  || | ||
Sbjct: 21439706 gtggaggctgataccaacggcctgcgccggatcctggacgagctgacgctgtgcaaggct 21439647

                                                                            
Query: 664      gacctggagctgcagatcgaaggcctgaaggaagagctggcctacctgaagaagaaccac 723
                ||||||||| ||||| | ||   |||||| || ||||||   | ||| ||||||||||||
Sbjct: 21439646 gacctggagatgcaggtggagtccctgaaagaggagctgatgtgcctcaagaagaaccac 21439587

                       
Query: 724      gaggagg 730
                |||||||
Sbjct: 21439586 gaggagg 21439580



 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 48/54 (88%)
 Strand = Plus / Minus

                                                                      
Query: 619      aacggcctgcgcagggtgctggacgagctgaccctggccaggactgacctggag 672
                ||||||||||||||| | ||||||||||||||||||  || | |||||||||||
Sbjct: 21366209 aacggcctgcgcaggatcctggacgagctgaccctgtgcaaggctgacctggag 21366156



 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 57/66 (86%)
 Strand = Plus / Minus

                                                                            
Query: 301      ggcaacgagaagctcaccatgcagaacctcaacgaccgcctggcctcctacctggagaag 360
                ||||||||||||   |||||||||  ||| |||||||| ||||||  |||||||||||||
Sbjct: 21462897 ggcaacgagaaggagaccatgcagttcctgaacgaccggctggccaactacctggagaag 21462838

                      
Query: 361      gtgcgc 366
                ||||||
Sbjct: 21462837 gtgcgc 21462832



 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 66/78 (84%)
 Strand = Plus / Minus

                                                                            
Query: 319      atgcagaacctcaacgaccgcctggcctcctacctggagaaggtgcgcgccttggagcag 378
                |||||||| ||||| ||||||||||| ||||||||||| || ||||| ||  ||||| ||
Sbjct: 21829560 atgcagaatctcaatgaccgcctggcatcctacctggataacgtgcgagctctggaggag 21829501

                                  
Query: 379      gccaacggtgacctggag 396
                || || | ||||||||||
Sbjct: 21829500 gcaaatgctgacctggag 21829483


>Sscrofa_Chr05 
||          Length = 111506441

 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 44/48 (91%)
 Strand = Plus / Plus

                                                                
Query: 316      accatgcagaacctcaacgaccgcctggcctcctacctggagaaggtg 363
                ||||||||| |||| || ||||||||||||||||||||||||| ||||
Sbjct: 18726338 accatgcaggacctgaatgaccgcctggcctcctacctggagagggtg 18726385



 Score = 61.9 bits (31), Expect = 9e-07
 Identities = 37/39 (94%)
 Strand = Plus / Minus

                                                       
Query: 1194     ggagatcgccacctaccgcaacctgctggagggccagga 1232
                ||||||||||||||||||||| |||||||||||| ||||
Sbjct: 18409741 ggagatcgccacctaccgcaagctgctggagggcgagga 18409703



 Score = 61.9 bits (31), Expect = 9e-07
 Identities = 37/39 (94%)
 Strand = Plus / Minus

                                                       
Query: 1194     ggagatcgccacctaccgcaacctgctggagggccagga 1232
                ||||||||||||||||||||| |||||||||||| ||||
Sbjct: 18523706 ggagatcgccacctaccgcaagctgctggagggcgagga 18523668



 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 36/38 (94%)
 Strand = Plus / Plus

                                                      
Query: 1195     gagatcgccacctaccgcaacctgctggagggccagga 1232
                |||||||||||||||||||| |||||||||||| ||||
Sbjct: 18157386 gagatcgccacctaccgcaagctgctggagggcgagga 18157423



 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                      
Query: 1195     gagatcgccacctaccgcaacctgctggagggccagga 1232
                |||||||||||||||||||| |||||||||||| ||||
Sbjct: 18263433 gagatcgccacctaccgcaagctgctggagggcgagga 18263396



 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                      
Query: 1195     gagatcgccacctaccgcaacctgctggagggccagga 1232
                |||||||||||||||||||| |||||||||||| ||||
Sbjct: 18442928 gagatcgccacctaccgcaagctgctggagggcgagga 18442891



 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                      
Query: 1195     gagatcgccacctaccgcaacctgctggagggccagga 1232
                |||||||||||||||||||| |||||||||||| ||||
Sbjct: 18586283 gagatcgccacctaccgcaagctgctggagggcgagga 18586246


  Database: Sscrofa_10.2.fasta
    Posted date:  Nov 16, 2011 10:34 AM
  Number of letters in database: 2,808,509,378
  Number of sequences in database:  4582
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 28,645,693
Number of extensions: 269
Number of successful extensions: 269
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 268
Number of HSP's successfully gapped: 53
Length of query: 1415
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 1394
Effective length of database: 2,808,413,156
Effective search space: 3914927939464
Effective search space used: 3914927939464
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)