Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-001977
(1058 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001039642.1| leucine-rich alpha-2-glycoprotein [Bos tauru... 399 e-111
Alignment gi|NP_001094702.1| carboxypeptidase N subunit 2 [Bos taurus]. 132 4e-31
Alignment gi|NP_001069431.1| insulin-like growth factor-binding protein c... 108 1e-23
Alignment gi|XP_002684904.1| PREDICTED: glycoprotein V (platelet) [Bos ta... 107 1e-23
Alignment gi|XP_002691418.1| PREDICTED: leucine rich repeat transmembrane... 106 3e-23
Alignment gi|XP_876920.3| PREDICTED: leucine rich repeat transmembrane ne... 106 3e-23
Alignment gi|NP_001096753.1| leucine-rich repeat transmembrane neuronal p... 99 5e-21
Alignment gi|XP_002693760.1| PREDICTED: reticulon 4 receptor-like 2-like ... 99 5e-21
Alignment gi|XP_607470.4| PREDICTED: reticulon 4 receptor-like 2-like [Bo... 99 5e-21
Alignment gi|NP_001192520.1| leucine-rich repeats and immunoglobulin-like... 97 2e-20
>ref|NP_001039642.1| leucine-rich alpha-2-glycoprotein [Bos taurus].
Length = 346
Score = 399 bits (1025), Expect = e-111
Identities = 202/258 (78%), Positives = 222/258 (86%)
Frame = +2
Query: 59 EGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLK 238
+G+PNLQELHLS+N+LED S KFLLPVPQLKVLDLTRN+L L PG F+VSAAL TLVLK
Sbjct: 88 QGVPNLQELHLSSNRLEDFSPKFLLPVPQLKVLDLTRNSLTGLFPGFFRVSAALCTLVLK 147
Query: 239 ENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLL 418
N+L L+ASWL GLKALRHLDLS NQL +LP LL NFTDL LDL NNQLQTLPPDLL
Sbjct: 148 GNQLKFLEASWLHGLKALRHLDLSENQLHSLPPGLLENFTDLLTLDLSNNQLQTLPPDLL 207
Query: 419 RGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLS 598
RGPL LE LHLEGNRLQVL EG LAPQPKLRYLFLN+N+L ++AAGAFRGLQ LDMLDLS
Sbjct: 208 RGPLNLERLHLEGNRLQVLGEGLLAPQPKLRYLFLNDNRLASVAAGAFRGLQKLDMLDLS 267
Query: 599 NNSLTSVPEGLWASLGKAAGNMKVGFDISGNPWICDQKLDDLYRWLVANEDKMFFQNNTH 778
NN LT+VP GLW SLGKAA N+K GFDIS NPWICDQ L DLYRWLVANE+KMFF+N+T
Sbjct: 268 NNLLTTVPTGLWTSLGKAARNLKDGFDISNNPWICDQNLADLYRWLVANENKMFFRNHTR 327
Query: 779 CAGPKALEGQTLLAVAAS 832
CAGP+AL+GQTLLA A S
Sbjct: 328 CAGPEALKGQTLLAAAES 345
Score = 74.7 bits (182), Expect = 1e-13
Identities = 59/177 (33%), Positives = 85/177 (48%), Gaps = 4/177 (2%)
Frame = +2
Query: 113 LSAKFLLPVPQ--LKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLDI--LDASWLRG 280
+SA+ L P P+ L + +++ PP S T+ L ++ L A +L+G
Sbjct: 30 VSAQGLTPNPEACLVFSSVNGSSISCQPPAQIPHSLPADTIFLAVEFFNLTQLPADFLQG 89
Query: 281 LKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGN 460
+ L+ L LS N+L K L L +LDL N L L P R L L L+GN
Sbjct: 90 VPNLQELHLSSNRLEDFSPKFLLPVPQLKVLDLTRNSLTGLFPGFFRVSAALCTLVLKGN 149
Query: 461 RLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGL 631
+L+ LE +L LR+L L+ N+L +L G L LDLSNN L ++P L
Sbjct: 150 QLKFLEASWLHGLKALRHLDLSENQLHSLPPGLLENFTDLLTLDLSNNQLQTLPPDL 206
>ref|NP_001094702.1| carboxypeptidase N subunit 2 [Bos taurus].
Length = 548
Score = 132 bits (333), Expect = 4e-31
Identities = 91/260 (35%), Positives = 124/260 (47%)
Frame = +2
Query: 44 PRRKTEGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALH 223
P + LQ L LSNNQL L + L+ L L N++ LPP +F + L
Sbjct: 185 PEELFHPLGRLQTLRLSNNQLASLPRGLFSRLGSLQELFLDGNSISELPPEVFAQLSCLE 244
Query: 224 TLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTL 403
L L+ N + L S L L L L GN L+TLP L L L L +NQL+T+
Sbjct: 245 KLWLQHNAIGHLPGSVFSALPNLTFLSLQGNALQTLPAGLFTQSPGLVSLSLSHNQLETV 304
Query: 404 PPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLD 583
P L L L N L L G L L+L++N LT L F+ L L+
Sbjct: 305 PEAAFANLTSLGSLMLSHNALTHLPAGVFRGLKGLVKLYLSSNNLTVLHPALFQNLSKLE 364
Query: 584 MLDLSNNSLTSVPEGLWASLGKAAGNMKVGFDISGNPWICDQKLDDLYRWLVANEDKMFF 763
+L LS N LT++PEG++ + + + GNPW CD L L+ WL D++ F
Sbjct: 365 LLSLSRNLLTTLPEGIFDT-----NDNLFNLALYGNPWQCDCHLAYLFSWLYQYSDRL-F 418
Query: 764 QNNTHCAGPKALEGQTLLAV 823
T+CAGP L+GQ + A+
Sbjct: 419 NIQTYCAGPAYLKGQVVPAL 438
Score = 70.5 bits (171), Expect = 2e-12
Identities = 54/165 (32%), Positives = 70/165 (42%)
Frame = +2
Query: 200 FKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDL 379
F S L +V R+ GL L+ L+++G + +N L L
Sbjct: 69 FSSSPNLTKVVFLNTRVCHFRPDAFGGLPGLQDLEITGGNFSNFSADIFSNLISLSKFTL 128
Query: 380 GNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGA 559
N L+ LP L + LE L L+GNRLQ L + P L+ L L N L L
Sbjct: 129 NFNMLEALPEGLFQHMDGLESLQLQGNRLQTLPQRLFQPLRCLKTLNLAQNLLAYLPEEL 188
Query: 560 FRGLQVLDMLDLSNNSLTSVPEGLWASLGKAAGNMKVGFDISGNP 694
F L L L LSNN L S+P GL++ LG G IS P
Sbjct: 189 FHPLGRLQTLRLSNNQLASLPRGLFSRLGSLQELFLDGNSISELP 233
>ref|NP_001069431.1| insulin-like growth factor-binding protein complex acid labile
subunit [Bos taurus].
Length = 611
Score = 108 bits (269), Expect = 1e-23
Identities = 94/289 (32%), Positives = 129/289 (44%), Gaps = 25/289 (8%)
Frame = +2
Query: 23 GHHVLLE-PRRKTEGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGL 199
GH+ L + P G+ L+ L L++NQL++L L + L VL+L+ N L+ LP
Sbjct: 327 GHNRLRQLPEEAFAGLGQLEVLALNDNQLQELRPGGFLGLRNLAVLNLSSNCLRDLPERA 386
Query: 200 FKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDL 379
F+ A LH+L L+ L L GL LR L L GN + + + L +L LDL
Sbjct: 387 FQGLAKLHSLHLEGGCLARLGPLAFAGLSGLRRLFLKGNSIADVDERSLGGLAELLELDL 446
Query: 380 GNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGA 559
NQL LP L + +LE+L L NRL L L P + +L +++N+L L A A
Sbjct: 447 TANQLTHLPGRLFQDLGRLEYLLLARNRLSALPADALGPLQRTFWLDVSHNRLEALPAAA 506
Query: 560 FRGLQVLDMLDLSNNSL-TSVP-----EGLWASLGKAAGNMKVGFDISGNPWICDQKLDD 721
L L L L NNSL T P E LW + GNPW C L
Sbjct: 507 LAPLSRLRFLSLRNNSLRTFAPQPPGLERLW---------------LEGNPWDCSCALGA 551
Query: 722 LYRWLV---------------ANEDK---MFFQNNTHCAGPKALEGQTL 814
L + + N+D+ + NN CA P +L G L
Sbjct: 552 LRAFALQQPASVPRFVQALAEGNDDRQPPVLAYNNITCASPPSLAGLDL 600
Score = 102 bits (254), Expect = 6e-22
Identities = 71/202 (35%), Positives = 102/202 (50%)
Frame = +2
Query: 44 PRRKTEGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALH 223
P +G+ L+EL L+ N+L L + +L+ LDL+RN L+ + +F L
Sbjct: 191 PDTAFQGLAGLRELVLAGNKLAYLQPALFCGLGELRELDLSRNTLRSVKANVFVKLPKLQ 250
Query: 224 TLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTL 403
L L N + + G+KALR LDLS N++ +L LH+L L +N L L
Sbjct: 251 KLYLDHNLVAAVAPGAFLGMKALRWLDLSHNRVGSLLEDSFPGLLGLHVLRLSHNALAGL 310
Query: 404 PPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLD 583
P + LE L L NRL+ L E A +L L LN+N+L L G F GL+ L
Sbjct: 311 RPRTFKDLHFLEELQLGHNRLRQLPEEAFAGLGQLEVLALNDNQLQELRPGGFLGLRNLA 370
Query: 584 MLDLSNNSLTSVPEGLWASLGK 649
+L+LS+N L +PE + L K
Sbjct: 371 VLNLSSNCLRDLPERAFQGLAK 392
Score = 97.4 bits (241), Expect = 2e-20
Identities = 69/194 (35%), Positives = 103/194 (53%)
Frame = +2
Query: 38 LEPRRKTEGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAA 217
LEP+ G+ L LHL +N+L L+A L P L L L+ N L RL GLF+ A
Sbjct: 118 LEPQALL-GLRGLCHLHLEHNRLHALAAHTFLHTPGLASLGLSNNLLSRLDEGLFRGLAH 176
Query: 218 LHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQ 397
L L L N L +L + +GL LR L L+GN+L L L +L LDL N L+
Sbjct: 177 LWDLNLGWNSLTVLPDTAFQGLAGLRELVLAGNKLAYLQPALFCGLGELRELDLSRNTLR 236
Query: 398 TLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQV 577
++ ++ KL+ L+L+ N + + G LR+L L++N++ +L +F GL
Sbjct: 237 SVKANVFVKLPKLQKLYLDHNLVAAVAPGAFLGMKALRWLDLSHNRVGSLLEDSFPGLLG 296
Query: 578 LDMLDLSNNSLTSV 619
L +L LS+N+L +
Sbjct: 297 LHVLRLSHNALAGL 310
Score = 86.7 bits (213), Expect = 3e-17
Identities = 72/198 (36%), Positives = 94/198 (47%), Gaps = 4/198 (2%)
Frame = +2
Query: 62 GIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKE 241
G+ L+EL LS N L + A + +P+L+ L L N + + PG F AL L L
Sbjct: 221 GLGELRELDLSRNTLRSVKANVFVKLPKLQKLYLDHNLVAAVAPGAFLGMKALRWLDLSH 280
Query: 242 NRLDILDASWLRGLKALRHLDLSGNQLRTL-PRKLLANFTDLHILD---LGNNQLQTLPP 409
NR+ L GL L L LS N L L PR F DLH L+ LG+N+L+ LP
Sbjct: 281 NRVGSLLEDSFPGLLGLHVLRLSHNALAGLRPR----TFKDLHFLEELQLGHNRLRQLPE 336
Query: 410 DLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDML 589
+ G +LE L L N+LQ L G L L L++N L L AF+GL L L
Sbjct: 337 EAFAGLGQLEVLALNDNQLQELRPGGFLGLRNLAVLNLSSNCLRDLPERAFQGLAKLHSL 396
Query: 590 DLSNNSLTSVPEGLWASL 643
L L + +A L
Sbjct: 397 HLEGGCLARLGPLAFAGL 414
Score = 86.3 bits (212), Expect = 4e-17
Identities = 71/196 (36%), Positives = 93/196 (47%)
Frame = +2
Query: 62 GIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKE 241
G+ L+ L LS+N++ L + L VL L+ NAL L P FK L L L
Sbjct: 269 GMKALRWLDLSHNRVGSLLEDSFPGLLGLHVLRLSHNALAGLRPRTFKDLHFLEELQLGH 328
Query: 242 NRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLR 421
NRL L GL L L L+ NQL+ L +L +L+L +N L+ LP +
Sbjct: 329 NRLRQLPEEAFAGLGQLEVLALNDNQLQELRPGGFLGLRNLAVLNLSSNCLRDLPERAFQ 388
Query: 422 GPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSN 601
G KL LHLEG L L A LR LFL N + + + GL L LDL+
Sbjct: 389 GLAKLHSLHLEGGCLARLGPLAFAGLSGLRRLFLKGNSIADVDERSLGGLAELLELDLTA 448
Query: 602 NSLTSVPEGLWASLGK 649
N LT +P L+ LG+
Sbjct: 449 NQLTHLPGRLFQDLGR 464
Score = 72.8 bits (177), Expect = 5e-13
Identities = 60/170 (35%), Positives = 75/170 (44%)
Frame = +2
Query: 140 PQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQ 319
P + L L N +P F+ + L L L+ + L L+ L GL+ L HL L N+
Sbjct: 79 PGTRALWLDGNNFSSIPAAAFRNLSGLGFLNLQGSGLASLEPQALLGLRGLCHLHLEHNR 138
Query: 320 LRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQ 499
L L + L L L NN L L L RG L L+L N L VL +
Sbjct: 139 LHALAAHTFLHTPGLASLGLSNNLLSRLDEGLFRGLAHLWDLNLGWNSLTVLPDTAFQGL 198
Query: 500 PKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASLGK 649
LR L L NKL L F GL L LDLS N+L SV ++ L K
Sbjct: 199 AGLRELVLAGNKLAYLQPALFCGLGELRELDLSRNTLRSVKANVFVKLPK 248
Score = 55.8 bits (133), Expect = 6e-08
Identities = 49/147 (33%), Positives = 61/147 (41%)
Frame = +2
Query: 20 RGHHVLLEPRRKTEGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGL 199
+G+ + R G+ L EL L+ NQ L LP L
Sbjct: 423 KGNSIADVDERSLGGLAELLELDLTANQ------------------------LTHLPGRL 458
Query: 200 FKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDL 379
F+ L L+L NRL L A L L+ LD+S N+L LP LA + L L L
Sbjct: 459 FQDLGRLEYLLLARNRLSALPADALGPLQRTFWLDVSHNRLEALPAAALAPLSRLRFLSL 518
Query: 380 GNNQLQTLPPDLLRGPLKLEWLHLEGN 460
NN L+T P P LE L LEGN
Sbjct: 519 RNNSLRTFAPQ----PPGLERLWLEGN 541
>ref|XP_002684904.1| PREDICTED: glycoprotein V (platelet) [Bos taurus].
Length = 583
Score = 107 bits (268), Expect = 1e-23
Identities = 81/253 (32%), Positives = 114/253 (45%), Gaps = 1/253 (0%)
Frame = +2
Query: 74 LQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLD 253
L EL L N L + + L L L+ N L+ LP LF S L L L EN L+
Sbjct: 220 LTELQLHTNHLRSIVPGAFDRLRSLSSLTLSENRLEFLPSALFLHSHNLTFLTLSENPLE 279
Query: 254 ILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLG-NNQLQTLPPDLLRGPL 430
L + LR L L QLRTLP N T L +L++ + +L LP D RG
Sbjct: 280 ELPKVLFGEIGGLRELRLKSTQLRTLPAAAFRNLTGLRVLEVSLSPRLSALPEDAFRGLG 339
Query: 431 KLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSL 610
+L+ L L L L G L +LR++ L +N+L L + FR L L+ + L +N L
Sbjct: 340 ELQVLALSSTGLASLPAGLLRGLCRLRHVSLRSNRLRALPSALFRNLSSLEEVQLDHNQL 399
Query: 611 TSVPEGLWASLGKAAGNMKVGFDISGNPWICDQKLDDLYRWLVANEDKMFFQNNTHCAGP 790
++P + +L + AG + + NPW CD L WL + + C GP
Sbjct: 400 ETLPGDAFEALPRLAGVL-----LGHNPWRCDCGLGPFLAWLRRHAGLVGRAEPPRCHGP 454
Query: 791 KALEGQTLLAVAA 829
G+ L + A
Sbjct: 455 GPHAGRLLWTLQA 467
Score = 102 bits (253), Expect = 7e-22
Identities = 73/194 (37%), Positives = 100/194 (51%), Gaps = 1/194 (0%)
Frame = +2
Query: 71 NLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRL 250
+LQEL L+ NQL L A + LK+LDL+ N L LP GLF V L L+L NRL
Sbjct: 147 HLQELFLNQNQLAFLPASLFTHLGNLKLLDLSGNNLTHLPEGLFGVQVKLQKLLLHSNRL 206
Query: 251 DILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPL 430
L++ L L+AL L L N LR++ L L L N+L+ LP L
Sbjct: 207 ASLESGLLDSLRALTELQLHTNHLRSIVPGAFDRLRSLSSLTLSENRLEFLPSALFLHSH 266
Query: 431 KLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLS-NNS 607
L +L L N L+ L + LR L L + +L TL A AFR L L +L++S +
Sbjct: 267 NLTFLTLSENPLEELPKVLFGEIGGLRELRLKSTQLRTLPAAAFRNLTGLRVLEVSLSPR 326
Query: 608 LTSVPEGLWASLGK 649
L+++PE + LG+
Sbjct: 327 LSALPEDAFRGLGE 340
Score = 94.7 bits (234), Expect = 1e-19
Identities = 68/187 (36%), Positives = 91/187 (48%)
Frame = +2
Query: 74 LQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLD 253
LQ L LS++ + ++ +LK L L+RN + LP L L L L N L
Sbjct: 76 LQRLLLSDSHVSAIAPGTFNDPIKLKTLRLSRNKITHLPSALLDNLVLLEQLFLDGNELK 135
Query: 254 ILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLK 433
LD + + L L+ L L+ NQL LP L + +L +LDL N L LP L +K
Sbjct: 136 SLDQNLFQKLVHLQELFLNQNQLAFLPASLFTHLGNLKLLDLSGNNLTHLPEGLFGVQVK 195
Query: 434 LEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLT 613
L+ L L NRL LE G L L L L+ N L ++ GAF L+ L L LS N L
Sbjct: 196 LQKLLLHSNRLASLESGLLDSLRALTELQLHTNHLRSIVPGAFDRLRSLSSLTLSENRLE 255
Query: 614 SVPEGLW 634
+P L+
Sbjct: 256 FLPSALF 262
Score = 86.7 bits (213), Expect = 3e-17
Identities = 62/185 (33%), Positives = 87/185 (47%)
Frame = +2
Query: 89 LSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDAS 268
L NN D++ L+ L L+ + + + PG F L TL L N++ L ++
Sbjct: 65 LQNNSFSDMTV--------LQRLLLSDSHVSAIAPGTFNDPIKLKTLRLSRNKITHLPSA 116
Query: 269 WLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLH 448
L L L L L GN+L++L + L L L L NQL LP L L+ L
Sbjct: 117 LLDNLVLLEQLFLDGNELKSLDQNLFQKLVHLQELFLNQNQLAFLPASLFTHLGNLKLLD 176
Query: 449 LEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEG 628
L GN L L EG Q KL+ L L++N+L +L +G L+ L L L N L S+ G
Sbjct: 177 LSGNNLTHLPEGLFGVQVKLQKLLLHSNRLASLESGLLDSLRALTELQLHTNHLRSIVPG 236
Query: 629 LWASL 643
+ L
Sbjct: 237 AFDRL 241
Score = 80.5 bits (197), Expect = 2e-15
Identities = 66/191 (34%), Positives = 88/191 (46%)
Frame = +2
Query: 74 LQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLD 253
L+ L LS N++ L + L + L+ L L N LK L LF+ L L L +N+L
Sbjct: 100 LKTLRLSRNKITHLPSALLDNLVLLEQLFLDGNELKSLDQNLFQKLVHLQELFLNQNQLA 159
Query: 254 ILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLK 433
L AS L L+ LDLSGN L LP L L L L +N+L +L LL
Sbjct: 160 FLPASLFTHLGNLKLLDLSGNNLTHLPEGLFGVQVKLQKLLLHSNRLASLESGLLDSLRA 219
Query: 434 LEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLT 613
L L L N L+ + G L L L+ N+L L + F L L LS N L
Sbjct: 220 LTELQLHTNHLRSIVPGAFDRLRSLSSLTLSENRLEFLPSALFLHSHNLTFLTLSENPLE 279
Query: 614 SVPEGLWASLG 646
+P+ L+ +G
Sbjct: 280 ELPKVLFGEIG 290
Score = 71.2 bits (173), Expect = 1e-12
Identities = 46/117 (39%), Positives = 61/117 (52%), Gaps = 1/117 (0%)
Frame = +2
Query: 65 IPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNA-LKRLPPGLFKVSAALHTLVLKE 241
I L+EL L + QL L A + L+VL+++ + L LP F+ L L L
Sbjct: 289 IGGLRELRLKSTQLRTLPAAAFRNLTGLRVLEVSLSPRLSALPEDAFRGLGELQVLALSS 348
Query: 242 NRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPD 412
L L A LRGL LRH+ L N+LR LP L N + L + L +NQL+TLP D
Sbjct: 349 TGLASLPAGLLRGLCRLRHVSLRSNRLRALPSALFRNLSSLEEVQLDHNQLETLPGD 405
Score = 65.1 bits (157), Expect = 1e-10
Identities = 52/155 (33%), Positives = 70/155 (45%), Gaps = 1/155 (0%)
Frame = +2
Query: 71 NLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTL-VLKENR 247
NL L LS N LE+L + L+ L L L+ LP F+ L L V R
Sbjct: 267 NLTFLTLSENPLEELPKVLFGEIGGLRELRLKSTQLRTLPAAAFRNLTGLRVLEVSLSPR 326
Query: 248 LDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGP 427
L L RGL L+ L LS L +LP LL L + L +N+L+ LP L R
Sbjct: 327 LSALPEDAFRGLGELQVLALSSTGLASLPAGLLRGLCRLRHVSLRSNRLRALPSALFRNL 386
Query: 428 LKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNN 532
LE + L+ N+L+ L P+L + L +N
Sbjct: 387 SSLEEVQLDHNQLETLPGDAFEALPRLAGVLLGHN 421
Score = 55.1 bits (131), Expect = 1e-07
Identities = 42/134 (31%), Positives = 63/134 (47%)
Frame = +2
Query: 290 LRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQ 469
L H+ L TL ++ T L L L ++ + + P P+KL+ L L N++
Sbjct: 52 LTHILLFQMGRGTLQNNSFSDMTVLQRLLLSDSHVSAIAPGTFNDPIKLKTLRLSRNKIT 111
Query: 470 VLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASLGK 649
L L L LFL+ N+L +L F+ L L L L+ N L +P L+ L
Sbjct: 112 HLPSALLDNLVLLEQLFLDGNELKSLDQNLFQKLVHLQELFLNQNQLAFLPASLFTHL-- 169
Query: 650 AAGNMKVGFDISGN 691
GN+K+ D+SGN
Sbjct: 170 --GNLKL-LDLSGN 180
>ref|XP_002691418.1| PREDICTED: leucine rich repeat transmembrane neuronal 2-like [Bos
taurus].
Length = 535
Score = 106 bits (265), Expect = 3e-23
Identities = 78/253 (30%), Positives = 120/253 (47%), Gaps = 3/253 (1%)
Frame = +2
Query: 59 EGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLK 238
+GI L+EL LS+N++ L K PVP L+ LDL+ N L+ L FK L L L+
Sbjct: 106 QGIRRLKELILSSNKITYLHNKTFHPVPNLRSLDLSYNKLQSLQSEQFKGLRKLIILHLR 165
Query: 239 ENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLL 418
N L + + + L LDL N+LR+L R A L L L +NQ +
Sbjct: 166 SNSLKTVPIRVFQDCRNLDFLDLGYNRLRSLSRNAFAGLLKLKELHLEHNQFSKINFAHF 225
Query: 419 RGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLS 598
L ++L+ NR++ + +G L L L+ N + + G F+ L L L+L
Sbjct: 226 PRLFNLRSIYLQWNRIRSISQGLTWTWSSLHNLDLSGNDIQGIEPGTFKCLPNLQKLNLD 285
Query: 599 NNSLTSVPE---GLWASLGKAAGNMKVGFDISGNPWICDQKLDDLYRWLVANEDKMFFQN 769
+N LT++ + W SL + +SGN W C + + L+ WL K ++
Sbjct: 286 SNKLTNISQETVNAWISL--------ISITLSGNMWECSRSICPLFYWL--KNFKGNKES 335
Query: 770 NTHCAGPKALEGQ 808
CAGPK ++G+
Sbjct: 336 TMICAGPKHMQGE 348
Score = 58.2 bits (139), Expect = 1e-08
Identities = 37/108 (34%), Positives = 57/108 (52%)
Frame = +2
Query: 299 LDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLE 478
L L N ++ L A+ L L L +N + ++ D +G +L+ L L N++ L
Sbjct: 66 LSLRFNSIQKLKSNQFASLNQLIWLYLDHNYISSVDEDAFQGIRRLKELILSSNKITYLH 125
Query: 479 EGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVP 622
P P LR L L+ NKL +L + F+GL+ L +L L +NSL +VP
Sbjct: 126 NKTFHPVPNLRSLDLSYNKLQSLQSEQFKGLRKLIILHLRSNSLKTVP 173
>ref|XP_876920.3| PREDICTED: leucine rich repeat transmembrane neuronal 2-like
isoform 3 [Bos taurus].
Length = 535
Score = 106 bits (265), Expect = 3e-23
Identities = 78/253 (30%), Positives = 120/253 (47%), Gaps = 3/253 (1%)
Frame = +2
Query: 59 EGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLK 238
+GI L+EL LS+N++ L K PVP L+ LDL+ N L+ L FK L L L+
Sbjct: 106 QGIRRLKELILSSNKITYLHNKTFHPVPNLRSLDLSYNKLQSLQSEQFKGLRKLIILHLR 165
Query: 239 ENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLL 418
N L + + + L LDL N+LR+L R A L L L +NQ +
Sbjct: 166 SNSLKTVPIRVFQDCRNLDFLDLGYNRLRSLSRNAFAGLLKLKELHLEHNQFSKINFAHF 225
Query: 419 RGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLS 598
L ++L+ NR++ + +G L L L+ N + + G F+ L L L+L
Sbjct: 226 PRLFNLRSIYLQWNRIRSISQGLTWTWSSLHNLDLSGNDIQGIEPGTFKCLPNLQKLNLD 285
Query: 599 NNSLTSVPE---GLWASLGKAAGNMKVGFDISGNPWICDQKLDDLYRWLVANEDKMFFQN 769
+N LT++ + W SL + +SGN W C + + L+ WL K ++
Sbjct: 286 SNKLTNISQETVNAWISL--------ISITLSGNMWECSRSICPLFYWL--KNFKGNKES 335
Query: 770 NTHCAGPKALEGQ 808
CAGPK ++G+
Sbjct: 336 TMICAGPKHMQGE 348
Score = 58.2 bits (139), Expect = 1e-08
Identities = 37/108 (34%), Positives = 57/108 (52%)
Frame = +2
Query: 299 LDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLE 478
L L N ++ L A+ L L L +N + ++ D +G +L+ L L N++ L
Sbjct: 66 LSLRFNSIQKLKSNQFASLNQLIWLYLDHNYISSVDEDAFQGIRRLKELILSSNKITYLH 125
Query: 479 EGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVP 622
P P LR L L+ NKL +L + F+GL+ L +L L +NSL +VP
Sbjct: 126 NKTFHPVPNLRSLDLSYNKLQSLQSEQFKGLRKLIILHLRSNSLKTVP 173
>ref|NP_001096753.1| leucine-rich repeat transmembrane neuronal protein 3 [Bos taurus].
Length = 536
Score = 99.4 bits (246), Expect = 5e-21
Identities = 75/281 (26%), Positives = 127/281 (45%), Gaps = 28/281 (9%)
Frame = +2
Query: 59 EGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLK 238
+G+ L L+L +N + ++ + +LK L L+ N + F+ L L L
Sbjct: 82 KGLNQLTWLYLDHNHISNIDENAFNGIRRLKELILSSNRISYFLNNTFRPVTNLRNLDLS 141
Query: 239 ENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLL 418
N+L L + RGL+ L L L N LRT+P ++ + +L +LDLG N++++L ++
Sbjct: 142 YNQLHSLGSEQFRGLRKLLSLHLRSNSLRTIPVRIFQDCRNLELLDLGYNRIRSLARNVF 201
Query: 419 RGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLA---AGAFRGLQVLDM- 586
G ++L+ LHLE N+ L L+ L+L NK++ + + + LQ LD+
Sbjct: 202 AGMIRLKELHLEHNQFSKLNLALFPRLVSLQNLYLQWNKISVIGQTMSWTWSSLQRLDLS 261
Query: 587 ---------------------LDLSNNSLTSVPEGL---WASLGKAAGNMKVGFDISGNP 694
L+L +N LT + + + W SL ++GN
Sbjct: 262 GNEIEAFSGPSVFQCVPNLQRLNLDSNKLTFIGQEILDSWISLN--------DISLAGNI 313
Query: 695 WICDQKLDDLYRWLVANEDKMFFQNNTHCAGPKALEGQTLL 817
W C + + L WL K +N CA PK L+G ++
Sbjct: 314 WECSRNICSLVNWL--KSFKGLRENTIICASPKELQGVNVI 352
Score = 69.3 bits (168), Expect = 5e-12
Identities = 50/163 (30%), Positives = 74/163 (45%)
Frame = +2
Query: 155 LDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLP 334
L L N+L++L FK L L L N + +D + G++ L+ L LS N++
Sbjct: 66 LSLRYNSLQKLKYNQFKGLNQLTWLYLDHNHISNIDENAFNGIRRLKELILSSNRISYFL 125
Query: 335 RKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRY 514
T+L LDL NQL +L + RG KL LHL N L+ + L
Sbjct: 126 NNTFRPVTNLRNLDLSYNQLHSLGSEQFRGLRKLLSLHLRSNSLRTIPVRIFQDCRNLEL 185
Query: 515 LFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASL 643
L L N++ +LA F G+ L L L +N + + L+ L
Sbjct: 186 LDLGYNRIRSLARNVFAGMIRLKELHLEHNQFSKLNLALFPRL 228
Score = 50.4 bits (119), Expect = 3e-06
Identities = 37/140 (26%), Positives = 66/140 (47%), Gaps = 1/140 (0%)
Frame = +2
Query: 44 PRRKTEGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALH 223
P R + NL+ L L N++ L+ + +LK L L N +L LF +L
Sbjct: 173 PVRIFQDCRNLELLDLGYNRIRSLARNVFAGMIRLKELHLEHNQFSKLNLALFPRLVSLQ 232
Query: 224 TLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLP-RKLLANFTDLHILDLGNNQLQT 400
L L+ N++ ++ + +L+ LDLSGN++ + +L L+L +N+L
Sbjct: 233 NLYLQWNKISVIGQTMSWTWSSLQRLDLSGNEIEAFSGPSVFQCVPNLQRLNLDSNKLTF 292
Query: 401 LPPDLLRGPLKLEWLHLEGN 460
+ ++L + L + L GN
Sbjct: 293 IGQEILDSWISLNDISLAGN 312
>ref|XP_002693760.1| PREDICTED: reticulon 4 receptor-like 2-like [Bos taurus].
Length = 448
Score = 99.4 bits (246), Expect = 5e-21
Identities = 84/253 (33%), Positives = 110/253 (43%), Gaps = 1/253 (0%)
Frame = +2
Query: 68 PNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENR 247
P Q L L NN + L P L L L N L + PG F+ AL L L +NR
Sbjct: 88 PGTQRLFLQNNLIGALRPGSF--GPSLLTLWLFSNNLSAIYPGTFRHLQALEELDLGDNR 145
Query: 248 -LDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRG 424
L L+ +GL+ L+ L L QL +LP + L L L N L L DL
Sbjct: 146 HLRSLEPDTFQGLERLQSLHLYRCQLSSLPGTIFRGLVSLQYLYLQENSLVHLQDDLFAD 205
Query: 425 PLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNN 604
L L L GNRL++L E L L L+ N+L + AFRGL L +L L NN
Sbjct: 206 LANLSHLFLHGNRLRLLTEHVFRGLGSLDRLLLHGNRLQGVHRAAFRGLGRLTILYLFNN 265
Query: 605 SLTSVPEGLWASLGKAAGNMKVGFDISGNPWICDQKLDDLYRWLVANEDKMFFQNNTHCA 784
SL S+P A L ++ NPW CD + L+ W + ++ CA
Sbjct: 266 SLASLPGEALADLPSLE-----FLRLNANPWACDCRARPLWAWF---QRARVSSSDVTCA 317
Query: 785 GPKALEGQTLLAV 823
P G+ L A+
Sbjct: 318 SPPERRGRDLRAL 330
Score = 67.4 bits (163), Expect = 2e-11
Identities = 50/134 (37%), Positives = 63/134 (47%)
Frame = +2
Query: 59 EGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLK 238
+G+ LQ LHL QL L + L+ L L N+L L LF A L L L
Sbjct: 156 QGLERLQSLHLYRCQLSSLPGTIFRGLVSLQYLYLQENSLVHLQDDLFADLANLSHLFLH 215
Query: 239 ENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLL 418
NRL +L RGL +L L L GN+L+ + R L IL L NN L +LP + L
Sbjct: 216 GNRLRLLTEHVFRGLGSLDRLLLHGNRLQGVHRAAFRGLGRLTILYLFNNSLASLPGEAL 275
Query: 419 RGPLKLEWLHLEGN 460
LE+L L N
Sbjct: 276 ADLPSLEFLRLNAN 289
>ref|XP_607470.4| PREDICTED: reticulon 4 receptor-like 2-like [Bos taurus].
Length = 460
Score = 99.4 bits (246), Expect = 5e-21
Identities = 84/253 (33%), Positives = 110/253 (43%), Gaps = 1/253 (0%)
Frame = +2
Query: 68 PNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENR 247
P Q L L NN + L P L L L N L + PG F+ AL L L +NR
Sbjct: 100 PGTQRLFLQNNLIGALRPGSF--GPSLLTLWLFSNNLSAIYPGTFRHLQALEELDLGDNR 157
Query: 248 -LDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRG 424
L L+ +GL+ L+ L L QL +LP + L L L N L L DL
Sbjct: 158 HLRSLEPDTFQGLERLQSLHLYRCQLSSLPGTIFRGLVSLQYLYLQENSLVHLQDDLFAD 217
Query: 425 PLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNN 604
L L L GNRL++L E L L L+ N+L + AFRGL L +L L NN
Sbjct: 218 LANLSHLFLHGNRLRLLTEHVFRGLGSLDRLLLHGNRLQGVHRAAFRGLGRLTILYLFNN 277
Query: 605 SLTSVPEGLWASLGKAAGNMKVGFDISGNPWICDQKLDDLYRWLVANEDKMFFQNNTHCA 784
SL S+P A L ++ NPW CD + L+ W + ++ CA
Sbjct: 278 SLASLPGEALADLPSLE-----FLRLNANPWACDCRARPLWAWF---QRARVSSSDVTCA 329
Query: 785 GPKALEGQTLLAV 823
P G+ L A+
Sbjct: 330 SPPERRGRDLRAL 342
Score = 67.4 bits (163), Expect = 2e-11
Identities = 50/134 (37%), Positives = 63/134 (47%)
Frame = +2
Query: 59 EGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLK 238
+G+ LQ LHL QL L + L+ L L N+L L LF A L L L
Sbjct: 168 QGLERLQSLHLYRCQLSSLPGTIFRGLVSLQYLYLQENSLVHLQDDLFADLANLSHLFLH 227
Query: 239 ENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLL 418
NRL +L RGL +L L L GN+L+ + R L IL L NN L +LP + L
Sbjct: 228 GNRLRLLTEHVFRGLGSLDRLLLHGNRLQGVHRAAFRGLGRLTILYLFNNSLASLPGEAL 287
Query: 419 RGPLKLEWLHLEGN 460
LE+L L N
Sbjct: 288 ADLPSLEFLRLNAN 301
>ref|NP_001192520.1| leucine-rich repeats and immunoglobulin-like domains protein 3 [Bos
taurus].
Length = 1119
Score = 97.4 bits (241), Expect = 2e-20
Identities = 75/281 (26%), Positives = 127/281 (45%), Gaps = 27/281 (9%)
Frame = +2
Query: 65 IPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKEN 244
+P LQ L L+ N+++++ + LK L + RN + RL G F + + L L N
Sbjct: 214 LPQLQHLELNRNKIKNIDGLTFQGLGALKSLKMQRNGVTRLMDGAFWGLSNMEILQLDHN 273
Query: 245 RLDILDASWLRGL------------------------KALRHLDLSGNQLRTLPRKLLAN 352
L + WL GL + L LDL+ N L L
Sbjct: 274 NLTEITKGWLYGLLMLQELHLSQNAISRISPDAWEFCQKLSELDLTYNHLSRLDDSSFLG 333
Query: 353 FTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEE---GFLAPQPKLRYLFL 523
+ L+ L +GNN++ + RG L+ L L+ N + E G + KL+ L L
Sbjct: 334 LSLLNTLHIGNNRVNYIADCAFRGLSSLKTLDLKNNEISWTIEDMNGAFSGLDKLKRLIL 393
Query: 524 NNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASLGKAAGNMKVGFDISGNPWIC 703
N++ ++ AF GL L+ LDLS+N++ S+ ++ + K ++ + +C
Sbjct: 394 QGNRIRSITKKAFTGLDALEHLDLSDNAIMSLQGNAFSQMKKLQ-----QLHLNTSSLLC 448
Query: 704 DQKLDDLYRWLVANEDKMFFQNNTHCAGPKALEGQTLLAVA 826
D +L L +W+ N + F N CA P+ L+G+++ AV+
Sbjct: 449 DCQLKWLPQWVAENNFQSFV--NASCAHPQLLKGRSIFAVS 487
Score = 75.1 bits (183), Expect = 1e-13
Identities = 55/160 (34%), Positives = 86/160 (53%), Gaps = 3/160 (1%)
Frame = +2
Query: 152 VLDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTL 331
+LD +R L LP L A L L NRL + AS L L +LR + L+ N+L T+
Sbjct: 57 LLDCSRQRLAHLPEPLPSWIARLD---LSHNRLSFIKASSLSHLHSLREVKLNNNELETI 113
Query: 332 PR--KLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPK 505
P + AN T +L L N++ + P+ LR LE L L GN + L+ P +
Sbjct: 114 PNLGPVTANIT---LLSLAGNKIVEILPEHLRQFQSLETLDLSGNNISELKTAL--PPLQ 168
Query: 506 LRYLFLNNNKLTTLAAGAFRGL-QVLDMLDLSNNSLTSVP 622
L+YL++N+N++T++ G F L L +L L+ N ++++P
Sbjct: 169 LKYLYINSNRVTSMEPGYFDNLASTLLVLKLNRNRISALP 208
Score = 69.3 bits (168), Expect = 5e-12
Identities = 54/192 (28%), Positives = 92/192 (47%), Gaps = 1/192 (0%)
Frame = +2
Query: 71 NLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLF-KVSAALHTLVLKENR 247
+L+ L LS N + +L K LP QLK L + N + + PG F +++ L L L NR
Sbjct: 146 SLETLDLSGNNISEL--KTALPPLQLKYLYINSNRVTSMEPGYFDNLASTLLVLKLNRNR 203
Query: 248 LDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGP 427
+ L + L L+HL+L+ N+++ + L L + N + L G
Sbjct: 204 ISALPPKMFK-LPQLQHLELNRNKIKNIDGLTFQGLGALKSLKMQRNGVTRLMDGAFWGL 262
Query: 428 LKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNS 607
+E L L+ N L + +G+L L+ L L+ N ++ ++ A+ Q L LDL+ N
Sbjct: 263 SNMEILQLDHNNLTEITKGWLYGLLMLQELHLSQNAISRISPDAWEFCQKLSELDLTYNH 322
Query: 608 LTSVPEGLWASL 643
L+ + + + L
Sbjct: 323 LSRLDDSSFLGL 334
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 43,934,867
Number of extensions: 1393984
Number of successful extensions: 10148
Number of sequences better than 1.0e-05: 221
Number of HSP's gapped: 8564
Number of HSP's successfully gapped: 757
Length of query: 352
Length of database: 17,681,374
Length adjustment: 103
Effective length of query: 249
Effective length of database: 14,273,310
Effective search space: 3554054190
Effective search space used: 3554054190
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-001977
(1058 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_854692.1| PREDICTED: similar to leucine-rich alpha-2-glyc... 393 e-109
Alignment gi|XP_545165.2| PREDICTED: similar to Carboxypeptidase N subuni... 133 2e-31
Alignment gi|XP_545164.2| PREDICTED: similar to leucine rich repeat conta... 122 4e-28
Alignment gi|XP_538355.2| PREDICTED: similar to Ran GTPase-activating pro... 114 2e-25
Alignment gi|XP_852514.1| PREDICTED: similar to Leucine-rich repeat trans... 106 4e-23
Alignment gi|XP_540206.2| PREDICTED: similar to Leucine-rich repeat trans... 106 4e-23
Alignment gi|XP_547189.2| PREDICTED: similar to insulin-like growth facto... 101 1e-21
Alignment gi|XP_542026.2| PREDICTED: similar to Fibromodulin precursor (F... 100 2e-21
Alignment gi|XP_852404.1| PREDICTED: similar to Chondroadherin precursor ... 100 4e-21
Alignment gi|XP_546127.2| PREDICTED: similar to Leucine-rich repeat trans... 99 5e-21
>ref|XP_854692.1| PREDICTED: similar to leucine-rich alpha-2-glycoprotein 1 [Canis
familiaris].
Length = 347
Score = 393 bits (1010), Expect = e-109
Identities = 199/258 (77%), Positives = 221/258 (85%)
Frame = +2
Query: 59 EGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLK 238
+G+ NLQELHLS NQLE LS K LLPVP LKVLDLTRNAL +LPPGLF+VSAALHTLVLK
Sbjct: 89 QGVSNLQELHLSTNQLESLSPKLLLPVPLLKVLDLTRNALTQLPPGLFRVSAALHTLVLK 148
Query: 239 ENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLL 418
ENRL++L+ SWL GLKAL HLDLSGN L+TLP LLAN T L ILDL NNQL+TLP DLL
Sbjct: 149 ENRLEVLEPSWLCGLKALGHLDLSGNHLQTLPPGLLANVTALRILDLSNNQLKTLPLDLL 208
Query: 419 RGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLS 598
RGPL+LE LHLEGNRLQVLEEG LAPQP LRYLFL++NKL +AAGAFRGLQ LDMLDLS
Sbjct: 209 RGPLQLERLHLEGNRLQVLEEGLLAPQPGLRYLFLSDNKLAAVAAGAFRGLQQLDMLDLS 268
Query: 599 NNSLTSVPEGLWASLGKAAGNMKVGFDISGNPWICDQKLDDLYRWLVANEDKMFFQNNTH 778
NNSLTSVP+GLW SLG+ +M+ GFDISGNPWICD LDDLYRWLVAN+DKMF +N+T
Sbjct: 269 NNSLTSVPKGLWTSLGQPTRDMEDGFDISGNPWICDHNLDDLYRWLVANKDKMFSRNDTR 328
Query: 779 CAGPKALEGQTLLAVAAS 832
CA P+AL+GQTLL A S
Sbjct: 329 CARPEALKGQTLLEAAES 346
Score = 82.0 bits (201), Expect = 9e-16
Identities = 55/132 (41%), Positives = 71/132 (53%)
Frame = +2
Query: 227 LVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLP 406
LV++ L L L+G+ L+ L LS NQL +L KLL L +LDL N L LP
Sbjct: 73 LVVEFFNLTQLRPDTLQGVSNLQELHLSTNQLESLSPKLLLPVPLLKVLDLTRNALTQLP 132
Query: 407 PDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDM 586
P L R L L L+ NRL+VLE +L L +L L+ N L TL G + L +
Sbjct: 133 PGLFRVSAALHTLVLKENRLEVLEPSWLCGLKALGHLDLSGNHLQTLPPGLLANVTALRI 192
Query: 587 LDLSNNSLTSVP 622
LDLSNN L ++P
Sbjct: 193 LDLSNNQLKTLP 204
Score = 58.5 bits (140), Expect = 1e-08
Identities = 40/107 (37%), Positives = 54/107 (50%)
Frame = +2
Query: 23 GHHVLLEPRRKTEGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLF 202
G+H+ P + L+ L LSNNQL+ L L QL+ L L N L+ L GL
Sbjct: 173 GNHLQTLPPGLLANVTALRILDLSNNQLKTLPLDLLRGPLQLERLHLEGNRLQVLEEGLL 232
Query: 203 KVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKL 343
L L L +N+L + A RGL+ L LDLS N L ++P+ L
Sbjct: 233 APQPGLRYLFLSDNKLAAVAAGAFRGLQQLDMLDLSNNSLTSVPKGL 279
>ref|XP_545165.2| PREDICTED: similar to Carboxypeptidase N subunit 2 precursor
(Carboxypeptidase N polypeptide 2) (Carboxypeptidase N 83
kDa chain) (Carboxypeptidase N regulatory subunit)
(Carboxypeptidase N large subunit) [Canis familiaris].
Length = 547
Score = 133 bits (335), Expect = 2e-31
Identities = 95/293 (32%), Positives = 135/293 (46%), Gaps = 43/293 (14%)
Frame = +2
Query: 74 LQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLD 253
L+ L L N+L+ L + P+ +L+ L+L +N L LP GLF +L TL L +N L
Sbjct: 147 LESLQLQGNRLQSLPRRLFQPLTRLQSLNLAQNLLAHLPEGLFDPLGSLQTLRLSDNALS 206
Query: 254 ILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLK 433
L GL +LR L L GN + LP + + L L L N + LP +
Sbjct: 207 GLPPGVFGGLHSLRELFLDGNSISELPPGVFSRLFRLEQLWLQRNAIGHLPLSVFSSLGN 266
Query: 434 LEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLT 613
L +L L+GN L+VL G AP P L L L+ NKL ++ GAF L L L LS+N++T
Sbjct: 267 LTFLSLQGNALRVLPAGLFAPTPGLLVLSLSYNKLEAVSEGAFANLSSLSSLTLSHNAIT 326
Query: 614 SVPEG--------------------LWASLGKAAGNMKV--------------------- 670
+P G L +L + N+++
Sbjct: 327 HLPAGVFRGLEGLVKLYLGSNNLTALHPTLFQNLSNLELLSLSRNLLTTLPTGIFDSNYN 386
Query: 671 --GFDISGNPWICDQKLDDLYRWLVANEDKMFFQNNTHCAGPKALEGQTLLAV 823
+ GNPW CD L L++WL D++ F T+CAGP L+GQ L A+
Sbjct: 387 LFNLALHGNPWQCDCHLAYLFQWLYQYSDRL-FNIQTYCAGPAYLKGQVLPAL 438
Score = 90.5 bits (223), Expect = 2e-18
Identities = 64/199 (32%), Positives = 92/199 (46%)
Frame = +2
Query: 50 RKTEGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTL 229
R G PNL ++ N L+ L +P+L+ L++T A L F +L
Sbjct: 67 RAFSGSPNLTKVVFLNAPLQHLGPDAFGGLPRLQDLEVTGGAFTNLSSAAFSNLTSLGKF 126
Query: 230 VLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPP 409
N L+ L ++AL L L GN+L++LPR+L T L L+L N L LP
Sbjct: 127 TFNFNLLEALPEGLFGHMEALESLQLQGNRLQSLPRRLFQPLTRLQSLNLAQNLLAHLPE 186
Query: 410 DLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDML 589
L L+ L L N L L G LR LFL+ N ++ L G F L L+ L
Sbjct: 187 GLFDPLGSLQTLRLSDNALSGLPPGVFGGLHSLRELFLDGNSISELPPGVFSRLFRLEQL 246
Query: 590 DLSNNSLTSVPEGLWASLG 646
L N++ +P +++SLG
Sbjct: 247 WLQRNAIGHLPLSVFSSLG 265
Score = 66.2 bits (160), Expect = 5e-11
Identities = 51/157 (32%), Positives = 68/157 (43%)
Frame = +2
Query: 173 ALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLAN 352
+L L F S L +V L L GL L+ L+++G L +N
Sbjct: 60 SLSALGSRAFSGSPNLTKVVFLNAPLQHLGPDAFGGLPRLQDLEVTGGAFTNLSSAAFSN 119
Query: 353 FTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNN 532
T L N L+ LP L LE L L+GNRLQ L P +L+ L L N
Sbjct: 120 LTSLGKFTFNFNLLEALPEGLFGHMEALESLQLQGNRLQSLPRRLFQPLTRLQSLNLAQN 179
Query: 533 KLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASL 643
L L G F L L L LS+N+L+ +P G++ L
Sbjct: 180 LLAHLPEGLFDPLGSLQTLRLSDNALSGLPPGVFGGL 216
>ref|XP_545164.2| PREDICTED: similar to leucine rich repeat containing 15 [Canis
familiaris].
Length = 614
Score = 122 bits (307), Expect = 4e-28
Identities = 80/260 (30%), Positives = 120/260 (46%)
Frame = +2
Query: 44 PRRKTEGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALH 223
P +G NLQEL L NQ+ LS L+ L L+ N + +LPPG+F L+
Sbjct: 244 PMGTFDGCGNLQELALQQNQIGMLSPGLFHNNRNLQKLYLSNNHISQLPPGIFMQLPQLN 303
Query: 224 TLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTL 403
L L N L L + LR L L N + +LP + +N L +L L NQ+ +
Sbjct: 304 RLTLFGNSLKELSPGIFGPMHNLRELWLYDNHITSLPDNVFSNLHQLQVLILSRNQINYI 363
Query: 404 PPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLD 583
PD G ++L L L N LQ L+ L+ + L NN+L L F + L
Sbjct: 364 SPDAFNGLVELRELSLHTNALQELDGSVFRMLVNLQNISLQNNRLRQLPGNIFANVNGLM 423
Query: 584 MLDLSNNSLTSVPEGLWASLGKAAGNMKVGFDISGNPWICDQKLDDLYRWLVANEDKMFF 763
+ L NN L ++P G++ LG + NPW CD + L+ WL+ N+ ++
Sbjct: 424 TIQLQNNQLENLPMGIFDHLGNLC-----ELRLYDNPWRCDSDILPLHNWLLLNKPRLGT 478
Query: 764 QNNTHCAGPKALEGQTLLAV 823
C P ++ GQ+L+ +
Sbjct: 479 DTLPVCFSPPSVRGQSLIII 498
Score = 84.0 bits (206), Expect = 2e-16
Identities = 62/195 (31%), Positives = 91/195 (46%)
Frame = +2
Query: 59 EGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLK 238
+G+ NL+ L LS+NQL + LK L L N L+ +P G+F L L L
Sbjct: 153 QGLNNLESLLLSSNQLVQIQPAHFSQFSNLKELQLHGNHLEYIPDGVFDHLVGLTKLNLG 212
Query: 239 ENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLL 418
+N L L + L L+ L L N+L +P +L L L NQ+ L P L
Sbjct: 213 KNSLTHLSPRIFQRLGNLQVLRLYENRLSEIPMGTFDGCGNLQELALQQNQIGMLSPGLF 272
Query: 419 RGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLS 598
L+ L+L N + L G P+L L L N L L+ G F + L L L
Sbjct: 273 HNNRNLQKLYLSNNHISQLPPGIFMQLPQLNRLTLFGNSLKELSPGIFGPMHNLRELWLY 332
Query: 599 NNSLTSVPEGLWASL 643
+N +TS+P+ ++++L
Sbjct: 333 DNHITSLPDNVFSNL 347
Score = 80.5 bits (197), Expect = 2e-15
Identities = 58/193 (30%), Positives = 89/193 (46%)
Frame = +2
Query: 65 IPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKEN 244
I L L + N+L + + L+ L L N L+ LP GLF+ L +L+L N
Sbjct: 107 ISALIALRIEKNELSHIMPGAFRNLGSLRYLSLANNKLQVLPIGLFQGLNNLESLLLSSN 166
Query: 245 RLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRG 424
+L + + L+ L L GN L +P + + L L+LG N L L P + +
Sbjct: 167 QLVQIQPAHFSQFSNLKELQLHGNHLEYIPDGVFDHLVGLTKLNLGKNSLTHLSPRIFQR 226
Query: 425 PLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNN 604
L+ L L NRL + G L+ L L N++ L+ G F + L L LSNN
Sbjct: 227 LGNLQVLRLYENRLSEIPMGTFDGCGNLQELALQQNQIGMLSPGLFHNNRNLQKLYLSNN 286
Query: 605 SLTSVPEGLWASL 643
++ +P G++ L
Sbjct: 287 HISQLPPGIFMQL 299
Score = 75.9 bits (185), Expect = 6e-14
Identities = 55/191 (28%), Positives = 90/191 (47%)
Frame = +2
Query: 71 NLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRL 250
+L+ L L+NN+L+ L + L+ L L+ N L ++ P F + L L L N L
Sbjct: 133 SLRYLSLANNKLQVLPIGLFQGLNNLESLLLSSNQLVQIQPAHFSQFSNLKELQLHGNHL 192
Query: 251 DILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPL 430
+ + L L L+L N L L ++ +L +L L N+L +P G
Sbjct: 193 EYIPDGVFDHLVGLTKLNLGKNSLTHLSPRIFQRLGNLQVLRLYENRLSEIPMGTFDGCG 252
Query: 431 KLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSL 610
L+ L L+ N++ +L G L+ L+L+NN ++ L G F L L+ L L NSL
Sbjct: 253 NLQELALQQNQIGMLSPGLFHNNRNLQKLYLSNNHISQLPPGIFMQLPQLNRLTLFGNSL 312
Query: 611 TSVPEGLWASL 643
+ G++ +
Sbjct: 313 KELSPGIFGPM 323
Score = 68.9 bits (167), Expect = 8e-12
Identities = 54/192 (28%), Positives = 80/192 (41%)
Frame = +2
Query: 71 NLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRL 250
N L + N + +L+ L + L L + +N L + PG F
Sbjct: 85 NAMSLQILNTHITELNESPFLNISALIALRIEKNELSHIMPGAF---------------- 128
Query: 251 DILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPL 430
R L +LR+L L+ N+L+ LP L +L L L +NQL + P
Sbjct: 129 --------RNLGSLRYLSLANNKLQVLPIGLFQGLNNLESLLLSSNQLVQIQPAHFSQFS 180
Query: 431 KLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSL 610
L+ L L GN L+ + +G L L L N LT L+ F+ L L +L L N L
Sbjct: 181 NLKELQLHGNHLEYIPDGVFDHLVGLTKLNLGKNSLTHLSPRIFQRLGNLQVLRLYENRL 240
Query: 611 TSVPEGLWASLG 646
+ +P G + G
Sbjct: 241 SEIPMGTFDGCG 252
Score = 51.6 bits (122), Expect = 1e-06
Identities = 35/120 (29%), Positives = 55/120 (45%), Gaps = 3/120 (2%)
Frame = +2
Query: 26 HHVLLEPRRKTEGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFK 205
+H+ P + LQ L LS NQ+ +S + +L+ L L NAL+ L +F+
Sbjct: 334 NHITSLPDNVFSNLHQLQVLILSRNQINYISPDAFNGLVELRELSLHTNALQELDGSVFR 393
Query: 206 VSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKL---LANFTDLHILD 376
+ L + L+ NRL L + + L + L NQL LP + L N +L + D
Sbjct: 394 MLVNLQNISLQNNRLRQLPGNIFANVNGLMTIQLQNNQLENLPMGIFDHLGNLCELRLYD 453
>ref|XP_538355.2| PREDICTED: similar to Ran GTPase-activating protein 1 [Canis
familiaris].
Length = 1323
Score = 114 bits (284), Expect = 2e-25
Identities = 90/261 (34%), Positives = 130/261 (49%), Gaps = 2/261 (0%)
Frame = +2
Query: 62 GIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKE 241
G+ +L L+LS+N+L LSA L P+L L L RN +R+P + L +L L+
Sbjct: 1050 GLASLIYLYLSDNRLAGLSAAALEGAPRLAYLYLERNRFQRVPGTALRALPGLFSLHLQH 1109
Query: 242 NRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLR 421
N ++ L+ L G +ALR L LS N++ + + DL L L NQLQ +P L
Sbjct: 1110 NAVERLEPGDLAGSQALRWLYLSANRISHVSPGAIGPAPDLEKLYLDRNQLQGVPTVALE 1169
Query: 422 GPLKLEWLHLEGNRLQVLEEGFLAP-QPKLRYLFLNNNKLTTLAAGAFRGL-QVLDMLDL 595
G L L L GN L+ L +G P L++LFLN++ L ++ AF GL L L L
Sbjct: 1170 GLPTLLELQLSGNPLRALPDGAFRPVGGSLQHLFLNSSGLEQISPRAFSGLGPWLQSLHL 1229
Query: 596 SNNSLTSVPEGLWASLGKAAGNMKVGFDISGNPWICDQKLDDLYRWLVANEDKMFFQNNT 775
N L ++P S + D+SGNP+ CD +L L+RWL+ + +
Sbjct: 1230 QKNQLQAMPALPHLSQLEL-------IDLSGNPFHCDCQLLPLHRWLIG----LNLRVGA 1278
Query: 776 HCAGPKALEGQTLLAVAASLE 838
CA P + GQ + A A E
Sbjct: 1279 TCATPPSAHGQRVKAATAVFE 1299
Score = 100 bits (249), Expect = 2e-21
Identities = 88/257 (34%), Positives = 115/257 (44%)
Frame = +2
Query: 62 GIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKE 241
G+ LQ L+L++N+L L + L + L+ LDL RN L+ L PG F AL TL L
Sbjct: 690 GLGRLQILNLASNRLSSLPQEALDGLGSLQRLDLERNVLEELRPGTFGALGALTTLNLAH 749
Query: 242 NRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLR 421
N L L A +GL R L LS N L L + LA L L L +N+LQ LP L
Sbjct: 750 NALVYLPAMTFQGLPRARWLRLSHNALSVLDPEALAGLPALRRLSLQHNELQALPGLALS 809
Query: 422 GPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSN 601
L L L N + E P LR L L + L L A AF L LDL
Sbjct: 810 QARALARLELGHNPFTYVGEEDGLALPGLRELTLEHGALQALDARAFARCPRLHTLDLRG 869
Query: 602 NSLTSVPEGLWASLGKAAGNMKVGFDISGNPWICDQKLDDLYRWLVANEDKMFFQNNTHC 781
N L +VP + G ++ + GNP C + L WL + ++ C
Sbjct: 870 NQLDTVPP------LQGPGQLR-RLRLHGNPLWCGCRARPLLEWLA----RARVHSDGAC 918
Query: 782 AGPKALEGQTLLAVAAS 832
GP+ L G+ L A+ S
Sbjct: 919 RGPRRLGGEALDALRPS 935
Score = 81.6 bits (200), Expect = 1e-15
Identities = 68/203 (33%), Positives = 89/203 (43%), Gaps = 4/203 (1%)
Frame = +2
Query: 29 HVLLEPRRKTE---GIPNL-QELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPG 196
HV + TE +P L Q L L N L+ + +P L LDL ++ + G
Sbjct: 627 HVACRHQNLTEVPDAVPELTQRLDLQGNLLKVIPPAAFRDLPYLTHLDLRHCQVELVAEG 686
Query: 197 LFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILD 376
F+ L L L NRL L L GL +L+ LDL N L L L L+
Sbjct: 687 AFRGLGRLQILNLASNRLSSLPQEALDGLGSLQRLDLERNVLEELRPGTFGALGALTTLN 746
Query: 377 LGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAG 556
L +N L LP +G + WL L N L VL+ LA P LR L L +N+L L
Sbjct: 747 LAHNALVYLPAMTFQGLPRARWLRLSHNALSVLDPEALAGLPALRRLSLQHNELQALPGL 806
Query: 557 AFRGLQVLDMLDLSNNSLTSVPE 625
A + L L+L +N T V E
Sbjct: 807 ALSQARALARLELGHNPFTYVGE 829
Score = 70.9 bits (172), Expect = 2e-12
Identities = 51/141 (36%), Positives = 66/141 (46%)
Frame = +2
Query: 44 PRRKTEGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALH 223
P +G+P + L LS+N L L + L +P L+ L L N L+ LP + AL
Sbjct: 756 PAMTFQGLPRARWLRLSHNALSVLDPEALAGLPALRRLSLQHNELQALPGLALSQARALA 815
Query: 224 TLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTL 403
L L N + L LR L L L+ L + A LH LDL NQL T+
Sbjct: 816 RLELGHNPFTYVGEEDGLALPGLRELTLEHGALQALDARAFARCPRLHTLDLRGNQLDTV 875
Query: 404 PPDLLRGPLKLEWLHLEGNRL 466
PP L+GP +L L L GN L
Sbjct: 876 PP--LQGPGQLRRLRLHGNPL 894
Score = 58.5 bits (140), Expect = 1e-08
Identities = 51/169 (30%), Positives = 77/169 (45%)
Frame = +2
Query: 146 LKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLR 325
LK LD A +R PP + H +N ++ DA + + LDL GN L+
Sbjct: 603 LKDLDGAGTA-QRCPPTCVCDNPRRHVACRHQNLTEVPDAV----PELTQRLDLQGNLLK 657
Query: 326 TLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPK 505
+P + L LDL + Q++ + RG +L+ L+L NRL L + L
Sbjct: 658 VIPPAAFRDLPYLTHLDLRHCQVELVAEGAFRGLGRLQILNLASNRLSSLPQEALDGLGS 717
Query: 506 LRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASLGKA 652
L+ L L N L L G F L L L+L++N+L +P + L +A
Sbjct: 718 LQRLDLERNVLEELRPGTFGALGALTTLNLAHNALVYLPAMTFQGLPRA 766
>ref|XP_852514.1| PREDICTED: similar to Leucine-rich repeat transmembrane neuronal
protein 4 precursor isoform 2 [Canis familiaris].
Length = 519
Score = 106 bits (264), Expect = 4e-23
Identities = 78/253 (30%), Positives = 120/253 (47%), Gaps = 3/253 (1%)
Frame = +2
Query: 59 EGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLK 238
+GI L+EL LS+N++ L K PVP L+ LDL+ N L+ L FK L L L+
Sbjct: 107 QGIRRLKELILSSNKITYLHNKTFHPVPNLRNLDLSYNKLQTLQSEQFKGLRKLIILHLR 166
Query: 239 ENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLL 418
N L + + + L LDL N+LR+L R A L L L +NQ +
Sbjct: 167 SNSLKTVPIRVFQDCRNLDFLDLGYNRLRSLSRNAFAGLLKLKELHLEHNQFSKINFAHF 226
Query: 419 RGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLS 598
L ++L+ NR++ + +G L L L+ N + + G F+ L L L+L
Sbjct: 227 PRLFNLRSIYLQWNRIRSISQGLTWTWSSLHNLDLSGNDIQGIEPGTFKCLPNLQKLNLD 286
Query: 599 NNSLTSVPE---GLWASLGKAAGNMKVGFDISGNPWICDQKLDDLYRWLVANEDKMFFQN 769
+N LT++ + W SL + +SGN W C + + L+ WL K ++
Sbjct: 287 SNKLTNISQETVNAWISL--------ISITLSGNMWECSRSICPLFYWL--KNFKGNKES 336
Query: 770 NTHCAGPKALEGQ 808
CAGPK ++G+
Sbjct: 337 TMICAGPKHIQGE 349
>ref|XP_540206.2| PREDICTED: similar to Leucine-rich repeat transmembrane neuronal
protein 4 precursor isoform 1 [Canis familiaris].
Length = 518
Score = 106 bits (264), Expect = 4e-23
Identities = 78/253 (30%), Positives = 120/253 (47%), Gaps = 3/253 (1%)
Frame = +2
Query: 59 EGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLK 238
+GI L+EL LS+N++ L K PVP L+ LDL+ N L+ L FK L L L+
Sbjct: 106 QGIRRLKELILSSNKITYLHNKTFHPVPNLRNLDLSYNKLQTLQSEQFKGLRKLIILHLR 165
Query: 239 ENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLL 418
N L + + + L LDL N+LR+L R A L L L +NQ +
Sbjct: 166 SNSLKTVPIRVFQDCRNLDFLDLGYNRLRSLSRNAFAGLLKLKELHLEHNQFSKINFAHF 225
Query: 419 RGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLS 598
L ++L+ NR++ + +G L L L+ N + + G F+ L L L+L
Sbjct: 226 PRLFNLRSIYLQWNRIRSISQGLTWTWSSLHNLDLSGNDIQGIEPGTFKCLPNLQKLNLD 285
Query: 599 NNSLTSVPE---GLWASLGKAAGNMKVGFDISGNPWICDQKLDDLYRWLVANEDKMFFQN 769
+N LT++ + W SL + +SGN W C + + L+ WL K ++
Sbjct: 286 SNKLTNISQETVNAWISL--------ISITLSGNMWECSRSICPLFYWL--KNFKGNKES 335
Query: 770 NTHCAGPKALEGQ 808
CAGPK ++G+
Sbjct: 336 TMICAGPKHIQGE 348
>ref|XP_547189.2| PREDICTED: similar to insulin-like growth factor binding protein,
acid labile subunit [Canis familiaris].
Length = 676
Score = 101 bits (252), Expect = 1e-21
Identities = 68/202 (33%), Positives = 104/202 (51%)
Frame = +2
Query: 44 PRRKTEGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALH 223
P +G+ +L+EL L+ N+L L + +L+ LDL+RNAL+ + +F L
Sbjct: 257 PDAAFQGLASLRELVLAGNKLAYLQPPLFCGLGELRELDLSRNALRSVKANVFVKLPKLQ 316
Query: 224 TLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTL 403
L L N + + G+KALR LDLS N++ L LH+L L +N + L
Sbjct: 317 KLYLDHNVIAAVAPGAFLGMKALRWLDLSHNRVAGLLEDTFPGLLGLHVLRLSHNAIAGL 376
Query: 404 PPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLD 583
P R LE L L NR++ L + +L L LN+N++ + AGAF GL +
Sbjct: 377 RPRTFRDLHFLEELRLGHNRIRQLPDKAFEGLGQLEVLTLNDNQIREIEAGAFVGLLSVA 436
Query: 584 MLDLSNNSLTSVPEGLWASLGK 649
+++LS N L S+PE + LG+
Sbjct: 437 VMNLSGNCLRSLPERTFQGLGR 458
Score = 98.2 bits (243), Expect = 1e-20
Identities = 69/194 (35%), Positives = 101/194 (52%)
Frame = +2
Query: 38 LEPRRKTEGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAA 217
LEPR G+ L+ LHL NQL L A L P L L L+ N L R+ GLF+ A
Sbjct: 184 LEPRALL-GLQQLRHLHLERNQLRGLGAHTFLHTPGLASLGLSNNMLGRVDEGLFRGLAD 242
Query: 218 LHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQ 397
L L L N L +L + +GL +LR L L+GN+L L L +L LDL N L+
Sbjct: 243 LWDLHLGWNGLAVLPDAAFQGLASLRELVLAGNKLAYLQPPLFCGLGELRELDLSRNALR 302
Query: 398 TLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQV 577
++ ++ KL+ L+L+ N + + G LR+L L++N++ L F GL
Sbjct: 303 SVKANVFVKLPKLQKLYLDHNVIAAVAPGAFLGMKALRWLDLSHNRVAGLLEDTFPGLLG 362
Query: 578 LDMLDLSNNSLTSV 619
L +L LS+N++ +
Sbjct: 363 LHVLRLSHNAIAGL 376
Score = 96.7 bits (239), Expect = 3e-20
Identities = 85/289 (29%), Positives = 127/289 (43%), Gaps = 25/289 (8%)
Frame = +2
Query: 23 GHHVLLE-PRRKTEGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGL 199
GH+ + + P + EG+ L+ L L++NQ+ ++ A + + + V++L+ N L+ LP
Sbjct: 393 GHNRIRQLPDKAFEGLGQLEVLTLNDNQIREIEAGAFVGLLSVAVMNLSGNCLRSLPERT 452
Query: 200 FKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDL 379
F+ LH+L L+ L + GL LR L L N + + + L +L LDL
Sbjct: 453 FQGLGRLHSLHLERGCLGRVRPHAFAGLSGLRRLFLKHNGITAVDEQGLWGLAELLELDL 512
Query: 380 GNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGA 559
N+L LP +G KLE+L L GN+L L L P +L +L +++N+L L G
Sbjct: 513 TANRLTHLPARAFQGLGKLEYLLLSGNQLAALAADSLRPLRRLFWLDVSHNRLEALPDGE 572
Query: 560 FRGLQVLDMLDLSNNSL------TSVPEGLWASLGKAAGNMKVGFDISGNPWICDQKLDD 721
L L L L+NNSL + E LW + NPW C L
Sbjct: 573 LAELGQLRYLSLTNNSLRIFTPPATGLERLW---------------LGDNPWDCGCALGA 617
Query: 722 LYRWLVANE------------------DKMFFQNNTHCAGPKALEGQTL 814
L R L E ++ NN CAGP + G L
Sbjct: 618 L-RALALREPGVVPRLVQAAPEGDDGQPPIYVSNNITCAGPPGVSGLDL 665
Score = 95.9 bits (237), Expect = 6e-20
Identities = 70/214 (32%), Positives = 102/214 (47%)
Frame = +2
Query: 2 WLDGKGRGHHVLLEPRRKTEGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALK 181
WLDG +++ P + + +L L+L + L L + LL + QL+ L L RN L+
Sbjct: 151 WLDG----NNLFSIPEAAFQNLSSLGFLNLQGSGLASLEPRALLGLQQLRHLHLERNQLR 206
Query: 182 RLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTD 361
L F + L +L L N L +D RGL L L L N L LP
Sbjct: 207 GLGAHTFLHTPGLASLGLSNNMLGRVDEGLFRGLADLWDLHLGWNGLAVLPDAAFQGLAS 266
Query: 362 LHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLT 541
L L L N+L L P L G +L L L N L+ ++ PKL+ L+L++N +
Sbjct: 267 LRELVLAGNKLAYLQPPLFCGLGELRELDLSRNALRSVKANVFVKLPKLQKLYLDHNVIA 326
Query: 542 TLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASL 643
+A GAF G++ L LDLS+N + + E + L
Sbjct: 327 AVAPGAFLGMKALRWLDLSHNRVAGLLEDTFPGL 360
Score = 83.2 bits (204), Expect = 4e-16
Identities = 61/191 (31%), Positives = 89/191 (46%), Gaps = 1/191 (0%)
Frame = +2
Query: 65 IPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKEN 244
+P LQ+L+L +N + ++ L + L+ LDL+ N + L F LH L L N
Sbjct: 312 LPKLQKLYLDHNVIAAVAPGAFLGMKALRWLDLSHNRVAGLLEDTFPGLLGLHVLRLSHN 371
Query: 245 RLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRG 424
+ L R L L L L N++R LP K L +L L +NQ++ + G
Sbjct: 372 AIAGLRPRTFRDLHFLEELRLGHNRIRQLPDKAFEGLGQLEVLTLNDNQIREIEAGAFVG 431
Query: 425 PLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNN 604
L + ++L GN L+ L E +L L L L + AF GL L L L +N
Sbjct: 432 LLSVAVMNLSGNCLRSLPERTFQGLGRLHSLHLERGCLGRVRPHAFAGLSGLRRLFLKHN 491
Query: 605 SLTSVPE-GLW 634
+T+V E GLW
Sbjct: 492 GITAVDEQGLW 502
Score = 79.0 bits (193), Expect = 7e-15
Identities = 63/196 (32%), Positives = 91/196 (46%)
Frame = +2
Query: 62 GIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKE 241
G+ L+ L LS+N++ L + L VL L+ NA+ L P F+ L L L
Sbjct: 335 GMKALRWLDLSHNRVAGLLEDTFPGLLGLHVLRLSHNAIAGLRPRTFRDLHFLEELRLGH 394
Query: 242 NRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLR 421
NR+ L GL L L L+ NQ+R + + +++L N L++LP +
Sbjct: 395 NRIRQLPDKAFEGLGQLEVLTLNDNQIREIEAGAFVGLLSVAVMNLSGNCLRSLPERTFQ 454
Query: 422 GPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSN 601
G +L LHLE L + A LR LFL +N +T + GL L LDL+
Sbjct: 455 GLGRLHSLHLERGCLGRVRPHAFAGLSGLRRLFLKHNGITAVDEQGLWGLAELLELDLTA 514
Query: 602 NSLTSVPEGLWASLGK 649
N LT +P + LGK
Sbjct: 515 NRLTHLPARAFQGLGK 530
Score = 77.8 bits (190), Expect = 2e-14
Identities = 63/167 (37%), Positives = 78/167 (46%)
Frame = +2
Query: 149 KVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRT 328
+ L L N L +P F+ ++L L L+ + L L+ L GL+ LRHL L NQLR
Sbjct: 148 RALWLDGNNLFSIPEAAFQNLSSLGFLNLQGSGLASLEPRALLGLQQLRHLHLERNQLRG 207
Query: 329 LPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKL 508
L + L L L NN L + L RG L LHL N L VL + L
Sbjct: 208 LGAHTFLHTPGLASLGLSNNMLGRVDEGLFRGLADLWDLHLGWNGLAVLPDAAFQGLASL 267
Query: 509 RYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASLGK 649
R L L NKL L F GL L LDLS N+L SV ++ L K
Sbjct: 268 RELVLAGNKLAYLQPPLFCGLGELRELDLSRNALRSVKANVFVKLPK 314
>ref|XP_542026.2| PREDICTED: similar to Fibromodulin precursor (FM) (Collagen-binding
59 kDa protein) (Keratan sulfate proteoglycan
fibromodulin) (KSPG fibromodulin) [Canis familiaris].
Length = 593
Score = 100 bits (249), Expect = 2e-21
Identities = 79/200 (39%), Positives = 109/200 (54%), Gaps = 7/200 (3%)
Frame = +2
Query: 26 HHVLLEPRRKTEGIPNLQELHLSNNQLED--LSAKFLLPVPQLKVLDLTRNALKRLPPGL 199
+HV R G+ L EL+L+ N+L + + P+ L+ LDL N L RLP GL
Sbjct: 380 NHVTTLGARDLAGLRGLAELNLAYNRLVSARVHRRAFRPLRALRSLDLAGNQLTRLPGGL 439
Query: 200 FKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRT--LPRKLLANFTDLHIL 373
+L TL L+ N+L L+ L GL LR L L+ N+LR + L +L
Sbjct: 440 ---PGSLRTLRLQRNQLRALEPELLAGLDQLRELSLAHNRLRIGDIGPGTWHELQALQVL 496
Query: 374 DLGNNQLQTLPPDLLRGPLKLEWLHLEGNRL-QVLEEGFLAPQPKLRYLFLNNNKL--TT 544
DL +N+L +PPDL P LE LHL+GNR+ V E FL+ P+LR LFL N+L T+
Sbjct: 497 DLSHNELSFVPPDL---PEALEELHLQGNRIGHVGSEAFLS-TPRLRALFLRANRLHMTS 552
Query: 545 LAAGAFRGLQVLDMLDLSNN 604
+A AF GL L ++D + N
Sbjct: 553 IAPEAFLGLLHLRVVDTAGN 572
Score = 91.7 bits (226), Expect = 1e-18
Identities = 79/206 (38%), Positives = 102/206 (49%), Gaps = 6/206 (2%)
Frame = +2
Query: 44 PRRKTEGIPNLQELHLSNNQLED--LSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAA 217
PR +L+EL+L +NQL D L A + L+ LDL+ N L +P GL + A
Sbjct: 244 PRGALSRQTHLRELYLQHNQLTDSGLDATTFSKLRHLEYLDLSHNQLASVPAGLPRTLAV 303
Query: 218 LHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRT--LPRKLLANFTDLHILDLGNNQ 391
LH L NR+ ++A+ LRG + LR+L L NQL LP L LH L L N
Sbjct: 304 LH---LGRNRIRWVEAARLRGARGLRYLLLQHNQLGAEGLPAGALRPLRGLHTLHLYGNG 360
Query: 392 LQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAG--AFR 565
L +PP L P +L L L N + L LA L L L N+L + AFR
Sbjct: 361 LHRVPPAL---PRRLRALVLPHNHVTTLGARDLAGLRGLAELNLAYNRLVSARVHRRAFR 417
Query: 566 GLQVLDMLDLSNNSLTSVPEGLWASL 643
L+ L LDL+ N LT +P GL SL
Sbjct: 418 PLRALRSLDLAGNQLTRLPGGLPGSL 443
Score = 83.2 bits (204), Expect = 4e-16
Identities = 71/212 (33%), Positives = 97/212 (45%), Gaps = 27/212 (12%)
Frame = +2
Query: 77 QELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKR--LPPGLFKVSAALHTLVLKENRL 250
Q L L NNQL++L L + L+ L+L N + LP F+ L + + N+L
Sbjct: 89 QHLSLQNNQLQELPYNELSRLRSLRTLNLHNNLISSEGLPDEAFESLTQLQHIYVAHNKL 148
Query: 251 DILDASWLRGLK---------------------ALRHLDLSGNQLRT--LPRKLLANFTD 361
+ R L+ ALR + L NQL LP
Sbjct: 149 SVAPQFLPRSLRVADLAANQVTEIFPLTFGEKPALRSVYLHNNQLSNAGLPPDAFHGSEA 208
Query: 362 LHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLT 541
+ L L +N+L LPP L P LE LHL+ N + + G L+ Q LR L+L +N+LT
Sbjct: 209 VATLSLSSNRLSYLPPSL---PPSLERLHLQNNLISKVPRGALSRQTHLRELYLQHNQLT 265
Query: 542 T--LAAGAFRGLQVLDMLDLSNNSLTSVPEGL 631
L A F L+ L+ LDLS+N L SVP GL
Sbjct: 266 DSGLDATTFSKLRHLEYLDLSHNQLASVPAGL 297
Score = 54.3 bits (129), Expect = 2e-07
Identities = 41/145 (28%), Positives = 67/145 (46%), Gaps = 25/145 (17%)
Frame = +2
Query: 284 KALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQT--LPPDLLRGPLKLEWLHLEG 457
+A +HL L NQL+ LP L+ L L+L NN + + LP + +L+ +++
Sbjct: 86 RAAQHLSLQNNQLQELPYNELSRLRSLRTLNLHNNLISSEGLPDEAFESLTQLQHIYVAH 145
Query: 458 NRLQVLEEGF---------------------LAPQPKLRYLFLNNNKLTT--LAAGAFRG 568
N+L V + +P LR ++L+NN+L+ L AF G
Sbjct: 146 NKLSVAPQFLPRSLRVADLAANQVTEIFPLTFGEKPALRSVYLHNNQLSNAGLPPDAFHG 205
Query: 569 LQVLDMLDLSNNSLTSVPEGLWASL 643
+ + L LS+N L+ +P L SL
Sbjct: 206 SEAVATLSLSSNRLSYLPPSLPPSL 230
>ref|XP_852404.1| PREDICTED: similar to Chondroadherin precursor (Cartilage
leucine-rich protein) [Canis familiaris].
Length = 355
Score = 99.8 bits (247), Expect = 4e-21
Identities = 81/294 (27%), Positives = 122/294 (41%), Gaps = 46/294 (15%)
Frame = +2
Query: 65 IPNLQE----LHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLV 232
IP + E L+L N L+A +P L L L ++ + G F+ L L
Sbjct: 42 IPKVSEKTKLLNLQRNNFPVLAANSFRAMPNLVSLHLQHCQIREVAAGAFRGLKQLIYLY 101
Query: 233 LKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPD 412
L N + +L A L L +L L N++ LPR LL+ +L IL L NN+++ L
Sbjct: 102 LSHNDIRVLRAGAFDDLTELTYLYLDHNKVTELPRGLLSPLVNLFILQLNNNKIRELRAG 161
Query: 413 LLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLD 592
+G L WL+L N L L+ G L L +L+ N+L++ A A L+V++ L
Sbjct: 162 AFQGAKDLRWLYLSENALTSLQPGALDDVENLAKFYLDRNQLSSYPAAALSKLRVVEELK 221
Query: 593 LSNNSLTSVPEGLWASLGKAAGNM------------------------------------ 664
LS+N L S+P+ + S G+ +
Sbjct: 222 LSHNPLKSIPDNAFQSFGRYLETLWLDNTNLEKFSDGAFLGVTTLKHVHLENNRLNQLPS 281
Query: 665 KVGFD------ISGNPWICDQKLDDLYRWLVANEDKMFFQNNTHCAGPKALEGQ 808
FD ++ NPW C +L L RWL A + + CA P +GQ
Sbjct: 282 NFPFDSLETLTLTNNPWKCTCQLRGLRRWLEAKTSR----PDATCASPAKFKGQ 331
Score = 69.3 bits (168), Expect = 6e-12
Identities = 66/208 (31%), Positives = 87/208 (41%), Gaps = 3/208 (1%)
Frame = +2
Query: 44 PRRKTEGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALH 223
PR + NL L L+NN++ +L A L+ L L+ NAL L PG L
Sbjct: 135 PRGLLSPLVNLFILQLNNNKIRELRAGAFQGAKDLRWLYLSENALTSLQPGALDDVENLA 194
Query: 224 TLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANF-TDLHILDLGNNQLQT 400
L N+L A+ L L+ + L LS N L+++P +F L L L N L+
Sbjct: 195 KFYLDRNQLSSYPAAALSKLRVVEELKLSHNPLKSIPDNAFQSFGRYLETLWLDNTNLEK 254
Query: 401 LPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNN--KLTTLAAGAFRGLQ 574
G L+ +HLE NRL L F P L L L NN K T G R L+
Sbjct: 255 FSDGAFLGVTTLKHVHLENNRLNQLPSNF--PFDSLETLTLTNNPWKCTCQLRGLRRWLE 312
Query: 575 VLDMLDLSNNSLTSVPEGLWASLGKAAG 658
+ TS P+ AS K G
Sbjct: 313 ----------AKTSRPDATCASPAKFKG 330
>ref|XP_546127.2| PREDICTED: similar to Leucine-rich repeat transmembrane neuronal
protein 3 precursor isoform 1 [Canis familiaris].
Length = 581
Score = 99.4 bits (246), Expect = 5e-21
Identities = 75/281 (26%), Positives = 127/281 (45%), Gaps = 28/281 (9%)
Frame = +2
Query: 59 EGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLK 238
+G+ L L+L +N + ++ + +LK L L+ N + F+ L L L
Sbjct: 82 KGLNQLTWLYLDHNHISNIDENAFNGIRRLKELILSSNRISYFLNNTFRPVTNLRNLDLS 141
Query: 239 ENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLL 418
N+L L + RGL+ L L L N LRT+P ++ + +L +LDLG N++++L ++
Sbjct: 142 YNQLHSLGSEQFRGLRKLLSLHLRSNSLRTIPVRIFQDCRNLELLDLGYNRIRSLARNVF 201
Query: 419 RGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLA---AGAFRGLQVLDM- 586
G ++L+ LHLE N+ L L+ L+L NK++ + + + LQ LD+
Sbjct: 202 AGMIRLKELHLEHNQFSKLNLALFPRLVSLQNLYLQWNKISVIGQTMSWTWSSLQRLDLS 261
Query: 587 ---------------------LDLSNNSLTSVPEGL---WASLGKAAGNMKVGFDISGNP 694
L+L +N LT + + + W SL ++GN
Sbjct: 262 GNEIEAFSGPSVFQCVPNLQRLNLDSNKLTFIGQEILDSWISLN--------DISLAGNI 313
Query: 695 WICDQKLDDLYRWLVANEDKMFFQNNTHCAGPKALEGQTLL 817
W C + + L WL K +N CA PK L+G ++
Sbjct: 314 WECSRNICSLVNWL--KSFKGLRENTIICASPKELQGVNVM 352
Score = 69.3 bits (168), Expect = 6e-12
Identities = 50/163 (30%), Positives = 74/163 (45%)
Frame = +2
Query: 155 LDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLP 334
L L N+L++L FK L L L N + +D + G++ L+ L LS N++
Sbjct: 66 LSLRYNSLQKLKYNQFKGLNQLTWLYLDHNHISNIDENAFNGIRRLKELILSSNRISYFL 125
Query: 335 RKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRY 514
T+L LDL NQL +L + RG KL LHL N L+ + L
Sbjct: 126 NNTFRPVTNLRNLDLSYNQLHSLGSEQFRGLRKLLSLHLRSNSLRTIPVRIFQDCRNLEL 185
Query: 515 LFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASL 643
L L N++ +LA F G+ L L L +N + + L+ L
Sbjct: 186 LDLGYNRIRSLARNVFAGMIRLKELHLEHNQFSKLNLALFPRL 228
Score = 50.4 bits (119), Expect = 3e-06
Identities = 37/140 (26%), Positives = 66/140 (47%), Gaps = 1/140 (0%)
Frame = +2
Query: 44 PRRKTEGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALH 223
P R + NL+ L L N++ L+ + +LK L L N +L LF +L
Sbjct: 173 PVRIFQDCRNLELLDLGYNRIRSLARNVFAGMIRLKELHLEHNQFSKLNLALFPRLVSLQ 232
Query: 224 TLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLP-RKLLANFTDLHILDLGNNQLQT 400
L L+ N++ ++ + +L+ LDLSGN++ + +L L+L +N+L
Sbjct: 233 NLYLQWNKISVIGQTMSWTWSSLQRLDLSGNEIEAFSGPSVFQCVPNLQRLNLDSNKLTF 292
Query: 401 LPPDLLRGPLKLEWLHLEGN 460
+ ++L + L + L GN
Sbjct: 293 IGQEILDSWISLNDISLAGN 312
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 45,746,965
Number of extensions: 1427188
Number of successful extensions: 9449
Number of sequences better than 1.0e-05: 152
Number of HSP's gapped: 8144
Number of HSP's successfully gapped: 466
Length of query: 352
Length of database: 18,874,504
Length adjustment: 104
Effective length of query: 248
Effective length of database: 15,407,560
Effective search space: 3821074880
Effective search space used: 3821074880
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-001977
(1058 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_443204.1| leucine-rich alpha-2-glycoprotein precursor [Ho... 375 e-104
Alignment gi|NP_001073982.2| carboxypeptidase N subunit 2 [Homo sapiens]. 125 7e-29
Alignment gi|NP_570843.2| leucine-rich repeat-containing protein 15 isofo... 116 3e-26
Alignment gi|NP_001128529.2| leucine-rich repeat-containing protein 15 is... 116 3e-26
Alignment gi|NP_612490.1| chondroadherin-like protein precursor [Homo sap... 113 3e-25
Alignment gi|NP_000164.5| platelet glycoprotein Ib alpha chain precursor ... 110 3e-24
Alignment gi|NP_079269.4| leucine-rich repeat transmembrane neuronal prot... 106 4e-23
Alignment gi|NP_001128217.1| leucine-rich repeat transmembrane neuronal p... 106 4e-23
Alignment gi|NP_001139478.1| insulin-like growth factor-binding protein c... 100 2e-21
Alignment gi|NP_004961.1| insulin-like growth factor-binding protein comp... 100 2e-21
>ref|NP_443204.1| leucine-rich alpha-2-glycoprotein precursor [Homo sapiens].
Length = 347
Score = 375 bits (963), Expect = e-104
Identities = 190/263 (72%), Positives = 215/263 (81%)
Frame = +2
Query: 44 PRRKTEGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALH 223
P +G LQELHLS+N LE LS +FL PVPQL+VLDLTRNAL LPPGLF+ SA L
Sbjct: 84 PANLLQGASKLQELHLSSNGLESLSPEFLRPVPQLRVLDLTRNALTGLPPGLFQASATLD 143
Query: 224 TLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTL 403
TLVLKEN+L++L+ SWL GLKAL HLDLSGN+LR LP LLANFT L LDLG NQL+TL
Sbjct: 144 TLVLKENQLEVLEVSWLHGLKALGHLDLSGNRLRKLPPGLLANFTLLRTLDLGENQLETL 203
Query: 404 PPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLD 583
PPDLLRGPL+LE LHLEGN+LQVL + L PQP LRYLFLN NKL +AAGAF+GL+ LD
Sbjct: 204 PPDLLRGPLQLERLHLEGNKLQVLGKDLLLPQPDLRYLFLNGNKLARVAAGAFQGLRQLD 263
Query: 584 MLDLSNNSLTSVPEGLWASLGKAAGNMKVGFDISGNPWICDQKLDDLYRWLVANEDKMFF 763
MLDLSNNSL SVPEGLWASLG+ +M+ GFDISGNPWICDQ L DLYRWL A +DKMF
Sbjct: 264 MLDLSNNSLASVPEGLWASLGQPNWDMRDGFDISGNPWICDQNLSDLYRWLQAQKDKMFS 323
Query: 764 QNNTHCAGPKALEGQTLLAVAAS 832
QN+T CAGP+A++GQTLLAVA S
Sbjct: 324 QNDTRCAGPEAVKGQTLLAVAKS 346
Score = 72.0 bits (175), Expect = 9e-13
Identities = 46/125 (36%), Positives = 64/125 (51%)
Frame = +2
Query: 257 LDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKL 436
L A+ L+G L+ L LS N L +L + L L +LDL N L LPP L + L
Sbjct: 83 LPANLLQGASKLQELHLSSNGLESLSPEFLRPVPQLRVLDLTRNALTGLPPGLFQASATL 142
Query: 437 EWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTS 616
+ L L+ N+L+VLE +L L +L L+ N+L L G +L LDL N L +
Sbjct: 143 DTLVLKENQLEVLEVSWLHGLKALGHLDLSGNRLRKLPPGLLANFTLLRTLDLGENQLET 202
Query: 617 VPEGL 631
+P L
Sbjct: 203 LPPDL 207
Score = 60.5 bits (145), Expect = 3e-09
Identities = 42/115 (36%), Positives = 53/115 (46%)
Frame = +2
Query: 296 HLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVL 475
HL + L LP LL + L L L +N L++L P+ LR +L L L N L L
Sbjct: 72 HLAVEFFNLTHLPANLLQGASKLQELHLSSNGLESLSPEFLRPVPQLRVLDLTRNALTGL 131
Query: 476 EEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWAS 640
G L L L N+L L GL+ L LDLS N L +P GL A+
Sbjct: 132 PPGLFQASATLDTLVLKENQLEVLEVSWLHGLKALGHLDLSGNRLRKLPPGLLAN 186
>ref|NP_001073982.2| carboxypeptidase N subunit 2 [Homo sapiens].
Length = 545
Score = 125 bits (314), Expect = 7e-29
Identities = 92/287 (32%), Positives = 135/287 (47%), Gaps = 19/287 (6%)
Frame = +2
Query: 20 RGHHVLLEPRRKTEGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGL 199
+G+ + PRR + + +L+ L+L+ N L L + P+ L+ L L+ NAL LP G+
Sbjct: 153 QGNQLQALPRRLFQPLTHLKTLNLAQNLLAQLPEELFHPLTSLQTLKLSNNALSGLPQGV 212
Query: 200 FKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDL 379
F +L L L N + L L L L L N + LP + A+ +L L L
Sbjct: 213 FGKLGSLQELFLDSNNISELPPQVFSQLFCLERLWLQRNAITHLPLSIFASLGNLTFLSL 272
Query: 380 GNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGA 559
N L+ LP L L L L N+L+ + EG A LR L L+ N +T L AG
Sbjct: 273 QWNMLRVLPAGLFAHTPCLVGLSLTHNQLETVAEGTFAHLSNLRSLMLSYNAITHLPAGI 332
Query: 560 FRGLQVLDMLDLSNNSLTSVPEGLWASLGK--------------AAGNMKVGFD-----I 682
FR L+ L L L +N+LT++ L+ +L K G ++ +
Sbjct: 333 FRDLEELVKLYLGSNNLTALHPALFQNLSKLELLSLSKNQLTTLPEGIFDTNYNLFNLAL 392
Query: 683 SGNPWICDQKLDDLYRWLVANEDKMFFQNNTHCAGPKALEGQTLLAV 823
GNPW CD L L+ WL D++ T+CAGP L+GQ + A+
Sbjct: 393 HGNPWQCDCHLAYLFNWLQQYTDRL-LNIQTYCAGPAYLKGQVVPAL 438
Score = 98.6 bits (244), Expect = 9e-21
Identities = 65/193 (33%), Positives = 95/193 (49%)
Frame = +2
Query: 68 PNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENR 247
PNL ++ N QL +P+L+ L++T ++ L +F +L L L N
Sbjct: 73 PNLTKVVFLNTQLCQFRPDAFGGLPRLEDLEVTGSSFLNLSTNIFSNLTSLGKLTLNFNM 132
Query: 248 LDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGP 427
L+ L + L AL L L GNQL+ LPR+L T L L+L N L LP +L
Sbjct: 133 LEALPEGLFQHLAALESLHLQGNQLQALPRRLFQPLTHLKTLNLAQNLLAQLPEELFHPL 192
Query: 428 LKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNS 607
L+ L L N L L +G L+ LFL++N ++ L F L L+ L L N+
Sbjct: 193 TSLQTLKLSNNALSGLPQGVFGKLGSLQELFLDSNNISELPPQVFSQLFCLERLWLQRNA 252
Query: 608 LTSVPEGLWASLG 646
+T +P ++ASLG
Sbjct: 253 ITHLPLSIFASLG 265
>ref|NP_570843.2| leucine-rich repeat-containing protein 15 isoform b [Homo sapiens].
Length = 581
Score = 116 bits (291), Expect = 3e-26
Identities = 79/260 (30%), Positives = 117/260 (45%)
Frame = +2
Query: 44 PRRKTEGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALH 223
P +G+ NLQEL L NQ+ LS L+ L L+ N + +LPP +F L+
Sbjct: 213 PMGTFDGLVNLQELALQQNQIGLLSPGLFHNNHNLQRLYLSNNHISQLPPSVFMQLPQLN 272
Query: 224 TLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTL 403
L L N L L + LR L L N + +LP + +N L +L L NQ+ +
Sbjct: 273 RLTLFGNSLKELSPGIFGPMPNLRELWLYDNHISSLPDNVFSNLRQLQVLILSRNQISFI 332
Query: 404 PPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLD 583
P G +L L L N LQ L+ L+ + L NN+L L F + L
Sbjct: 333 SPGAFNGLTELRELSLHTNALQDLDGNVFRMLANLQNISLQNNRLRQLPGNIFANVNGLM 392
Query: 584 MLDLSNNSLTSVPEGLWASLGKAAGNMKVGFDISGNPWICDQKLDDLYRWLVANEDKMFF 763
+ L NN L ++P G++ LGK + NPW CD + L WL+ N+ ++
Sbjct: 393 AIQLQNNQLENLPLGIFDHLGKLC-----ELRLYDNPWRCDSDILPLRNWLLLNQPRLGT 447
Query: 764 QNNTHCAGPKALEGQTLLAV 823
C P + GQ+L+ +
Sbjct: 448 DTVPVCFSPANVRGQSLIII 467
Score = 92.8 bits (229), Expect = 5e-19
Identities = 65/191 (34%), Positives = 93/191 (48%)
Frame = +2
Query: 71 NLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRL 250
NL+EL L N LE + + L L+L +N+L + P +F+ L L L ENRL
Sbjct: 150 NLKELQLHGNHLEYIPDGAFDHLVGLTKLNLGKNSLTHISPRVFQHLGNLQVLRLYENRL 209
Query: 251 DILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPL 430
+ GL L+ L L NQ+ L L N +L L L NN + LPP +
Sbjct: 210 TDIPMGTFDGLVNLQELALQQNQIGLLSPGLFHNNHNLQRLYLSNNHISQLPPSVFMQLP 269
Query: 431 KLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSL 610
+L L L GN L+ L G P P LR L+L +N +++L F L+ L +L LS N +
Sbjct: 270 QLNRLTLFGNSLKELSPGIFGPMPNLRELWLYDNHISSLPDNVFSNLRQLQVLILSRNQI 329
Query: 611 TSVPEGLWASL 643
+ + G + L
Sbjct: 330 SFISPGAFNGL 340
Score = 75.9 bits (185), Expect = 6e-14
Identities = 55/188 (29%), Positives = 84/188 (44%)
Frame = +2
Query: 71 NLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRL 250
N L + N + +L+ L + L L + +N L R+ PG F+ +L L L N+L
Sbjct: 54 NAMSLQILNTHITELNESPFLNISALIALRIEKNELSRITPGAFRNLGSLRYLSLANNKL 113
Query: 251 DILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPL 430
+L +GL +L L LS NQL + + ++L L L N L+ +P +
Sbjct: 114 QVLPIGLFQGLDSLESLLLSSNQLLQIQPAHFSQCSNLKELQLHGNHLEYIPDGAFDHLV 173
Query: 431 KLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSL 610
L L+L N L + L+ L L N+LT + G F GL L L L N +
Sbjct: 174 GLTKLNLGKNSLTHISPRVFQHLGNLQVLRLYENRLTDIPMGTFDGLVNLQELALQQNQI 233
Query: 611 TSVPEGLW 634
+ GL+
Sbjct: 234 GLLSPGLF 241
Score = 75.9 bits (185), Expect = 6e-14
Identities = 56/193 (29%), Positives = 88/193 (45%)
Frame = +2
Query: 65 IPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKEN 244
I L L + N+L ++ + L+ L L N L+ LP GLF+ +L +L+L N
Sbjct: 76 ISALIALRIEKNELSRITPGAFRNLGSLRYLSLANNKLQVLPIGLFQGLDSLESLLLSSN 135
Query: 245 RLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRG 424
+L + + L+ L L GN L +P + L L+LG N L + P + +
Sbjct: 136 QLLQIQPAHFSQCSNLKELQLHGNHLEYIPDGAFDHLVGLTKLNLGKNSLTHISPRVFQH 195
Query: 425 PLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNN 604
L+ L L NRL + G L+ L L N++ L+ G F L L LSNN
Sbjct: 196 LGNLQVLRLYENRLTDIPMGTFDGLVNLQELALQQNQIGLLSPGLFHNNHNLQRLYLSNN 255
Query: 605 SLTSVPEGLWASL 643
++ +P ++ L
Sbjct: 256 HISQLPPSVFMQL 268
Score = 75.5 bits (184), Expect = 8e-14
Identities = 53/191 (27%), Positives = 91/191 (47%)
Frame = +2
Query: 71 NLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRL 250
+L+ L L+NN+L+ L + L+ L L+ N L ++ P F + L L L N L
Sbjct: 102 SLRYLSLANNKLQVLPIGLFQGLDSLESLLLSSNQLLQIQPAHFSQCSNLKELQLHGNHL 161
Query: 251 DILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPL 430
+ + L L L+L N L + ++ + +L +L L N+L +P G +
Sbjct: 162 EYIPDGAFDHLVGLTKLNLGKNSLTHISPRVFQHLGNLQVLRLYENRLTDIPMGTFDGLV 221
Query: 431 KLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSL 610
L+ L L+ N++ +L G L+ L+L+NN ++ L F L L+ L L NSL
Sbjct: 222 NLQELALQQNQIGLLSPGLFHNNHNLQRLYLSNNHISQLPPSVFMQLPQLNRLTLFGNSL 281
Query: 611 TSVPEGLWASL 643
+ G++ +
Sbjct: 282 KELSPGIFGPM 292
Score = 59.7 bits (143), Expect = 4e-09
Identities = 44/141 (31%), Positives = 65/141 (46%)
Frame = +2
Query: 224 TLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTL 403
+L + + L+ S + AL L + N+L + N L L L NN+LQ L
Sbjct: 57 SLQILNTHITELNESPFLNISALIALRIEKNELSRITPGAFRNLGSLRYLSLANNKLQVL 116
Query: 404 PPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLD 583
P L +G LE L L N+L ++ + L+ L L+ N L + GAF L L
Sbjct: 117 PIGLFQGLDSLESLLLSSNQLLQIQPAHFSQCSNLKELQLHGNHLEYIPDGAFDHLVGLT 176
Query: 584 MLDLSNNSLTSVPEGLWASLG 646
L+L NSLT + ++ LG
Sbjct: 177 KLNLGKNSLTHISPRVFQHLG 197
>ref|NP_001128529.2| leucine-rich repeat-containing protein 15 isoform a [Homo sapiens].
Length = 587
Score = 116 bits (291), Expect = 3e-26
Identities = 79/260 (30%), Positives = 117/260 (45%)
Frame = +2
Query: 44 PRRKTEGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALH 223
P +G+ NLQEL L NQ+ LS L+ L L+ N + +LPP +F L+
Sbjct: 219 PMGTFDGLVNLQELALQQNQIGLLSPGLFHNNHNLQRLYLSNNHISQLPPSVFMQLPQLN 278
Query: 224 TLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTL 403
L L N L L + LR L L N + +LP + +N L +L L NQ+ +
Sbjct: 279 RLTLFGNSLKELSPGIFGPMPNLRELWLYDNHISSLPDNVFSNLRQLQVLILSRNQISFI 338
Query: 404 PPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLD 583
P G +L L L N LQ L+ L+ + L NN+L L F + L
Sbjct: 339 SPGAFNGLTELRELSLHTNALQDLDGNVFRMLANLQNISLQNNRLRQLPGNIFANVNGLM 398
Query: 584 MLDLSNNSLTSVPEGLWASLGKAAGNMKVGFDISGNPWICDQKLDDLYRWLVANEDKMFF 763
+ L NN L ++P G++ LGK + NPW CD + L WL+ N+ ++
Sbjct: 399 AIQLQNNQLENLPLGIFDHLGKLC-----ELRLYDNPWRCDSDILPLRNWLLLNQPRLGT 453
Query: 764 QNNTHCAGPKALEGQTLLAV 823
C P + GQ+L+ +
Sbjct: 454 DTVPVCFSPANVRGQSLIII 473
Score = 92.8 bits (229), Expect = 5e-19
Identities = 65/191 (34%), Positives = 93/191 (48%)
Frame = +2
Query: 71 NLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRL 250
NL+EL L N LE + + L L+L +N+L + P +F+ L L L ENRL
Sbjct: 156 NLKELQLHGNHLEYIPDGAFDHLVGLTKLNLGKNSLTHISPRVFQHLGNLQVLRLYENRL 215
Query: 251 DILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPL 430
+ GL L+ L L NQ+ L L N +L L L NN + LPP +
Sbjct: 216 TDIPMGTFDGLVNLQELALQQNQIGLLSPGLFHNNHNLQRLYLSNNHISQLPPSVFMQLP 275
Query: 431 KLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSL 610
+L L L GN L+ L G P P LR L+L +N +++L F L+ L +L LS N +
Sbjct: 276 QLNRLTLFGNSLKELSPGIFGPMPNLRELWLYDNHISSLPDNVFSNLRQLQVLILSRNQI 335
Query: 611 TSVPEGLWASL 643
+ + G + L
Sbjct: 336 SFISPGAFNGL 346
Score = 75.9 bits (185), Expect = 6e-14
Identities = 55/188 (29%), Positives = 84/188 (44%)
Frame = +2
Query: 71 NLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRL 250
N L + N + +L+ L + L L + +N L R+ PG F+ +L L L N+L
Sbjct: 60 NAMSLQILNTHITELNESPFLNISALIALRIEKNELSRITPGAFRNLGSLRYLSLANNKL 119
Query: 251 DILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPL 430
+L +GL +L L LS NQL + + ++L L L N L+ +P +
Sbjct: 120 QVLPIGLFQGLDSLESLLLSSNQLLQIQPAHFSQCSNLKELQLHGNHLEYIPDGAFDHLV 179
Query: 431 KLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSL 610
L L+L N L + L+ L L N+LT + G F GL L L L N +
Sbjct: 180 GLTKLNLGKNSLTHISPRVFQHLGNLQVLRLYENRLTDIPMGTFDGLVNLQELALQQNQI 239
Query: 611 TSVPEGLW 634
+ GL+
Sbjct: 240 GLLSPGLF 247
Score = 75.9 bits (185), Expect = 6e-14
Identities = 56/193 (29%), Positives = 88/193 (45%)
Frame = +2
Query: 65 IPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKEN 244
I L L + N+L ++ + L+ L L N L+ LP GLF+ +L +L+L N
Sbjct: 82 ISALIALRIEKNELSRITPGAFRNLGSLRYLSLANNKLQVLPIGLFQGLDSLESLLLSSN 141
Query: 245 RLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRG 424
+L + + L+ L L GN L +P + L L+LG N L + P + +
Sbjct: 142 QLLQIQPAHFSQCSNLKELQLHGNHLEYIPDGAFDHLVGLTKLNLGKNSLTHISPRVFQH 201
Query: 425 PLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNN 604
L+ L L NRL + G L+ L L N++ L+ G F L L LSNN
Sbjct: 202 LGNLQVLRLYENRLTDIPMGTFDGLVNLQELALQQNQIGLLSPGLFHNNHNLQRLYLSNN 261
Query: 605 SLTSVPEGLWASL 643
++ +P ++ L
Sbjct: 262 HISQLPPSVFMQL 274
Score = 75.5 bits (184), Expect = 8e-14
Identities = 53/191 (27%), Positives = 91/191 (47%)
Frame = +2
Query: 71 NLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRL 250
+L+ L L+NN+L+ L + L+ L L+ N L ++ P F + L L L N L
Sbjct: 108 SLRYLSLANNKLQVLPIGLFQGLDSLESLLLSSNQLLQIQPAHFSQCSNLKELQLHGNHL 167
Query: 251 DILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPL 430
+ + L L L+L N L + ++ + +L +L L N+L +P G +
Sbjct: 168 EYIPDGAFDHLVGLTKLNLGKNSLTHISPRVFQHLGNLQVLRLYENRLTDIPMGTFDGLV 227
Query: 431 KLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSL 610
L+ L L+ N++ +L G L+ L+L+NN ++ L F L L+ L L NSL
Sbjct: 228 NLQELALQQNQIGLLSPGLFHNNHNLQRLYLSNNHISQLPPSVFMQLPQLNRLTLFGNSL 287
Query: 611 TSVPEGLWASL 643
+ G++ +
Sbjct: 288 KELSPGIFGPM 298
Score = 59.7 bits (143), Expect = 4e-09
Identities = 44/141 (31%), Positives = 65/141 (46%)
Frame = +2
Query: 224 TLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTL 403
+L + + L+ S + AL L + N+L + N L L L NN+LQ L
Sbjct: 63 SLQILNTHITELNESPFLNISALIALRIEKNELSRITPGAFRNLGSLRYLSLANNKLQVL 122
Query: 404 PPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLD 583
P L +G LE L L N+L ++ + L+ L L+ N L + GAF L L
Sbjct: 123 PIGLFQGLDSLESLLLSSNQLLQIQPAHFSQCSNLKELQLHGNHLEYIPDGAFDHLVGLT 182
Query: 584 MLDLSNNSLTSVPEGLWASLG 646
L+L NSLT + ++ LG
Sbjct: 183 KLNLGKNSLTHISPRVFQHLG 203
>ref|NP_612490.1| chondroadherin-like protein precursor [Homo sapiens].
Length = 762
Score = 113 bits (282), Expect = 3e-25
Identities = 91/261 (34%), Positives = 129/261 (49%), Gaps = 2/261 (0%)
Frame = +2
Query: 62 GIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKE 241
G+ L L+LS+NQL LSA L P+L L L RN ++P + +L +L L++
Sbjct: 471 GLGRLIYLYLSDNQLAGLSAAALEGAPRLGYLYLERNRFLQVPGAALRALPSLFSLHLQD 530
Query: 242 NRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLR 421
N +D L L +ALR + LSGN++ + L +L L L NQL+ +P L
Sbjct: 531 NAVDRLAPGDLGRTRALRWVYLSGNRITEVSLGALGPARELEKLHLDRNQLREVPTGALE 590
Query: 422 GPLKLEWLHLEGNRLQVLEEGFLAPQPK-LRYLFLNNNKLTTLAAGAFRGL-QVLDMLDL 595
G L L L GN L+ L +G P + L++LFLN++ L + GAF GL L L L
Sbjct: 591 GLPALLELQLSGNPLRALRDGAFQPVGRSLQHLFLNSSGLEQICPGAFSGLGPGLQSLHL 650
Query: 596 SNNSLTSVPEGLWASLGKAAGNMKVGFDISGNPWICDQKLDDLYRWLVANEDKMFFQNNT 775
N L ++P SL + D+S NP+ CD +L L+RWL + +
Sbjct: 651 QKNQLRALP--ALPSLSQLE-----LIDLSSNPFHCDCQLLPLHRWLTG----LNLRVGA 699
Query: 776 HCAGPKALEGQTLLAVAASLE 838
CA P GQ + A AA E
Sbjct: 700 TCATPPNARGQRVKAAAAVFE 720
Score = 97.1 bits (240), Expect = 2e-20
Identities = 84/254 (33%), Positives = 115/254 (45%)
Frame = +2
Query: 62 GIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKE 241
G+ L L+L++N L +L + L + L+ L+L NAL+ L PG F AL TL L
Sbjct: 108 GLGRLLLLNLASNHLRELPQEALDGLGSLRRLELEGNALEELRPGTFGALGALATLNLAH 167
Query: 242 NRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLR 421
N L L A +GL +R L LS N L L + LA L L L +N+LQ LP +L
Sbjct: 168 NALVYLPAMAFQGLLRVRWLRLSHNALSVLAPEALAGLPALRRLSLHHNELQALPGPVLS 227
Query: 422 GPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSN 601
L L L N L E P LR L L+ L L AF L LDL
Sbjct: 228 QARGLARLELGHNPLTYAGEEDGLALPGLRELLLDGGALQALGPRAFAHCPRLHTLDLRG 287
Query: 602 NSLTSVPEGLWASLGKAAGNMKVGFDISGNPWICDQKLDDLYRWLVANEDKMFFQNNTHC 781
N L ++P + G ++ + GNP C + L WL + +++ C
Sbjct: 288 NQLDTLPP------LQGPGQLR-RLRLQGNPLWCGCQARPLLEWLA----RARVRSDGAC 336
Query: 782 AGPKALEGQTLLAV 823
GP+ L G+ L A+
Sbjct: 337 QGPRRLRGEALDAL 350
Score = 70.1 bits (170), Expect = 3e-12
Identities = 54/163 (33%), Positives = 80/163 (49%), Gaps = 1/163 (0%)
Frame = +2
Query: 137 VPQL-KVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSG 313
+P+L + LDL N LK +P F+ L L L+ ++++ RGL L L+L+
Sbjct: 60 IPELTQRLDLQGNLLKVIPAAAFQGVPHLTHLDLRHCEVELVAEGAFRGLGRLLLLNLAS 119
Query: 314 NQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLA 493
N LR LP++ L L L+L N L+ L P L L+L N L L
Sbjct: 120 NHLRELPQEALDGLGSLRRLELEGNALEELRPGTFGALGALATLNLAHNALVYLPAMAFQ 179
Query: 494 PQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVP 622
++R+L L++N L+ LA A GL L L L +N L ++P
Sbjct: 180 GLLRVRWLRLSHNALSVLAPEALAGLPALRRLSLHHNELQALP 222
>ref|NP_000164.5| platelet glycoprotein Ib alpha chain precursor [Homo sapiens].
Length = 652
Score = 110 bits (274), Expect = 3e-24
Identities = 81/226 (35%), Positives = 113/226 (50%)
Frame = +2
Query: 83 LHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILD 262
LHLS N L S L+P +L L+L R L +L +D
Sbjct: 52 LHLSENLLYTFSLATLMPYTRLTQLNLDRCELTKLQ----------------------VD 89
Query: 263 ASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEW 442
+ L L LDLS NQL++LP L L +LD+ N+L +LP LRG +L+
Sbjct: 90 GT----LPVLGTLDLSHNQLQSLPL-LGQTLPALTVLDVSFNRLTSLPLGALRGLGELQE 144
Query: 443 LHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVP 622
L+L+GN L+ L G L P PKL L L NN LT L AG GL+ LD L L NSL ++P
Sbjct: 145 LYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLYTIP 204
Query: 623 EGLWASLGKAAGNMKVGFDISGNPWICDQKLDDLYRWLVANEDKMF 760
+G + S ++ + GNPW+C+ ++ RWL N + ++
Sbjct: 205 KGFFGS------HLLPFAFLHGNPWLCNCEILYFRRWLQDNAENVY 244
Score = 52.0 bits (123), Expect = 9e-07
Identities = 29/69 (42%), Positives = 37/69 (53%)
Frame = +2
Query: 44 PRRKTEGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALH 223
P G+ LQEL+L N+L+ L L P P+L+ L L N L LP GL L
Sbjct: 132 PLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLD 191
Query: 224 TLVLKENRL 250
TL+L+EN L
Sbjct: 192 TLLLQENSL 200
>ref|NP_079269.4| leucine-rich repeat transmembrane neuronal protein 4 isoform b
[Homo sapiens].
Length = 518
Score = 106 bits (264), Expect = 4e-23
Identities = 78/253 (30%), Positives = 120/253 (47%), Gaps = 3/253 (1%)
Frame = +2
Query: 59 EGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLK 238
+GI L+EL LS+N++ L K PVP L+ LDL+ N L+ L FK L L L+
Sbjct: 106 QGIRRLKELILSSNKITYLHNKTFHPVPNLRNLDLSYNKLQTLQSEQFKGLRKLIILHLR 165
Query: 239 ENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLL 418
N L + + + L LDL N+LR+L R A L L L +NQ +
Sbjct: 166 SNSLKTVPIRVFQDCRNLDFLDLGYNRLRSLSRNAFAGLLKLKELHLEHNQFSKINFAHF 225
Query: 419 RGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLS 598
L ++L+ NR++ + +G L L L+ N + + G F+ L L L+L
Sbjct: 226 PRLFNLRSIYLQWNRIRSISQGLTWTWSSLHNLDLSGNDIQGIEPGTFKCLPNLQKLNLD 285
Query: 599 NNSLTSVPE---GLWASLGKAAGNMKVGFDISGNPWICDQKLDDLYRWLVANEDKMFFQN 769
+N LT++ + W SL + +SGN W C + + L+ WL K ++
Sbjct: 286 SNKLTNISQETVNAWISL--------ISITLSGNMWECSRSICPLFYWL--KNFKGNKES 335
Query: 770 NTHCAGPKALEGQ 808
CAGPK ++G+
Sbjct: 336 TMICAGPKHIQGE 348
>ref|NP_001128217.1| leucine-rich repeat transmembrane neuronal protein 4 isoform a
[Homo sapiens].
Length = 590
Score = 106 bits (264), Expect = 4e-23
Identities = 78/253 (30%), Positives = 120/253 (47%), Gaps = 3/253 (1%)
Frame = +2
Query: 59 EGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLK 238
+GI L+EL LS+N++ L K PVP L+ LDL+ N L+ L FK L L L+
Sbjct: 106 QGIRRLKELILSSNKITYLHNKTFHPVPNLRNLDLSYNKLQTLQSEQFKGLRKLIILHLR 165
Query: 239 ENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLL 418
N L + + + L LDL N+LR+L R A L L L +NQ +
Sbjct: 166 SNSLKTVPIRVFQDCRNLDFLDLGYNRLRSLSRNAFAGLLKLKELHLEHNQFSKINFAHF 225
Query: 419 RGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLS 598
L ++L+ NR++ + +G L L L+ N + + G F+ L L L+L
Sbjct: 226 PRLFNLRSIYLQWNRIRSISQGLTWTWSSLHNLDLSGNDIQGIEPGTFKCLPNLQKLNLD 285
Query: 599 NNSLTSVPE---GLWASLGKAAGNMKVGFDISGNPWICDQKLDDLYRWLVANEDKMFFQN 769
+N LT++ + W SL + +SGN W C + + L+ WL K ++
Sbjct: 286 SNKLTNISQETVNAWISL--------ISITLSGNMWECSRSICPLFYWL--KNFKGNKES 335
Query: 770 NTHCAGPKALEGQ 808
CAGPK ++G+
Sbjct: 336 TMICAGPKHIQGE 348
>ref|NP_001139478.1| insulin-like growth factor-binding protein complex acid labile
subunit isoform 1 precursor [Homo sapiens].
Length = 643
Score = 100 bits (250), Expect = 2e-21
Identities = 72/214 (33%), Positives = 103/214 (48%)
Frame = +2
Query: 2 WLDGKGRGHHVLLEPRRKTEGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALK 181
WLDG +++ P + + +L L+L QL L + LL + L L L RN L+
Sbjct: 118 WLDG----NNLSSVPPAAFQNLSSLGFLNLQGGQLGSLEPQALLGLENLCHLHLERNQLR 173
Query: 182 RLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTD 361
L G F + AL +L L NRL L+ GL +L L+L N L LP
Sbjct: 174 SLALGTFAHTPALASLGLSNNRLSRLEDGLFEGLGSLWDLNLGWNSLAVLPDAAFRGLGS 233
Query: 362 LHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLT 541
L L L N+L L P L G +L L L N L+ ++ P+L+ L+L+ N +
Sbjct: 234 LRELVLAGNRLAYLQPALFSGLAELRELDLSRNALRAIKANVFVQLPRLQKLYLDRNLIA 293
Query: 542 TLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASL 643
+A GAF GL+ L LDLS+N + + E + L
Sbjct: 294 AVAPGAFLGLKALRWLDLSHNRVAGLLEDTFPGL 327
Score = 100 bits (250), Expect = 2e-21
Identities = 88/288 (30%), Positives = 127/288 (44%), Gaps = 24/288 (8%)
Frame = +2
Query: 23 GHHVLLE-PRRKTEGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGL 199
GH+ + + R EG+ L+ L L +NQL+++ A L + + V++L+ N L+ LP +
Sbjct: 360 GHNRIRQLAERSFEGLGQLEVLTLDHNQLQEVKAGAFLGLTNVAVMNLSGNCLRNLPEQV 419
Query: 200 FKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDL 379
F+ LH+L L+ + L + GL LR L L N L + + L +L LDL
Sbjct: 420 FRGLGKLHSLHLEGSCLGRIRPHTFTGLSGLRRLFLKDNGLVGIEEQSLWGLAELLELDL 479
Query: 380 GNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGA 559
+NQL LP L +G KLE+L L NRL L L P + +L +++N+L L
Sbjct: 480 TSNQLTHLPHRLFQGLGKLEYLLLSRNRLAELPADALGPLQRAFWLDVSHNRLEALPNSL 539
Query: 560 FRGLQVLDMLDLSNNSL---TSVPEG---LWASLGKAAGNMKVGFDISGNPWICDQKLDD 721
L L L L NNSL T P G LW + GNPW C L
Sbjct: 540 LAPLGRLRYLSLRNNSLRTFTPQPPGLERLW---------------LEGNPWDCGCPLKA 584
Query: 722 LYRWLVAN-----------------EDKMFFQNNTHCAGPKALEGQTL 814
L + + N + + NN CA P + G L
Sbjct: 585 LRDFALQNPSAVPRFVQAICEGDDCQPPAYTYNNITCASPPEVVGLDL 632
Score = 99.8 bits (247), Expect = 4e-21
Identities = 68/202 (33%), Positives = 104/202 (51%)
Frame = +2
Query: 44 PRRKTEGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALH 223
P G+ +L+EL L+ N+L L + +L+ LDL+RNAL+ + +F L
Sbjct: 224 PDAAFRGLGSLRELVLAGNRLAYLQPALFSGLAELRELDLSRNALRAIKANVFVQLPRLQ 283
Query: 224 TLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTL 403
L L N + + GLKALR LDLS N++ L L +L L +N + +L
Sbjct: 284 KLYLDRNLIAAVAPGAFLGLKALRWLDLSHNRVAGLLEDTFPGLLGLRVLRLSHNAIASL 343
Query: 404 PPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLD 583
P + LE L L NR++ L E +L L L++N+L + AGAF GL +
Sbjct: 344 RPRTFKDLHFLEELQLGHNRIRQLAERSFEGLGQLEVLTLDHNQLQEVKAGAFLGLTNVA 403
Query: 584 MLDLSNNSLTSVPEGLWASLGK 649
+++LS N L ++PE ++ LGK
Sbjct: 404 VMNLSGNCLRNLPEQVFRGLGK 425
Score = 97.8 bits (242), Expect = 1e-20
Identities = 68/194 (35%), Positives = 101/194 (52%)
Frame = +2
Query: 38 LEPRRKTEGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAA 217
LEP+ G+ NL LHL NQL L+ P L L L+ N L RL GLF+ +
Sbjct: 151 LEPQALL-GLENLCHLHLERNQLRSLALGTFAHTPALASLGLSNNRLSRLEDGLFEGLGS 209
Query: 218 LHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQ 397
L L L N L +L + RGL +LR L L+GN+L L L + +L LDL N L+
Sbjct: 210 LWDLNLGWNSLAVLPDAAFRGLGSLRELVLAGNRLAYLQPALFSGLAELRELDLSRNALR 269
Query: 398 TLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQV 577
+ ++ +L+ L+L+ N + + G LR+L L++N++ L F GL
Sbjct: 270 AIKANVFVQLPRLQKLYLDRNLIAAVAPGAFLGLKALRWLDLSHNRVAGLLEDTFPGLLG 329
Query: 578 LDMLDLSNNSLTSV 619
L +L LS+N++ S+
Sbjct: 330 LRVLRLSHNAIASL 343
Score = 91.7 bits (226), Expect = 1e-18
Identities = 68/196 (34%), Positives = 96/196 (48%)
Frame = +2
Query: 62 GIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKE 241
G+ L+ L LS+N++ L + L+VL L+ NA+ L P FK L L L
Sbjct: 302 GLKALRWLDLSHNRVAGLLEDTFPGLLGLRVLRLSHNAIASLRPRTFKDLHFLEELQLGH 361
Query: 242 NRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLR 421
NR+ L GL L L L NQL+ + T++ +++L N L+ LP + R
Sbjct: 362 NRIRQLAERSFEGLGQLEVLTLDHNQLQEVKAGAFLGLTNVAVMNLSGNCLRNLPEQVFR 421
Query: 422 GPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSN 601
G KL LHLEG+ L + LR LFL +N L + + GL L LDL++
Sbjct: 422 GLGKLHSLHLEGSCLGRIRPHTFTGLSGLRRLFLKDNGLVGIEEQSLWGLAELLELDLTS 481
Query: 602 NSLTSVPEGLWASLGK 649
N LT +P L+ LGK
Sbjct: 482 NQLTHLPHRLFQGLGK 497
Score = 76.6 bits (187), Expect = 3e-14
Identities = 59/165 (35%), Positives = 79/165 (47%)
Frame = +2
Query: 149 KVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRT 328
+ L L N L +PP F+ ++L L L+ +L L+ L GL+ L HL L NQLR+
Sbjct: 115 QALWLDGNNLSSVPPAAFQNLSSLGFLNLQGGQLGSLEPQALLGLENLCHLHLERNQLRS 174
Query: 329 LPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKL 508
L A+ L L L NN+L L L G L L+L N L VL + L
Sbjct: 175 LALGTFAHTPALASLGLSNNRLSRLEDGLFEGLGSLWDLNLGWNSLAVLPDAAFRGLGSL 234
Query: 509 RYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASL 643
R L L N+L L F GL L LDLS N+L ++ ++ L
Sbjct: 235 RELVLAGNRLAYLQPALFSGLAELRELDLSRNALRAIKANVFVQL 279
Score = 70.9 bits (172), Expect = 2e-12
Identities = 46/114 (40%), Positives = 60/114 (52%)
Frame = +2
Query: 305 LSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEG 484
L GN L ++P N + L L+L QL +L P L G L LHLE N+L+ L G
Sbjct: 119 LDGNNLSSVPPAAFQNLSSLGFLNLQGGQLGSLEPQALLGLENLCHLHLERNQLRSLALG 178
Query: 485 FLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASLG 646
A P L L L+NN+L+ L G F GL L L+L NSL +P+ + LG
Sbjct: 179 TFAHTPALASLGLSNNRLSRLEDGLFEGLGSLWDLNLGWNSLAVLPDAAFRGLG 232
Score = 62.4 bits (150), Expect = 7e-10
Identities = 57/169 (33%), Positives = 75/169 (44%)
Frame = +2
Query: 143 QLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQL 322
+L V +RN L RLP G V L L N L + + + L +L L+L G QL
Sbjct: 93 ELSVFCSSRN-LTRLPDG---VPGGTQALWLDGNNLSSVPPAAFQNLSSLGFLNLQGGQL 148
Query: 323 RTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQP 502
+L + L +L L L NQL++L L L L NRL LE+G
Sbjct: 149 GSLEPQALLGLENLCHLHLERNQLRSLALGTFAHTPALASLGLSNNRLSRLEDGLFEGLG 208
Query: 503 KLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASLGK 649
L L L N L L AFRGL L L L+ N L + L++ L +
Sbjct: 209 SLWDLNLGWNSLAVLPDAAFRGLGSLRELVLAGNRLAYLQPALFSGLAE 257
>ref|NP_004961.1| insulin-like growth factor-binding protein complex acid labile
subunit isoform 2 precursor [Homo sapiens].
Length = 605
Score = 100 bits (250), Expect = 2e-21
Identities = 72/214 (33%), Positives = 103/214 (48%)
Frame = +2
Query: 2 WLDGKGRGHHVLLEPRRKTEGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALK 181
WLDG +++ P + + +L L+L QL L + LL + L L L RN L+
Sbjct: 80 WLDG----NNLSSVPPAAFQNLSSLGFLNLQGGQLGSLEPQALLGLENLCHLHLERNQLR 135
Query: 182 RLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTD 361
L G F + AL +L L NRL L+ GL +L L+L N L LP
Sbjct: 136 SLALGTFAHTPALASLGLSNNRLSRLEDGLFEGLGSLWDLNLGWNSLAVLPDAAFRGLGS 195
Query: 362 LHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLT 541
L L L N+L L P L G +L L L N L+ ++ P+L+ L+L+ N +
Sbjct: 196 LRELVLAGNRLAYLQPALFSGLAELRELDLSRNALRAIKANVFVQLPRLQKLYLDRNLIA 255
Query: 542 TLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASL 643
+A GAF GL+ L LDLS+N + + E + L
Sbjct: 256 AVAPGAFLGLKALRWLDLSHNRVAGLLEDTFPGL 289
Score = 100 bits (250), Expect = 2e-21
Identities = 88/288 (30%), Positives = 127/288 (44%), Gaps = 24/288 (8%)
Frame = +2
Query: 23 GHHVLLE-PRRKTEGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGL 199
GH+ + + R EG+ L+ L L +NQL+++ A L + + V++L+ N L+ LP +
Sbjct: 322 GHNRIRQLAERSFEGLGQLEVLTLDHNQLQEVKAGAFLGLTNVAVMNLSGNCLRNLPEQV 381
Query: 200 FKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDL 379
F+ LH+L L+ + L + GL LR L L N L + + L +L LDL
Sbjct: 382 FRGLGKLHSLHLEGSCLGRIRPHTFTGLSGLRRLFLKDNGLVGIEEQSLWGLAELLELDL 441
Query: 380 GNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGA 559
+NQL LP L +G KLE+L L NRL L L P + +L +++N+L L
Sbjct: 442 TSNQLTHLPHRLFQGLGKLEYLLLSRNRLAELPADALGPLQRAFWLDVSHNRLEALPNSL 501
Query: 560 FRGLQVLDMLDLSNNSL---TSVPEG---LWASLGKAAGNMKVGFDISGNPWICDQKLDD 721
L L L L NNSL T P G LW + GNPW C L
Sbjct: 502 LAPLGRLRYLSLRNNSLRTFTPQPPGLERLW---------------LEGNPWDCGCPLKA 546
Query: 722 LYRWLVAN-----------------EDKMFFQNNTHCAGPKALEGQTL 814
L + + N + + NN CA P + G L
Sbjct: 547 LRDFALQNPSAVPRFVQAICEGDDCQPPAYTYNNITCASPPEVVGLDL 594
Score = 99.8 bits (247), Expect = 4e-21
Identities = 68/202 (33%), Positives = 104/202 (51%)
Frame = +2
Query: 44 PRRKTEGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALH 223
P G+ +L+EL L+ N+L L + +L+ LDL+RNAL+ + +F L
Sbjct: 186 PDAAFRGLGSLRELVLAGNRLAYLQPALFSGLAELRELDLSRNALRAIKANVFVQLPRLQ 245
Query: 224 TLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTL 403
L L N + + GLKALR LDLS N++ L L +L L +N + +L
Sbjct: 246 KLYLDRNLIAAVAPGAFLGLKALRWLDLSHNRVAGLLEDTFPGLLGLRVLRLSHNAIASL 305
Query: 404 PPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLD 583
P + LE L L NR++ L E +L L L++N+L + AGAF GL +
Sbjct: 306 RPRTFKDLHFLEELQLGHNRIRQLAERSFEGLGQLEVLTLDHNQLQEVKAGAFLGLTNVA 365
Query: 584 MLDLSNNSLTSVPEGLWASLGK 649
+++LS N L ++PE ++ LGK
Sbjct: 366 VMNLSGNCLRNLPEQVFRGLGK 387
Score = 97.8 bits (242), Expect = 1e-20
Identities = 68/194 (35%), Positives = 101/194 (52%)
Frame = +2
Query: 38 LEPRRKTEGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAA 217
LEP+ G+ NL LHL NQL L+ P L L L+ N L RL GLF+ +
Sbjct: 113 LEPQALL-GLENLCHLHLERNQLRSLALGTFAHTPALASLGLSNNRLSRLEDGLFEGLGS 171
Query: 218 LHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQ 397
L L L N L +L + RGL +LR L L+GN+L L L + +L LDL N L+
Sbjct: 172 LWDLNLGWNSLAVLPDAAFRGLGSLRELVLAGNRLAYLQPALFSGLAELRELDLSRNALR 231
Query: 398 TLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQV 577
+ ++ +L+ L+L+ N + + G LR+L L++N++ L F GL
Sbjct: 232 AIKANVFVQLPRLQKLYLDRNLIAAVAPGAFLGLKALRWLDLSHNRVAGLLEDTFPGLLG 291
Query: 578 LDMLDLSNNSLTSV 619
L +L LS+N++ S+
Sbjct: 292 LRVLRLSHNAIASL 305
Score = 91.7 bits (226), Expect = 1e-18
Identities = 68/196 (34%), Positives = 96/196 (48%)
Frame = +2
Query: 62 GIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKE 241
G+ L+ L LS+N++ L + L+VL L+ NA+ L P FK L L L
Sbjct: 264 GLKALRWLDLSHNRVAGLLEDTFPGLLGLRVLRLSHNAIASLRPRTFKDLHFLEELQLGH 323
Query: 242 NRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLR 421
NR+ L GL L L L NQL+ + T++ +++L N L+ LP + R
Sbjct: 324 NRIRQLAERSFEGLGQLEVLTLDHNQLQEVKAGAFLGLTNVAVMNLSGNCLRNLPEQVFR 383
Query: 422 GPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSN 601
G KL LHLEG+ L + LR LFL +N L + + GL L LDL++
Sbjct: 384 GLGKLHSLHLEGSCLGRIRPHTFTGLSGLRRLFLKDNGLVGIEEQSLWGLAELLELDLTS 443
Query: 602 NSLTSVPEGLWASLGK 649
N LT +P L+ LGK
Sbjct: 444 NQLTHLPHRLFQGLGK 459
Score = 76.6 bits (187), Expect = 3e-14
Identities = 59/165 (35%), Positives = 79/165 (47%)
Frame = +2
Query: 149 KVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRT 328
+ L L N L +PP F+ ++L L L+ +L L+ L GL+ L HL L NQLR+
Sbjct: 77 QALWLDGNNLSSVPPAAFQNLSSLGFLNLQGGQLGSLEPQALLGLENLCHLHLERNQLRS 136
Query: 329 LPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKL 508
L A+ L L L NN+L L L G L L+L N L VL + L
Sbjct: 137 LALGTFAHTPALASLGLSNNRLSRLEDGLFEGLGSLWDLNLGWNSLAVLPDAAFRGLGSL 196
Query: 509 RYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASL 643
R L L N+L L F GL L LDLS N+L ++ ++ L
Sbjct: 197 RELVLAGNRLAYLQPALFSGLAELRELDLSRNALRAIKANVFVQL 241
Score = 70.9 bits (172), Expect = 2e-12
Identities = 46/114 (40%), Positives = 60/114 (52%)
Frame = +2
Query: 305 LSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEG 484
L GN L ++P N + L L+L QL +L P L G L LHLE N+L+ L G
Sbjct: 81 LDGNNLSSVPPAAFQNLSSLGFLNLQGGQLGSLEPQALLGLENLCHLHLERNQLRSLALG 140
Query: 485 FLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASLG 646
A P L L L+NN+L+ L G F GL L L+L NSL +P+ + LG
Sbjct: 141 TFAHTPALASLGLSNNRLSRLEDGLFEGLGSLWDLNLGWNSLAVLPDAAFRGLG 194
Score = 62.4 bits (150), Expect = 7e-10
Identities = 57/169 (33%), Positives = 75/169 (44%)
Frame = +2
Query: 143 QLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQL 322
+L V +RN L RLP G V L L N L + + + L +L L+L G QL
Sbjct: 55 ELSVFCSSRN-LTRLPDG---VPGGTQALWLDGNNLSSVPPAAFQNLSSLGFLNLQGGQL 110
Query: 323 RTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQP 502
+L + L +L L L NQL++L L L L NRL LE+G
Sbjct: 111 GSLEPQALLGLENLCHLHLERNQLRSLALGTFAHTPALASLGLSNNRLSRLEDGLFEGLG 170
Query: 503 KLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASLGK 649
L L L N L L AFRGL L L L+ N L + L++ L +
Sbjct: 171 SLWDLNLGWNSLAVLPDAAFRGLGSLRELVLAGNRLAYLQPALFSGLAE 219
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 44,869,547
Number of extensions: 1396180
Number of successful extensions: 9866
Number of sequences better than 1.0e-05: 203
Number of HSP's gapped: 8331
Number of HSP's successfully gapped: 638
Length of query: 352
Length of database: 18,297,164
Length adjustment: 104
Effective length of query: 248
Effective length of database: 14,868,908
Effective search space: 3687489184
Effective search space used: 3687489184
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-001977
(1058 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_084072.1| leucine-rich alpha-2-glycoprotein [Mus musculus]. 322 4e-88
Alignment gi|NP_083249.1| leucine-rich repeat-containing protein 15 precu... 119 5e-27
Alignment gi|NP_082180.2| carboxypeptidase N subunit 2 [Mus musculus]. 116 3e-26
Alignment gi|NP_032366.2| insulin-like growth factor-binding protein comp... 115 6e-26
Alignment gi|NP_848846.3| leucine-rich repeat transmembrane neuronal prot... 107 2e-23
Alignment gi|NP_032174.2| platelet glycoprotein V precursor [Mus musculus]. 106 3e-23
Alignment gi|NP_954693.1| reticulon-4 receptor-like 2 precursor [Mus musc... 101 1e-21
Alignment gi|NP_848793.1| leucine-rich repeat transmembrane neuronal prot... 99 7e-21
Alignment gi|NP_821072.1| leucine-rich repeat transmembrane neuronal prot... 98 1e-20
Alignment gi|NP_001157792.1| chondroadherin-like [Mus musculus]. 97 2e-20
>ref|NP_084072.1| leucine-rich alpha-2-glycoprotein [Mus musculus].
Length = 342
Score = 322 bits (824), Expect = 4e-88
Identities = 164/261 (62%), Positives = 200/261 (76%)
Frame = +2
Query: 44 PRRKTEGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALH 223
P +G P L+ELHLS+N+L+ LS + L PVP+L+ LDLTRNAL+ LPPGLF SA L
Sbjct: 77 PAAALQGCPGLRELHLSSNRLQALSPELLAPVPRLRALDLTRNALRSLPPGLFSTSANLS 136
Query: 224 TLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTL 403
TLVL+EN+L + A WL+GL AL HLDL+ NQL +LP LLA+ LH LDLG N L++L
Sbjct: 137 TLVLRENQLREVSAQWLQGLDALGHLDLAENQLSSLPSGLLASLGALHTLDLGYNLLESL 196
Query: 404 PPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLD 583
P LLRGP +L+ LHLEGNRLQ LE+ LAPQP LR LFLN+N+L +A G+F+GLQ LD
Sbjct: 197 PEGLLRGPRRLQRLHLEGNRLQRLEDSLLAPQPFLRVLFLNDNQLVGVATGSFQGLQHLD 256
Query: 584 MLDLSNNSLTSVPEGLWASLGKAAGNMKVGFDISGNPWICDQKLDDLYRWLVANEDKMFF 763
MLDLSNNSL+S P GLWA LG+ +M+ GFDIS NPWICD+ L DL RWLVAN +KMF
Sbjct: 257 MLDLSNNSLSSTPPGLWAFLGRPTRDMQDGFDISHNPWICDKNLADLCRWLVANRNKMFS 316
Query: 764 QNNTHCAGPKALEGQTLLAVA 826
QN+T CAGP+A++GQ LL VA
Sbjct: 317 QNDTRCAGPEAMKGQRLLDVA 337
Score = 76.6 bits (187), Expect = 3e-14
Identities = 52/135 (38%), Positives = 72/135 (53%)
Frame = +2
Query: 227 LVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLP 406
L ++ + L L A+ L+G LR L LS N+L+ L +LLA L LDL N L++LP
Sbjct: 66 LSVEFSNLTQLPAAALQGCPGLRELHLSSNRLQALSPELLAPVPRLRALDLTRNALRSLP 125
Query: 407 PDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDM 586
P L L L L N+L+ + +L L +L L N+L++L +G L L
Sbjct: 126 PGLFSTSANLSTLVLRENQLREVSAQWLQGLDALGHLDLAENQLSSLPSGLLASLGALHT 185
Query: 587 LDLSNNSLTSVPEGL 631
LDL N L S+PEGL
Sbjct: 186 LDLGYNLLESLPEGL 200
Score = 72.4 bits (176), Expect = 6e-13
Identities = 47/129 (36%), Positives = 67/129 (51%)
Frame = +2
Query: 296 HLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVL 475
HL + + L LP L L L L +N+LQ L P+LL +L L L N L+ L
Sbjct: 65 HLSVEFSNLTQLPAAALQGCPGLRELHLSSNRLQALSPELLAPVPRLRALDLTRNALRSL 124
Query: 476 EEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASLGKAA 655
G + L L L N+L ++A +GL L LDL+ N L+S+P GL ASLG A
Sbjct: 125 PPGLFSTSANLSTLVLRENQLREVSAQWLQGLDALGHLDLAENQLSSLPSGLLASLG-AL 183
Query: 656 GNMKVGFDI 682
+ +G+++
Sbjct: 184 HTLDLGYNL 192
>ref|NP_083249.1| leucine-rich repeat-containing protein 15 precursor [Mus musculus].
Length = 579
Score = 119 bits (297), Expect = 5e-27
Identities = 79/260 (30%), Positives = 117/260 (45%)
Frame = +2
Query: 44 PRRKTEGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALH 223
P + + NLQEL L NQ+ LS L+ L L+ N + LPPG+F L+
Sbjct: 213 PMGTFDALGNLQELALQENQIGTLSPGLFHNNRNLQRLYLSNNHISHLPPGIFMQLPHLN 272
Query: 224 TLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTL 403
L L N L L + LR L L N + +LP ++ L +L L +NQL +
Sbjct: 273 KLTLFGNSLKELSPGVFGPMPNLRELWLYNNHITSLPDNAFSHLNQLQVLILSHNQLSYI 332
Query: 404 PPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLD 583
P G L L L N LQ L+ LR + L NN+L L F + L
Sbjct: 333 SPGAFNGLTNLRELSLHTNALQDLDGNVFRSLANLRNVSLQNNRLRQLPGSIFANVNGLM 392
Query: 584 MLDLSNNSLTSVPEGLWASLGKAAGNMKVGFDISGNPWICDQKLDDLYRWLVANEDKMFF 763
+ L NN+L ++P G++ LG + NPW CD + L+ WL+ N ++
Sbjct: 393 TIQLQNNNLENLPLGIFDHLGNLC-----ELRLYDNPWRCDSNILPLHDWLILNRARLGT 447
Query: 764 QNNTHCAGPKALEGQTLLAV 823
C+ P ++ GQ+L+ +
Sbjct: 448 DTLPVCSSPASVRGQSLVII 467
Score = 95.5 bits (236), Expect = 6e-20
Identities = 69/191 (36%), Positives = 90/191 (47%)
Frame = +2
Query: 71 NLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRL 250
NL+EL L N LE + + L L+L N L P +F+ L L L ENRL
Sbjct: 150 NLKELQLYGNNLEYIPEGVFDHLVGLTKLNLGNNGFTHLSPRVFQHLGNLQVLRLYENRL 209
Query: 251 DILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPL 430
+ L L+ L L NQ+ TL L N +L L L NN + LPP +
Sbjct: 210 SDIPMGTFDALGNLQELALQENQIGTLSPGLFHNNRNLQRLYLSNNHISHLPPGIFMQLP 269
Query: 431 KLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSL 610
L L L GN L+ L G P P LR L+L NN +T+L AF L L +L LS+N L
Sbjct: 270 HLNKLTLFGNSLKELSPGVFGPMPNLRELWLYNNHITSLPDNAFSHLNQLQVLILSHNQL 329
Query: 611 TSVPEGLWASL 643
+ + G + L
Sbjct: 330 SYISPGAFNGL 340
Score = 87.0 bits (214), Expect = 2e-17
Identities = 63/205 (30%), Positives = 94/205 (45%)
Frame = +2
Query: 29 HVLLEPRRKTEGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKV 208
H+ P K I L L + N+L ++ + L+ L L N LK LP LF+
Sbjct: 64 HITELPEDKFLNISALIALKMEKNELANIMPGAFRNLGSLRHLSLANNKLKNLPVRLFQD 123
Query: 209 SAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNN 388
L TL+L N+L + + L+ L L GN L +P + + L L+LGNN
Sbjct: 124 VNNLETLLLSNNQLVQIQPAQFSQFSNLKELQLYGNNLEYIPEGVFDHLVGLTKLNLGNN 183
Query: 389 QLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRG 568
L P + + L+ L L NRL + G L+ L L N++ TL+ G F
Sbjct: 184 GFTHLSPRVFQHLGNLQVLRLYENRLSDIPMGTFDALGNLQELALQENQIGTLSPGLFHN 243
Query: 569 LQVLDMLDLSNNSLTSVPEGLWASL 643
+ L L LSNN ++ +P G++ L
Sbjct: 244 NRNLQRLYLSNNHISHLPPGIFMQL 268
Score = 80.1 bits (196), Expect = 3e-15
Identities = 55/164 (33%), Positives = 80/164 (48%)
Frame = +2
Query: 155 LDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLP 334
L + + LP F +AL L +++N L + R L +LRHL L+ N+L+ LP
Sbjct: 58 LQILNTHITELPEDKFLNISALIALKMEKNELANIMPGAFRNLGSLRHLSLANNKLKNLP 117
Query: 335 RKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRY 514
+L + +L L L NNQL + P L+ L L GN L+ + EG L
Sbjct: 118 VRLFQDVNNLETLLLSNNQLVQIQPAQFSQFSNLKELQLYGNNLEYIPEGVFDHLVGLTK 177
Query: 515 LFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASLG 646
L L NN T L+ F+ L L +L L N L+ +P G + +LG
Sbjct: 178 LNLGNNGFTHLSPRVFQHLGNLQVLRLYENRLSDIPMGTFDALG 221
Score = 53.5 bits (127), Expect = 3e-07
Identities = 40/127 (31%), Positives = 52/127 (40%)
Frame = +2
Query: 26 HHVLLEPRRKTEGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFK 205
+H+ P + LQ L LS+NQL +S PG F
Sbjct: 303 NHITSLPDNAFSHLNQLQVLILSHNQLSYIS------------------------PGAFN 338
Query: 206 VSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGN 385
L L L N L LD + R L LR++ L N+LR LP + AN L + L N
Sbjct: 339 GLTNLRELSLHTNALQDLDGNVFRSLANLRNVSLQNNRLRQLPGSIFANVNGLMTIQLQN 398
Query: 386 NQLQTLP 406
N L+ LP
Sbjct: 399 NNLENLP 405
>ref|NP_082180.2| carboxypeptidase N subunit 2 [Mus musculus].
Length = 547
Score = 116 bits (290), Expect = 3e-26
Identities = 90/257 (35%), Positives = 120/257 (46%), Gaps = 2/257 (0%)
Frame = +2
Query: 44 PRRKTEGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALH 223
P+ + + LQ L LSNN L L L + L+ L L NA+ L P LF +L
Sbjct: 185 PKGAFQSLTGLQMLKLSNNMLARLPEGALGSLSSLQELFLDGNAITELSPHLFSQLFSLE 244
Query: 224 TLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTL 403
L L+ N + L S L L L L N LRTLP L A+ L L L NQL+T+
Sbjct: 245 MLWLQHNAICHLPVSLFSSLHNLTFLSLKDNALRTLPEGLFAHNQGLLHLSLSYNQLETI 304
Query: 404 PPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLD 583
P +L L L N + L E +L L L++N LT L F L L
Sbjct: 305 PEGAFTNLSRLVSLTLSHNAITDLPEHVFRNLEQLVKLSLDSNNLTALHPALFHNLSRLQ 364
Query: 584 MLDLSNNSLTSVPEGLWASLGKAAGNMKVGFDISGNPWICDQKLDDLYRWLVANEDKMFF 763
+L+LS N LT++P G++ + + GNPW CD L L WL +++
Sbjct: 365 LLNLSRNQLTTLPGGIFDT-----NYDLFNLALLGNPWQCDCHLSYLTSWLRLYNNQI-- 417
Query: 764 QNNTH--CAGPKALEGQ 808
+NTH CAGP L+GQ
Sbjct: 418 -SNTHTFCAGPAYLKGQ 433
Score = 99.0 bits (245), Expect = 6e-21
Identities = 67/198 (33%), Positives = 98/198 (49%)
Frame = +2
Query: 50 RKTEGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTL 229
R G PNL ++ N Q+ L +P+L+ L++T + + L +F ++L L
Sbjct: 67 RAFSGSPNLTKVVFLNTQVRHLEPDAFGGLPRLQDLEITGSPVSNLSAHIFSNLSSLEKL 126
Query: 230 VLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPP 409
L +RL L + L L L GNQLRTLP +L + DL L+L N L LP
Sbjct: 127 TLDFDRLAGLPEDLFCHMDILESLQLQGNQLRTLPGRLFQSLRDLRTLNLAQNLLTQLPK 186
Query: 410 DLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDML 589
+ L+ L L N L L EG L L+ LFL+ N +T L+ F L L+ML
Sbjct: 187 GAFQSLTGLQMLKLSNNMLARLPEGALGSLSSLQELFLDGNAITELSPHLFSQLFSLEML 246
Query: 590 DLSNNSLTSVPEGLWASL 643
L +N++ +P L++SL
Sbjct: 247 WLQHNAICHLPVSLFSSL 264
Score = 97.1 bits (240), Expect = 2e-20
Identities = 64/192 (33%), Positives = 96/192 (50%)
Frame = +2
Query: 62 GIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKE 241
G+P LQ+L ++ + + +LSA + L+ L L + L LP LF L +L L+
Sbjct: 95 GLPRLQDLEITGSPVSNLSAHIFSNLSSLEKLTLDFDRLAGLPEDLFCHMDILESLQLQG 154
Query: 242 NRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLR 421
N+L L + L+ LR L+L+ N L LP+ + T L +L L NN L LP L
Sbjct: 155 NQLRTLPGRLFQSLRDLRTLNLAQNLLTQLPKGAFQSLTGLQMLKLSNNMLARLPEGALG 214
Query: 422 GPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSN 601
L+ L L+GN + L + L L+L +N + L F L L L L +
Sbjct: 215 SLSSLQELFLDGNAITELSPHLFSQLFSLEMLWLQHNAICHLPVSLFSSLHNLTFLSLKD 274
Query: 602 NSLTSVPEGLWA 637
N+L ++PEGL+A
Sbjct: 275 NALRTLPEGLFA 286
Score = 77.4 bits (189), Expect = 2e-14
Identities = 60/189 (31%), Positives = 87/189 (46%)
Frame = +2
Query: 77 QELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLDI 256
+E+ S+ QL D+ P + + A + F S L +V ++
Sbjct: 31 REVFCSDEQLADIPPDI---PPHITDIVFVETAFTTVRTRAFSGSPNLTKVVFLNTQVRH 87
Query: 257 LDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKL 436
L+ GL L+ L+++G+ + L + +N + L L L ++L LP DL L
Sbjct: 88 LEPDAFGGLPRLQDLEITGSPVSNLSAHIFSNLSSLEKLTLDFDRLAGLPEDLFCHMDIL 147
Query: 437 EWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTS 616
E L L+GN+L+ L LR L L N LT L GAF+ L L ML LSNN L
Sbjct: 148 ESLQLQGNQLRTLPGRLFQSLRDLRTLNLAQNLLTQLPKGAFQSLTGLQMLKLSNNMLAR 207
Query: 617 VPEGLWASL 643
+PEG SL
Sbjct: 208 LPEGALGSL 216
>ref|NP_032366.2| insulin-like growth factor-binding protein complex acid labile
subunit precursor [Mus musculus].
Length = 603
Score = 115 bits (288), Expect = 6e-26
Identities = 91/293 (31%), Positives = 139/293 (47%), Gaps = 22/293 (7%)
Frame = +2
Query: 23 GHHVLLEPRRKT-EGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGL 199
GH+ + + KT EG+ L+ L L++NQ+ ++ + + V++L+ N L+ LP +
Sbjct: 322 GHNRIRQLGEKTFEGLGQLEVLTLNDNQIHEVKVGAFFGLFNVAVMNLSGNCLRSLPEHV 381
Query: 200 FKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDL 379
F+ LH+L L+ + L + GL LR L L N + ++ + LA ++L LDL
Sbjct: 382 FQGLGRLHSLHLEHSCLGRIRLHTFAGLSGLRRLFLRDNSISSIEEQSLAGLSELLELDL 441
Query: 380 GNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGA 559
NQL LP L +G +LE+L L N+L +L E L P + +L L++N+L T A G
Sbjct: 442 TANQLTHLPRQLFQGLGQLEYLLLSNNQLTMLSEDVLGPLQRAFWLDLSHNRLETPAEGL 501
Query: 560 FRGLQVLDMLDLSNNSL-TSVP----EGLWASLGKAAGNMKVGFDISGNPWICDQKLDDL 724
F L L L+L NNSL T VP E LW + NPW C L L
Sbjct: 502 FSSLGRLRYLNLRNNSLQTFVPQPGLERLW---------------LDANPWDCSCPLKAL 546
Query: 725 YRWLVANE----------------DKMFFQNNTHCAGPKALEGQTLLAVAASL 835
+ + N ++ NN CAGP + G L ++ +L
Sbjct: 547 RDFALQNPGVVPRFVQTVCEGDDCQPVYTYNNITCAGPANVSGLDLRDISETL 599
Score = 102 bits (253), Expect = 7e-22
Identities = 68/197 (34%), Positives = 104/197 (52%)
Frame = +2
Query: 59 EGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLK 238
+G+ NL EL L+ N+L L L + +L+ LDL+RNAL+ + +F L L L
Sbjct: 191 QGLGNLHELVLAGNKLTYLQPALLCGLGELRELDLSRNALRSVKANVFIHLPRLQKLYLD 250
Query: 239 ENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLL 418
N + + G+KALR LDLS N++ L LH+L L +N + +L P
Sbjct: 251 RNLITAVAPRAFLGMKALRWLDLSHNRVAGLLEDTFPGLLGLHVLRLAHNAITSLRPRTF 310
Query: 419 RGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLS 598
+ LE L L NR++ L E +L L LN+N++ + GAF GL + +++LS
Sbjct: 311 KDLHFLEELQLGHNRIRQLGEKTFEGLGQLEVLTLNDNQIHEVKVGAFFGLFNVAVMNLS 370
Query: 599 NNSLTSVPEGLWASLGK 649
N L S+PE ++ LG+
Sbjct: 371 GNCLRSLPEHVFQGLGR 387
Score = 100 bits (250), Expect = 1e-21
Identities = 72/214 (33%), Positives = 108/214 (50%)
Frame = +2
Query: 2 WLDGKGRGHHVLLEPRRKTEGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALK 181
WLDG +++ P + + +L L+L + L L + LL + L L L RN L+
Sbjct: 80 WLDG----NNLSSIPSAAFQNLSSLDFLNLQGSWLRSLEPQALLGLQNLYHLHLERNLLR 135
Query: 182 RLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTD 361
L GLF+ + +L +L L N L L+ RGL L L+L N L LP + +
Sbjct: 136 SLAAGLFRHTPSLASLSLGNNLLGRLEEGLFRGLSHLWDLNLGWNSLVVLPDTVFQGLGN 195
Query: 362 LHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLT 541
LH L L N+L L P LL G +L L L N L+ ++ P+L+ L+L+ N +T
Sbjct: 196 LHELVLAGNKLTYLQPALLCGLGELRELDLSRNALRSVKANVFIHLPRLQKLYLDRNLIT 255
Query: 542 TLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASL 643
+A AF G++ L LDLS+N + + E + L
Sbjct: 256 AVAPRAFLGMKALRWLDLSHNRVAGLLEDTFPGL 289
Score = 90.9 bits (224), Expect = 2e-18
Identities = 66/194 (34%), Positives = 99/194 (51%)
Frame = +2
Query: 38 LEPRRKTEGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAA 217
LEP+ G+ NL LHL N L L+A P L L L N L RL GLF+ +
Sbjct: 113 LEPQALL-GLQNLYHLHLERNLLRSLAAGLFRHTPSLASLSLGNNLLGRLEEGLFRGLSH 171
Query: 218 LHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQ 397
L L L N L +L + +GL L L L+GN+L L LL +L LDL N L+
Sbjct: 172 LWDLNLGWNSLVVLPDTVFQGLGNLHELVLAGNKLTYLQPALLCGLGELRELDLSRNALR 231
Query: 398 TLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQV 577
++ ++ +L+ L+L+ N + + LR+L L++N++ L F GL
Sbjct: 232 SVKANVFIHLPRLQKLYLDRNLITAVAPRAFLGMKALRWLDLSHNRVAGLLEDTFPGLLG 291
Query: 578 LDMLDLSNNSLTSV 619
L +L L++N++TS+
Sbjct: 292 LHVLRLAHNAITSL 305
Score = 81.6 bits (200), Expect = 9e-16
Identities = 63/219 (28%), Positives = 97/219 (44%), Gaps = 24/219 (10%)
Frame = +2
Query: 65 IPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKEN 244
+P LQ+L+L N + ++ + L + L+ LDL+ N + L F LH L L N
Sbjct: 241 LPRLQKLYLDRNLITAVAPRAFLGMKALRWLDLSHNRVAGLLEDTFPGLLGLHVLRLAHN 300
Query: 245 RLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQ----------- 391
+ L + L L L L N++R L K L +L L +NQ
Sbjct: 301 AITSLRPRTFKDLHFLEELQLGHNRIRQLGEKTFEGLGQLEVLTLNDNQIHEVKVGAFFG 360
Query: 392 -------------LQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNN 532
L++LP + +G +L LHLE + L + A LR LFL +N
Sbjct: 361 LFNVAVMNLSGNCLRSLPEHVFQGLGRLHSLHLEHSCLGRIRLHTFAGLSGLRRLFLRDN 420
Query: 533 KLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASLGK 649
++++ + GL L LDL+ N LT +P L+ LG+
Sbjct: 421 SISSIEEQSLAGLSELLELDLTANQLTHLPRQLFQGLGQ 459
Score = 72.8 bits (177), Expect = 4e-13
Identities = 61/165 (36%), Positives = 77/165 (46%)
Frame = +2
Query: 149 KVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRT 328
+ L L N L +P F+ ++L L L+ + L L+ L GL+ L HL L N LR+
Sbjct: 77 RALWLDGNNLSSIPSAAFQNLSSLDFLNLQGSWLRSLEPQALLGLQNLYHLHLERNLLRS 136
Query: 329 LPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKL 508
L L + L L LGNN L L L RG L L+L N L VL + L
Sbjct: 137 LAAGLFRHTPSLASLSLGNNLLGRLEEGLFRGLSHLWDLNLGWNSLVVLPDTVFQGLGNL 196
Query: 509 RYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASL 643
L L NKLT L GL L LDLS N+L SV ++ L
Sbjct: 197 HELVLAGNKLTYLQPALLCGLGELRELDLSRNALRSVKANVFIHL 241
Score = 72.0 bits (175), Expect = 7e-13
Identities = 47/118 (39%), Positives = 60/118 (50%)
Frame = +2
Query: 293 RHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQV 472
R L L GN L ++P N + L L+L + L++L P L G L LHLE N L+
Sbjct: 77 RALWLDGNNLSSIPSAAFQNLSSLDFLNLQGSWLRSLEPQALLGLQNLYHLHLERNLLRS 136
Query: 473 LEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASLG 646
L G P L L L NN L L G FRGL L L+L NSL +P+ ++ LG
Sbjct: 137 LAAGLFRHTPSLASLSLGNNLLGRLEEGLFRGLSHLWDLNLGWNSLVVLPDTVFQGLG 194
Score = 61.2 bits (147), Expect = 1e-09
Identities = 55/169 (32%), Positives = 77/169 (45%)
Frame = +2
Query: 143 QLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQL 322
+L V +RN L +LP + + L L N L + ++ + L +L L+L G+ L
Sbjct: 55 ELSVFCSSRN-LTQLPDS---IPVSTRALWLDGNNLSSIPSAAFQNLSSLDFLNLQGSWL 110
Query: 323 RTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQP 502
R+L + L +L+ L L N L++L L R L L L N L LEEG
Sbjct: 111 RSLEPQALLGLQNLYHLHLERNLLRSLAAGLFRHTPSLASLSLGNNLLGRLEEGLFRGLS 170
Query: 503 KLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASLGK 649
L L L N L L F+GL L L L+ N LT + L LG+
Sbjct: 171 HLWDLNLGWNSLVVLPDTVFQGLGNLHELVLAGNKLTYLQPALLCGLGE 219
>ref|NP_848846.3| leucine-rich repeat transmembrane neuronal protein 4 [Mus
musculus].
Length = 518
Score = 107 bits (266), Expect = 2e-23
Identities = 79/253 (31%), Positives = 120/253 (47%), Gaps = 3/253 (1%)
Frame = +2
Query: 59 EGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLK 238
+GI L+EL LS+N++ L K PVP L+ LDL+ N L+ L FK L L L+
Sbjct: 106 QGIRRLKELILSSNKITYLHNKTFHPVPNLRNLDLSYNKLQTLQSEQFKGLRKLIILHLR 165
Query: 239 ENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLL 418
N L + + + L LDL N+LR+L R A L L L +NQ +
Sbjct: 166 SNSLKTVPIRVFQDCRNLDFLDLGYNRLRSLSRNAFAGLLKLKELHLEHNQFSKINFAHF 225
Query: 419 RGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLS 598
L ++L+ NR++ + +G L L L+ N + + G F+ L L L+L
Sbjct: 226 PRLFNLRSIYLQWNRIRSVSQGLTWTWSSLHTLDLSGNDIQAIEPGTFKCLPNLQKLNLD 285
Query: 599 NNSLTSVPE---GLWASLGKAAGNMKVGFDISGNPWICDQKLDDLYRWLVANEDKMFFQN 769
+N LT+V + W SL + +SGN W C + + L+ WL K ++
Sbjct: 286 SNKLTNVSQETVNAWISL--------ISITLSGNMWECSRSICPLFYWL--KNFKGNKES 335
Query: 770 NTHCAGPKALEGQ 808
CAGPK ++G+
Sbjct: 336 TMICAGPKHIQGE 348
>ref|NP_032174.2| platelet glycoprotein V precursor [Mus musculus].
Length = 567
Score = 106 bits (265), Expect = 3e-23
Identities = 73/192 (38%), Positives = 98/192 (51%), Gaps = 1/192 (0%)
Frame = +2
Query: 71 NLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRL 250
NLQEL L+ NQL L A + +LK+LDL+RN L LP GL L L+L N+L
Sbjct: 147 NLQELGLNQNQLSFLPANLFSSLRELKLLDLSRNNLTHLPKGLLGAQVKLEKLLLYSNQL 206
Query: 251 DILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPL 430
+D+ L L AL L L N LR++ +L L L N L++LPP L
Sbjct: 207 TSVDSGLLSNLGALTELRLERNHLRSVAPGAFDRLGNLSSLTLSGNLLESLPPALFLHVS 266
Query: 431 KLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNN-S 607
+ L L N L+ L + LR L+LN L+TL A AFR L L L L+ N
Sbjct: 267 SVSRLTLFENPLEELPDVLFGEMAGLRELWLNGTHLSTLPAAAFRNLSGLQTLGLTRNPR 326
Query: 608 LTSVPEGLWASL 643
L+++P G++ L
Sbjct: 327 LSALPRGVFQGL 338
Score = 105 bits (261), Expect = 8e-23
Identities = 71/191 (37%), Positives = 98/191 (51%)
Frame = +2
Query: 62 GIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKE 241
G+ LQ L LS++ + + + +LK L LTRN + RLP + L L L
Sbjct: 72 GMTVLQRLMLSDSHISAIDPGTFNDLVKLKTLRLTRNKISRLPRAILDKMVLLEQLFLDH 131
Query: 242 NRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLR 421
N L LD + + L+ L+ L L+ NQL LP L ++ +L +LDL N L LP LL
Sbjct: 132 NALRDLDQNLFQQLRNLQELGLNQNQLSFLPANLFSSLRELKLLDLSRNNLTHLPKGLLG 191
Query: 422 GPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSN 601
+KLE L L N+L ++ G L+ L L L N L ++A GAF L L L LS
Sbjct: 192 AQVKLEKLLLYSNQLTSVDSGLLSNLGALTELRLERNHLRSVAPGAFDRLGNLSSLTLSG 251
Query: 602 NSLTSVPEGLW 634
N L S+P L+
Sbjct: 252 NLLESLPPALF 262
Score = 100 bits (250), Expect = 1e-21
Identities = 75/241 (31%), Positives = 111/241 (46%), Gaps = 1/241 (0%)
Frame = +2
Query: 74 LQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLD 253
L EL L N L ++ + L L L+ N L+ LPP LF +++ L L EN L+
Sbjct: 220 LTELRLERNHLRSVAPGAFDRLGNLSSLTLSGNLLESLPPALFLHVSSVSRLTLFENPLE 279
Query: 254 ILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNN-QLQTLPPDLLRGPL 430
L + LR L L+G L TLP N + L L L N +L LP + +G
Sbjct: 280 ELPDVLFGEMAGLRELWLNGTHLSTLPAAAFRNLSGLQTLGLTRNPRLSALPRGVFQGLR 339
Query: 431 KLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSL 610
+L L L N L L + L LR + L +N+L L FR L L+ + L +N L
Sbjct: 340 ELRVLALHTNALAELRDDALRGLGHLRQVSLRHNRLRALPRTLFRNLSSLESVQLEHNQL 399
Query: 611 TSVPEGLWASLGKAAGNMKVGFDISGNPWICDQKLDDLYRWLVANEDKMFFQNNTHCAGP 790
++P ++A+L + + + NPW+CD L +WL + D + C GP
Sbjct: 400 ETLPGDVFAALPQLTQVL-----LGHNPWLCDCGLWPFLQWLRHHPDILGRDEPPQCRGP 454
Query: 791 K 793
+
Sbjct: 455 E 455
Score = 77.4 bits (189), Expect = 2e-14
Identities = 62/190 (32%), Positives = 89/190 (46%)
Frame = +2
Query: 74 LQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLD 253
L+ L L+ N++ L L + L+ L L NAL+ L LF+ L L L +N+L
Sbjct: 100 LKTLRLTRNKISRLPRAILDKMVLLEQLFLDHNALRDLDQNLFQQLRNLQELGLNQNQLS 159
Query: 254 ILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLK 433
L A+ L+ L+ LDLS N L LP+ LL L L L +NQL ++ LL
Sbjct: 160 FLPANLFSSLRELKLLDLSRNNLTHLPKGLLGAQVKLEKLLLYSNQLTSVDSGLLSNLGA 219
Query: 434 LEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLT 613
L L LE N L+ + G L L L+ N L +L F + + L L N L
Sbjct: 220 LTELRLERNHLRSVAPGAFDRLGNLSSLTLSGNLLESLPPALFLHVSSVSRLTLFENPLE 279
Query: 614 SVPEGLWASL 643
+P+ L+ +
Sbjct: 280 ELPDVLFGEM 289
>ref|NP_954693.1| reticulon-4 receptor-like 2 precursor [Mus musculus].
Length = 420
Score = 101 bits (251), Expect = 1e-21
Identities = 84/258 (32%), Positives = 115/258 (44%), Gaps = 3/258 (1%)
Frame = +2
Query: 68 PNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENR 247
P+ Q L L NN + L P L L L N L + PG F+ AL L L +NR
Sbjct: 60 PSTQRLFLQNNLIRSLRPGTF--GPNLLTLWLFSNNLSTIHPGTFRHLQALEELDLGDNR 117
Query: 248 -LDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRG 424
L L+ +GL+ L+ L L QL +LP + L L L N L L DL
Sbjct: 118 HLRSLEPDTFQGLERLQSLHLYRCQLSSLPGNIFRGLVSLQYLYLQENSLLHLQDDLFAD 177
Query: 425 PLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNN 604
L L L GNRL++L E L L L+ N+L + AF GL L +L L NN
Sbjct: 178 LANLSHLFLHGNRLRLLTEHVFRGLGSLDRLLLHGNRLQGVHRAAFHGLSRLTILYLFNN 237
Query: 605 SLTSVPEGLWASLGKAAGNMKV--GFDISGNPWICDQKLDDLYRWLVANEDKMFFQNNTH 778
SL S+P G+A ++ ++ NPW CD + L+ W + ++
Sbjct: 238 SLASLP-------GEALADLPALEFLRLNANPWACDCRARPLWAWF---QRARVSSSDVT 287
Query: 779 CAGPKALEGQTLLAVAAS 832
CA P +G+ L A+ S
Sbjct: 288 CATPPERQGRDLRALRDS 305
Score = 68.2 bits (165), Expect = 1e-11
Identities = 50/134 (37%), Positives = 64/134 (47%)
Frame = +2
Query: 59 EGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLK 238
+G+ LQ LHL QL L + L+ L L N+L L LF A L L L
Sbjct: 128 QGLERLQSLHLYRCQLSSLPGNIFRGLVSLQYLYLQENSLLHLQDDLFADLANLSHLFLH 187
Query: 239 ENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLL 418
NRL +L RGL +L L L GN+L+ + R + L IL L NN L +LP + L
Sbjct: 188 GNRLRLLTEHVFRGLGSLDRLLLHGNRLQGVHRAAFHGLSRLTILYLFNNSLASLPGEAL 247
Query: 419 RGPLKLEWLHLEGN 460
LE+L L N
Sbjct: 248 ADLPALEFLRLNAN 261
>ref|NP_848793.1| leucine-rich repeat transmembrane neuronal protein 3 precursor [Mus
musculus].
Length = 582
Score = 98.6 bits (244), Expect = 7e-21
Identities = 74/281 (26%), Positives = 127/281 (45%), Gaps = 28/281 (9%)
Frame = +2
Query: 59 EGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLK 238
+G+ L L+L +N + ++ + +LK L L+ N + F+ L L L
Sbjct: 82 KGLNQLTWLYLDHNHISNIDENAFNGIRRLKELILSSNRISYFLNNTFRPVTNLRNLDLS 141
Query: 239 ENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLL 418
N+L L + RGL+ L L L N LRT+P ++ + +L +LDLG N++++L ++
Sbjct: 142 YNQLHSLGSEQFRGLRKLLSLHLRSNSLRTIPVRIFQDCRNLELLDLGYNRIRSLARNVF 201
Query: 419 RGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLA---AGAFRGLQVLDM- 586
G ++L+ LHLE N+ L L+ L++ NK++ + + + LQ LD+
Sbjct: 202 AGMIRLKELHLEHNQFSKLNLALFPRLVSLQNLYMQWNKISVIGQTMSWTWSSLQRLDLS 261
Query: 587 ---------------------LDLSNNSLTSVPEGL---WASLGKAAGNMKVGFDISGNP 694
L+L +N LT + + + W SL ++GN
Sbjct: 262 GNEIEAFSGPSVFQCVPNLQRLNLDSNKLTFIGQEILDSWISLN--------DISLAGNI 313
Query: 695 WICDQKLDDLYRWLVANEDKMFFQNNTHCAGPKALEGQTLL 817
W C + + L WL K +N CA PK L+G ++
Sbjct: 314 WECSRNICSLVNWL--RSFKGLRENTIICASPKELQGVNVI 352
Score = 69.3 bits (168), Expect = 5e-12
Identities = 50/163 (30%), Positives = 74/163 (45%)
Frame = +2
Query: 155 LDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLP 334
L L N+L++L FK L L L N + +D + G++ L+ L LS N++
Sbjct: 66 LSLRYNSLQKLKYNQFKGLNQLTWLYLDHNHISNIDENAFNGIRRLKELILSSNRISYFL 125
Query: 335 RKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRY 514
T+L LDL NQL +L + RG KL LHL N L+ + L
Sbjct: 126 NNTFRPVTNLRNLDLSYNQLHSLGSEQFRGLRKLLSLHLRSNSLRTIPVRIFQDCRNLEL 185
Query: 515 LFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASL 643
L L N++ +LA F G+ L L L +N + + L+ L
Sbjct: 186 LDLGYNRIRSLARNVFAGMIRLKELHLEHNQFSKLNLALFPRL 228
Score = 49.7 bits (117), Expect = 4e-06
Identities = 36/140 (25%), Positives = 66/140 (47%), Gaps = 1/140 (0%)
Frame = +2
Query: 44 PRRKTEGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALH 223
P R + NL+ L L N++ L+ + +LK L L N +L LF +L
Sbjct: 173 PVRIFQDCRNLELLDLGYNRIRSLARNVFAGMIRLKELHLEHNQFSKLNLALFPRLVSLQ 232
Query: 224 TLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLP-RKLLANFTDLHILDLGNNQLQT 400
L ++ N++ ++ + +L+ LDLSGN++ + +L L+L +N+L
Sbjct: 233 NLYMQWNKISVIGQTMSWTWSSLQRLDLSGNEIEAFSGPSVFQCVPNLQRLNLDSNKLTF 292
Query: 401 LPPDLLRGPLKLEWLHLEGN 460
+ ++L + L + L GN
Sbjct: 293 IGQEILDSWISLNDISLAGN 312
>ref|NP_821072.1| leucine-rich repeat transmembrane neuronal protein 2 precursor [Mus
musculus].
Length = 515
Score = 97.8 bits (242), Expect = 1e-20
Identities = 77/285 (27%), Positives = 126/285 (44%), Gaps = 19/285 (6%)
Frame = +2
Query: 20 RGHHVLLEPRRKTEGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGL 199
R +H+ R + L LHL +NQ+ + + +LK L L+ N + LP
Sbjct: 69 RHNHITALERDQFASFSQLTWLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLPNTT 128
Query: 200 FKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDL 379
F L L L N+L L GL+ L+ L L N LRT+P +L + L LDL
Sbjct: 129 FTQLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEFLDL 188
Query: 380 GNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGA 559
N+L++L + G +KL LHLE N+L + L LFL NK++ L G
Sbjct: 189 STNRLRSLARNGFAGLIKLRELHLEHNQLTKINFAHFLRLSSLHTLFLQWNKISNLTCGM 248
Query: 560 FRGLQVLDMLDLSNNSLTSVPEGLWASL-----------------GKAAGNMK--VGFDI 682
L+ LDL+ N + ++ ++ ++ K ++K +
Sbjct: 249 DWTWSTLEKLDLTGNEIKAIDLTVFETMPNLKILLMDNNKLNSLDSKILNSLKSLTTVGL 308
Query: 683 SGNPWICDQKLDDLYRWLVANEDKMFFQNNTHCAGPKALEGQTLL 817
SGN W C ++ L WL + + + ++++ C P +G+ +L
Sbjct: 309 SGNLWECSPRVCALASWLGSFQGR--WEHSILCHSPDHTQGEDIL 351
Score = 76.6 bits (187), Expect = 3e-14
Identities = 52/155 (33%), Positives = 73/155 (47%)
Frame = +2
Query: 155 LDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLP 334
L L N + L F + L L L N++ + +GL L+ L LS N++ LP
Sbjct: 66 LSLRHNHITALERDQFASFSQLTWLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLP 125
Query: 335 RKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRY 514
+L LDL NQL +L P+L G KL+ LHL N L+ + L +
Sbjct: 126 NTTFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEF 185
Query: 515 LFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSV 619
L L+ N+L +LA F GL L L L +N LT +
Sbjct: 186 LDLSTNRLRSLARNGFAGLIKLRELHLEHNQLTKI 220
>ref|NP_001157792.1| chondroadherin-like [Mus musculus].
Length = 748
Score = 97.4 bits (241), Expect = 2e-20
Identities = 86/279 (30%), Positives = 124/279 (44%), Gaps = 19/279 (6%)
Frame = +2
Query: 62 GIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKE 241
G+ L L+LS+NQL LSA L P L L L N R+P + L +L L++
Sbjct: 470 GLDRLLYLYLSHNQLSGLSAAALEGAPNLGYLYLEHNRFLRIPGTALRALPTLVSLHLQD 529
Query: 242 NRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLR 421
N +D L L G +ALR L LSGN HI + P L
Sbjct: 530 NAVDRLAPGDLAGARALRCLYLSGN----------------HITQVS--------PGALG 565
Query: 422 GPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGL-QVLDMLDLS 598
+LE LHL+ NRL+ + G L P L+ L L+ N L L GAF+ + + L L L+
Sbjct: 566 PARELEKLHLDRNRLREVPTGALEGLPALKELQLSGNPLRALPDGAFQPVGRSLQQLFLN 625
Query: 599 NNSLTSVPEGLWASLGKAAGNMKVG------------------FDISGNPWICDQKLDDL 724
++ L + ++ LGK ++ + D+SGNP+ CD +L L
Sbjct: 626 SSDLEQISPRAFSGLGKGLRSLYLHKNQLQSLPAPLGLSGLELVDLSGNPFHCDCQLLPL 685
Query: 725 YRWLVANEDKMFFQNNTHCAGPKALEGQTLLAVAASLEA 841
+RWL + + CA P ++ GQ + A EA
Sbjct: 686 HRWLTG----LNLRVGATCATPPSVRGQKVKVAAPVFEA 720
Score = 92.0 bits (227), Expect = 7e-19
Identities = 91/308 (29%), Positives = 121/308 (39%), Gaps = 46/308 (14%)
Frame = +2
Query: 29 HVLLEPRRKTEGIPNL-----QELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPP 193
HV + TE +PN Q L L N L+ L A +P L LDL ++ +
Sbjct: 44 HVTCRHQNLTE-VPNTIPELTQRLDLQGNILKVLPAAAFQDLPHLTHLDLRNCQVEMVAE 102
Query: 194 GLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHIL 373
G F+ L L L NRL L L GL +LR L+L GN L L L L
Sbjct: 103 GAFRGLGRLLLLNLASNRLSTLPQEALDGLGSLRRLELEGNMLEELRPGTFGALGSLTTL 162
Query: 374 DLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAA 553
+L +N L LP +G L+ WL L N L VL LA P LR L L++N+L L
Sbjct: 163 NLAHNALVYLPAMAFQGLLRTRWLQLSHNALSVLAPEALAGLPALRRLSLHHNELQALPG 222
Query: 554 GAFRGLQVLDMLDLSNNSLT----------------SVPEGLWASLGKAA---------- 655
A + L L+L +N LT ++ G +LG A
Sbjct: 223 AALSQARSLARLELGHNPLTYTGEEDGLALPGLRELALDHGSLQALGPRAFAHCPRLHTL 282
Query: 656 ---GNMKVGFD------------ISGNPWICDQKLDDLYRWLVANEDKMFFQNNTHCAGP 790
GN + GNP C L WLV + +++ C GP
Sbjct: 283 DLRGNQLTTLPPLQVPGQLRRLRLQGNPLWCACHARPLLEWLV----RARVRSDGACRGP 338
Query: 791 KALEGQTL 814
+ L G+ L
Sbjct: 339 RRLRGEAL 346
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 37,829,218
Number of extensions: 1157749
Number of successful extensions: 7779
Number of sequences better than 1.0e-05: 178
Number of HSP's gapped: 6566
Number of HSP's successfully gapped: 543
Length of query: 352
Length of database: 15,617,559
Length adjustment: 102
Effective length of query: 250
Effective length of database: 12,553,887
Effective search space: 3138471750
Effective search space used: 3138471750
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-001977
(1058 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_003123120.1| PREDICTED: leucine-rich alpha-2-glycoprotein... 522 e-148
Alignment gi|XP_003123119.1| PREDICTED: leucine-rich alpha-2-glycoprotein... 522 e-148
Alignment gi|XP_003358805.1| PREDICTED: leucine-rich repeat-containing pr... 123 2e-28
Alignment gi|XP_003358804.1| PREDICTED: carboxypeptidase N subunit 2 [Sus... 123 2e-28
Alignment gi|NP_001041651.1| insulin-like growth factor-binding protein c... 106 2e-23
Alignment gi|XP_003125026.2| PREDICTED: leucine-rich repeat transmembrane... 106 2e-23
Alignment gi|XP_003125025.2| PREDICTED: leucine-rich repeat transmembrane... 106 2e-23
Alignment gi|XP_003132649.1| PREDICTED: platelet glycoprotein V-like [Sus... 102 3e-22
Alignment gi|XP_001924493.1| PREDICTED: leucine-rich repeat transmembrane... 99 3e-21
Alignment gi|XP_003124039.2| PREDICTED: leucine-rich repeat transmembrane... 99 3e-21
>ref|XP_003123120.1| PREDICTED: leucine-rich alpha-2-glycoprotein-like isoform 2 [Sus
scrofa].
Length = 267
Score = 522 bits (1344), Expect = e-148
Identities = 260/261 (99%), Positives = 261/261 (100%)
Frame = +2
Query: 59 EGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLK 238
+GIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLK
Sbjct: 7 QGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLK 66
Query: 239 ENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLL 418
ENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLL
Sbjct: 67 ENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLL 126
Query: 419 RGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLS 598
RGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLS
Sbjct: 127 RGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLS 186
Query: 599 NNSLTSVPEGLWASLGKAAGNMKVGFDISGNPWICDQKLDDLYRWLVANEDKMFFQNNTH 778
NNSLTSVPEGLWASLGKAAGNMKVGFDISGNPWICDQKLDDLYRWLVANEDKMFFQNNTH
Sbjct: 187 NNSLTSVPEGLWASLGKAAGNMKVGFDISGNPWICDQKLDDLYRWLVANEDKMFFQNNTH 246
Query: 779 CAGPKALEGQTLLAVAASLEA 841
CAGPKALEGQTLLAVAASLEA
Sbjct: 247 CAGPKALEGQTLLAVAASLEA 267
Score = 77.4 bits (189), Expect = 1e-14
Identities = 48/125 (38%), Positives = 65/125 (52%)
Frame = +2
Query: 257 LDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKL 436
+ A L+G+ L+ L LS NQL L K L L +LDL N L+ LPP L + L
Sbjct: 1 MPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAAL 60
Query: 437 EWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTS 616
L L+ NRL +L+ +L LR+L L+ N+L TL L +LDL NN L +
Sbjct: 61 HTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQT 120
Query: 617 VPEGL 631
+P L
Sbjct: 121 LPPDL 125
Score = 56.2 bits (134), Expect = 3e-08
Identities = 38/104 (36%), Positives = 50/104 (48%)
Frame = +2
Query: 329 LPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKL 508
+P +L +L L L NNQL+ L L +L+ L L N L+ L G L
Sbjct: 1 MPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAAL 60
Query: 509 RYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWAS 640
L L N+L L A RGL+ L LDLS N L ++P L A+
Sbjct: 61 HTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLAN 104
Score = 56.2 bits (134), Expect = 3e-08
Identities = 39/110 (35%), Positives = 52/110 (47%)
Frame = +2
Query: 23 GHHVLLEPRRKTEGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLF 202
G+ + PR+ +L L L NNQL+ L L +L+ L L N L+ L G
Sbjct: 91 GNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFL 150
Query: 203 KVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLAN 352
L L L N+L L A RGL+ L LDLS N L ++P L A+
Sbjct: 151 APQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWAS 200
>ref|XP_003123119.1| PREDICTED: leucine-rich alpha-2-glycoprotein-like isoform 1 [Sus
scrofa].
Length = 356
Score = 522 bits (1344), Expect = e-148
Identities = 260/261 (99%), Positives = 261/261 (100%)
Frame = +2
Query: 59 EGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLK 238
+GIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLK
Sbjct: 96 QGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLK 155
Query: 239 ENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLL 418
ENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLL
Sbjct: 156 ENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLL 215
Query: 419 RGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLS 598
RGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLS
Sbjct: 216 RGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLS 275
Query: 599 NNSLTSVPEGLWASLGKAAGNMKVGFDISGNPWICDQKLDDLYRWLVANEDKMFFQNNTH 778
NNSLTSVPEGLWASLGKAAGNMKVGFDISGNPWICDQKLDDLYRWLVANEDKMFFQNNTH
Sbjct: 276 NNSLTSVPEGLWASLGKAAGNMKVGFDISGNPWICDQKLDDLYRWLVANEDKMFFQNNTH 335
Query: 779 CAGPKALEGQTLLAVAASLEA 841
CAGPKALEGQTLLAVAASLEA
Sbjct: 336 CAGPKALEGQTLLAVAASLEA 356
Score = 80.5 bits (197), Expect(2) = 3e-21
Identities = 59/177 (33%), Positives = 86/177 (48%), Gaps = 4/177 (2%)
Frame = +2
Query: 113 LSAKFLLPVPQLKVLDLTRN--ALKRLPPGLFKVSAALHTLVLKENRLDI--LDASWLRG 280
+SAK + P P ++ + N ++ PP F T+ L ++ + A L+G
Sbjct: 38 VSAKGVTPDPNACLVFHSSNGSSISCQPPAKFPHYLPADTIYLATEFFNLTQMPADILQG 97
Query: 281 LKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGN 460
+ L+ L LS NQL L K L L +LDL N L+ LPP L + L L L+ N
Sbjct: 98 IPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKEN 157
Query: 461 RLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGL 631
RL +L+ +L LR+L L+ N+L TL L +LDL NN L ++P L
Sbjct: 158 RLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDL 214
Score = 39.7 bits (91), Expect(2) = 3e-21
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +3
Query: 9 MEKGEATMSSWSPEGKQ 59
MEKGEATMSSWSPEGKQ
Sbjct: 1 MEKGEATMSSWSPEGKQ 17
Score = 57.0 bits (136), Expect = 2e-08
Identities = 39/107 (36%), Positives = 51/107 (47%)
Frame = +2
Query: 320 LRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQ 499
L +P +L +L L L NNQL+ L L +L+ L L N L+ L G
Sbjct: 87 LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVS 146
Query: 500 PKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWAS 640
L L L N+L L A RGL+ L LDLS N L ++P L A+
Sbjct: 147 AALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLAN 193
Score = 56.2 bits (134), Expect = 3e-08
Identities = 39/110 (35%), Positives = 52/110 (47%)
Frame = +2
Query: 23 GHHVLLEPRRKTEGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLF 202
G+ + PR+ +L L L NNQL+ L L +L+ L L N L+ L G
Sbjct: 180 GNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFL 239
Query: 203 KVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLAN 352
L L L N+L L A RGL+ L LDLS N L ++P L A+
Sbjct: 240 APQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWAS 289
>ref|XP_003358805.1| PREDICTED: leucine-rich repeat-containing protein 15-like [Sus
scrofa].
Length = 581
Score = 123 bits (309), Expect = 2e-28
Identities = 79/259 (30%), Positives = 123/259 (47%)
Frame = +2
Query: 59 EGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLK 238
+G+ NLQEL L NQ+ L L+ L L+ N + +LPPG+F L+ L L
Sbjct: 218 DGLGNLQELALQQNQIGMLPPGLFHNNRNLQRLYLSNNHISQLPPGIFMQLPQLNRLTLF 277
Query: 239 ENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLL 418
N L L + LR L L N + +LP + ++ L +L L NQ+ + PD
Sbjct: 278 GNSLKELSPGIFGPMHNLRELWLYDNHITSLPDNVFSSLRQLQVLILSRNQISYISPDAF 337
Query: 419 RGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLS 598
G ++L+ L L N LQ L+ L+ + L NN+L L F + L + L
Sbjct: 338 NGLVELQELSLHTNALQELDGNVFRMLTNLQNISLQNNRLRQLPGNIFANVNDLMTIQLQ 397
Query: 599 NNSLTSVPEGLWASLGKAAGNMKVGFDISGNPWICDQKLDDLYRWLVANEDKMFFQNNTH 778
NN L ++P G++ LGK + NPW CD + L+ WL+ N ++
Sbjct: 398 NNQLENLPLGIFDHLGKLC-----ELRLYDNPWRCDSDILPLHNWLLLNRARLGTDTLPV 452
Query: 779 CAGPKALEGQTLLAVAASL 835
C P ++ GQ+L+ ++ S+
Sbjct: 453 CFSPASVRGQSLIIISISV 471
Score = 94.4 bits (233), Expect = 1e-19
Identities = 66/183 (36%), Positives = 90/183 (49%)
Frame = +2
Query: 71 NLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRL 250
NL+EL L N LE + + L L+L +N+L L P +F+ L L L ENRL
Sbjct: 150 NLKELQLHGNHLEYIPDGVFDHLVGLTKLNLGKNSLTHLSPRVFQRLGNLQVLRLYENRL 209
Query: 251 DILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPL 430
L GL L+ L L NQ+ LP L N +L L L NN + LPP +
Sbjct: 210 SDLPMGCFDGLGNLQELALQQNQIGMLPPGLFHNNRNLQRLYLSNNHISQLPPGIFMQLP 269
Query: 431 KLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSL 610
+L L L GN L+ L G P LR L+L +N +T+L F L+ L +L LS N +
Sbjct: 270 QLNRLTLFGNSLKELSPGIFGPMHNLRELWLYDNHITSLPDNVFSSLRQLQVLILSRNQI 329
Query: 611 TSV 619
+ +
Sbjct: 330 SYI 332
Score = 90.1 bits (222), Expect = 2e-18
Identities = 65/195 (33%), Positives = 92/195 (47%)
Frame = +2
Query: 59 EGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLK 238
+G+ NL+ L LS+NQL + LK L L N L+ +P G+F L L L
Sbjct: 122 QGLDNLESLLLSSNQLVQIQPAHFSQFSNLKELQLHGNHLEYIPDGVFDHLVGLTKLNLG 181
Query: 239 ENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLL 418
+N L L + L L+ L L N+L LP +L L L NQ+ LPP L
Sbjct: 182 KNSLTHLSPRVFQRLGNLQVLRLYENRLSDLPMGCFDGLGNLQELALQQNQIGMLPPGLF 241
Query: 419 RGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLS 598
L+ L+L N + L G P+L L L N L L+ G F + L L L
Sbjct: 242 HNNRNLQRLYLSNNHISQLPPGIFMQLPQLNRLTLFGNSLKELSPGIFGPMHNLRELWLY 301
Query: 599 NNSLTSVPEGLWASL 643
+N +TS+P+ +++SL
Sbjct: 302 DNHITSLPDNVFSSL 316
Score = 80.5 bits (197), Expect = 1e-15
Identities = 59/193 (30%), Positives = 88/193 (45%)
Frame = +2
Query: 65 IPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKEN 244
I L L + N+L + + L+ L L N L+ LP GLF+ L +L+L N
Sbjct: 76 ISALIALRIEKNELSHIMPGAFRNLGSLRYLSLANNKLQVLPVGLFQGLDNLESLLLSSN 135
Query: 245 RLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRG 424
+L + + L+ L L GN L +P + + L L+LG N L L P + +
Sbjct: 136 QLVQIQPAHFSQFSNLKELQLHGNHLEYIPDGVFDHLVGLTKLNLGKNSLTHLSPRVFQR 195
Query: 425 PLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNN 604
L+ L L NRL L G L+ L L N++ L G F + L L LSNN
Sbjct: 196 LGNLQVLRLYENRLSDLPMGCFDGLGNLQELALQQNQIGMLPPGLFHNNRNLQRLYLSNN 255
Query: 605 SLTSVPEGLWASL 643
++ +P G++ L
Sbjct: 256 HISQLPPGIFMQL 268
Score = 79.7 bits (195), Expect = 2e-15
Identities = 57/188 (30%), Positives = 85/188 (45%)
Frame = +2
Query: 71 NLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRL 250
N L + N + +L+ L + L L + +N L + PG F+ +L L L N+L
Sbjct: 54 NAMSLQILNTHITELNESPFLNISALIALRIEKNELSHIMPGAFRNLGSLRYLSLANNKL 113
Query: 251 DILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPL 430
+L +GL L L LS NQL + + F++L L L N L+ +P + +
Sbjct: 114 QVLPVGLFQGLDNLESLLLSSNQLVQIQPAHFSQFSNLKELQLHGNHLEYIPDGVFDHLV 173
Query: 431 KLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSL 610
L L+L N L L L+ L L N+L+ L G F GL L L L N +
Sbjct: 174 GLTKLNLGKNSLTHLSPRVFQRLGNLQVLRLYENRLSDLPMGCFDGLGNLQELALQQNQI 233
Query: 611 TSVPEGLW 634
+P GL+
Sbjct: 234 GMLPPGLF 241
Score = 76.6 bits (187), Expect = 2e-14
Identities = 56/191 (29%), Positives = 90/191 (47%)
Frame = +2
Query: 71 NLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRL 250
+L+ L L+NN+L+ L + L+ L L+ N L ++ P F + L L L N L
Sbjct: 102 SLRYLSLANNKLQVLPVGLFQGLDNLESLLLSSNQLVQIQPAHFSQFSNLKELQLHGNHL 161
Query: 251 DILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPL 430
+ + L L L+L N L L ++ +L +L L N+L LP G
Sbjct: 162 EYIPDGVFDHLVGLTKLNLGKNSLTHLSPRVFQRLGNLQVLRLYENRLSDLPMGCFDGLG 221
Query: 431 KLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSL 610
L+ L L+ N++ +L G L+ L+L+NN ++ L G F L L+ L L NSL
Sbjct: 222 NLQELALQQNQIGMLPPGLFHNNRNLQRLYLSNNHISQLPPGIFMQLPQLNRLTLFGNSL 281
Query: 611 TSVPEGLWASL 643
+ G++ +
Sbjct: 282 KELSPGIFGPM 292
Score = 48.9 bits (115), Expect = 5e-06
Identities = 44/147 (29%), Positives = 66/147 (44%)
Frame = +2
Query: 26 HHVLLEPRRKTEGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFK 205
+H+ P + LQ L LS NQ+ +S + +L+ L L NAL+ L +F+
Sbjct: 303 NHITSLPDNVFSSLRQLQVLILSRNQISYISPDAFNGLVELQELSLHTNALQELDGNVFR 362
Query: 206 VSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGN 385
+ L + L+ NRL L + + L + L NQL LP + + L L L +
Sbjct: 363 MLTNLQNISLQNNRLRQLPGNIFANVNDLMTIQLQNNQLENLPLGIFDHLGKLCELRLYD 422
Query: 386 NQLQTLPPDLLRGPLKLEWLHLEGNRL 466
N + D+L PL WL L RL
Sbjct: 423 NPWR-CDSDIL--PLH-NWLLLNRARL 445
>ref|XP_003358804.1| PREDICTED: carboxypeptidase N subunit 2 [Sus scrofa].
Length = 547
Score = 123 bits (309), Expect = 2e-28
Identities = 94/298 (31%), Positives = 131/298 (43%), Gaps = 48/298 (16%)
Frame = +2
Query: 74 LQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLD 253
L+ L L NQL+ L P+ LK L+L +N L +LP LF +L TL L N L
Sbjct: 147 LESLQLQGNQLQTLPRHLFQPLRHLKTLNLAQNLLAQLPEELFHPLGSLETLRLSNNVLA 206
Query: 254 ILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLK 433
L L +L+ L L GN + LP ++ A L L L N ++ LPP +
Sbjct: 207 SLPKGVFGKLSSLQELFLDGNSISELPPEVFAQLPHLEKLWLQRNAIRQLPPAIFSSLGN 266
Query: 434 LEWLHLEGNRLQVLEEGFLAPQP------------------------KLRYLFLNNNKLT 541
L +L+L+GN L++L G A P L L L++N LT
Sbjct: 267 LTFLNLQGNALKMLPTGLFAHSPGLISLSLSHNQLEMVPEGAFANLSSLGSLTLSHNALT 326
Query: 542 TLAAGAFRG------------------------LQVLDMLDLSNNSLTSVPEGLWASLGK 649
L G FRG L L++L LS N LT++PEG++ +
Sbjct: 327 HLPTGVFRGLDGLVKLYLGYNNLTALHPALFQNLSKLELLSLSRNLLTTLPEGIFNT--- 383
Query: 650 AAGNMKVGFDISGNPWICDQKLDDLYRWLVANEDKMFFQNNTHCAGPKALEGQTLLAV 823
+ GNPW CD L L+ WL D++ F T+CAGP L+GQ + A+
Sbjct: 384 --NYNLFNLALHGNPWQCDCHLAYLFNWLHQFSDRL-FNIQTYCAGPAYLKGQVVPAL 438
Score = 96.3 bits (238), Expect = 3e-20
Identities = 65/199 (32%), Positives = 93/199 (46%)
Frame = +2
Query: 50 RKTEGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTL 229
R G PNL ++ N Q+ +P+L+ L++T A L +F A+L
Sbjct: 67 RAFSGSPNLTKVVFLNTQVCHFGPDAFGGLPRLQDLEITGGAFSNLSSNIFSNLASLVKF 126
Query: 230 VLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPP 409
L N+L+ L + AL L L GNQL+TLPR L L L+L N L LP
Sbjct: 127 TLNFNKLEALPEGLFGHMDALESLQLQGNQLQTLPRHLFQPLRHLKTLNLAQNLLAQLPE 186
Query: 410 DLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDML 589
+L LE L L N L L +G L+ LFL+ N ++ L F L L+ L
Sbjct: 187 ELFHPLGSLETLRLSNNVLASLPKGVFGKLSSLQELFLDGNSISELPPEVFAQLPHLEKL 246
Query: 590 DLSNNSLTSVPEGLWASLG 646
L N++ +P +++SLG
Sbjct: 247 WLQRNAIRQLPPAIFSSLG 265
Score = 95.5 bits (236), Expect = 4e-20
Identities = 64/192 (33%), Positives = 92/192 (47%)
Frame = +2
Query: 62 GIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKE 241
G+P LQ+L ++ +LS+ + L L N L+ LP GLF AL +L L+
Sbjct: 95 GLPRLQDLEITGGAFSNLSSNIFSNLASLVKFTLNFNKLEALPEGLFGHMDALESLQLQG 154
Query: 242 NRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLR 421
N+L L + L+ L+ L+L+ N L LP +L L L L NN L +LP +
Sbjct: 155 NQLQTLPRHLFQPLRHLKTLNLAQNLLAQLPEELFHPLGSLETLRLSNNVLASLPKGVFG 214
Query: 422 GPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSN 601
L+ L L+GN + L A P L L+L N + L F L L L+L
Sbjct: 215 KLSSLQELFLDGNSISELPPEVFAQLPHLEKLWLQRNAIRQLPPAIFSSLGNLTFLNLQG 274
Query: 602 NSLTSVPEGLWA 637
N+L +P GL+A
Sbjct: 275 NALKMLPTGLFA 286
Score = 67.0 bits (162), Expect = 2e-11
Identities = 52/157 (33%), Positives = 70/157 (44%), Gaps = 1/157 (0%)
Frame = +2
Query: 278 GLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEG 457
GL L+ L+++G L + +N L L N+L+ LP L LE L L+G
Sbjct: 95 GLPRLQDLEITGGAFSNLSSNIFSNLASLVKFTLNFNKLEALPEGLFGHMDALESLQLQG 154
Query: 458 NRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWA 637
N+LQ L P L+ L L N L L F L L+ L LSNN L S+P+G++
Sbjct: 155 NQLQTLPRHLFQPLRHLKTLNLAQNLLAQLPEELFHPLGSLETLRLSNNVLASLPKGVFG 214
Query: 638 SLGKAAGNMKVGFDISGNPWICDQKLDDLYR-WLVAN 745
L G IS P +L L + WL N
Sbjct: 215 KLSSLQELFLDGNSISELPPEVFAQLPHLEKLWLQRN 251
Score = 62.8 bits (151), Expect = 3e-10
Identities = 47/133 (35%), Positives = 58/133 (43%)
Frame = +2
Query: 71 NLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRL 250
NL L+L N L+ L P L L L+ N L+ +P G F ++L +L L N L
Sbjct: 266 NLTFLNLQGNALKMLPTGLFAHSPGLISLSLSHNQLEMVPEGAFANLSSLGSLTLSHNAL 325
Query: 251 DILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPL 430
L RGL L L L N L L L N + L +L L N L TLP +
Sbjct: 326 THLPTGVFRGLDGLVKLYLGYNNLTALHPALFQNLSKLELLSLSRNLLTTLPEGIFNTNY 385
Query: 431 KLEWLHLEGNRLQ 469
L L L GN Q
Sbjct: 386 NLFNLALHGNPWQ 398
Score = 53.1 bits (126), Expect = 2e-07
Identities = 47/133 (35%), Positives = 58/133 (43%)
Frame = +2
Query: 68 PNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENR 247
P L L LS+NQLE + + L L L+ NAL LP G+F+ L L L N
Sbjct: 289 PGLISLSLSHNQLEMVPEGAFANLSSLGSLTLSHNALTHLPTGVFRGLDGLVKLYLGYNN 348
Query: 248 LDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGP 427
L L + + L L L LS N L TLP + +L L L N Q D
Sbjct: 349 LTALHPALFQNLSKLELLSLSRNLLTTLPEGIFNTNYNLFNLALHGNPWQC---DCHLAY 405
Query: 428 LKLEWLHLEGNRL 466
L WLH +RL
Sbjct: 406 L-FNWLHQFSDRL 417
>ref|NP_001041651.1| insulin-like growth factor-binding protein complex acid labile
subunit [Sus scrofa].
Length = 606
Score = 106 bits (265), Expect = 2e-23
Identities = 72/202 (35%), Positives = 105/202 (51%)
Frame = +2
Query: 44 PRRKTEGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALH 223
P G+ NL+EL L+ N+L L + +L+ LDL+RNAL+ + +F L
Sbjct: 186 PDTAFHGLANLRELVLAGNKLTYLQPALFCGLGELRELDLSRNALRSVKANVFVKLPKLQ 245
Query: 224 TLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTL 403
L L N L + G+KALR LDLS N++ L LH+L L +N L +L
Sbjct: 246 KLYLDHNLLAAVAPGAFLGMKALRWLDLSHNRVGGLLEDTFPGLLGLHVLRLAHNALASL 305
Query: 404 PPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLD 583
P + LE L L NRL+ L E +L L LN+N++ + AGAF GL +
Sbjct: 306 RPRTFKDLHFLEELQLGHNRLRQLPEKAFEGLGQLEVLALNDNQIQEIKAGAFLGLFNVA 365
Query: 584 MLDLSNNSLTSVPEGLWASLGK 649
+++LS N L ++PE ++ LGK
Sbjct: 366 VMNLSGNCLRNLPEQVFRGLGK 387
Score = 105 bits (262), Expect = 4e-23
Identities = 90/289 (31%), Positives = 130/289 (44%), Gaps = 25/289 (8%)
Frame = +2
Query: 23 GHHVLLE-PRRKTEGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGL 199
GH+ L + P + EG+ L+ L L++NQ++++ A L + + V++L+ N L+ LP +
Sbjct: 322 GHNRLRQLPEKAFEGLGQLEVLALNDNQIQEIKAGAFLGLFNVAVMNLSGNCLRNLPEQV 381
Query: 200 FKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDL 379
F+ LH+L L+ + L + GL LR L L N L + + L +L LDL
Sbjct: 382 FRGLGKLHSLHLEHSCLGRVGLHTFAGLSGLRRLFLKDNGLEAIDEQSLWGLAELLELDL 441
Query: 380 GNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGA 559
N+L LP L +G KLE+L L NRL L L P + +L +++N+L L
Sbjct: 442 TANRLTHLPGRLFQGLGKLEYLLLSRNRLSALPADALGPLQRTFWLDVSHNRLQALPEAV 501
Query: 560 FRGLQVLDMLDLSNNSL-TSVP-----EGLWASLGKAAGNMKVGFDISGNPWICDQKLDD 721
L L L L NNSL T VP E LW + GNPW C L
Sbjct: 502 LAPLGQLRYLSLRNNSLRTFVPQPLGLERLW---------------LEGNPWDCGCPLRA 546
Query: 722 L--------------YRWLVANED----KMFFQNNTHCAGPKALEGQTL 814
L R + +D + NN CA P A+ G L
Sbjct: 547 LRALALQHPAVVPRFVRAVAEGDDDRQPPAYAYNNITCASPPAVSGLDL 595
Score = 97.1 bits (240), Expect = 2e-20
Identities = 70/194 (36%), Positives = 99/194 (51%)
Frame = +2
Query: 38 LEPRRKTEGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAA 217
LEP+ G+ NL LHL NQL L+A L P L L L N L R+ GLF+
Sbjct: 113 LEPQALL-GLQNLYHLHLERNQLRSLAAHTFLHTPGLASLGLHNNLLSRVEEGLFQGLTN 171
Query: 218 LHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQ 397
L L L N L +L + GL LR L L+GN+L L L +L LDL N L+
Sbjct: 172 LWDLNLGWNSLAVLPDTAFHGLANLRELVLAGNKLTYLQPALFCGLGELRELDLSRNALR 231
Query: 398 TLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQV 577
++ ++ KL+ L+L+ N L + G LR+L L++N++ L F GL
Sbjct: 232 SVKANVFVKLPKLQKLYLDHNLLAAVAPGAFLGMKALRWLDLSHNRVGGLLEDTFPGLLG 291
Query: 578 LDMLDLSNNSLTSV 619
L +L L++N+L S+
Sbjct: 292 LHVLRLAHNALASL 305
Score = 85.1 bits (209), Expect = 6e-17
Identities = 71/219 (32%), Positives = 95/219 (43%), Gaps = 24/219 (10%)
Frame = +2
Query: 65 IPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKEN 244
+P LQ+L+L +N L ++ L + L+ LDL+ N + L F LH L L N
Sbjct: 241 LPKLQKLYLDHNLLAAVAPGAFLGMKALRWLDLSHNRVGGLLEDTFPGLLGLHVLRLAHN 300
Query: 245 RLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQ--------- 397
L L + L L L L N+LR LP K L +L L +NQ+Q
Sbjct: 301 ALASLRPRTFKDLHFLEELQLGHNRLRQLPEKAFEGLGQLEVLALNDNQIQEIKAGAFLG 360
Query: 398 ---------------TLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNN 532
LP + RG KL LHLE + L + A LR LFL +N
Sbjct: 361 LFNVAVMNLSGNCLRNLPEQVFRGLGKLHSLHLEHSCLGRVGLHTFAGLSGLRRLFLKDN 420
Query: 533 KLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASLGK 649
L + + GL L LDL+ N LT +P L+ LGK
Sbjct: 421 GLEAIDEQSLWGLAELLELDLTANRLTHLPGRLFQGLGK 459
Score = 76.3 bits (186), Expect = 3e-14
Identities = 61/167 (36%), Positives = 79/167 (47%)
Frame = +2
Query: 149 KVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRT 328
+ L L N +P G F+ ++L L L+ + L L+ L GL+ L HL L NQLR+
Sbjct: 77 RALWLDSNNFSSVPAGAFRNLSSLGFLNLQGSGLASLEPQALLGLQNLYHLHLERNQLRS 136
Query: 329 LPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKL 508
L + L L L NN L + L +G L L+L N L VL + L
Sbjct: 137 LAAHTFLHTPGLASLGLHNNLLSRVEEGLFQGLTNLWDLNLGWNSLAVLPDTAFHGLANL 196
Query: 509 RYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASLGK 649
R L L NKLT L F GL L LDLS N+L SV ++ L K
Sbjct: 197 RELVLAGNKLTYLQPALFCGLGELRELDLSRNALRSVKANVFVKLPK 243
Score = 62.8 bits (151), Expect = 3e-10
Identities = 56/169 (33%), Positives = 75/169 (44%)
Frame = +2
Query: 143 QLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQL 322
+L V +RN L +LP G + A L L N + A R L +L L+L G+ L
Sbjct: 55 ELSVFCSSRN-LTQLPDG---IPDAARALWLDSNNFSSVPAGAFRNLSSLGFLNLQGSGL 110
Query: 323 RTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQP 502
+L + L +L+ L L NQL++L L L L N L +EEG
Sbjct: 111 ASLEPQALLGLQNLYHLHLERNQLRSLAAHTFLHTPGLASLGLHNNLLSRVEEGLFQGLT 170
Query: 503 KLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASLGK 649
L L L N L L AF GL L L L+ N LT + L+ LG+
Sbjct: 171 NLWDLNLGWNSLAVLPDTAFHGLANLRELVLAGNKLTYLQPALFCGLGE 219
>ref|XP_003125026.2| PREDICTED: leucine-rich repeat transmembrane neuronal protein 4
isoform 2 [Sus scrofa].
Length = 590
Score = 106 bits (264), Expect = 2e-23
Identities = 78/253 (30%), Positives = 120/253 (47%), Gaps = 3/253 (1%)
Frame = +2
Query: 59 EGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLK 238
+GI L+EL LS+N++ L K PVP L+ LDL+ N L+ L FK L L L+
Sbjct: 106 QGIRRLKELILSSNKITYLHNKTFHPVPNLRSLDLSYNKLQTLQSEQFKGLRKLIILHLR 165
Query: 239 ENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLL 418
N L + + + L LDL N+LR+L R A L L L +NQ +
Sbjct: 166 SNSLKTVPIRVFQDCRNLDFLDLGYNRLRSLSRNAFAGLLKLKELHLEHNQFSKINFAHF 225
Query: 419 RGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLS 598
L ++L+ NR++ + +G L L L+ N + + G F+ L L L+L
Sbjct: 226 PRLFNLRSIYLQWNRIRSISQGLTWTWSSLHNLDLSGNDIQGIEPGTFKCLPNLQKLNLD 285
Query: 599 NNSLTSVPE---GLWASLGKAAGNMKVGFDISGNPWICDQKLDDLYRWLVANEDKMFFQN 769
+N LT++ + W SL + +SGN W C + + L+ WL K ++
Sbjct: 286 SNKLTNISQETVNAWISL--------ISITLSGNMWECTRSICPLFYWL--KNFKGNKES 335
Query: 770 NTHCAGPKALEGQ 808
CAGPK ++G+
Sbjct: 336 TMICAGPKHIQGE 348
Score = 48.1 bits (113), Expect = 8e-06
Identities = 47/196 (23%), Positives = 82/196 (41%), Gaps = 2/196 (1%)
Frame = +2
Query: 20 RGHHVLLEPRRKTEGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGL 199
R + + P R + NL L L N+L LS + +LK L L N ++
Sbjct: 165 RSNSLKTVPIRVFQDCRNLDFLDLGYNRLRSLSRNAFAGLLKLKELHLEHNQFSKINFAH 224
Query: 200 FKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDL 379
F L ++ L+ NR+ + +L +LDLSGN ++ + +L L+L
Sbjct: 225 FPRLFNLRSIYLQWNRIRSISQGLTWTWSSLHNLDLSGNDIQGIEPGTFKCLPNLQKLNL 284
Query: 380 GNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGA 559
+N+L + + + + L + L GN + + P F N + T + AG
Sbjct: 285 DSNKLTNISQETVNAWISLISITLSGNMWECTRS--ICPLFYWLKNFKGNKESTMICAGP 342
Query: 560 --FRGLQVLDMLDLSN 601
+G +V D ++ N
Sbjct: 343 KHIQGEKVSDAVETYN 358
>ref|XP_003125025.2| PREDICTED: leucine-rich repeat transmembrane neuronal protein 4
isoform 1 [Sus scrofa].
Length = 590
Score = 106 bits (264), Expect = 2e-23
Identities = 78/253 (30%), Positives = 120/253 (47%), Gaps = 3/253 (1%)
Frame = +2
Query: 59 EGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLK 238
+GI L+EL LS+N++ L K PVP L+ LDL+ N L+ L FK L L L+
Sbjct: 106 QGIRRLKELILSSNKITYLHNKTFHPVPNLRSLDLSYNKLQTLQSEQFKGLRKLIILHLR 165
Query: 239 ENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLL 418
N L + + + L LDL N+LR+L R A L L L +NQ +
Sbjct: 166 SNSLKTVPIRVFQDCRNLDFLDLGYNRLRSLSRNAFAGLLKLKELHLEHNQFSKINFAHF 225
Query: 419 RGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLS 598
L ++L+ NR++ + +G L L L+ N + + G F+ L L L+L
Sbjct: 226 PRLFNLRSIYLQWNRIRSISQGLTWTWSSLHNLDLSGNDIQGIEPGTFKCLPNLQKLNLD 285
Query: 599 NNSLTSVPE---GLWASLGKAAGNMKVGFDISGNPWICDQKLDDLYRWLVANEDKMFFQN 769
+N LT++ + W SL + +SGN W C + + L+ WL K ++
Sbjct: 286 SNKLTNISQETVNAWISL--------ISITLSGNMWECTRSICPLFYWL--KNFKGNKES 335
Query: 770 NTHCAGPKALEGQ 808
CAGPK ++G+
Sbjct: 336 TMICAGPKHIQGE 348
Score = 48.1 bits (113), Expect = 8e-06
Identities = 47/196 (23%), Positives = 82/196 (41%), Gaps = 2/196 (1%)
Frame = +2
Query: 20 RGHHVLLEPRRKTEGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGL 199
R + + P R + NL L L N+L LS + +LK L L N ++
Sbjct: 165 RSNSLKTVPIRVFQDCRNLDFLDLGYNRLRSLSRNAFAGLLKLKELHLEHNQFSKINFAH 224
Query: 200 FKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDL 379
F L ++ L+ NR+ + +L +LDLSGN ++ + +L L+L
Sbjct: 225 FPRLFNLRSIYLQWNRIRSISQGLTWTWSSLHNLDLSGNDIQGIEPGTFKCLPNLQKLNL 284
Query: 380 GNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGA 559
+N+L + + + + L + L GN + + P F N + T + AG
Sbjct: 285 DSNKLTNISQETVNAWISLISITLSGNMWECTRS--ICPLFYWLKNFKGNKESTMICAGP 342
Query: 560 --FRGLQVLDMLDLSN 601
+G +V D ++ N
Sbjct: 343 KHIQGEKVSDAVETYN 358
>ref|XP_003132649.1| PREDICTED: platelet glycoprotein V-like [Sus scrofa].
Length = 569
Score = 102 bits (255), Expect = 3e-22
Identities = 76/218 (34%), Positives = 100/218 (45%), Gaps = 25/218 (11%)
Frame = +2
Query: 71 NLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRL 250
+LQEL L+ NQ L A + LK+LDL+ N L LP GLF L L+L N+L
Sbjct: 147 SLQELFLNQNQFAFLPASLFAHLENLKLLDLSGNNLTHLPKGLFGAQVKLEKLLLHSNQL 206
Query: 251 DILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPL 430
LD+ L L+AL+ L L N +R++ L L L N+L+ LP L
Sbjct: 207 VSLDSGLLDSLRALKELQLDSNHIRSVAPGAFDRLRSLSSLTLARNRLEGLPSALFLHSR 266
Query: 431 KLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAG------------------ 556
L +L L N L+ L E L+ L+LN +L TL A
Sbjct: 267 SLTFLTLFENPLEELPEVLFGEMGGLQELWLNGTQLLTLPAAVFRNLSGLWVLRVTLSPR 326
Query: 557 -------AFRGLQVLDMLDLSNNSLTSVPEGLWASLGK 649
AFRGL L +L LS+N L S+P GL LG+
Sbjct: 327 LSALPEDAFRGLGELRVLALSSNGLASLPAGLLRGLGR 364
Score = 101 bits (251), Expect = 8e-22
Identities = 68/191 (35%), Positives = 99/191 (51%)
Frame = +2
Query: 62 GIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKE 241
G+ LQ L LS++ + ++ L + +LK L L+RN + LP L L L L
Sbjct: 72 GMTVLQRLMLSDSHVTAIAPGTLNDLIKLKTLRLSRNKITHLPGALLDKLVLLEQLFLDG 131
Query: 242 NRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLR 421
N L LD + + L +L+ L L+ NQ LP L A+ +L +LDL N L LP L
Sbjct: 132 NELKSLDQNMFQKLVSLQELFLNQNQFAFLPASLFAHLENLKLLDLSGNNLTHLPKGLFG 191
Query: 422 GPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSN 601
+KLE L L N+L L+ G L L+ L L++N + ++A GAF L+ L L L+
Sbjct: 192 AQVKLEKLLLHSNQLVSLDSGLLDSLRALKELQLDSNHIRSVAPGAFDRLRSLSSLTLAR 251
Query: 602 NSLTSVPEGLW 634
N L +P L+
Sbjct: 252 NRLEGLPSALF 262
Score = 83.2 bits (204), Expect = 2e-16
Identities = 64/191 (33%), Positives = 90/191 (47%)
Frame = +2
Query: 74 LQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLD 253
L+ L LS N++ L L + L+ L L N LK L +F+ +L L L +N+
Sbjct: 100 LKTLRLSRNKITHLPGALLDKLVLLEQLFLDGNELKSLDQNMFQKLVSLQELFLNQNQFA 159
Query: 254 ILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLK 433
L AS L+ L+ LDLSGN L LP+ L L L L +NQL +L LL
Sbjct: 160 FLPASLFAHLENLKLLDLSGNNLTHLPKGLFGAQVKLEKLLLHSNQLVSLDSGLLDSLRA 219
Query: 434 LEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLT 613
L+ L L+ N ++ + G L L L N+L L + F + L L L N L
Sbjct: 220 LKELQLDSNHIRSVAPGAFDRLRSLSSLTLARNRLEGLPSALFLHSRSLTFLTLFENPLE 279
Query: 614 SVPEGLWASLG 646
+PE L+ +G
Sbjct: 280 ELPEVLFGEMG 290
Score = 76.6 bits (187), Expect = 2e-14
Identities = 51/118 (43%), Positives = 63/118 (53%), Gaps = 1/118 (0%)
Frame = +2
Query: 74 LQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNA-LKRLPPGLFKVSAALHTLVLKENRL 250
LQEL L+ QL L A + L VL +T + L LP F+ L L L N L
Sbjct: 292 LQELWLNGTQLLTLPAAVFRNLSGLWVLRVTLSPRLSALPEDAFRGLGELRVLALSSNGL 351
Query: 251 DILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRG 424
L A LRGL LRH+ L N+LRTLPR L N + L + L +NQL+TLP D+ G
Sbjct: 352 ASLPAGLLRGLGRLRHVSLRRNRLRTLPRALFHNLSSLAEVQLDHNQLETLPGDMFEG 409
Score = 71.2 bits (173), Expect = 9e-13
Identities = 47/140 (33%), Positives = 74/140 (52%)
Frame = +2
Query: 221 HTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQT 400
H L+ + R + + S+ G+ L+ L LS + + + L + L L L N++
Sbjct: 54 HLLLFRMGRGALQNHSF-SGMTVLQRLMLSDSHVTAIAPGTLNDLIKLKTLRLSRNKITH 112
Query: 401 LPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVL 580
LP LL + LE L L+GN L+ L++ L+ LFLN N+ L A F L+ L
Sbjct: 113 LPGALLDKLVLLEQLFLDGNELKSLDQNMFQKLVSLQELFLNQNQFAFLPASLFAHLENL 172
Query: 581 DMLDLSNNSLTSVPEGLWAS 640
+LDLS N+LT +P+GL+ +
Sbjct: 173 KLLDLSGNNLTHLPKGLFGA 192
Score = 63.2 bits (152), Expect = 2e-10
Identities = 55/171 (32%), Positives = 75/171 (43%), Gaps = 9/171 (5%)
Frame = +2
Query: 47 RRKTEGIPNLQELH--------LSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLF 202
R + EG+P+ LH L N LE+L + L+ L L L LP +F
Sbjct: 251 RNRLEGLPSALFLHSRSLTFLTLFENPLEELPEVLFGEMGGLQELWLNGTQLLTLPAAVF 310
Query: 203 KVSAALHTL-VLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDL 379
+ + L L V RL L RGL LR L LS N L +LP LL L + L
Sbjct: 311 RNLSGLWVLRVTLSPRLSALPEDAFRGLGELRVLALSSNGLASLPAGLLRGLGRLRHVSL 370
Query: 380 GNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNN 532
N+L+TLP L L + L+ N+L+ L P+L + L +N
Sbjct: 371 RRNRLRTLPRALFHNLSSLAEVQLDHNQLETLPGDMFEGLPQLAEVLLGHN 421
>ref|XP_001924493.1| PREDICTED: leucine-rich repeat transmembrane neuronal protein 3
[Sus scrofa].
Length = 581
Score = 99.4 bits (246), Expect = 3e-21
Identities = 75/281 (26%), Positives = 127/281 (45%), Gaps = 28/281 (9%)
Frame = +2
Query: 59 EGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLK 238
+G+ L L+L +N + ++ + +LK L L+ N + F+ L L L
Sbjct: 82 KGLNQLTWLYLDHNHISNIDENAFNGIRRLKELILSSNRISYFLNNTFRPVTNLRNLDLS 141
Query: 239 ENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLL 418
N+L L + RGL+ L L L N LRT+P ++ + +L +LDLG N++++L ++
Sbjct: 142 YNQLHSLGSEQFRGLRKLLSLHLRSNSLRTIPVRIFQDCRNLELLDLGYNRIRSLARNVF 201
Query: 419 RGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLA---AGAFRGLQVLDM- 586
G ++L+ LHLE N+ L L+ L+L NK++ + + + LQ LD+
Sbjct: 202 AGMIRLKELHLEHNQFSKLNLALFPRLVSLQNLYLQWNKISVIGQTMSWTWSSLQRLDLS 261
Query: 587 ---------------------LDLSNNSLTSVPEGL---WASLGKAAGNMKVGFDISGNP 694
L+L +N LT + + + W SL ++GN
Sbjct: 262 GNEIEAFSGPSVFQCVPNLQRLNLDSNKLTFIGQEILDSWISLN--------DISLAGNI 313
Query: 695 WICDQKLDDLYRWLVANEDKMFFQNNTHCAGPKALEGQTLL 817
W C + + L WL K +N CA PK L+G ++
Sbjct: 314 WECSRNICSLVNWL--KSFKGLRENTIICASPKELQGVNVI 352
Score = 69.3 bits (168), Expect = 3e-12
Identities = 50/163 (30%), Positives = 74/163 (45%)
Frame = +2
Query: 155 LDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLP 334
L L N+L++L FK L L L N + +D + G++ L+ L LS N++
Sbjct: 66 LSLRYNSLQKLKYNQFKGLNQLTWLYLDHNHISNIDENAFNGIRRLKELILSSNRISYFL 125
Query: 335 RKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRY 514
T+L LDL NQL +L + RG KL LHL N L+ + L
Sbjct: 126 NNTFRPVTNLRNLDLSYNQLHSLGSEQFRGLRKLLSLHLRSNSLRTIPVRIFQDCRNLEL 185
Query: 515 LFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASL 643
L L N++ +LA F G+ L L L +N + + L+ L
Sbjct: 186 LDLGYNRIRSLARNVFAGMIRLKELHLEHNQFSKLNLALFPRL 228
Score = 50.4 bits (119), Expect = 2e-06
Identities = 37/140 (26%), Positives = 66/140 (47%), Gaps = 1/140 (0%)
Frame = +2
Query: 44 PRRKTEGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALH 223
P R + NL+ L L N++ L+ + +LK L L N +L LF +L
Sbjct: 173 PVRIFQDCRNLELLDLGYNRIRSLARNVFAGMIRLKELHLEHNQFSKLNLALFPRLVSLQ 232
Query: 224 TLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLP-RKLLANFTDLHILDLGNNQLQT 400
L L+ N++ ++ + +L+ LDLSGN++ + +L L+L +N+L
Sbjct: 233 NLYLQWNKISVIGQTMSWTWSSLQRLDLSGNEIEAFSGPSVFQCVPNLQRLNLDSNKLTF 292
Query: 401 LPPDLLRGPLKLEWLHLEGN 460
+ ++L + L + L GN
Sbjct: 293 IGQEILDSWISLNDISLAGN 312
>ref|XP_003124039.2| PREDICTED: leucine-rich repeat transmembrane neuronal protein 2
[Sus scrofa].
Length = 516
Score = 99.4 bits (246), Expect = 3e-21
Identities = 78/285 (27%), Positives = 126/285 (44%), Gaps = 19/285 (6%)
Frame = +2
Query: 20 RGHHVLLEPRRKTEGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGL 199
R +H+ R + L LHL +NQ+ + + +LK L L+ N + LP
Sbjct: 69 RHNHITELERDQFASFSQLTWLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLPNTT 128
Query: 200 FKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDL 379
F LH L L N+L L GL+ L+ L L N LRT+P +L + L LDL
Sbjct: 129 FTQLINLHNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEFLDL 188
Query: 380 GNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGA 559
N+L++L + G +KL LHLE N+L + L LFL NK++ L G
Sbjct: 189 STNRLRSLARNGFAGLIKLRELHLEHNQLTKINFAHFLRLSSLHTLFLQWNKISNLTCGM 248
Query: 560 FRGLQVLDMLDLSNNSLTSVPEGLWASLGK----AAGNMKVG---------------FDI 682
L+ LDL+ N + ++ ++ ++ N K+ +
Sbjct: 249 EWTWGTLEKLDLTGNEIKAIDSTVFETMPNLKILLMDNNKLNSLDAKLFNSLTSLTTVGL 308
Query: 683 SGNPWICDQKLDDLYRWLVANEDKMFFQNNTHCAGPKALEGQTLL 817
SGN W C ++ L WL + + + ++++ C P +G+ +L
Sbjct: 309 SGNLWECSPRICALASWLGSFQGR--WEHSILCHSPDHTQGEDIL 351
Score = 80.1 bits (196), Expect = 2e-15
Identities = 53/155 (34%), Positives = 74/155 (47%)
Frame = +2
Query: 155 LDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLP 334
L L N + L F + L L L N++ + +GL L+ L LS N++ LP
Sbjct: 66 LSLRHNHITELERDQFASFSQLTWLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLP 125
Query: 335 RKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRY 514
+LH LDL NQL +L P+L G KL+ LHL N L+ + L +
Sbjct: 126 NTTFTQLINLHNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEF 185
Query: 515 LFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSV 619
L L+ N+L +LA F GL L L L +N LT +
Sbjct: 186 LDLSTNRLRSLARNGFAGLIKLRELHLEHNQLTKI 220
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 28,409,433
Number of extensions: 898583
Number of successful extensions: 6561
Number of sequences better than 1.0e-05: 150
Number of HSP's gapped: 5595
Number of HSP's successfully gapped: 464
Length of query: 352
Length of database: 11,343,932
Length adjustment: 100
Effective length of query: 252
Effective length of database: 8,854,232
Effective search space: 2231266464
Effective search space used: 2231266464
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-001977
(1058 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr02 1951 0.0
>Sscrofa_Chr02
|| Length = 162569375
Score = 1951 bits (984), Expect = 0.0
Identities = 996/999 (99%), Gaps = 1/999 (0%)
Strand = Plus / Plus
Query: 60 agggcatccctaacctccaggaactgcacctttccaacaaccagctggaggacctttcag 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74794186 agggcatccctaacctccaggaactgcacctttccaacaaccagctggaggacctttcag 74794245
Query: 120 ccaagttcctgctgcctgtgcctcagctaaaggtgctcgatctgacccgcaacgccctga 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74794246 ccaagttcctgctgcctgtgcctcagctaaaggtgctcgatctgacccgcaacgccctga 74794305
Query: 180 aacgcctgccccctggcctcttcaaggtctcggctgccctccacaccctggtgctgaagg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74794306 aacgcctgccccctggcctcttcaaggtctcggctgccctccacaccctggtgctgaagg 74794365
Query: 240 aaaaccggctagacattctggacgcctcgtggctacgtggcctgaaagccctcaggcatc 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74794366 aaaaccggctagacattctggacgcctcgtggctacgtggcctgaaagccctcaggcatc 74794425
Query: 300 tggacttgtcagggaaccagctccggacactgccccgcaagctgctggccaacttcactg 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74794426 tggacttgtcagggaaccagctccggacactgccccgcaagctgctggccaacttcactg 74794485
Query: 360 acctgcacatccttgaccttggcaataaccagctgcagactttgccccctgacctcctga 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74794486 acctgcacatccttgaccttggcaataaccagctgcagactttgccccctgacctcctga 74794545
Query: 420 ggggccccttgaagttggaatggctgcaccttgagggcaatagattgcaggtgctcgaag 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74794546 ggggccccttgaagttggaatggctgcaccttgagggcaatagattgcaggtgctcgaag 74794605
Query: 480 agggctttctggcgccccagccaaaactgcgctacctttttctaaacaacaacaagctga 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74794606 agggctttctggcgccccagccaaaactgcgctacctttttctaaacaacaacaagctga 74794665
Query: 540 ccacgctggcagctggtgctttccgaggtctgcaggtgctggacatgctggacctctcca 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74794666 ccacgctggcagctggtgctttccgaggtctgcaggtgctggacatgctggacctctcca 74794725
Query: 600 acaactcactgaccagtgttcccgaggggctctgggcatccttgggaaaggctgccggca 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74794726 acaactcactgaccagtgttcccgaggggctctgggcatccttgggaaaggctgccggca 74794785
Query: 660 acatgaaggttggttttgacatctcagggaacccctggatctgtgaccagaaactagatg 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74794786 acatgaaggttggttttgacatctcagggaacccctggatctgtgaccagaaactagatg 74794845
Query: 720 acctctatcggtggcttgtggccaacgaagacaagatgtttttccagaacaacactcact 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74794846 acctctatcggtggcttgtggccaacgaagacaagatgtttttccagaacaacactcact 74794905
Query: 780 gtgctggccccaaagccttggagggccagacgctcctggcagtggctgcgtctcttgagg 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74794906 gtgctggccccaaagccttggagggccagacgctcctggcagtggctgcgtctcttgagg 74794965
Query: 840 cctagggctagggttagggtggggaggcggggtttggcagaacaccgcacccccttaaat 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74794966 cctagggctagggttagggtggggaggcggggtttggcagaacaccgcacccccttaaat 74795025
Query: 900 aattccaccttctaagggtgtgagactgggaccacccatagttgctggggcccctgtcgc 959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74795026 aattccaccttctaagggtgtgagactgggaccacccatagttgctggggcccctgtcgc 74795085
Query: 960 tcacgcctcccaccttggcctcttcctgcctccttgctgttgctcnagctgtatcccctt 1019
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 74795086 tcacgcctcccaccttggcctcttcctgcctccttgctgttgctcaagctgtatcccctt 74795145
Query: 1020 ccagaaatgccttttcctccattttccagatcttttggt 1058
||||||||||| |||||||||||| ||||||||||||||
Sbjct: 74795146 ccagaaatgcc-tttcctccatttcccagatcttttggt 74795183
Score = 115 bits (58), Expect = 5e-23
Identities = 58/58 (100%)
Strand = Plus / Plus
Query: 5 ctagatggaaaagggagaggccaccatgtcctcttggagcccagaaggaaaacagagg 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74792902 ctagatggaaaagggagaggccaccatgtcctcttggagcccagaaggaaaacagagg 74792959
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 31,413,914
Number of extensions: 230
Number of successful extensions: 230
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 229
Number of HSP's successfully gapped: 2
Length of query: 1058
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 1037
Effective length of database: 2,808,413,156
Effective search space: 2912324442772
Effective search space used: 2912324442772
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)