Animal-Genome cDNA 20110601C-001912


Search to RefSeqBP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-001912
         (1017 letters)

Database: RefSeq49_BP.fasta 
           33,088 sequences; 17,681,374 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001069592.1| glucose-6-phosphatase [Bos taurus].               307   e-167
Alignment   gi|NP_001178975.1| glucose-6-phosphatase 2 [Bos taurus].             172   6e-43
Alignment   gi|XP_002685355.1| PREDICTED: islet-specific glucose-6-phosphat...   172   6e-43
Alignment   gi|NP_899208.2| glucose-6-phosphatase 3 [Bos taurus].                112   4e-25

>ref|NP_001069592.1| glucose-6-phosphatase [Bos taurus].
          Length = 357

 Score =  307 bits (787), Expect(2) = e-167
 Identities = 153/165 (92%), Positives = 157/165 (95%)
 Frame = +1

Query: 523  GIAVAETFRHIQSIYNASLKKYFLITFFLFSFAIGFYLLLKGLGVDLSWTLEKAKRRCER 702
            GIAVAETFRHIQSIYNASLKKYFLIT FLFSFAIGFYLLLK LGVDL WTLEKAKRRCER
Sbjct: 188  GIAVAETFRHIQSIYNASLKKYFLITCFLFSFAIGFYLLLKWLGVDLLWTLEKAKRRCER 247

Query: 703  PEWVHIDTTPFASLLKNVGTLFGLGLALNSSMYRQGCKGKLSKWFPFRLSCIVASLVLLH 882
            PEWVHIDTTPFASLLKN+GTLFGLGLALNSSMYR+ CKGKLSKWFPFRLSCIVASLVLLH
Sbjct: 248  PEWVHIDTTPFASLLKNLGTLFGLGLALNSSMYRESCKGKLSKWFPFRLSCIVASLVLLH 307

Query: 883  FFDSLKPPSQIELIFYVLSFLQSAAVPLASVSLIPYCLSRALGQP 1017
             FDSLKPPSQIELIFYVLSF +SAAVPLASVSLIPYCL+  LGQP
Sbjct: 308  LFDSLKPPSQIELIFYVLSFCKSAAVPLASVSLIPYCLAWVLGQP 352



 Score =  298 bits (764), Expect(2) = e-167
 Identities = 139/149 (93%), Positives = 144/149 (96%)
 Frame = +3

Query: 78  MEEGMNLLHNFGIQSTRYLQVNYQDSQDWFILVSVIADLRNAFYVLFPIWFHLQEAVGIK 257
           ME+GMN+LH+FGIQST YLQVNYQ+SQDWFILVSVIADLRNAFYVLFPIWFHL+EAVGIK
Sbjct: 1   MEKGMNVLHDFGIQSTHYLQVNYQNSQDWFILVSVIADLRNAFYVLFPIWFHLREAVGIK 60

Query: 258 LLWVAVIGDWLNLVFKWILFGQRPYWWVLDTDYYSNTSVPLIKQFPVTCETGPGSPSGHA 437
           LLWVAVIGDWLNLVFKWILFGQRPYWWVLDTDYYSNTS PLIKQFPVTCETGPGSPSGHA
Sbjct: 61  LLWVAVIGDWLNLVFKWILFGQRPYWWVLDTDYYSNTSAPLIKQFPVTCETGPGSPSGHA 120

Query: 438 MGTAGVYYVMVTSALSIIRGKKKPTYGFR 524
           MGTAGVYYVMVTS LSI RGKKKPTY FR
Sbjct: 121 MGTAGVYYVMVTSTLSIFRGKKKPTYRFR 149


>ref|NP_001178975.1| glucose-6-phosphatase 2 [Bos taurus].
          Length = 355

 Score =  172 bits (435), Expect = 6e-43
 Identities = 75/132 (56%), Positives = 98/132 (74%)
 Frame = +3

Query: 90  MNLLHNFGIQSTRYLQVNYQDSQDWFILVSVIADLRNAFYVLFPIWFHLQEAVGIKLLWV 269
           M+ LH  G+   ++LQ +Y+   ++   +S + D RN F + FP+WF L + VG K++WV
Sbjct: 1   MDFLHRNGVLVIQHLQKDYRAYYNFLNFMSNVGDPRNIFSIYFPLWFQLNQTVGTKMIWV 60

Query: 270 AVIGDWLNLVFKWILFGQRPYWWVLDTDYYSNTSVPLIKQFPVTCETGPGSPSGHAMGTA 449
           AVIGDW NL+FKWILFG RPYWWV +T  Y N S P ++QFP TCETGPGSPSGHAMG++
Sbjct: 61  AVIGDWFNLIFKWILFGHRPYWWVQETQIYPNHSSPCLEQFPTTCETGPGSPSGHAMGSS 120

Query: 450 GVYYVMVTSALS 485
            V+YVMVT+ALS
Sbjct: 121 CVWYVMVTAALS 132



 Score =  168 bits (426), Expect = 6e-42
 Identities = 78/158 (49%), Positives = 106/158 (67%)
 Frame = +1

Query: 523 GIAVAETFRHIQSIYNASLKKYFLITFFLFSFAIGFYLLLKGLGVDLSWTLEKAKRRCER 702
           G+ VAE F +   I  ASL  Y     FLF FA+GFYLLL+ L +DL W++  AK+ C  
Sbjct: 186 GVLVAEIFEYTPGIQTASLSVYLKTNLFLFLFALGFYLLLRHLDIDLLWSVPIAKKWCAN 245

Query: 703 PEWVHIDTTPFASLLKNVGTLFGLGLALNSSMYRQGCKGKLSKWFPFRLSCIVASLVLLH 882
           P+W+HIDTTPFA L++N+G LFGLG A+NS M+ + C+G+      FRL C + SL  L 
Sbjct: 246 PDWIHIDTTPFAGLVRNLGVLFGLGFAINSEMFLRSCRGENGYGLSFRLLCALVSLTTLQ 305

Query: 883 FFDSLKPPSQIELIFYVLSFLQSAAVPLASVSLIPYCL 996
            +  +K P+  E +FYVLSF +SA++PL  V+LIPYC+
Sbjct: 306 LYHFIKIPTDTEYLFYVLSFCKSASIPLTVVALIPYCI 343


>ref|XP_002685355.1| PREDICTED: islet-specific glucose-6-phosphatase-related
           protein-like [Bos taurus].
          Length = 355

 Score =  172 bits (435), Expect = 6e-43
 Identities = 75/132 (56%), Positives = 98/132 (74%)
 Frame = +3

Query: 90  MNLLHNFGIQSTRYLQVNYQDSQDWFILVSVIADLRNAFYVLFPIWFHLQEAVGIKLLWV 269
           M+ LH  G+   ++LQ +Y+   ++   +S + D RN F + FP+WF L + VG K++WV
Sbjct: 1   MDFLHRNGVLVIQHLQKDYRAYYNFLNFMSNVGDPRNIFSIYFPLWFQLNQTVGTKMIWV 60

Query: 270 AVIGDWLNLVFKWILFGQRPYWWVLDTDYYSNTSVPLIKQFPVTCETGPGSPSGHAMGTA 449
           AVIGDW NL+FKWILFG RPYWWV +T  Y N S P ++QFP TCETGPGSPSGHAMG++
Sbjct: 61  AVIGDWFNLIFKWILFGHRPYWWVQETQIYPNHSSPCLEQFPTTCETGPGSPSGHAMGSS 120

Query: 450 GVYYVMVTSALS 485
            V+YVMVT+ALS
Sbjct: 121 CVWYVMVTAALS 132



 Score =  168 bits (426), Expect = 6e-42
 Identities = 78/158 (49%), Positives = 106/158 (67%)
 Frame = +1

Query: 523 GIAVAETFRHIQSIYNASLKKYFLITFFLFSFAIGFYLLLKGLGVDLSWTLEKAKRRCER 702
           G+ VAE F +   I  ASL  Y     FLF FA+GFYLLL+ L +DL W++  AK+ C  
Sbjct: 186 GVLVAEIFEYTPGIQTASLSVYLKTNLFLFLFALGFYLLLRHLDIDLLWSVPIAKKWCAN 245

Query: 703 PEWVHIDTTPFASLLKNVGTLFGLGLALNSSMYRQGCKGKLSKWFPFRLSCIVASLVLLH 882
           P+W+HIDTTPFA L++N+G LFGLG A+NS M+ + C+G+      FRL C + SL  L 
Sbjct: 246 PDWIHIDTTPFAGLVRNLGVLFGLGFAINSEMFLRSCRGENGYGLSFRLLCALVSLTTLQ 305

Query: 883 FFDSLKPPSQIELIFYVLSFLQSAAVPLASVSLIPYCL 996
            +  +K P+  E +FYVLSF +SA++PL  V+LIPYC+
Sbjct: 306 LYHFIKIPTDTEYLFYVLSFCKSASIPLTVVALIPYCI 343


>ref|NP_899208.2| glucose-6-phosphatase 3 [Bos taurus].
          Length = 346

 Score =  112 bits (281), Expect = 4e-25
 Identities = 52/125 (41%), Positives = 76/125 (60%)
 Frame = +3

Query: 111 GIQSTRYLQVNYQDSQDWFILVSVIADLRNAFYVLFPIWFHLQEAVGIKLLWVAVIGDWL 290
           GI     LQ      ++ ++ V+ + D ++ F   FP  ++    VGI +LW+++I +WL
Sbjct: 8   GIAMAEALQNQLPWLENVWLWVTFLGDPKSLFLFYFPAAYYASRRVGIAVLWISLITEWL 67

Query: 291 NLVFKWILFGQRPYWWVLDTDYYSNTSVPLIKQFPVTCETGPGSPSGHAMGTAGVYYVMV 470
           NLVFKW LFG RP+WWV ++ YYS      + QFP +CETGPGSPSGH M T    + ++
Sbjct: 68  NLVFKWFLFGDRPFWWVHESGYYSQAPAQ-VHQFPSSCETGPGSPSGHCMITGAALWPIM 126

Query: 471 TSALS 485
           T+  S
Sbjct: 127 TAVSS 131



 Score = 92.8 bits (229), Expect = 4e-19
 Identities = 55/138 (39%), Positives = 80/138 (57%)
 Frame = +1

Query: 577 LKKYFLITFFLFSFAIGFYLLLKGLGVDLSWTLEKAKRRCERPEWVHIDTTPFASLLKNV 756
           L  Y L +  L   A   Y  L  LG+DLSW++  A + CERPEWVH+D+ PFASL ++ 
Sbjct: 196 LSFYGLTSLALLLGASLIYWTLFTLGLDLSWSINLASKWCERPEWVHLDSRPFASLSRDS 255

Query: 757 GTLFGLGLALNSSMYRQGCKGKLSKWFPFRLSCIVASLVLLHFFDSLKPPSQIELIFYVL 936
           G   GLG+AL+S  Y Q  +  L   +  +L C+V ++ LL   + L  P QI L FY+ 
Sbjct: 256 GAALGLGIALHSPCYAQVRRAHLG--YGQKLVCLVLAMGLLGPLNWLGYPPQISL-FYIF 312

Query: 937 SFLQSAAVPLASVSLIPY 990
           +FL+    P   ++L+P+
Sbjct: 313 NFLKYTLWPCLVLALVPW 330


  Database: RefSeq49_BP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 17,681,374
  Number of sequences in database:  33,088
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 38,714,929
Number of extensions: 1052861
Number of successful extensions: 3767
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 3759
Number of HSP's successfully gapped: 8
Length of query: 339
Length of database: 17,681,374
Length adjustment: 103
Effective length of query: 236
Effective length of database: 14,273,310
Effective search space: 3368501160
Effective search space used: 3368501160
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)

Search to RefSeqCP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-001912
         (1017 letters)

Database: RefSeq49_CP.fasta 
           33,336 sequences; 18,874,504 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_855553.1| PREDICTED: glucose-6-phosphatase [Canis familia...   303   e-165
Alignment   gi|NP_001002993.1| glucose-6-phosphatase [Canis lupus familiari...   301   e-164
Alignment   gi|XP_545511.2| PREDICTED: similar to glucose-6-phosphatase, ca...   173   2e-43
Alignment   gi|XP_548065.2| PREDICTED: similar to glucose-6-phosphatase cat...   114   1e-25

>ref|XP_855553.1| PREDICTED: glucose-6-phosphatase [Canis familiaris].
          Length = 357

 Score =  303 bits (775), Expect(2) = e-165
 Identities = 148/165 (89%), Positives = 154/165 (93%)
 Frame = +1

Query: 523  GIAVAETFRHIQSIYNASLKKYFLITFFLFSFAIGFYLLLKGLGVDLSWTLEKAKRRCER 702
            GIAVAETFRHIQSIYNASLKKYFLITFFLFSFAIGFYLLLKGLGVDL WTLEKA+R CER
Sbjct: 188  GIAVAETFRHIQSIYNASLKKYFLITFFLFSFAIGFYLLLKGLGVDLLWTLEKARRWCER 247

Query: 703  PEWVHIDTTPFASLLKNVGTLFGLGLALNSSMYRQGCKGKLSKWFPFRLSCIVASLVLLH 882
            PEWVHIDTTPFASLLKNVGTLFGLG+ALNSSMYR+ CKGKLSKWFPFRLSCIV SL+LLH
Sbjct: 248  PEWVHIDTTPFASLLKNVGTLFGLGVALNSSMYRESCKGKLSKWFPFRLSCIVVSLILLH 307

Query: 883  FFDSLKPPSQIELIFYVLSFLQSAAVPLASVSLIPYCLSRALGQP 1017
             FDSLKPPSQ ELIFY LSF +SAAVPLASVSLIPYCL+R   QP
Sbjct: 308  LFDSLKPPSQTELIFYTLSFCKSAAVPLASVSLIPYCLARVFDQP 352



 Score =  297 bits (760), Expect(2) = e-165
 Identities = 137/149 (91%), Positives = 145/149 (97%)
 Frame = +3

Query: 78  MEEGMNLLHNFGIQSTRYLQVNYQDSQDWFILVSVIADLRNAFYVLFPIWFHLQEAVGIK 257
           ME+GM++LH+FGIQST YLQVNYQDSQDWFILVSVIADLRNAFYVLFPIWFHL+EAVGIK
Sbjct: 1   MEKGMDVLHDFGIQSTHYLQVNYQDSQDWFILVSVIADLRNAFYVLFPIWFHLREAVGIK 60

Query: 258 LLWVAVIGDWLNLVFKWILFGQRPYWWVLDTDYYSNTSVPLIKQFPVTCETGPGSPSGHA 437
           LLWVAVIGDWLNLVFKWILFGQRPYWWV+DTDYYSNTSVPLIKQFPVTCETGPGSPSGHA
Sbjct: 61  LLWVAVIGDWLNLVFKWILFGQRPYWWVMDTDYYSNTSVPLIKQFPVTCETGPGSPSGHA 120

Query: 438 MGTAGVYYVMVTSALSIIRGKKKPTYGFR 524
           MGTAGVYYVMVTS LSI RG+K+PTY FR
Sbjct: 121 MGTAGVYYVMVTSTLSIFRGRKRPTYRFR 149


>ref|NP_001002993.1| glucose-6-phosphatase [Canis lupus familiaris].
          Length = 357

 Score =  301 bits (771), Expect(2) = e-164
 Identities = 147/165 (89%), Positives = 153/165 (92%)
 Frame = +1

Query: 523  GIAVAETFRHIQSIYNASLKKYFLITFFLFSFAIGFYLLLKGLGVDLSWTLEKAKRRCER 702
            GIAVAETFRHIQSIYNASLKKYFLITFFLFSFAIGFYLLLKGLGVDL WTLEKA+R CER
Sbjct: 188  GIAVAETFRHIQSIYNASLKKYFLITFFLFSFAIGFYLLLKGLGVDLLWTLEKARRWCER 247

Query: 703  PEWVHIDTTPFASLLKNVGTLFGLGLALNSSMYRQGCKGKLSKWFPFRLSCIVASLVLLH 882
            PEWVHIDTTPFASLLKNVGTLFGLG+ LNSSMYR+ CKGKLSKWFPFRLSCIV SL+LLH
Sbjct: 248  PEWVHIDTTPFASLLKNVGTLFGLGVTLNSSMYRESCKGKLSKWFPFRLSCIVVSLILLH 307

Query: 883  FFDSLKPPSQIELIFYVLSFLQSAAVPLASVSLIPYCLSRALGQP 1017
             FDSLKPPSQ ELIFY LSF +SAAVPLASVSLIPYCL+R   QP
Sbjct: 308  LFDSLKPPSQTELIFYTLSFCKSAAVPLASVSLIPYCLARVFDQP 352



 Score =  297 bits (760), Expect(2) = e-164
 Identities = 137/149 (91%), Positives = 145/149 (97%)
 Frame = +3

Query: 78  MEEGMNLLHNFGIQSTRYLQVNYQDSQDWFILVSVIADLRNAFYVLFPIWFHLQEAVGIK 257
           ME+GM++LH+FGIQST YLQVNYQDSQDWFILVSVIADLRNAFYVLFPIWFHL+EAVGIK
Sbjct: 1   MEKGMDVLHDFGIQSTHYLQVNYQDSQDWFILVSVIADLRNAFYVLFPIWFHLREAVGIK 60

Query: 258 LLWVAVIGDWLNLVFKWILFGQRPYWWVLDTDYYSNTSVPLIKQFPVTCETGPGSPSGHA 437
           LLWVAVIGDWLNLVFKWILFGQRPYWWV+DTDYYSNTSVPLIKQFPVTCETGPGSPSGHA
Sbjct: 61  LLWVAVIGDWLNLVFKWILFGQRPYWWVMDTDYYSNTSVPLIKQFPVTCETGPGSPSGHA 120

Query: 438 MGTAGVYYVMVTSALSIIRGKKKPTYGFR 524
           MGTAGVYYVMVTS LSI RG+K+PTY FR
Sbjct: 121 MGTAGVYYVMVTSTLSIFRGRKRPTYRFR 149


>ref|XP_545511.2| PREDICTED: similar to glucose-6-phosphatase, catalytic, related
           [Canis familiaris].
          Length = 371

 Score =  173 bits (439), Expect = 2e-43
 Identities = 75/141 (53%), Positives = 103/141 (73%)
 Frame = +3

Query: 63  GQRVRMEEGMNLLHNFGIQSTRYLQVNYQDSQDWFILVSVIADLRNAFYVLFPIWFHLQE 242
           G  ++ +  M+ LH  G+ + ++LQ +Y+   ++   +S + D RN F + FP+WF L +
Sbjct: 7   GAGLQEKSKMDFLHRNGVLAIQHLQKDYRAYYNFLNFMSNVGDPRNIFSIYFPLWFQLNQ 66

Query: 243 AVGIKLLWVAVIGDWLNLVFKWILFGQRPYWWVLDTDYYSNTSVPLIKQFPVTCETGPGS 422
            +G K++WVAVIGDW NL+FKWILFG RPYWWV +T  Y N S P ++QFP TCETGPGS
Sbjct: 67  TIGTKMIWVAVIGDWFNLIFKWILFGHRPYWWVQETQIYPNHSSPCLEQFPTTCETGPGS 126

Query: 423 PSGHAMGTAGVYYVMVTSALS 485
           PSGHAMG++ V+YVMVT+ALS
Sbjct: 127 PSGHAMGSSCVWYVMVTAALS 147



 Score =  169 bits (428), Expect = 4e-42
 Identities = 80/158 (50%), Positives = 107/158 (67%)
 Frame = +1

Query: 523 GIAVAETFRHIQSIYNASLKKYFLITFFLFSFAIGFYLLLKGLGVDLSWTLEKAKRRCER 702
           G+ VAE F H   I  ASL  Y     FLF FA+GFYLLL+ L +DL W++  AK+ C  
Sbjct: 202 GMLVAEAFEHTPGIQTASLSTYLKTNLFLFLFALGFYLLLRLLDIDLLWSVPIAKKWCAN 261

Query: 703 PEWVHIDTTPFASLLKNVGTLFGLGLALNSSMYRQGCKGKLSKWFPFRLSCIVASLVLLH 882
           P+W+HIDTTPFA L++N+G LFGLG A+NS M+ + C+G+      FRL C  ASL+ L 
Sbjct: 262 PDWIHIDTTPFAGLVRNLGVLFGLGFAINSEMFLRSCRGENGYKLSFRLLCAGASLMTLQ 321

Query: 883 FFDSLKPPSQIELIFYVLSFLQSAAVPLASVSLIPYCL 996
            +  +K P+  E +FYVLSF +SA++PL  V+LIPYC+
Sbjct: 322 LYHFIKIPTHAEHLFYVLSFCKSASIPLTVVALIPYCI 359


>ref|XP_548065.2| PREDICTED: similar to glucose-6-phosphatase catalytic subunit 3
           [Canis familiaris].
          Length = 346

 Score =  114 bits (286), Expect = 1e-25
 Identities = 53/130 (40%), Positives = 79/130 (60%)
 Frame = +3

Query: 111 GIQSTRYLQVNYQDSQDWFILVSVIADLRNAFYVLFPIWFHLQEAVGIKLLWVAVIGDWL 290
           GI     LQ      ++ ++ V+ + D ++ F   FP  ++    VGI +LW+++I +WL
Sbjct: 8   GIAMAEALQNQLPWLENVWLWVTFLGDPKSLFLFYFPAAYYTSRRVGIAVLWISLITEWL 67

Query: 291 NLVFKWILFGQRPYWWVLDTDYYSNTSVPLIKQFPVTCETGPGSPSGHAMGTAGVYYVMV 470
           NLVFKW LFG RPYWWV ++ YYS+     + QFP +CETGPGSPSGH M T    + ++
Sbjct: 68  NLVFKWFLFGDRPYWWVHESGYYSHAPAQ-VHQFPSSCETGPGSPSGHCMITGAALWPIM 126

Query: 471 TSALSIIRGK 500
           T+  S +  +
Sbjct: 127 TAISSQVASR 136



 Score = 96.7 bits (239), Expect = 3e-20
 Identities = 55/138 (39%), Positives = 82/138 (59%)
 Frame = +1

Query: 577 LKKYFLITFFLFSFAIGFYLLLKGLGVDLSWTLEKAKRRCERPEWVHIDTTPFASLLKNV 756
           L  Y L +  L   A   Y +L  LG+DLSW++  A + CERPEWVH+D+ PFASL ++ 
Sbjct: 196 LSFYGLTSLALLLGASLIYWILVTLGLDLSWSIRLASKWCERPEWVHVDSRPFASLSRDS 255

Query: 757 GTLFGLGLALNSSMYRQGCKGKLSKWFPFRLSCIVASLVLLHFFDSLKPPSQIELIFYVL 936
           G   GLG+AL+S  Y Q  + +L      +++C+V ++ LL   D L  P QI L FY+ 
Sbjct: 256 GAALGLGIALHSPCYTQVRRAQLG--HGQKIACLVLAMGLLGPLDWLGHPPQISL-FYIF 312

Query: 937 SFLQSAAVPLASVSLIPY 990
           +FL+    P   ++L+P+
Sbjct: 313 NFLKFTLWPCLVLALVPW 330


  Database: RefSeq49_CP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,874,504
  Number of sequences in database:  33,336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 40,320,199
Number of extensions: 1074907
Number of successful extensions: 3674
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 3672
Number of HSP's successfully gapped: 8
Length of query: 339
Length of database: 18,874,504
Length adjustment: 103
Effective length of query: 236
Effective length of database: 15,440,896
Effective search space: 3644051456
Effective search space used: 3644051456
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)

Search to RefSeqHP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-001912
         (1017 letters)

Database: RefSeq49_HP.fasta 
           32,964 sequences; 18,297,164 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_000142.1| glucose-6-phosphatase [Homo sapiens].                300   e-163
Alignment   gi|NP_001075155.1| glucose-6-phosphatase 2 isoform 2 [Homo sapi...   167   1e-41
Alignment   gi|NP_066999.1| glucose-6-phosphatase 2 isoform 1 [Homo sapiens].    167   1e-41
Alignment   gi|NP_612396.1| glucose-6-phosphatase 3 [Homo sapiens].              109   5e-24

>ref|NP_000142.1| glucose-6-phosphatase [Homo sapiens].
          Length = 357

 Score =  300 bits (769), Expect(2) = e-163
 Identities = 141/149 (94%), Positives = 144/149 (96%)
 Frame = +3

Query: 78  MEEGMNLLHNFGIQSTRYLQVNYQDSQDWFILVSVIADLRNAFYVLFPIWFHLQEAVGIK 257
           MEEGMN+LH+FGIQST YLQVNYQDSQDWFILVSVIADLRNAFYVLFPIWFHLQEAVGIK
Sbjct: 1   MEEGMNVLHDFGIQSTHYLQVNYQDSQDWFILVSVIADLRNAFYVLFPIWFHLQEAVGIK 60

Query: 258 LLWVAVIGDWLNLVFKWILFGQRPYWWVLDTDYYSNTSVPLIKQFPVTCETGPGSPSGHA 437
           LLWVAVIGDWLNLVFKWILFGQRPYWWVLDTDYYSNTSVPLIKQFPVTCETGPGSPSGHA
Sbjct: 61  LLWVAVIGDWLNLVFKWILFGQRPYWWVLDTDYYSNTSVPLIKQFPVTCETGPGSPSGHA 120

Query: 438 MGTAGVYYVMVTSALSIIRGKKKPTYGFR 524
           MGTAGVYYVMVTS LSI +GK KPTY FR
Sbjct: 121 MGTAGVYYVMVTSTLSIFQGKIKPTYRFR 149



 Score =  293 bits (750), Expect(2) = e-163
 Identities = 143/165 (86%), Positives = 153/165 (92%)
 Frame = +1

Query: 523  GIAVAETFRHIQSIYNASLKKYFLITFFLFSFAIGFYLLLKGLGVDLSWTLEKAKRRCER 702
            GIAV ETF HI SIYNASLKKYFLITFFLFSFAIGFYLLLKGLGVDL WTLEKA+R CE+
Sbjct: 188  GIAVTETFSHIHSIYNASLKKYFLITFFLFSFAIGFYLLLKGLGVDLLWTLEKAQRWCEQ 247

Query: 703  PEWVHIDTTPFASLLKNVGTLFGLGLALNSSMYRQGCKGKLSKWFPFRLSCIVASLVLLH 882
            PEWVHIDTTPFASLLKN+GTLFGLGLALNSSMYR+ CKGKLSKW PFRLS IVASLVLLH
Sbjct: 248  PEWVHIDTTPFASLLKNLGTLFGLGLALNSSMYRESCKGKLSKWLPFRLSSIVASLVLLH 307

Query: 883  FFDSLKPPSQIELIFYVLSFLQSAAVPLASVSLIPYCLSRALGQP 1017
             FDSLKPPSQ+EL+FYVLSF +SA VPLASVS+IPYCL++ LGQP
Sbjct: 308  VFDSLKPPSQVELVFYVLSFCKSAVVPLASVSVIPYCLAQVLGQP 352


>ref|NP_001075155.1| glucose-6-phosphatase 2 isoform 2 [Homo sapiens].
          Length = 154

 Score =  167 bits (424), Expect = 1e-41
 Identities = 74/132 (56%), Positives = 96/132 (72%)
 Frame = +3

Query: 90  MNLLHNFGIQSTRYLQVNYQDSQDWFILVSVIADLRNAFYVLFPIWFHLQEAVGIKLLWV 269
           M+ LH  G+   ++LQ +Y+    +   +S + D RN F++ FP+ F   + VG K++WV
Sbjct: 1   MDFLHRNGVLIIQHLQKDYRAYYTFLNFMSNVGDPRNIFFIYFPLCFQFNQTVGTKMIWV 60

Query: 270 AVIGDWLNLVFKWILFGQRPYWWVLDTDYYSNTSVPLIKQFPVTCETGPGSPSGHAMGTA 449
           AVIGDWLNL+FKWILFG RPYWWV +T  Y N S P ++QFP TCETGPGSPSGHAMG +
Sbjct: 61  AVIGDWLNLIFKWILFGHRPYWWVQETQIYPNHSSPCLEQFPTTCETGPGSPSGHAMGAS 120

Query: 450 GVYYVMVTSALS 485
            V+YVMVT+ALS
Sbjct: 121 CVWYVMVTAALS 132


>ref|NP_066999.1| glucose-6-phosphatase 2 isoform 1 [Homo sapiens].
          Length = 355

 Score =  167 bits (424), Expect = 1e-41
 Identities = 74/132 (56%), Positives = 96/132 (72%)
 Frame = +3

Query: 90  MNLLHNFGIQSTRYLQVNYQDSQDWFILVSVIADLRNAFYVLFPIWFHLQEAVGIKLLWV 269
           M+ LH  G+   ++LQ +Y+    +   +S + D RN F++ FP+ F   + VG K++WV
Sbjct: 1   MDFLHRNGVLIIQHLQKDYRAYYTFLNFMSNVGDPRNIFFIYFPLCFQFNQTVGTKMIWV 60

Query: 270 AVIGDWLNLVFKWILFGQRPYWWVLDTDYYSNTSVPLIKQFPVTCETGPGSPSGHAMGTA 449
           AVIGDWLNL+FKWILFG RPYWWV +T  Y N S P ++QFP TCETGPGSPSGHAMG +
Sbjct: 61  AVIGDWLNLIFKWILFGHRPYWWVQETQIYPNHSSPCLEQFPTTCETGPGSPSGHAMGAS 120

Query: 450 GVYYVMVTSALS 485
            V+YVMVT+ALS
Sbjct: 121 CVWYVMVTAALS 132



 Score =  162 bits (410), Expect = 5e-40
 Identities = 78/164 (47%), Positives = 106/164 (64%)
 Frame = +1

Query: 523  GIAVAETFRHIQSIYNASLKKYFLITFFLFSFAIGFYLLLKGLGVDLSWTLEKAKRRCER 702
            G+ VAE F H   I  ASL  Y     FLF FA+GFYLLL+ L +DL W++  AK+ C  
Sbjct: 186  GMLVAEAFEHTPGIQTASLGTYLKTNLFLFLFAVGFYLLLRVLNIDLLWSVPIAKKWCAN 245

Query: 703  PEWVHIDTTPFASLLKNVGTLFGLGLALNSSMYRQGCKGKLSKWFPFRLSCIVASLVLLH 882
            P+W+HIDTTPFA L++N+G LFGLG A+NS M+   C+G  +    FRL C + SL +L 
Sbjct: 246  PDWIHIDTTPFAGLVRNLGVLFGLGFAINSEMFLLSCRGGNNYTLSFRLLCALTSLTILQ 305

Query: 883  FFDSLKPPSQIELIFYVLSFLQSAAVPLASVSLIPYCLSRALGQ 1014
             +  L+ P+  E +FYVLSF +SA++PL  V+ IPY +   + Q
Sbjct: 306  LYHFLQIPTHEEHLFYVLSFCKSASIPLTVVAFIPYSVHMLMKQ 349


>ref|NP_612396.1| glucose-6-phosphatase 3 [Homo sapiens].
          Length = 346

 Score =  109 bits (272), Expect = 5e-24
 Identities = 50/125 (40%), Positives = 75/125 (60%)
 Frame = +3

Query: 111 GIQSTRYLQVNYQDSQDWFILVSVIADLRNAFYVLFPIWFHLQEAVGIKLLWVAVIGDWL 290
           GI     LQ      ++ ++ ++ + D +  F   FP  ++    VGI +LW+++I +WL
Sbjct: 8   GIVIAEALQNQLAWLENVWLWITFLGDPKILFLFYFPAAYYASRRVGIAVLWISLITEWL 67

Query: 291 NLVFKWILFGQRPYWWVLDTDYYSNTSVPLIKQFPVTCETGPGSPSGHAMGTAGVYYVMV 470
           NL+FKW LFG RP+WWV ++ YYS      + QFP +CETGPGSPSGH M T    + ++
Sbjct: 68  NLIFKWFLFGDRPFWWVHESGYYSQAPAQ-VHQFPSSCETGPGSPSGHCMITGAALWPIM 126

Query: 471 TSALS 485
           T+  S
Sbjct: 127 TALSS 131



 Score = 92.8 bits (229), Expect = 4e-19
 Identities = 49/122 (40%), Positives = 76/122 (62%)
 Frame = +1

Query: 631 YLLLKGLGVDLSWTLEKAKRRCERPEWVHIDTTPFASLLKNVGTLFGLGLALNSSMYRQG 810
           Y  L  LG+DLSW++  A + CERPEW+H+D+ PFASL ++ G   GLG+AL+S  Y Q 
Sbjct: 214 YWTLFTLGLDLSWSISLAFKWCERPEWIHVDSRPFASLSRDSGAALGLGIALHSPCYAQV 273

Query: 811 CKGKLSKWFPFRLSCIVASLVLLHFFDSLKPPSQIELIFYVLSFLQSAAVPLASVSLIPY 990
            + +L      +++C+V ++ LL   D L  P QI L FY+ +FL+    P   ++L+P+
Sbjct: 274 RRAQLGN--GQKIACLVLAMGLLGPLDWLGHPPQISL-FYIFNFLKYTLWPCLVLALVPW 330

Query: 991 CL 996
            +
Sbjct: 331 AV 332


  Database: RefSeq49_HP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,297,164
  Number of sequences in database:  32,964
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 39,636,488
Number of extensions: 1063431
Number of successful extensions: 3891
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 3887
Number of HSP's successfully gapped: 7
Length of query: 339
Length of database: 18,297,164
Length adjustment: 103
Effective length of query: 236
Effective length of database: 14,901,872
Effective search space: 3516841792
Effective search space used: 3516841792
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)

Search to RefSeqMP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-001912
         (1017 letters)

Database: RefSeq49_MP.fasta 
           30,036 sequences; 15,617,559 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_032087.2| glucose-6-phosphatase [Mus musculus].                298   e-157
Alignment   gi|NP_067306.1| glucose-6-phosphatase 2 [Mus musculus].              171   8e-43
Alignment   gi|NP_787949.2| glucose-6-phosphatase 3 [Mus musculus].              114   9e-26

>ref|NP_032087.2| glucose-6-phosphatase [Mus musculus].
          Length = 357

 Score =  298 bits (763), Expect(2) = e-157
 Identities = 136/149 (91%), Positives = 143/149 (95%)
 Frame = +3

Query: 78  MEEGMNLLHNFGIQSTRYLQVNYQDSQDWFILVSVIADLRNAFYVLFPIWFHLQEAVGIK 257
           MEEGMN+LH+FGIQSTRYLQVNYQDSQDWFILVSVIADLRNAFYVLFPIWFHL+E VGI 
Sbjct: 1   MEEGMNILHDFGIQSTRYLQVNYQDSQDWFILVSVIADLRNAFYVLFPIWFHLKETVGIN 60

Query: 258 LLWVAVIGDWLNLVFKWILFGQRPYWWVLDTDYYSNTSVPLIKQFPVTCETGPGSPSGHA 437
           LLWVAV+GDW NLVFKWILFGQRPYWWVLDTDYYSN+SVP+IKQFPVTCETGPGSPSGHA
Sbjct: 61  LLWVAVVGDWFNLVFKWILFGQRPYWWVLDTDYYSNSSVPIIKQFPVTCETGPGSPSGHA 120

Query: 438 MGTAGVYYVMVTSALSIIRGKKKPTYGFR 524
           MG AGVYYVMVTS L+I RGKKKPTYGFR
Sbjct: 121 MGAAGVYYVMVTSTLAIFRGKKKPTYGFR 149



 Score =  276 bits (705), Expect(2) = e-157
 Identities = 134/164 (81%), Positives = 146/164 (89%)
 Frame = +1

Query: 523  GIAVAETFRHIQSIYNASLKKYFLITFFLFSFAIGFYLLLKGLGVDLSWTLEKAKRRCER 702
            GIAVAETF HI+ IYNASL+KY LIT FLF FA+GFYLLLKGLGVDL WTLEKAKR CER
Sbjct: 188  GIAVAETFSHIRGIYNASLRKYCLITIFLFGFALGFYLLLKGLGVDLLWTLEKAKRWCER 247

Query: 703  PEWVHIDTTPFASLLKNVGTLFGLGLALNSSMYRQGCKGKLSKWFPFRLSCIVASLVLLH 882
            PEWVH+DTTPFASL KN+GTL GLGLALNSSMYR+ CKG+LSK  PFR +CIVASLVLLH
Sbjct: 248  PEWVHLDTTPFASLFKNLGTLLGLGLALNSSMYRKSCKGELSKLLPFRFACIVASLVLLH 307

Query: 883  FFDSLKPPSQIELIFYVLSFLQSAAVPLASVSLIPYCLSRALGQ 1014
             FDSLKPPSQ+ELIFY+LSF +SA VP ASVSLIPYCL+R LGQ
Sbjct: 308  LFDSLKPPSQVELIFYILSFCKSATVPFASVSLIPYCLARILGQ 351


>ref|NP_067306.1| glucose-6-phosphatase 2 [Mus musculus].
          Length = 355

 Score =  171 bits (433), Expect = 8e-43
 Identities = 74/132 (56%), Positives = 97/132 (73%)
 Frame = +3

Query: 90  MNLLHNFGIQSTRYLQVNYQDSQDWFILVSVIADLRNAFYVLFPIWFHLQEAVGIKLLWV 269
           M+ LH  G+    +LQ +Y+    +   +S + D RN F + FP+WF L + VG K++WV
Sbjct: 1   MDFLHRSGVLIIHHLQEDYRTYYGFLNFMSNVGDPRNIFSIYFPLWFQLNQNVGTKMIWV 60

Query: 270 AVIGDWLNLVFKWILFGQRPYWWVLDTDYYSNTSVPLIKQFPVTCETGPGSPSGHAMGTA 449
           AVIGDW NL+FKWILFG RPYWW+ +T+ Y N S P ++QFP TCETGPGSPSGHAMG++
Sbjct: 61  AVIGDWFNLIFKWILFGHRPYWWIQETEIYPNHSSPCLEQFPTTCETGPGSPSGHAMGSS 120

Query: 450 GVYYVMVTSALS 485
            V+YVMVT+ALS
Sbjct: 121 CVWYVMVTAALS 132



 Score =  163 bits (412), Expect = 2e-40
 Identities = 75/158 (47%), Positives = 107/158 (67%)
 Frame = +1

Query: 523 GIAVAETFRHIQSIYNASLKKYFLITFFLFSFAIGFYLLLKGLGVDLSWTLEKAKRRCER 702
           G+ VAE F H   ++ ASL  Y     FLF FA+GFYLLL+  G+DL W++  AK+ C  
Sbjct: 186 GMLVAEAFEHTPGVHMASLSVYLKTNVFLFLFALGFYLLLRLFGIDLLWSVPIAKKWCAN 245

Query: 703 PEWVHIDTTPFASLLKNVGTLFGLGLALNSSMYRQGCKGKLSKWFPFRLSCIVASLVLLH 882
           P+W+HID+TPFA L++N+G LFGLG A+NS M+ + C+G+      FRL C + SL  + 
Sbjct: 246 PDWIHIDSTPFAGLVRNLGVLFGLGFAINSEMFLRSCQGENGTKPSFRLLCALTSLTTMQ 305

Query: 883 FFDSLKPPSQIELIFYVLSFLQSAAVPLASVSLIPYCL 996
            +  +K P+  E +FY+LSF +SA++PL  V+LIPYC+
Sbjct: 306 LYRFIKIPTHAEPLFYLLSFCKSASIPLMVVALIPYCV 343


>ref|NP_787949.2| glucose-6-phosphatase 3 [Mus musculus].
          Length = 346

 Score =  114 bits (286), Expect = 9e-26
 Identities = 54/146 (36%), Positives = 83/146 (56%), Gaps = 5/146 (3%)
 Frame = +3

Query: 111 GIQSTRYLQVNYQDSQDWFILVSVIADLRNAFYVLFPIWFHLQEAVGIKLLWVAVIGDWL 290
           GI     LQ      ++ ++ V+ + D +N F   FP  ++    +GI +LW+  I +WL
Sbjct: 8   GIIMAEALQNRLPGLENMWLWVTFLGDPKNLFQFCFPAAYYASRRLGISVLWITFIAEWL 67

Query: 291 NLVFKWILFGQRPYWWVLDTDYYSNTSVPLIKQFPVTCETGPGSPSGHAMGTAGVYYVMV 470
           NLVFKW LFG RP+WWV ++ Y + T +  I QFP +CETGPGSPSGH M T    + ++
Sbjct: 68  NLVFKWFLFGDRPFWWVHESGYSTQTPIQ-IHQFPSSCETGPGSPSGHCMITGAALWPVM 126

Query: 471 TSALSIIRGKKKPTY-----GFRHCS 533
           T+  S +  + +  +     G  +C+
Sbjct: 127 TAISSQVASRSRSPWVRVIPGLAYCT 152



 Score = 93.2 bits (230), Expect = 3e-19
 Identities = 54/138 (39%), Positives = 80/138 (57%)
 Frame = +1

Query: 577 LKKYFLITFFLFSFAIGFYLLLKGLGVDLSWTLEKAKRRCERPEWVHIDTTPFASLLKNV 756
           L  Y L    L   A   Y  L  LG+DLSW++  A + CERPEWVH+D+ PFASL ++ 
Sbjct: 196 LSFYGLTALALMLGASLMYWTLFTLGLDLSWSINLASKWCERPEWVHMDSRPFASLSRDS 255

Query: 757 GTLFGLGLALNSSMYRQGCKGKLSKWFPFRLSCIVASLVLLHFFDSLKPPSQIELIFYVL 936
           G+  GLG+AL++  Y Q  +  L      +++C V ++ LL F + L  P QI L FY+ 
Sbjct: 256 GSALGLGIALHTPCYAQIRRAHLGN--GQKIACFVLAMGLLVFLEWLGYPPQISL-FYIF 312

Query: 937 SFLQSAAVPLASVSLIPY 990
           +FL+    P   ++L+P+
Sbjct: 313 NFLKYTLWPCLVLALVPW 330


  Database: RefSeq49_MP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 15,617,559
  Number of sequences in database:  30,036
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 33,568,174
Number of extensions: 888265
Number of successful extensions: 2910
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 2905
Number of HSP's successfully gapped: 6
Length of query: 339
Length of database: 15,617,559
Length adjustment: 102
Effective length of query: 237
Effective length of database: 12,553,887
Effective search space: 2975271219
Effective search space used: 2975271219
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)

Search to RefSeqSP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-001912
         (1017 letters)

Database: RefSeq49_SP.fasta 
           24,897 sequences; 11,343,932 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001106916.1| glucose-6-phosphatase [Sus scrofa].               328   e-177
Alignment   gi|XP_003133509.2| PREDICTED: glucose-6-phosphatase 2-like [Sus...   169   2e-42
Alignment   gi|XP_003131402.1| PREDICTED: glucose-6-phosphatase 3-like [Sus...   112   3e-25

>ref|NP_001106916.1| glucose-6-phosphatase [Sus scrofa].
          Length = 357

 Score =  328 bits (842), Expect(2) = e-177
 Identities = 163/165 (98%), Positives = 164/165 (99%)
 Frame = +1

Query: 523  GIAVAETFRHIQSIYNASLKKYFLITFFLFSFAIGFYLLLKGLGVDLSWTLEKAKRRCER 702
            GIAVAETFRHIQSIYNASLKKYFLITFFLFSFAIGFYLLLKGLGVDLSWTLEKAKRRCER
Sbjct: 188  GIAVAETFRHIQSIYNASLKKYFLITFFLFSFAIGFYLLLKGLGVDLSWTLEKAKRRCER 247

Query: 703  PEWVHIDTTPFASLLKNVGTLFGLGLALNSSMYRQGCKGKLSKWFPFRLSCIVASLVLLH 882
            PEWVHIDTTPFASLLKNVGTLFGLGLALNSSMYRQGCKGKLSKWFPFRLSCIVASLVLLH
Sbjct: 248  PEWVHIDTTPFASLLKNVGTLFGLGLALNSSMYRQGCKGKLSKWFPFRLSCIVASLVLLH 307

Query: 883  FFDSLKPPSQIELIFYVLSFLQSAAVPLASVSLIPYCLSRALGQP 1017
            FFDSLKPPSQIELIFYVLSF +SAAVPLASVSLIPYCLSRALGQP
Sbjct: 308  FFDSLKPPSQIELIFYVLSFCKSAAVPLASVSLIPYCLSRALGQP 352



 Score =  312 bits (799), Expect(2) = e-177
 Identities = 148/149 (99%), Positives = 148/149 (99%)
 Frame = +3

Query: 78  MEEGMNLLHNFGIQSTRYLQVNYQDSQDWFILVSVIADLRNAFYVLFPIWFHLQEAVGIK 257
           MEEGMNLLHNFGIQSTRYLQVNYQDSQDWFILVSVIADLRNAFYVLFPIWFHLQEAVGIK
Sbjct: 1   MEEGMNLLHNFGIQSTRYLQVNYQDSQDWFILVSVIADLRNAFYVLFPIWFHLQEAVGIK 60

Query: 258 LLWVAVIGDWLNLVFKWILFGQRPYWWVLDTDYYSNTSVPLIKQFPVTCETGPGSPSGHA 437
           LLWVAVIGDWLNLVFKWILFGQRPYWWVLDTDYYSNTSVPLIKQFPVTCETGPGSPSG A
Sbjct: 61  LLWVAVIGDWLNLVFKWILFGQRPYWWVLDTDYYSNTSVPLIKQFPVTCETGPGSPSGLA 120

Query: 438 MGTAGVYYVMVTSALSIIRGKKKPTYGFR 524
           MGTAGVYYVMVTSALSIIRGKKKPTYGFR
Sbjct: 121 MGTAGVYYVMVTSALSIIRGKKKPTYGFR 149


>ref|XP_003133509.2| PREDICTED: glucose-6-phosphatase 2-like [Sus scrofa].
          Length = 154

 Score =  169 bits (429), Expect = 2e-42
 Identities = 74/131 (56%), Positives = 96/131 (73%)
 Frame = +3

Query: 90  MNLLHNFGIQSTRYLQVNYQDSQDWFILVSVIADLRNAFYVLFPIWFHLQEAVGIKLLWV 269
           M+ LH  G+   ++LQ +Y+    +   +S + D RN F + FP+WF L + VG K++WV
Sbjct: 1   MDFLHRNGVLLIQHLQKDYRAYYSFLNFMSNVGDPRNIFSIYFPLWFQLNQRVGTKMIWV 60

Query: 270 AVIGDWLNLVFKWILFGQRPYWWVLDTDYYSNTSVPLIKQFPVTCETGPGSPSGHAMGTA 449
           AVIGDW NL+FKWILFG RPYWWV +T  Y N S P ++QFP TCETGPGSPSGHAMG++
Sbjct: 61  AVIGDWFNLIFKWILFGHRPYWWVQETQIYPNHSSPCLEQFPTTCETGPGSPSGHAMGSS 120

Query: 450 GVYYVMVTSAL 482
            V+YVMVT+AL
Sbjct: 121 CVWYVMVTAAL 131


>ref|XP_003131402.1| PREDICTED: glucose-6-phosphatase 3-like [Sus scrofa].
          Length = 346

 Score =  112 bits (280), Expect = 3e-25
 Identities = 52/125 (41%), Positives = 76/125 (60%)
 Frame = +3

Query: 111 GIQSTRYLQVNYQDSQDWFILVSVIADLRNAFYVLFPIWFHLQEAVGIKLLWVAVIGDWL 290
           GI     LQ      ++ ++ V+ + D ++ F   FP  ++    VGI +LW+++I +WL
Sbjct: 8   GIAMAEALQNQLPWLENVWLWVTFLGDPKSLFLFYFPAAYYASRRVGIAVLWISLITEWL 67

Query: 291 NLVFKWILFGQRPYWWVLDTDYYSNTSVPLIKQFPVTCETGPGSPSGHAMGTAGVYYVMV 470
           NLVFKW LFG RP+WWV ++ YYS      + QFP +CETGPGSPSGH M T    + ++
Sbjct: 68  NLVFKWFLFGDRPFWWVHESGYYSQAPAQ-VHQFPSSCETGPGSPSGHCMITGAALWPIM 126

Query: 471 TSALS 485
           T+  S
Sbjct: 127 TAISS 131



 Score = 95.9 bits (237), Expect = 3e-20
 Identities = 56/138 (40%), Positives = 81/138 (58%)
 Frame = +1

Query: 577 LKKYFLITFFLFSFAIGFYLLLKGLGVDLSWTLEKAKRRCERPEWVHIDTTPFASLLKNV 756
           L  Y L +  L   A   Y  L  LG+DLSW++  A + CERPEWVH+D+ PFASL ++ 
Sbjct: 196 LSFYGLTSLALLLGASLIYWTLFTLGLDLSWSISLASKWCERPEWVHLDSRPFASLSRDS 255

Query: 757 GTLFGLGLALNSSMYRQGCKGKLSKWFPFRLSCIVASLVLLHFFDSLKPPSQIELIFYVL 936
           G   GLG+AL+S  Y Q  +  L   +  +L+C+V ++ LL   D L  P QI L FY+ 
Sbjct: 256 GAALGLGIALHSPCYAQVRRAHLG--YGQKLACLVLAMGLLGPLDWLGYPPQISL-FYIF 312

Query: 937 SFLQSAAVPLASVSLIPY 990
           +FL+    P   ++L+P+
Sbjct: 313 NFLKYTLWPCLVLALVPW 330


  Database: RefSeq49_SP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 11,343,932
  Number of sequences in database:  24,897
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 24,951,420
Number of extensions: 676732
Number of successful extensions: 2308
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 2306
Number of HSP's successfully gapped: 5
Length of query: 339
Length of database: 11,343,932
Length adjustment: 100
Effective length of query: 239
Effective length of database: 8,854,232
Effective search space: 2116161448
Effective search space used: 2116161448
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)

Search to Sscrofa10_2

BLASTN 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-001912
         (1017 letters)

Database: Sscrofa_10.2.fasta 
           4582 sequences; 2,808,509,378 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|GL894545.1| Sus scrofa unplaced genomic scaffold chrU_scaffold32   218   5e-54
gb|GL892101.1| Sus scrofa unplaced genomic scaffold chrU_scaffold10   192   3e-46

>gb|GL894545.1| Sus scrofa unplaced genomic scaffold chrU_scaffold32
          Length = 110

 Score =  218 bits (110), Expect = 5e-54
 Identities = 110/110 (100%)
 Strand = Plus / Minus

                                                                       
Query: 80  ggaggagggaatgaaccttctccataactttgggatccaatcaacgcgctacctccaggt 139
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110 ggaggagggaatgaaccttctccataactttgggatccaatcaacgcgctacctccaggt 51

                                                             
Query: 140 gaattaccaggactcccaggattggttcatcttggtatctgtgatcgcgg 189
           ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 50  gaattaccaggactcccaggattggttcatcttggtatctgtgatcgcgg 1


>gb|GL892101.1| Sus scrofa unplaced genomic scaffold chrU_scaffold10
          Length = 101

 Score =  192 bits (97), Expect = 3e-46
 Identities = 97/97 (100%)
 Strand = Plus / Minus

                                                                       
Query: 523 ggcattgcagttgctgagactttccgccacattcagagtatctacaacgccagcctcaag 582
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97  ggcattgcagttgctgagactttccgccacattcagagtatctacaacgccagcctcaag 38

                                                
Query: 583 aagtattttctcattaccttcttcctgttcagttttg 619
           |||||||||||||||||||||||||||||||||||||
Sbjct: 37  aagtattttctcattaccttcttcctgttcagttttg 1


  Database: Sscrofa_10.2.fasta
    Posted date:  Nov 16, 2011 10:34 AM
  Number of letters in database: 2,808,509,378
  Number of sequences in database:  4582
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 29,190,086
Number of extensions: 242
Number of successful extensions: 242
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 242
Number of HSP's successfully gapped: 2
Length of query: 1017
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 996
Effective length of database: 2,808,413,156
Effective search space: 2797179503376
Effective search space used: 2797179503376
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 29 (58.0 bits)