Animal-Genome cDNA 20110601C-001874

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-001874
         (2145 letters)

Database: RefSeq49_BP.fasta 
           33,088 sequences; 17,681,374 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001073105.1| heat shock protein HSP 90-beta [Bos taurus].     1041   0.0  
Alignment   gi|NP_001012688.1| heat shock protein HSP 90-alpha [Bos taurus].     944   0.0  
Alignment   gi|NP_777125.1| endoplasmin precursor [Bos taurus].                  398   e-110
Alignment   gi|NP_001033764.1| heat shock protein 75 kDa, mitochondrial pre...   176   7e-44

>ref|NP_001073105.1| heat shock protein HSP 90-beta [Bos taurus].
          Length = 724

 Score = 1041 bits (2692), Expect = 0.0
 Identities = 540/620 (87%), Positives = 540/620 (87%)
 Frame = +3

Query: 3    IAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAEKVVVITKHNDDEQYAWESSAGGS 182
            IAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAEKVVVITKHNDDEQYAWESSAGGS
Sbjct: 105  IAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAEKVVVITKHNDDEQYAWESSAGGS 164

Query: 183  FTVRADHGEPIGRGTKVILHLKEDQTEYLEERRVKEVVKKHSQFIGYPITLYLEKXXXXX 362
            FTVRADHGEPIGRGTKVILHLKEDQTEYLEERRVKEVVKKHSQFIGYPITLYLEK     
Sbjct: 165  FTVRADHGEPIGRGTKVILHLKEDQTEYLEERRVKEVVKKHSQFIGYPITLYLEKEREKE 224

Query: 363  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYIDQEELNK 542
                                                               YIDQEELNK
Sbjct: 225  ISDDEAEEEKGEKEEEDKDDEEKPKIEDVGSDEEDDSGKDKKKKTKKIKEKYIDQEELNK 284

Query: 543  TKPIWTRNPDDITQEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFIPRRAPFDLF 722
            TKPIWTRNPDDITQEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFIPRRAPFDLF
Sbjct: 285  TKPIWTRNPDDITQEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFIPRRAPFDLF 344

Query: 723  ENKKKKNNIKLYVRRVFIMDSCDELIPEYLNFIRGVVDSEDLPLNISREMLQQSKILKVI 902
            ENKKKKNNIKLYVRRVFIMDSCDELIPEYLNFIRGVVDSEDLPLNISREMLQQSKILKVI
Sbjct: 345  ENKKKKNNIKLYVRRVFIMDSCDELIPEYLNFIRGVVDSEDLPLNISREMLQQSKILKVI 404

Query: 903  RKNIVKKCLELFSELAEDKENYKKFYEAFSKNLKLGIHEDSTNRRRLSELLRYHTSQSGD 1082
            RKNIVKKCLELFSELAEDKENYKKFYEAFSKNLKLGIHEDSTNRRRLSELLRYHTSQSGD
Sbjct: 405  RKNIVKKCLELFSELAEDKENYKKFYEAFSKNLKLGIHEDSTNRRRLSELLRYHTSQSGD 464

Query: 1083 EMTSLSEYVSRMKETQKSIYYITGESKEQVANSAFVERVRKRGFEVVYMTEPIDEYCVQQ 1262
            EMTSLSEYVSRMKETQKSIYYITGESKEQVANSAFVERVRKRGFEVVYMTEPIDEYCVQQ
Sbjct: 465  EMTSLSEYVSRMKETQKSIYYITGESKEQVANSAFVERVRKRGFEVVYMTEPIDEYCVQQ 524

Query: 1263 LKEFDGKSLVSVTXXXXXXXXXXXXXXXXXXXXXXXXNLCKLMKEILDKKVEKVTISNRL 1442
            LKEFDGKSLVSVT                        NLCKLMKEILDKKVEKVTISNRL
Sbjct: 525  LKEFDGKSLVSVTKEGLELPEDEEEKKKMEESKAKFENLCKLMKEILDKKVEKVTISNRL 584

Query: 1443 VSSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMMAKKHLEINPDHPIVETLRQKAEA 1622
            VSSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMMAKKHLEINPDHPIVETLRQKAEA
Sbjct: 585  VSSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMMAKKHLEINPDHPIVETLRQKAEA 644

Query: 1623 DKNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNRIYRMIKLGLGIDEDEVTAEEPSAAV 1802
            DKNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNRIYRMIKLGLGIDEDEVTAEEPSAAV
Sbjct: 645  DKNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNRIYRMIKLGLGIDEDEVTAEEPSAAV 704

Query: 1803 PDEIPPLEGDEDASRMEEVD 1862
            PDEIPPLEGDEDASRMEEVD
Sbjct: 705  PDEIPPLEGDEDASRMEEVD 724


>ref|NP_001012688.1| heat shock protein HSP 90-alpha [Bos taurus].
          Length = 733

 Score =  944 bits (2440), Expect = 0.0
 Identities = 478/624 (76%), Positives = 518/624 (83%), Gaps = 4/624 (0%)
 Frame = +3

Query: 3    IAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAEKVVVITKHNDDEQYAWESSAGGS 182
            IAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAEKV VITKHNDDEQYAWESSAGGS
Sbjct: 110  IAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAEKVTVITKHNDDEQYAWESSAGGS 169

Query: 183  FTVRADHGEPIGRGTKVILHLKEDQTEYLEERRVKEVVKKHSQFIGYPITLYL----EKX 350
            FTVR D GEP+GRGTKVILHLKEDQTEYLEERR+KE+VKKHSQFIGYPITL++    +K 
Sbjct: 170  FTVRTDTGEPMGRGTKVILHLKEDQTEYLEERRIKEIVKKHSQFIGYPITLFVEKERDKE 229

Query: 351  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYIDQE 530
                                                                   YIDQE
Sbjct: 230  VSDDEAEEKEDKEEEKEKEEKESDDKPEIEDVGSDEEEEEKKDGDKKKKKKIKEKYIDQE 289

Query: 531  ELNKTKPIWTRNPDDITQEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFIPRRAP 710
            ELNKTKPIWTRNPDDIT EEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLF+PRRAP
Sbjct: 290  ELNKTKPIWTRNPDDITNEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFVPRRAP 349

Query: 711  FDLFENKKKKNNIKLYVRRVFIMDSCDELIPEYLNFIRGVVDSEDLPLNISREMLQQSKI 890
            FDLFEN+KKKNNIKLYVRRVFIMD+C+ELIPEYLNFIRGVVDSEDLPLNISREMLQQSKI
Sbjct: 350  FDLFENRKKKNNIKLYVRRVFIMDNCEELIPEYLNFIRGVVDSEDLPLNISREMLQQSKI 409

Query: 891  LKVIRKNIVKKCLELFSELAEDKENYKKFYEAFSKNLKLGIHEDSTNRRRLSELLRYHTS 1070
            LKVIRKN+VKKCLELF+ELAEDKENYKKFYE FSKN+KLGIHEDS NR++LSELLRY+TS
Sbjct: 410  LKVIRKNLVKKCLELFTELAEDKENYKKFYEQFSKNIKLGIHEDSQNRKKLSELLRYYTS 469

Query: 1071 QSGDEMTSLSEYVSRMKETQKSIYYITGESKEQVANSAFVERVRKRGFEVVYMTEPIDEY 1250
             SGDEM SL +Y +RMKE QK IYYITGE+K+QVANSAFVER+RK G EV+YM EPIDEY
Sbjct: 470  ASGDEMVSLKDYCTRMKENQKHIYYITGETKDQVANSAFVERLRKHGLEVIYMIEPIDEY 529

Query: 1251 CVQQLKEFDGKSLVSVTXXXXXXXXXXXXXXXXXXXXXXXXNLCKLMKEILDKKVEKVTI 1430
            CVQQLKEF+GK+LVSVT                        NLCK+MK+IL+KKVEKV +
Sbjct: 530  CVQQLKEFEGKTLVSVTKEGLELPEDEEEKKKQEEKKTKFENLCKIMKDILEKKVEKVVV 589

Query: 1431 SNRLVSSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMMAKKHLEINPDHPIVETLRQ 1610
            SNRLV+SPCCIVTSTYGWTANMERIMKAQALRDNSTMGYM AKKHLEINPDH I+ETLRQ
Sbjct: 590  SNRLVTSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMAAKKHLEINPDHSIIETLRQ 649

Query: 1611 KAEADKNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNRIYRMIKLGLGIDEDEVTAEEP 1790
            KAEADKNDK+VKDLV+LL+ETALLSSGFSLEDPQTH+NRIYRMIKLGLGIDED+ TA++ 
Sbjct: 650  KAEADKNDKSVKDLVILLYETALLSSGFSLEDPQTHANRIYRMIKLGLGIDEDDPTADDS 709

Query: 1791 SAAVPDEIPPLEGDEDASRMEEVD 1862
            SAAV +E+PPLEGD+D SRMEEVD
Sbjct: 710  SAAVTEEMPPLEGDDDTSRMEEVD 733


>ref|NP_777125.1| endoplasmin precursor [Bos taurus].
          Length = 804

 Score =  398 bits (1022), Expect = e-110
 Identities = 204/453 (45%), Positives = 288/453 (63%), Gaps = 6/453 (1%)
 Frame = +3

Query: 522  DQEELNKTKPIWTRNPDDITQEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFIPR 701
            D E +N  KPIW R   ++ ++EY  FYKS + + +D +A  HF+ EG++ F+++LF+P 
Sbjct: 332  DWELMNDIKPIWQRPSKEVEEDEYKAFYKSFSKESDDPMAYIHFTAEGEVTFKSILFVPT 391

Query: 702  RAPFDLFEN--KKKKNNIKLYVRRVFIMDSCDELIPEYLNFIRGVVDSEDLPLNISREML 875
             AP  LF+    KK + IKLYVRRVFI D   +++P+YLNF++GVVDS+DLPLN+SRE L
Sbjct: 392  SAPRGLFDEYGSKKSDYIKLYVRRVFITDDFHDMMPKYLNFVKGVVDSDDLPLNVSRETL 451

Query: 876  QQSKILKVIRKNIVKKCLELFSELAEDKENYKKFYEAFSKNLKLGIHEDSTNRRRLSELL 1055
            QQ K+LKVIRK +V+K L++  ++A++K N   F++ F  N+KLG+ ED +NR RL++LL
Sbjct: 452  QQHKLLKVIRKKLVRKTLDMIKKIADEKYN-DTFWKEFGTNIKLGVIEDHSNRTRLAKLL 510

Query: 1056 RYHTSQSGDEMTSLSEYVSRMKETQKSIYYITGESKEQVANSAFVERVRKRGFEVVYMTE 1235
            R+ +S    +MTSL +YV RMKE Q  IY++ G S+++  +S FVER+ K+G+EV+Y+TE
Sbjct: 511  RFQSSHHPSDMTSLDQYVERMKEKQDKIYFMAGASRKEAESSPFVERLLKKGYEVIYLTE 570

Query: 1236 PIDEYCVQQLKEFDGKSLVSVTXXXXXXXXXXXXXXXXXXXXXXXXNLCKLMKE-ILDKK 1412
            P+DEYC+Q L EFDGK   +V                          L   MK+  L  K
Sbjct: 571  PVDEYCIQALPEFDGKRFQNVAKEGVKFDESEKSKESREAVEKEFEPLLNWMKDKALKDK 630

Query: 1413 VEKVTISNRLVSSPCCIVTSTYGWTANMERIMKAQAL---RDNSTMGYMMAKKHLEINPD 1583
            +EK  +S RL  SPC +V S YGW+ NMERIMKAQA    +D ST  Y   KK  EINP 
Sbjct: 631  IEKAVVSQRLTESPCALVASQYGWSGNMERIMKAQAYQTGKDISTNYYASQKKTFEINPR 690

Query: 1584 HPIVETLRQKAEADKNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNRIYRMIKLGLGID 1763
            HP++  + ++ + D++DK V DL V+LFETA L SG+ L D + + +RI RM++L L ID
Sbjct: 691  HPLIRDMLRRVKEDEDDKTVSDLAVVLFETATLRSGYLLPDTKAYGDRIERMLRLSLNID 750

Query: 1764 EDEVTAEEPSAAVPDEIPPLEGDEDASRMEEVD 1862
             D    EEP     +       D +    EE+D
Sbjct: 751  PDAKVEEEPEEEPEETTEDTAEDTEQDEEEEMD 783



 Score =  113 bits (283), Expect = 6e-25
 Identities = 63/121 (52%), Positives = 85/121 (70%), Gaps = 6/121 (4%)
 Frame = +3

Query: 3   IAKSGTKAFM----EALQAGADIS-MIGQFGVGFYSAYLVAEKVVVITKHNDDEQYAWES 167
           IAKSGT  F+    EA + G   S +IGQFGVGFYSA+LVA+KV+V +KHN+D Q+ WES
Sbjct: 166 IAKSGTSEFLNKMTEAQEDGQSTSELIGQFGVGFYSAFLVADKVIVTSKHNNDTQHIWES 225

Query: 168 SAGGSFTVRAD-HGEPIGRGTKVILHLKEDQTEYLEERRVKEVVKKHSQFIGYPITLYLE 344
            +   F+V AD  G  +GRGT + L LKE+ ++YLE   +K +VKK+SQFI +PI ++  
Sbjct: 226 DS-NEFSVIADPRGNTLGRGTTITLVLKEEASDYLELDTIKNLVKKYSQFINFPIYVWSS 284

Query: 345 K 347
           K
Sbjct: 285 K 285


>ref|NP_001033764.1| heat shock protein 75 kDa, mitochondrial precursor [Bos taurus].
          Length = 703

 Score =  176 bits (446), Expect = 7e-44
 Identities = 104/418 (24%), Positives = 217/418 (51%), Gaps = 9/418 (2%)
 Frame = +3

Query: 516  YIDQEELNKTKPIWTRNPDDITQEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFI 695
            Y++   +N  + IW  +P D+ + ++ EFY+ +    +      H+  +  L  R++ ++
Sbjct: 285  YLNGRRMNTLQAIWMMDPKDVGEGQHEEFYRYVAQAHDRPRYTLHYRTDAPLSIRSIFYV 344

Query: 696  PRRAPFDLFENKKKKNNIKLYVRRVFIMDSCDELIPEYLNFIRGVVDSEDLPLNISREML 875
            P   P     +++  +++ LY R+V I      ++P +L F+RGVVDSED+PLN+SRE+L
Sbjct: 345  PDAKPSMFDVSRELGSSVSLYSRKVLIQTKATNILPTWLRFVRGVVDSEDIPLNLSRELL 404

Query: 876  QQSKILKVIRKNIVKKCLELFSELAE-DKENYKKFYEAFSKNLKLGIHEDSTN--RRRLS 1046
            Q+S +++ ++  + ++ ++ F++ ++ D E Y +F+E +   ++ GI   +    +  ++
Sbjct: 405  QESALIRKLQGVLQQRLIKFFTDQSKKDAEKYARFFEDYGLFVREGIVTTAEQEVKEDIA 464

Query: 1047 ELLRYHTSQ-SGDEMTSLSEYVSRMKETQKSIYYITGESKEQVANSAFVERVRKRGFEVV 1223
            +LLRY +S     ++TSLS+Y SRM+   ++IYY+   ++    +S + E ++++  EV+
Sbjct: 465  KLLRYESSALPAGQLTSLSDYASRMQAGTRNIYYLCAPNRHLAEHSPYYEAMKRKNTEVL 524

Query: 1224 YMTEPIDEYCVQQLKEFDGKSLVSV-----TXXXXXXXXXXXXXXXXXXXXXXXXNLCKL 1388
            +  E  DE  +  L+EFD K L+SV                              +L   
Sbjct: 525  FCYEQFDELTLLHLREFDKKKLISVETDIVVDHYKEEKFEDGAPAGDCLSEKETEDLMAW 584

Query: 1389 MKEILDKKVEKVTISNRLVSSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMMAKKHL 1568
            M+  L  ++  V ++ RL + P  I     G   +  R+ +    ++       + +  L
Sbjct: 585  MRNALGSRITDVKVTLRLDTHPAMITVLEMGAARHFLRMRQLAKTQEERAQ---LLQPTL 641

Query: 1569 EINPDHPIVETLRQKAEADKNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNRIYRMI 1742
            EINP H +++ L Q  +++ +    + LV  ++E A++++G  ++DP+    R+ +++
Sbjct: 642  EINPRHVLIKKLSQLRDSEPD--LAQLLVDQIYENAMITAGL-IDDPRPMVGRLNQLL 696



 Score = 97.8 bits (242), Expect = 3e-20
 Identities = 54/115 (46%), Positives = 75/115 (65%), Gaps = 4/115 (3%)
 Frame = +3

Query: 3   IAKSGTKAFMEALQ--AGADISMIGQFGVGFYSAYLVAEKVVVITKHNDDEQ--YAWESS 170
           IA+SG+KAF++ALQ  A A   +IGQFGVGFYSA++VA++V V ++  D     Y W S 
Sbjct: 174 IARSGSKAFLDALQNQAEAGSKIIGQFGVGFYSAFMVADRVEVYSRSVDAGSLGYRWLSD 233

Query: 171 AGGSFTVRADHGEPIGRGTKVILHLKEDQTEYLEERRVKEVVKKHSQFIGYPITL 335
             G F V    G  +  GTK+I+HLK D  E+  E RV++VV K+S F+ +P+ L
Sbjct: 234 GSGVFEVAEASG--VRTGTKIIIHLKADSREFASEARVRDVVTKYSNFVSFPLYL 286


  Database: RefSeq49_BP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 17,681,374
  Number of sequences in database:  33,088
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 72,213,555
Number of extensions: 1821404
Number of successful extensions: 5551
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 5536
Number of HSP's successfully gapped: 8
Length of query: 715
Length of database: 17,681,374
Length adjustment: 109
Effective length of query: 606
Effective length of database: 14,074,782
Effective search space: 8529317892
Effective search space used: 8529317892
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-001874
         (2145 letters)

Database: RefSeq49_CP.fasta 
           33,336 sequences; 18,874,504 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_537557.2| PREDICTED: similar to heat shock protein 1, alp...   927   0.0  
Alignment   gi|XP_868588.1| PREDICTED: similar to heat shock protein 1, alp...   908   0.0  
Alignment   gi|XP_850113.1| PREDICTED: similar to heat shock protein 1, bet...   711   0.0  
Alignment   gi|XP_532154.2| PREDICTED: similar to heat shock protein 1, bet...   538   e-152
Alignment   gi|XP_848783.1| PREDICTED: similar to heat shock protein 1, alp...   472   e-133
Alignment   gi|XP_850290.1| PREDICTED: similar to heat shock protein 1, bet...   459   e-129
Alignment   gi|XP_857137.1| PREDICTED: similar to Heat shock protein HSP 90...   442   e-124
Alignment   gi|XP_868585.1| PREDICTED: similar to Heat shock protein HSP 90...   397   e-110
Alignment   gi|NP_001003327.1| endoplasmin precursor [Canis lupus familiari...   395   e-110
Alignment   gi|XP_866014.1| PREDICTED: similar to heat shock protein HSP 90...   385   e-107

>ref|XP_537557.2| PREDICTED: similar to heat shock protein 1, alpha isoform 1 [Canis
            familiaris].
          Length = 615

 Score =  927 bits (2397), Expect = 0.0
 Identities = 469/615 (76%), Positives = 509/615 (82%), Gaps = 4/615 (0%)
 Frame = +3

Query: 30   MEALQAGADISMIGQFGVGFYSAYLVAEKVVVITKHNDDEQYAWESSAGGSFTVRADHGE 209
            MEALQAGADISMIGQFGVGFYSAYLVAEKV VITKHNDDEQYAWESSAGGSFTVR D GE
Sbjct: 1    MEALQAGADISMIGQFGVGFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDTGE 60

Query: 210  PIGRGTKVILHLKEDQTEYLEERRVKEVVKKHSQFIGYPITLYL----EKXXXXXXXXXX 377
            P+GRGTKVILHLKEDQTEYLEERR+KE+VKKHSQFIGYPITL++    +K          
Sbjct: 61   PMGRGTKVILHLKEDQTEYLEERRIKEIVKKHSQFIGYPITLFVEKERDKEVSDDEAEEK 120

Query: 378  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYIDQEELNKTKPIW 557
                                                          YIDQEELNKTKPIW
Sbjct: 121  EEKEEEKEKKEKESDDKPEIEDVGSDEEEEEKKDGDKKKKKKIKEKYIDQEELNKTKPIW 180

Query: 558  TRNPDDITQEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFIPRRAPFDLFENKKK 737
            TRNPDDIT EEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLF+PRRAPFDLFEN+KK
Sbjct: 181  TRNPDDITNEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFVPRRAPFDLFENRKK 240

Query: 738  KNNIKLYVRRVFIMDSCDELIPEYLNFIRGVVDSEDLPLNISREMLQQSKILKVIRKNIV 917
            KNNIKLYVRRVFIMD+C+ELIPEYLNFIRGVVDSEDLPLNISREMLQQSKILKVIRKN+V
Sbjct: 241  KNNIKLYVRRVFIMDNCEELIPEYLNFIRGVVDSEDLPLNISREMLQQSKILKVIRKNLV 300

Query: 918  KKCLELFSELAEDKENYKKFYEAFSKNLKLGIHEDSTNRRRLSELLRYHTSQSGDEMTSL 1097
            KKCLELF+ELAEDKENYKKFYE FSKN+KLGIHEDS NR++LSELLRY+TS SGDEM SL
Sbjct: 301  KKCLELFTELAEDKENYKKFYEQFSKNIKLGIHEDSQNRKKLSELLRYYTSASGDEMVSL 360

Query: 1098 SEYVSRMKETQKSIYYITGESKEQVANSAFVERVRKRGFEVVYMTEPIDEYCVQQLKEFD 1277
             +Y +RMKE QK IYYITGE+K+QVANSAFVER+RK G EV+YM EPIDEYCVQQLKEF+
Sbjct: 361  KDYCTRMKENQKHIYYITGETKDQVANSAFVERLRKHGLEVIYMIEPIDEYCVQQLKEFE 420

Query: 1278 GKSLVSVTXXXXXXXXXXXXXXXXXXXXXXXXNLCKLMKEILDKKVEKVTISNRLVSSPC 1457
            GK+LVSVT                        NLCK+MK+IL+KKVEKV +SNRLV+SPC
Sbjct: 421  GKTLVSVTKEGLELPEDEEEKKKQEEKKTKFENLCKIMKDILEKKVEKVVVSNRLVTSPC 480

Query: 1458 CIVTSTYGWTANMERIMKAQALRDNSTMGYMMAKKHLEINPDHPIVETLRQKAEADKNDK 1637
            CIVTSTYGWTANMERIMKAQALRDNSTMGYM AKKHLEINPDH I+ETLRQKAEADKNDK
Sbjct: 481  CIVTSTYGWTANMERIMKAQALRDNSTMGYMAAKKHLEINPDHSIIETLRQKAEADKNDK 540

Query: 1638 AVKDLVVLLFETALLSSGFSLEDPQTHSNRIYRMIKLGLGIDEDEVTAEEPSAAVPDEIP 1817
            +VKDLV+LL+ETALLSSGFSLEDPQTH+NRIYRMIKLGLGIDED+ TA++ SAAV +E+P
Sbjct: 541  SVKDLVILLYETALLSSGFSLEDPQTHANRIYRMIKLGLGIDEDDPTADDSSAAVSEEMP 600

Query: 1818 PLEGDEDASRMEEVD 1862
            PLEGD+D SRMEEVD
Sbjct: 601  PLEGDDDTSRMEEVD 615


>ref|XP_868588.1| PREDICTED: similar to heat shock protein 1, alpha isoform 3 [Canis
            familiaris].
          Length = 607

 Score =  908 bits (2346), Expect = 0.0
 Identities = 463/615 (75%), Positives = 502/615 (81%), Gaps = 4/615 (0%)
 Frame = +3

Query: 30   MEALQAGADISMIGQFGVGFYSAYLVAEKVVVITKHNDDEQYAWESSAGGSFTVRADHGE 209
            MEALQAGADISMIGQFGVGFYSAYLVAEKV VITKHNDDEQYAWESSAGGSFTVR D GE
Sbjct: 1    MEALQAGADISMIGQFGVGFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDTGE 60

Query: 210  PIGRGTKVILHLKEDQTEYLEERRVKEVVKKHSQFIGYPITLYL----EKXXXXXXXXXX 377
            P+GRGTKVILHLKEDQTEYLEERR+KE+VKKHSQFIGYPITL++    +K          
Sbjct: 61   PMGRGTKVILHLKEDQTEYLEERRIKEIVKKHSQFIGYPITLFVEKERDKEVSDDEAEEK 120

Query: 378  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYIDQEELNKTKPIW 557
                                                          YIDQEELNKTKPIW
Sbjct: 121  EEKEEEKEKKEKESDDKPEIEDVGSDEEEEEKKDGDKKKKKKIKEKYIDQEELNKTKPIW 180

Query: 558  TRNPDDITQEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFIPRRAPFDLFENKKK 737
            TRNPDDIT EEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLF+PRRAPFDLFEN+KK
Sbjct: 181  TRNPDDITNEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFVPRRAPFDLFENRKK 240

Query: 738  KNNIKLYVRRVFIMDSCDELIPEYLNFIRGVVDSEDLPLNISREMLQQSKILKVIRKNIV 917
            KNNIKLYVRRVFIMD+C+ELIPEYLNFIRGVVDSEDLPLNISREMLQQSKILKVIRKN+V
Sbjct: 241  KNNIKLYVRRVFIMDNCEELIPEYLNFIRGVVDSEDLPLNISREMLQQSKILKVIRKNLV 300

Query: 918  KKCLELFSELAEDKENYKKFYEAFSKNLKLGIHEDSTNRRRLSELLRYHTSQSGDEMTSL 1097
            KKCLELF+ELAEDKENYKKFYE FSKN+KLGIHEDS NR++LSELLRY+TS SGDEM SL
Sbjct: 301  KKCLELFTELAEDKENYKKFYEQFSKNIKLGIHEDSQNRKKLSELLRYYTSASGDEMVSL 360

Query: 1098 SEYVSRMKETQKSIYYITGESKEQVANSAFVERVRKRGFEVVYMTEPIDEYCVQQLKEFD 1277
             +Y +RMKE QK IYYITGE+K+QVANSAFVER+RK G EV+YM EPIDEYCVQQLKEF+
Sbjct: 361  KDYCTRMKENQKHIYYITGETKDQVANSAFVERLRKHGLEVIYMIEPIDEYCVQQLKEFE 420

Query: 1278 GKSLVSVTXXXXXXXXXXXXXXXXXXXXXXXXNLCKLMKEILDKKVEKVTISNRLVSSPC 1457
            GK+LVSVT                        NLCK+MK+IL+KKVEKV +SNRLV+SPC
Sbjct: 421  GKTLVSVTKEGLELPEDEEEKKKQEEKKTKFENLCKIMKDILEKKVEKVVVSNRLVTSPC 480

Query: 1458 CIVTSTYGWTANMERIMKAQALRDNSTMGYMMAKKHLEINPDHPIVETLRQKAEADKNDK 1637
            CIVTSTYGWTANMERIMKAQALRDNSTMGYM AKKHLEINPDH I+ETLRQKAEADKNDK
Sbjct: 481  CIVTSTYGWTANMERIMKAQALRDNSTMGYMAAKKHLEINPDHSIIETLRQKAEADKNDK 540

Query: 1638 AVKDLVVLLFETALLSSGFSLEDPQTHSNRIYRMIKLGLGIDEDEVTAEEPSAAVPDEIP 1817
            +VKDLV+LL+ETALLSSGFSLEDPQTH+NRIYRMIKLGL        A++ SAAV +E+P
Sbjct: 541  SVKDLVILLYETALLSSGFSLEDPQTHANRIYRMIKLGL--------ADDSSAAVSEEMP 592

Query: 1818 PLEGDEDASRMEEVD 1862
            PLEGD+D SRMEEVD
Sbjct: 593  PLEGDDDTSRMEEVD 607


>ref|XP_850113.1| PREDICTED: similar to heat shock protein 1, beta [Canis familiaris].
          Length = 460

 Score =  711 bits (1835), Expect = 0.0
 Identities = 373/442 (84%), Positives = 382/442 (86%)
 Frame = +3

Query: 516  YIDQEELNKTKPIWTRNPDDITQEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFI 695
            YIDQEELNKTKP+WTRNPDDITQEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFR LL +
Sbjct: 7    YIDQEELNKTKPVWTRNPDDITQEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFRVLLIV 66

Query: 696  PRRAPFDLFENKKKKNNIKLYVRRVFIMDSCDELIPEYLNFIRGVVDSEDLPLNISREML 875
            P  APFDLFENKKKKN IKLYVR VFIMD CDELIPEYLNFIRGVVDSEDLPLNISREML
Sbjct: 67   PHWAPFDLFENKKKKN-IKLYVRHVFIMDGCDELIPEYLNFIRGVVDSEDLPLNISREML 125

Query: 876  QQSKILKVIRKNIVKKCLELFSELAEDKENYKKFYEAFSKNLKLGIHEDSTNRRRLSELL 1055
            QQSKILKVI KNIVKKCLELFSELAEDKENYKKF EAFSKNLKL IHEDSTN+R LSELL
Sbjct: 126  QQSKILKVICKNIVKKCLELFSELAEDKENYKKFCEAFSKNLKLRIHEDSTNQRCLSELL 185

Query: 1056 RYHTSQSGDEMTSLSEYVSRMKETQKSIYYITGESKEQVANSAFVERVRKRGFEVVYMTE 1235
             YHTSQSGDEMTSLSEYVS MKETQKSIYYITG+ KEQVANSAFVE+VRK GFE      
Sbjct: 186  CYHTSQSGDEMTSLSEYVSHMKETQKSIYYITGKCKEQVANSAFVEQVRKWGFE------ 239

Query: 1236 PIDEYCVQQLKEFDGKSLVSVTXXXXXXXXXXXXXXXXXXXXXXXXNLCKLMKEILDKKV 1415
                    QLKEFDGKSLVSVT                        NLCKLMKEILDKKV
Sbjct: 240  --------QLKEFDGKSLVSVTKEGLELPEDEEEKKKMEESKAKFENLCKLMKEILDKKV 291

Query: 1416 EKVTISNRLVSSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMMAKKHLEINPDHPIV 1595
            EKVTISNRLVSSPCCIVTSTYGWTANMERIMKAQAL DNST+GYMMAK HLEINP HPIV
Sbjct: 292  EKVTISNRLVSSPCCIVTSTYGWTANMERIMKAQALWDNSTVGYMMAKNHLEINPGHPIV 351

Query: 1596 ETLRQKAEADKNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNRIYRMIKLGLGIDEDEV 1775
            ETLRQKAEADKNDKAVKDLVVLL ETALLSSGFSLE+PQTHSNRIY  IKLGLGIDED+V
Sbjct: 352  ETLRQKAEADKNDKAVKDLVVLLLETALLSSGFSLENPQTHSNRIYSTIKLGLGIDEDQV 411

Query: 1776 TAEEPSAAVPDEIPPLEGDEDA 1841
            TAEEPSAAVPDEI PLEGDE+A
Sbjct: 412  TAEEPSAAVPDEILPLEGDENA 433


>ref|XP_532154.2| PREDICTED: similar to heat shock protein 1, beta isoform 1 [Canis
            familiaris].
          Length = 636

 Score =  538 bits (1385), Expect = e-152
 Identities = 278/334 (83%), Positives = 278/334 (83%)
 Frame = +3

Query: 3    IAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAEKVVVITKHNDDEQYAWESSAGGS 182
            IAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAEKVVVITKHNDDEQYAWESSAGGS
Sbjct: 105  IAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAEKVVVITKHNDDEQYAWESSAGGS 164

Query: 183  FTVRADHGEPIGRGTKVILHLKEDQTEYLEERRVKEVVKKHSQFIGYPITLYLEKXXXXX 362
            FTVRADHGEPIGRGTKVILHLKEDQTEYLEERRVKEVVKKHSQFIGYPITLYLEK     
Sbjct: 165  FTVRADHGEPIGRGTKVILHLKEDQTEYLEERRVKEVVKKHSQFIGYPITLYLEKEREKE 224

Query: 363  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYIDQEELNK 542
                                                               YIDQEELNK
Sbjct: 225  ISDDEAEEEKGEKEEEDKDDEEKPKIEDVGSDEEDDSGKDKKKKTKKIKEKYIDQEELNK 284

Query: 543  TKPIWTRNPDDITQEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFIPRRAPFDLF 722
            TKPIWTRNPDDITQEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFIPRRAPFDLF
Sbjct: 285  TKPIWTRNPDDITQEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFIPRRAPFDLF 344

Query: 723  ENKKKKNNIKLYVRRVFIMDSCDELIPEYLNFIRGVVDSEDLPLNISREMLQQSKILKVI 902
            ENKKKKNNIKLYVRRVFIMDSCDELIPEYLNFIRGVVDSEDLPLNISREMLQQSKILKVI
Sbjct: 345  ENKKKKNNIKLYVRRVFIMDSCDELIPEYLNFIRGVVDSEDLPLNISREMLQQSKILKVI 404

Query: 903  RKNIVKKCLELFSELAEDKENYKKFYEAFSKNLK 1004
            RKNIVKKCLELFSELAEDKENYKKFYEAFSKNLK
Sbjct: 405  RKNIVKKCLELFSELAEDKENYKKFYEAFSKNLK 438



 Score =  338 bits (866), Expect = 2e-92
 Identities = 175/202 (86%), Positives = 176/202 (87%)
 Frame = +3

Query: 1257 QQLKEFDGKSLVSVTXXXXXXXXXXXXXXXXXXXXXXXXNLCKLMKEILDKKVEKVTISN 1436
            + LKEFDGKSLVSVT                        NLCKLMKEILDKKVEKVTISN
Sbjct: 435  KNLKEFDGKSLVSVTKEGLELPEDEEEKKKMEESKAKFENLCKLMKEILDKKVEKVTISN 494

Query: 1437 RLVSSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMMAKKHLEINPDHPIVETLRQKA 1616
            RLVSSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMMAKKHLEINPDHPIVETLRQKA
Sbjct: 495  RLVSSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMMAKKHLEINPDHPIVETLRQKA 554

Query: 1617 EADKNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNRIYRMIKLGLGIDEDEVTAEEPSA 1796
            EADKNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNRIYRMIKLGLGIDEDEV AEEPSA
Sbjct: 555  EADKNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNRIYRMIKLGLGIDEDEVAAEEPSA 614

Query: 1797 AVPDEIPPLEGDEDASRMEEVD 1862
            AVPDEIPPLEGDEDASRMEEVD
Sbjct: 615  AVPDEIPPLEGDEDASRMEEVD 636


>ref|XP_848783.1| PREDICTED: similar to heat shock protein 1, alpha isoform 1 [Canis
            familiaris].
          Length = 483

 Score =  472 bits (1214), Expect = e-133
 Identities = 242/323 (74%), Positives = 257/323 (79%), Gaps = 4/323 (1%)
 Frame = +3

Query: 3    IAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAEKVVVITKHNDDEQYAWESSAGGS 182
            IAKSGTK FMEALQAGADISMIGQFGVGFYSAYLVAEKV VITKHNDD+QYAWESSAGGS
Sbjct: 110  IAKSGTKVFMEALQAGADISMIGQFGVGFYSAYLVAEKVTVITKHNDDKQYAWESSAGGS 169

Query: 183  FTVRADHGEPIGRGTKVILHLKEDQTEYLEERRVKEVVKKHSQFIGYPITLYL----EKX 350
            FTVR D GEP+GRGTKVILHLKEDQTEYLEERR+KE+VKKHSQFIGYPITL++    +K 
Sbjct: 170  FTVRTDTGEPMGRGTKVILHLKEDQTEYLEERRIKEIVKKHSQFIGYPITLFVEKERDKE 229

Query: 351  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYIDQE 530
                                                                   YIDQE
Sbjct: 230  VSDDEAEEKEEKEEEKEKEEKESDDKPEIEDVGSDEEEEEKKDGDKKKKKKIKEKYIDQE 289

Query: 531  ELNKTKPIWTRNPDDITQEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFIPRRAP 710
            ELNKTKPIWTRNPD+IT EEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFR LLF+PRRAP
Sbjct: 290  ELNKTKPIWTRNPDNITNEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFRDLLFVPRRAP 349

Query: 711  FDLFENKKKKNNIKLYVRRVFIMDSCDELIPEYLNFIRGVVDSEDLPLNISREMLQQSKI 890
            FDLFEN+KKKNNIKLYVRRVFIMD+C+ELIPEYLNFIRGVVDSEDLPLNISREMLQQSKI
Sbjct: 350  FDLFENRKKKNNIKLYVRRVFIMDNCEELIPEYLNFIRGVVDSEDLPLNISREMLQQSKI 409

Query: 891  LKVIRKNIVKKCLELFSELAEDK 959
            LKVIRKN+VKKCLELF+ELAED+
Sbjct: 410  LKVIRKNLVKKCLELFTELAEDR 432


>ref|XP_850290.1| PREDICTED: similar to heat shock protein 1, beta [Canis familiaris].
          Length = 369

 Score =  459 bits (1180), Expect = e-129
 Identities = 238/293 (81%), Positives = 248/293 (84%)
 Frame = +3

Query: 543  TKPIWTRNPDDITQEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFIPRRAPFDLF 722
            TKPIWTRNPDDITQEEYG FYKSLTNDWEDHLAVKHFSVEGQLEFRALLFIP RA     
Sbjct: 79   TKPIWTRNPDDITQEEYGVFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFIPHRALLTSL 138

Query: 723  ENKKKKNNIKLYVRRVFIMDSCDELIPEYLNFIRGVVDSEDLPLNISREMLQQSKILKVI 902
            + ++K+ +   YVR VFIMDS DELIPEYLNFI GVVDSEDLPLNISREMLQQSKILKVI
Sbjct: 139  KTRRKRTSN--YVRCVFIMDSGDELIPEYLNFIHGVVDSEDLPLNISREMLQQSKILKVI 196

Query: 903  RKNIVKKCLELFSELAEDKENYKKFYEAFSKNLKLGIHEDSTNRRRLSELLRYHTSQSGD 1082
             KNIVKKCLELFSELAEDKENYKKFYE FSKNLKLGIHEDSTNR RLSELLRYHTSQSGD
Sbjct: 197  HKNIVKKCLELFSELAEDKENYKKFYEVFSKNLKLGIHEDSTNRCRLSELLRYHTSQSGD 256

Query: 1083 EMTSLSEYVSRMKETQKSIYYITGESKEQVANSAFVERVRKRGFEVVYMTEPIDEYCVQQ 1262
            EMTSLSEYV  MKETQKSIYYITGE+K+QVANSAFVERVRKRGFEVVY TEPI+EYC+QQ
Sbjct: 257  EMTSLSEYVCHMKETQKSIYYITGETKQQVANSAFVERVRKRGFEVVYTTEPINEYCMQQ 316

Query: 1263 LKEFDGKSLVSVTXXXXXXXXXXXXXXXXXXXXXXXXNLCKLMKEILDKKVEK 1421
            LKEFDGKSLVSVT                        NLCKLMKEILDKKVE+
Sbjct: 317  LKEFDGKSLVSVTKEGLELPEDEEEEKKMEESKAKFENLCKLMKEILDKKVER 369



 Score =  123 bits (308), Expect = 8e-28
 Identities = 62/65 (95%), Positives = 63/65 (96%)
 Frame = +3

Query: 3   IAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAEKVVVITKHNDDEQYAWESSAGGS 182
           IAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVA+KVVVITKHN DEQYAWESSAGGS
Sbjct: 13  IAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVADKVVVITKHNVDEQYAWESSAGGS 72

Query: 183 FTVRA 197
           FTV A
Sbjct: 73  FTVLA 77


>ref|XP_857137.1| PREDICTED: similar to Heat shock protein HSP 90-alpha (HSP 86)
            isoform 3 [Canis familiaris].
          Length = 543

 Score =  442 bits (1137), Expect = e-124
 Identities = 218/292 (74%), Positives = 248/292 (84%)
 Frame = +3

Query: 948  AEDKENYKKFYEAFSKNLKLGIHEDSTNRRRLSELLRYHTSQSGDEMTSLSEYVSRMKET 1127
            ++DK  YKKFY+ FSKN+KLGIHEDS NR++LSELLRY+TS SGDEM SL +Y +RMKE 
Sbjct: 252  SDDKPEYKKFYKQFSKNIKLGIHEDSQNRKKLSELLRYYTSASGDEMVSLKDYCTRMKEN 311

Query: 1128 QKSIYYITGESKEQVANSAFVERVRKRGFEVVYMTEPIDEYCVQQLKEFDGKSLVSVTXX 1307
            QK IYYITGE+K+QVANSAFVER+RK G EV+YM EPIDEYCVQQLKEF+GK+LVSVT  
Sbjct: 312  QKHIYYITGETKDQVANSAFVERLRKHGLEVIYMIEPIDEYCVQQLKEFEGKTLVSVTKE 371

Query: 1308 XXXXXXXXXXXXXXXXXXXXXXNLCKLMKEILDKKVEKVTISNRLVSSPCCIVTSTYGWT 1487
                                  NLCK+MK+IL+KKVEKV +SNRLV+SPCCIVTSTYGWT
Sbjct: 372  GLELPEDEEEKKKQEEKKTKFENLCKIMKDILEKKVEKVVVSNRLVTSPCCIVTSTYGWT 431

Query: 1488 ANMERIMKAQALRDNSTMGYMMAKKHLEINPDHPIVETLRQKAEADKNDKAVKDLVVLLF 1667
            ANMERIMKAQALRDNSTMGYM AKKHLEINPDH I+ETLRQKAEADKNDK+VKDLV+LL+
Sbjct: 432  ANMERIMKAQALRDNSTMGYMAAKKHLEINPDHSIIETLRQKAEADKNDKSVKDLVILLY 491

Query: 1668 ETALLSSGFSLEDPQTHSNRIYRMIKLGLGIDEDEVTAEEPSAAVPDEIPPL 1823
            ETALLSS FSLEDPQTH+NRIYRMIKLGLGIDED+ TA++ SAAV +E+PPL
Sbjct: 492  ETALLSSSFSLEDPQTHANRIYRMIKLGLGIDEDDPTADDSSAAVSEEMPPL 543



 Score =  216 bits (551), Expect = 5e-56
 Identities = 105/115 (91%), Positives = 111/115 (96%)
 Frame = +3

Query: 3   IAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAEKVVVITKHNDDEQYAWESSAGGS 182
           IAKSGTK FMEALQAGADISMIGQFGVGFYSAYLVAEKV VITKHNDD+QYAWESSAGGS
Sbjct: 110 IAKSGTKVFMEALQAGADISMIGQFGVGFYSAYLVAEKVTVITKHNDDKQYAWESSAGGS 169

Query: 183 FTVRADHGEPIGRGTKVILHLKEDQTEYLEERRVKEVVKKHSQFIGYPITLYLEK 347
           FTVR D GEP+GRGTKVILHLKEDQTEYLEERR+KE+VKKHSQFIGYPITL++EK
Sbjct: 170 FTVRTDTGEPMGRGTKVILHLKEDQTEYLEERRIKEIVKKHSQFIGYPITLFVEK 224


>ref|XP_868585.1| PREDICTED: similar to Heat shock protein HSP 90-alpha (HSP 86)
            isoform 2 [Canis familiaris].
          Length = 469

 Score =  397 bits (1019), Expect = e-110
 Identities = 208/324 (64%), Positives = 242/324 (74%), Gaps = 4/324 (1%)
 Frame = +3

Query: 903  RKNIVKKCLELFSELAEDKENYKKFYEAFSKNLKLGIHEDSTNRRRLSELLRYHTSQSGD 1082
            +K+  KK  +   E   D+E   K    +++N       D        E  +  T+   D
Sbjct: 152  KKDGDKKKKKKIKEKYIDQEELNKTKPIWTRN------PDDITNEEYGEFYKSLTNDWED 205

Query: 1083 ----EMTSLSEYVSRMKETQKSIYYITGESKEQVANSAFVERVRKRGFEVVYMTEPIDEY 1250
                +M SL +Y +RMKE QK IYYITGE+K+QVANSAFVER+RK G EV+YM EPIDEY
Sbjct: 206  HLAVKMVSLKDYCTRMKENQKHIYYITGETKDQVANSAFVERLRKHGLEVIYMIEPIDEY 265

Query: 1251 CVQQLKEFDGKSLVSVTXXXXXXXXXXXXXXXXXXXXXXXXNLCKLMKEILDKKVEKVTI 1430
            CVQQLKEF+GK+LVSVT                        NLCK+MK+IL+KKVEKV +
Sbjct: 266  CVQQLKEFEGKTLVSVTKEGLELPEDEEEKKKQEEKKTKFENLCKIMKDILEKKVEKVVV 325

Query: 1431 SNRLVSSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMMAKKHLEINPDHPIVETLRQ 1610
            SNRLV+SPCCIVTSTYGWTANMERIMKAQALRDNSTMGYM AKKHLEINPDH I+ETLRQ
Sbjct: 326  SNRLVTSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMAAKKHLEINPDHSIIETLRQ 385

Query: 1611 KAEADKNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNRIYRMIKLGLGIDEDEVTAEEP 1790
            KAEADKNDK+VKDLV+LL+ETALLSSGFSLEDPQTH+NRIYRMIKLGLGIDED+ TA++ 
Sbjct: 386  KAEADKNDKSVKDLVILLYETALLSSGFSLEDPQTHANRIYRMIKLGLGIDEDDPTADDS 445

Query: 1791 SAAVPDEIPPLEGDEDASRMEEVD 1862
            SAAV +E+PPLEGD+D SRMEEVD
Sbjct: 446  SAAVSEEMPPLEGDDDTSRMEEVD 469



 Score =  268 bits (686), Expect = 1e-71
 Identities = 141/215 (65%), Positives = 149/215 (69%), Gaps = 4/215 (1%)
 Frame = +3

Query: 30  MEALQAGADISMIGQFGVGFYSAYLVAEKVVVITKHNDDEQYAWESSAGGSFTVRADHGE 209
           MEALQAGADISMIGQFGVGFYSAYLVAEKV VITKHNDDEQYAWESSAGGSFTVR D GE
Sbjct: 1   MEALQAGADISMIGQFGVGFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDTGE 60

Query: 210 PIGRGTKVILHLKEDQTEYLEERRVKEVVKKHSQFIGYPITLYL----EKXXXXXXXXXX 377
           P+GRGTKVILHLKEDQTEYLEERR+KE+VKKHSQFIGYPITL++    +K          
Sbjct: 61  PMGRGTKVILHLKEDQTEYLEERRIKEIVKKHSQFIGYPITLFVEKERDKEVSDDEAEEK 120

Query: 378 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYIDQEELNKTKPIW 557
                                                         YIDQEELNKTKPIW
Sbjct: 121 EEKEEEKEKKEKESDDKPEIEDVGSDEEEEEKKDGDKKKKKKIKEKYIDQEELNKTKPIW 180

Query: 558 TRNPDDITQEEYGEFYKSLTNDWEDHLAVKHFSVE 662
           TRNPDDIT EEYGEFYKSLTNDWEDHLAVK  S++
Sbjct: 181 TRNPDDITNEEYGEFYKSLTNDWEDHLAVKMVSLK 215


>ref|NP_001003327.1| endoplasmin precursor [Canis lupus familiaris].
          Length = 804

 Score =  395 bits (1016), Expect = e-110
 Identities = 203/453 (44%), Positives = 288/453 (63%), Gaps = 6/453 (1%)
 Frame = +3

Query: 522  DQEELNKTKPIWTRNPDDITQEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFIPR 701
            D E +N  KPIW R   ++  +EY  FYKS + + +D +A  HF+ EG++ F+++LF+P 
Sbjct: 332  DWELMNDIKPIWQRPSKEVEDDEYKAFYKSFSKESDDPMAYIHFTAEGEVTFKSILFVPT 391

Query: 702  RAPFDLFEN--KKKKNNIKLYVRRVFIMDSCDELIPEYLNFIRGVVDSEDLPLNISREML 875
             AP  LF+    KK + IKLYVRRVFI D   +++P+YLNF++GVVDS+DLPLN+SRE L
Sbjct: 392  SAPRGLFDEYGSKKSDYIKLYVRRVFITDDFHDMMPKYLNFVKGVVDSDDLPLNVSRETL 451

Query: 876  QQSKILKVIRKNIVKKCLELFSELAEDKENYKKFYEAFSKNLKLGIHEDSTNRRRLSELL 1055
            QQ K+LKVIRK +V+K L++  ++A++K N   F++ F  N+KLG+ ED +NR RL++LL
Sbjct: 452  QQHKLLKVIRKKLVRKTLDMIKKIADEKYN-DTFWKEFGTNIKLGVIEDHSNRTRLAKLL 510

Query: 1056 RYHTSQSGDEMTSLSEYVSRMKETQKSIYYITGESKEQVANSAFVERVRKRGFEVVYMTE 1235
            R+ +S    ++TSL +YV RMKE Q  IY++ G S+++  +S FVER+ K+G+EV+Y+TE
Sbjct: 511  RFQSSHHPSDITSLDQYVERMKEKQDKIYFMAGSSRKEAESSPFVERLLKKGYEVIYLTE 570

Query: 1236 PIDEYCVQQLKEFDGKSLVSVTXXXXXXXXXXXXXXXXXXXXXXXXNLCKLMKE-ILDKK 1412
            P+DEYC+Q L EFDGK   +V                          L   MK+  L  K
Sbjct: 571  PVDEYCIQALPEFDGKRFQNVAKEGVKFDESEKTKESREAIEKEFEPLLNWMKDKALKDK 630

Query: 1413 VEKVTISNRLVSSPCCIVTSTYGWTANMERIMKAQAL---RDNSTMGYMMAKKHLEINPD 1583
            +EK  +S RL  SPC +V S YGW+ NMERIMKAQA    +D ST  Y   KK  EINP 
Sbjct: 631  IEKAVVSQRLTESPCALVASQYGWSGNMERIMKAQAYQTGKDISTNYYASQKKTFEINPR 690

Query: 1584 HPIVETLRQKAEADKNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNRIYRMIKLGLGID 1763
            HP+++ + ++ + D++DK V DL V+LFETA L SG+ L D + + +RI RM++L L ID
Sbjct: 691  HPLIKDMLRRVKEDEDDKTVSDLAVVLFETATLRSGYLLPDTKAYGDRIERMLRLSLNID 750

Query: 1764 EDEVTAEEPSAAVPDEIPPLEGDEDASRMEEVD 1862
             D    EEP     +       D +    EE+D
Sbjct: 751  PDAKVEEEPEEEPEETTEDTTEDTEQDDEEEMD 783



 Score =  113 bits (283), Expect = 6e-25
 Identities = 63/121 (52%), Positives = 85/121 (70%), Gaps = 6/121 (4%)
 Frame = +3

Query: 3   IAKSGTKAFM----EALQAGADIS-MIGQFGVGFYSAYLVAEKVVVITKHNDDEQYAWES 167
           IAKSGT  F+    EA + G   S +IGQFGVGFYSA+LVA+KV+V +KHN+D Q+ WES
Sbjct: 166 IAKSGTSEFLNKMTEAQEDGQSTSELIGQFGVGFYSAFLVADKVIVTSKHNNDTQHIWES 225

Query: 168 SAGGSFTVRAD-HGEPIGRGTKVILHLKEDQTEYLEERRVKEVVKKHSQFIGYPITLYLE 344
            +   F+V AD  G  +GRGT + L LKE+ ++YLE   +K +VKK+SQFI +PI ++  
Sbjct: 226 DS-NEFSVIADPRGNTLGRGTTITLVLKEEASDYLELDTIKNLVKKYSQFINFPIYVWSS 284

Query: 345 K 347
           K
Sbjct: 285 K 285


>ref|XP_866014.1| PREDICTED: similar to heat shock protein HSP 90-beta isoform 4 [Canis
            familiaris].
          Length = 503

 Score =  385 bits (990), Expect = e-107
 Identities = 201/237 (84%), Positives = 205/237 (86%), Gaps = 1/237 (0%)
 Frame = +3

Query: 1155 ESKEQVAN-SAFVERVRKRGFEVVYMTEPIDEYCVQQLKEFDGKSLVSVTXXXXXXXXXX 1331
            E+K++  N   +V  VRKRGFEVVYMTEPIDEYCVQQLKEFDGKSLVSVT          
Sbjct: 267  ENKKKKNNIKLYVRLVRKRGFEVVYMTEPIDEYCVQQLKEFDGKSLVSVTKEGLELPEDE 326

Query: 1332 XXXXXXXXXXXXXXNLCKLMKEILDKKVEKVTISNRLVSSPCCIVTSTYGWTANMERIMK 1511
                          NLCKLMKEILDKKVEKVTISNRLVSSPCCIVTSTYGWTANMERIMK
Sbjct: 327  EEKKKMEESKAKFENLCKLMKEILDKKVEKVTISNRLVSSPCCIVTSTYGWTANMERIMK 386

Query: 1512 AQALRDNSTMGYMMAKKHLEINPDHPIVETLRQKAEADKNDKAVKDLVVLLFETALLSSG 1691
            AQALRDNSTMGYMMAKKHLEINPDHPIVETLRQKAEADKNDKAVKDLVVLLFETALLSSG
Sbjct: 387  AQALRDNSTMGYMMAKKHLEINPDHPIVETLRQKAEADKNDKAVKDLVVLLFETALLSSG 446

Query: 1692 FSLEDPQTHSNRIYRMIKLGLGIDEDEVTAEEPSAAVPDEIPPLEGDEDASRMEEVD 1862
            FSLEDPQTHSNRIYRMIKLGLGIDEDEV AEEPSAAVPDEIPPLEGDEDASRMEEVD
Sbjct: 447  FSLEDPQTHSNRIYRMIKLGLGIDEDEVAAEEPSAAVPDEIPPLEGDEDASRMEEVD 503



 Score =  223 bits (569), Expect = 4e-58
 Identities = 131/247 (53%), Positives = 142/247 (57%), Gaps = 12/247 (4%)
 Frame = +3

Query: 249 EDQTEYLEERRVKEVVKKHSQFIGYPITLYLEKXXXXXXXXXXXXXXXXXXXXXXXXXXX 428
           EDQTEYLEERRVKEVVKKHSQFIGYPITLYLEK                           
Sbjct: 109 EDQTEYLEERRVKEVVKKHSQFIGYPITLYLEKEREKEISDDEAEEEKGEKEEEDKDDEE 168

Query: 429 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXYIDQEELNKTKPIWTRNPDDITQEEYGEFYK 608
                                        YIDQEELNKTKPIWTRNPDDITQEEYGEFYK
Sbjct: 169 KPKIEDVGSDEEDDSGKDKKKKTKKIKEKYIDQEELNKTKPIWTRNPDDITQEEYGEFYK 228

Query: 609 SLTNDWEDHLAVKHFSVEGQLEFRALLFIPRRAPFDLFENKKKKNNIKLYVRR------- 767
           SLTNDWEDHLAVKHFSVEGQLEFRALLFIPRRAPFDLFENKKKKNNIKLYVR        
Sbjct: 229 SLTNDWEDHLAVKHFSVEGQLEFRALLFIPRRAPFDLFENKKKKNNIKLYVRLVRKRGFE 288

Query: 768 -VFIMDSCDELIPEYLNFIRG----VVDSEDLPLNISREMLQQSKILKVIRKNIVKKCLE 932
            V++ +  DE   + L    G     V  E L L    E  ++ +  K   +N+ K   E
Sbjct: 289 VVYMTEPIDEYCVQQLKEFDGKSLVSVTKEGLELPEDEEEKKKMEESKAKFENLCKLMKE 348

Query: 933 LFSELAE 953
           +  +  E
Sbjct: 349 ILDKKVE 355


  Database: RefSeq49_CP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,874,504
  Number of sequences in database:  33,336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 75,296,728
Number of extensions: 1873119
Number of successful extensions: 5815
Number of sequences better than 1.0e-05: 24
Number of HSP's gapped: 5784
Number of HSP's successfully gapped: 45
Length of query: 715
Length of database: 18,874,504
Length adjustment: 110
Effective length of query: 605
Effective length of database: 15,207,544
Effective search space: 9200564120
Effective search space used: 9200564120
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-001874
         (2145 letters)

Database: RefSeq49_HP.fasta 
           32,964 sequences; 18,297,164 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_031381.2| heat shock protein HSP 90-beta [Homo sapiens].      1038   0.0  
Alignment   gi|NP_005339.3| heat shock protein HSP 90-alpha isoform 2 [Homo...   757   0.0  
Alignment   gi|NP_001017963.2| heat shock protein HSP 90-alpha isoform 1 [H...   757   0.0  
Alignment   gi|NP_003290.1| endoplasmin precursor [Homo sapiens].                397   e-110
Alignment   gi|NP_057376.2| heat shock protein 75 kDa, mitochondrial precur...   184   4e-46

>ref|NP_031381.2| heat shock protein HSP 90-beta [Homo sapiens].
          Length = 724

 Score = 1038 bits (2684), Expect = 0.0
 Identities = 538/620 (86%), Positives = 539/620 (86%)
 Frame = +3

Query: 3    IAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAEKVVVITKHNDDEQYAWESSAGGS 182
            IAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAEKVVVITKHNDDEQYAWESSAGGS
Sbjct: 105  IAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAEKVVVITKHNDDEQYAWESSAGGS 164

Query: 183  FTVRADHGEPIGRGTKVILHLKEDQTEYLEERRVKEVVKKHSQFIGYPITLYLEKXXXXX 362
            FTVRADHGEPIGRGTKVILHLKEDQTEYLEERRVKEVVKKHSQFIGYPITLYLEK     
Sbjct: 165  FTVRADHGEPIGRGTKVILHLKEDQTEYLEERRVKEVVKKHSQFIGYPITLYLEKEREKE 224

Query: 363  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYIDQEELNK 542
                                                               YIDQEELNK
Sbjct: 225  ISDDEAEEEKGEKEEEDKDDEEKPKIEDVGSDEEDDSGKDKKKKTKKIKEKYIDQEELNK 284

Query: 543  TKPIWTRNPDDITQEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFIPRRAPFDLF 722
            TKPIWTRNPDDITQEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFIPRRAPFDLF
Sbjct: 285  TKPIWTRNPDDITQEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFIPRRAPFDLF 344

Query: 723  ENKKKKNNIKLYVRRVFIMDSCDELIPEYLNFIRGVVDSEDLPLNISREMLQQSKILKVI 902
            ENKKKKNNIKLYVRRVFIMDSCDELIPEYLNFIRGVVDSEDLPLNISREMLQQSKILKVI
Sbjct: 345  ENKKKKNNIKLYVRRVFIMDSCDELIPEYLNFIRGVVDSEDLPLNISREMLQQSKILKVI 404

Query: 903  RKNIVKKCLELFSELAEDKENYKKFYEAFSKNLKLGIHEDSTNRRRLSELLRYHTSQSGD 1082
            RKNIVKKCLELFSELAEDKENYKKFYEAFSKNLKLGIHEDSTNRRRLSELLRYHTSQSGD
Sbjct: 405  RKNIVKKCLELFSELAEDKENYKKFYEAFSKNLKLGIHEDSTNRRRLSELLRYHTSQSGD 464

Query: 1083 EMTSLSEYVSRMKETQKSIYYITGESKEQVANSAFVERVRKRGFEVVYMTEPIDEYCVQQ 1262
            EMTSLSEYVSRMKETQKSIYYITGESKEQVANSAFVERVRKRGFEVVYMTEPIDEYCVQQ
Sbjct: 465  EMTSLSEYVSRMKETQKSIYYITGESKEQVANSAFVERVRKRGFEVVYMTEPIDEYCVQQ 524

Query: 1263 LKEFDGKSLVSVTXXXXXXXXXXXXXXXXXXXXXXXXNLCKLMKEILDKKVEKVTISNRL 1442
            LKEFDGKSLVSVT                        NLCKLMKEILDKKVEKVTISNRL
Sbjct: 525  LKEFDGKSLVSVTKEGLELPEDEEEKKKMEESKAKFENLCKLMKEILDKKVEKVTISNRL 584

Query: 1443 VSSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMMAKKHLEINPDHPIVETLRQKAEA 1622
            VSSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMMAKKHLEINPDHPIVETLRQKAEA
Sbjct: 585  VSSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMMAKKHLEINPDHPIVETLRQKAEA 644

Query: 1623 DKNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNRIYRMIKLGLGIDEDEVTAEEPSAAV 1802
            DKNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNRIYRMIKLGLGIDEDEV AEEP+AAV
Sbjct: 645  DKNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNRIYRMIKLGLGIDEDEVAAEEPNAAV 704

Query: 1803 PDEIPPLEGDEDASRMEEVD 1862
            PDEIPPLEGDEDASRMEEVD
Sbjct: 705  PDEIPPLEGDEDASRMEEVD 724


>ref|NP_005339.3| heat shock protein HSP 90-alpha isoform 2 [Homo sapiens].
          Length = 732

 Score =  757 bits (1955), Expect = 0.0
 Identities = 372/449 (82%), Positives = 406/449 (90%)
 Frame = +3

Query: 516  YIDQEELNKTKPIWTRNPDDITQEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFI 695
            YIDQEELNKTKPIWTRNPDDIT EEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLF+
Sbjct: 284  YIDQEELNKTKPIWTRNPDDITNEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFV 343

Query: 696  PRRAPFDLFENKKKKNNIKLYVRRVFIMDSCDELIPEYLNFIRGVVDSEDLPLNISREML 875
            PRRAPFDLFEN+KKKNNIKLYVRRVFIMD+C+ELIPEYLNFIRGVVDSEDLPLNISREML
Sbjct: 344  PRRAPFDLFENRKKKNNIKLYVRRVFIMDNCEELIPEYLNFIRGVVDSEDLPLNISREML 403

Query: 876  QQSKILKVIRKNIVKKCLELFSELAEDKENYKKFYEAFSKNLKLGIHEDSTNRRRLSELL 1055
            QQSKILKVIRKN+VKKCLELF+ELAEDKENYKKFYE FSKN+KLGIHEDS NR++LSELL
Sbjct: 404  QQSKILKVIRKNLVKKCLELFTELAEDKENYKKFYEQFSKNIKLGIHEDSQNRKKLSELL 463

Query: 1056 RYHTSQSGDEMTSLSEYVSRMKETQKSIYYITGESKEQVANSAFVERVRKRGFEVVYMTE 1235
            RY+TS SGDEM SL +Y +RMKE QK IYYITGE+K+QVANSAFVER+RK G EV+YM E
Sbjct: 464  RYYTSASGDEMVSLKDYCTRMKENQKHIYYITGETKDQVANSAFVERLRKHGLEVIYMIE 523

Query: 1236 PIDEYCVQQLKEFDGKSLVSVTXXXXXXXXXXXXXXXXXXXXXXXXNLCKLMKEILDKKV 1415
            PIDEYCVQQLKEF+GK+LVSVT                        NLCK+MK+IL+KKV
Sbjct: 524  PIDEYCVQQLKEFEGKTLVSVTKEGLELPEDEEEKKKQEEKKTKFENLCKIMKDILEKKV 583

Query: 1416 EKVTISNRLVSSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMMAKKHLEINPDHPIV 1595
            EKV +SNRLV+SPCCIVTSTYGWTANMERIMKAQALRDNSTMGYM AKKHLEINPDH I+
Sbjct: 584  EKVVVSNRLVTSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMAAKKHLEINPDHSII 643

Query: 1596 ETLRQKAEADKNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNRIYRMIKLGLGIDEDEV 1775
            ETLRQKAEADKNDK+VKDLV+LL+ETALLSSGFSLEDPQTH+NRIYRMIKLGLGIDED+ 
Sbjct: 644  ETLRQKAEADKNDKSVKDLVILLYETALLSSGFSLEDPQTHANRIYRMIKLGLGIDEDDP 703

Query: 1776 TAEEPSAAVPDEIPPLEGDEDASRMEEVD 1862
            TA++ SAAV +E+PPLEGD+D SRMEEVD
Sbjct: 704  TADDTSAAVTEEMPPLEGDDDTSRMEEVD 732



 Score =  219 bits (559), Expect = 6e-57
 Identities = 107/115 (93%), Positives = 112/115 (97%)
 Frame = +3

Query: 3   IAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAEKVVVITKHNDDEQYAWESSAGGS 182
           IAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAEKV VITKHNDDEQYAWESSAGGS
Sbjct: 110 IAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAEKVTVITKHNDDEQYAWESSAGGS 169

Query: 183 FTVRADHGEPIGRGTKVILHLKEDQTEYLEERRVKEVVKKHSQFIGYPITLYLEK 347
           FTVR D GEP+GRGTKVILHLKEDQTEYLEERR+KE+VKKHSQFIGYPITL++EK
Sbjct: 170 FTVRTDTGEPMGRGTKVILHLKEDQTEYLEERRIKEIVKKHSQFIGYPITLFVEK 224


>ref|NP_001017963.2| heat shock protein HSP 90-alpha isoform 1 [Homo sapiens].
          Length = 854

 Score =  757 bits (1955), Expect = 0.0
 Identities = 372/449 (82%), Positives = 406/449 (90%)
 Frame = +3

Query: 516  YIDQEELNKTKPIWTRNPDDITQEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFI 695
            YIDQEELNKTKPIWTRNPDDIT EEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLF+
Sbjct: 406  YIDQEELNKTKPIWTRNPDDITNEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFV 465

Query: 696  PRRAPFDLFENKKKKNNIKLYVRRVFIMDSCDELIPEYLNFIRGVVDSEDLPLNISREML 875
            PRRAPFDLFEN+KKKNNIKLYVRRVFIMD+C+ELIPEYLNFIRGVVDSEDLPLNISREML
Sbjct: 466  PRRAPFDLFENRKKKNNIKLYVRRVFIMDNCEELIPEYLNFIRGVVDSEDLPLNISREML 525

Query: 876  QQSKILKVIRKNIVKKCLELFSELAEDKENYKKFYEAFSKNLKLGIHEDSTNRRRLSELL 1055
            QQSKILKVIRKN+VKKCLELF+ELAEDKENYKKFYE FSKN+KLGIHEDS NR++LSELL
Sbjct: 526  QQSKILKVIRKNLVKKCLELFTELAEDKENYKKFYEQFSKNIKLGIHEDSQNRKKLSELL 585

Query: 1056 RYHTSQSGDEMTSLSEYVSRMKETQKSIYYITGESKEQVANSAFVERVRKRGFEVVYMTE 1235
            RY+TS SGDEM SL +Y +RMKE QK IYYITGE+K+QVANSAFVER+RK G EV+YM E
Sbjct: 586  RYYTSASGDEMVSLKDYCTRMKENQKHIYYITGETKDQVANSAFVERLRKHGLEVIYMIE 645

Query: 1236 PIDEYCVQQLKEFDGKSLVSVTXXXXXXXXXXXXXXXXXXXXXXXXNLCKLMKEILDKKV 1415
            PIDEYCVQQLKEF+GK+LVSVT                        NLCK+MK+IL+KKV
Sbjct: 646  PIDEYCVQQLKEFEGKTLVSVTKEGLELPEDEEEKKKQEEKKTKFENLCKIMKDILEKKV 705

Query: 1416 EKVTISNRLVSSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMMAKKHLEINPDHPIV 1595
            EKV +SNRLV+SPCCIVTSTYGWTANMERIMKAQALRDNSTMGYM AKKHLEINPDH I+
Sbjct: 706  EKVVVSNRLVTSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMAAKKHLEINPDHSII 765

Query: 1596 ETLRQKAEADKNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNRIYRMIKLGLGIDEDEV 1775
            ETLRQKAEADKNDK+VKDLV+LL+ETALLSSGFSLEDPQTH+NRIYRMIKLGLGIDED+ 
Sbjct: 766  ETLRQKAEADKNDKSVKDLVILLYETALLSSGFSLEDPQTHANRIYRMIKLGLGIDEDDP 825

Query: 1776 TAEEPSAAVPDEIPPLEGDEDASRMEEVD 1862
            TA++ SAAV +E+PPLEGD+D SRMEEVD
Sbjct: 826  TADDTSAAVTEEMPPLEGDDDTSRMEEVD 854



 Score =  219 bits (559), Expect = 6e-57
 Identities = 107/115 (93%), Positives = 112/115 (97%)
 Frame = +3

Query: 3   IAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAEKVVVITKHNDDEQYAWESSAGGS 182
           IAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAEKV VITKHNDDEQYAWESSAGGS
Sbjct: 232 IAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAEKVTVITKHNDDEQYAWESSAGGS 291

Query: 183 FTVRADHGEPIGRGTKVILHLKEDQTEYLEERRVKEVVKKHSQFIGYPITLYLEK 347
           FTVR D GEP+GRGTKVILHLKEDQTEYLEERR+KE+VKKHSQFIGYPITL++EK
Sbjct: 292 FTVRTDTGEPMGRGTKVILHLKEDQTEYLEERRIKEIVKKHSQFIGYPITLFVEK 346


>ref|NP_003290.1| endoplasmin precursor [Homo sapiens].
          Length = 803

 Score =  397 bits (1020), Expect = e-110
 Identities = 209/457 (45%), Positives = 291/457 (63%), Gaps = 10/457 (2%)
 Frame = +3

Query: 522  DQEELNKTKPIWTRNPDDITQEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFIPR 701
            D E +N  KPIW R   ++ ++EY  FYKS + + +D +A  HF+ EG++ F+++LF+P 
Sbjct: 332  DWELMNDIKPIWQRPSKEVEEDEYKAFYKSFSKESDDPMAYIHFTAEGEVTFKSILFVPT 391

Query: 702  RAPFDLFEN--KKKKNNIKLYVRRVFIMDSCDELIPEYLNFIRGVVDSEDLPLNISREML 875
             AP  LF+    KK + IKLYVRRVFI D   +++P+YLNF++GVVDS+DLPLN+SRE L
Sbjct: 392  SAPRGLFDEYGSKKSDYIKLYVRRVFITDDFHDMMPKYLNFVKGVVDSDDLPLNVSRETL 451

Query: 876  QQSKILKVIRKNIVKKCLELFSELAEDKENYKKFYEAFSKNLKLGIHEDSTNRRRLSELL 1055
            QQ K+LKVIRK +V+K L++  ++A+DK N   F++ F  N+KLG+ ED +NR RL++LL
Sbjct: 452  QQHKLLKVIRKKLVRKTLDMIKKIADDKYN-DTFWKEFGTNIKLGVIEDHSNRTRLAKLL 510

Query: 1056 RYHTSQSGDEMTSLSEYVSRMKETQKSIYYITGESKEQVANSAFVERVRKRGFEVVYMTE 1235
            R+ +S    ++TSL +YV RMKE Q  IY++ G S+++  +S FVER+ K+G+EV+Y+TE
Sbjct: 511  RFQSSHHPTDITSLDQYVERMKEKQDKIYFMAGSSRKEAESSPFVERLLKKGYEVIYLTE 570

Query: 1236 PIDEYCVQQLKEFDGKSLVSVTXXXXXXXXXXXXXXXXXXXXXXXXNLCKLMKE-ILDKK 1412
            P+DEYC+Q L EFDGK   +V                          L   MK+  L  K
Sbjct: 571  PVDEYCIQALPEFDGKRFQNVAKEGVKFDESEKTKESREAVEKEFEPLLNWMKDKALKDK 630

Query: 1413 VEKVTISNRLVSSPCCIVTSTYGWTANMERIMKAQAL---RDNSTMGYMMAKKHLEINPD 1583
            +EK  +S RL  SPC +V S YGW+ NMERIMKAQA    +D ST  Y   KK  EINP 
Sbjct: 631  IEKAVVSQRLTESPCALVASQYGWSGNMERIMKAQAYQTGKDISTNYYASQKKTFEINPR 690

Query: 1584 HPIVETLRQKAEADKNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNRIYRMIKLGLGID 1763
            HP++  + ++ + D++DK V DL V+LFETA L SG+ L D + + +RI RM++L L ID
Sbjct: 691  HPLIRDMLRRIKEDEDDKTVLDLAVVLFETATLRSGYLLPDTKAYGDRIERMLRLSLNID 750

Query: 1764 ED----EVTAEEPSAAVPDEIPPLEGDEDASRMEEVD 1862
             D    E   EEP     D     E DED    EE+D
Sbjct: 751  PDAKVEEEPEEEPEETAEDTTEDTEQDED----EEMD 783



 Score =  113 bits (283), Expect = 6e-25
 Identities = 63/121 (52%), Positives = 85/121 (70%), Gaps = 6/121 (4%)
 Frame = +3

Query: 3   IAKSGTKAFM----EALQAGADIS-MIGQFGVGFYSAYLVAEKVVVITKHNDDEQYAWES 167
           IAKSGT  F+    EA + G   S +IGQFGVGFYSA+LVA+KV+V +KHN+D Q+ WES
Sbjct: 166 IAKSGTSEFLNKMTEAQEDGQSTSELIGQFGVGFYSAFLVADKVIVTSKHNNDTQHIWES 225

Query: 168 SAGGSFTVRAD-HGEPIGRGTKVILHLKEDQTEYLEERRVKEVVKKHSQFIGYPITLYLE 344
            +   F+V AD  G  +GRGT + L LKE+ ++YLE   +K +VKK+SQFI +PI ++  
Sbjct: 226 DS-NEFSVIADPRGNTLGRGTTITLVLKEEASDYLELDTIKNLVKKYSQFINFPIYVWSS 284

Query: 345 K 347
           K
Sbjct: 285 K 285


>ref|NP_057376.2| heat shock protein 75 kDa, mitochondrial precursor [Homo sapiens].
          Length = 704

 Score =  184 bits (466), Expect = 4e-46
 Identities = 109/418 (26%), Positives = 215/418 (51%), Gaps = 9/418 (2%)
 Frame = +3

Query: 516  YIDQEELNKTKPIWTRNPDDITQEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFI 695
            Y++   +N  + IW  +P D+ + ++ EFY+ +    +      H+  +  L  R++ ++
Sbjct: 286  YLNGRRMNTLQAIWMMDPKDVREWQHEEFYRYVAQAHDKPRYTLHYKTDAPLNIRSIFYV 345

Query: 696  PRRAPFDLFENKKKKNNIKLYVRRVFIMDSCDELIPEYLNFIRGVVDSEDLPLNISREML 875
            P   P     +++  +++ LY R+V I     +++P++L FIRGVVDSED+PLN+SRE+L
Sbjct: 346  PDMKPSMFDVSRELGSSVALYSRKVLIQTKATDILPKWLRFIRGVVDSEDIPLNLSRELL 405

Query: 876  QQSKILKVIRKNIVKKCLELFSELAE-DKENYKKFYEAFSKNLKLGI--HEDSTNRRRLS 1046
            Q+S +++ +R  + ++ ++ F + ++ D E Y KF+E +   ++ GI    +   +  ++
Sbjct: 406  QESALIRKLRDVLQQRLIKFFIDQSKKDAEKYAKFFEDYGLFMREGIVTATEQEVKEDIA 465

Query: 1047 ELLRYHTSQ-SGDEMTSLSEYVSRMKETQKSIYYITGESKEQVANSAFVERVRKRGFEVV 1223
            +LLRY +S     ++TSLSEY SRM+   ++IYY+   ++    +S + E ++K+  EV+
Sbjct: 466  KLLRYESSALPSGQLTSLSEYASRMRAGTRNIYYLCAPNRHLAEHSPYYEAMKKKDTEVL 525

Query: 1224 YMTEPIDEYCVQQLKEFDGKSLVSV-----TXXXXXXXXXXXXXXXXXXXXXXXXNLCKL 1388
            +  E  DE  +  L+EFD K L+SV                               L   
Sbjct: 526  FCFEQFDELTLLHLREFDKKKLISVETDIVVDHYKEEKFEDRSPAAECLSEKETEELMAW 585

Query: 1389 MKEILDKKVEKVTISNRLVSSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMMAKKHL 1568
            M+ +L  +V  V ++ RL + P  +     G   +  R+ +    ++       + +  L
Sbjct: 586  MRNVLGSRVTNVKVTLRLDTHPAMVTVLEMGAARHFLRMQQLAKTQEERAQ---LLQPTL 642

Query: 1569 EINPDHPIVETLRQKAEADKNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNRIYRMI 1742
            EINP H +++ L Q   ++      + LV  ++E A++++G  ++DP+    R+  ++
Sbjct: 643  EINPRHALIKKLNQLRASEPG--LAQLLVDQIYENAMIAAGL-VDDPRAMVGRLNELL 697



 Score = 94.7 bits (234), Expect = 3e-19
 Identities = 52/115 (45%), Positives = 75/115 (65%), Gaps = 4/115 (3%)
 Frame = +3

Query: 3   IAKSGTKAFMEALQAGADIS--MIGQFGVGFYSAYLVAEKVVVITKHNDDEQ--YAWESS 170
           IA+SG+KAF++ALQ  A+ S  +IGQFGVGFYSA++VA++V V ++        Y W S 
Sbjct: 175 IARSGSKAFLDALQNQAEASSKIIGQFGVGFYSAFMVADRVEVYSRSAAPGSLGYQWLSD 234

Query: 171 AGGSFTVRADHGEPIGRGTKVILHLKEDQTEYLEERRVKEVVKKHSQFIGYPITL 335
             G F +    G  +  GTK+I+HLK D  E+  E RV++VV K+S F+ +P+ L
Sbjct: 235 GSGVFEIAEASG--VRTGTKIIIHLKSDCKEFSSEARVRDVVTKYSNFVSFPLYL 287


  Database: RefSeq49_HP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,297,164
  Number of sequences in database:  32,964
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 74,119,679
Number of extensions: 1859022
Number of successful extensions: 5581
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 5564
Number of HSP's successfully gapped: 10
Length of query: 715
Length of database: 18,297,164
Length adjustment: 110
Effective length of query: 605
Effective length of database: 14,671,124
Effective search space: 8876030020
Effective search space used: 8876030020
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-001874
         (2145 letters)

Database: RefSeq49_MP.fasta 
           30,036 sequences; 15,617,559 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_032328.2| heat shock protein HSP 90-beta [Mus musculus].      1041   0.0  
Alignment   gi|NP_034610.1| heat shock protein HSP 90-alpha [Mus musculus].      939   0.0  
Alignment   gi|NP_035761.1| endoplasmin [Mus musculus].                          394   e-109
Alignment   gi|NP_080784.1| heat shock protein 75 kDa, mitochondrial precur...   182   1e-45

>ref|NP_032328.2| heat shock protein HSP 90-beta [Mus musculus].
          Length = 724

 Score = 1041 bits (2692), Expect = 0.0
 Identities = 540/620 (87%), Positives = 540/620 (87%)
 Frame = +3

Query: 3    IAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAEKVVVITKHNDDEQYAWESSAGGS 182
            IAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAEKVVVITKHNDDEQYAWESSAGGS
Sbjct: 105  IAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAEKVVVITKHNDDEQYAWESSAGGS 164

Query: 183  FTVRADHGEPIGRGTKVILHLKEDQTEYLEERRVKEVVKKHSQFIGYPITLYLEKXXXXX 362
            FTVRADHGEPIGRGTKVILHLKEDQTEYLEERRVKEVVKKHSQFIGYPITLYLEK     
Sbjct: 165  FTVRADHGEPIGRGTKVILHLKEDQTEYLEERRVKEVVKKHSQFIGYPITLYLEKEREKE 224

Query: 363  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYIDQEELNK 542
                                                               YIDQEELNK
Sbjct: 225  ISDDEAEEEKGEKEEEDKEDEEKPKIEDVGSDEEDDSGKDKKKKTKKIKEKYIDQEELNK 284

Query: 543  TKPIWTRNPDDITQEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFIPRRAPFDLF 722
            TKPIWTRNPDDITQEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFIPRRAPFDLF
Sbjct: 285  TKPIWTRNPDDITQEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFIPRRAPFDLF 344

Query: 723  ENKKKKNNIKLYVRRVFIMDSCDELIPEYLNFIRGVVDSEDLPLNISREMLQQSKILKVI 902
            ENKKKKNNIKLYVRRVFIMDSCDELIPEYLNFIRGVVDSEDLPLNISREMLQQSKILKVI
Sbjct: 345  ENKKKKNNIKLYVRRVFIMDSCDELIPEYLNFIRGVVDSEDLPLNISREMLQQSKILKVI 404

Query: 903  RKNIVKKCLELFSELAEDKENYKKFYEAFSKNLKLGIHEDSTNRRRLSELLRYHTSQSGD 1082
            RKNIVKKCLELFSELAEDKENYKKFYEAFSKNLKLGIHEDSTNRRRLSELLRYHTSQSGD
Sbjct: 405  RKNIVKKCLELFSELAEDKENYKKFYEAFSKNLKLGIHEDSTNRRRLSELLRYHTSQSGD 464

Query: 1083 EMTSLSEYVSRMKETQKSIYYITGESKEQVANSAFVERVRKRGFEVVYMTEPIDEYCVQQ 1262
            EMTSLSEYVSRMKETQKSIYYITGESKEQVANSAFVERVRKRGFEVVYMTEPIDEYCVQQ
Sbjct: 465  EMTSLSEYVSRMKETQKSIYYITGESKEQVANSAFVERVRKRGFEVVYMTEPIDEYCVQQ 524

Query: 1263 LKEFDGKSLVSVTXXXXXXXXXXXXXXXXXXXXXXXXNLCKLMKEILDKKVEKVTISNRL 1442
            LKEFDGKSLVSVT                        NLCKLMKEILDKKVEKVTISNRL
Sbjct: 525  LKEFDGKSLVSVTKEGLELPEDEEEKKKMEESKAKFENLCKLMKEILDKKVEKVTISNRL 584

Query: 1443 VSSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMMAKKHLEINPDHPIVETLRQKAEA 1622
            VSSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMMAKKHLEINPDHPIVETLRQKAEA
Sbjct: 585  VSSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMMAKKHLEINPDHPIVETLRQKAEA 644

Query: 1623 DKNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNRIYRMIKLGLGIDEDEVTAEEPSAAV 1802
            DKNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNRIYRMIKLGLGIDEDEVTAEEPSAAV
Sbjct: 645  DKNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNRIYRMIKLGLGIDEDEVTAEEPSAAV 704

Query: 1803 PDEIPPLEGDEDASRMEEVD 1862
            PDEIPPLEGDEDASRMEEVD
Sbjct: 705  PDEIPPLEGDEDASRMEEVD 724


>ref|NP_034610.1| heat shock protein HSP 90-alpha [Mus musculus].
          Length = 733

 Score =  939 bits (2428), Expect = 0.0
 Identities = 475/624 (76%), Positives = 517/624 (82%), Gaps = 4/624 (0%)
 Frame = +3

Query: 3    IAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAEKVVVITKHNDDEQYAWESSAGGS 182
            IAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAEKV VITKHNDDEQYAWESSAGGS
Sbjct: 110  IAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAEKVTVITKHNDDEQYAWESSAGGS 169

Query: 183  FTVRADHGEPIGRGTKVILHLKEDQTEYLEERRVKEVVKKHSQFIGYPITLYL----EKX 350
            FTVR D GEP+GRGTKVILHLKEDQTEYLEERR+KE+VKKHSQFIGYPITL++    +K 
Sbjct: 170  FTVRTDTGEPMGRGTKVILHLKEDQTEYLEERRIKEIVKKHSQFIGYPITLFVEKERDKE 229

Query: 351  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYIDQE 530
                                                                   YIDQE
Sbjct: 230  VSDDEAEEKEEKEEEKEKEEKESDDKPEIEDVGSDEEEEEKKDGDKKKKKKIKEKYIDQE 289

Query: 531  ELNKTKPIWTRNPDDITQEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFIPRRAP 710
            ELNKTKPIWTRNPDDIT EEYGEFYKSLTNDWE+HLAVKHFSVEGQLEFRALLF+PRRAP
Sbjct: 290  ELNKTKPIWTRNPDDITNEEYGEFYKSLTNDWEEHLAVKHFSVEGQLEFRALLFVPRRAP 349

Query: 711  FDLFENKKKKNNIKLYVRRVFIMDSCDELIPEYLNFIRGVVDSEDLPLNISREMLQQSKI 890
            FDLFEN+KKKNNIKLYVRRVFIMD+C+ELIPEYLNFIRGVVDSEDLPLNISREMLQQSKI
Sbjct: 350  FDLFENRKKKNNIKLYVRRVFIMDNCEELIPEYLNFIRGVVDSEDLPLNISREMLQQSKI 409

Query: 891  LKVIRKNIVKKCLELFSELAEDKENYKKFYEAFSKNLKLGIHEDSTNRRRLSELLRYHTS 1070
            LKVIRKN+VKKCLELF+ELAEDKENYKKFYE FSKN+KLGIHEDS NR++LSELLRY+TS
Sbjct: 410  LKVIRKNLVKKCLELFTELAEDKENYKKFYEQFSKNIKLGIHEDSQNRKKLSELLRYYTS 469

Query: 1071 QSGDEMTSLSEYVSRMKETQKSIYYITGESKEQVANSAFVERVRKRGFEVVYMTEPIDEY 1250
             SGDEM SL +Y +RMKE QK IY+ITGE+K+QVANSAFVER+RK G EV+YM EPIDEY
Sbjct: 470  ASGDEMVSLKDYCTRMKENQKHIYFITGETKDQVANSAFVERLRKHGLEVIYMIEPIDEY 529

Query: 1251 CVQQLKEFDGKSLVSVTXXXXXXXXXXXXXXXXXXXXXXXXNLCKLMKEILDKKVEKVTI 1430
            CVQQLKEF+GK+LVSVT                        NLCK+MK+IL+KKVEKV +
Sbjct: 530  CVQQLKEFEGKTLVSVTKEGLELPEDEEEKKKQEEKKTKFENLCKIMKDILEKKVEKVVV 589

Query: 1431 SNRLVSSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMMAKKHLEINPDHPIVETLRQ 1610
            SNRLV+SPCCIVTSTYGWTANMERIMKAQALRDNSTMGYM AKKHLEINPDH I+ETLRQ
Sbjct: 590  SNRLVTSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMAAKKHLEINPDHSIIETLRQ 649

Query: 1611 KAEADKNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNRIYRMIKLGLGIDEDEVTAEEP 1790
            KAEADKNDK+VKDLV+LL+ETALLSSGFSLEDPQTH+NRIYRMIKLGLGIDED+ T ++ 
Sbjct: 650  KAEADKNDKSVKDLVILLYETALLSSGFSLEDPQTHANRIYRMIKLGLGIDEDDPTVDDT 709

Query: 1791 SAAVPDEIPPLEGDEDASRMEEVD 1862
            SAAV +E+PPLEGD+D SRMEEVD
Sbjct: 710  SAAVTEEMPPLEGDDDTSRMEEVD 733


>ref|NP_035761.1| endoplasmin [Mus musculus].
          Length = 802

 Score =  394 bits (1013), Expect = e-109
 Identities = 204/453 (45%), Positives = 289/453 (63%), Gaps = 6/453 (1%)
 Frame = +3

Query: 522  DQEELNKTKPIWTRNPDDITQEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFIPR 701
            D E +N  KPIW R   ++ ++EY  FYKS + + +D +A  HF+ EG++ F+++LF+P 
Sbjct: 332  DWELMNDIKPIWQRPSKEVEEDEYKAFYKSFSKESDDPMAYIHFTAEGEVTFKSILFVPT 391

Query: 702  RAPFDLFEN--KKKKNNIKLYVRRVFIMDSCDELIPEYLNFIRGVVDSEDLPLNISREML 875
             AP  LF+    KK + IKLYVRRVFI D   +++P+YLNF++GVVDS+DLPLN+SRE L
Sbjct: 392  SAPRGLFDEYGSKKSDYIKLYVRRVFITDDFHDMMPKYLNFVKGVVDSDDLPLNVSRETL 451

Query: 876  QQSKILKVIRKNIVKKCLELFSELAEDKENYKKFYEAFSKNLKLGIHEDSTNRRRLSELL 1055
            QQ K+LKVIRK +V+K L++  ++A++K N   F++ F  N+KLG+ ED +NR RL++LL
Sbjct: 452  QQHKLLKVIRKKLVRKTLDMIKKIADEKYN-DTFWKEFGTNIKLGVIEDHSNRTRLAKLL 510

Query: 1056 RYHTSQSGDEMTSLSEYVSRMKETQKSIYYITGESKEQVANSAFVERVRKRGFEVVYMTE 1235
            R+ +S    ++TSL +YV RMKE Q  IY++ G S+++  +S FVER+ K+G+EV+Y+TE
Sbjct: 511  RFQSSHHSTDITSLDQYVERMKEKQDKIYFMAGSSRKEAESSPFVERLLKKGYEVIYLTE 570

Query: 1236 PIDEYCVQQLKEFDGKSLVSVTXXXXXXXXXXXXXXXXXXXXXXXXNLCKLMKE-ILDKK 1412
            P+DEYC+Q L EFDGK   +V                          L   MK+  L  K
Sbjct: 571  PVDEYCIQALPEFDGKRFQNVAKEGVKFDESEKTKESREATEKEFEPLLNWMKDKALKDK 630

Query: 1413 VEKVTISNRLVSSPCCIVTSTYGWTANMERIMKAQAL---RDNSTMGYMMAKKHLEINPD 1583
            +EK  +S RL  SPC +V S YGW+ NMERIMKAQA    +D ST  Y   KK  EINP 
Sbjct: 631  IEKAVVSQRLTESPCALVASQYGWSGNMERIMKAQAYQTGKDISTNYYASQKKTFEINPR 690

Query: 1584 HPIVETLRQKAEADKNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNRIYRMIKLGLGID 1763
            HP++  + ++ + D++DK V DL V+LFETA L SG+ L D + + +RI RM++L L ID
Sbjct: 691  HPLIRDMLRRIKEDEDDKTVMDLAVVLFETATLRSGYLLPDTKAYGDRIERMLRLSLNID 750

Query: 1764 EDEVTAEEPSAAVPDEIPPLEGDEDASRMEEVD 1862
             +    EEP     D     E D +    EE+D
Sbjct: 751  PEAQVEEEPEEEPEDTSEDAE-DSEQDEGEEMD 782



 Score =  112 bits (280), Expect = 1e-24
 Identities = 62/121 (51%), Positives = 85/121 (70%), Gaps = 6/121 (4%)
 Frame = +3

Query: 3   IAKSGTKAFM----EALQAGADIS-MIGQFGVGFYSAYLVAEKVVVITKHNDDEQYAWES 167
           IAKSGT  F+    EA + G   S +IGQFGVGFYSA+LVA+KV+V +KHN+D Q+ WES
Sbjct: 166 IAKSGTSEFLNKMTEAQEDGQSTSELIGQFGVGFYSAFLVADKVIVTSKHNNDTQHIWES 225

Query: 168 SAGGSFTVRAD-HGEPIGRGTKVILHLKEDQTEYLEERRVKEVVKKHSQFIGYPITLYLE 344
            +   F+V AD  G  +GRGT + L LKE+ ++YLE   +K +V+K+SQFI +PI ++  
Sbjct: 226 DS-NEFSVIADPRGNTLGRGTTITLVLKEEASDYLELDTIKNLVRKYSQFINFPIYVWSS 284

Query: 345 K 347
           K
Sbjct: 285 K 285


>ref|NP_080784.1| heat shock protein 75 kDa, mitochondrial precursor [Mus musculus].
          Length = 706

 Score =  182 bits (461), Expect = 1e-45
 Identities = 108/414 (26%), Positives = 217/414 (52%), Gaps = 9/414 (2%)
 Frame = +3

Query: 516  YIDQEELNKTKPIWTRNPDDITQEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFI 695
            Y++ + +N  + IW  +P DI++ ++ EFY+ +   ++      H+  +  L  R++ ++
Sbjct: 288  YLNGKRINTLQAIWMMDPKDISEFQHEEFYRYIAQAYDKPRFTLHYKTDAPLNIRSIFYV 347

Query: 696  PRRAPFDLFENKKKKNNIKLYVRRVFIMDSCDELIPEYLNFIRGVVDSEDLPLNISREML 875
            P   P     +++  +++ LY R+V I     +++P++L FIRGVVDSED+PLN+SRE+L
Sbjct: 348  PEMKPSMFDVSRELGSSVALYSRKVLIQTKAADILPKWLRFIRGVVDSEDIPLNLSRELL 407

Query: 876  QQSKILKVIRKNIVKKCLELFSELAE-DKENYKKFYEAFSKNLKLGIHEDSTN--RRRLS 1046
            Q+S +++ +R  + ++ ++ F + ++ D E Y KF+E +   ++ GI   +    +  ++
Sbjct: 408  QESALIRKLRDVLQQRLIKFFIDQSKKDAEKYAKFFEDYGLFMREGIVTTAEQDIKEDIA 467

Query: 1047 ELLRYHTSQ-SGDEMTSLSEYVSRMKETQKSIYYITGESKEQVANSAFVERVRKRGFEVV 1223
            +LLRY +S     ++TSL +Y SRM+   ++IYY+   ++    +S + E ++++  EV+
Sbjct: 468  KLLRYESSALPAGQLTSLPDYASRMQAGTRNIYYLCAPNRHLAEHSPYYEAMKQKHTEVL 527

Query: 1224 YMTEPIDEYCVQQLKEFDGKSLVSV-----TXXXXXXXXXXXXXXXXXXXXXXXXNLCKL 1388
            +  E  DE  +  L+EFD K L+SV                              +L   
Sbjct: 528  FCYEQFDELTLLHLREFDKKKLISVETDIVVDHYKEEKFEDTSPADERLSEKETEDLMAW 587

Query: 1389 MKEILDKKVEKVTISNRLVSSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMMAKKHL 1568
            M+  L  +V  V ++ RL + P  +     G   +  R+ +    ++       + +  L
Sbjct: 588  MRNALGSRVTNVKVTFRLDTHPAMVTVLEMGAARHFLRMQQLAKTQEERAQ---LLQPTL 644

Query: 1569 EINPDHPIVETLRQKAEADKNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNRI 1730
            EINP H +++ L Q  E++   +  + LV  ++E A++++G  ++DP+    R+
Sbjct: 645  EINPRHTLIKKLCQLRESE--PELAQLLVDQIYENAMIAAGL-VDDPRAMVGRL 695



 Score = 98.2 bits (243), Expect = 2e-20
 Identities = 54/115 (46%), Positives = 76/115 (66%), Gaps = 4/115 (3%)
 Frame = +3

Query: 3   IAKSGTKAFMEALQAGADIS--MIGQFGVGFYSAYLVAEKVVVITKHNDDEQ--YAWESS 170
           IA+SG+KAF+EALQ  A+ S  +IGQFGVGFYSA++VA+KV V ++    E   Y W S 
Sbjct: 177 IARSGSKAFLEALQNQAETSSKIIGQFGVGFYSAFMVADKVEVYSRSAAPESPGYQWLSD 236

Query: 171 AGGSFTVRADHGEPIGRGTKVILHLKEDQTEYLEERRVKEVVKKHSQFIGYPITL 335
             G F +    G  +  GTK+I+HLK D  ++  E RV++VV K+S F+ +P+ L
Sbjct: 237 GSGVFEIAEASG--VRPGTKIIIHLKSDCKDFASESRVQDVVTKYSNFVSFPLYL 289


  Database: RefSeq49_MP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 15,617,559
  Number of sequences in database:  30,036
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 63,124,216
Number of extensions: 1569952
Number of successful extensions: 4658
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 4639
Number of HSP's successfully gapped: 8
Length of query: 715
Length of database: 15,617,559
Length adjustment: 109
Effective length of query: 606
Effective length of database: 12,343,635
Effective search space: 7480242810
Effective search space used: 7480242810
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-001874
         (2145 letters)

Database: RefSeq49_SP.fasta 
           24,897 sequences; 11,343,932 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_001929605.1| PREDICTED: heat shock protein HSP 90-beta is...  1041   0.0  
Alignment   gi|NP_999138.1| heat shock protein HSP 90-alpha [Sus scrofa].        944   0.0  
Alignment   gi|NP_999268.1| endoplasmin precursor [Sus scrofa].                  395   e-110
Alignment   gi|XP_003355702.1| PREDICTED: endoplasmin-like [Sus scrofa].         395   e-110
Alignment   gi|NP_001230874.1| TNF receptor-associated protein 1 [Sus scrof...   182   8e-46
Alignment   gi|XP_003123773.1| PREDICTED: hypothetical protein LOC100522124...   132   6e-31

>ref|XP_001929605.1| PREDICTED: heat shock protein HSP 90-beta isoform 1 [Sus scrofa].
          Length = 724

 Score = 1041 bits (2692), Expect = 0.0
 Identities = 540/620 (87%), Positives = 540/620 (87%)
 Frame = +3

Query: 3    IAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAEKVVVITKHNDDEQYAWESSAGGS 182
            IAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAEKVVVITKHNDDEQYAWESSAGGS
Sbjct: 105  IAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAEKVVVITKHNDDEQYAWESSAGGS 164

Query: 183  FTVRADHGEPIGRGTKVILHLKEDQTEYLEERRVKEVVKKHSQFIGYPITLYLEKXXXXX 362
            FTVRADHGEPIGRGTKVILHLKEDQTEYLEERRVKEVVKKHSQFIGYPITLYLEK     
Sbjct: 165  FTVRADHGEPIGRGTKVILHLKEDQTEYLEERRVKEVVKKHSQFIGYPITLYLEKEREKE 224

Query: 363  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYIDQEELNK 542
                                                               YIDQEELNK
Sbjct: 225  ISDDEAEEEKGDKEEEDKDDEEKPKIEDVGSDEEDDSGKDKKKKTKKIKEKYIDQEELNK 284

Query: 543  TKPIWTRNPDDITQEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFIPRRAPFDLF 722
            TKPIWTRNPDDITQEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFIPRRAPFDLF
Sbjct: 285  TKPIWTRNPDDITQEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFIPRRAPFDLF 344

Query: 723  ENKKKKNNIKLYVRRVFIMDSCDELIPEYLNFIRGVVDSEDLPLNISREMLQQSKILKVI 902
            ENKKKKNNIKLYVRRVFIMDSCDELIPEYLNFIRGVVDSEDLPLNISREMLQQSKILKVI
Sbjct: 345  ENKKKKNNIKLYVRRVFIMDSCDELIPEYLNFIRGVVDSEDLPLNISREMLQQSKILKVI 404

Query: 903  RKNIVKKCLELFSELAEDKENYKKFYEAFSKNLKLGIHEDSTNRRRLSELLRYHTSQSGD 1082
            RKNIVKKCLELFSELAEDKENYKKFYEAFSKNLKLGIHEDSTNRRRLSELLRYHTSQSGD
Sbjct: 405  RKNIVKKCLELFSELAEDKENYKKFYEAFSKNLKLGIHEDSTNRRRLSELLRYHTSQSGD 464

Query: 1083 EMTSLSEYVSRMKETQKSIYYITGESKEQVANSAFVERVRKRGFEVVYMTEPIDEYCVQQ 1262
            EMTSLSEYVSRMKETQKSIYYITGESKEQVANSAFVERVRKRGFEVVYMTEPIDEYCVQQ
Sbjct: 465  EMTSLSEYVSRMKETQKSIYYITGESKEQVANSAFVERVRKRGFEVVYMTEPIDEYCVQQ 524

Query: 1263 LKEFDGKSLVSVTXXXXXXXXXXXXXXXXXXXXXXXXNLCKLMKEILDKKVEKVTISNRL 1442
            LKEFDGKSLVSVT                        NLCKLMKEILDKKVEKVTISNRL
Sbjct: 525  LKEFDGKSLVSVTKEGLELPEDEEEKKKMEESKAKFENLCKLMKEILDKKVEKVTISNRL 584

Query: 1443 VSSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMMAKKHLEINPDHPIVETLRQKAEA 1622
            VSSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMMAKKHLEINPDHPIVETLRQKAEA
Sbjct: 585  VSSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMMAKKHLEINPDHPIVETLRQKAEA 644

Query: 1623 DKNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNRIYRMIKLGLGIDEDEVTAEEPSAAV 1802
            DKNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNRIYRMIKLGLGIDEDEVTAEEPSAAV
Sbjct: 645  DKNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNRIYRMIKLGLGIDEDEVTAEEPSAAV 704

Query: 1803 PDEIPPLEGDEDASRMEEVD 1862
            PDEIPPLEGDEDASRMEEVD
Sbjct: 705  PDEIPPLEGDEDASRMEEVD 724


>ref|NP_999138.1| heat shock protein HSP 90-alpha [Sus scrofa].
          Length = 733

 Score =  944 bits (2440), Expect = 0.0
 Identities = 478/624 (76%), Positives = 518/624 (83%), Gaps = 4/624 (0%)
 Frame = +3

Query: 3    IAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAEKVVVITKHNDDEQYAWESSAGGS 182
            IAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAEKV VITKHNDDEQYAWESSAGGS
Sbjct: 110  IAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAEKVTVITKHNDDEQYAWESSAGGS 169

Query: 183  FTVRADHGEPIGRGTKVILHLKEDQTEYLEERRVKEVVKKHSQFIGYPITLYL----EKX 350
            FTVR D GEP+GRGTKVILHLKEDQTEYLEERR+KE+VKKHSQFIGYPITL++    +K 
Sbjct: 170  FTVRTDTGEPMGRGTKVILHLKEDQTEYLEERRIKEIVKKHSQFIGYPITLFVEKERDKE 229

Query: 351  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYIDQE 530
                                                                   YIDQE
Sbjct: 230  VSDDEAEEKEDKEEEKEKEEKESEDKPEIEDVGSDEEEEEKKDGDKKKKKKIKEKYIDQE 289

Query: 531  ELNKTKPIWTRNPDDITQEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFIPRRAP 710
            ELNKTKPIWTRNPDDIT EEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLF+PRRAP
Sbjct: 290  ELNKTKPIWTRNPDDITNEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFVPRRAP 349

Query: 711  FDLFENKKKKNNIKLYVRRVFIMDSCDELIPEYLNFIRGVVDSEDLPLNISREMLQQSKI 890
            FDLFEN+KKKNNIKLYVRRVFIMD+C+ELIPEYLNFIRGVVDSEDLPLNISREMLQQSKI
Sbjct: 350  FDLFENRKKKNNIKLYVRRVFIMDNCEELIPEYLNFIRGVVDSEDLPLNISREMLQQSKI 409

Query: 891  LKVIRKNIVKKCLELFSELAEDKENYKKFYEAFSKNLKLGIHEDSTNRRRLSELLRYHTS 1070
            LKVIRKN+VKKCLELF+ELAEDKENYKKFYE FSKN+KLGIHEDS NR++LSELLRY+TS
Sbjct: 410  LKVIRKNLVKKCLELFTELAEDKENYKKFYEQFSKNIKLGIHEDSQNRKKLSELLRYYTS 469

Query: 1071 QSGDEMTSLSEYVSRMKETQKSIYYITGESKEQVANSAFVERVRKRGFEVVYMTEPIDEY 1250
             SGDEM SL +Y +RMKE QK IYYITGE+K+QVANSAFVER+RK G EV+YM EPIDEY
Sbjct: 470  ASGDEMVSLKDYCTRMKENQKHIYYITGETKDQVANSAFVERLRKHGLEVIYMIEPIDEY 529

Query: 1251 CVQQLKEFDGKSLVSVTXXXXXXXXXXXXXXXXXXXXXXXXNLCKLMKEILDKKVEKVTI 1430
            CVQQLKEF+GK+LVSVT                        NLCK+MK+IL+KKVEKV +
Sbjct: 530  CVQQLKEFEGKTLVSVTKEGLELPEDEEEKKKQEEKKTKFENLCKIMKDILEKKVEKVVV 589

Query: 1431 SNRLVSSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMMAKKHLEINPDHPIVETLRQ 1610
            SNRLV+SPCCIVTSTYGWTANMERIMKAQALRDNSTMGYM AKKHLEINPDH I+ETLRQ
Sbjct: 590  SNRLVTSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMAAKKHLEINPDHSIIETLRQ 649

Query: 1611 KAEADKNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNRIYRMIKLGLGIDEDEVTAEEP 1790
            KAEADKNDK+VKDLV+LL+ETALLSSGFSLEDPQTH+NRIYRMIKLGLGIDED+ TA++ 
Sbjct: 650  KAEADKNDKSVKDLVILLYETALLSSGFSLEDPQTHANRIYRMIKLGLGIDEDDPTADDS 709

Query: 1791 SAAVPDEIPPLEGDEDASRMEEVD 1862
            SAAV +E+PPLEGD+D SRMEEVD
Sbjct: 710  SAAVTEEMPPLEGDDDTSRMEEVD 733


>ref|NP_999268.1| endoplasmin precursor [Sus scrofa].
          Length = 804

 Score =  395 bits (1015), Expect = e-110
 Identities = 207/457 (45%), Positives = 290/457 (63%), Gaps = 10/457 (2%)
 Frame = +3

Query: 522  DQEELNKTKPIWTRNPDDITQEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFIPR 701
            D E +N  KPIW R   ++  +EY  FYKS + + +D +A  HF+ EG++ F+++LF+P 
Sbjct: 332  DWELMNDIKPIWQRPSKEVEDDEYKAFYKSFSKESDDPMAYIHFTAEGEVTFKSILFVPT 391

Query: 702  RAPFDLFEN--KKKKNNIKLYVRRVFIMDSCDELIPEYLNFIRGVVDSEDLPLNISREML 875
             AP  LF+    KK + IKLYVRRVFI D   +++P+YLNF++GVVDS+DLPLN+SRE L
Sbjct: 392  SAPRGLFDEYGSKKSDYIKLYVRRVFITDDFHDMMPKYLNFVKGVVDSDDLPLNVSRETL 451

Query: 876  QQSKILKVIRKNIVKKCLELFSELAEDKENYKKFYEAFSKNLKLGIHEDSTNRRRLSELL 1055
            QQ K+LKVIRK +V+K L++  ++A++K N   F++ F  N+KLG+ ED +NR RL++LL
Sbjct: 452  QQHKLLKVIRKKLVRKTLDMIKKIADEKYN-DTFWKEFGTNIKLGVIEDHSNRTRLAKLL 510

Query: 1056 RYHTSQSGDEMTSLSEYVSRMKETQKSIYYITGESKEQVANSAFVERVRKRGFEVVYMTE 1235
            R+ +S    ++TSL +YV RMKE Q  IY++ G S+++  +S FVER+ K+G+EV+Y+TE
Sbjct: 511  RFQSSHHPSDITSLDQYVERMKEKQDKIYFMAGSSRKEAESSPFVERLLKKGYEVIYLTE 570

Query: 1236 PIDEYCVQQLKEFDGKSLVSVTXXXXXXXXXXXXXXXXXXXXXXXXNLCKLMKE-ILDKK 1412
            P+DEYC+Q L EFDGK   +V                          L   MK+  L  K
Sbjct: 571  PVDEYCIQALPEFDGKRFQNVAKEGVKFDESEKSKENREAVEKEFEPLLNWMKDKALKDK 630

Query: 1413 VEKVTISNRLVSSPCCIVTSTYGWTANMERIMKAQAL---RDNSTMGYMMAKKHLEINPD 1583
            +EK  +S RL  SPC +V S YGW+ NMERIMKAQA    +D ST  Y   KK  EINP 
Sbjct: 631  IEKAVVSQRLTESPCALVASQYGWSGNMERIMKAQAYQTGKDISTNYYASQKKTFEINPR 690

Query: 1584 HPIVETLRQKAEADKNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNRIYRMIKLGLGID 1763
            HP++  + ++ + D++DK V DL V+LFETA L SG+ L D + + +RI RM++L L ID
Sbjct: 691  HPLIRDMLRRVKEDEDDKTVSDLAVVLFETATLRSGYLLPDTKAYGDRIERMLRLSLNID 750

Query: 1764 ED----EVTAEEPSAAVPDEIPPLEGDEDASRMEEVD 1862
             D    E   EEP     D     E D+D    EE+D
Sbjct: 751  PDAKVEEEPEEEPEETTEDTTEDTEQDDD----EEMD 783



 Score =  113 bits (283), Expect = 4e-25
 Identities = 63/121 (52%), Positives = 85/121 (70%), Gaps = 6/121 (4%)
 Frame = +3

Query: 3   IAKSGTKAFM----EALQAGADIS-MIGQFGVGFYSAYLVAEKVVVITKHNDDEQYAWES 167
           IAKSGT  F+    EA + G   S +IGQFGVGFYSA+LVA+KV+V +KHN+D Q+ WES
Sbjct: 166 IAKSGTSEFLNKMTEAQEDGQSTSELIGQFGVGFYSAFLVADKVIVTSKHNNDTQHIWES 225

Query: 168 SAGGSFTVRAD-HGEPIGRGTKVILHLKEDQTEYLEERRVKEVVKKHSQFIGYPITLYLE 344
            +   F+V AD  G  +GRGT + L LKE+ ++YLE   +K +VKK+SQFI +PI ++  
Sbjct: 226 DS-NEFSVIADPRGNTLGRGTTITLVLKEEASDYLELDTIKNLVKKYSQFINFPIYVWSS 284

Query: 345 K 347
           K
Sbjct: 285 K 285


>ref|XP_003355702.1| PREDICTED: endoplasmin-like [Sus scrofa].
          Length = 492

 Score =  395 bits (1015), Expect = e-110
 Identities = 207/457 (45%), Positives = 290/457 (63%), Gaps = 10/457 (2%)
 Frame = +3

Query: 522  DQEELNKTKPIWTRNPDDITQEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFIPR 701
            D E +N  KPIW R   ++  +EY  FYKS + + +D +A  HF+ EG++ F+++LF+P 
Sbjct: 20   DWELMNDIKPIWQRPSKEVEDDEYKAFYKSFSKESDDPMAYIHFTAEGEVTFKSILFVPT 79

Query: 702  RAPFDLFEN--KKKKNNIKLYVRRVFIMDSCDELIPEYLNFIRGVVDSEDLPLNISREML 875
             AP  LF+    KK + IKLYVRRVFI D   +++P+YLNF++GVVDS+DLPLN+SRE L
Sbjct: 80   SAPRGLFDEYGSKKSDYIKLYVRRVFITDDFHDMMPKYLNFVKGVVDSDDLPLNVSRETL 139

Query: 876  QQSKILKVIRKNIVKKCLELFSELAEDKENYKKFYEAFSKNLKLGIHEDSTNRRRLSELL 1055
            QQ K+LKVIRK +V+K L++  ++A++K N   F++ F  N+KLG+ ED +NR RL++LL
Sbjct: 140  QQHKLLKVIRKKLVRKTLDMIKKIADEKYN-DTFWKEFGTNIKLGVIEDHSNRTRLAKLL 198

Query: 1056 RYHTSQSGDEMTSLSEYVSRMKETQKSIYYITGESKEQVANSAFVERVRKRGFEVVYMTE 1235
            R+ +S    ++TSL +YV RMKE Q  IY++ G S+++  +S FVER+ K+G+EV+Y+TE
Sbjct: 199  RFQSSHHPSDITSLDQYVERMKEKQDKIYFMAGSSRKEAESSPFVERLLKKGYEVIYLTE 258

Query: 1236 PIDEYCVQQLKEFDGKSLVSVTXXXXXXXXXXXXXXXXXXXXXXXXNLCKLMKE-ILDKK 1412
            P+DEYC+Q L EFDGK   +V                          L   MK+  L  K
Sbjct: 259  PVDEYCIQALPEFDGKRFQNVAKEGVKFDESEKSKENREAVEKEFEPLLNWMKDKALKDK 318

Query: 1413 VEKVTISNRLVSSPCCIVTSTYGWTANMERIMKAQAL---RDNSTMGYMMAKKHLEINPD 1583
            +EK  +S RL  SPC +V S YGW+ NMERIMKAQA    +D ST  Y   KK  EINP 
Sbjct: 319  IEKAVVSQRLTESPCALVASQYGWSGNMERIMKAQAYQTGKDISTNYYASQKKTFEINPR 378

Query: 1584 HPIVETLRQKAEADKNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNRIYRMIKLGLGID 1763
            HP++  + ++ + D++DK V DL V+LFETA L SG+ L D + + +RI RM++L L ID
Sbjct: 379  HPLIRDMLRRVKEDEDDKTVSDLAVVLFETATLRSGYLLPDTKAYGDRIERMLRLSLNID 438

Query: 1764 ED----EVTAEEPSAAVPDEIPPLEGDEDASRMEEVD 1862
             D    E   EEP     D     E D+D    EE+D
Sbjct: 439  PDAKVEEEPEEEPEETTEDTTEDTEQDDD----EEMD 471


>ref|NP_001230874.1| TNF receptor-associated protein 1 [Sus scrofa].
          Length = 702

 Score =  182 bits (461), Expect = 8e-46
 Identities = 109/418 (26%), Positives = 216/418 (51%), Gaps = 9/418 (2%)
 Frame = +3

Query: 516  YIDQEELNKTKPIWTRNPDDITQEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFI 695
            Y++   LN  + +W  +P D+++E++ EFY+ +    +      H+  +  L  R+  ++
Sbjct: 284  YLNGRRLNTLQAVWMMDPKDVSEEQHEEFYRYVAQAPDKPRYTLHYKTDAPLNIRSTFYV 343

Query: 696  PRRAPFDLFENKKKKNNIKLYVRRVFIMDSCDELIPEYLNFIRGVVDSEDLPLNISREML 875
            P   P     +++   ++ LY R+V I      ++P +L F+RGVVDSED+PLN+SRE+L
Sbjct: 344  PEMKPSVFDVSRELGPSVSLYSRKVLIQTKATNILPTWLRFVRGVVDSEDIPLNLSRELL 403

Query: 876  QQSKILKVIRKNIVKKCLELFSELAE-DKENYKKFYEAFSKNLKLGIHEDSTN--RRRLS 1046
            Q+S +++ ++  + ++ ++ FS+ ++ D E Y +F+E +   ++ GI   +    +  ++
Sbjct: 404  QESALIRKLQGVLQQRLIKFFSDQSKKDVEKYARFFEDYGLFMREGIVTTTEQEVKEDIA 463

Query: 1047 ELLRYHTSQ-SGDEMTSLSEYVSRMKETQKSIYYITGESKEQVANSAFVERVRKRGFEVV 1223
            +LLRY +S     ++TSL +Y SRM+   +SIYY+   ++    +S + E ++++  EV+
Sbjct: 464  KLLRYESSALPAGQLTSLPDYASRMQAGTRSIYYLCAPNRHLAEHSPYYEAMKQKNTEVL 523

Query: 1224 YMTEPIDEYCVQQLKEFDGKSLVSVTXXXXXXXXXXXXXXXXXXXXXXXX-----NLCKL 1388
            +  E  DE  +  L+EFD K L+SV                              +L   
Sbjct: 524  FCYEQFDELTLLHLREFDRKKLISVETDIVIDHYKEEKFEDSSPAGDRLSEEEMEDLMAW 583

Query: 1389 MKEILDKKVEKVTISNRLVSSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMMAKKHL 1568
            M+  L  +V  V ++ RL + P  I     G   +  R+ +    ++       + +  L
Sbjct: 584  MRNALGSRVTNVKVTLRLDTHPAMITVLEMGAARHFLRMQQLAKTQEERAQ---LLQPTL 640

Query: 1569 EINPDHPIVETLRQKAEADKNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNRIYRMI 1742
            EINP H +++ L Q   ++ +    + LV  ++E A++++G S +DP+   +R+ R++
Sbjct: 641  EINPRHTLIKKLSQLRHSEPD--LAQLLVDQIYENAMITAGLS-DDPRPMVSRLNRLL 695



 Score = 97.8 bits (242), Expect = 2e-20
 Identities = 53/115 (46%), Positives = 76/115 (66%), Gaps = 4/115 (3%)
 Frame = +3

Query: 3   IAKSGTKAFMEALQAGADIS--MIGQFGVGFYSAYLVAEKVVVITKHND--DEQYAWESS 170
           IA+SG+KAF++ALQ  A+ S  +IGQFGVGFYSA++VA+KV V ++  D     + W S 
Sbjct: 173 IARSGSKAFLDALQNQAEASGKIIGQFGVGFYSAFMVADKVEVYSRSVDAGSPGFQWLSD 232

Query: 171 AGGSFTVRADHGEPIGRGTKVILHLKEDQTEYLEERRVKEVVKKHSQFIGYPITL 335
             G F +    G  +  GTK+I+HLK D  E+  E RV++VV K+S F+ +P+ L
Sbjct: 233 GSGVFEIAEAAG--VRTGTKIIIHLKADSREFAHEARVRDVVTKYSNFVSFPLYL 285


>ref|XP_003123773.1| PREDICTED: hypothetical protein LOC100522124 [Sus scrofa].
          Length = 241

 Score =  132 bits (333), Expect = 6e-31
 Identities = 73/118 (61%), Positives = 84/118 (71%), Gaps = 1/118 (0%)
 Frame = +3

Query: 813  NFIRGVVDSEDLPLNISREMLQQSKILKVIRKNIVKKCLELFSELAEDKENYKKFYEAFS 992
            NFI GV+ SED P N+S+EMLQQS +LK+ RKN V KCL LFSELAEDK N K  Y AFS
Sbjct: 122  NFIHGVLASEDFPRNLSQEMLQQSPVLKLFRKNTVTKCLALFSELAEDKVNAKNIYAAFS 181

Query: 993  KNLKLGIHEDSTNRRRLSELLRYHTSQSGDEMTSLSEYVS-RMKETQKSIYYITGESK 1163
            K  KLG+H+D+ +R+   ELL YH   SGDEMT LS  V    +ETQ SI Y TGESK
Sbjct: 182  KTRKLGLHKDAPHRQCPPELLHYHIISSGDEMTPLSLRVCLSHEETQASIDYRTGESK 239


  Database: RefSeq49_SP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 11,343,932
  Number of sequences in database:  24,897
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 46,423,304
Number of extensions: 1165360
Number of successful extensions: 3680
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 3657
Number of HSP's successfully gapped: 10
Length of query: 715
Length of database: 11,343,932
Length adjustment: 106
Effective length of query: 609
Effective length of database: 8,704,850
Effective search space: 5301253650
Effective search space used: 5301253650
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

BLASTN 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-001874
         (2145 letters)

Database: Sscrofa_10.2.fasta 
           4582 sequences; 2,808,509,378 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Sscrofa_Chr07                                                         745   0.0  
Sscrofa_Chr02                                                         555   e-155
Sscrofa_Chr05                                                         167   3e-38
gb|GL894619.1| Sus scrofa unplaced genomic scaffold chrU_scaffol...    62   1e-06
Sscrofa_Chr01                                                          62   1e-06

>Sscrofa_Chr07 
||          Length = 134764511

 Score =  745 bits (376), Expect = 0.0
 Identities = 376/376 (100%)
 Strand = Plus / Plus

                                                                            
Query: 1755     ggcattgatgaggacgaagtgacagcagaggagcccagtgctgctgttcctgatgagatc 1814
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45119558 ggcattgatgaggacgaagtgacagcagaggagcccagtgctgctgttcctgatgagatc 45119617

                                                                            
Query: 1815     cccccgctcgagggtgatgaggatgcatctcgcatggaagaagtagattaggagttgcta 1874
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45119618 cccccgctcgagggtgatgaggatgcatctcgcatggaagaagtagattaggagttgcta 45119677

                                                                            
Query: 1875     cctgcaaactttgttccctctgtatagtgtccccattggctcccctggcagcagccccca 1934
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45119678 cctgcaaactttgttccctctgtatagtgtccccattggctcccctggcagcagccccca 45119737

                                                                            
Query: 1935     gtggccctagcccacctggtctcctctgctgatgtctagtggttttatttgtttttctgt 1994
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45119738 gtggccctagcccacctggtctcctctgctgatgtctagtggttttatttgtttttctgt 45119797

                                                                            
Query: 1995     ctaaggcaggctacaggggccgcaagccctaataacccttcccacatttgacactgggtt 2054
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45119798 ctaaggcaggctacaggggccgcaagccctaataacccttcccacatttgacactgggtt 45119857

                                                                            
Query: 2055     tgggtgtcgtgtactgtgctcgtttattttgttctgagattaaagtatgcaaaataaaga 2114
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45119858 tgggtgtcgtgtactgtgctcgtttattttgttctgagattaaagtatgcaaaataaaga 45119917

                                
Query: 2115     agatgcagttttatac 2130
                ||||||||||||||||
Sbjct: 45119918 agatgcagttttatac 45119933



 Score =  668 bits (337), Expect = 0.0
 Identities = 337/337 (100%)
 Strand = Plus / Plus

                                                                            
Query: 1420     aggtgaccatctccaacaggcttgtgtcttcaccctgttgcattgtgaccagcacctatg 1479
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45119108 aggtgaccatctccaacaggcttgtgtcttcaccctgttgcattgtgaccagcacctatg 45119167

                                                                            
Query: 1480     gctggacagccaacatggagcgcatcatgaaagctcaggcacttcgggacaactcgacca 1539
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45119168 gctggacagccaacatggagcgcatcatgaaagctcaggcacttcgggacaactcgacca 45119227

                                                                            
Query: 1540     tgggctacatgatggccaaaaagcacctggagatcaaccctgaccaccccattgtggaga 1599
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45119228 tgggctacatgatggccaaaaagcacctggagatcaaccctgaccaccccattgtggaga 45119287

                                                                            
Query: 1600     cgctgcgacagaaggcagaggcggacaagaatgacaaggctgtcaaggacctagtggtgc 1659
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45119288 cgctgcgacagaaggcagaggcggacaagaatgacaaggctgtcaaggacctagtggtgc 45119347

                                                                            
Query: 1660     tgctgtttgaaacggcactgctgtcttctggcttctcgctggaagatccccagacccatt 1719
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45119348 tgctgtttgaaacggcactgctgtcttctggcttctcgctggaagatccccagacccatt 45119407

                                                     
Query: 1720     ccaaccgcatctaccgcatgatcaagcttggcctggg 1756
                |||||||||||||||||||||||||||||||||||||
Sbjct: 45119408 ccaaccgcatctaccgcatgatcaagcttggcctggg 45119444



 Score =  539 bits (272), Expect = e-150
 Identities = 272/272 (100%)
 Strand = Plus / Plus

                                                                            
Query: 1152     ggtgagagcaaggagcaggttgccaactctgcgtttgtggagcgtgtgcggaagcggggt 1211
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45118302 ggtgagagcaaggagcaggttgccaactctgcgtttgtggagcgtgtgcggaagcggggt 45118361

                                                                            
Query: 1212     ttcgaggtggtgtacatgacagagcccatcgacgagtactgtgtgcaacagctcaaggag 1271
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45118362 ttcgaggtggtgtacatgacagagcccatcgacgagtactgtgtgcaacagctcaaggag 45118421

                                                                            
Query: 1272     tttgatgggaagagcctggtctcagttaccaaggagggcctggagctgcctgaggatgag 1331
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45118422 tttgatgggaagagcctggtctcagttaccaaggagggcctggagctgcctgaggatgag 45118481

                                                                            
Query: 1332     gaggagaagaaaaagatggaggagagcaaggccaagtttgagaacctctgcaaactcatg 1391
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45118482 gaggagaagaaaaagatggaggagagcaaggccaagtttgagaacctctgcaaactcatg 45118541

                                                
Query: 1392     aaagagatcttggataagaaagtagagaaggt 1423
                ||||||||||||||||||||||||||||||||
Sbjct: 45118542 aaagagatcttggataagaaagtagagaaggt 45118573



 Score =  428 bits (216), Expect = e-117
 Identities = 216/216 (100%)
 Strand = Plus / Plus

                                                                            
Query: 432      cccaagattgaagatgtgggctcagatgaggaggatgatagtggcaaagataagaaaaag 491
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45116224 cccaagattgaagatgtgggctcagatgaggaggatgatagtggcaaagataagaaaaag 45116283

                                                                            
Query: 492      aagacaaaaaagatcaaggagaagtatattgatcaggaagaactgaacaagaccaagccc 551
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45116284 aagacaaaaaagatcaaggagaagtatattgatcaggaagaactgaacaagaccaagccc 45116343

                                                                            
Query: 552      atctggaccaggaaccctgatgacatcacccaggaggaatatggagagttctacaaaagc 611
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45116344 atctggaccaggaaccctgatgacatcacccaggaggaatatggagagttctacaaaagc 45116403

                                                    
Query: 612      ctgaccaatgactgggaagatcacctggcagtcaag 647
                ||||||||||||||||||||||||||||||||||||
Sbjct: 45116404 ctgaccaatgactgggaagatcacctggcagtcaag 45116439



 Score =  379 bits (191), Expect = e-102
 Identities = 191/191 (100%)
 Strand = Plus / Plus

                                                                            
Query: 814      acttcatccgcggtgtggttgactctgaagaccttcccctgaacatctcccgagaaatgc 873
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45117730 acttcatccgcggtgtggttgactctgaagaccttcccctgaacatctcccgagaaatgc 45117789

                                                                            
Query: 874      tccagcagagcaagattttgaaggtcattcgtaaaaacattgttaagaagtgcctggagc 933
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45117790 tccagcagagcaagattttgaaggtcattcgtaaaaacattgttaagaagtgcctggagc 45117849

                                                                            
Query: 934      tcttctctgagctggcagaagacaaggagaactacaagaaattctacgaggctttctcaa 993
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45117850 tcttctctgagctggcagaagacaaggagaactacaagaaattctacgaggctttctcaa 45117909

                           
Query: 994      aaaatctaaag 1004
                |||||||||||
Sbjct: 45117910 aaaatctaaag 45117920



 Score =  333 bits (168), Expect = 2e-88
 Identities = 168/168 (100%)
 Strand = Plus / Plus

                                                                            
Query: 646      agcacttctctgtagaaggtcagttggaattcagagcattgctgttcatcccccgtcggg 705
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45117112 agcacttctctgtagaaggtcagttggaattcagagcattgctgttcatcccccgtcggg 45117171

                                                                            
Query: 706      ctccttttgacctctttgagaacaaaaagaaaaagaacaacatcaaactttacgttcgcc 765
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45117172 ctccttttgacctctttgagaacaaaaagaaaaagaacaacatcaaactttacgttcgcc 45117231

                                                                
Query: 766      gtgtgttcatcatggacagctgcgatgagctgataccagagtacctca 813
                ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45117232 gtgtgttcatcatggacagctgcgatgagctgataccagagtacctca 45117279



 Score =  317 bits (160), Expect = 1e-83
 Identities = 163/164 (99%)
 Strand = Plus / Plus

                                                                            
Query: 43       aggctggcgcagacatctccatgattggacagtttggtgttggcttctattctgcctacc 102
                ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45115598 aggctggtgcagacatctccatgattggacagtttggtgttggcttctattctgcctacc 45115657

                                                                            
Query: 103      tggtggcagagaaagtggttgtgatcacaaagcacaatgatgatgaacagtatgcctggg 162
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45115658 tggtggcagagaaagtggttgtgatcacaaagcacaatgatgatgaacagtatgcctggg 45115717

                                                            
Query: 163      agtcttctgctgggggctccttcacagttcgtgctgaccatggt 206
                ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45115718 agtcttctgctgggggctccttcacagttcgtgctgaccatggt 45115761



 Score =  313 bits (158), Expect = 2e-82
 Identities = 158/158 (100%)
 Strand = Plus / Plus

                                                                            
Query: 1000     taaagcttggaatccatgaggactccactaatcggcggcgcctttctgagctgctgcgct 1059
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45118023 taaagcttggaatccatgaggactccactaatcggcggcgcctttctgagctgctgcgct 45118082

                                                                            
Query: 1060     accatacctcccagtctggcgatgagatgacttctctctcagagtacgtctcacgcatga 1119
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45118083 accatacctcccagtctggcgatgagatgacttctctctcagagtacgtctcacgcatga 45118142

                                                      
Query: 1120     aggagacccagaagtccatctactatatcactggtgag 1157
                ||||||||||||||||||||||||||||||||||||||
Sbjct: 45118143 aggagacccagaagtccatctactatatcactggtgag 45118180



 Score =  268 bits (135), Expect = 1e-68
 Identities = 135/135 (100%)
 Strand = Plus / Plus

                                                                            
Query: 204      ggtgagcccattggccgaggtaccaaggtcattctgcatcttaaggaggaccagacagaa 263
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45115903 ggtgagcccattggccgaggtaccaaggtcattctgcatcttaaggaggaccagacagaa 45115962

                                                                            
Query: 264      tacttagaagagagacgggtgaaagaggtggtaaagaagcactcacagttcataggttat 323
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45115963 tacttagaagagagacgggtgaaagaggtggtaaagaagcactcacagttcataggttat 45116022

                               
Query: 324      cccatcacactttat 338
                |||||||||||||||
Sbjct: 45116023 cccatcacactttat 45116037



 Score =  168 bits (85), Expect = 8e-39
 Identities = 226/273 (82%)
 Strand = Plus / Plus

                                                                             
Query: 1152      ggtgagagcaaggagcaggttgccaactctgcgtttgtggagcgtgtgcggaagcggggt 1211
                 ||||||| |||||| ||||| |||||||| || || ||||| ||| |||||||||  || 
Sbjct: 129759033 ggtgagaccaaggaccaggtggccaactcggccttcgtggaacgtctgcggaagcacggc 129759092

                                                                             
Query: 1212      ttcgaggtggtgtacatgacagagcccatcgacgagtactgtgtgcaacagctcaaggag 1271
                  | |||||| | |||||||  ||||||||||| |||||||||||||| ||||| ||||||
Sbjct: 129759093 ctggaggtgatctacatgatcgagcccatcgatgagtactgtgtgcagcagctgaaggag 129759152

                                                                             
Query: 1272      tttgatgggaagagcctggtctcagttaccaaggagggcctggagctgcctgaggatgag 1331
                 ||||| ||||||| | | || ||||| ||||| |||||||||||||| || || ||||| 
Sbjct: 129759153 tttgaggggaagaccttagtgtcagtcaccaaagagggcctggagctcccggaagatgaa 129759212

                                                                             
Query: 1332      gaggagaagaaaaagatggaggagagcaaggccaagtttgagaacctctgcaaactcatg 1391
                 ||||||||||| ||   ||||||||  ||| | |||||||| |||||||||||  |||||
Sbjct: 129759213 gaggagaagaagaaacaggaggagaagaagacaaagtttgaaaacctctgcaagatcatg 129759272

                                                  
Query: 1392      aaagagatcttggataagaaagtagagaaggtg 1424
                 || || |||||||| |||||||| || ||||||
Sbjct: 129759273 aaggacatcttggagaagaaagtcgaaaaggtg 129759305



 Score =  139 bits (70), Expect = 7e-30
 Identities = 244/302 (80%)
 Strand = Plus / Plus

                                                                             
Query: 1449      tcaccctgttgcattgtgaccagcacctatggctggacagccaacatggagcgcatcatg 1508
                 ||||| || |||||||| || ||||| || ||||||||||| ||||||||| | ||||||
Sbjct: 129759606 tcaccgtgctgcattgtcacaagcacatacggctggacagcaaacatggagagaatcatg 129759665

                                                                             
Query: 1509      aaagctcaggcacttcgggacaactcgaccatgggctacatgatggccaaaaagcacctg 1568
                 || ||||| || ||  | ||||||||||| ||||| ||||||   || || |||||||||
Sbjct: 129759666 aaggctcaagccctgagagacaactcgacaatgggttacatggcagcaaagaagcacctg 129759725

                                                                             
Query: 1569      gagatcaaccctgaccaccccattgtggagacgctgcgacagaaggcagaggcggacaag 1628
                 ||||| || || |||||  ||||  | ||||| ||| | || ||||||||||||||||||
Sbjct: 129759726 gagataaatccagaccattccatcatcgagaccctgaggcaaaaggcagaggcggacaag 129759785

                                                                             
Query: 1629      aatgacaaggctgtcaaggacctagtggtgctgctgtttgaaacggcactgctgtcttct 1688
                 || |||||| | || ||||| || ||  | |||||||  ||||| || ||||||||||||
Sbjct: 129759786 aacgacaagtccgtgaaggatctggtcatcctgctgtacgaaaccgctctgctgtcttct 129759845

                                                                             
Query: 1689      ggcttctcgctggaagatccccagacccattccaaccgcatctaccgcatgatcaagctt 1748
                 ||||||   ||||||||||||||||| ||  ||||| | |||||| | |||||||| |||
Sbjct: 129759846 ggcttcagcctggaagatccccagacgcacgccaacaggatctacaggatgatcaaactt 129759905

                   
Query: 1749      gg 1750
                 ||
Sbjct: 129759906 gg 129759907



 Score = 89.7 bits (45), Expect = 6e-15
 Identities = 45/45 (100%)
 Strand = Plus / Plus

                                                             
Query: 1        ccattgccaagtctggtactaaagcatttatggaggctcttcagg 45
                |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45115455 ccattgccaagtctggtactaaagcatttatggaggctcttcagg 45115499


>Sscrofa_Chr02 
||          Length = 162569375

 Score =  555 bits (280), Expect = e-155
 Identities = 786/946 (83%), Gaps = 49/946 (5%)
 Strand = Plus / Minus

                                                                            
Query: 1215     gaggtggtgtacatgacagagcccatcgacgagtactgtgtgcaacagc---tcaaggag 1271
                |||||||||| ||||||| | ||||  ||||||| ||| ||||| ||||   ||||||| 
Sbjct: 87696376 gaggtggtgtgcatgacacatcccactgacgagtcctgcgtgcagcagcagctcaaggaa 87696317

                                                                            
Query: 1272     tttgatgggaagagcctggtctcagttaccaaggagggcctggagctgcctgaggatgag 1331
                |||||||| ||||||||| | |||| ||||||||||||||||||||||||||||||||||
Sbjct: 87696316 tttgatggcaagagcctgatttcagctaccaaggagggcctggagctgcctgaggatgag 87696257

                                                                            
Query: 1332     gaggagaagaaaaagatggaggagagcaaggccaagtttgagaacctctgcaaactcatg 1391
                ||||||| ||  ||| |||||||| ||||||||||||||||||| |||||||||||||||
Sbjct: 87696256 gaggagaggaggaaggtggaggagggcaaggccaagtttgagaagctctgcaaactcatg 87696197

                                                                            
Query: 1392     aaagagatcttggataagaaagtagagaaggtgaccatctccaacaggcttgtgtcttca 1451
                ||||| ||||||||| |||| |||||| ||||||||| || |||||| || ||||| |||
Sbjct: 87696196 aaagaaatcttggatcagaaggtagag-aggtgaccaccttcaacagactcgtgtcgtca 87696138

                                                                            
Query: 1452     ccctgttgcattgtgaccagcacctatggctggacagccaacatggagcgcatcatgaaa 1511
                |||| |||| ||||||| || |||| |||  |||||||||||||||||| |||| |||||
Sbjct: 87696137 ccctcttgccttgtgactaggacctctggggggacagccaacatggagctcatcgtgaaa 87696078

                                                                            
Query: 1512     gctc--aggcacttcgggacaactcgaccatgggctacatgatggcc-aaaaagcacctg 1568
                ||||  || ||||||| || ||  | ||||||||||||||||||||| ||||||||||||
Sbjct: 87696077 gctcagagacacttcgagataatgcaaccatgggctacatgatggccaaaaaagcacctg 87696018

                                                                            
Query: 1569     gagatcaaccctgaccaccccattgtggagacgctgcgacagaaggcagaggcggacaag 1628
                ||||||||||||||||||| |||  ||||||| ||||||||| || ||| || |||||||
Sbjct: 87696017 gagatcaaccctgaccacctcatcatggagacactgcgacagcagacaggggtggacaag 87695958

                                                                            
Query: 1629     aatgacaaggctgtcaaggacctagtggtgctgctgtttgaaacggcactgctgtcttct 1688
                || ||||||||||||| |||||||| ||||||||||||||||||   |||||| ||||| 
Sbjct: 87695957 aacgacaaggctgtcagggacctaggggtgctgctgtttgaaaccaaactgctttcttcc 87695898

                                                                            
Query: 1689     ggcttctcgctggaagatccccagacccattccaaccgcatctaccgcatgatcaagctt 1748
                 ||||||| ||||| |||||||| ||||| |||||||||||||| | ||||| ||| |  
Sbjct: 87695897 agcttctcactggaggatccccaaacccactccaaccgcatctatcacatgaccaaacga 87695838

                                                                            
Query: 1749     ggcctgggcattgatgaggacgaagtgacagcagag--gagcccagtgctgctgttcctg 1806
                |||||||||  ||| ||  | |||| | | ||||||  |||||||||||||||| |||||
Sbjct: 87695837 ggcctgggccctgacgaaaatgaagcggcggcagaggagagcccagtgctgctggtcctg 87695778

                                                                            
Query: 1807     atgagatc----ccccc-----------gctcgagggtgatgaggatgcatctcgcatgg 1851
                ||||||||    ||| |            |||||||| ||||||||||| ||||||||||
Sbjct: 87695777 atgagatctgtgcccactccctccctggcctcgagggggatgaggatgcctctcgcatgg 87695718

                                                                            
Query: 1852     aagaagtagattaggagttgctacctgcaaactttgttccctctgtatagtgtccccatt 1911
                |||||| ||||||| |||| |||||         || ||||||||||||||||||||| |
Sbjct: 87695717 aagaaggagattagaagtttctacc---------tgatccctctgtatagtgtcccca-t 87695668

                                                                            
Query: 1912     ggctcccctggcagcagcccccagtggccct-agcccacctggtctcctctgctgatgtc 1970
                || |||||  ||||||| |||||||||||||  ||||||| |||  ||||||| ||||||
Sbjct: 87695667 ggttccccccgcagcag-ccccagtggccctgggcccaccaggttccctctgccgatgtc 87695609

                                                                            
Query: 1971     tagtggtttta--tttgtttt----tctgtctaaggcaggctacaggggccgcaagccct 2024
                |  ||||||||  | ||||||    ||||||| |||||||||||| ||||  || | || 
Sbjct: 87695608 tgctggttttatgtctgtttttctgtctgtctgaggcaggctacaagggctacaggtcc- 87695550

                                                                            
Query: 2025     aataacccttcccacatttgacactgggtttgggtgtcgtgtactgtgctcgtttatttt 2084
                  |||||||||||||||||||||||| |||||| || | ||||||||    |||||||||
Sbjct: 87695549 --taacccttcccacatttgacactgagtttggatggcatgtactgt----gtttatttt 87695496

                                                              
Query: 2085     gttctgagattaaagtatgcaaaataaagaagatgcagttttatac 2130
                ||||||| ||| ||||||||||||||||||||||| ||||||||||
Sbjct: 87695495 gttctgaaattcaagtatgcaaaataaagaagatgaagttttatac 87695450



 Score =  182 bits (92), Expect = 5e-43
 Identities = 292/357 (81%), Gaps = 5/357 (1%)
 Strand = Plus / Minus

                                                                            
Query: 811      tcaacttcatccgcggtgtggttgactctgaagaccttcccctgaacatctcccgagaaa 870
                ||||||||||||  |||||| ||| |||||||||| |||||| |||| |||||| |||||
Sbjct: 87696759 tcaacttcatccatggtgtgcttgcctctgaagactttccccggaacctctcccaagaaa 87696700

                                                                            
Query: 871      tgctccagcagagcaagattttgaaggtcattcgtaaaaacattgttaagaagtgcctgg 930
                ||||||||||||||    || ||||| || ||||||||||||  |||| |||||||||||
Sbjct: 87696699 tgctccagcagagcccagttctgaagctctttcgtaaaaacacagttacgaagtgcctgg 87696640

                                                                            
Query: 931      agctcttctctgagctggcagaagacaaggagaactacaagaaattctacgaggctttct 990
                 ||||||||||||||||||||||||||||| ||||  ||||||  |||| |  || ||||
Sbjct: 87696639 cgctcttctctgagctggcagaagacaaggtgaacgccaagaacatctatgcagccttct 87696580

                                                                            
Query: 991      caaaaaatctaaagcttggaatccatgaggactccactaatcggcggcgcctttctgagc 1050
                |||||| || |||||||||| ||||  ||||| || || |||||| | ||| | | ||||
Sbjct: 87696579 caaaaactcgaaagcttggactccacaaggacgcccctcatcggcagtgccctcccgagc 87696520

                                                                            
Query: 1051     tgctgcgctaccatacctcccagtctggcgatgagatgact----tctctctcagagtac 1106
                |||||| |||||| | |  |  ||| || ||||||||||||    |||||||||||||| 
Sbjct: 87696519 tgctgcactaccacatcatctcgtccggagatgagatgactcctctctctctcagagtat 87696460

                                                                         
Query: 1107     gtctcacgcatgaaggagacccagaagtccatctactatatcactggtgagagcaag 1163
                ||||  |||||| |||||||||||   |||||| ||||   ||||||||||||||||
Sbjct: 87696459 gtctttcgcatg-aggagacccaggcatccatcgactaccgcactggtgagagcaag 87696404


>Sscrofa_Chr05 
||          Length = 111506441

 Score =  167 bits (84), Expect = 3e-38
 Identities = 252/305 (82%), Gaps = 26/305 (8%)
 Strand = Plus / Plus

                                                                            
Query: 1834     aggatgcatctcgcatggaagaagtagattaggagttgctacctgcaaactttgttccct 1893
                ||||||| ||| ||||||||||||||||||||||  |||||||| || ||||||||||||
Sbjct: 51400692 aggatgcctctagcatggaagaagtagattaggaactgctacctacagactttgttccct 51400751

                                                                            
Query: 1894     ctgtatagtgtccccattggctcccctggcagcagcccccagtggccctagcccacctgg 1953
                |||||||||||||||| |||||||||  ||||||  ||||||||||||| |||||||| |
Sbjct: 51400752 ctgtatagtgtcccca-tggctcccc-agcagca--ccccagtggccctggcccaccttg 51400807

                                                                            
Query: 1954     tctcctctgctgatgtctagtggttttatt--tgtttttctgtctaaggcaggctacagg 2011
                |  ||||||||||||||| |||||||||||  ||| ||||||||||| ||||  ||    
Sbjct: 51400808 ttccctctgctgatgtcttgtggttttatttctgtctttctgtctaaagcagaata---- 51400863

                                                                            
Query: 2012     ggccgcaagccctaataacccttcccacatttgacactgggtttgggtgtcgtgtactgt 2071
                     |||||||   |||||||||| || ||||||| ||||||||| ||| |||||||||
Sbjct: 51400864 -----caagccc---taacccttcctacctttgacattgggtttggatgttgtgtactgt 51400915

                                                                            
Query: 2072     gctcgttta--------ttttgttctgagattaaagtatgcaaaataaagaagatgcagt 2123
                | |  ||||        ||||||||||| ||| |||||| ||||||||||||||||||||
Sbjct: 51400916 gttattttattttatttttttgttctgaaattgaagtatacaaaataaagaagatgcagt 51400975

                     
Query: 2124     tttat 2128
                |||||
Sbjct: 51400976 tttat 51400980



 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 49/55 (89%)
 Strand = Plus / Minus

                                                                       
Query: 64       tgattggacagtttggtgttggcttctattctgcctacctggtggcagagaaagt 118
                ||||||| ||||| |||||||||||||||||||||| ||| || ||||| |||||
Sbjct: 84079690 tgattggccagttcggtgttggcttctattctgccttccttgtagcagataaagt 84079636


>gb|GL894619.1| Sus scrofa unplaced genomic scaffold chrU_scaffold3266
          Length = 137947

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 46/51 (90%)
 Strand = Plus / Plus

                                                               
Query: 1934 agtggccctagcccacctggtctcctctgctgatgtctagtggttttattt 1984
            ||||| ||| |||||||||||  |||||||||||||||||||| |||||||
Sbjct: 6445 agtggtcctggcccacctggttccctctgctgatgtctagtggctttattt 6495


>Sscrofa_Chr01 
||          Length = 315321322

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 46/51 (90%)
 Strand = Plus / Minus

                                                                    
Query: 1934      agtggccctagcccacctggtctcctctgctgatgtctagtggttttattt 1984
                 ||||| ||| |||||||||||  |||||||||||||||||||| |||||||
Sbjct: 219086205 agtggtcctggcccacctggttccctctgctgatgtctagtggctttattt 219086155


  Database: Sscrofa_10.2.fasta
    Posted date:  Nov 16, 2011 10:34 AM
  Number of letters in database: 2,808,509,378
  Number of sequences in database:  4582
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 67,690,482
Number of extensions: 815
Number of successful extensions: 815
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 808
Number of HSP's successfully gapped: 22
Length of query: 2145
Length of database: 2,808,509,378
Length adjustment: 22
Effective length of query: 2123
Effective length of database: 2,808,408,574
Effective search space: 5962251402602
Effective search space used: 5962251402602
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)