Animal-Genome cDNA 20110601C-001864

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-001864
         (1096 letters)

Database: RefSeq49_BP.fasta 
           33,088 sequences; 17,681,374 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001015600.1| keratin, type I cytoskeletal 19 [Bos taurus].     462   e-130
Alignment   gi|NP_001098792.1| keratin, type I cytoskeletal 17 [Bos taurus].     378   e-105
Alignment   gi|NP_001160047.1| keratin, type I cytoskeletal 14 [Bos taurus].     374   e-103
Alignment   gi|NP_001124219.1| keratin, type I cytoskeletal 13 [Bos taurus].     373   e-103
Alignment   gi|XP_002696036.1| PREDICTED: keratin 13-like [Bos taurus].          354   7e-98
Alignment   gi|XP_002702249.1| PREDICTED: keratin 13-like [Bos taurus].          354   7e-98
Alignment   gi|XP_002696056.1| PREDICTED: keratin 12-like [Bos taurus].          332   4e-91
Alignment   gi|XP_001255462.1| PREDICTED: keratin 12-like [Bos taurus].          332   4e-91
Alignment   gi|XP_001788780.1| PREDICTED: keratin 13-like isoform 2 [Bos ta...   317   2e-86
Alignment   gi|NP_776802.1| keratin, type I cytoskeletal 10 [Bos taurus].        315   3e-86

>ref|NP_001015600.1| keratin, type I cytoskeletal 19 [Bos taurus].
          Length = 399

 Score =  462 bits (1189), Expect = e-130
 Identities = 239/261 (91%), Positives = 247/261 (94%)
 Frame = +2

Query: 314  NEKLTMQNLNDRLASYLEKVRALEQANGDLEVKIRDWYQKQGPGPARDYSHYFKTIEDLR 493
            NEKLTMQNLNDRLASYLEKVRALE+ANGDLEVKIRDWYQKQGPGPARDYSHYFKTIEDLR
Sbjct: 78   NEKLTMQNLNDRLASYLEKVRALEEANGDLEVKIRDWYQKQGPGPARDYSHYFKTIEDLR 137

Query: 494  DKILGATIENSKIVLQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVLDELTLART 673
            D+ILGATIENSKIVLQIDNARLAADDFRTKFETEQALR+SVEADINGLRRVLDELTLART
Sbjct: 138  DQILGATIENSKIVLQIDNARLAADDFRTKFETEQALRMSVEADINGLRRVLDELTLART 197

Query: 674  DLELQIEGLKEELAYLKKNHEEEISALKGQVGGQVSVEVDSAPGIDLAKILSDMRSQYEV 853
            DLE+QIEGLKEELAYLKKNHEEE+S LKGQVGGQVSVEVDSAPGIDLAKILSDMRSQYEV
Sbjct: 198  DLEMQIEGLKEELAYLKKNHEEEMSVLKGQVGGQVSVEVDSAPGIDLAKILSDMRSQYEV 257

Query: 854  MAEQNRKDAEAWFTSRTEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIELQSQLSMKX 1033
            +AE+NRKDAEAWF S+TEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIELQSQLSMK 
Sbjct: 258  IAEKNRKDAEAWFISQTEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIELQSQLSMKA 317

Query: 1034 XXXXXXXXXXXRFGAQLAQIQ 1096
                       RFGAQLAQIQ
Sbjct: 318  ALEGTLAETEARFGAQLAQIQ 338


>ref|NP_001098792.1| keratin, type I cytoskeletal 17 [Bos taurus].
          Length = 441

 Score =  378 bits (970), Expect = e-105
 Identities = 190/260 (73%), Positives = 226/260 (86%)
 Frame = +2

Query: 317  EKLTMQNLNDRLASYLEKVRALEQANGDLEVKIRDWYQKQGPGPARDYSHYFKTIEDLRD 496
            EK TMQNLNDRLASYL+KVRALE+AN +LE+KIRDWYQKQ PGPA DYS YFKTIEDLR+
Sbjct: 92   EKATMQNLNDRLASYLDKVRALEEANTELELKIRDWYQKQAPGPAPDYSSYFKTIEDLRN 151

Query: 497  KILGATIENSKIVLQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVLDELTLARTD 676
            KI  AT++N+ ++LQIDNARLAADDFRTKFETEQALR+SVEADINGLRRVLDELTLAR D
Sbjct: 152  KIHTATVDNANLLLQIDNARLAADDFRTKFETEQALRVSVEADINGLRRVLDELTLARAD 211

Query: 677  LELQIEGLKEELAYLKKNHEEEISALKGQVGGQVSVEVDSAPGIDLAKILSDMRSQYEVM 856
            LE+QIE LKEELAYL+KNHEEE+ AL+GQVGG+++VE+D+APG+DL++IL++MR QYE M
Sbjct: 212  LEMQIENLKEELAYLRKNHEEEMKALRGQVGGEINVEMDAAPGVDLSRILNEMRDQYEKM 271

Query: 857  AEQNRKDAEAWFTSRTEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIELQSQLSMKXX 1036
            AE+NRKDAE WF S+TEELNREVA ++E +Q  K+E+++LRRTLQ LEIELQSQLSMK  
Sbjct: 272  AEKNRKDAEDWFFSKTEELNREVATNSELVQSGKSEISELRRTLQALEIELQSQLSMKAS 331

Query: 1037 XXXXXXXXXXRFGAQLAQIQ 1096
                      R+  QL+QIQ
Sbjct: 332  LEGSLAETENRYCMQLSQIQ 351


>ref|NP_001160047.1| keratin, type I cytoskeletal 14 [Bos taurus].
          Length = 477

 Score =  374 bits (959), Expect = e-103
 Identities = 189/261 (72%), Positives = 225/261 (86%)
 Frame = +2

Query: 314  NEKLTMQNLNDRLASYLEKVRALEQANGDLEVKIRDWYQKQGPGPARDYSHYFKTIEDLR 493
            +EK+TMQNLNDRLASYL+KVRALE+AN DLEVKIRDWYQ+Q P   +DYS YFKTIEDLR
Sbjct: 120  SEKVTMQNLNDRLASYLDKVRALEEANADLEVKIRDWYQRQRPAEIKDYSPYFKTIEDLR 179

Query: 494  DKILGATIENSKIVLQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVLDELTLART 673
            +KIL AT++N+ +VLQIDNARLAADDFRTK+ETE  LRLSVEADINGLRRVLDELTLAR 
Sbjct: 180  NKILTATVDNANVVLQIDNARLAADDFRTKYETELNLRLSVEADINGLRRVLDELTLARA 239

Query: 674  DLELQIEGLKEELAYLKKNHEEEISALKGQVGGQVSVEVDSAPGIDLAKILSDMRSQYEV 853
            DLE+QIE LKEELAYL+KNHEEE+++L+GQVGG V+VE+D+APG+DL++IL++MR QYE 
Sbjct: 240  DLEMQIESLKEELAYLRKNHEEEMNSLRGQVGGDVNVEMDAAPGVDLSRILNEMRDQYEK 299

Query: 854  MAEQNRKDAEAWFTSRTEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIELQSQLSMKX 1033
            MAE+NRKDAE WF S+TEELNREVA ++E +Q  K+E+++LRRTLQ LEIELQSQLSMK 
Sbjct: 300  MAEKNRKDAEDWFFSKTEELNREVATNSELVQSGKSEISELRRTLQNLEIELQSQLSMKA 359

Query: 1034 XXXXXXXXXXXRFGAQLAQIQ 1096
                       R+  QLAQIQ
Sbjct: 360  SLENSLEETKGRYCMQLAQIQ 380


>ref|NP_001124219.1| keratin, type I cytoskeletal 13 [Bos taurus].
          Length = 453

 Score =  373 bits (958), Expect = e-103
 Identities = 188/262 (71%), Positives = 218/262 (83%), Gaps = 1/262 (0%)
 Frame = +2

Query: 314  NEKLTMQNLNDRLASYLEKVRALEQANGDLEVKIRDWYQKQGP-GPARDYSHYFKTIEDL 490
            NEK+TMQNLNDRLASYLEKVRALE+AN DLEVKIRDWYQ+Q P  P RDYS YFKTI++L
Sbjct: 102  NEKITMQNLNDRLASYLEKVRALEEANADLEVKIRDWYQRQSPTSPERDYSPYFKTIDEL 161

Query: 491  RDKILGATIENSKIVLQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVLDELTLAR 670
            RDKIL A I+NS+++L+IDNARLAADDFR K E E ALR SVEADINGLRRVLDELTL +
Sbjct: 162  RDKILAAAIKNSQVILEIDNARLAADDFRLKHENEMALRQSVEADINGLRRVLDELTLTK 221

Query: 671  TDLELQIEGLKEELAYLKKNHEEEISALKGQVGGQVSVEVDSAPGIDLAKILSDMRSQYE 850
            TDLE+QIE L EELAYLKKNHEEE+     Q+ GQV+VE+D+AP +DL ++LS+MR QYE
Sbjct: 222  TDLEMQIESLNEELAYLKKNHEEEMKEFSNQLAGQVNVEMDAAPAVDLTRVLSEMREQYE 281

Query: 851  VMAEQNRKDAEAWFTSRTEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIELQSQLSMK 1030
             MAE+NR+DAEAWF S+TEELN+EVA +TE +Q SKTE+TDLRRT+QGLEIELQSQLSMK
Sbjct: 282  AMAEKNRRDAEAWFFSKTEELNKEVASNTEMIQTSKTEITDLRRTIQGLEIELQSQLSMK 341

Query: 1031 XXXXXXXXXXXXRFGAQLAQIQ 1096
                        R+ AQL QIQ
Sbjct: 342  AGLESTLAETECRYAAQLQQIQ 363


>ref|XP_002696036.1| PREDICTED: keratin 13-like [Bos taurus].
          Length = 434

 Score =  354 bits (909), Expect = 7e-98
 Identities = 181/262 (69%), Positives = 212/262 (80%), Gaps = 1/262 (0%)
 Frame = +2

Query: 314  NEKLTMQNLNDRLASYLEKVRALEQANGDLEVKIRDWYQKQGP-GPARDYSHYFKTIEDL 490
            NEK+TMQNLNDRLASYLEKVRALE+AN DLEVKIRDW+ KQ P  P RDYS YFKTI++L
Sbjct: 99   NEKITMQNLNDRLASYLEKVRALEEANADLEVKIRDWHLKQTPTSPERDYSPYFKTIDEL 158

Query: 491  RDKILGATIENSKIVLQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVLDELTLAR 670
            RDKIL ATI+N++I+L+IDNARLAADDFR K+E E  LR SVEADINGLRRVLDELTL +
Sbjct: 159  RDKILAATIDNNRIILEIDNARLAADDFRLKYENELTLRQSVEADINGLRRVLDELTLTK 218

Query: 671  TDLELQIEGLKEELAYLKKNHEEEISALKGQVGGQVSVEVDSAPGIDLAKILSDMRSQYE 850
            TDLE+QIE L EELAYLKKNHEEE+     Q+ GQV+VE+D+ PGIDL ++L++MR QYE
Sbjct: 219  TDLEMQIESLNEELAYLKKNHEEEMKEFSKQMVGQVNVEMDATPGIDLTRVLAEMREQYE 278

Query: 851  VMAEQNRKDAEAWFTSRTEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIELQSQLSMK 1030
             MAE+NR+DAE WF S++ ELN+EV   T  +Q SKTE+T+LRRTLQGLEIELQSQLSMK
Sbjct: 279  AMAEKNRRDAEEWFHSKSAELNKEVTSSTALIQTSKTEITELRRTLQGLEIELQSQLSMK 338

Query: 1031 XXXXXXXXXXXXRFGAQLAQIQ 1096
                        R+  QL QIQ
Sbjct: 339  AGLESTLAETECRYALQLQQIQ 360


>ref|XP_002702249.1| PREDICTED: keratin 13-like [Bos taurus].
          Length = 434

 Score =  354 bits (909), Expect = 7e-98
 Identities = 181/262 (69%), Positives = 212/262 (80%), Gaps = 1/262 (0%)
 Frame = +2

Query: 314  NEKLTMQNLNDRLASYLEKVRALEQANGDLEVKIRDWYQKQGP-GPARDYSHYFKTIEDL 490
            NEK+TMQNLNDRLASYLEKVRALE+AN DLEVKIRDW+ KQ P  P RDYS YFKTI++L
Sbjct: 99   NEKITMQNLNDRLASYLEKVRALEEANADLEVKIRDWHLKQTPTSPERDYSPYFKTIDEL 158

Query: 491  RDKILGATIENSKIVLQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVLDELTLAR 670
            RDKIL ATI+N++I+L+IDNARLAADDFR K+E E  LR SVEADINGLRRVLDELTL +
Sbjct: 159  RDKILAATIDNNRIILEIDNARLAADDFRLKYENELTLRQSVEADINGLRRVLDELTLTK 218

Query: 671  TDLELQIEGLKEELAYLKKNHEEEISALKGQVGGQVSVEVDSAPGIDLAKILSDMRSQYE 850
            TDLE+QIE L EELAYLKKNHEEE+     Q+ GQV+VE+D+ PGIDL ++L++MR QYE
Sbjct: 219  TDLEMQIESLNEELAYLKKNHEEEMKEFSKQMVGQVNVEMDATPGIDLTRVLAEMREQYE 278

Query: 851  VMAEQNRKDAEAWFTSRTEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIELQSQLSMK 1030
             MAE+NR+DAE WF S++ ELN+EV   T  +Q SKTE+T+LRRTLQGLEIELQSQLSMK
Sbjct: 279  AMAEKNRRDAEEWFHSKSAELNKEVTSSTALIQTSKTEITELRRTLQGLEIELQSQLSMK 338

Query: 1031 XXXXXXXXXXXXRFGAQLAQIQ 1096
                        R+  QL QIQ
Sbjct: 339  AGLESTLAETECRYALQLQQIQ 360


>ref|XP_002696056.1| PREDICTED: keratin 12-like [Bos taurus].
          Length = 532

 Score =  332 bits (851), Expect = 4e-91
 Identities = 171/266 (64%), Positives = 209/266 (78%), Gaps = 5/266 (1%)
 Frame = +2

Query: 314  NEKLTMQNLNDRLASYLEKVRALEQANGDLEVKIRDWYQKQG-----PGPARDYSHYFKT 478
            +EK TM+NLNDRLASYL+KVRALE+AN DLE KIR+WY+ +G     PG   DYS Y+  
Sbjct: 161  SEKETMKNLNDRLASYLDKVRALEEANTDLETKIREWYETRGSGTGDPGSQNDYSKYYPL 220

Query: 479  IEDLRDKILGATIENSKIVLQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVLDEL 658
            IEDLR+KI+ A IEN++++LQIDNARLAADDFR K+E E AL  +VEADINGLRRVLDEL
Sbjct: 221  IEDLRNKIISANIENAQLILQIDNARLAADDFRMKYENELALCQNVEADINGLRRVLDEL 280

Query: 659  TLARTDLELQIEGLKEELAYLKKNHEEEISALKGQVGGQVSVEVDSAPGIDLAKILSDMR 838
            TLAR DLE QIE L EELAYLKKNHEEE+ + +    GQVSVE+D+APG+DL ++L+DMR
Sbjct: 281  TLARADLETQIETLNEELAYLKKNHEEELQSCRAGGPGQVSVEMDAAPGVDLTRLLNDMR 340

Query: 839  SQYEVMAEQNRKDAEAWFTSRTEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIELQSQ 1018
            +QYE +AEQNRKDAEAWF  ++ EL +E++ +TEQLQ SK+EVTDLRR LQ LEIELQSQ
Sbjct: 341  AQYETIAEQNRKDAEAWFIEKSGELRKEISSNTEQLQSSKSEVTDLRRALQNLEIELQSQ 400

Query: 1019 LSMKXXXXXXXXXXXXRFGAQLAQIQ 1096
            L+MK             +  QL+Q+Q
Sbjct: 401  LAMKKSLEDSLAETEGDYCGQLSQVQ 426


>ref|XP_001255462.1| PREDICTED: keratin 12-like [Bos taurus].
          Length = 532

 Score =  332 bits (851), Expect = 4e-91
 Identities = 171/266 (64%), Positives = 209/266 (78%), Gaps = 5/266 (1%)
 Frame = +2

Query: 314  NEKLTMQNLNDRLASYLEKVRALEQANGDLEVKIRDWYQKQG-----PGPARDYSHYFKT 478
            +EK TM+NLNDRLASYL+KVRALE+AN DLE KIR+WY+ +G     PG   DYS Y+  
Sbjct: 161  SEKETMKNLNDRLASYLDKVRALEEANTDLETKIREWYETRGSGTGDPGSQNDYSKYYPL 220

Query: 479  IEDLRDKILGATIENSKIVLQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVLDEL 658
            IEDLR+KI+ A IEN++++LQIDNARLAADDFR K+E E AL  +VEADINGLRRVLDEL
Sbjct: 221  IEDLRNKIISANIENAQLILQIDNARLAADDFRMKYENELALCQNVEADINGLRRVLDEL 280

Query: 659  TLARTDLELQIEGLKEELAYLKKNHEEEISALKGQVGGQVSVEVDSAPGIDLAKILSDMR 838
            TLAR DLE QIE L EELAYLKKNHEEE+ + +    GQVSVE+D+APG+DL ++L+DMR
Sbjct: 281  TLARADLETQIETLNEELAYLKKNHEEELQSCRAGGPGQVSVEMDAAPGVDLTRLLNDMR 340

Query: 839  SQYEVMAEQNRKDAEAWFTSRTEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIELQSQ 1018
            +QYE +AEQNRKDAEAWF  ++ EL +E++ +TEQLQ SK+EVTDLRR LQ LEIELQSQ
Sbjct: 341  AQYETIAEQNRKDAEAWFIEKSGELRKEISSNTEQLQSSKSEVTDLRRALQNLEIELQSQ 400

Query: 1019 LSMKXXXXXXXXXXXXRFGAQLAQIQ 1096
            L+MK             +  QL+Q+Q
Sbjct: 401  LAMKKSLEDSLAETEGDYCGQLSQVQ 426


>ref|XP_001788780.1| PREDICTED: keratin 13-like isoform 2 [Bos taurus].
          Length = 566

 Score =  317 bits (811), Expect = 2e-86
 Identities = 158/264 (59%), Positives = 208/264 (78%), Gaps = 3/264 (1%)
 Frame = +2

Query: 314  NEKLTMQNLNDRLASYLEKVRALEQANGDLEVKIRDWYQKQGPG---PARDYSHYFKTIE 484
            NEK+TMQNLNDRLASYL+KVRALE++N +LEVKI++WY+K G       RDYS Y++TI+
Sbjct: 126  NEKITMQNLNDRLASYLDKVRALEESNYELEVKIKEWYEKYGNSRQREPRDYSKYYQTID 185

Query: 485  DLRDKILGATIENSKIVLQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVLDELTL 664
            DL+++I   T +N+ I++Q+DNARLAADDFR K+E E  LR SVEADINGLRRVLDELTL
Sbjct: 186  DLKNQIFNLTTDNANILIQVDNARLAADDFRLKYENEVTLRQSVEADINGLRRVLDELTL 245

Query: 665  ARTDLELQIEGLKEELAYLKKNHEEEISALKGQVGGQVSVEVDSAPGIDLAKILSDMRSQ 844
             +TDLE+QIE L EELAYLKKNHEEE+  L+    G V+VE+++APG+DL ++L++MRSQ
Sbjct: 246  TKTDLEMQIESLTEELAYLKKNHEEEMRDLQNVSTGDVNVEMNAAPGVDLTELLNNMRSQ 305

Query: 845  YEVMAEQNRKDAEAWFTSRTEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIELQSQLS 1024
            YE +AE+NR+DAEAWF  +++EL  E+  + EQ+   K+E+T+LRRT+QGLEIELQSQL+
Sbjct: 306  YEQLAEKNRRDAEAWFNEKSKELTTEINSNLEQVSSHKSEITELRRTIQGLEIELQSQLA 365

Query: 1025 MKXXXXXXXXXXXXRFGAQLAQIQ 1096
            +K            R+  QL+QIQ
Sbjct: 366  LKQSLEASLAETEGRYCVQLSQIQ 389


>ref|NP_776802.1| keratin, type I cytoskeletal 10 [Bos taurus].
          Length = 526

 Score =  315 bits (808), Expect = 3e-86
 Identities = 157/264 (59%), Positives = 208/264 (78%), Gaps = 3/264 (1%)
 Frame = +2

Query: 314  NEKLTMQNLNDRLASYLEKVRALEQANGDLEVKIRDWYQKQGPG---PARDYSHYFKTIE 484
            N+K+TMQNLNDRLASYL+KVRALE++N +LEVKI++WY+K G       RDYS Y++TI+
Sbjct: 126  NQKITMQNLNDRLASYLDKVRALEESNYELEVKIKEWYEKYGNSRQREPRDYSKYYQTID 185

Query: 485  DLRDKILGATIENSKIVLQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVLDELTL 664
            DL+++I   T +N+ I++Q+DNARLAADDFR K+E E  LR SVEADINGLRRVLDELTL
Sbjct: 186  DLKNQIFNLTTDNANILIQVDNARLAADDFRLKYENEVTLRQSVEADINGLRRVLDELTL 245

Query: 665  ARTDLELQIEGLKEELAYLKKNHEEEISALKGQVGGQVSVEVDSAPGIDLAKILSDMRSQ 844
             +TDLE+QIE L EELAYLKKNHEEE+  L+    G V+VE+++APG+DL ++L++MRSQ
Sbjct: 246  TKTDLEMQIESLTEELAYLKKNHEEEMRDLQNVSTGDVNVEMNAAPGVDLTELLNNMRSQ 305

Query: 845  YEVMAEQNRKDAEAWFTSRTEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIELQSQLS 1024
            YE +AE+NR+DAEAWF  +++EL  E+  + EQ+   K+E+T+LRRT+QGLEIELQSQL+
Sbjct: 306  YEQLAEKNRRDAEAWFNEKSKELTTEINSNLEQVSSHKSEITELRRTIQGLEIELQSQLA 365

Query: 1025 MKXXXXXXXXXXXXRFGAQLAQIQ 1096
            +K            R+  QL+QIQ
Sbjct: 366  LKQSLEASLAETEGRYCVQLSQIQ 389


  Database: RefSeq49_BP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 17,681,374
  Number of sequences in database:  33,088
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 34,016,746
Number of extensions: 988772
Number of successful extensions: 5065
Number of sequences better than 1.0e-05: 102
Number of HSP's gapped: 4832
Number of HSP's successfully gapped: 102
Length of query: 365
Length of database: 17,681,374
Length adjustment: 104
Effective length of query: 261
Effective length of database: 14,240,222
Effective search space: 3716697942
Effective search space used: 3716697942
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-001864
         (1096 letters)

Database: RefSeq49_CP.fasta 
           33,336 sequences; 18,874,504 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_548099.2| PREDICTED: similar to keratin 17n [Canis famili...   392   e-109
Alignment   gi|XP_548100.1| PREDICTED: similar to type I keratin KA17 isofo...   382   e-106
Alignment   gi|XP_862399.1| PREDICTED: similar to keratin 13 isoform a isof...   377   e-104
Alignment   gi|XP_862372.1| PREDICTED: similar to keratin 13 isoform a isof...   377   e-104
Alignment   gi|XP_548101.2| PREDICTED: similar to Keratin, type I cytoskele...   376   e-104
Alignment   gi|XP_862344.1| PREDICTED: similar to keratin 13 isoform a isof...   353   1e-97
Alignment   gi|XP_548106.2| PREDICTED: similar to keratin 13 isoform a isof...   353   1e-97
Alignment   gi|XP_850765.1| PREDICTED: similar to keratin 13 isoform a isof...   352   4e-97
Alignment   gi|XP_861773.1| PREDICTED: similar to type I keratin KA17 isofo...   337   2e-92
Alignment   gi|NP_001075890.1| keratin 12 [Canis lupus familiaris].              320   1e-87

>ref|XP_548099.2| PREDICTED: similar to keratin 17n [Canis familiaris].
          Length = 469

 Score =  392 bits (1007), Expect = e-109
 Identities = 197/261 (75%), Positives = 230/261 (88%)
 Frame = +2

Query: 314  NEKLTMQNLNDRLASYLEKVRALEQANGDLEVKIRDWYQKQGPGPARDYSHYFKTIEDLR 493
            +EK TMQNLNDRLASYL+KVRALE+AN DLEVKI DWY+KQGPGPARDYSH+FKTIE+LR
Sbjct: 110  SEKETMQNLNDRLASYLDKVRALEEANADLEVKIHDWYKKQGPGPARDYSHFFKTIEELR 169

Query: 494  DKILGATIENSKIVLQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVLDELTLART 673
            +KIL ATI+N+ +VLQIDNARLAADDFRTK+ETE  LR+SVEAD NGLRRVLDELTLAR 
Sbjct: 170  NKILAATIDNASLVLQIDNARLAADDFRTKYETELNLRMSVEADTNGLRRVLDELTLARA 229

Query: 674  DLELQIEGLKEELAYLKKNHEEEISALKGQVGGQVSVEVDSAPGIDLAKILSDMRSQYEV 853
            DLE+QIE LKEELAYLKKNHEEE++AL+GQVGG VSVE+D+APG+DL++IL++MR QYE 
Sbjct: 230  DLEMQIESLKEELAYLKKNHEEEMNALRGQVGGDVSVEMDAAPGVDLSRILNEMRDQYEK 289

Query: 854  MAEQNRKDAEAWFTSRTEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIELQSQLSMKX 1033
            MAE+NRKDAE WF S+TEELNREVA +TE LQ S+TE+T+LRR++Q LEIELQSQLSMK 
Sbjct: 290  MAEKNRKDAEDWFFSKTEELNREVATNTEALQSSRTEITELRRSVQNLEIELQSQLSMKA 349

Query: 1034 XXXXXXXXXXXRFGAQLAQIQ 1096
                       R+GAQLAQ+Q
Sbjct: 350  SLEGSLAETEARYGAQLAQLQ 370


>ref|XP_548100.1| PREDICTED: similar to type I keratin KA17 isoform 1 [Canis
            familiaris].
          Length = 433

 Score =  382 bits (982), Expect = e-106
 Identities = 190/260 (73%), Positives = 229/260 (88%)
 Frame = +2

Query: 317  EKLTMQNLNDRLASYLEKVRALEQANGDLEVKIRDWYQKQGPGPARDYSHYFKTIEDLRD 496
            EK TMQNLNDRLASYL+KVRALE+AN +LEVKIRDWYQKQ PGPARDYSHY++TIEDL++
Sbjct: 84   EKATMQNLNDRLASYLDKVRALEEANTELEVKIRDWYQKQAPGPARDYSHYYQTIEDLKN 143

Query: 497  KILGATIENSKIVLQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVLDELTLARTD 676
            KIL AT++N+ I+LQIDNARLAADDFRTKFETEQALR+SVEAD NGLRRVLDELTL+R D
Sbjct: 144  KILTATVDNANILLQIDNARLAADDFRTKFETEQALRVSVEADTNGLRRVLDELTLSRAD 203

Query: 677  LELQIEGLKEELAYLKKNHEEEISALKGQVGGQVSVEVDSAPGIDLAKILSDMRSQYEVM 856
            LE+QIE LKEELAYL+KNHEEE++AL+GQVGG+++VE+D+APG+DL++ILS+MR QYE M
Sbjct: 204  LEMQIENLKEELAYLRKNHEEEMNALRGQVGGEINVEMDAAPGVDLSRILSEMRDQYEKM 263

Query: 857  AEQNRKDAEAWFTSRTEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIELQSQLSMKXX 1036
            AE+NRKDAE WF S+TEELNREVA ++E +Q  K+E+++LRRT+Q LEIELQSQLSMK  
Sbjct: 264  AEKNRKDAEDWFFSKTEELNREVATNSELVQSGKSEISELRRTVQALEIELQSQLSMKAS 323

Query: 1037 XXXXXXXXXXRFGAQLAQIQ 1096
                      R+  QL+QIQ
Sbjct: 324  LEGSLAETENRYCVQLSQIQ 343


>ref|XP_862399.1| PREDICTED: similar to keratin 13 isoform a isoform 7 [Canis
            familiaris].
          Length = 807

 Score =  377 bits (967), Expect = e-104
 Identities = 188/262 (71%), Positives = 219/262 (83%), Gaps = 1/262 (0%)
 Frame = +2

Query: 314  NEKLTMQNLNDRLASYLEKVRALEQANGDLEVKIRDWYQKQGPG-PARDYSHYFKTIEDL 490
            NEK+TMQNLNDRLASYL+KV ALE+ANGDLEVKIRDWYQKQ P  P RDYS YFKTIE+L
Sbjct: 102  NEKITMQNLNDRLASYLDKVHALEEANGDLEVKIRDWYQKQSPSSPERDYSPYFKTIEEL 161

Query: 491  RDKILGATIENSKIVLQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVLDELTLAR 670
            RDKIL ATI+NS+++L+IDNARLAADDFR K+E E  LR  VEADINGLRRVLDELTLA+
Sbjct: 162  RDKILAATIDNSRVILEIDNARLAADDFRLKYENELTLRQGVEADINGLRRVLDELTLAK 221

Query: 671  TDLELQIEGLKEELAYLKKNHEEEISALKGQVGGQVSVEVDSAPGIDLAKILSDMRSQYE 850
             DLE+QIEGL EELAYLKKNHEEE+     Q+ GQV+VE+D+APG+DL ++L++MR QYE
Sbjct: 222  ADLEMQIEGLNEELAYLKKNHEEEMKEFSSQLAGQVNVEMDAAPGVDLTRVLAEMREQYE 281

Query: 851  VMAEQNRKDAEAWFTSRTEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIELQSQLSMK 1030
             MAE+NR+DAEAWF S+TEELN+EVA +TE +Q SKTE+TDLRRT+QGLEIELQSQLSMK
Sbjct: 282  AMAEKNRRDAEAWFFSKTEELNKEVASNTEMIQTSKTEITDLRRTMQGLEIELQSQLSMK 341

Query: 1031 XXXXXXXXXXXXRFGAQLAQIQ 1096
                        R+  QL QIQ
Sbjct: 342  AGLESSLAETECRYATQLQQIQ 363



 Score =  353 bits (907), Expect = 1e-97
 Identities = 178/262 (67%), Positives = 215/262 (82%), Gaps = 1/262 (0%)
 Frame = +2

Query: 314  NEKLTMQNLNDRLASYLEKVRALEQANGDLEVKIRDWYQKQGPG-PARDYSHYFKTIEDL 490
            NEK+TMQNLNDRLASYL+KVRALE+AN +LEVKIRDW+ KQ P  P RDYS Y+KTIE+L
Sbjct: 495  NEKITMQNLNDRLASYLDKVRALEEANTELEVKIRDWHLKQSPSSPERDYSPYYKTIEEL 554

Query: 491  RDKILGATIENSKIVLQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVLDELTLAR 670
            RDKIL ATI+N++++L+IDNARLAADDFR K+E E  LR SVEADINGLRRVLDELTL++
Sbjct: 555  RDKILAATIDNNRVILEIDNARLAADDFRLKYENELTLRQSVEADINGLRRVLDELTLSK 614

Query: 671  TDLELQIEGLKEELAYLKKNHEEEISALKGQVGGQVSVEVDSAPGIDLAKILSDMRSQYE 850
            TDLE+QIE L EELAYLKKNHEEE+     Q+ GQV+VE+D+ PGIDL ++L++MR QYE
Sbjct: 615  TDLEMQIESLNEELAYLKKNHEEEMKEFSNQMVGQVNVEMDATPGIDLTRVLAEMREQYE 674

Query: 851  VMAEQNRKDAEAWFTSRTEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIELQSQLSMK 1030
             MAE+NR+DAE WF S++ ELN+EV+ +T  +Q SKTE+T+LRRTLQGLEIELQSQLSMK
Sbjct: 675  AMAEKNRRDAEEWFHSKSAELNKEVSTNTAMIQTSKTEITELRRTLQGLEIELQSQLSMK 734

Query: 1031 XXXXXXXXXXXXRFGAQLAQIQ 1096
                        R+  QL QIQ
Sbjct: 735  AGLESTLADTECRYALQLQQIQ 756


>ref|XP_862372.1| PREDICTED: similar to keratin 13 isoform a isoform 6 [Canis
            familiaris].
          Length = 811

 Score =  377 bits (967), Expect = e-104
 Identities = 188/262 (71%), Positives = 219/262 (83%), Gaps = 1/262 (0%)
 Frame = +2

Query: 314  NEKLTMQNLNDRLASYLEKVRALEQANGDLEVKIRDWYQKQGPG-PARDYSHYFKTIEDL 490
            NEK+TMQNLNDRLASYL+KV ALE+ANGDLEVKIRDWYQKQ P  P RDYS YFKTIE+L
Sbjct: 106  NEKITMQNLNDRLASYLDKVHALEEANGDLEVKIRDWYQKQSPSSPERDYSPYFKTIEEL 165

Query: 491  RDKILGATIENSKIVLQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVLDELTLAR 670
            RDKIL ATI+NS+++L+IDNARLAADDFR K+E E  LR  VEADINGLRRVLDELTLA+
Sbjct: 166  RDKILAATIDNSRVILEIDNARLAADDFRLKYENELTLRQGVEADINGLRRVLDELTLAK 225

Query: 671  TDLELQIEGLKEELAYLKKNHEEEISALKGQVGGQVSVEVDSAPGIDLAKILSDMRSQYE 850
             DLE+QIEGL EELAYLKKNHEEE+     Q+ GQV+VE+D+APG+DL ++L++MR QYE
Sbjct: 226  ADLEMQIEGLNEELAYLKKNHEEEMKEFSSQLAGQVNVEMDAAPGVDLTRVLAEMREQYE 285

Query: 851  VMAEQNRKDAEAWFTSRTEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIELQSQLSMK 1030
             MAE+NR+DAEAWF S+TEELN+EVA +TE +Q SKTE+TDLRRT+QGLEIELQSQLSMK
Sbjct: 286  AMAEKNRRDAEAWFFSKTEELNKEVASNTEMIQTSKTEITDLRRTMQGLEIELQSQLSMK 345

Query: 1031 XXXXXXXXXXXXRFGAQLAQIQ 1096
                        R+  QL QIQ
Sbjct: 346  AGLESSLAETECRYATQLQQIQ 367



 Score =  353 bits (907), Expect = 1e-97
 Identities = 178/262 (67%), Positives = 215/262 (82%), Gaps = 1/262 (0%)
 Frame = +2

Query: 314  NEKLTMQNLNDRLASYLEKVRALEQANGDLEVKIRDWYQKQGPG-PARDYSHYFKTIEDL 490
            NEK+TMQNLNDRLASYL+KVRALE+AN +LEVKIRDW+ KQ P  P RDYS Y+KTIE+L
Sbjct: 499  NEKITMQNLNDRLASYLDKVRALEEANTELEVKIRDWHLKQSPSSPERDYSPYYKTIEEL 558

Query: 491  RDKILGATIENSKIVLQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVLDELTLAR 670
            RDKIL ATI+N++++L+IDNARLAADDFR K+E E  LR SVEADINGLRRVLDELTL++
Sbjct: 559  RDKILAATIDNNRVILEIDNARLAADDFRLKYENELTLRQSVEADINGLRRVLDELTLSK 618

Query: 671  TDLELQIEGLKEELAYLKKNHEEEISALKGQVGGQVSVEVDSAPGIDLAKILSDMRSQYE 850
            TDLE+QIE L EELAYLKKNHEEE+     Q+ GQV+VE+D+ PGIDL ++L++MR QYE
Sbjct: 619  TDLEMQIESLNEELAYLKKNHEEEMKEFSNQMVGQVNVEMDATPGIDLTRVLAEMREQYE 678

Query: 851  VMAEQNRKDAEAWFTSRTEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIELQSQLSMK 1030
             MAE+NR+DAE WF S++ ELN+EV+ +T  +Q SKTE+T+LRRTLQGLEIELQSQLSMK
Sbjct: 679  AMAEKNRRDAEEWFHSKSAELNKEVSTNTAMIQTSKTEITELRRTLQGLEIELQSQLSMK 738

Query: 1031 XXXXXXXXXXXXRFGAQLAQIQ 1096
                        R+  QL QIQ
Sbjct: 739  AGLESTLADTECRYALQLQQIQ 760


>ref|XP_548101.2| PREDICTED: similar to Keratin, type I cytoskeletal 16 (Cytokeratin
            16) (K16) (CK 16) [Canis familiaris].
          Length = 477

 Score =  376 bits (965), Expect = e-104
 Identities = 191/261 (73%), Positives = 225/261 (86%)
 Frame = +2

Query: 314  NEKLTMQNLNDRLASYLEKVRALEQANGDLEVKIRDWYQKQGPGPARDYSHYFKTIEDLR 493
            NEKLTMQNLNDRLASYL+KVRALE+AN +LEVKIRDWYQ+Q P  A+DYS YFKTIEDLR
Sbjct: 117  NEKLTMQNLNDRLASYLDKVRALEEANTELEVKIRDWYQRQRPSEAKDYSPYFKTIEDLR 176

Query: 494  DKILGATIENSKIVLQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVLDELTLART 673
            +KI+ ATIEN++ +LQIDNARLAADDFRTK+E E  LR SVEADINGLRRVLDELTL+RT
Sbjct: 177  NKIITATIENAQPILQIDNARLAADDFRTKYEHELTLRQSVEADINGLRRVLDELTLSRT 236

Query: 674  DLELQIEGLKEELAYLKKNHEEEISALKGQVGGQVSVEVDSAPGIDLAKILSDMRSQYEV 853
            DLE+QIEGLKEELAYL+KNHEEE+ AL+GQ GG VSVE+D+APG+DL++IL++MR QYE 
Sbjct: 237  DLEMQIEGLKEELAYLRKNHEEEMLALRGQTGGDVSVEMDAAPGVDLSRILNEMRDQYEQ 296

Query: 854  MAEQNRKDAEAWFTSRTEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIELQSQLSMKX 1033
            MAE+NR+DAEAWF S+TEELN+EV  ++E LQ  ++EVT+LRRTLQGLEIELQSQLSMK 
Sbjct: 297  MAEKNRRDAEAWFLSKTEELNKEVVSNSELLQSGRSEVTELRRTLQGLEIELQSQLSMKA 356

Query: 1034 XXXXXXXXXXXRFGAQLAQIQ 1096
                       R+  QL+QIQ
Sbjct: 357  SLESSLEETKGRYCMQLSQIQ 377


>ref|XP_862344.1| PREDICTED: similar to keratin 13 isoform a isoform 5 [Canis
            familiaris].
          Length = 692

 Score =  353 bits (907), Expect = 1e-97
 Identities = 178/262 (67%), Positives = 215/262 (82%), Gaps = 1/262 (0%)
 Frame = +2

Query: 314  NEKLTMQNLNDRLASYLEKVRALEQANGDLEVKIRDWYQKQGPG-PARDYSHYFKTIEDL 490
            NEK+TMQNLNDRLASYL+KVRALE+AN +LEVKIRDW+ KQ P  P RDYS Y+KTIE+L
Sbjct: 380  NEKITMQNLNDRLASYLDKVRALEEANTELEVKIRDWHLKQSPSSPERDYSPYYKTIEEL 439

Query: 491  RDKILGATIENSKIVLQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVLDELTLAR 670
            RDKIL ATI+N++++L+IDNARLAADDFR K+E E  LR SVEADINGLRRVLDELTL++
Sbjct: 440  RDKILAATIDNNRVILEIDNARLAADDFRLKYENELTLRQSVEADINGLRRVLDELTLSK 499

Query: 671  TDLELQIEGLKEELAYLKKNHEEEISALKGQVGGQVSVEVDSAPGIDLAKILSDMRSQYE 850
            TDLE+QIE L EELAYLKKNHEEE+     Q+ GQV+VE+D+ PGIDL ++L++MR QYE
Sbjct: 500  TDLEMQIESLNEELAYLKKNHEEEMKEFSNQMVGQVNVEMDATPGIDLTRVLAEMREQYE 559

Query: 851  VMAEQNRKDAEAWFTSRTEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIELQSQLSMK 1030
             MAE+NR+DAE WF S++ ELN+EV+ +T  +Q SKTE+T+LRRTLQGLEIELQSQLSMK
Sbjct: 560  AMAEKNRRDAEEWFHSKSAELNKEVSTNTAMIQTSKTEITELRRTLQGLEIELQSQLSMK 619

Query: 1031 XXXXXXXXXXXXRFGAQLAQIQ 1096
                        R+  QL QIQ
Sbjct: 620  AGLESTLADTECRYALQLQQIQ 641



 Score =  335 bits (859), Expect(2) = 8e-93
 Identities = 168/242 (69%), Positives = 196/242 (80%), Gaps = 1/242 (0%)
 Frame = +2

Query: 374  RALEQANGDLEVKIRDWYQKQGPG-PARDYSHYFKTIEDLRDKILGATIENSKIVLQIDN 550
            R    ANGDLEVKIRDWYQKQ P  P RDYS YFKTIE+LRDKIL ATI+NS+++L+IDN
Sbjct: 7    RTSTTANGDLEVKIRDWYQKQSPSSPERDYSPYFKTIEELRDKILAATIDNSRVILEIDN 66

Query: 551  ARLAADDFRTKFETEQALRLSVEADINGLRRVLDELTLARTDLELQIEGLKEELAYLKKN 730
            ARLAADDFR K+E E  LR  VEADINGLRRVLDELTLA+ DLE+QIEGL EELAYLKKN
Sbjct: 67   ARLAADDFRLKYENELTLRQGVEADINGLRRVLDELTLAKADLEMQIEGLNEELAYLKKN 126

Query: 731  HEEEISALKGQVGGQVSVEVDSAPGIDLAKILSDMRSQYEVMAEQNRKDAEAWFTSRTEE 910
            HEEE+     Q+ GQV+VE+D+APG+DL ++L++MR QYE MAE+NR+DAEAWF S+TEE
Sbjct: 127  HEEEMKEFSSQLAGQVNVEMDAAPGVDLTRVLAEMREQYEAMAEKNRRDAEAWFFSKTEE 186

Query: 911  LNREVAGHTEQLQISKTEVTDLRRTLQGLEIELQSQLSMKXXXXXXXXXXXXRFGAQLAQ 1090
            LN+EVA +TE +Q SKTE+TDLRRT+QGLEIELQSQLSMK            R+  QL Q
Sbjct: 187  LNKEVASNTEMIQTSKTEITDLRRTMQGLEIELQSQLSMKAGLESSLAETECRYATQLQQ 246

Query: 1091 IQ 1096
            IQ
Sbjct: 247  IQ 248



 Score = 25.0 bits (53), Expect(2) = 8e-93
 Identities = 10/11 (90%), Positives = 10/11 (90%)
 Frame = +3

Query: 318 RNSPCRTSTTA 350
           R SPCRTSTTA
Sbjct: 2   RRSPCRTSTTA 12


>ref|XP_548106.2| PREDICTED: similar to keratin 13 isoform a isoform 1 [Canis
            familiaris].
          Length = 407

 Score =  353 bits (907), Expect = 1e-97
 Identities = 178/262 (67%), Positives = 215/262 (82%), Gaps = 1/262 (0%)
 Frame = +2

Query: 314  NEKLTMQNLNDRLASYLEKVRALEQANGDLEVKIRDWYQKQGPG-PARDYSHYFKTIEDL 490
            NEK+TMQNLNDRLASYL+KVRALE+AN +LEVKIRDW+ KQ P  P RDYS Y+KTIE+L
Sbjct: 95   NEKITMQNLNDRLASYLDKVRALEEANTELEVKIRDWHLKQSPSSPERDYSPYYKTIEEL 154

Query: 491  RDKILGATIENSKIVLQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVLDELTLAR 670
            RDKIL ATI+N++++L+IDNARLAADDFR K+E E  LR SVEADINGLRRVLDELTL++
Sbjct: 155  RDKILAATIDNNRVILEIDNARLAADDFRLKYENELTLRQSVEADINGLRRVLDELTLSK 214

Query: 671  TDLELQIEGLKEELAYLKKNHEEEISALKGQVGGQVSVEVDSAPGIDLAKILSDMRSQYE 850
            TDLE+QIE L EELAYLKKNHEEE+     Q+ GQV+VE+D+ PGIDL ++L++MR QYE
Sbjct: 215  TDLEMQIESLNEELAYLKKNHEEEMKEFSNQMVGQVNVEMDATPGIDLTRVLAEMREQYE 274

Query: 851  VMAEQNRKDAEAWFTSRTEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIELQSQLSMK 1030
             MAE+NR+DAE WF S++ ELN+EV+ +T  +Q SKTE+T+LRRTLQGLEIELQSQLSMK
Sbjct: 275  AMAEKNRRDAEEWFHSKSAELNKEVSTNTAMIQTSKTEITELRRTLQGLEIELQSQLSMK 334

Query: 1031 XXXXXXXXXXXXRFGAQLAQIQ 1096
                        R+  QL QIQ
Sbjct: 335  AGLESTLADTECRYALQLQQIQ 356


>ref|XP_850765.1| PREDICTED: similar to keratin 13 isoform a isoform 2 [Canis
            familiaris].
          Length = 404

 Score =  352 bits (903), Expect = 4e-97
 Identities = 177/262 (67%), Positives = 214/262 (81%), Gaps = 1/262 (0%)
 Frame = +2

Query: 314  NEKLTMQNLNDRLASYLEKVRALEQANGDLEVKIRDWYQKQGPG-PARDYSHYFKTIEDL 490
            NEK+TMQNLNDRLASYL+KVRALE+AN +LEVKIRDW+ KQ P  P RDYS Y+KTIE+L
Sbjct: 63   NEKITMQNLNDRLASYLDKVRALEEANTELEVKIRDWHLKQSPSSPERDYSPYYKTIEEL 122

Query: 491  RDKILGATIENSKIVLQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVLDELTLAR 670
            RDKIL ATI+N++++L+IDNARLAADDFR K+E E  LR SVEADINGLRRVLDELTL++
Sbjct: 123  RDKILAATIDNNRVILEIDNARLAADDFRLKYENELTLRQSVEADINGLRRVLDELTLSK 182

Query: 671  TDLELQIEGLKEELAYLKKNHEEEISALKGQVGGQVSVEVDSAPGIDLAKILSDMRSQYE 850
            TDLE+QIE L EELAYLKKNHEEE+     Q+ GQV+VE+D+ PGIDL ++L++MR QYE
Sbjct: 183  TDLEMQIESLNEELAYLKKNHEEEMKEFSNQMVGQVNVEMDATPGIDLTRVLAEMREQYE 242

Query: 851  VMAEQNRKDAEAWFTSRTEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIELQSQLSMK 1030
             MAE+NR+DAE WF S+  +LN+EV+ +T  +Q SKTE+T+LRRTLQGLEIELQSQLSMK
Sbjct: 243  AMAEKNRRDAEEWFHSKVPQLNKEVSTNTAMIQTSKTEITELRRTLQGLEIELQSQLSMK 302

Query: 1031 XXXXXXXXXXXXRFGAQLAQIQ 1096
                        R+  QL QIQ
Sbjct: 303  AGLESTLADTECRYALQLQQIQ 324


>ref|XP_861773.1| PREDICTED: similar to type I keratin KA17 isoform 2 [Canis
            familiaris].
          Length = 413

 Score =  337 bits (863), Expect = 2e-92
 Identities = 172/260 (66%), Positives = 210/260 (80%)
 Frame = +2

Query: 317  EKLTMQNLNDRLASYLEKVRALEQANGDLEVKIRDWYQKQGPGPARDYSHYFKTIEDLRD 496
            EK TMQNLNDRLASYL+KVRALE+AN +LEVKIRDWYQKQ PGPARDYSHY++TIEDL++
Sbjct: 84   EKATMQNLNDRLASYLDKVRALEEANTELEVKIRDWYQKQAPGPARDYSHYYQTIEDLKN 143

Query: 497  KILGATIENSKIVLQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVLDELTLARTD 676
            KIL AT++N+ I+LQIDNARLAADDFRTK                    VLDELTL+R D
Sbjct: 144  KILTATVDNANILLQIDNARLAADDFRTK--------------------VLDELTLSRAD 183

Query: 677  LELQIEGLKEELAYLKKNHEEEISALKGQVGGQVSVEVDSAPGIDLAKILSDMRSQYEVM 856
            LE+QIE LKEELAYL+KNHEEE++AL+GQVGG+++VE+D+APG+DL++ILS+MR QYE M
Sbjct: 184  LEMQIENLKEELAYLRKNHEEEMNALRGQVGGEINVEMDAAPGVDLSRILSEMRDQYEKM 243

Query: 857  AEQNRKDAEAWFTSRTEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIELQSQLSMKXX 1036
            AE+NRKDAE WF S+TEELNREVA ++E +Q  K+E+++LRRT+Q LEIELQSQLSMK  
Sbjct: 244  AEKNRKDAEDWFFSKTEELNREVATNSELVQSGKSEISELRRTVQALEIELQSQLSMKAS 303

Query: 1037 XXXXXXXXXXRFGAQLAQIQ 1096
                      R+  QL+QIQ
Sbjct: 304  LEGSLAETENRYCVQLSQIQ 323


>ref|NP_001075890.1| keratin 12 [Canis lupus familiaris].
          Length = 507

 Score =  320 bits (821), Expect = 1e-87
 Identities = 164/266 (61%), Positives = 208/266 (78%), Gaps = 5/266 (1%)
 Frame = +2

Query: 314  NEKLTMQNLNDRLASYLEKVRALEQANGDLEVKIRDWYQKQG-----PGPARDYSHYFKT 478
            +EK TMQNLNDRLASYL+KVRALE+AN +LE KIR+WY+ +G     PG   DYS Y+  
Sbjct: 138  SEKETMQNLNDRLASYLDKVRALEEANTELENKIREWYETRGSGTGDPGSQSDYSKYYPL 197

Query: 479  IEDLRDKILGATIENSKIVLQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVLDEL 658
            IEDLR++I+ A+I N++++LQIDNARLAA+DFR K+E E AL  SVEADINGLRRVLDEL
Sbjct: 198  IEDLRNEIISASIGNAQLILQIDNARLAAEDFRMKYENELALHQSVEADINGLRRVLDEL 257

Query: 659  TLARTDLELQIEGLKEELAYLKKNHEEEISALKGQVGGQVSVEVDSAPGIDLAKILSDMR 838
            TLAR DLE+QIE L EELAYLKKNHEEE+ + +    G++SVE+D+AP +DL ++L++MR
Sbjct: 258  TLARADLEMQIENLTEELAYLKKNHEEELQSFRAGGPGEISVEMDAAPAVDLTRLLNNMR 317

Query: 839  SQYEVMAEQNRKDAEAWFTSRTEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIELQSQ 1018
            +QYE +AEQNRKDAEAWF  ++ EL +E++ +TEQLQ SK+EVTDLRR LQ LEIELQSQ
Sbjct: 318  AQYEAIAEQNRKDAEAWFIEKSGELRKEISTNTEQLQSSKSEVTDLRRALQNLEIELQSQ 377

Query: 1019 LSMKXXXXXXXXXXXXRFGAQLAQIQ 1096
            L+ K             +  QL+Q+Q
Sbjct: 378  LATKKSLEASLAEVEGDYCGQLSQVQ 403


  Database: RefSeq49_CP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,874,504
  Number of sequences in database:  33,336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 35,425,135
Number of extensions: 988201
Number of successful extensions: 5511
Number of sequences better than 1.0e-05: 118
Number of HSP's gapped: 5221
Number of HSP's successfully gapped: 127
Length of query: 365
Length of database: 18,874,504
Length adjustment: 104
Effective length of query: 261
Effective length of database: 15,407,560
Effective search space: 4021373160
Effective search space used: 4021373160
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-001864
         (1096 letters)

Database: RefSeq49_HP.fasta 
           32,964 sequences; 18,297,164 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_002267.2| keratin, type I cytoskeletal 19 [Homo sapiens].      452   e-127
Alignment   gi|NP_000413.1| keratin, type I cytoskeletal 17 [Homo sapiens].      381   e-106
Alignment   gi|NP_000517.2| keratin, type I cytoskeletal 14 [Homo sapiens].      372   e-103
Alignment   gi|NP_005548.2| keratin, type I cytoskeletal 16 [Homo sapiens].      372   e-103
Alignment   gi|NP_002266.2| keratin, type I cytoskeletal 15 [Homo sapiens].      369   e-102
Alignment   gi|NP_002265.2| keratin, type I cytoskeletal 13 isoform b [Homo...   358   5e-99
Alignment   gi|NP_705694.2| keratin, type I cytoskeletal 13 isoform a [Homo...   358   5e-99
Alignment   gi|NP_000214.1| keratin, type I cytoskeletal 12 [Homo sapiens].      325   3e-89
Alignment   gi|NP_000412.3| keratin, type I cytoskeletal 10 [Homo sapiens].      319   2e-87
Alignment   gi|NP_003762.1| keratin, type I cuticular Ha6 [Homo sapiens].        306   2e-83

>ref|NP_002267.2| keratin, type I cytoskeletal 19 [Homo sapiens].
          Length = 400

 Score =  452 bits (1163), Expect = e-127
 Identities = 232/261 (88%), Positives = 244/261 (93%)
 Frame = +2

Query: 314  NEKLTMQNLNDRLASYLEKVRALEQANGDLEVKIRDWYQKQGPGPARDYSHYFKTIEDLR 493
            NEKLTMQNLNDRLASYL+KVRALE ANG+LEVKIRDWYQKQGPGP+RDYSHY+ TI+DLR
Sbjct: 79   NEKLTMQNLNDRLASYLDKVRALEAANGELEVKIRDWYQKQGPGPSRDYSHYYTTIQDLR 138

Query: 494  DKILGATIENSKIVLQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVLDELTLART 673
            DKILGATIENS+IVLQIDNARLAADDFRTKFETEQALR+SVEADINGLRRVLDELTLART
Sbjct: 139  DKILGATIENSRIVLQIDNARLAADDFRTKFETEQALRMSVEADINGLRRVLDELTLART 198

Query: 674  DLELQIEGLKEELAYLKKNHEEEISALKGQVGGQVSVEVDSAPGIDLAKILSDMRSQYEV 853
            DLE+QIEGLKEELAYLKKNHEEEIS L+GQVGGQVSVEVDSAPG DLAKILSDMRSQYEV
Sbjct: 199  DLEMQIEGLKEELAYLKKNHEEEISTLRGQVGGQVSVEVDSAPGTDLAKILSDMRSQYEV 258

Query: 854  MAEQNRKDAEAWFTSRTEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIELQSQLSMKX 1033
            MAEQNRKDAEAWFTSRTEELNREVAGHTEQLQ+S++EVTDLRRTLQGLEIELQSQLSMK 
Sbjct: 259  MAEQNRKDAEAWFTSRTEELNREVAGHTEQLQMSRSEVTDLRRTLQGLEIELQSQLSMKA 318

Query: 1034 XXXXXXXXXXXRFGAQLAQIQ 1096
                       RFGAQLA IQ
Sbjct: 319  ALEDTLAETEARFGAQLAHIQ 339


>ref|NP_000413.1| keratin, type I cytoskeletal 17 [Homo sapiens].
          Length = 432

 Score =  381 bits (979), Expect = e-106
 Identities = 190/260 (73%), Positives = 229/260 (88%)
 Frame = +2

Query: 317  EKLTMQNLNDRLASYLEKVRALEQANGDLEVKIRDWYQKQGPGPARDYSHYFKTIEDLRD 496
            EK TMQNLNDRLASYL+KVRALE+AN +LEVKIRDWYQ+Q PGPARDYS Y++TIE+L++
Sbjct: 84   EKATMQNLNDRLASYLDKVRALEEANTELEVKIRDWYQRQAPGPARDYSQYYRTIEELQN 143

Query: 497  KILGATIENSKIVLQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVLDELTLARTD 676
            KIL AT++N+ I+LQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVLDELTLAR D
Sbjct: 144  KILTATVDNANILLQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVLDELTLARAD 203

Query: 677  LELQIEGLKEELAYLKKNHEEEISALKGQVGGQVSVEVDSAPGIDLAKILSDMRSQYEVM 856
            LE+QIE LKEELAYLKKNHEEE++AL+GQVGG+++VE+D+APG+DL++IL++MR QYE M
Sbjct: 204  LEMQIENLKEELAYLKKNHEEEMNALRGQVGGEINVEMDAAPGVDLSRILNEMRDQYEKM 263

Query: 857  AEQNRKDAEAWFTSRTEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIELQSQLSMKXX 1036
            AE+NRKDAE WF S+TEELNREVA ++E +Q  K+E+++LRRT+Q LEIELQSQLSMK  
Sbjct: 264  AEKNRKDAEDWFFSKTEELNREVATNSELVQSGKSEISELRRTMQALEIELQSQLSMKAS 323

Query: 1037 XXXXXXXXXXRFGAQLAQIQ 1096
                      R+  QL+QIQ
Sbjct: 324  LEGNLAETENRYCVQLSQIQ 343


>ref|NP_000517.2| keratin, type I cytoskeletal 14 [Homo sapiens].
          Length = 472

 Score =  372 bits (956), Expect = e-103
 Identities = 187/261 (71%), Positives = 225/261 (86%)
 Frame = +2

Query: 314  NEKLTMQNLNDRLASYLEKVRALEQANGDLEVKIRDWYQKQGPGPARDYSHYFKTIEDLR 493
            +EK+TMQNLNDRLASYL+KVRALE+AN DLEVKIRDWYQ+Q P   +DYS YFKTIEDLR
Sbjct: 114  SEKVTMQNLNDRLASYLDKVRALEEANADLEVKIRDWYQRQRPAEIKDYSPYFKTIEDLR 173

Query: 494  DKILGATIENSKIVLQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVLDELTLART 673
            +KIL AT++N+ ++LQIDNARLAADDFRTK+ETE  LR+SVEADINGLRRVLDELTLAR 
Sbjct: 174  NKILTATVDNANVLLQIDNARLAADDFRTKYETELNLRMSVEADINGLRRVLDELTLARA 233

Query: 674  DLELQIEGLKEELAYLKKNHEEEISALKGQVGGQVSVEVDSAPGIDLAKILSDMRSQYEV 853
            DLE+QIE LKEELAYLKKNHEEE++AL+GQVGG V+VE+D+APG+DL++IL++MR QYE 
Sbjct: 234  DLEMQIESLKEELAYLKKNHEEEMNALRGQVGGDVNVEMDAAPGVDLSRILNEMRDQYEK 293

Query: 854  MAEQNRKDAEAWFTSRTEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIELQSQLSMKX 1033
            MAE+NRKDAE WF ++TEELNREVA ++E +Q  K+E+++LRRT+Q LEIELQSQLSMK 
Sbjct: 294  MAEKNRKDAEEWFFTKTEELNREVATNSELVQSGKSEISELRRTMQNLEIELQSQLSMKA 353

Query: 1034 XXXXXXXXXXXRFGAQLAQIQ 1096
                       R+  QLAQIQ
Sbjct: 354  SLENSLEETKGRYCMQLAQIQ 374


>ref|NP_005548.2| keratin, type I cytoskeletal 16 [Homo sapiens].
          Length = 473

 Score =  372 bits (956), Expect = e-103
 Identities = 187/261 (71%), Positives = 225/261 (86%)
 Frame = +2

Query: 314  NEKLTMQNLNDRLASYLEKVRALEQANGDLEVKIRDWYQKQGPGPARDYSHYFKTIEDLR 493
            +EK+TMQNLNDRLASYL+KVRALE+AN DLEVKIRDWYQ+Q P   +DYS YFKTIEDLR
Sbjct: 116  SEKVTMQNLNDRLASYLDKVRALEEANADLEVKIRDWYQRQRPSEIKDYSPYFKTIEDLR 175

Query: 494  DKILGATIENSKIVLQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVLDELTLART 673
            +KI+ ATIEN++ +LQIDNARLAADDFRTK+E E ALR +VEAD+NGLRRVLDELTLART
Sbjct: 176  NKIIAATIENAQPILQIDNARLAADDFRTKYEHELALRQTVEADVNGLRRVLDELTLART 235

Query: 674  DLELQIEGLKEELAYLKKNHEEEISALKGQVGGQVSVEVDSAPGIDLAKILSDMRSQYEV 853
            DLE+QIEGLKEELAYL+KNHEEE+ AL+GQ GG V+VE+D+APG+DL++IL++MR QYE 
Sbjct: 236  DLEMQIEGLKEELAYLRKNHEEEMLALRGQTGGDVNVEMDAAPGVDLSRILNEMRDQYEQ 295

Query: 854  MAEQNRKDAEAWFTSRTEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIELQSQLSMKX 1033
            MAE+NR+DAE WF S+TEELN+EVA ++E +Q S++EVT+LRR LQGLEIELQSQLSMK 
Sbjct: 296  MAEKNRRDAETWFLSKTEELNKEVASNSELVQSSRSEVTELRRVLQGLEIELQSQLSMKA 355

Query: 1034 XXXXXXXXXXXRFGAQLAQIQ 1096
                       R+  QL+QIQ
Sbjct: 356  SLENSLEETKGRYCMQLSQIQ 376


>ref|NP_002266.2| keratin, type I cytoskeletal 15 [Homo sapiens].
          Length = 456

 Score =  369 bits (947), Expect = e-102
 Identities = 185/262 (70%), Positives = 216/262 (82%), Gaps = 1/262 (0%)
 Frame = +2

Query: 314  NEKLTMQNLNDRLASYLEKVRALEQANGDLEVKIRDWYQKQGP-GPARDYSHYFKTIEDL 490
            NEK+TMQNLNDRLASYL+KVRALE+AN DLEVKI DWYQKQ P  P  DYS YFKTIE+L
Sbjct: 104  NEKITMQNLNDRLASYLDKVRALEEANADLEVKIHDWYQKQTPTSPECDYSQYFKTIEEL 163

Query: 491  RDKILGATIENSKIVLQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVLDELTLAR 670
            RDKI+  TI+NS+++L+IDNARLAADDFR K+E E ALR  VEADINGLRRVLDELTLAR
Sbjct: 164  RDKIMATTIDNSRVILEIDNARLAADDFRLKYENELALRQGVEADINGLRRVLDELTLAR 223

Query: 671  TDLELQIEGLKEELAYLKKNHEEEISALKGQVGGQVSVEVDSAPGIDLAKILSDMRSQYE 850
            TDLE+QIEGL EELAYLKKNHEEE+     Q+ GQV+VE+D+APG+DL ++L++MR QYE
Sbjct: 224  TDLEMQIEGLNEELAYLKKNHEEEMKEFSSQLAGQVNVEMDAAPGVDLTRVLAEMREQYE 283

Query: 851  VMAEQNRKDAEAWFTSRTEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIELQSQLSMK 1030
             MAE+NR+D EAWF S+TEELN+EVA +TE +Q SKTE+TDLRRT+Q LEIELQSQLSMK
Sbjct: 284  AMAEKNRRDVEAWFFSKTEELNKEVASNTEMIQTSKTEITDLRRTMQELEIELQSQLSMK 343

Query: 1031 XXXXXXXXXXXXRFGAQLAQIQ 1096
                        R+  QL QIQ
Sbjct: 344  AGLENSLAETECRYATQLQQIQ 365


>ref|NP_002265.2| keratin, type I cytoskeletal 13 isoform b [Homo sapiens].
          Length = 420

 Score =  358 bits (919), Expect = 5e-99
 Identities = 181/262 (69%), Positives = 216/262 (82%), Gaps = 1/262 (0%)
 Frame = +2

Query: 314  NEKLTMQNLNDRLASYLEKVRALEQANGDLEVKIRDWYQKQGPG-PARDYSHYFKTIEDL 490
            NEK+TMQNLNDRLASYLEKVRALE+AN DLEVKIRDW+ KQ P  P RDYS Y+KTIE+L
Sbjct: 103  NEKITMQNLNDRLASYLEKVRALEEANADLEVKIRDWHLKQSPASPERDYSPYYKTIEEL 162

Query: 491  RDKILGATIENSKIVLQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVLDELTLAR 670
            RDKIL ATIEN++++L+IDNARLAADDFR K+E E ALR SVEADINGLRRVLDELTL++
Sbjct: 163  RDKILTATIENNRVILEIDNARLAADDFRLKYENELALRQSVEADINGLRRVLDELTLSK 222

Query: 671  TDLELQIEGLKEELAYLKKNHEEEISALKGQVGGQVSVEVDSAPGIDLAKILSDMRSQYE 850
            TDLE+QIE L EELAY+KKNHEEE+     QV GQV+VE+D+ PGIDL ++L++MR QYE
Sbjct: 223  TDLEMQIESLNEELAYMKKNHEEEMKEFSNQVVGQVNVEMDATPGIDLTRVLAEMREQYE 282

Query: 851  VMAEQNRKDAEAWFTSRTEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIELQSQLSMK 1030
             MAE+NR+DAE WF +++ ELN+EV+ +T  +Q SKTE+T+LRRTLQGLEIELQSQLSMK
Sbjct: 283  AMAERNRRDAEEWFHAKSAELNKEVSTNTAMIQTSKTEITELRRTLQGLEIELQSQLSMK 342

Query: 1031 XXXXXXXXXXXXRFGAQLAQIQ 1096
                        R+  QL QIQ
Sbjct: 343  AGLENTVAETECRYALQLQQIQ 364


>ref|NP_705694.2| keratin, type I cytoskeletal 13 isoform a [Homo sapiens].
          Length = 458

 Score =  358 bits (919), Expect = 5e-99
 Identities = 181/262 (69%), Positives = 216/262 (82%), Gaps = 1/262 (0%)
 Frame = +2

Query: 314  NEKLTMQNLNDRLASYLEKVRALEQANGDLEVKIRDWYQKQGPG-PARDYSHYFKTIEDL 490
            NEK+TMQNLNDRLASYLEKVRALE+AN DLEVKIRDW+ KQ P  P RDYS Y+KTIE+L
Sbjct: 103  NEKITMQNLNDRLASYLEKVRALEEANADLEVKIRDWHLKQSPASPERDYSPYYKTIEEL 162

Query: 491  RDKILGATIENSKIVLQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVLDELTLAR 670
            RDKIL ATIEN++++L+IDNARLAADDFR K+E E ALR SVEADINGLRRVLDELTL++
Sbjct: 163  RDKILTATIENNRVILEIDNARLAADDFRLKYENELALRQSVEADINGLRRVLDELTLSK 222

Query: 671  TDLELQIEGLKEELAYLKKNHEEEISALKGQVGGQVSVEVDSAPGIDLAKILSDMRSQYE 850
            TDLE+QIE L EELAY+KKNHEEE+     QV GQV+VE+D+ PGIDL ++L++MR QYE
Sbjct: 223  TDLEMQIESLNEELAYMKKNHEEEMKEFSNQVVGQVNVEMDATPGIDLTRVLAEMREQYE 282

Query: 851  VMAEQNRKDAEAWFTSRTEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIELQSQLSMK 1030
             MAE+NR+DAE WF +++ ELN+EV+ +T  +Q SKTE+T+LRRTLQGLEIELQSQLSMK
Sbjct: 283  AMAERNRRDAEEWFHAKSAELNKEVSTNTAMIQTSKTEITELRRTLQGLEIELQSQLSMK 342

Query: 1031 XXXXXXXXXXXXRFGAQLAQIQ 1096
                        R+  QL QIQ
Sbjct: 343  AGLENTVAETECRYALQLQQIQ 364


>ref|NP_000214.1| keratin, type I cytoskeletal 12 [Homo sapiens].
          Length = 494

 Score =  325 bits (834), Expect = 3e-89
 Identities = 167/265 (63%), Positives = 210/265 (79%), Gaps = 4/265 (1%)
 Frame = +2

Query: 314  NEKLTMQNLNDRLASYLEKVRALEQANGDLEVKIRDWYQKQGPGPA----RDYSHYFKTI 481
            +EK TMQNLNDRLASYL+KVRALE+AN +LE KIR+WY+ +G G A     DYS Y+  I
Sbjct: 124  SEKETMQNLNDRLASYLDKVRALEEANTELENKIREWYETRGTGTADASQSDYSKYYPLI 183

Query: 482  EDLRDKILGATIENSKIVLQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVLDELT 661
            EDLR+KI+ A+I N++++LQIDNARLAA+DFR K+E E ALR  VEADINGLRRVLDELT
Sbjct: 184  EDLRNKIISASIGNAQLLLQIDNARLAAEDFRMKYENELALRQGVEADINGLRRVLDELT 243

Query: 662  LARTDLELQIEGLKEELAYLKKNHEEEISALKGQVGGQVSVEVDSAPGIDLAKILSDMRS 841
            L RTDLE+QIE L EELAY+KKNHE+E+ + +    G+VSVE+D+APG+DL ++L+DMR+
Sbjct: 244  LTRTDLEMQIESLNEELAYMKKNHEDELQSFRVGGPGEVSVEMDAAPGVDLTRLLNDMRA 303

Query: 842  QYEVMAEQNRKDAEAWFTSRTEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIELQSQL 1021
            QYE +AEQNRKDAEAWF  ++ EL +E++ +TEQLQ SK+EVTDLRR  Q LEIELQSQL
Sbjct: 304  QYETIAEQNRKDAEAWFIEKSGELRKEISTNTEQLQSSKSEVTDLRRAFQNLEIELQSQL 363

Query: 1022 SMKXXXXXXXXXXXXRFGAQLAQIQ 1096
            +MK             + AQL+Q+Q
Sbjct: 364  AMKKSLEDSLAEAEGDYCAQLSQVQ 388


>ref|NP_000412.3| keratin, type I cytoskeletal 10 [Homo sapiens].
          Length = 584

 Score =  319 bits (818), Expect = 2e-87
 Identities = 162/264 (61%), Positives = 207/264 (78%), Gaps = 3/264 (1%)
 Frame = +2

Query: 314  NEKLTMQNLNDRLASYLEKVRALEQANGDLEVKIRDWYQKQG---PGPARDYSHYFKTIE 484
            NEK+TMQNLNDRLASYL+KVRALE++N +LE KI++WY+K G    G  RDYS Y+KTI+
Sbjct: 145  NEKVTMQNLNDRLASYLDKVRALEESNYELEGKIKEWYEKHGNSHQGEPRDYSKYYKTID 204

Query: 485  DLRDKILGATIENSKIVLQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVLDELTL 664
            DL+++IL  T +N+ I+LQIDNARLAADDFR K+E E ALR SVEADINGLRRVLDELTL
Sbjct: 205  DLKNQILNLTTDNANILLQIDNARLAADDFRLKYENEVALRQSVEADINGLRRVLDELTL 264

Query: 665  ARTDLELQIEGLKEELAYLKKNHEEEISALKGQVGGQVSVEVDSAPGIDLAKILSDMRSQ 844
             + DLE+QIE L EELAYLKKNHEEE+  L+    G V+VE+++APG+DL ++L++MRSQ
Sbjct: 265  TKADLEMQIESLTEELAYLKKNHEEEMKDLRNVSTGDVNVEMNAAPGVDLTQLLNNMRSQ 324

Query: 845  YEVMAEQNRKDAEAWFTSRTEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIELQSQLS 1024
            YE +AEQNRKDAEAWF  +++EL  E+  + EQ+   K+E+T+LRR +Q LEIELQSQL+
Sbjct: 325  YEQLAEQNRKDAEAWFNEKSKELTTEIDNNIEQISSYKSEITELRRNVQALEIELQSQLA 384

Query: 1025 MKXXXXXXXXXXXXRFGAQLAQIQ 1096
            +K            R+  QL+QIQ
Sbjct: 385  LKQSLEASLAETEGRYCVQLSQIQ 408


>ref|NP_003762.1| keratin, type I cuticular Ha6 [Homo sapiens].
          Length = 467

 Score =  306 bits (785), Expect = 2e-83
 Identities = 156/261 (59%), Positives = 198/261 (75%)
 Frame = +2

Query: 314  NEKLTMQNLNDRLASYLEKVRALEQANGDLEVKIRDWYQKQGPGPARDYSHYFKTIEDLR 493
            +EK TMQ LNDRLA+YLEKVR LE+ N +LE +I++WY+ Q P    DY  YFKTIED +
Sbjct: 92   SEKETMQFLNDRLANYLEKVRQLERENAELESRIQEWYEFQIPYICPDYQSYFKTIEDFQ 151

Query: 494  DKILGATIENSKIVLQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVLDELTLART 673
             KIL    EN+++VLQIDNA+LAADDFRTK+ETE +LR  VEADINGLRR+LDELTL + 
Sbjct: 152  QKILLTKSENARLVLQIDNAKLAADDFRTKYETELSLRQLVEADINGLRRILDELTLCKA 211

Query: 674  DLELQIEGLKEELAYLKKNHEEEISALKGQVGGQVSVEVDSAPGIDLAKILSDMRSQYEV 853
            DLE Q+E LKEEL  LKKNHEEE+S L+ Q+G +++VEVD+AP +DL KIL DMR QYE 
Sbjct: 212  DLEAQVESLKEELMCLKKNHEEEVSVLRCQLGDRLNVEVDAAPPVDLNKILEDMRCQYEA 271

Query: 854  MAEQNRKDAEAWFTSRTEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIELQSQLSMKX 1033
            + E NR+D EAWF ++TEELN++V   +EQLQ  +TE+ +LRRT+  LEIELQ+Q SM+ 
Sbjct: 272  LVENNRRDVEAWFNTQTEELNQQVVSSSEQLQCCQTEIIELRRTVNALEIELQAQHSMRN 331

Query: 1034 XXXXXXXXXXXRFGAQLAQIQ 1096
                       R+ +QLAQ+Q
Sbjct: 332  SLESTLAETEARYSSQLAQMQ 352


  Database: RefSeq49_HP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,297,164
  Number of sequences in database:  32,964
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 34,367,595
Number of extensions: 935376
Number of successful extensions: 4914
Number of sequences better than 1.0e-05: 77
Number of HSP's gapped: 4727
Number of HSP's successfully gapped: 77
Length of query: 365
Length of database: 18,297,164
Length adjustment: 104
Effective length of query: 261
Effective length of database: 14,868,908
Effective search space: 3880784988
Effective search space used: 3880784988
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-001864
         (1096 letters)

Database: RefSeq49_MP.fasta 
           30,036 sequences; 15,617,559 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_032497.1| keratin, type I cytoskeletal 19 [Mus musculus].      429   e-120
Alignment   gi|NP_997648.2| keratin, type I cytoskeletal 42 [Mus musculus].      389   e-108
Alignment   gi|NP_034793.1| keratin, type I cytoskeletal 17 [Mus musculus].      382   e-106
Alignment   gi|NP_032495.2| keratin, type I cytoskeletal 15 [Mus musculus].      374   e-104
Alignment   gi|NP_058654.1| keratin, type I cytoskeletal 14 [Mus musculus].      372   e-103
Alignment   gi|NP_034792.1| keratin, type I cytoskeletal 13 [Mus musculus].      350   9e-97
Alignment   gi|NP_032496.1| keratin, type I cytoskeletal 16 [Mus musculus].      347   9e-96
Alignment   gi|NP_034791.2| keratin, type I cytoskeletal 12 [Mus musculus].      314   9e-86
Alignment   gi|NP_034790.2| keratin, type I cytoskeletal 10 [Mus musculus].      314   9e-86
Alignment   gi|NP_001167570.1| keratin, type I cuticular Ha6 [Mus musculus].     308   5e-84

>ref|NP_032497.1| keratin, type I cytoskeletal 19 [Mus musculus].
          Length = 403

 Score =  429 bits (1103), Expect = e-120
 Identities = 219/261 (83%), Positives = 239/261 (91%)
 Frame = +2

Query: 314  NEKLTMQNLNDRLASYLEKVRALEQANGDLEVKIRDWYQKQGPGPARDYSHYFKTIEDLR 493
            NEK+TMQNLNDRLASYL+KVRALEQANG+LEVKIRDWYQKQGPGP+RDY+HYFKTIEDLR
Sbjct: 82   NEKITMQNLNDRLASYLDKVRALEQANGELEVKIRDWYQKQGPGPSRDYNHYFKTIEDLR 141

Query: 494  DKILGATIENSKIVLQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVLDELTLART 673
            DKILGATI+NSKIVLQIDNARLAADDFRTKFETE ALRLSVEADINGLRRVLDELTLART
Sbjct: 142  DKILGATIDNSKIVLQIDNARLAADDFRTKFETEHALRLSVEADINGLRRVLDELTLART 201

Query: 674  DLELQIEGLKEELAYLKKNHEEEISALKGQVGGQVSVEVDSAPGIDLAKILSDMRSQYEV 853
            DLE+QIE LKEELAYLKKNHEEEI+AL+ QVGGQVSVEVDS PG+DLAKILS+MRSQYE+
Sbjct: 202  DLEMQIESLKEELAYLKKNHEEEITALRSQVGGQVSVEVDSTPGVDLAKILSEMRSQYEI 261

Query: 854  MAEQNRKDAEAWFTSRTEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIELQSQLSMKX 1033
            MAE+NRKDAEA + +R EELN +VA H+EQ+QISKTEVTDLRRTLQGLEIELQSQLSMK 
Sbjct: 262  MAEKNRKDAEATYLARIEELNTQVAVHSEQIQISKTEVTDLRRTLQGLEIELQSQLSMKA 321

Query: 1034 XXXXXXXXXXXRFGAQLAQIQ 1096
                       R+G QL+QIQ
Sbjct: 322  ALEGTLAETEARYGVQLSQIQ 342


>ref|NP_997648.2| keratin, type I cytoskeletal 42 [Mus musculus].
          Length = 452

 Score =  389 bits (999), Expect = e-108
 Identities = 195/261 (74%), Positives = 231/261 (88%)
 Frame = +2

Query: 314  NEKLTMQNLNDRLASYLEKVRALEQANGDLEVKIRDWYQKQGPGPARDYSHYFKTIEDLR 493
            +EK TMQNLNDRLA+YL++VRALE+AN DLEVKIR+WY+KQGPGPARDYS YFKTIEDLR
Sbjct: 93   SEKETMQNLNDRLATYLDRVRALEEANADLEVKIREWYKKQGPGPARDYSPYFKTIEDLR 152

Query: 494  DKILGATIENSKIVLQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVLDELTLART 673
            +KIL ATI+N+ IVLQIDNARLAADDFRTK+ETE  LR+SVEADINGLRRVLDELTLAR 
Sbjct: 153  NKILAATIDNASIVLQIDNARLAADDFRTKYETELNLRMSVEADINGLRRVLDELTLARA 212

Query: 674  DLELQIEGLKEELAYLKKNHEEEISALKGQVGGQVSVEVDSAPGIDLAKILSDMRSQYEV 853
            DLE+QIE LKEELAYL+KNHEEE++AL+GQVGG V+VE+D+APG+DL++IL++MR QYE 
Sbjct: 213  DLEMQIESLKEELAYLRKNHEEEMNALRGQVGGDVNVEMDAAPGVDLSRILNEMRDQYEK 272

Query: 854  MAEQNRKDAEAWFTSRTEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIELQSQLSMKX 1033
            MAE+NRKDAE WF ++TEELNREVA +TE LQ S+TE+T+LRR++Q LEIELQSQLSMK 
Sbjct: 273  MAEKNRKDAEEWFFTKTEELNREVATNTEALQSSRTEITELRRSVQNLEIELQSQLSMKA 332

Query: 1034 XXXXXXXXXXXRFGAQLAQIQ 1096
                       R+GAQLAQ+Q
Sbjct: 333  SLENSLAETEARYGAQLAQLQ 353


>ref|NP_034793.1| keratin, type I cytoskeletal 17 [Mus musculus].
          Length = 433

 Score =  382 bits (982), Expect = e-106
 Identities = 192/260 (73%), Positives = 228/260 (87%)
 Frame = +2

Query: 317  EKLTMQNLNDRLASYLEKVRALEQANGDLEVKIRDWYQKQGPGPARDYSHYFKTIEDLRD 496
            EK TMQNLNDRLASYL+KVRALE+AN +LEVKIRDWYQKQ PGPARDYS Y+ TIEDL++
Sbjct: 84   EKATMQNLNDRLASYLDKVRALEEANTELEVKIRDWYQKQAPGPARDYSAYYHTIEDLKN 143

Query: 497  KILGATIENSKIVLQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVLDELTLARTD 676
            KIL AT++N+ I+LQIDNARLAADDFRTKFETEQALR+SVEADINGLRRVLDELTLAR D
Sbjct: 144  KILVATVDNASILLQIDNARLAADDFRTKFETEQALRMSVEADINGLRRVLDELTLARAD 203

Query: 677  LELQIEGLKEELAYLKKNHEEEISALKGQVGGQVSVEVDSAPGIDLAKILSDMRSQYEVM 856
            LE+QIE LKEELAYLKKNHEEE++AL+GQVGG+++VE+D+APG+DL++ILS+MR QYE M
Sbjct: 204  LEMQIENLKEELAYLKKNHEEEMNALRGQVGGEINVEMDAAPGVDLSRILSEMRDQYEKM 263

Query: 857  AEQNRKDAEAWFTSRTEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIELQSQLSMKXX 1036
            AE+NRKDAE WF S+TEELNREVA ++E +Q  K+E+++LRRT+Q LEIELQSQLSMK  
Sbjct: 264  AEKNRKDAEDWFFSKTEELNREVATNSELVQSGKSEISELRRTMQALEIELQSQLSMKAS 323

Query: 1037 XXXXXXXXXXRFGAQLAQIQ 1096
                      R+  QL+QIQ
Sbjct: 324  LEGSLAETENRYCVQLSQIQ 343


>ref|NP_032495.2| keratin, type I cytoskeletal 15 [Mus musculus].
          Length = 456

 Score =  374 bits (959), Expect = e-104
 Identities = 188/262 (71%), Positives = 219/262 (83%), Gaps = 1/262 (0%)
 Frame = +2

Query: 314  NEKLTMQNLNDRLASYLEKVRALEQANGDLEVKIRDWYQKQGPG-PARDYSHYFKTIEDL 490
            NEK+TMQNLNDRLASYL+KVRALEQAN +LEVKIRDWYQKQ P  P RDYSHYFKT+E++
Sbjct: 97   NEKVTMQNLNDRLASYLDKVRALEQANTELEVKIRDWYQKQSPASPDRDYSHYFKTMEEI 156

Query: 491  RDKILGATIENSKIVLQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVLDELTLAR 670
            RDKIL ATI+NS++VL+IDNARLAADDFR K+E E  LR  VEADINGLRRVLDELTLAR
Sbjct: 157  RDKILAATIDNSRVVLEIDNARLAADDFRLKYENELTLRQGVEADINGLRRVLDELTLAR 216

Query: 671  TDLELQIEGLKEELAYLKKNHEEEISALKGQVGGQVSVEVDSAPGIDLAKILSDMRSQYE 850
            TDLE+QIE L EELAYLKKNHEEE+     Q+ GQV+VE+D+APG+DL ++L++MR QYE
Sbjct: 217  TDLEMQIEQLNEELAYLKKNHEEEMKEFSSQLAGQVNVEMDAAPGVDLTRMLAEMREQYE 276

Query: 851  VMAEQNRKDAEAWFTSRTEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIELQSQLSMK 1030
             +AE+NR+D EAWF S+TEELN+EVA +TE +Q SKTE+TDLRRTLQGLEIELQSQLSMK
Sbjct: 277  AIAEKNRRDVEAWFFSKTEELNKEVASNTEMIQTSKTEITDLRRTLQGLEIELQSQLSMK 336

Query: 1031 XXXXXXXXXXXXRFGAQLAQIQ 1096
                        R+  QL QIQ
Sbjct: 337  AGLENSLAEVECRYATQLQQIQ 358


>ref|NP_058654.1| keratin, type I cytoskeletal 14 [Mus musculus].
          Length = 484

 Score =  372 bits (954), Expect = e-103
 Identities = 185/261 (70%), Positives = 226/261 (86%)
 Frame = +2

Query: 314  NEKLTMQNLNDRLASYLEKVRALEQANGDLEVKIRDWYQKQGPGPARDYSHYFKTIEDLR 493
            +EK+TMQNLNDRLA+YL+KVRALE+AN +LEVKIRDWYQ+Q P   +DYS YFKTIEDL+
Sbjct: 120  SEKVTMQNLNDRLATYLDKVRALEEANTELEVKIRDWYQRQRPTEIKDYSPYFKTIEDLK 179

Query: 494  DKILGATIENSKIVLQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVLDELTLART 673
             KIL AT++N+ ++LQIDNARLAADDFRTKFETEQ+LR+SVEADINGLRRVLDELTLAR 
Sbjct: 180  SKILAATVDNANVLLQIDNARLAADDFRTKFETEQSLRMSVEADINGLRRVLDELTLARA 239

Query: 674  DLELQIEGLKEELAYLKKNHEEEISALKGQVGGQVSVEVDSAPGIDLAKILSDMRSQYEV 853
            DLE+QIE LKEELAYLKKNHEEE+++++GQVGG V+VE+D+APG+DL++IL++MR QYE 
Sbjct: 240  DLEMQIESLKEELAYLKKNHEEEMASMRGQVGGDVNVEMDAAPGVDLSRILNEMRDQYEK 299

Query: 854  MAEQNRKDAEAWFTSRTEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIELQSQLSMKX 1033
            MAE+NRKDAE WF S+TEELNREVA ++E +Q  K+E+++LRRT+Q LEIELQSQLSMK 
Sbjct: 300  MAEKNRKDAEEWFFSKTEELNREVATNSELVQSGKSEISELRRTMQNLEIELQSQLSMKA 359

Query: 1034 XXXXXXXXXXXRFGAQLAQIQ 1096
                       R+  QLAQIQ
Sbjct: 360  SLENNLEETKGRYCMQLAQIQ 380


>ref|NP_034792.1| keratin, type I cytoskeletal 13 [Mus musculus].
          Length = 437

 Score =  350 bits (899), Expect = 9e-97
 Identities = 178/262 (67%), Positives = 212/262 (80%), Gaps = 1/262 (0%)
 Frame = +2

Query: 314  NEKLTMQNLNDRLASYLEKVRALEQANGDLEVKIRDWYQKQGPG-PARDYSHYFKTIEDL 490
            NEK+TMQNLNDRLASYL+KVRALE AN DLEVKIRDW+ KQ P  P RDYS Y+KTIE+L
Sbjct: 95   NEKITMQNLNDRLASYLDKVRALEAANADLEVKIRDWHLKQSPASPERDYSAYYKTIEEL 154

Query: 491  RDKILGATIENSKIVLQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVLDELTLAR 670
            R KIL AT +N++I+L+IDNARLAADDFR K+E E  LR SVEADINGLRRVLDELTLA+
Sbjct: 155  RIKILEATTDNNRIILEIDNARLAADDFRLKYENELTLRQSVEADINGLRRVLDELTLAK 214

Query: 671  TDLELQIEGLKEELAYLKKNHEEEISALKGQVGGQVSVEVDSAPGIDLAKILSDMRSQYE 850
            TDLE+QIE L EELAYLKKNHEEE+     QV GQV+VE+D+ PGIDL ++L++MR QYE
Sbjct: 215  TDLEMQIESLNEELAYLKKNHEEEMKEFSNQVVGQVNVEMDATPGIDLTRVLAEMREQYE 274

Query: 851  VMAEQNRKDAEAWFTSRTEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIELQSQLSMK 1030
             +AE+NR+DAE WF +++ ELN+EV+ + E +Q SKTE+T+LRRTLQGLEIELQSQLSMK
Sbjct: 275  ALAEKNRRDAEEWFQTKSAELNKEVSSNAEMIQTSKTEITELRRTLQGLEIELQSQLSMK 334

Query: 1031 XXXXXXXXXXXXRFGAQLAQIQ 1096
                        R+  QL QIQ
Sbjct: 335  AGLESTLAETECRYALQLQQIQ 356


>ref|NP_032496.1| keratin, type I cytoskeletal 16 [Mus musculus].
          Length = 469

 Score =  347 bits (890), Expect = 9e-96
 Identities = 174/261 (66%), Positives = 215/261 (82%)
 Frame = +2

Query: 314  NEKLTMQNLNDRLASYLEKVRALEQANGDLEVKIRDWYQKQGPGPARDYSHYFKTIEDLR 493
            +EK+TMQNLNDRLA+YL+KVRALE+AN DLEVKIRDWYQ+Q P   +DYS YFKTIEDL+
Sbjct: 112  SEKVTMQNLNDRLATYLDKVRALEEANRDLEVKIRDWYQRQRPTEIKDYSPYFKTIEDLK 171

Query: 494  DKILGATIENSKIVLQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVLDELTLART 673
             KI+ AT EN++  LQIDNARLAADDFRTK+E E  LR SVE DINGLR+VLDELTL+R 
Sbjct: 172  SKIIIATQENAQFTLQIDNARLAADDFRTKYENELFLRQSVEGDINGLRKVLDELTLSRA 231

Query: 674  DLELQIEGLKEELAYLKKNHEEEISALKGQVGGQVSVEVDSAPGIDLAKILSDMRSQYEV 853
            DLE+QIE L+EELA+LKKNHEEE+ AL+GQ GG V+VE+D+APG+DL++IL++MR QYE 
Sbjct: 232  DLEMQIENLREELAFLKKNHEEEMLALRGQTGGDVNVEMDAAPGVDLSRILNEMRDQYEQ 291

Query: 854  MAEQNRKDAEAWFTSRTEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIELQSQLSMKX 1033
            MAE+NR+D EAWF  +TEELN+EVA +++ +Q +++EV +LRR  QGLEIELQSQLSMK 
Sbjct: 292  MAEKNRRDVEAWFLRKTEELNKEVASNSDLIQSNRSEVAELRRVFQGLEIELQSQLSMKA 351

Query: 1034 XXXXXXXXXXXRFGAQLAQIQ 1096
                       R+  QL+QIQ
Sbjct: 352  SLENSLEETKGRYCMQLSQIQ 372


>ref|NP_034791.2| keratin, type I cytoskeletal 12 [Mus musculus].
          Length = 487

 Score =  314 bits (804), Expect = 9e-86
 Identities = 159/264 (60%), Positives = 205/264 (77%), Gaps = 3/264 (1%)
 Frame = +2

Query: 314  NEKLTMQNLNDRLASYLEKVRALEQANGDLEVKIRDWYQKQ---GPGPARDYSHYFKTIE 484
            +EK TMQNLNDRLASYL KVR+LE+AN +LE KIR+WY+ +     G   DYS Y+  IE
Sbjct: 118  SEKETMQNLNDRLASYLGKVRSLEEANAELENKIREWYETRRTRDAGSQSDYSKYYPLIE 177

Query: 485  DLRDKILGATIENSKIVLQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVLDELTL 664
            DL++KI+ A + N++++LQIDNARLAA+DFR K+E E ALR +VEADINGLRRVLDELTL
Sbjct: 178  DLKNKIVSARVSNAQLLLQIDNARLAAEDFRMKYENELALRQTVEADINGLRRVLDELTL 237

Query: 665  ARTDLELQIEGLKEELAYLKKNHEEEISALKGQVGGQVSVEVDSAPGIDLAKILSDMRSQ 844
             R DLE Q+E L EELAY+KKNHEEE+ + +    G+V+VE+D+APG+DL K+L++MR+Q
Sbjct: 238  TRADLEAQLETLTEELAYMKKNHEEELQSFQAGGPGEVNVEMDAAPGVDLTKVLNEMRAQ 297

Query: 845  YEVMAEQNRKDAEAWFTSRTEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIELQSQLS 1024
            YE MAEQNRKDAEAWF  ++ EL +E++ +TEQLQ SK+EVTDL+R +Q LEIELQSQL+
Sbjct: 298  YEAMAEQNRKDAEAWFLEKSRELRKEISSNTEQLQSSKSEVTDLKRMVQNLEIELQSQLA 357

Query: 1025 MKXXXXXXXXXXXXRFGAQLAQIQ 1096
            MK             +  QL+Q+Q
Sbjct: 358  MKSSLEGSLAETEGGYCCQLSQVQ 381


>ref|NP_034790.2| keratin, type I cytoskeletal 10 [Mus musculus].
          Length = 561

 Score =  314 bits (804), Expect = 9e-86
 Identities = 158/264 (59%), Positives = 207/264 (78%), Gaps = 3/264 (1%)
 Frame = +2

Query: 314  NEKLTMQNLNDRLASYLEKVRALEQANGDLEVKIRDWYQKQGPGPAR---DYSHYFKTIE 484
            NEK+TMQNLNDRLASY++KVRALE++N +LE KI++WY+K G    R   DYS Y+KTIE
Sbjct: 134  NEKVTMQNLNDRLASYMDKVRALEESNYELEGKIKEWYEKHGNSSQREPRDYSKYYKTIE 193

Query: 485  DLRDKILGATIENSKIVLQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVLDELTL 664
            DL+ +IL  T +N+ ++LQIDNARLAADDFR K+E E  LR SVEADINGLRRVLDELTL
Sbjct: 194  DLKGQILTLTTDNANVLLQIDNARLAADDFRLKYENEVTLRQSVEADINGLRRVLDELTL 253

Query: 665  ARTDLELQIEGLKEELAYLKKNHEEEISALKGQVGGQVSVEVDSAPGIDLAKILSDMRSQ 844
            +++DLE+QIE L EELAYLKKNHEEE+  L+    G V+VE+++APG+DL ++L++MR+Q
Sbjct: 254  SKSDLEMQIESLNEELAYLKKNHEEEMRDLQNVSTGDVNVEMNAAPGVDLTQLLNNMRNQ 313

Query: 845  YEVMAEQNRKDAEAWFTSRTEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIELQSQLS 1024
            YE +AE+NRKDAE WF  +++EL  E+  + EQ+   K+E+T+LRRT+QGLEIELQSQL+
Sbjct: 314  YEQLAEKNRKDAEEWFNQKSKELTTEIDSNIEQMSSHKSEITELRRTVQGLEIELQSQLA 373

Query: 1025 MKXXXXXXXXXXXXRFGAQLAQIQ 1096
            +K            R+  QL+QIQ
Sbjct: 374  LKQSLEASLAETEGRYCVQLSQIQ 397


>ref|NP_001167570.1| keratin, type I cuticular Ha6 [Mus musculus].
          Length = 473

 Score =  308 bits (789), Expect = 5e-84
 Identities = 155/261 (59%), Positives = 197/261 (75%)
 Frame = +2

Query: 314  NEKLTMQNLNDRLASYLEKVRALEQANGDLEVKIRDWYQKQGPGPARDYSHYFKTIEDLR 493
            NEK TMQ LNDRLA+YLEKVR LEQ N  LE +IR+WY+ Q P    DY  YFKT E+L+
Sbjct: 92   NEKATMQILNDRLANYLEKVRQLEQENTQLECRIREWYECQIPYICPDYQSYFKTAEELQ 151

Query: 494  DKILGATIENSKIVLQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVLDELTLART 673
             KIL    EN++++LQIDNA+LAADDFRTK+ETE +LR  VEADINGLRR+LDELTL + 
Sbjct: 152  QKILLTKSENARLILQIDNAKLAADDFRTKYETELSLRQLVEADINGLRRILDELTLCKA 211

Query: 674  DLELQIEGLKEELAYLKKNHEEEISALKGQVGGQVSVEVDSAPGIDLAKILSDMRSQYEV 853
            DLE Q+E LKEEL  LK+NHEEE++AL+ Q+G +++VEVD+AP +DL KIL DMR QYE 
Sbjct: 212  DLEAQVESLKEELLCLKRNHEEEVNALRSQLGDRLNVEVDAAPPVDLNKILDDMRCQYET 271

Query: 854  MAEQNRKDAEAWFTSRTEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIELQSQLSMKX 1033
            + E NR+D EAWF ++TEELN++V   +EQLQ  +TE+ +LRRT+  LEIELQ+Q SM+ 
Sbjct: 272  LVENNRRDVEAWFNTQTEELNQQVVSSSEQLQCCQTEIIELRRTVNSLEIELQAQQSMRN 331

Query: 1034 XXXXXXXXXXXRFGAQLAQIQ 1096
                       R+ +QL Q+Q
Sbjct: 332  SLESTLAETEARYSSQLGQMQ 352


  Database: RefSeq49_MP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 15,617,559
  Number of sequences in database:  30,036
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 28,727,930
Number of extensions: 763013
Number of successful extensions: 3685
Number of sequences better than 1.0e-05: 80
Number of HSP's gapped: 3475
Number of HSP's successfully gapped: 80
Length of query: 365
Length of database: 15,617,559
Length adjustment: 103
Effective length of query: 262
Effective length of database: 12,523,851
Effective search space: 3281248962
Effective search space used: 3281248962
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-001864
         (1096 letters)

Database: RefSeq49_SP.fasta 
           24,897 sequences; 11,343,932 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_003131485.1| PREDICTED: keratin, type I cytoskeletal 19-l...   476   e-134
Alignment   gi|XP_003131486.1| PREDICTED: keratin, type I cytoskeletal 15-l...   365   e-101
Alignment   gi|XP_003131484.1| PREDICTED: keratin, type I cytoskeletal 13-l...   353   9e-98
Alignment   gi|XP_003131509.1| PREDICTED: keratin, type I cytoskeletal 12 [...   323   8e-89
Alignment   gi|XP_003131508.1| PREDICTED: keratin, type I cytoskeletal 10-l...   319   2e-87
Alignment   gi|XP_003131480.2| PREDICTED: keratin, type I cuticular Ha6 iso...   305   4e-83
Alignment   gi|XP_003131482.2| PREDICTED: keratin, type I cuticular Ha5-lik...   290   7e-79
Alignment   gi|XP_003131481.1| PREDICTED: keratin, type I cuticular Ha2 [Su...   288   4e-78
Alignment   gi|XP_003131477.1| PREDICTED: keratin, type I microfibrillar 48...   286   1e-77
Alignment   gi|XP_003131478.1| PREDICTED: LOW QUALITY PROTEIN: keratin, typ...   283   2e-76

>ref|XP_003131485.1| PREDICTED: keratin, type I cytoskeletal 19-like [Sus scrofa].
          Length = 404

 Score =  476 bits (1225), Expect = e-134
 Identities = 249/261 (95%), Positives = 249/261 (95%)
 Frame = +2

Query: 314  NEKLTMQNLNDRLASYLEKVRALEQANGDLEVKIRDWYQKQGPGPARDYSHYFKTIEDLR 493
            NEKLTMQNLNDRLASYLEKVRALEQANGDLEVKIRDWYQKQGPGPARDYSHYFKTIEDLR
Sbjct: 83   NEKLTMQNLNDRLASYLEKVRALEQANGDLEVKIRDWYQKQGPGPARDYSHYFKTIEDLR 142

Query: 494  DKILGATIENSKIVLQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVLDELTLART 673
            DKILGATIENSKIVLQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVLDELTLART
Sbjct: 143  DKILGATIENSKIVLQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVLDELTLART 202

Query: 674  DLELQIEGLKEELAYLKKNHEEEISALKGQVGGQVSVEVDSAPGIDLAKILSDMRSQYEV 853
            DLELQIEGLKEELAYLKKNHEEEISALKGQVGGQVSVEVDSAPGIDLAKILSDMRSQYEV
Sbjct: 203  DLELQIEGLKEELAYLKKNHEEEISALKGQVGGQVSVEVDSAPGIDLAKILSDMRSQYEV 262

Query: 854  MAEQNRKDAEAWFTSRTEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIELQSQLSMKX 1033
            MAEQNRKDAEAWFTSRTEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIELQSQLSMK 
Sbjct: 263  MAEQNRKDAEAWFTSRTEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIELQSQLSMKA 322

Query: 1034 XXXXXXXXXXXRFGAQLAQIQ 1096
                       RFGAQLAQIQ
Sbjct: 323  ALEGTLAETEARFGAQLAQIQ 343


>ref|XP_003131486.1| PREDICTED: keratin, type I cytoskeletal 15-like [Sus scrofa].
          Length = 460

 Score =  365 bits (937), Expect = e-101
 Identities = 182/262 (69%), Positives = 216/262 (82%), Gaps = 1/262 (0%)
 Frame = +2

Query: 314  NEKLTMQNLNDRLASYLEKVRALEQANGDLEVKIRDWYQKQGPG-PARDYSHYFKTIEDL 490
            NEK+TMQNLNDRLASYL+KVRALE+AN DLEVKI DWY+KQ P  P RDYS YFKT+E+L
Sbjct: 110  NEKITMQNLNDRLASYLDKVRALEEANADLEVKIHDWYKKQSPSSPERDYSPYFKTMEEL 169

Query: 491  RDKILGATIENSKIVLQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVLDELTLAR 670
            RDKI  A I+NS+++L+IDNARLAADDFR K+E E ALR  VEADINGLRRVLDELTL +
Sbjct: 170  RDKIRAAAIDNSRVILEIDNARLAADDFRLKYENELALRQGVEADINGLRRVLDELTLTK 229

Query: 671  TDLELQIEGLKEELAYLKKNHEEEISALKGQVGGQVSVEVDSAPGIDLAKILSDMRSQYE 850
            TDLE+QIE L EELAYLKKNHEEE+     Q+ GQV+VE+D+APG+DL ++L++MR QYE
Sbjct: 230  TDLEMQIESLNEELAYLKKNHEEEMKEFSNQLAGQVNVEMDAAPGVDLTRVLAEMREQYE 289

Query: 851  VMAEQNRKDAEAWFTSRTEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIELQSQLSMK 1030
             +AE+NR+DAEAWF S+TEELN+EVA +TE +Q SKTE+TDLRRT+QGLEIELQSQLSMK
Sbjct: 290  AIAEKNRRDAEAWFFSKTEELNKEVASNTEMIQTSKTEITDLRRTVQGLEIELQSQLSMK 349

Query: 1031 XXXXXXXXXXXXRFGAQLAQIQ 1096
                        R+  QL QIQ
Sbjct: 350  AGLESSLAETECRYATQLQQIQ 371


>ref|XP_003131484.1| PREDICTED: keratin, type I cytoskeletal 13-like [Sus scrofa].
          Length = 454

 Score =  353 bits (906), Expect = 9e-98
 Identities = 180/262 (68%), Positives = 209/262 (79%), Gaps = 1/262 (0%)
 Frame = +2

Query: 314  NEKLTMQNLNDRLASYLEKVRALEQANGDLEVKIRDWYQKQGPG-PARDYSHYFKTIEDL 490
            NEK+TMQNLNDRLASYLEKVRALE+AN DLEVKIRDWYQKQ P  P RDYS YFKTIE+L
Sbjct: 101  NEKITMQNLNDRLASYLEKVRALEEANTDLEVKIRDWYQKQSPSSPERDYSPYFKTIEEL 160

Query: 491  RDKILGATIENSKIVLQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVLDELTLAR 670
            RDKI  A IEN+++VLQIDNARLAADDFR K+E E  LR SVEADINGLRRVLDELTL +
Sbjct: 161  RDKIQAANIENNRVVLQIDNARLAADDFRLKYENELTLRQSVEADINGLRRVLDELTLTK 220

Query: 671  TDLELQIEGLKEELAYLKKNHEEEISALKGQVGGQVSVEVDSAPGIDLAKILSDMRSQYE 850
            TDLE+QIE L EELA+LKKNHEEE+     +V GQV+VE+D+ PG+DL ++L++MR QYE
Sbjct: 221  TDLEMQIESLNEELAFLKKNHEEEMKEFSNRVVGQVNVEMDATPGVDLTRVLAEMREQYE 280

Query: 851  VMAEQNRKDAEAWFTSRTEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIELQSQLSMK 1030
             MAE+NR++AE WF  + EELN+EV   T  +Q SKTE+T+LRRTLQGLEIELQSQLS K
Sbjct: 281  AMAEKNRREAEEWFNKKIEELNKEVISSTALIQTSKTEITELRRTLQGLEIELQSQLSTK 340

Query: 1031 XXXXXXXXXXXXRFGAQLAQIQ 1096
                        R+  QL QIQ
Sbjct: 341  AGLENSLAETECRYALQLQQIQ 362


>ref|XP_003131509.1| PREDICTED: keratin, type I cytoskeletal 12 [Sus scrofa].
          Length = 494

 Score =  323 bits (829), Expect = 8e-89
 Identities = 168/266 (63%), Positives = 208/266 (78%), Gaps = 5/266 (1%)
 Frame = +2

Query: 314  NEKLTMQNLNDRLASYLEKVRALEQANGDLEVKIRDWYQKQGPGPA-----RDYSHYFKT 478
            +EK TM+NLNDRLASYL+KVRALE+AN DLE KIR+WY+ +G G        DYS YF  
Sbjct: 123  SEKETMKNLNDRLASYLDKVRALEEANTDLENKIREWYETRGSGTGDPRSQSDYSKYFPL 182

Query: 479  IEDLRDKILGATIENSKIVLQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVLDEL 658
            IE+L++KI+ A+I N++++LQIDNARLAA+DFR K+E E AL  +VEADINGLRRVLDEL
Sbjct: 183  IEELKNKIISASIANAQLILQIDNARLAAEDFRMKYENEVALCQNVEADINGLRRVLDEL 242

Query: 659  TLARTDLELQIEGLKEELAYLKKNHEEEISALKGQVGGQVSVEVDSAPGIDLAKILSDMR 838
            TL R DLE QIE L EELAYLKKNHEEE+ + +    GQVSVE+D+APG+DL K+L+DMR
Sbjct: 243  TLVRADLETQIETLNEELAYLKKNHEEELQSFRAGGPGQVSVEMDAAPGVDLTKLLNDMR 302

Query: 839  SQYEVMAEQNRKDAEAWFTSRTEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIELQSQ 1018
            +QYE +AEQNRKDAEAWF  ++ EL +E++ +TEQLQ SK+EVTDLRR LQ LEIELQSQ
Sbjct: 303  AQYEAIAEQNRKDAEAWFIEKSGELRKEISTNTEQLQSSKSEVTDLRRALQNLEIELQSQ 362

Query: 1019 LSMKXXXXXXXXXXXXRFGAQLAQIQ 1096
            L+MK             + AQL+Q+Q
Sbjct: 363  LAMKKSLEDSLAETEGDYCAQLSQVQ 388


>ref|XP_003131508.1| PREDICTED: keratin, type I cytoskeletal 10-like [Sus scrofa].
          Length = 613

 Score =  319 bits (817), Expect = 2e-87
 Identities = 161/264 (60%), Positives = 207/264 (78%), Gaps = 3/264 (1%)
 Frame = +2

Query: 314  NEKLTMQNLNDRLASYLEKVRALEQANGDLEVKIRDWYQKQGP---GPARDYSHYFKTIE 484
            NEK+TMQNLNDRLASYL+KVRALE +N +LEVKI++WY K G       RDYS Y+K IE
Sbjct: 157  NEKVTMQNLNDRLASYLDKVRALEDSNYELEVKIKEWYDKHGNVGRREPRDYSKYYKIIE 216

Query: 485  DLRDKILGATIENSKIVLQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVLDELTL 664
            DL+++I+  T++N+ I++Q+DNARLAADDFR K+E E  LR SVEADINGLRRVLDELTL
Sbjct: 217  DLKNQIINLTVDNANILIQVDNARLAADDFRMKYENEVTLRQSVEADINGLRRVLDELTL 276

Query: 665  ARTDLELQIEGLKEELAYLKKNHEEEISALKGQVGGQVSVEVDSAPGIDLAKILSDMRSQ 844
             +TDLE+QIE L EELAYLKKNHEEE+  L+    G V+VE+++APG+DL ++L++MRSQ
Sbjct: 277  TKTDLEMQIESLNEELAYLKKNHEEEMRDLQNVSTGDVNVEMNAAPGVDLTELLNNMRSQ 336

Query: 845  YEVMAEQNRKDAEAWFTSRTEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIELQSQLS 1024
            YE +AEQNR+DAEAWF  +++EL  E+  + EQ+   K+E+T+LRRT+QGLEIELQSQL+
Sbjct: 337  YEQLAEQNRRDAEAWFNEKSKELTTEINTNIEQVSSYKSEITELRRTIQGLEIELQSQLA 396

Query: 1025 MKXXXXXXXXXXXXRFGAQLAQIQ 1096
            +K            R+  QLAQIQ
Sbjct: 397  LKQSLEASLAETEGRYCVQLAQIQ 420


>ref|XP_003131480.2| PREDICTED: keratin, type I cuticular Ha6 isoform 2 [Sus scrofa].
          Length = 459

 Score =  305 bits (780), Expect = 4e-83
 Identities = 153/261 (58%), Positives = 197/261 (75%)
 Frame = +2

Query: 314  NEKLTMQNLNDRLASYLEKVRALEQANGDLEVKIRDWYQKQGPGPARDYSHYFKTIEDLR 493
            NEK TMQ LNDRLA+YLEKVR LE+ N +LE +IR+WY+ Q P    DY  YFKTIE+L+
Sbjct: 92   NEKETMQFLNDRLANYLEKVRQLERDNAELESRIREWYESQIPYICPDYQAYFKTIEELQ 151

Query: 494  DKILGATIENSKIVLQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVLDELTLART 673
             KIL    +N+++VLQIDNA+LAADDFRTK+ETE  +R  VEAD NGLRR+LDELTL + 
Sbjct: 152  QKILITKADNARLVLQIDNAKLAADDFRTKYETELGMRQLVEADTNGLRRILDELTLCKA 211

Query: 674  DLELQIEGLKEELAYLKKNHEEEISALKGQVGGQVSVEVDSAPGIDLAKILSDMRSQYEV 853
            DLE+Q+E LKEEL  LKKNHEEE++ L+ Q+G +++VEVD+AP +DL KIL DMR QYE 
Sbjct: 212  DLEMQVESLKEELICLKKNHEEEVNTLRCQLGDRLNVEVDAAPPVDLNKILDDMRCQYEA 271

Query: 854  MAEQNRKDAEAWFTSRTEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIELQSQLSMKX 1033
            + E NR+D EAWF ++TEELN++V   +EQLQ  +TE+ +LRR +  LEIELQ+Q SM+ 
Sbjct: 272  LVENNRRDVEAWFNTQTEELNQQVVSSSEQLQCCQTEIIELRRNVNALEIELQAQHSMRN 331

Query: 1034 XXXXXXXXXXXRFGAQLAQIQ 1096
                       R+ +QLAQ+Q
Sbjct: 332  SLEATLAETEARYSSQLAQMQ 352


>ref|XP_003131482.2| PREDICTED: keratin, type I cuticular Ha5-like [Sus scrofa].
          Length = 493

 Score =  290 bits (743), Expect = 7e-79
 Identities = 143/261 (54%), Positives = 198/261 (75%)
 Frame = +2

Query: 314  NEKLTMQNLNDRLASYLEKVRALEQANGDLEVKIRDWYQKQGPGPARDYSHYFKTIEDLR 493
            NEK TMQ+LNDRLASYLEKVR LE+ N +LE +IR+W ++Q P    DY  YF+TIE+L+
Sbjct: 134  NEKETMQSLNDRLASYLEKVRRLERENSELEGRIREWCEQQEPYLCPDYQSYFQTIEELQ 193

Query: 494  DKILGATIENSKIVLQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVLDELTLART 673
             K L    EN+++V+QIDNA+LAADDFR+K+ETE ++R  VE+D+NGLRR+LD+LTL + 
Sbjct: 194  KKTLCTKAENARLVVQIDNAKLAADDFRSKYETEVSMRQLVESDMNGLRRILDDLTLCKA 253

Query: 674  DLELQIEGLKEELAYLKKNHEEEISALKGQVGGQVSVEVDSAPGIDLAKILSDMRSQYEV 853
            DLE Q+E LKEEL  LKKNHEEE+++L+ Q+G +++VEVD+AP +DL ++L +MR QYE 
Sbjct: 254  DLEAQVESLKEELLCLKKNHEEEVNSLRCQLGDRLNVEVDAAPPVDLNRVLDEMRCQYET 313

Query: 854  MAEQNRKDAEAWFTSRTEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIELQSQLSMKX 1033
            + E NR+DAE WF ++TEELN++V   +EQLQ  + ++ +LRR +  LEIELQ+Q SM+ 
Sbjct: 314  LVENNRRDAEDWFNTQTEELNQQVVTSSEQLQSCQADIMELRRNVNALEIELQAQHSMRD 373

Query: 1034 XXXXXXXXXXXRFGAQLAQIQ 1096
                       R+ +QLAQ+Q
Sbjct: 374  ALESTLAETEARYSSQLAQMQ 394


>ref|XP_003131481.1| PREDICTED: keratin, type I cuticular Ha2 [Sus scrofa].
          Length = 460

 Score =  288 bits (737), Expect = 4e-78
 Identities = 145/261 (55%), Positives = 194/261 (74%)
 Frame = +2

Query: 314  NEKLTMQNLNDRLASYLEKVRALEQANGDLEVKIRDWYQKQGPGPARDYSHYFKTIEDLR 493
            NEK T+Q LNDRLA YLEKVR LEQ N +LE KI++  Q Q P  + +Y  YF+TIE+L+
Sbjct: 107  NEKETLQFLNDRLAKYLEKVRQLEQDNAELESKIQEASQSQVPTLSSNYHSYFRTIEELQ 166

Query: 494  DKILGATIENSKIVLQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVLDELTLART 673
             KIL    EN++ ++ +DNA+LAADDFRTK+ETE A+R  VEAD NGLRR+LDELTL + 
Sbjct: 167  QKILCTRAENARTIVHMDNAKLAADDFRTKYETELAMRQLVEADTNGLRRILDELTLCKA 226

Query: 674  DLELQIEGLKEELAYLKKNHEEEISALKGQVGGQVSVEVDSAPGIDLAKILSDMRSQYEV 853
            DLE+Q+E LKEEL  LKKNHEEE+ AL+GQ+G ++++EVD+AP +DL ++L +MR QYE 
Sbjct: 227  DLEMQVESLKEELMCLKKNHEEEVGALQGQLGDRLNIEVDAAPPVDLNRVLEEMRCQYEA 286

Query: 854  MAEQNRKDAEAWFTSRTEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIELQSQLSMKX 1033
            + E NR+D E WFT + EELN++VA  +EQLQ  +++  DLRRT+  LEIELQ+Q S++ 
Sbjct: 287  LVESNRRDVEEWFTMQMEELNQQVATSSEQLQSYQSDAIDLRRTVNMLEIELQAQHSLRD 346

Query: 1034 XXXXXXXXXXXRFGAQLAQIQ 1096
                       R+ +QLAQ+Q
Sbjct: 347  SLENTLTETEARYSSQLAQVQ 367


>ref|XP_003131477.1| PREDICTED: keratin, type I microfibrillar 48 kDa, component 8C-1-like
            [Sus scrofa].
          Length = 414

 Score =  286 bits (732), Expect = 1e-77
 Identities = 143/261 (54%), Positives = 195/261 (74%)
 Frame = +2

Query: 314  NEKLTMQNLNDRLASYLEKVRALEQANGDLEVKIRDWYQKQGPGPARDYSHYFKTIEDLR 493
            NEK TMQ LNDRLASYLEKVR LE+ N +LE +I++  Q+Q P    +Y  YF+TIE+L+
Sbjct: 55   NEKETMQFLNDRLASYLEKVRQLERDNAELERQIQERSQQQEPLVCPNYQSYFRTIEELQ 114

Query: 494  DKILGATIENSKIVLQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVLDELTLART 673
             KIL +  EN+++V+QIDNA+LAADDFRTK+ETE  LR  VE+DINGLRR+LDELTL + 
Sbjct: 115  QKILCSKSENARLVVQIDNAKLAADDFRTKYETELGLRQLVESDINGLRRILDELTLCKA 174

Query: 674  DLELQIEGLKEELAYLKKNHEEEISALKGQVGGQVSVEVDSAPGIDLAKILSDMRSQYEV 853
            DLE Q+E LKEEL  LK NHEEE+++L+ Q+G ++++EVD+AP +DL  +LS+ RSQYE 
Sbjct: 175  DLEAQVESLKEELLCLKSNHEEEVNSLRSQLGDRLNIEVDAAPTVDLNSVLSETRSQYEA 234

Query: 854  MAEQNRKDAEAWFTSRTEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIELQSQLSMKX 1033
            + E NR+D E WF  +TEELN++V   +EQLQ  + E+ +LRRT+  LE+ELQ+Q +++ 
Sbjct: 235  LVETNRRDVEEWFARQTEELNKQVVSSSEQLQSYQAEIIELRRTVNALEVELQAQHNLRD 294

Query: 1034 XXXXXXXXXXXRFGAQLAQIQ 1096
                       R+ +QLAQ+Q
Sbjct: 295  SLENTLTETEARYSSQLAQVQ 315


>ref|XP_003131478.1| PREDICTED: LOW QUALITY PROTEIN: keratin, type I cuticular Ha4-like
            [Sus scrofa].
          Length = 435

 Score =  283 bits (723), Expect = 2e-76
 Identities = 139/261 (53%), Positives = 195/261 (74%)
 Frame = +2

Query: 314  NEKLTMQNLNDRLASYLEKVRALEQANGDLEVKIRDWYQKQGPGPARDYSHYFKTIEDLR 493
            NEK TMQ LNDRLASYLEKVR LE+ N +LE +I++  Q+Q P    +Y  YF+TIE+L+
Sbjct: 99   NEKETMQFLNDRLASYLEKVRQLERDNAELERQIQERSQQQEPLVCPNYQSYFRTIEELQ 158

Query: 494  DKILGATIENSKIVLQIDNARLAADDFRTKFETEQALRLSVEADINGLRRVLDELTLART 673
             KIL A  EN+++V+Q+DNA+LAADDFRTK+E E++ R  VE+DIN LRR+LDELTL + 
Sbjct: 159  QKILSAKSENTRLVVQVDNAKLAADDFRTKYEVERSSRQLVESDINSLRRILDELTLCKA 218

Query: 674  DLELQIEGLKEELAYLKKNHEEEISALKGQVGGQVSVEVDSAPGIDLAKILSDMRSQYEV 853
            DLE Q+E L+EEL  LKKNHEEE+++L+ Q+G ++++EVD+AP +DL  +L++ RSQYE 
Sbjct: 219  DLETQVESLREELLCLKKNHEEEVNSLRSQLGDRLNIEVDAAPTVDLNSVLNETRSQYEA 278

Query: 854  MAEQNRKDAEAWFTSRTEELNREVAGHTEQLQISKTEVTDLRRTLQGLEIELQSQLSMKX 1033
            + E NR+D E WF  +TEELN++V   +EQLQ  + E+ +LRRT+  LE+ELQ+Q +++ 
Sbjct: 279  LVETNRRDVEEWFARQTEELNKQVVSSSEQLQSYQAEIIELRRTVNALEVELQAQHNLRD 338

Query: 1034 XXXXXXXXXXXRFGAQLAQIQ 1096
                       R+ +QLAQ+Q
Sbjct: 339  SLENTLTETEARYSSQLAQVQ 359


  Database: RefSeq49_SP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 11,343,932
  Number of sequences in database:  24,897
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 22,456,833
Number of extensions: 705499
Number of successful extensions: 3334
Number of sequences better than 1.0e-05: 59
Number of HSP's gapped: 3176
Number of HSP's successfully gapped: 59
Length of query: 365
Length of database: 11,343,932
Length adjustment: 100
Effective length of query: 265
Effective length of database: 8,854,232
Effective search space: 2346371480
Effective search space used: 2346371480
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)

BLASTN 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-001864
         (1096 letters)

Database: Sscrofa_10.2.fasta 
           4582 sequences; 2,808,509,378 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Sscrofa_Chr12                                                         430   e-118
Sscrofa_Chr05                                                          64   2e-07

>Sscrofa_Chr12 
||          Length = 63588571

 Score =  430 bits (217), Expect = e-118
 Identities = 220/221 (99%)
 Strand = Plus / Plus

                                                                            
Query: 8        gccgccccgcagcacctccgaccggtgtcgcccgcgtctgccttcgccatgacttcctac 67
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21536808 gccgccccgcagcacctccgaccggtgtcgcccgcgtctgccttcgccatgacttcctac 21536867

                                                                            
Query: 68       agctatcgccagtcgtcggccacctcgtccttcgggggtctgggcggcggctccctgcgc 127
                |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 21536868 agctatcgccagtcgtcggccacctcgtccttcgggggtctgggcggcggctccgtgcgc 21536927

                                                                            
Query: 128      ttcagcgcgggaggcgccttccgcgcccccagcatccacgggggctccggcggccgcggc 187
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21536928 ttcagcgcgggaggcgccttccgcgcccccagcatccacgggggctccggcggccgcggc 21536987

                                                         
Query: 188      gtgtcggtgtcgtccgcccgcttcgtgtcctcgtcctcctc 228
                |||||||||||||||||||||||||||||||||||||||||
Sbjct: 21536988 gtgtcggtgtcgtccgcccgcttcgtgtcctcgtcctcctc 21537028



 Score =  416 bits (210), Expect = e-113
 Identities = 216/218 (99%)
 Strand = Plus / Plus

                                                                            
Query: 282      ctctggccggttccgacgggctgctggcgggcaacgagaaactcaccatgcagaacctca 341
                |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 21537070 ctctggccggttccgacgggctgctggcgggcaacgagaagctcaccatgcagaacctca 21537129

                                                                            
Query: 342      acgaccgcctggcctcctacctggagaaggtgcgcgccttggagcaggccaacggtgacc 401
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21537130 acgaccgcctggcctcctacctggagaaggtgcgcgccttggagcaggccaacggtgacc 21537189

                                                                            
Query: 402      tggaggtgaagatccgcgactggtaccagaagcaggggcccgggcctgcccgcgactaca 461
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21537190 tggaggtgaagatccgcgactggtaccagaagcaggggcccgggcctgcccgcgactaca 21537249

                                                      
Query: 462      gccactacttcaagaccattgaggacctgcgggacaag 499
                ||||||||||||||||||| ||||||||||||||||||
Sbjct: 21537250 gccactacttcaagaccatcgaggacctgcgggacaag 21537287



 Score =  325 bits (164), Expect = 3e-86
 Identities = 164/164 (100%)
 Strand = Plus / Plus

                                                                            
Query: 738      aggaaatcagtgccctgaagggccaggtgggcggccaggtcagtgtggaggttgattcgg 797
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21539379 aggaaatcagtgccctgaagggccaggtgggcggccaggtcagtgtggaggttgattcgg 21539438

                                                                            
Query: 798      ctccgggcatcgacctagccaagatcctgagcgacatgagaagccagtatgaggtcatgg 857
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21539439 ctccgggcatcgacctagccaagatcctgagcgacatgagaagccagtatgaggtcatgg 21539498

                                                            
Query: 858      ctgagcagaaccggaaggatgctgaggcctggttcaccagccgg 901
                ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21539499 ctgagcagaaccggaaggatgctgaggcctggttcaccagccgg 21539542



 Score =  305 bits (154), Expect = 3e-80
 Identities = 157/158 (99%)
 Strand = Plus / Plus

                                                                            
Query: 583      gttcgagacagagcaggccctgcgcctgagcgtggaggccgacatcaacggcctgcgcag 642
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21538976 gttcgagacagagcaggccctgcgcctgagcgtggaggccgacatcaacggcctgcgcag 21539035

                                                                            
Query: 643      ggtgctggacgagctgaccctggccaggactgacctggagctgcagatcgaaggcctgaa 702
                |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 21539036 ggtgctggacgagctgaccctggccaggaccgacctggagctgcagatcgaaggcctgaa 21539095

                                                      
Query: 703      ggaagagctggcctacctgaagaagaaccacgaggagg 740
                ||||||||||||||||||||||||||||||||||||||
Sbjct: 21539096 ggaagagctggcctacctgaagaagaaccacgaggagg 21539133



 Score =  246 bits (124), Expect = 2e-62
 Identities = 157/168 (93%)
 Strand = Plus / Plus

                                                                            
Query: 326      accatgcagaacctcaacgaccgcctggcctcctacctggagaaggtgcgcgccttggag 385
                ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||
Sbjct: 21316374 accatgcagaacctcaacgaccgcctggcctcctacctggacaaggtgcgcgccctggag 21316433

                                                                            
Query: 386      caggccaacggtgacctggaggtgaagatccgcgactggtaccagaagcaggggcccggg 445
                 |||||||||  ||||||||||||||||||| |||||||||| |||||||||| ||||||
Sbjct: 21316434 gaggccaacgccgacctggaggtgaagatccacgactggtacaagaagcagggccccggg 21316493

                                                                
Query: 446      cctgcccgcgactacagccactacttcaagaccattgaggacctgcgg 493
                ||||||||||||||||||  ||||||||||||||| ||||||||||||
Sbjct: 21316494 cctgcccgcgactacagcgcctacttcaagaccatcgaggacctgcgg 21316541



 Score =  244 bits (123), Expect = 9e-62
 Identities = 126/127 (99%)
 Strand = Plus / Plus

                                                                            
Query: 901      gactgaggagctgaaccgggaggtcgctggccacacggagcagctgcagatcagcaagac 960
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21539633 gactgaggagctgaaccgggaggtcgctggccacacggagcagctgcagatcagcaagac 21539692

                                                                            
Query: 961      ggaggtcaccgatctgcggcgcaccctccagggtctggagatcgagctgcagtctcagct 1020
                ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21539693 ggaagtcaccgatctgcggcgcaccctccagggtctggagatcgagctgcagtctcagct 21539752

                       
Query: 1021     cagcatg 1027
                |||||||
Sbjct: 21539753 cagcatg 21539759



 Score =  222 bits (112), Expect = 3e-55
 Identities = 172/192 (89%)
 Strand = Plus / Plus

                                                                            
Query: 299      gggctgctggcgggcaacgagaaactcaccatgcagaacctcaacgaccgcctggcctcc 358
                ||||||||||| || | ||||||   |||||||||||||||||| |||||||||||||||
Sbjct: 21326624 gggctgctggccggaagcgagaaggccaccatgcagaacctcaatgaccgcctggcctcc 21326683

                                                                            
Query: 359      tacctggagaaggtgcgcgccttggagcaggccaacggtgacctggaggtgaagatccgc 418
                |||||||| |||||||||||| ||||| |||||||||  |||||||||||||||||||||
Sbjct: 21326684 tacctggacaaggtgcgcgccctggaggaggccaacgccgacctggaggtgaagatccgc 21326743

                                                                            
Query: 419      gactggtaccagaagcaggggcccgggcctgcccgcgactacagccactacttcaagacc 478
                ||||||||||||| |||||  || ||||| || | |||||||||||||||||||||||||
Sbjct: 21326744 gactggtaccagaggcaggccccagggcccgctcccgactacagccactacttcaagacc 21326803

                            
Query: 479      attgaggacctg 490
                || |||||||||
Sbjct: 21326804 atcgaggacctg 21326815



 Score =  210 bits (106), Expect = 1e-51
 Identities = 171/192 (89%), Gaps = 3/192 (1%)
 Strand = Plus / Minus

                                                                            
Query: 311      ggcaacgagaaactcaccatgcagaacctcaacgaccgcctggcctcctacctggagaag 370
                |||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21479447 ggcaacgagaagatcaccatgcagaacctcaacgaccgcctggcctcctacctggagaag 21479388

                                                                            
Query: 371      gtgcgcgccttggagcaggccaacggtgacctggaggtgaagatccgcgactggtaccag 430
                ||||||||| ||||| ||||||||  ||||||||||||||||||||| ||||||||||||
Sbjct: 21479387 gtgcgcgccctggaggaggccaacactgacctggaggtgaagatccgtgactggtaccag 21479328

                                                                            
Query: 431      aagcaggggcc---cgggcctgcccgcgactacagccactacttcaagaccattgaggac 487
                |||||| | ||   | | || |  ||||||||||||| ||||||||||||||| ||||| 
Sbjct: 21479327 aagcagagccccagcagcccggagcgcgactacagcccctacttcaagaccatcgaggag 21479268

                            
Query: 488      ctgcgggacaag 499
                || |||||||||
Sbjct: 21479267 ctccgggacaag 21479256



 Score =  208 bits (105), Expect = 5e-51
 Identities = 132/141 (93%)
 Strand = Plus / Minus

                                                                            
Query: 600      ccctgcgcctgagcgtggaggccgacatcaacggcctgcgcagggtgctggacgagctga 659
                ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21844461 ccctgcgccagagcgtggaggccgacatcaacggcctgcgcagggtgctggacgagctga 21844402

                                                                            
Query: 660      ccctggccaggactgacctggagctgcagatcgaaggcctgaaggaagagctggcctacc 719
                ||||| ||| ||| ||||||||| ||||||| ||| ||||||| || |||||||||||||
Sbjct: 21844401 ccctgaccaagaccgacctggagatgcagattgaaagcctgaatgaggagctggcctacc 21844342

                                     
Query: 720      tgaagaagaaccacgaggagg 740
                |||||||||||||||||||||
Sbjct: 21844341 tgaagaagaaccacgaggagg 21844321



 Score =  198 bits (100), Expect = 5e-48
 Identities = 178/204 (87%)
 Strand = Plus / Plus

                                                                            
Query: 296      gacgggctgctggcgggcaacgagaaactcaccatgcagaacctcaacgaccgcctggcc 355
                |||||||| |||| ||||| ||||||  | ||||||||||||||||||||||||||||||
Sbjct: 21339782 gacgggctcctggtgggcagcgagaaggtgaccatgcagaacctcaacgaccgcctggcc 21339841

                                                                            
Query: 356      tcctacctggagaaggtgcgcgccttggagcaggccaacggtgacctggaggtgaagatc 415
                ||||||||||| |||||||||||| ||||| |||||||||  ||||||||||||||||||
Sbjct: 21339842 tcctacctggacaaggtgcgcgccctggaggaggccaacgccgacctggaggtgaagatc 21339901

                                                                            
Query: 416      cgcgactggtaccagaagcaggggcccgggcctgcccgcgactacagccactacttcaag 475
                |||||||||||||||| |||| |||| |      ||   |||||||||| ||||||||||
Sbjct: 21339902 cgcgactggtaccagaggcagcggccggctgagtccaaggactacagcccctacttcaag 21339961

                                        
Query: 476      accattgaggacctgcgggacaag 499
                ||||| |||||||||||| |||||
Sbjct: 21339962 accatcgaggacctgcggaacaag 21339985



 Score =  190 bits (96), Expect = 1e-45
 Identities = 135/148 (91%)
 Strand = Plus / Minus

                                                                            
Query: 593      gagcaggccctgcgcctgagcgtggaggccgacatcaacggcctgcgcagggtgctggac 652
                |||| ||| ||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 21492854 gagctggcgctgcgccagggcgtggaggccgacatcaacggcctgcgcagggtgctggac 21492795

                                                                            
Query: 653      gagctgaccctggccaggactgacctggagctgcagatcgaaggcctgaaggaagagctg 712
                ||||||||| || ||| ||||||||||||| ||||||||||  ||||||| || ||||||
Sbjct: 21492794 gagctgaccttgaccaagactgacctggagatgcagatcgagagcctgaacgaggagctg 21492735

                                            
Query: 713      gcctacctgaagaagaaccacgaggagg 740
                |||||||||||||||||||| |||||||
Sbjct: 21492734 gcctacctgaagaagaaccatgaggagg 21492707



 Score =  186 bits (94), Expect = 2e-44
 Identities = 168/192 (87%), Gaps = 3/192 (1%)
 Strand = Plus / Minus

                                                                            
Query: 311      ggcaacgagaaactcaccatgcagaacctcaacgaccgcctggcctcctacctggagaag 370
                |||||||||||  ||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 21494024 ggcaacgagaagatcaccatgcagaacctcaacgaccgcctggcctcctacctggacaag 21493965

                                                                            
Query: 371      gtgcgcgccttggagcaggccaacggtgacctggaggtgaagatccgcgactggtaccag 430
                ||||||||| ||||| |||||||||  |||||||||||||||||||  ||||||||| ||
Sbjct: 21493964 gtgcgcgccctggaggaggccaacgccgacctggaggtgaagatccatgactggtacaag 21493905

                                                                            
Query: 431      aagcaggggcc---cgggcctgcccgcgactacagccactacttcaagaccattgaggac 487
                |||||| | ||   | | || |  ||||||||||||| ||||||||||||||| ||||| 
Sbjct: 21493904 aagcagagccccagcagcccggagcgcgactacagcccctacttcaagaccatggaggag 21493845

                            
Query: 488      ctgcgggacaag 499
                || |||||||||
Sbjct: 21493844 ctccgggacaag 21493833



 Score =  184 bits (93), Expect = 7e-44
 Identities = 129/141 (91%)
 Strand = Plus / Minus

                                                                            
Query: 600      ccctgcgcctgagcgtggaggccgacatcaacggcctgcgcagggtgctggacgagctga 659
                ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 21477790 ccctgcgccagagcgtggaggccgacatcaacggcctgcgcagggtgctggatgagctga 21477731

                                                                            
Query: 660      ccctggccaggactgacctggagctgcagatcgaaggcctgaaggaagagctggcctacc 719
                || || ||| ||| ||||||||| ||||||||||  ||||||| || |||||||||| ||
Sbjct: 21477730 ccttgaccaagaccgacctggagatgcagatcgagagcctgaacgaggagctggccttcc 21477671

                                     
Query: 720      tgaagaagaaccacgaggagg 740
                |||||||||||||||||||||
Sbjct: 21477670 tgaagaagaaccacgaggagg 21477650



 Score =  172 bits (87), Expect = 3e-40
 Identities = 87/87 (100%)
 Strand = Plus / Plus

                                                                            
Query: 498      agattctcggtgccaccattgagaactccaagatagtcctgcagatcgacaacgcccgtc 557
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21538664 agattctcggtgccaccattgagaactccaagatagtcctgcagatcgacaacgcccgtc 21538723

                                           
Query: 558      tggctgcagatgacttccgaaccaagt 584
                |||||||||||||||||||||||||||
Sbjct: 21538724 tggctgcagatgacttccgaaccaagt 21538750



 Score =  167 bits (84), Expect = 2e-38
 Identities = 126/140 (90%)
 Strand = Plus / Plus

                                                                            
Query: 601      cctgcgcctgagcgtggaggccgacatcaacggcctgcgcagggtgctggacgagctgac 660
                ||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 21342011 cctgcgcatgagcgtggaggccgacatcaacgggctgcgcagggtgctggacgagctgac 21342070

                                                                            
Query: 661      cctggccaggactgacctggagctgcagatcgaaggcctgaaggaagagctggcctacct 720
                |||||||||  | ||||||||| ||||||||||  |||| ||||| ||||||||||||||
Sbjct: 21342071 cctggccagagccgacctggagatgcagatcgagagcctcaaggaggagctggcctacct 21342130

                                    
Query: 721      gaagaagaaccacgaggagg 740
                    ||||||||||||||||
Sbjct: 21342131 ccgaaagaaccacgaggagg 21342150



 Score =  159 bits (80), Expect = 4e-36
 Identities = 125/140 (89%)
 Strand = Plus / Plus

                                                                            
Query: 601      cctgcgcctgagcgtggaggccgacatcaacggcctgcgcagggtgctggacgagctgac 660
                ||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 21320070 cctgcgcatgagcgtggaggccgacatcaacgggctgcgcagggtgctggacgagctgac 21320129

                                                                            
Query: 661      cctggccaggactgacctggagctgcagatcgaaggcctgaaggaagagctggcctacct 720
                |||||||||  | ||||||||| ||||||||||   ||| ||||| ||||||||||||||
Sbjct: 21320130 cctggccagagccgacctggagatgcagatcgagaacctcaaggaggagctggcctacct 21320189

                                    
Query: 721      gaagaagaaccacgaggagg 740
                    ||||||||||||||||
Sbjct: 21320190 ccgaaagaaccacgaggagg 21320209



 Score =  157 bits (79), Expect = 2e-35
 Identities = 127/143 (88%)
 Strand = Plus / Minus

                                                                            
Query: 598      ggccctgcgcctgagcgtggaggccgacatcaacggcctgcgcagggtgctggacgagct 657
                ||||||| ||| || ||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 21883754 ggccctgtgccagaacgtggaggccgacatcaacgggctgcgcagggtgctggacgagct 21883695

                                                                            
Query: 658      gaccctggccaggactgacctggagctgcagatcgaaggcctgaaggaagagctggccta 717
                |||||||| |||  | |||||||||   ||||||||   |||||| || |||||||||||
Sbjct: 21883694 gaccctggtcagagccgacctggagacccagatcgagaccctgaacgaggagctggccta 21883635

                                       
Query: 718      cctgaagaagaaccacgaggagg 740
                |||||||||||||||||||||||
Sbjct: 21883634 cctgaagaagaaccacgaggagg 21883612



 Score =  155 bits (78), Expect = 6e-35
 Identities = 138/158 (87%)
 Strand = Plus / Plus

                                                                            
Query: 583      gttcgagacagagcaggccctgcgcctgagcgtggaggccgacatcaacggcctgcgcag 642
                ||||||||| ||||||||||||||  |||||||||||||||||||||| || ||||||||
Sbjct: 21328325 gttcgagacggagcaggccctgcgtgtgagcgtggaggccgacatcaatgggctgcgcag 21328384

                                                                            
Query: 643      ggtgctggacgagctgaccctggccaggactgacctggagctgcagatcgaaggcctgaa 702
                ||||||||| |||||||||||||||||  | || |||||| ||||||||||   ||| ||
Sbjct: 21328385 ggtgctggatgagctgaccctggccagagccgatctggagatgcagatcgagaacctcaa 21328444

                                                      
Query: 703      ggaagagctggcctacctgaagaagaaccacgaggagg 740
                ||| ||||||||||||||    ||||||||||||||||
Sbjct: 21328445 ggaggagctggcctacctccgaaagaaccacgaggagg 21328482



 Score =  131 bits (66), Expect = 9e-28
 Identities = 69/70 (98%)
 Strand = Plus / Plus

                                                                            
Query: 1027     gaaagccgccctggaaggcacgctggcggaaacggaagctcgcttcggagcccagctggc 1086
                |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 21539895 gaaagccgccctggaaggcacgctggcggaaacggaggctcgcttcggagcccagctggc 21539954

                          
Query: 1087     acagatccag 1096
                ||||||||||
Sbjct: 21539955 acagatccag 21539964



 Score =  113 bits (57), Expect = 2e-22
 Identities = 93/105 (88%)
 Strand = Plus / Minus

                                                                            
Query: 311      ggcaacgagaaactcaccatgcagaacctcaacgaccgcctggcctcctacctggagaag 370
                |||||||||||  | ||||||||||||||||| ||||||||||||||||||||||| || 
Sbjct: 21785280 ggcaacgagaaggtgaccatgcagaacctcaatgaccgcctggcctcctacctggacaac 21785221

                                                             
Query: 371      gtgcgcgccttggagcaggccaacggtgacctggaggtgaagatc 415
                ||||||||| ||||| |||||||||  |||||||||  |||||||
Sbjct: 21785220 gtgcgcgccctggaggaggccaacgccgacctggagcagaagatc 21785176



 Score =  113 bits (57), Expect = 2e-22
 Identities = 93/105 (88%)
 Strand = Plus / Minus

                                                                            
Query: 311      ggcaacgagaaactcaccatgcagaacctcaacgaccgcctggcctcctacctggagaag 370
                |||||||||||  | ||||||||||||||||| ||||||||||||||||||||||| || 
Sbjct: 21811601 ggcaacgagaaggtgaccatgcagaacctcaatgaccgcctggcctcctacctggacaac 21811542

                                                             
Query: 371      gtgcgcgccttggagcaggccaacggtgacctggaggtgaagatc 415
                ||||||||| ||||| |||||||||  |||||||||  |||||||
Sbjct: 21811541 gtgcgcgccctggaggaggccaacgccgacctggagcagaagatc 21811497



 Score =  107 bits (54), Expect = 1e-20
 Identities = 66/70 (94%)
 Strand = Plus / Minus

                                                                            
Query: 326      accatgcagaacctcaacgaccgcctggcctcctacctggagaaggtgcgcgccttggag 385
                ||||||| ||||||||||||||||||||||||||||||||| |||||||||||| |||||
Sbjct: 21958899 accatgcggaacctcaacgaccgcctggcctcctacctggacaaggtgcgcgccctggag 21958840

                          
Query: 386      caggccaacg 395
                 |||||||||
Sbjct: 21958839 gaggccaacg 21958830



 Score = 93.7 bits (47), Expect = 2e-16
 Identities = 65/71 (91%)
 Strand = Plus / Minus

                                                                            
Query: 670      gactgacctggagctgcagatcgaaggcctgaaggaagagctggcctacctgaagaagaa 729
                ||||||||||||| ||||||||||  ||||||| || |||||||||||||||||||||||
Sbjct: 21444553 gactgacctggagatgcagatcgagagcctgaacgaggagctggcctacctgaagaagaa 21444494

                           
Query: 730      ccacgaggagg 740
                ||| |||||||
Sbjct: 21444493 ccatgaggagg 21444483



 Score = 81.8 bits (41), Expect = 7e-13
 Identities = 68/77 (88%)
 Strand = Plus / Minus

                                                                            
Query: 326      accatgcagaacctcaacgaccgcctggcctcctacctggagaaggtgcgcgccttggag 385
                ||||||||||||||||| |||||||||||||||||||||||  | ||||| ||  |||||
Sbjct: 21799553 accatgcagaacctcaatgaccgcctggcctcctacctggaccatgtgcgtgctctggag 21799494

                                 
Query: 386      caggccaacggtgacct 402
                 ||||||||| ||||||
Sbjct: 21799493 gaggccaacgctgacct 21799477



 Score = 77.8 bits (39), Expect = 1e-11
 Identities = 69/79 (87%)
 Strand = Plus / Minus

                                                                            
Query: 947      cagatcagcaagacggaggtcaccgatctgcggcgcaccctccagggtctggagatcgag 1006
                |||| ||||||||||||| |||| || ||  |||| || |||||||| ||||||||||||
Sbjct: 21477208 cagaccagcaagacggagatcacggagctcaggcgaacactccagggcctggagatcgag 21477149

                                   
Query: 1007     ctgcagtctcagctcagca 1025
                |||||||| ||||||||||
Sbjct: 21477148 ctgcagtcccagctcagca 21477130



 Score = 73.8 bits (37), Expect = 2e-10
 Identities = 106/129 (82%)
 Strand = Plus / Minus

                                                                            
Query: 612      gcgtggaggccgacatcaacggcctgcgcagggtgctggacgagctgaccctggccagga 671
                ||||||| || ||||||| ||| |||||| |||||||||||||||||||||||  |||||
Sbjct: 21810030 gcgtggacgcggacatcagcggtctgcgccgggtgctggacgagctgaccctgtgcagga 21809971

                                                                            
Query: 672      ctgacctggagctgcagatcgaaggcctgaaggaagagctggcctacctgaagaagaacc 731
                | ||| | ||| | ||| | ||   |||||  || |||||||| ||||| |||||||| |
Sbjct: 21809970 ccgacttagagattcagctggagaccctgagcgaggagctggcttacctcaagaagaatc 21809911

                         
Query: 732      acgaggagg 740
                |||||||||
Sbjct: 21809910 acgaggagg 21809902



 Score = 73.8 bits (37), Expect = 2e-10
 Identities = 70/81 (86%)
 Strand = Plus / Minus

                                                                            
Query: 326      accatgcagaacctcaacgaccgcctggcctcctacctggagaaggtgcgcgccttggag 385
                ||||||||||||||||| ||||||||||||   ||||| || |||||  | |||||||||
Sbjct: 22060713 accatgcagaacctcaatgaccgcctggccaattacctagacaaggtcagggccttggag 22060654

                                     
Query: 386      caggccaacggtgacctggag 406
                 ||||||||| ||||||||||
Sbjct: 22060653 gaggccaacgctgacctggag 22060633



 Score = 69.9 bits (35), Expect = 3e-09
 Identities = 107/131 (81%)
 Strand = Plus / Minus

                                                                            
Query: 610      gagcgtggaggccgacatcaacggcctgcgcagggtgctggacgagctgaccctggccag 669
                ||||||||| |||||||||||||||||||| |  || ||||||||  ||||| || |  |
Sbjct: 22059210 gagcgtggaagccgacatcaacggcctgcggaaagtcctggacgacttgaccatgactcg 22059151

                                                                            
Query: 670      gactgacctggagctgcagatcgaaggcctgaaggaagagctggcctacctgaagaagaa 729
                  | ||||| ||| ||||||| ||   ||||  ||| |||||| ||||||||||||||||
Sbjct: 22059150 ctcggacctcgagatgcagatggagaacctggtggaggagctgacctacctgaagaagaa 22059091

                           
Query: 730      ccacgaggagg 740
                |||||||||||
Sbjct: 22059090 ccacgaggagg 22059080



 Score = 65.9 bits (33), Expect = 4e-08
 Identities = 60/69 (86%)
 Strand = Plus / Minus

                                                                            
Query: 614      gtggaggccgacatcaacggcctgcgcagggtgctggacgagctgaccctggccaggact 673
                |||||| | |||||||| |||||||||||| | ||||||||||||||||||  || | ||
Sbjct: 21407848 gtggagtcagacatcaatggcctgcgcaggatcctggacgagctgaccctgtgcaaggct 21407789

                         
Query: 674      gacctggag 682
                |||||||||
Sbjct: 21407788 gacctggag 21407780



 Score = 61.9 bits (31), Expect = 7e-07
 Identities = 46/51 (90%)
 Strand = Plus / Plus

                                                                   
Query: 977      cggcgcaccctccagggtctggagatcgagctgcagtctcagctcagcatg 1027
                ||||||||| | ||||  |||||||||||||||||||| ||||||||||||
Sbjct: 21329939 cggcgcaccatgcaggcgctggagatcgagctgcagtcccagctcagcatg 21329989



 Score = 61.9 bits (31), Expect = 7e-07
 Identities = 103/127 (81%)
 Strand = Plus / Minus

                                                                            
Query: 614      gtggaggccgacatcaacggcctgcgcagggtgctggacgagctgaccctggccaggact 673
                |||||||| || | ||||||||||||| || | |||||||||||||| |||  || | ||
Sbjct: 21439706 gtggaggctgataccaacggcctgcgccggatcctggacgagctgacgctgtgcaaggct 21439647

                                                                            
Query: 674      gacctggagctgcagatcgaaggcctgaaggaagagctggcctacctgaagaagaaccac 733
                ||||||||| ||||| | ||   |||||| || ||||||   | ||| ||||||||||||
Sbjct: 21439646 gacctggagatgcaggtggagtccctgaaagaggagctgatgtgcctcaagaagaaccac 21439587

                       
Query: 734      gaggagg 740
                |||||||
Sbjct: 21439586 gaggagg 21439580



 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 48/54 (88%)
 Strand = Plus / Minus

                                                                      
Query: 629      aacggcctgcgcagggtgctggacgagctgaccctggccaggactgacctggag 682
                ||||||||||||||| | ||||||||||||||||||  || | |||||||||||
Sbjct: 21366209 aacggcctgcgcaggatcctggacgagctgaccctgtgcaaggctgacctggag 21366156



 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 66/78 (84%)
 Strand = Plus / Minus

                                                                            
Query: 329      atgcagaacctcaacgaccgcctggcctcctacctggagaaggtgcgcgccttggagcag 388
                |||||||| ||||| ||||||||||| ||||||||||| || ||||| ||  ||||| ||
Sbjct: 21829560 atgcagaatctcaatgaccgcctggcatcctacctggataacgtgcgagctctggaggag 21829501

                                  
Query: 389      gccaacggtgacctggag 406
                || || | ||||||||||
Sbjct: 21829500 gcaaatgctgacctggag 21829483


>Sscrofa_Chr05 
||          Length = 111506441

 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 44/48 (91%)
 Strand = Plus / Plus

                                                                
Query: 326      accatgcagaacctcaacgaccgcctggcctcctacctggagaaggtg 373
                ||||||||| |||| || ||||||||||||||||||||||||| ||||
Sbjct: 18726338 accatgcaggacctgaatgaccgcctggcctcctacctggagagggtg 18726385


  Database: Sscrofa_10.2.fasta
    Posted date:  Nov 16, 2011 10:34 AM
  Number of letters in database: 2,808,509,378
  Number of sequences in database:  4582
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 21,054,972
Number of extensions: 194
Number of successful extensions: 194
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 193
Number of HSP's successfully gapped: 37
Length of query: 1096
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 1075
Effective length of database: 2,808,413,156
Effective search space: 3019044142700
Effective search space used: 3019044142700
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)