Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-001980
(1207 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001039642.1| leucine-rich alpha-2-glycoprotein [Bos tauru... 466 e-131
Alignment gi|NP_001094702.1| carboxypeptidase N subunit 2 [Bos taurus]. 120 2e-27
Alignment gi|NP_001069431.1| insulin-like growth factor-binding protein c... 109 4e-24
Alignment gi|XP_002684904.1| PREDICTED: glycoprotein V (platelet) [Bos ta... 108 1e-23
Alignment gi|XP_002691418.1| PREDICTED: leucine rich repeat transmembrane... 100 3e-21
Alignment gi|XP_876920.3| PREDICTED: leucine rich repeat transmembrane ne... 100 3e-21
Alignment gi|NP_001096753.1| leucine-rich repeat transmembrane neuronal p... 100 4e-21
Alignment gi|XP_002696352.1| PREDICTED: leucine rich repeat containing 70... 99 8e-21
Alignment gi|XP_002702544.1| PREDICTED: leucine rich repeat containing 70... 99 8e-21
Alignment gi|XP_002688798.1| PREDICTED: Podnl1 protein-like [Bos taurus]. 98 1e-20
>ref|NP_001039642.1| leucine-rich alpha-2-glycoprotein [Bos taurus].
Length = 346
Score = 466 bits (1200), Expect = e-131
Identities = 241/338 (71%), Positives = 269/338 (79%)
Frame = +1
Query: 64 MSSWSPEGKQSPGSWEPHLCRIXXXXXXXXXSAKGVTPDPNACLVFHSSNGSSISCQPPA 243
MSS +PE KQS W+ HL RI SA+G+TP+P ACLVF S NGSSISCQPPA
Sbjct: 1 MSSQNPERKQSLVGWDSHLSRIFLLLLFVV-SAQGLTPNPEACLVFSSVNGSSISCQPPA 59
Query: 244 KFPHYLPADTIYLATEFFNLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKV 423
+ PH LPADTI+LA EFFNLTQ+PAD LQG+PNLQELHLS+N+LED S KFLLPVPQLKV
Sbjct: 60 QIPHSLPADTIFLAVEFFNLTQLPADFLQGVPNLQELHLSSNRLEDFSPKFLLPVPQLKV 119
Query: 424 LDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLP 603
LDLTRN+L L PG F+VSAAL TLVLK N+L L+ASWL GLKALRHLDLS NQL +LP
Sbjct: 120 LDLTRNSLTGLFPGFFRVSAALCTLVLKGNQLKFLEASWLHGLKALRHLDLSENQLHSLP 179
Query: 604 RKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRY 783
LL NFTDL LDL NNQLQTLPPDLLRGPL LE LHLEGNRLQVL EG LAPQPKLRY
Sbjct: 180 PGLLENFTDLLTLDLSNNQLQTLPPDLLRGPLNLERLHLEGNRLQVLGEGLLAPQPKLRY 239
Query: 784 LFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASLGKAAGNMKVGFEISGNP 963
LFLN+N+L ++AAGAFRGLQ LDMLDLSNN LT+VP GLW SLGKAA N+K GF+IS NP
Sbjct: 240 LFLNDNRLASVAAGAFRGLQKLDMLDLSNNLLTTVPTGLWTSLGKAARNLKDGFDISNNP 299
Query: 964 WICDQKLNDLYRWLCGQRKTRCFFQNNTSLCWPQKALG 1077
WICDQ L DLYRWL + + FF+N+T P+ G
Sbjct: 300 WICDQNLADLYRWLVA-NENKMFFRNHTRCAGPEALKG 336
>ref|NP_001094702.1| carboxypeptidase N subunit 2 [Bos taurus].
Length = 548
Score = 120 bits (302), Expect = 2e-27
Identities = 87/264 (32%), Positives = 120/264 (45%)
Frame = +1
Query: 214 GSSISCQPPAKFPHYLPADTIYLATEFFNLTQMPADILQGIPNLQELHLSNNQLEDLSAK 393
G+ + P F T+ LA L +P ++ + LQ L LSNNQL L
Sbjct: 154 GNRLQTLPQRLFQPLRCLKTLNLAQNL--LAYLPEELFHPLGRLQTLRLSNNQLASLPRG 211
Query: 394 FLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLD 573
+ L+ L L N++ LPP +F + L L L+ N + L S L L L
Sbjct: 212 LFSRLGSLQELFLDGNSISELPPEVFAQLSCLEKLWLQHNAIGHLPGSVFSALPNLTFLS 271
Query: 574 LSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEG 753
L GN L+TLP L L L L +NQL+T+P L L L N L L G
Sbjct: 272 LQGNALQTLPAGLFTQSPGLVSLSLSHNQLETVPEAAFANLTSLGSLMLSHNALTHLPAG 331
Query: 754 FLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASLGKAAGNM 933
L L+L++N LT L F+ L L++L LS N LT++PEG++ + +
Sbjct: 332 VFRGLKGLVKLYLSSNNLTVLHPALFQNLSKLELLSLSRNLLTTLPEGIFDT-----NDN 386
Query: 934 KVGFEISGNPWICDQKLNDLYRWL 1005
+ GNPW CD L L+ WL
Sbjct: 387 LFNLALYGNPWQCDCHLAYLFSWL 410
Score = 100 bits (249), Expect = 3e-21
Identities = 73/205 (35%), Positives = 97/205 (47%)
Frame = +1
Query: 298 NLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKV 477
N + ADI + +L + L+ N LE L + L+ L L N L+ LP LF+
Sbjct: 108 NFSNFSADIFSNLISLSKFTLNFNMLEALPEGLFQHMDGLESLQLQGNRLQTLPQRLFQP 167
Query: 478 SAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNN 657
L TL L +N L L L L+ L LS NQL +LPR L + L L L N
Sbjct: 168 LRCLKTLNLAQNLLAYLPEELFHPLGRLQTLRLSNNQLASLPRGLFSRLGSLQELFLDGN 227
Query: 658 QLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRG 837
+ LPP++ LE L L+ N + L + P L +L L N L TL AG F
Sbjct: 228 SISELPPEVFAQLSCLEKLWLQHNAIGHLPGSVFSALPNLTFLSLQGNALQTLPAGLFTQ 287
Query: 838 LQVLDMLDLSNNSLTSVPEGLWASL 912
L L LS+N L +VPE +A+L
Sbjct: 288 SPGLVSLSLSHNQLETVPEAAFANL 312
Score = 96.3 bits (238), Expect = 5e-20
Identities = 87/295 (29%), Positives = 123/295 (41%), Gaps = 26/295 (8%)
Frame = +1
Query: 97 PGSWEPHLCRIXXXXXXXXXSAKGVTPDPNAC-----LVFHSSNGSSISCQPPAKFPHYL 261
PG+W C + A+ P P C VF S G ++ P PH
Sbjct: 3 PGAWLCWACLLLL--------ARPTLPCPQGCDCFIREVFCSDEG--LAAVPLDIPPH-- 50
Query: 262 PADTIYLATEFF-----------NLTQMP----------ADILQGIPNLQELHLSNNQLE 378
D I++ T F NLT++ D G+P LQ+L ++
Sbjct: 51 ATDIIFVETSFTVVGSRAFSSSPNLTKVVFLNTRVCHFRPDAFGGLPGLQDLEITGGNFS 110
Query: 379 DLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKA 558
+ SA + L L N L+ LP GLF+ L +L L+ NRL L + L+
Sbjct: 111 NFSADIFSNLISLSKFTLNFNMLEALPEGLFQHMDGLESLQLQGNRLQTLPQRLFQPLRC 170
Query: 559 LRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQ 738
L+ L+L+ N L LP +L L L L NNQL +LP L L+ L L+GN +
Sbjct: 171 LKTLNLAQNLLAYLPEELFHPLGRLQTLRLSNNQLASLPRGLFSRLGSLQELFLDGNSIS 230
Query: 739 VLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLW 903
L A L L+L +N + L F L L L L N+L ++P GL+
Sbjct: 231 ELPPEVFAQLSCLEKLWLQHNAIGHLPGSVFSALPNLTFLSLQGNALQTLPAGLF 285
Score = 70.5 bits (171), Expect = 3e-12
Identities = 54/165 (32%), Positives = 70/165 (42%)
Frame = +1
Query: 469 FKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDL 648
F S L +V R+ GL L+ L+++G + +N L L
Sbjct: 69 FSSSPNLTKVVFLNTRVCHFRPDAFGGLPGLQDLEITGGNFSNFSADIFSNLISLSKFTL 128
Query: 649 GNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGA 828
N L+ LP L + LE L L+GNRLQ L + P L+ L L N L L
Sbjct: 129 NFNMLEALPEGLFQHMDGLESLQLQGNRLQTLPQRLFQPLRCLKTLNLAQNLLAYLPEEL 188
Query: 829 FRGLQVLDMLDLSNNSLTSVPEGLWASLGKAAGNMKVGFEISGNP 963
F L L L LSNN L S+P GL++ LG G IS P
Sbjct: 189 FHPLGRLQTLRLSNNQLASLPRGLFSRLGSLQELFLDGNSISELP 233
>ref|NP_001069431.1| insulin-like growth factor-binding protein complex acid labile
subunit [Bos taurus].
Length = 611
Score = 109 bits (273), Expect = 4e-24
Identities = 87/262 (33%), Positives = 127/262 (48%), Gaps = 1/262 (0%)
Frame = +1
Query: 298 NLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKV 477
+LT +P QG+ L+EL L+ N+L L + +L+ LDL+RN L+ + +F
Sbjct: 186 SLTVLPDTAFQGLAGLRELVLAGNKLAYLQPALFCGLGELRELDLSRNTLRSVKANVFVK 245
Query: 478 SAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNN 657
L L L N + + G+KALR LDLS N++ +L LH+L L +N
Sbjct: 246 LPKLQKLYLDHNLVAAVAPGAFLGMKALRWLDLSHNRVGSLLEDSFPGLLGLHVLRLSHN 305
Query: 658 QLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRG 837
L L P + LE L L NRL+ L E A +L L LN+N+L L G F G
Sbjct: 306 ALAGLRPRTFKDLHFLEELQLGHNRLRQLPEEAFAGLGQLEVLALNDNQLQELRPGGFLG 365
Query: 838 LQVLDMLDLSNNSLTSVPEGLWASLGKAAGNMKVGFEISGNPWICDQKLNDL-YRWLCGQ 1014
L+ L +L+LS+N L +PE + L K + G C +L L + L G
Sbjct: 366 LRNLAVLNLSSNCLRDLPERAFQGLAKLH-----SLHLEGG---CLARLGPLAFAGLSGL 417
Query: 1015 RKTRCFFQNNTSLCWPQKALGG 1080
R R F + N+ +++LGG
Sbjct: 418 R--RLFLKGNSIADVDERSLGG 437
Score = 107 bits (268), Expect = 2e-23
Identities = 83/237 (35%), Positives = 112/237 (47%), Gaps = 6/237 (2%)
Frame = +1
Query: 301 LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVS 480
L Q+P + G+ L+ L L++NQL++L L + L VL+L+ N L+ LP F+
Sbjct: 331 LRQLPEEAFAGLGQLEVLALNDNQLQELRPGGFLGLRNLAVLNLSSNCLRDLPERAFQGL 390
Query: 481 AALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQ 660
A LH+L L+ L L GL LR L L GN + + + L +L LDL NQ
Sbjct: 391 AKLHSLHLEGGCLARLGPLAFAGLSGLRRLFLKGNSIADVDERSLGGLAELLELDLTANQ 450
Query: 661 LQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGL 840
L LP L + +LE+L L NRL L L P + +L +++N+L L A A L
Sbjct: 451 LTHLPGRLFQDLGRLEYLLLARNRLSALPADALGPLQRTFWLDVSHNRLEALPAAALAPL 510
Query: 841 QVLDMLDLSNNSL-TSVP-----EGLWASLGKAAGNMKVGFEISGNPWICDQKLNDL 993
L L L NNSL T P E LW + GNPW C L L
Sbjct: 511 SRLRFLSLRNNSLRTFAPQPPGLERLW---------------LEGNPWDCSCALGAL 552
Score = 100 bits (250), Expect = 2e-21
Identities = 74/226 (32%), Positives = 115/226 (50%)
Frame = +1
Query: 211 NGSSISCQPPAKFPHYLPADTIYLATEFFNLTQMPADILQGIPNLQELHLSNNQLEDLSA 390
+G++ S P A F + + +L + L + L G+ L LHL +N+L L+A
Sbjct: 87 DGNNFSSIPAAAFRNL--SGLGFLNLQGSGLASLEPQALLGLRGLCHLHLEHNRLHALAA 144
Query: 391 KFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHL 570
L P L L L+ N L RL GLF+ A L L L N L +L + +GL LR L
Sbjct: 145 HTFLHTPGLASLGLSNNLLSRLDEGLFRGLAHLWDLNLGWNSLTVLPDTAFQGLAGLREL 204
Query: 571 DLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEE 750
L+GN+L L L +L LDL N L+++ ++ KL+ L+L+ N + +
Sbjct: 205 VLAGNKLAYLQPALFCGLGELRELDLSRNTLRSVKANVFVKLPKLQKLYLDHNLVAAVAP 264
Query: 751 GFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSV 888
G LR+L L++N++ +L +F GL L +L LS+N+L +
Sbjct: 265 GAFLGMKALRWLDLSHNRVGSLLEDSFPGLLGLHVLRLSHNALAGL 310
Score = 88.6 bits (218), Expect = 1e-17
Identities = 74/230 (32%), Positives = 101/230 (43%), Gaps = 24/230 (10%)
Frame = +1
Query: 301 LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVS 480
L + A++ +P LQ+L+L +N + ++ L + L+ LDL+ N + L F
Sbjct: 235 LRSVKANVFVKLPKLQKLYLDHNLVAAVAPGAFLGMKALRWLDLSHNRVGSLLEDSFPGL 294
Query: 481 AALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQ 660
LH L L N L L + L L L L N+LR LP + A L +L L +NQ
Sbjct: 295 LGLHVLRLSHNALAGLRPRTFKDLHFLEELQLGHNRLRQLPEEAFAGLGQLEVLALNDNQ 354
Query: 661 LQTLPP--------------------DL----LRGPLKLEWLHLEGNRLQVLEEGFLAPQ 768
LQ L P DL +G KL LHLEG L L A
Sbjct: 355 LQELRPGGFLGLRNLAVLNLSSNCLRDLPERAFQGLAKLHSLHLEGGCLARLGPLAFAGL 414
Query: 769 PKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASLGK 918
LR LFL N + + + GL L LDL+ N LT +P L+ LG+
Sbjct: 415 SGLRRLFLKGNSIADVDERSLGGLAELLELDLTANQLTHLPGRLFQDLGR 464
Score = 83.2 bits (204), Expect = 4e-16
Identities = 64/191 (33%), Positives = 88/191 (46%)
Frame = +1
Query: 319 DILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTL 498
D G+ L L LS+N L L + + L+ L L N L++LP F L L
Sbjct: 289 DSFPGLLGLHVLRLSHNALAGLRPRTFKDLHFLEELQLGHNRLRQLPEEAFAGLGQLEVL 348
Query: 499 VLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPP 678
L +N+L L GL+ L L+LS N LR LP + LH L L L L P
Sbjct: 349 ALNDNQLQELRPGGFLGLRNLAVLNLSSNCLRDLPERAFQGLAKLHSLHLEGGCLARLGP 408
Query: 679 DLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDML 858
G L L L+GN + ++E L +L L L N+LT L F+ L L+ L
Sbjct: 409 LAFAGLSGLRRLFLKGNSIADVDERSLGGLAELLELDLTANQLTHLPGRLFQDLGRLEYL 468
Query: 859 DLSNNSLTSVP 891
L+ N L+++P
Sbjct: 469 LLARNRLSALP 479
Score = 72.8 bits (177), Expect = 6e-13
Identities = 60/170 (35%), Positives = 75/170 (44%)
Frame = +1
Query: 409 PQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQ 588
P + L L N +P F+ + L L L+ + L L+ L GL+ L HL L N+
Sbjct: 79 PGTRALWLDGNNFSSIPAAAFRNLSGLGFLNLQGSGLASLEPQALLGLRGLCHLHLEHNR 138
Query: 589 LRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQ 768
L L + L L L NN L L L RG L L+L N L VL +
Sbjct: 139 LHALAAHTFLHTPGLASLGLSNNLLSRLDEGLFRGLAHLWDLNLGWNSLTVLPDTAFQGL 198
Query: 769 PKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASLGK 918
LR L L NKL L F GL L LDLS N+L SV ++ L K
Sbjct: 199 AGLRELVLAGNKLAYLQPALFCGLGELRELDLSRNTLRSVKANVFVKLPK 248
>ref|XP_002684904.1| PREDICTED: glycoprotein V (platelet) [Bos taurus].
Length = 583
Score = 108 bits (269), Expect = 1e-23
Identities = 77/236 (32%), Positives = 110/236 (46%), Gaps = 1/236 (0%)
Frame = +1
Query: 301 LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVS 480
L + + +L + L EL L N L + + L L L+ N L+ LP LF S
Sbjct: 206 LASLESGLLDSLRALTELQLHTNHLRSIVPGAFDRLRSLSSLTLSENRLEFLPSALFLHS 265
Query: 481 AALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLG-NN 657
L L L EN L+ L + LR L L QLRTLP N T L +L++ +
Sbjct: 266 HNLTFLTLSENPLEELPKVLFGEIGGLRELRLKSTQLRTLPAAAFRNLTGLRVLEVSLSP 325
Query: 658 QLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRG 837
+L LP D RG +L+ L L L L G L +LR++ L +N+L L + FR
Sbjct: 326 RLSALPEDAFRGLGELQVLALSSTGLASLPAGLLRGLCRLRHVSLRSNRLRALPSALFRN 385
Query: 838 LQVLDMLDLSNNSLTSVPEGLWASLGKAAGNMKVGFEISGNPWICDQKLNDLYRWL 1005
L L+ + L +N L ++P + +L + AG + + NPW CD L WL
Sbjct: 386 LSSLEEVQLDHNQLETLPGDAFEALPRLAGVL-----LGHNPWRCDCGLGPFLAWL 436
Score = 106 bits (264), Expect = 5e-23
Identities = 78/222 (35%), Positives = 111/222 (50%), Gaps = 5/222 (2%)
Frame = +1
Query: 268 DTIYLATEFF----NLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLT 435
D + L + F L + ++ Q + +LQEL L+ NQL L A + LK+LDL+
Sbjct: 119 DNLVLLEQLFLDGNELKSLDQNLFQKLVHLQELFLNQNQLAFLPASLFTHLGNLKLLDLS 178
Query: 436 RNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLL 615
N L LP GLF V L L+L NRL L++ L L+AL L L N LR++
Sbjct: 179 GNNLTHLPEGLFGVQVKLQKLLLHSNRLASLESGLLDSLRALTELQLHTNHLRSIVPGAF 238
Query: 616 ANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLN 795
L L L N+L+ LP L L +L L N L+ L + LR L L
Sbjct: 239 DRLRSLSSLTLSENRLEFLPSALFLHSHNLTFLTLSENPLEELPKVLFGEIGGLRELRLK 298
Query: 796 NNKLTTLAAGAFRGLQVLDMLDLS-NNSLTSVPEGLWASLGK 918
+ +L TL A AFR L L +L++S + L+++PE + LG+
Sbjct: 299 STQLRTLPAAAFRNLTGLRVLEVSLSPRLSALPEDAFRGLGE 340
Score = 94.7 bits (234), Expect = 1e-19
Identities = 68/187 (36%), Positives = 91/187 (48%)
Frame = +1
Query: 343 LQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLD 522
LQ L LS++ + ++ +LK L L+RN + LP L L L L N L
Sbjct: 76 LQRLLLSDSHVSAIAPGTFNDPIKLKTLRLSRNKITHLPSALLDNLVLLEQLFLDGNELK 135
Query: 523 ILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLK 702
LD + + L L+ L L+ NQL LP L + +L +LDL N L LP L +K
Sbjct: 136 SLDQNLFQKLVHLQELFLNQNQLAFLPASLFTHLGNLKLLDLSGNNLTHLPEGLFGVQVK 195
Query: 703 LEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLT 882
L+ L L NRL LE G L L L L+ N L ++ GAF L+ L L LS N L
Sbjct: 196 LQKLLLHSNRLASLESGLLDSLRALTELQLHTNHLRSIVPGAFDRLRSLSSLTLSENRLE 255
Query: 883 SVPEGLW 903
+P L+
Sbjct: 256 FLPSALF 262
Score = 86.7 bits (213), Expect = 4e-17
Identities = 62/185 (33%), Positives = 87/185 (47%)
Frame = +1
Query: 358 LSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDAS 537
L NN D++ L+ L L+ + + + PG F L TL L N++ L ++
Sbjct: 65 LQNNSFSDMTV--------LQRLLLSDSHVSAIAPGTFNDPIKLKTLRLSRNKITHLPSA 116
Query: 538 WLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLH 717
L L L L L GN+L++L + L L L L NQL LP L L+ L
Sbjct: 117 LLDNLVLLEQLFLDGNELKSLDQNLFQKLVHLQELFLNQNQLAFLPASLFTHLGNLKLLD 176
Query: 718 LEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEG 897
L GN L L EG Q KL+ L L++N+L +L +G L+ L L L N L S+ G
Sbjct: 177 LSGNNLTHLPEGLFGVQVKLQKLLLHSNRLASLESGLLDSLRALTELQLHTNHLRSIVPG 236
Query: 898 LWASL 912
+ L
Sbjct: 237 AFDRL 241
Score = 80.5 bits (197), Expect = 3e-15
Identities = 66/191 (34%), Positives = 88/191 (46%)
Frame = +1
Query: 343 LQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLD 522
L+ L LS N++ L + L + L+ L L N LK L LF+ L L L +N+L
Sbjct: 100 LKTLRLSRNKITHLPSALLDNLVLLEQLFLDGNELKSLDQNLFQKLVHLQELFLNQNQLA 159
Query: 523 ILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLK 702
L AS L L+ LDLSGN L LP L L L L +N+L +L LL
Sbjct: 160 FLPASLFTHLGNLKLLDLSGNNLTHLPEGLFGVQVKLQKLLLHSNRLASLESGLLDSLRA 219
Query: 703 LEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLT 882
L L L N L+ + G L L L+ N+L L + F L L LS N L
Sbjct: 220 LTELQLHTNHLRSIVPGAFDRLRSLSSLTLSENRLEFLPSALFLHSHNLTFLTLSENPLE 279
Query: 883 SVPEGLWASLG 915
+P+ L+ +G
Sbjct: 280 ELPKVLFGEIG 290
Score = 53.5 bits (127), Expect = 4e-07
Identities = 41/134 (30%), Positives = 63/134 (47%)
Frame = +1
Query: 559 LRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQ 738
L H+ L TL ++ T L L L ++ + + P P+KL+ L L N++
Sbjct: 52 LTHILLFQMGRGTLQNNSFSDMTVLQRLLLSDSHVSAIAPGTFNDPIKLKTLRLSRNKIT 111
Query: 739 VLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASLGK 918
L L L LFL+ N+L +L F+ L L L L+ N L +P L+ L
Sbjct: 112 HLPSALLDNLVLLEQLFLDGNELKSLDQNLFQKLVHLQELFLNQNQLAFLPASLFTHL-- 169
Query: 919 AAGNMKVGFEISGN 960
GN+K+ ++SGN
Sbjct: 170 --GNLKL-LDLSGN 180
>ref|XP_002691418.1| PREDICTED: leucine rich repeat transmembrane neuronal 2-like [Bos
taurus].
Length = 535
Score = 100 bits (249), Expect = 3e-21
Identities = 83/298 (27%), Positives = 130/298 (43%), Gaps = 27/298 (9%)
Frame = +1
Query: 274 IYLATEFFNLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKR 453
I+L + ++ + D QGI L+EL LS+N++ L K PVP L+ LDL+ N L+
Sbjct: 88 IWLYLDHNYISSVDEDAFQGIRRLKELILSSNKITYLHNKTFHPVPNLRSLDLSYNKLQS 147
Query: 454 LPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDL 633
L FK GL+ L L L N L+T+P ++ + +L
Sbjct: 148 LQSEQFK------------------------GLRKLIILHLRSNSLKTVPIRVFQDCRNL 183
Query: 634 HILDLGNNQLQTLPPDLLRGPLKLEWLHLE------------------------GNRLQV 741
LDLG N+L++L + G LKL+ LHLE NR++
Sbjct: 184 DFLDLGYNRLRSLSRNAFAGLLKLKELHLEHNQFSKINFAHFPRLFNLRSIYLQWNRIRS 243
Query: 742 LEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPE---GLWASL 912
+ +G L L L+ N + + G F+ L L L+L +N LT++ + W SL
Sbjct: 244 ISQGLTWTWSSLHNLDLSGNDIQGIEPGTFKCLPNLQKLNLDSNKLTNISQETVNAWISL 303
Query: 913 GKAAGNMKVGFEISGNPWICDQKLNDLYRWLCGQRKTRCFFQNNTSLCWPQKALGGAK 1086
+ +SGN W C + + L+ WL + + +T +C K + G K
Sbjct: 304 --------ISITLSGNMWECSRSICPLFYWLKNFKGNK----ESTMICAGPKHMQGEK 349
>ref|XP_876920.3| PREDICTED: leucine rich repeat transmembrane neuronal 2-like isoform
3 [Bos taurus].
Length = 535
Score = 100 bits (249), Expect = 3e-21
Identities = 83/298 (27%), Positives = 130/298 (43%), Gaps = 27/298 (9%)
Frame = +1
Query: 274 IYLATEFFNLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKR 453
I+L + ++ + D QGI L+EL LS+N++ L K PVP L+ LDL+ N L+
Sbjct: 88 IWLYLDHNYISSVDEDAFQGIRRLKELILSSNKITYLHNKTFHPVPNLRSLDLSYNKLQS 147
Query: 454 LPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDL 633
L FK GL+ L L L N L+T+P ++ + +L
Sbjct: 148 LQSEQFK------------------------GLRKLIILHLRSNSLKTVPIRVFQDCRNL 183
Query: 634 HILDLGNNQLQTLPPDLLRGPLKLEWLHLE------------------------GNRLQV 741
LDLG N+L++L + G LKL+ LHLE NR++
Sbjct: 184 DFLDLGYNRLRSLSRNAFAGLLKLKELHLEHNQFSKINFAHFPRLFNLRSIYLQWNRIRS 243
Query: 742 LEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPE---GLWASL 912
+ +G L L L+ N + + G F+ L L L+L +N LT++ + W SL
Sbjct: 244 ISQGLTWTWSSLHNLDLSGNDIQGIEPGTFKCLPNLQKLNLDSNKLTNISQETVNAWISL 303
Query: 913 GKAAGNMKVGFEISGNPWICDQKLNDLYRWLCGQRKTRCFFQNNTSLCWPQKALGGAK 1086
+ +SGN W C + + L+ WL + + +T +C K + G K
Sbjct: 304 --------ISITLSGNMWECSRSICPLFYWLKNFKGNK----ESTMICAGPKHMQGEK 349
>ref|NP_001096753.1| leucine-rich repeat transmembrane neuronal protein 3 [Bos taurus].
Length = 536
Score = 99.8 bits (247), Expect = 4e-21
Identities = 81/319 (25%), Positives = 142/319 (44%), Gaps = 30/319 (9%)
Frame = +1
Query: 214 GSSISC--QPPAKFPHYLPADTIYLATEFFNLTQMPADILQGIPNLQELHLSNNQLEDLS 387
G + C Q + P + A + L+ + +L ++ + +G+ L L+L +N + ++
Sbjct: 42 GKMVYCESQKLQEIPSSISAGCLGLSLRYNSLQKLKYNQFKGLNQLTWLYLDHNHISNID 101
Query: 388 AKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRH 567
+ +LK L L+ N + F+ L L L N+L L + RGL+ L
Sbjct: 102 ENAFNGIRRLKELILSSNRISYFLNNTFRPVTNLRNLDLSYNQLHSLGSEQFRGLRKLLS 161
Query: 568 LDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLE 747
L L N LRT+P ++ + +L +LDLG N++++L ++ G ++L+ LHLE N+ L
Sbjct: 162 LHLRSNSLRTIPVRIFQDCRNLELLDLGYNRIRSLARNVFAGMIRLKELHLEHNQFSKLN 221
Query: 748 EGFLAPQPKLRYLFLNNNKLTTLA---AGAFRGLQVLDM--------------------- 855
L+ L+L NK++ + + + LQ LD+
Sbjct: 222 LALFPRLVSLQNLYLQWNKISVIGQTMSWTWSSLQRLDLSGNEIEAFSGPSVFQCVPNLQ 281
Query: 856 -LDLSNNSLTSVPEGL---WASLGKAAGNMKVGFEISGNPWICDQKLNDLYRWLCGQRKT 1023
L+L +N LT + + + W SL ++GN W C + + L WL K+
Sbjct: 282 RLNLDSNKLTFIGQEILDSWISLN--------DISLAGNIWECSRNICSLVNWL----KS 329
Query: 1024 RCFFQNNTSLCWPQKALGG 1080
+ NT +C K L G
Sbjct: 330 FKGLRENTIICASPKELQG 348
>ref|XP_002696352.1| PREDICTED: leucine rich repeat containing 70 isoform 1 [Bos taurus].
Length = 622
Score = 99.0 bits (245), Expect = 8e-21
Identities = 81/311 (26%), Positives = 134/311 (43%), Gaps = 21/311 (6%)
Frame = +1
Query: 184 NACLVFHSSNGSSISCQPPAKFPHYLPADTIYLATEFFNLTQMPADILQGIPNLQELHLS 363
++ + H N S + P A F H +YL F + ++ I +G+ NL+ L+L
Sbjct: 84 HSLVALHLDNSSIVYIYPKA-FVHLRHLYFLYLNNNF--IKRLDPGIFEGLSNLRNLYLQ 140
Query: 364 NNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWL 543
+NQL + + ++ L+L RN L L G F AL L L N++ + S
Sbjct: 141 SNQLSFVPRGVFHDLVSVQYLNLQRNRLTVLGSGTFVGMIALRILDLSNNKILRISDSGF 200
Query: 544 RGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLE 723
+ L L L L GN L +P L L L +N ++T+ P +G + LE+L L+
Sbjct: 201 QHLGNLDCLYLEGNNLTKVPSNTFEVLKSLKRLSLSHNHIETIQPFAFKGLINLEYLLLK 260
Query: 724 GNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLW 903
+R++ + + L++L L++N L L + F L+ L L L N + S+ +
Sbjct: 261 NSRIKNVTRDGFSGISNLKHLILSHNDLENLNSDTFSLLKNLIYLRLDRNRIISIDNNTF 320
Query: 904 ASLGKAAGNMKVGF--------------------EISGNPWICDQKLNDLYRWLCGQRKT 1023
++G + + + F + NPW C +L L WL T
Sbjct: 321 ENMGASLKILNLSFNNLTDLHPRVLKPLSSLIHLQADSNPWDCSCRLLGLRDWLASSAIT 380
Query: 1024 -RCFFQNNTSL 1053
F QN S+
Sbjct: 381 LNIFCQNPPSM 391
Score = 93.6 bits (231), Expect = 3e-19
Identities = 64/227 (28%), Positives = 110/227 (48%), Gaps = 2/227 (0%)
Frame = +1
Query: 214 GSSISCQPP--AKFPHYLPADTIYLATEFFNLTQMPADILQGIPNLQELHLSNNQLEDLS 387
G I+C+ + P P T++L N++++ G+ +L LHL N+ + +
Sbjct: 41 GRQITCRNLGLSNIPKNFPESTVFLYLTGNNISRINESEFTGLHSLVALHLDNSSIVYIY 100
Query: 388 AKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRH 567
K + + L L L N +KRL PG+F+ + L L L+ N+L + L ++++
Sbjct: 101 PKAFVHLRHLYFLYLNNNFIKRLDPGIFEGLSNLRNLYLQSNQLSFVPRGVFHDLVSVQY 160
Query: 568 LDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLE 747
L+L N+L L L ILDL NN++ + + L+ L+LEGN L +
Sbjct: 161 LNLQRNRLTVLGSGTFVGMIALRILDLSNNKILRISDSGFQHLGNLDCLYLEGNNLTKVP 220
Query: 748 EGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSV 888
L+ L L++N + T+ AF+GL L+ L L N+ + +V
Sbjct: 221 SNTFEVLKSLKRLSLSHNHIETIQPFAFKGLINLEYLLLKNSRIKNV 267
Score = 70.5 bits (171), Expect = 3e-12
Identities = 43/140 (30%), Positives = 69/140 (49%)
Frame = +1
Query: 496 LVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLP 675
L L N + ++ S GL +L L L + + + K + L+ L L NN ++ L
Sbjct: 65 LYLTGNNISRINESEFTGLHSLVALHLDNSSIVYIYPKAFVHLRHLYFLYLNNNFIKRLD 124
Query: 676 PDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDM 855
P + G L L+L+ N+L + G ++YL L N+LT L +G F G+ L +
Sbjct: 125 PGIFEGLSNLRNLYLQSNQLSFVPRGVFHDLVSVQYLNLQRNRLTVLGSGTFVGMIALRI 184
Query: 856 LDLSNNSLTSVPEGLWASLG 915
LDLSNN + + + + LG
Sbjct: 185 LDLSNNKILRISDSGFQHLG 204
>ref|XP_002702544.1| PREDICTED: leucine rich repeat containing 70 isoform 1 [Bos taurus].
Length = 622
Score = 99.0 bits (245), Expect = 8e-21
Identities = 81/311 (26%), Positives = 134/311 (43%), Gaps = 21/311 (6%)
Frame = +1
Query: 184 NACLVFHSSNGSSISCQPPAKFPHYLPADTIYLATEFFNLTQMPADILQGIPNLQELHLS 363
++ + H N S + P A F H +YL F + ++ I +G+ NL+ L+L
Sbjct: 84 HSLVALHLDNSSIVYIYPKA-FVHLRHLYFLYLNNNF--IKRLDPGIFEGLSNLRNLYLQ 140
Query: 364 NNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWL 543
+NQL + + ++ L+L RN L L G F AL L L N++ + S
Sbjct: 141 SNQLSFVPRGVFHDLVSVQYLNLQRNRLTVLGSGTFVGMIALRILDLSNNKILRISDSGF 200
Query: 544 RGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLE 723
+ L L L L GN L +P L L L +N ++T+ P +G + LE+L L+
Sbjct: 201 QHLGNLDCLYLEGNNLTKVPSNTFEVLKSLKRLSLSHNHIETIQPFAFKGLINLEYLLLK 260
Query: 724 GNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLW 903
+R++ + + L++L L++N L L + F L+ L L L N + S+ +
Sbjct: 261 NSRIKNVTRDGFSGISNLKHLILSHNDLENLNSDTFSLLKNLIYLRLDRNRIISIDNNTF 320
Query: 904 ASLGKAAGNMKVGF--------------------EISGNPWICDQKLNDLYRWLCGQRKT 1023
++G + + + F + NPW C +L L WL T
Sbjct: 321 ENMGASLKILNLSFNNLTDLHPRVLKPLSSLIHLQADSNPWDCSCRLLGLRDWLASSAIT 380
Query: 1024 -RCFFQNNTSL 1053
F QN S+
Sbjct: 381 LNIFCQNPPSM 391
Score = 93.6 bits (231), Expect = 3e-19
Identities = 64/227 (28%), Positives = 110/227 (48%), Gaps = 2/227 (0%)
Frame = +1
Query: 214 GSSISCQPP--AKFPHYLPADTIYLATEFFNLTQMPADILQGIPNLQELHLSNNQLEDLS 387
G I+C+ + P P T++L N++++ G+ +L LHL N+ + +
Sbjct: 41 GRQITCRNLGLSNIPKNFPESTVFLYLTGNNISRINESEFTGLHSLVALHLDNSSIVYIY 100
Query: 388 AKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRH 567
K + + L L L N +KRL PG+F+ + L L L+ N+L + L ++++
Sbjct: 101 PKAFVHLRHLYFLYLNNNFIKRLDPGIFEGLSNLRNLYLQSNQLSFVPRGVFHDLVSVQY 160
Query: 568 LDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLE 747
L+L N+L L L ILDL NN++ + + L+ L+LEGN L +
Sbjct: 161 LNLQRNRLTVLGSGTFVGMIALRILDLSNNKILRISDSGFQHLGNLDCLYLEGNNLTKVP 220
Query: 748 EGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSV 888
L+ L L++N + T+ AF+GL L+ L L N+ + +V
Sbjct: 221 SNTFEVLKSLKRLSLSHNHIETIQPFAFKGLINLEYLLLKNSRIKNV 267
Score = 70.5 bits (171), Expect = 3e-12
Identities = 43/140 (30%), Positives = 69/140 (49%)
Frame = +1
Query: 496 LVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLP 675
L L N + ++ S GL +L L L + + + K + L+ L L NN ++ L
Sbjct: 65 LYLTGNNISRINESEFTGLHSLVALHLDNSSIVYIYPKAFVHLRHLYFLYLNNNFIKRLD 124
Query: 676 PDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDM 855
P + G L L+L+ N+L + G ++YL L N+LT L +G F G+ L +
Sbjct: 125 PGIFEGLSNLRNLYLQSNQLSFVPRGVFHDLVSVQYLNLQRNRLTVLGSGTFVGMIALRI 184
Query: 856 LDLSNNSLTSVPEGLWASLG 915
LDLSNN + + + + LG
Sbjct: 185 LDLSNNKILRISDSGFQHLG 204
>ref|XP_002688798.1| PREDICTED: Podnl1 protein-like [Bos taurus].
Length = 653
Score = 98.2 bits (243), Expect = 1e-20
Identities = 85/237 (35%), Positives = 117/237 (49%), Gaps = 6/237 (2%)
Frame = +1
Query: 220 SISCQPPAKFPHYLPADTIYLATEFFNLTQMPADILQGIPNLQELHLSNNQLED--LSAK 393
S+S + P LP L + ++++P L +L+EL+L +NQL D L A
Sbjct: 233 SLSSNQLSYVPPSLPPSLERLHLQNNLISKVPRGALSRQTHLRELYLQHNQLTDSGLDAT 292
Query: 394 FLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLD 573
+ +L+ LDL+ N L +P GL + A LH L NR+ ++A+ L GL+ LR+L
Sbjct: 293 TFSKLHRLEYLDLSHNQLAAVPAGLPRTLAVLH---LGRNRIRWVEAARLGGLRGLRYLL 349
Query: 574 LSGNQLRT--LPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLE 747
L NQL LP L LH L L N+L +P L P +L L L NR+ L
Sbjct: 350 LQHNQLGATGLPAGALRPLRGLHTLHLYGNRLDRVPQAL---PRRLRALVLPHNRVAALG 406
Query: 748 EGFLAPQPKLRYLFLNNNKLTTLAAG--AFRGLQVLDMLDLSNNSLTSVPEGLWASL 912
L P+L L L N L + AFR L+ L LDL+ N LT +P GL A L
Sbjct: 407 ARDLTSTPRLAELNLAYNCLASARVHLRAFRRLRALRSLDLAGNQLTQLPSGLPAGL 463
Score = 97.1 bits (240), Expect = 3e-20
Identities = 81/217 (37%), Positives = 112/217 (51%), Gaps = 7/217 (3%)
Frame = +1
Query: 244 KFPHYLPADTIYLATEFFNLTQMPADILQGIPNLQELHLSNNQLED--LSAKFLLPVPQL 417
+ P LP L + + A L P L EL+L+ N L + + + L
Sbjct: 383 RVPQALPRRLRALVLPHNRVAALGARDLTSTPRLAELNLAYNCLASARVHLRAFRRLRAL 442
Query: 418 KVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRT 597
+ LDL N L +LP GL A LHTL L+ N+L L+ L GL L+ L L+ N+LR
Sbjct: 443 RSLDLAGNQLTQLPSGL---PAGLHTLRLQRNQLRTLEPEPLAGLHQLQELSLAHNRLRV 499
Query: 598 --LPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRL-QVLEEGFLAPQ 768
+ L +LDL +N+L +PPDL P LE LHL+GNR+ V E FL+
Sbjct: 500 GGIGPGTWHELQALQVLDLSHNELSFVPPDL---PEALEELHLQGNRIGHVGPEAFLS-T 555
Query: 769 PKLRYLFLNNNKL--TTLAAGAFRGLQVLDMLDLSNN 873
P+LR LFL N+L T++A AF GL L ++D + N
Sbjct: 556 PRLRALFLRANRLHMTSIAPEAFLGLLHLRVVDTTGN 592
Score = 78.2 bits (191), Expect = 1e-14
Identities = 85/248 (34%), Positives = 106/248 (42%), Gaps = 28/248 (11%)
Frame = +1
Query: 241 AKFPHYLPADTIYLATEFFNLTQMPADILQGIPNLQELHLSNNQL--EDLSAKFLLPVPQ 414
A P LP L + + A L G+ L+ L L +NQL L A L P+
Sbjct: 311 AAVPAGLPRTLAVLHLGRNRIRWVEAARLGGLRGLRYLLLQHNQLGATGLPAGALRPLRG 370
Query: 415 LKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWL----------------- 543
L L L N L R+P L + L LVL NR+ L A L
Sbjct: 371 LHTLHLYGNRLDRVPQALPR---RLRALVLPHNRVAALGARDLTSTPRLAELNLAYNCLA 427
Query: 544 ---------RGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGP 696
R L+ALR LDL+GNQL LP L A LH L L NQL+TL P+ L G
Sbjct: 428 SARVHLRAFRRLRALRSLDLAGNQLTQLPSGLPAG---LHTLRLQRNQLRTLEPEPLAGL 484
Query: 697 LKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNS 876
+L+ L L NRL+V G + P G + LQ L +LDLS+N
Sbjct: 485 HQLQELSLAHNRLRV---GGIGP-------------------GTWHELQALQVLDLSHNE 522
Query: 877 LTSVPEGL 900
L+ VP L
Sbjct: 523 LSFVPPDL 530
Score = 77.4 bits (189), Expect = 2e-14
Identities = 66/214 (30%), Positives = 101/214 (47%), Gaps = 4/214 (1%)
Frame = +1
Query: 271 TIYLATEFFNLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALK 450
T+ L + +P + + + LQ +++++N+L ++ +FL L+V DL N +
Sbjct: 134 TLNLHNNLISSEGLPDEAFESLTQLQHIYVAHNKLS-VAPQFL--PRSLRVADLAANEVT 190
Query: 451 RLPPGLFKVSAALHTLVLKENRLDI--LDASWLRGLKALRHLDLSGNQLRTLPRKLLANF 624
+ P F AL ++ L N+L L RG +A+ L LS NQL +P
Sbjct: 191 EIFPLTFGEKPALRSVYLHNNQLSNAGLPPDAFRGSEAVATLSLSSNQLSYVP------- 243
Query: 625 TDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNK 804
+LPP LE LHL+ N + + G L+ Q LR L+L +N+
Sbjct: 244 -------------PSLPP-------SLERLHLQNNLISKVPRGALSRQTHLRELYLQHNQ 283
Query: 805 LTT--LAAGAFRGLQVLDMLDLSNNSLTSVPEGL 900
LT L A F L L+ LDLS+N L +VP GL
Sbjct: 284 LTDSGLDATTFSKLHRLEYLDLSHNQLAAVPAGL 317
Score = 58.2 bits (139), Expect = 1e-08
Identities = 43/145 (29%), Positives = 69/145 (47%), Gaps = 25/145 (17%)
Frame = +1
Query: 553 KALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQT--LPPDLLRGPLKLEWLHLEG 726
+A +HL L NQL+ LP L+ + L L+L NN + + LP + +L+ +++
Sbjct: 106 RAAQHLSLQNNQLQELPYNELSRLSGLRTLNLHNNLISSEGLPDEAFESLTQLQHIYVAH 165
Query: 727 NRLQVLEEGF---------------------LAPQPKLRYLFLNNNKLTT--LAAGAFRG 837
N+L V + +P LR ++L+NN+L+ L AFRG
Sbjct: 166 NKLSVAPQFLPRSLRVADLAANEVTEIFPLTFGEKPALRSVYLHNNQLSNAGLPPDAFRG 225
Query: 838 LQVLDMLDLSNNSLTSVPEGLWASL 912
+ + L LS+N L+ VP L SL
Sbjct: 226 SEAVATLSLSSNQLSYVPPSLPPSL 250
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 49,061,066
Number of extensions: 1509574
Number of successful extensions: 9775
Number of sequences better than 1.0e-05: 224
Number of HSP's gapped: 8272
Number of HSP's successfully gapped: 723
Length of query: 402
Length of database: 17,681,374
Length adjustment: 104
Effective length of query: 298
Effective length of database: 14,240,222
Effective search space: 4243586156
Effective search space used: 4243586156
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-001980
(1207 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_854692.1| PREDICTED: similar to leucine-rich alpha-2-glyc... 459 e-129
Alignment gi|XP_545165.2| PREDICTED: similar to Carboxypeptidase N subuni... 118 1e-26
Alignment gi|XP_545164.2| PREDICTED: similar to leucine rich repeat conta... 114 1e-25
Alignment gi|XP_538355.2| PREDICTED: similar to Ran GTPase-activating pro... 112 7e-25
Alignment gi|XP_547189.2| PREDICTED: similar to insulin-like growth facto... 104 1e-22
Alignment gi|XP_542026.2| PREDICTED: similar to Fibromodulin precursor (F... 102 6e-22
Alignment gi|XP_855323.1| PREDICTED: similar to Extracellular matrix prot... 100 4e-21
Alignment gi|XP_852514.1| PREDICTED: similar to Leucine-rich repeat trans... 100 4e-21
Alignment gi|XP_540206.2| PREDICTED: similar to Leucine-rich repeat trans... 100 4e-21
Alignment gi|XP_546127.2| PREDICTED: similar to Leucine-rich repeat trans... 100 5e-21
>ref|XP_854692.1| PREDICTED: similar to leucine-rich alpha-2-glycoprotein 1 [Canis
familiaris].
Length = 347
Score = 459 bits (1182), Expect = e-129
Identities = 233/338 (68%), Positives = 264/338 (78%)
Frame = +1
Query: 64 MSSWSPEGKQSPGSWEPHLCRIXXXXXXXXXSAKGVTPDPNACLVFHSSNGSSISCQPPA 243
MS WSPE QSPG HL + SA+GVTPD + CLVF SSNGSS+SC PPA
Sbjct: 1 MSPWSPERSQSPGGLSSHLSKTLLLLLFSVASAQGVTPDRDTCLVFPSSNGSSVSCHPPA 60
Query: 244 KFPHYLPADTIYLATEFFNLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKV 423
K PH+ P+DT++L EFFNLTQ+ D LQG+ NLQELHLS NQLE LS K LLPVP LKV
Sbjct: 61 KLPHHFPSDTVHLVVEFFNLTQLRPDTLQGVSNLQELHLSTNQLESLSPKLLLPVPLLKV 120
Query: 424 LDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLP 603
LDLTRNAL +LPPGLF+VSAALHTLVLKENRL++L+ SWL GLKAL HLDLSGN L+TLP
Sbjct: 121 LDLTRNALTQLPPGLFRVSAALHTLVLKENRLEVLEPSWLCGLKALGHLDLSGNHLQTLP 180
Query: 604 RKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRY 783
LLAN T L ILDL NNQL+TLP DLLRGPL+LE LHLEGNRLQVLEEG LAPQP LRY
Sbjct: 181 PGLLANVTALRILDLSNNQLKTLPLDLLRGPLQLERLHLEGNRLQVLEEGLLAPQPGLRY 240
Query: 784 LFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASLGKAAGNMKVGFEISGNP 963
LFL++NKL +AAGAFRGLQ LDMLDLSNNSLTSVP+GLW SLG+ +M+ GF+ISGNP
Sbjct: 241 LFLSDNKLAAVAAGAFRGLQQLDMLDLSNNSLTSVPKGLWTSLGQPTRDMEDGFDISGNP 300
Query: 964 WICDQKLNDLYRWLCGQRKTRCFFQNNTSLCWPQKALG 1077
WICD L+DLYRWL K + F +N+T P+ G
Sbjct: 301 WICDHNLDDLYRWLVA-NKDKMFSRNDTRCARPEALKG 337
>ref|XP_545165.2| PREDICTED: similar to Carboxypeptidase N subunit 2 precursor
(Carboxypeptidase N polypeptide 2) (Carboxypeptidase N 83
kDa chain) (Carboxypeptidase N regulatory subunit)
(Carboxypeptidase N large subunit) [Canis familiaris].
Length = 547
Score = 118 bits (295), Expect = 1e-26
Identities = 87/281 (30%), Positives = 126/281 (44%), Gaps = 44/281 (15%)
Frame = +1
Query: 295 FNLTQ-MPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLF 471
FNL + +P + + L+ L L N+L+ L + P+ +L+ L+L +N L LP GLF
Sbjct: 130 FNLLEALPEGLFGHMEALESLQLQGNRLQSLPRRLFQPLTRLQSLNLAQNLLAHLPEGLF 189
Query: 472 KVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLG 651
+L TL L +N L L GL +LR L L GN + LP + + L L L
Sbjct: 190 DPLGSLQTLRLSDNALSGLPPGVFGGLHSLRELFLDGNSISELPPGVFSRLFRLEQLWLQ 249
Query: 652 NNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAF 831
N + LP + L +L L+GN L+VL G AP P L L L+ NKL ++ GAF
Sbjct: 250 RNAIGHLPLSVFSSLGNLTFLSLQGNALRVLPAGLFAPTPGLLVLSLSYNKLEAVSEGAF 309
Query: 832 RGLQVLDMLDLSNNSLTSVPEG--------------------LWASLGKAAGNMKV---- 939
L L L LS+N++T +P G L +L + N+++
Sbjct: 310 ANLSSLSSLTLSHNAITHLPAGVFRGLEGLVKLYLGSNNLTALHPTLFQNLSNLELLSLS 369
Query: 940 -------------------GFEISGNPWICDQKLNDLYRWL 1005
+ GNPW CD L L++WL
Sbjct: 370 RNLLTTLPTGIFDSNYNLFNLALHGNPWQCDCHLAYLFQWL 410
Score = 95.1 bits (235), Expect = 1e-19
Identities = 75/255 (29%), Positives = 115/255 (45%), Gaps = 3/255 (1%)
Frame = +1
Query: 160 AKGVTPDPNACLVFHSS---NGSSISCQPPAKFPHYLPADTIYLATEFFNLTQMPADILQ 330
A+ P P C F + + ++ PP P L D +++ T +L+ + +
Sbjct: 16 ARCARPCPAGCDCFAQELFCSDAGLAAVPPDIPP--LATDIVFVET---SLSALGSRAFS 70
Query: 331 GIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKE 510
G PNL ++ N L+ L +P+L+ L++T A L F +L
Sbjct: 71 GSPNLTKVVFLNAPLQHLGPDAFGGLPRLQDLEVTGGAFTNLSSAAFSNLTSLGKFTFNF 130
Query: 511 NRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLR 690
N L+ L ++AL L L GN+L++LPR+L T L L+L N L LP L
Sbjct: 131 NLLEALPEGLFGHMEALESLQLQGNRLQSLPRRLFQPLTRLQSLNLAQNLLAHLPEGLFD 190
Query: 691 GPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSN 870
L+ L L N L L G LR LFL+ N ++ L G F L L+ L L
Sbjct: 191 PLGSLQTLRLSDNALSGLPPGVFGGLHSLRELFLDGNSISELPPGVFSRLFRLEQLWLQR 250
Query: 871 NSLTSVPEGLWASLG 915
N++ +P +++SLG
Sbjct: 251 NAIGHLPLSVFSSLG 265
>ref|XP_545164.2| PREDICTED: similar to leucine rich repeat containing 15 [Canis
familiaris].
Length = 614
Score = 114 bits (286), Expect = 1e-25
Identities = 75/235 (31%), Positives = 108/235 (45%)
Frame = +1
Query: 301 LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVS 480
L+++P G NLQEL L NQ+ LS L+ L L+ N + +LPPG+F
Sbjct: 240 LSEIPMGTFDGCGNLQELALQQNQIGMLSPGLFHNNRNLQKLYLSNNHISQLPPGIFMQL 299
Query: 481 AALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQ 660
L+ L L N L L + LR L L N + +LP + +N L +L L NQ
Sbjct: 300 PQLNRLTLFGNSLKELSPGIFGPMHNLRELWLYDNHITSLPDNVFSNLHQLQVLILSRNQ 359
Query: 661 LQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGL 840
+ + PD G ++L L L N LQ L+ L+ + L NN+L L F +
Sbjct: 360 INYISPDAFNGLVELRELSLHTNALQELDGSVFRMLVNLQNISLQNNRLRQLPGNIFANV 419
Query: 841 QVLDMLDLSNNSLTSVPEGLWASLGKAAGNMKVGFEISGNPWICDQKLNDLYRWL 1005
L + L NN L ++P G++ LG + NPW CD + L+ WL
Sbjct: 420 NGLMTIQLQNNQLENLPMGIFDHLGNLC-----ELRLYDNPWRCDSDILPLHNWL 469
Score = 90.5 bits (223), Expect = 3e-18
Identities = 67/212 (31%), Positives = 98/212 (46%)
Frame = +1
Query: 277 YLATEFFNLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRL 456
YL+ L +P + QG+ NL+ L LS+NQL + LK L L N L+ +
Sbjct: 136 YLSLANNKLQVLPIGLFQGLNNLESLLLSSNQLVQIQPAHFSQFSNLKELQLHGNHLEYI 195
Query: 457 PPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLH 636
P G+F L L L +N L L + L L+ L L N+L +P +L
Sbjct: 196 PDGVFDHLVGLTKLNLGKNSLTHLSPRIFQRLGNLQVLRLYENRLSEIPMGTFDGCGNLQ 255
Query: 637 ILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTL 816
L L NQ+ L P L L+ L+L N + L G P+L L L N L L
Sbjct: 256 ELALQQNQIGMLSPGLFHNNRNLQKLYLSNNHISQLPPGIFMQLPQLNRLTLFGNSLKEL 315
Query: 817 AAGAFRGLQVLDMLDLSNNSLTSVPEGLWASL 912
+ G F + L L L +N +TS+P+ ++++L
Sbjct: 316 SPGIFGPMHNLRELWLYDNHITSLPDNVFSNL 347
Score = 84.0 bits (206), Expect = 3e-16
Identities = 66/237 (27%), Positives = 104/237 (43%), Gaps = 2/237 (0%)
Frame = +1
Query: 208 SNGSSISCQPP--AKFPHYLPADTIYLATEFFNLTQMPADILQGIPNLQELHLSNNQLED 381
S S + C P LP + + L ++T++ I L L + N+L
Sbjct: 63 SRASQVECTGARIVAVPAPLPWNAMSLQILNTHITELNESPFLNISALIALRIEKNELSH 122
Query: 382 LSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKAL 561
+ + L+ L L N L+ LP GLF+ L +L+L N+L + + L
Sbjct: 123 IMPGAFRNLGSLRYLSLANNKLQVLPIGLFQGLNNLESLLLSSNQLVQIQPAHFSQFSNL 182
Query: 562 RHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQV 741
+ L L GN L +P + + L L+LG N L L P + + L+ L L NRL
Sbjct: 183 KELQLHGNHLEYIPDGVFDHLVGLTKLNLGKNSLTHLSPRIFQRLGNLQVLRLYENRLSE 242
Query: 742 LEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASL 912
+ G L+ L L N++ L+ G F + L L LSNN ++ +P G++ L
Sbjct: 243 IPMGTFDGCGNLQELALQQNQIGMLSPGLFHNNRNLQKLYLSNNHISQLPPGIFMQL 299
Score = 77.8 bits (190), Expect = 2e-14
Identities = 59/213 (27%), Positives = 98/213 (46%)
Frame = +1
Query: 274 IYLATEFFNLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKR 453
I L E L+ + + + +L+ L L+NN+L+ L + L+ L L+ N L +
Sbjct: 111 IALRIEKNELSHIMPGAFRNLGSLRYLSLANNKLQVLPIGLFQGLNNLESLLLSSNQLVQ 170
Query: 454 LPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDL 633
+ P F + L L L N L+ + L L L+L N L L ++ +L
Sbjct: 171 IQPAHFSQFSNLKELQLHGNHLEYIPDGVFDHLVGLTKLNLGKNSLTHLSPRIFQRLGNL 230
Query: 634 HILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTT 813
+L L N+L +P G L+ L L+ N++ +L G L+ L+L+NN ++
Sbjct: 231 QVLRLYENRLSEIPMGTFDGCGNLQELALQQNQIGMLSPGLFHNNRNLQKLYLSNNHISQ 290
Query: 814 LAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASL 912
L G F L L+ L L NSL + G++ +
Sbjct: 291 LPPGIFMQLPQLNRLTLFGNSLKELSPGIFGPM 323
Score = 68.9 bits (167), Expect = 9e-12
Identities = 54/192 (28%), Positives = 80/192 (41%)
Frame = +1
Query: 340 NLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRL 519
N L + N + +L+ L + L L + +N L + PG F
Sbjct: 85 NAMSLQILNTHITELNESPFLNISALIALRIEKNELSHIMPGAF---------------- 128
Query: 520 DILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPL 699
R L +LR+L L+ N+L+ LP L +L L L +NQL + P
Sbjct: 129 --------RNLGSLRYLSLANNKLQVLPIGLFQGLNNLESLLLSSNQLVQIQPAHFSQFS 180
Query: 700 KLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSL 879
L+ L L GN L+ + +G L L L N LT L+ F+ L L +L L N L
Sbjct: 181 NLKELQLHGNHLEYIPDGVFDHLVGLTKLNLGKNSLTHLSPRIFQRLGNLQVLRLYENRL 240
Query: 880 TSVPEGLWASLG 915
+ +P G + G
Sbjct: 241 SEIPMGTFDGCG 252
Score = 56.2 bits (134), Expect = 6e-08
Identities = 35/119 (29%), Positives = 58/119 (48%), Gaps = 3/119 (2%)
Frame = +1
Query: 298 NLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKV 477
++T +P ++ + LQ L LS NQ+ +S + +L+ L L NAL+ L +F++
Sbjct: 335 HITSLPDNVFSNLHQLQVLILSRNQINYISPDAFNGLVELRELSLHTNALQELDGSVFRM 394
Query: 478 SAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKL---LANFTDLHILD 645
L + L+ NRL L + + L + L NQL LP + L N +L + D
Sbjct: 395 LVNLQNISLQNNRLRQLPGNIFANVNGLMTIQLQNNQLENLPMGIFDHLGNLCELRLYD 453
>ref|XP_538355.2| PREDICTED: similar to Ran GTPase-activating protein 1 [Canis
familiaris].
Length = 1323
Score = 112 bits (280), Expect = 7e-25
Identities = 89/261 (34%), Positives = 130/261 (49%), Gaps = 2/261 (0%)
Frame = +1
Query: 235 PPAKFPHYLPADTIYLATEFFNLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQ 414
P A FP + L + + ++ A L G+ +L L+LS+N+L LSA L P+
Sbjct: 1020 PRAAFPGL--GGLVSLHLQHCGIAELEAGALAGLASLIYLYLSDNRLAGLSAAALEGAPR 1077
Query: 415 LKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLR 594
L L L RN +R+P + L +L L+ N ++ L+ L G +ALR L LS N++
Sbjct: 1078 LAYLYLERNRFQRVPGTALRALPGLFSLHLQHNAVERLEPGDLAGSQALRWLYLSANRIS 1137
Query: 595 TLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAP-QP 771
+ + DL L L NQLQ +P L G L L L GN L+ L +G P
Sbjct: 1138 HVSPGAIGPAPDLEKLYLDRNQLQGVPTVALEGLPTLLELQLSGNPLRALPDGAFRPVGG 1197
Query: 772 KLRYLFLNNNKLTTLAAGAFRGL-QVLDMLDLSNNSLTSVPEGLWASLGKAAGNMKVGFE 948
L++LFLN++ L ++ AF GL L L L N L ++P S + +
Sbjct: 1198 SLQHLFLNSSGLEQISPRAFSGLGPWLQSLHLQKNQLQAMPALPHLSQLEL-------ID 1250
Query: 949 ISGNPWICDQKLNDLYRWLCG 1011
+SGNP+ CD +L L+RWL G
Sbjct: 1251 LSGNPFHCDCQLLPLHRWLIG 1271
Score = 97.8 bits (242), Expect = 2e-20
Identities = 94/289 (32%), Positives = 124/289 (42%)
Frame = +1
Query: 214 GSSISCQPPAKFPHYLPADTIYLATEFFNLTQMPADILQGIPNLQELHLSNNQLEDLSAK 393
G+ + PPA F LP T +L + + +G+ LQ L+L++N+L L +
Sbjct: 653 GNLLKVIPPAAFRD-LPYLT-HLDLRHCQVELVAEGAFRGLGRLQILNLASNRLSSLPQE 710
Query: 394 FLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLD 573
L + L+ LDL RN L+ L PG F AL TL L N L L A +GL R L
Sbjct: 711 ALDGLGSLQRLDLERNVLEELRPGTFGALGALTTLNLAHNALVYLPAMTFQGLPRARWLR 770
Query: 574 LSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEG 753
LS N L L + LA L L L +N+LQ LP L L L L N + E
Sbjct: 771 LSHNALSVLDPEALAGLPALRRLSLQHNELQALPGLALSQARALARLELGHNPFTYVGEE 830
Query: 754 FLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASLGKAAGNM 933
P LR L L + L L A AF L LDL N L +VP + G +
Sbjct: 831 DGLALPGLRELTLEHGALQALDARAFARCPRLHTLDLRGNQLDTVPP------LQGPGQL 884
Query: 934 KVGFEISGNPWICDQKLNDLYRWLCGQRKTRCFFQNNTSLCWPQKALGG 1080
+ + GNP C + L WL R ++ C + LGG
Sbjct: 885 R-RLRLHGNPLWCGCRARPLLEWLARAR------VHSDGACRGPRRLGG 926
Score = 85.1 bits (209), Expect = 1e-16
Identities = 69/207 (33%), Positives = 93/207 (44%), Gaps = 1/207 (0%)
Frame = +1
Query: 277 YLATEFFNLTQMPADILQGIPNL-QELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKR 453
++A NLT++P +P L Q L L N L+ + +P L LDL ++
Sbjct: 627 HVACRHQNLTEVP----DAVPELTQRLDLQGNLLKVIPPAAFRDLPYLTHLDLRHCQVEL 682
Query: 454 LPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDL 633
+ G F+ L L L NRL L L GL +L+ LDL N L L L
Sbjct: 683 VAEGAFRGLGRLQILNLASNRLSSLPQEALDGLGSLQRLDLERNVLEELRPGTFGALGAL 742
Query: 634 HILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTT 813
L+L +N L LP +G + WL L N L VL+ LA P LR L L +N+L
Sbjct: 743 TTLNLAHNALVYLPAMTFQGLPRARWLRLSHNALSVLDPEALAGLPALRRLSLQHNELQA 802
Query: 814 LAAGAFRGLQVLDMLDLSNNSLTSVPE 894
L A + L L+L +N T V E
Sbjct: 803 LPGLALSQARALARLELGHNPFTYVGE 829
Score = 58.5 bits (140), Expect = 1e-08
Identities = 51/169 (30%), Positives = 77/169 (45%)
Frame = +1
Query: 415 LKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLR 594
LK LD A +R PP + H +N ++ DA + + LDL GN L+
Sbjct: 603 LKDLDGAGTA-QRCPPTCVCDNPRRHVACRHQNLTEVPDAV----PELTQRLDLQGNLLK 657
Query: 595 TLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPK 774
+P + L LDL + Q++ + RG +L+ L+L NRL L + L
Sbjct: 658 VIPPAAFRDLPYLTHLDLRHCQVELVAEGAFRGLGRLQILNLASNRLSSLPQEALDGLGS 717
Query: 775 LRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASLGKA 921
L+ L L N L L G F L L L+L++N+L +P + L +A
Sbjct: 718 LQRLDLERNVLEELRPGTFGALGALTTLNLAHNALVYLPAMTFQGLPRA 766
>ref|XP_547189.2| PREDICTED: similar to insulin-like growth factor binding protein,
acid labile subunit [Canis familiaris].
Length = 676
Score = 104 bits (260), Expect = 1e-22
Identities = 70/206 (33%), Positives = 106/206 (51%)
Frame = +1
Query: 301 LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVS 480
L +P QG+ +L+EL L+ N+L L + +L+ LDL+RNAL+ + +F
Sbjct: 253 LAVLPDAAFQGLASLRELVLAGNKLAYLQPPLFCGLGELRELDLSRNALRSVKANVFVKL 312
Query: 481 AALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQ 660
L L L N + + G+KALR LDLS N++ L LH+L L +N
Sbjct: 313 PKLQKLYLDHNVIAAVAPGAFLGMKALRWLDLSHNRVAGLLEDTFPGLLGLHVLRLSHNA 372
Query: 661 LQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGL 840
+ L P R LE L L NR++ L + +L L LN+N++ + AGAF GL
Sbjct: 373 IAGLRPRTFRDLHFLEELRLGHNRIRQLPDKAFEGLGQLEVLTLNDNQIREIEAGAFVGL 432
Query: 841 QVLDMLDLSNNSLTSVPEGLWASLGK 918
+ +++LS N L S+PE + LG+
Sbjct: 433 LSVAVMNLSGNCLRSLPERTFQGLGR 458
Score = 99.8 bits (247), Expect = 5e-21
Identities = 79/248 (31%), Positives = 112/248 (45%), Gaps = 4/248 (1%)
Frame = +1
Query: 181 PNACLVFHSS--NGSSISCQPP--AKFPHYLPADTIYLATEFFNLTQMPADILQGIPNLQ 348
P AC H + S+ C P +PA L + NL +P Q + +L
Sbjct: 113 PAACTCGHDDYMDELSVFCSSRNLTSVPDGIPAGARALWLDGNNLFSIPEAAFQNLSSLG 172
Query: 349 ELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLDIL 528
L+L + L L + LL + QL+ L L RN L+ L F + L +L L N L +
Sbjct: 173 FLNLQGSGLASLEPRALLGLQQLRHLHLERNQLRGLGAHTFLHTPGLASLGLSNNMLGRV 232
Query: 529 DASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLE 708
D RGL L L L N L LP L L L N+L L P L G +L
Sbjct: 233 DEGLFRGLADLWDLHLGWNGLAVLPDAAFQGLASLRELVLAGNKLAYLQPPLFCGLGELR 292
Query: 709 WLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSV 888
L L N L+ ++ PKL+ L+L++N + +A GAF G++ L LDLS+N + +
Sbjct: 293 ELDLSRNALRSVKANVFVKLPKLQKLYLDHNVIAAVAPGAFLGMKALRWLDLSHNRVAGL 352
Query: 889 PEGLWASL 912
E + L
Sbjct: 353 LEDTFPGL 360
Score = 98.6 bits (244), Expect = 1e-20
Identities = 72/226 (31%), Positives = 113/226 (50%)
Frame = +1
Query: 211 NGSSISCQPPAKFPHYLPADTIYLATEFFNLTQMPADILQGIPNLQELHLSNNQLEDLSA 390
+G+++ P A F + + +L + L + L G+ L+ LHL NQL L A
Sbjct: 153 DGNNLFSIPEAAFQNL--SSLGFLNLQGSGLASLEPRALLGLQQLRHLHLERNQLRGLGA 210
Query: 391 KFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHL 570
L P L L L+ N L R+ GLF+ A L L L N L +L + +GL +LR L
Sbjct: 211 HTFLHTPGLASLGLSNNMLGRVDEGLFRGLADLWDLHLGWNGLAVLPDAAFQGLASLREL 270
Query: 571 DLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEE 750
L+GN+L L L +L LDL N L+++ ++ KL+ L+L+ N + +
Sbjct: 271 VLAGNKLAYLQPPLFCGLGELRELDLSRNALRSVKANVFVKLPKLQKLYLDHNVIAAVAP 330
Query: 751 GFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSV 888
G LR+L L++N++ L F GL L +L LS+N++ +
Sbjct: 331 GAFLGMKALRWLDLSHNRVAGLLEDTFPGLLGLHVLRLSHNAIAGL 376
Score = 93.2 bits (230), Expect = 4e-19
Identities = 72/237 (30%), Positives = 110/237 (46%), Gaps = 6/237 (2%)
Frame = +1
Query: 301 LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVS 480
+ Q+P +G+ L+ L L++NQ+ ++ A + + + V++L+ N L+ LP F+
Sbjct: 397 IRQLPDKAFEGLGQLEVLTLNDNQIREIEAGAFVGLLSVAVMNLSGNCLRSLPERTFQGL 456
Query: 481 AALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQ 660
LH+L L+ L + GL LR L L N + + + L +L LDL N+
Sbjct: 457 GRLHSLHLERGCLGRVRPHAFAGLSGLRRLFLKHNGITAVDEQGLWGLAELLELDLTANR 516
Query: 661 LQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGL 840
L LP +G KLE+L L GN+L L L P +L +L +++N+L L G L
Sbjct: 517 LTHLPARAFQGLGKLEYLLLSGNQLAALAADSLRPLRRLFWLDVSHNRLEALPDGELAEL 576
Query: 841 QVLDMLDLSNNSL------TSVPEGLWASLGKAAGNMKVGFEISGNPWICDQKLNDL 993
L L L+NNSL + E LW + NPW C L L
Sbjct: 577 GQLRYLSLTNNSLRIFTPPATGLERLW---------------LGDNPWDCGCALGAL 618
Score = 85.9 bits (211), Expect = 7e-17
Identities = 63/202 (31%), Positives = 94/202 (46%), Gaps = 1/202 (0%)
Frame = +1
Query: 301 LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVS 480
L + A++ +P LQ+L+L +N + ++ L + L+ LDL+ N + L F
Sbjct: 301 LRSVKANVFVKLPKLQKLYLDHNVIAAVAPGAFLGMKALRWLDLSHNRVAGLLEDTFPGL 360
Query: 481 AALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQ 660
LH L L N + L R L L L L N++R LP K L +L L +NQ
Sbjct: 361 LGLHVLRLSHNAIAGLRPRTFRDLHFLEELRLGHNRIRQLPDKAFEGLGQLEVLTLNDNQ 420
Query: 661 LQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGL 840
++ + G L + ++L GN L+ L E +L L L L + AF GL
Sbjct: 421 IREIEAGAFVGLLSVAVMNLSGNCLRSLPERTFQGLGRLHSLHLERGCLGRVRPHAFAGL 480
Query: 841 QVLDMLDLSNNSLTSVPE-GLW 903
L L L +N +T+V E GLW
Sbjct: 481 SGLRRLFLKHNGITAVDEQGLW 502
Score = 77.8 bits (190), Expect = 2e-14
Identities = 63/167 (37%), Positives = 78/167 (46%)
Frame = +1
Query: 418 KVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRT 597
+ L L N L +P F+ ++L L L+ + L L+ L GL+ LRHL L NQLR
Sbjct: 148 RALWLDGNNLFSIPEAAFQNLSSLGFLNLQGSGLASLEPRALLGLQQLRHLHLERNQLRG 207
Query: 598 LPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKL 777
L + L L L NN L + L RG L LHL N L VL + L
Sbjct: 208 LGAHTFLHTPGLASLGLSNNMLGRVDEGLFRGLADLWDLHLGWNGLAVLPDAAFQGLASL 267
Query: 778 RYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASLGK 918
R L L NKL L F GL L LDLS N+L SV ++ L K
Sbjct: 268 RELVLAGNKLAYLQPPLFCGLGELRELDLSRNALRSVKANVFVKLPK 314
>ref|XP_542026.2| PREDICTED: similar to Fibromodulin precursor (FM) (Collagen-binding
59 kDa protein) (Keratan sulfate proteoglycan
fibromodulin) (KSPG fibromodulin) [Canis familiaris].
Length = 593
Score = 102 bits (255), Expect = 6e-22
Identities = 86/227 (37%), Positives = 120/227 (52%), Gaps = 7/227 (3%)
Frame = +1
Query: 214 GSSISCQPPAKFPHYLPADTIYLATEFFNLTQMPADILQGIPNLQELHLSNNQLED--LS 387
G+ + PPA LP L ++T + A L G+ L EL+L+ N+L +
Sbjct: 358 GNGLHRVPPA-----LPRRLRALVLPHNHVTTLGARDLAGLRGLAELNLAYNRLVSARVH 412
Query: 388 AKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRH 567
+ P+ L+ LDL N L RLP GL +L TL L+ N+L L+ L GL LR
Sbjct: 413 RRAFRPLRALRSLDLAGNQLTRLPGGL---PGSLRTLRLQRNQLRALEPELLAGLDQLRE 469
Query: 568 LDLSGNQLRT--LPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRL-Q 738
L L+ N+LR + L +LDL +N+L +PPDL P LE LHL+GNR+
Sbjct: 470 LSLAHNRLRIGDIGPGTWHELQALQVLDLSHNELSFVPPDL---PEALEELHLQGNRIGH 526
Query: 739 VLEEGFLAPQPKLRYLFLNNNKL--TTLAAGAFRGLQVLDMLDLSNN 873
V E FL+ P+LR LFL N+L T++A AF GL L ++D + N
Sbjct: 527 VGSEAFLS-TPRLRALFLRANRLHMTSIAPEAFLGLLHLRVVDTAGN 572
Score = 97.4 bits (241), Expect = 2e-20
Identities = 92/261 (35%), Positives = 123/261 (47%), Gaps = 9/261 (3%)
Frame = +1
Query: 157 SAKGVTPDPNACLVFHSSNGS---SISCQPPAKFPHYLPADTIYLATEFFNLTQMPADIL 327
S G+ PD FH S S+S + P LP L + ++++P L
Sbjct: 194 SNAGLPPD-----AFHGSEAVATLSLSSNRLSYLPPSLPPSLERLHLQNNLISKVPRGAL 248
Query: 328 QGIPNLQELHLSNNQLED--LSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLV 501
+L+EL+L +NQL D L A + L+ LDL+ N L +P GL + A LH
Sbjct: 249 SRQTHLRELYLQHNQLTDSGLDATTFSKLRHLEYLDLSHNQLASVPAGLPRTLAVLH--- 305
Query: 502 LKENRLDILDASWLRGLKALRHLDLSGNQLRT--LPRKLLANFTDLHILDLGNNQLQTLP 675
L NR+ ++A+ LRG + LR+L L NQL LP L LH L L N L +P
Sbjct: 306 LGRNRIRWVEAARLRGARGLRYLLLQHNQLGAEGLPAGALRPLRGLHTLHLYGNGLHRVP 365
Query: 676 PDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAG--AFRGLQVL 849
P L P +L L L N + L LA L L L N+L + AFR L+ L
Sbjct: 366 PAL---PRRLRALVLPHNHVTTLGARDLAGLRGLAELNLAYNRLVSARVHRRAFRPLRAL 422
Query: 850 DMLDLSNNSLTSVPEGLWASL 912
LDL+ N LT +P GL SL
Sbjct: 423 RSLDLAGNQLTRLPGGLPGSL 443
Score = 84.0 bits (206), Expect = 3e-16
Identities = 82/259 (31%), Positives = 113/259 (43%), Gaps = 27/259 (10%)
Frame = +1
Query: 205 SSNGSSISCQPPAKFPHYLPADTIYLATEFFNLTQMPADILQGIPNLQELHLSNNQLEDL 384
SS +C P P ADT+ +L P +I + Q L L NNQL++L
Sbjct: 50 SSQPPPRACPPRCSCPR---ADTV--DCNGLDLQVFPDNITRAA---QHLSLQNNQLQEL 101
Query: 385 SAKFLLPVPQLKVLDLTRNALKR--LPPGLFKVSAALHTLVLKENRLDILDASWLRGLK- 555
L + L+ L+L N + LP F+ L + + N+L + R L+
Sbjct: 102 PYNELSRLRSLRTLNLHNNLISSEGLPDEAFESLTQLQHIYVAHNKLSVAPQFLPRSLRV 161
Query: 556 --------------------ALRHLDLSGNQLRT--LPRKLLANFTDLHILDLGNNQLQT 669
ALR + L NQL LP + L L +N+L
Sbjct: 162 ADLAANQVTEIFPLTFGEKPALRSVYLHNNQLSNAGLPPDAFHGSEAVATLSLSSNRLSY 221
Query: 670 LPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTT--LAAGAFRGLQ 843
LPP L P LE LHL+ N + + G L+ Q LR L+L +N+LT L A F L+
Sbjct: 222 LPPSL---PPSLERLHLQNNLISKVPRGALSRQTHLRELYLQHNQLTDSGLDATTFSKLR 278
Query: 844 VLDMLDLSNNSLTSVPEGL 900
L+ LDLS+N L SVP GL
Sbjct: 279 HLEYLDLSHNQLASVPAGL 297
Score = 54.3 bits (129), Expect = 2e-07
Identities = 41/145 (28%), Positives = 67/145 (46%), Gaps = 25/145 (17%)
Frame = +1
Query: 553 KALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQT--LPPDLLRGPLKLEWLHLEG 726
+A +HL L NQL+ LP L+ L L+L NN + + LP + +L+ +++
Sbjct: 86 RAAQHLSLQNNQLQELPYNELSRLRSLRTLNLHNNLISSEGLPDEAFESLTQLQHIYVAH 145
Query: 727 NRLQVLEEGF---------------------LAPQPKLRYLFLNNNKLTT--LAAGAFRG 837
N+L V + +P LR ++L+NN+L+ L AF G
Sbjct: 146 NKLSVAPQFLPRSLRVADLAANQVTEIFPLTFGEKPALRSVYLHNNQLSNAGLPPDAFHG 205
Query: 838 LQVLDMLDLSNNSLTSVPEGLWASL 912
+ + L LS+N L+ +P L SL
Sbjct: 206 SEAVATLSLSSNRLSYLPPSLPPSL 230
>ref|XP_855323.1| PREDICTED: similar to Extracellular matrix protein 2 precursor
(Matrix glycoprotein SC1/ECM2) [Canis familiaris].
Length = 606
Score = 100 bits (248), Expect = 4e-21
Identities = 93/259 (35%), Positives = 130/259 (50%), Gaps = 13/259 (5%)
Frame = +1
Query: 163 KGVTPDPNACLVFHSSNGSSISCQPPAKFPHYLPA------DTIYLATEFFNLTQMPADI 324
+ + P P +CL+ ++ I+C K H +PA T+YLA + ++PA
Sbjct: 274 QAMPPLPASCLLARAA----IACSN-VKMKH-IPALTDPGLATLYLAEN--EIAKIPAHA 325
Query: 325 LQGIPNLQELHLSNNQL--EDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTL 498
+G+PNLQ L LS N+L + L + +LK L+L N+L +P + A+L L
Sbjct: 326 FRGLPNLQWLDLSKNKLDAQGLHPDAFKNLTRLKRLNLDGNSLAAVP----ALPASLQEL 381
Query: 499 VLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLH---ILDLGNNQLQT 669
L +N L L S RGL L L++ GNQL LA F LH L L N L+T
Sbjct: 382 KLNDNVLQGLQHSSFRGLSRLLTLEVEGNQLHDGNISPLA-FQPLHSLLYLRLDRNHLRT 440
Query: 670 LPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKL--TTLAAGAFRGLQ 843
+PP L P L LHL N ++ + EG L L L L+NN+L LA A+ L
Sbjct: 441 IPPGL---PASLRELHLGTNVIEEVTEGMLNHSHSLSVLVLSNNQLQEDRLAPRAWTDLP 497
Query: 844 VLDMLDLSNNSLTSVPEGL 900
L++LDLS+N L VP L
Sbjct: 498 KLEVLDLSHNRLARVPSSL 516
Score = 57.0 bits (136), Expect = 4e-08
Identities = 58/186 (31%), Positives = 82/186 (44%), Gaps = 2/186 (1%)
Frame = +1
Query: 361 SNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLDI--LDA 534
SN +++ + A L P L L L N + ++P F+ L L L +N+LD L
Sbjct: 293 SNVKMKHIPA---LTDPGLATLYLAENEIAKIPAHAFRGLPNLQWLDLSKNKLDAQGLHP 349
Query: 535 SWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWL 714
+ L L+ L+L GN L +P A L L L +N LQ L RG +L L
Sbjct: 350 DAFKNLTRLKRLNLDGNSLAAVP----ALPASLQELKLNDNVLQGLQHSSFRGLSRLLTL 405
Query: 715 HLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPE 894
+EGN+L +G ++P AF+ L L L L N L ++P
Sbjct: 406 EVEGNQLH---DGNISPL-------------------AFQPLHSLLYLRLDRNHLRTIPP 443
Query: 895 GLWASL 912
GL ASL
Sbjct: 444 GLPASL 449
Score = 50.4 bits (119), Expect = 3e-06
Identities = 58/199 (29%), Positives = 86/199 (43%), Gaps = 44/199 (22%)
Frame = +1
Query: 202 HSSNGSSISCQPPAKFPHYLPADTIYLAT----------EFFNLTQMPADILQGIPN--- 342
H N S ++ QP YL D +L T E T + ++ +G+ N
Sbjct: 413 HDGNISPLAFQPLHSLL-YLRLDRNHLRTIPPGLPASLRELHLGTNVIEEVTEGMLNHSH 471
Query: 343 -LQELHLSNNQLED--LSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKEN 513
L L LSNNQL++ L+ + +P+L+VLDL+ N L R+P L + L L L N
Sbjct: 472 SLSVLVLSNNQLQEDRLAPRAWTDLPKLEVLDLSHNRLARVPSSLPR---GLRRLTLHHN 528
Query: 514 RLD----------------------------ILDASWLRGLKALRHLDLSGNQLRTLPRK 609
R++ I AS+L +L L L NQLR +PR
Sbjct: 529 RIERIPAYVFAHMRPGLELLRLSHNSLRTDGIRGASFLGLRSSLAELLLDHNQLRAIPRG 588
Query: 610 LLANFTDLHILDLGNNQLQ 666
LL L +L L +N+++
Sbjct: 589 LL-GLRGLQVLHLSHNEIR 606
>ref|XP_852514.1| PREDICTED: similar to Leucine-rich repeat transmembrane neuronal
protein 4 precursor isoform 2 [Canis familiaris].
Length = 519
Score = 100 bits (248), Expect = 4e-21
Identities = 83/298 (27%), Positives = 130/298 (43%), Gaps = 27/298 (9%)
Frame = +1
Query: 274 IYLATEFFNLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKR 453
I+L + ++ + D QGI L+EL LS+N++ L K PVP L+ LDL+ N L+
Sbjct: 89 IWLYLDHNYISSVDEDAFQGIRRLKELILSSNKITYLHNKTFHPVPNLRNLDLSYNKLQT 148
Query: 454 LPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDL 633
L FK GL+ L L L N L+T+P ++ + +L
Sbjct: 149 LQSEQFK------------------------GLRKLIILHLRSNSLKTVPIRVFQDCRNL 184
Query: 634 HILDLGNNQLQTLPPDLLRGPLKLEWLHLE------------------------GNRLQV 741
LDLG N+L++L + G LKL+ LHLE NR++
Sbjct: 185 DFLDLGYNRLRSLSRNAFAGLLKLKELHLEHNQFSKINFAHFPRLFNLRSIYLQWNRIRS 244
Query: 742 LEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPE---GLWASL 912
+ +G L L L+ N + + G F+ L L L+L +N LT++ + W SL
Sbjct: 245 ISQGLTWTWSSLHNLDLSGNDIQGIEPGTFKCLPNLQKLNLDSNKLTNISQETVNAWISL 304
Query: 913 GKAAGNMKVGFEISGNPWICDQKLNDLYRWLCGQRKTRCFFQNNTSLCWPQKALGGAK 1086
+ +SGN W C + + L+ WL + + +T +C K + G K
Sbjct: 305 --------ISITLSGNMWECSRSICPLFYWLKNFKGNK----ESTMICAGPKHIQGEK 350
>ref|XP_540206.2| PREDICTED: similar to Leucine-rich repeat transmembrane neuronal
protein 4 precursor isoform 1 [Canis familiaris].
Length = 518
Score = 100 bits (248), Expect = 4e-21
Identities = 83/298 (27%), Positives = 130/298 (43%), Gaps = 27/298 (9%)
Frame = +1
Query: 274 IYLATEFFNLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKR 453
I+L + ++ + D QGI L+EL LS+N++ L K PVP L+ LDL+ N L+
Sbjct: 88 IWLYLDHNYISSVDEDAFQGIRRLKELILSSNKITYLHNKTFHPVPNLRNLDLSYNKLQT 147
Query: 454 LPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDL 633
L FK GL+ L L L N L+T+P ++ + +L
Sbjct: 148 LQSEQFK------------------------GLRKLIILHLRSNSLKTVPIRVFQDCRNL 183
Query: 634 HILDLGNNQLQTLPPDLLRGPLKLEWLHLE------------------------GNRLQV 741
LDLG N+L++L + G LKL+ LHLE NR++
Sbjct: 184 DFLDLGYNRLRSLSRNAFAGLLKLKELHLEHNQFSKINFAHFPRLFNLRSIYLQWNRIRS 243
Query: 742 LEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPE---GLWASL 912
+ +G L L L+ N + + G F+ L L L+L +N LT++ + W SL
Sbjct: 244 ISQGLTWTWSSLHNLDLSGNDIQGIEPGTFKCLPNLQKLNLDSNKLTNISQETVNAWISL 303
Query: 913 GKAAGNMKVGFEISGNPWICDQKLNDLYRWLCGQRKTRCFFQNNTSLCWPQKALGGAK 1086
+ +SGN W C + + L+ WL + + +T +C K + G K
Sbjct: 304 --------ISITLSGNMWECSRSICPLFYWLKNFKGNK----ESTMICAGPKHIQGEK 349
>ref|XP_546127.2| PREDICTED: similar to Leucine-rich repeat transmembrane neuronal
protein 3 precursor isoform 1 [Canis familiaris].
Length = 581
Score = 99.8 bits (247), Expect = 5e-21
Identities = 81/319 (25%), Positives = 142/319 (44%), Gaps = 30/319 (9%)
Frame = +1
Query: 214 GSSISC--QPPAKFPHYLPADTIYLATEFFNLTQMPADILQGIPNLQELHLSNNQLEDLS 387
G + C Q + P + A + L+ + +L ++ + +G+ L L+L +N + ++
Sbjct: 42 GKMVYCESQKLQEIPSSISAGCLGLSLRYNSLQKLKYNQFKGLNQLTWLYLDHNHISNID 101
Query: 388 AKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRH 567
+ +LK L L+ N + F+ L L L N+L L + RGL+ L
Sbjct: 102 ENAFNGIRRLKELILSSNRISYFLNNTFRPVTNLRNLDLSYNQLHSLGSEQFRGLRKLLS 161
Query: 568 LDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLE 747
L L N LRT+P ++ + +L +LDLG N++++L ++ G ++L+ LHLE N+ L
Sbjct: 162 LHLRSNSLRTIPVRIFQDCRNLELLDLGYNRIRSLARNVFAGMIRLKELHLEHNQFSKLN 221
Query: 748 EGFLAPQPKLRYLFLNNNKLTTLA---AGAFRGLQVLDM--------------------- 855
L+ L+L NK++ + + + LQ LD+
Sbjct: 222 LALFPRLVSLQNLYLQWNKISVIGQTMSWTWSSLQRLDLSGNEIEAFSGPSVFQCVPNLQ 281
Query: 856 -LDLSNNSLTSVPEGL---WASLGKAAGNMKVGFEISGNPWICDQKLNDLYRWLCGQRKT 1023
L+L +N LT + + + W SL ++GN W C + + L WL K+
Sbjct: 282 RLNLDSNKLTFIGQEILDSWISLN--------DISLAGNIWECSRNICSLVNWL----KS 329
Query: 1024 RCFFQNNTSLCWPQKALGG 1080
+ NT +C K L G
Sbjct: 330 FKGLRENTIICASPKELQG 348
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 50,953,946
Number of extensions: 1509550
Number of successful extensions: 9252
Number of sequences better than 1.0e-05: 155
Number of HSP's gapped: 8064
Number of HSP's successfully gapped: 444
Length of query: 402
Length of database: 18,874,504
Length adjustment: 105
Effective length of query: 297
Effective length of database: 15,374,224
Effective search space: 4566144528
Effective search space used: 4566144528
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-001980
(1207 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_443204.1| leucine-rich alpha-2-glycoprotein precursor [Ho... 438 e-123
Alignment gi|NP_612490.1| chondroadherin-like protein precursor [Homo sap... 115 1e-25
Alignment gi|NP_001073982.2| carboxypeptidase N subunit 2 [Homo sapiens]. 114 2e-25
Alignment gi|NP_000164.5| platelet glycoprotein Ib alpha chain precursor ... 111 1e-24
Alignment gi|NP_570843.2| leucine-rich repeat-containing protein 15 isofo... 110 3e-24
Alignment gi|NP_001128529.2| leucine-rich repeat-containing protein 15 is... 110 3e-24
Alignment gi|NP_001139478.1| insulin-like growth factor-binding protein c... 108 8e-24
Alignment gi|NP_004961.1| insulin-like growth factor-binding protein comp... 108 8e-24
Alignment gi|NP_004479.1| platelet glycoprotein V precursor [Homo sapiens]. 102 7e-22
Alignment gi|NP_079269.4| leucine-rich repeat transmembrane neuronal prot... 100 4e-21
>ref|NP_443204.1| leucine-rich alpha-2-glycoprotein precursor [Homo sapiens].
Length = 347
Score = 438 bits (1126), Expect = e-123
Identities = 224/338 (66%), Positives = 259/338 (76%)
Frame = +1
Query: 64 MSSWSPEGKQSPGSWEPHLCRIXXXXXXXXXSAKGVTPDPNACLVFHSSNGSSISCQPPA 243
MSSWS + +SPG +PH+ R SA GVT P C VF S +GSSISCQPPA
Sbjct: 1 MSSWSRQRPKSPGGIQPHVSRTLFLLLLLAASAWGVTLSPKDCQVFRSDHGSSISCQPPA 60
Query: 244 KFPHYLPADTIYLATEFFNLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKV 423
+ P YLPADT++LA EFFNLT +PA++LQG LQELHLS+N LE LS +FL PVPQL+V
Sbjct: 61 EIPGYLPADTVHLAVEFFNLTHLPANLLQGASKLQELHLSSNGLESLSPEFLRPVPQLRV 120
Query: 424 LDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLP 603
LDLTRNAL LPPGLF+ SA L TLVLKEN+L++L+ SWL GLKAL HLDLSGN+LR LP
Sbjct: 121 LDLTRNALTGLPPGLFQASATLDTLVLKENQLEVLEVSWLHGLKALGHLDLSGNRLRKLP 180
Query: 604 RKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRY 783
LLANFT L LDLG NQL+TLPPDLLRGPL+LE LHLEGN+LQVL + L PQP LRY
Sbjct: 181 PGLLANFTLLRTLDLGENQLETLPPDLLRGPLQLERLHLEGNKLQVLGKDLLLPQPDLRY 240
Query: 784 LFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASLGKAAGNMKVGFEISGNP 963
LFLN NKL +AAGAF+GL+ LDMLDLSNNSL SVPEGLWASLG+ +M+ GF+ISGNP
Sbjct: 241 LFLNGNKLARVAAGAFQGLRQLDMLDLSNNSLASVPEGLWASLGQPNWDMRDGFDISGNP 300
Query: 964 WICDQKLNDLYRWLCGQRKTRCFFQNNTSLCWPQKALG 1077
WICDQ L+DLYRWL Q K + F QN+T P+ G
Sbjct: 301 WICDQNLSDLYRWLQAQ-KDKMFSQNDTRCAGPEAVKG 337
>ref|NP_612490.1| chondroadherin-like protein precursor [Homo sapiens].
Length = 762
Score = 115 bits (287), Expect = 1e-25
Identities = 97/309 (31%), Positives = 141/309 (45%), Gaps = 26/309 (8%)
Frame = +1
Query: 163 KGVTPDPNACLVFHSSNGSSISCQPPAKFPHYLPADT----------------------- 273
+ V P P AC+ S SS P P+DT
Sbjct: 391 RAVAPCPRACVCVPESRHSSCEGCGLQAVPRGFPSDTQLLDLRRNHFPSVPRAAFPGLGH 450
Query: 274 -IYLATEFFNLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALK 450
+ L + + ++ A L G+ L L+LS+NQL LSA L P+L L L RN
Sbjct: 451 LVSLHLQHCGIAELEAGALAGLGRLIYLYLSDNQLAGLSAAALEGAPRLGYLYLERNRFL 510
Query: 451 RLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTD 630
++P + +L +L L++N +D L L +ALR + LSGN++ + L +
Sbjct: 511 QVPGAALRALPSLFSLHLQDNAVDRLAPGDLGRTRALRWVYLSGNRITEVSLGALGPARE 570
Query: 631 LHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPK-LRYLFLNNNKL 807
L L L NQL+ +P L G L L L GN L+ L +G P + L++LFLN++ L
Sbjct: 571 LEKLHLDRNQLREVPTGALEGLPALLELQLSGNPLRALRDGAFQPVGRSLQHLFLNSSGL 630
Query: 808 TTLAAGAFRGL-QVLDMLDLSNNSLTSVPEGLWASLGKAAGNMKVGFEISGNPWICDQKL 984
+ GAF GL L L L N L ++P SL + ++S NP+ CD +L
Sbjct: 631 EQICPGAFSGLGPGLQSLHLQKNQLRALP--ALPSLSQLE-----LIDLSSNPFHCDCQL 683
Query: 985 NDLYRWLCG 1011
L+RWL G
Sbjct: 684 LPLHRWLTG 692
Score = 96.3 bits (238), Expect = 5e-20
Identities = 93/303 (30%), Positives = 126/303 (41%), Gaps = 24/303 (7%)
Frame = +1
Query: 181 PNACLVFHSSNGSSISCQPPAKFPHYLPADTIYLATEFFNLTQMPADILQGIPNLQELHL 360
P AC+ +S + Q + P +P T L + L +PA QG+P+L L L
Sbjct: 34 PQACICDNSRRHVACRYQNLTEVPDAIPELTQRLDLQGNLLKVIPAAAFQGVPHLTHLDL 93
Query: 361 SNNQLE----------------DLSAKFLLPVPQ--------LKVLDLTRNALKRLPPGL 468
+ ++E +L++ L +PQ L+ L+L NAL+ L PG
Sbjct: 94 RHCEVELVAEGAFRGLGRLLLLNLASNHLRELPQEALDGLGSLRRLELEGNALEELRPGT 153
Query: 469 FKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDL 648
F AL TL L N L L A +GL +R L LS N L L + LA L L L
Sbjct: 154 FGALGALATLNLAHNALVYLPAMAFQGLLRVRWLRLSHNALSVLAPEALAGLPALRRLSL 213
Query: 649 GNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGA 828
+N+LQ LP +L L L L N L E P LR L L+ L L A
Sbjct: 214 HHNELQALPGPVLSQARGLARLELGHNPLTYAGEEDGLALPGLRELLLDGGALQALGPRA 273
Query: 829 FRGLQVLDMLDLSNNSLTSVPEGLWASLGKAAGNMKVGFEISGNPWICDQKLNDLYRWLC 1008
F L LDL N L ++P + G ++ + GNP C + L WL
Sbjct: 274 FAHCPRLHTLDLRGNQLDTLPP------LQGPGQLR-RLRLQGNPLWCGCQARPLLEWLA 326
Query: 1009 GQR 1017
R
Sbjct: 327 RAR 329
>ref|NP_001073982.2| carboxypeptidase N subunit 2 [Homo sapiens].
Length = 545
Score = 114 bits (284), Expect = 2e-25
Identities = 86/289 (29%), Positives = 126/289 (43%), Gaps = 24/289 (8%)
Frame = +1
Query: 211 NGSSISCQPPAKFPHYLPADTIYLATEFFNLTQMPADILQGIPNLQELHLSNNQLEDLSA 390
N + + P F H ++++L L +P + Q + +L+ L+L+ N L L
Sbjct: 129 NFNMLEALPEGLFQHLAALESLHLQGN--QLQALPRRLFQPLTHLKTLNLAQNLLAQLPE 186
Query: 391 KFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHL 570
+ P+ L+ L L+ NAL LP G+F +L L L N + L L L L
Sbjct: 187 ELFHPLTSLQTLKLSNNALSGLPQGVFGKLGSLQELFLDSNNISELPPQVFSQLFCLERL 246
Query: 571 DLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEE 750
L N + LP + A+ +L L L N L+ LP L L L L N+L+ + E
Sbjct: 247 WLQRNAITHLPLSIFASLGNLTFLSLQWNMLRVLPAGLFAHTPCLVGLSLTHNQLETVAE 306
Query: 751 GFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQ------------------------VLDML 858
G A LR L L+ N +T L AG FR L+ L++L
Sbjct: 307 GTFAHLSNLRSLMLSYNAITHLPAGIFRDLEELVKLYLGSNNLTALHPALFQNLSKLELL 366
Query: 859 DLSNNSLTSVPEGLWASLGKAAGNMKVGFEISGNPWICDQKLNDLYRWL 1005
LS N LT++PEG++ + + GNPW CD L L+ WL
Sbjct: 367 SLSKNQLTTLPEGIFDT-----NYNLFNLALHGNPWQCDCHLAYLFNWL 410
Score = 100 bits (248), Expect = 4e-21
Identities = 72/226 (31%), Positives = 106/226 (46%)
Frame = +1
Query: 238 PAKFPHYLPADTIYLATEFFNLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQL 417
P P Y + I++ T F T + PNL ++ N QL +P+L
Sbjct: 44 PLDIPPYTK-NIIFVETSF---TTLETRAFGSNPNLTKVVFLNTQLCQFRPDAFGGLPRL 99
Query: 418 KVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRT 597
+ L++T ++ L +F +L L L N L+ L + L AL L L GNQL+
Sbjct: 100 EDLEVTGSSFLNLSTNIFSNLTSLGKLTLNFNMLEALPEGLFQHLAALESLHLQGNQLQA 159
Query: 598 LPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKL 777
LPR+L T L L+L N L LP +L L+ L L N L L +G L
Sbjct: 160 LPRRLFQPLTHLKTLNLAQNLLAQLPEELFHPLTSLQTLKLSNNALSGLPQGVFGKLGSL 219
Query: 778 RYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASLG 915
+ LFL++N ++ L F L L+ L L N++T +P ++ASLG
Sbjct: 220 QELFLDSNNISELPPQVFSQLFCLERLWLQRNAITHLPLSIFASLG 265
>ref|NP_000164.5| platelet glycoprotein Ib alpha chain precursor [Homo sapiens].
Length = 652
Score = 111 bits (278), Expect = 1e-24
Identities = 85/236 (36%), Positives = 118/236 (50%)
Frame = +1
Query: 298 NLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKV 477
NLT +P D+ + + LHLS N L S L+P +L L+L R L +L
Sbjct: 37 NLTALPPDLPK---DTTILHLSENLLYTFSLATLMPYTRLTQLNLDRCELTKLQ------ 87
Query: 478 SAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNN 657
+D + L L LDLS NQL++LP L L +LD+ N
Sbjct: 88 ----------------VDGT----LPVLGTLDLSHNQLQSLPL-LGQTLPALTVLDVSFN 126
Query: 658 QLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRG 837
+L +LP LRG +L+ L+L+GN L+ L G L P PKL L L NN LT L AG G
Sbjct: 127 RLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNG 186
Query: 838 LQVLDMLDLSNNSLTSVPEGLWASLGKAAGNMKVGFEISGNPWICDQKLNDLYRWL 1005
L+ LD L L NSL ++P+G + S ++ + GNPW+C+ ++ RWL
Sbjct: 187 LENLDTLLLQENSLYTIPKGFFGS------HLLPFAFLHGNPWLCNCEILYFRRWL 236
Score = 63.9 bits (154), Expect = 3e-10
Identities = 38/87 (43%), Positives = 49/87 (56%)
Frame = +1
Query: 259 LPADTIYLATEFFNLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTR 438
LPA T+ L F LT +P L+G+ LQEL+L N+L+ L L P P+L+ L L
Sbjct: 115 LPALTV-LDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLAN 173
Query: 439 NALKRLPPGLFKVSAALHTLVLKENRL 519
N L LP GL L TL+L+EN L
Sbjct: 174 NNLTELPAGLLNGLENLDTLLLQENSL 200
>ref|NP_570843.2| leucine-rich repeat-containing protein 15 isoform b [Homo sapiens].
Length = 581
Score = 110 bits (274), Expect = 3e-24
Identities = 75/235 (31%), Positives = 105/235 (44%)
Frame = +1
Query: 301 LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVS 480
LT +P G+ NLQEL L NQ+ LS L+ L L+ N + +LPP +F
Sbjct: 209 LTDIPMGTFDGLVNLQELALQQNQIGLLSPGLFHNNHNLQRLYLSNNHISQLPPSVFMQL 268
Query: 481 AALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQ 660
L+ L L N L L + LR L L N + +LP + +N L +L L NQ
Sbjct: 269 PQLNRLTLFGNSLKELSPGIFGPMPNLRELWLYDNHISSLPDNVFSNLRQLQVLILSRNQ 328
Query: 661 LQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGL 840
+ + P G +L L L N LQ L+ L+ + L NN+L L F +
Sbjct: 329 ISFISPGAFNGLTELRELSLHTNALQDLDGNVFRMLANLQNISLQNNRLRQLPGNIFANV 388
Query: 841 QVLDMLDLSNNSLTSVPEGLWASLGKAAGNMKVGFEISGNPWICDQKLNDLYRWL 1005
L + L NN L ++P G++ LGK + NPW CD + L WL
Sbjct: 389 NGLMAIQLQNNQLENLPLGIFDHLGKLC-----ELRLYDNPWRCDSDILPLRNWL 438
Score = 92.8 bits (229), Expect = 6e-19
Identities = 65/191 (34%), Positives = 93/191 (48%)
Frame = +1
Query: 340 NLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRL 519
NL+EL L N LE + + L L+L +N+L + P +F+ L L L ENRL
Sbjct: 150 NLKELQLHGNHLEYIPDGAFDHLVGLTKLNLGKNSLTHISPRVFQHLGNLQVLRLYENRL 209
Query: 520 DILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPL 699
+ GL L+ L L NQ+ L L N +L L L NN + LPP +
Sbjct: 210 TDIPMGTFDGLVNLQELALQQNQIGLLSPGLFHNNHNLQRLYLSNNHISQLPPSVFMQLP 269
Query: 700 KLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSL 879
+L L L GN L+ L G P P LR L+L +N +++L F L+ L +L LS N +
Sbjct: 270 QLNRLTLFGNSLKELSPGIFGPMPNLRELWLYDNHISSLPDNVFSNLRQLQVLILSRNQI 329
Query: 880 TSVPEGLWASL 912
+ + G + L
Sbjct: 330 SFISPGAFNGL 340
Score = 79.3 bits (194), Expect = 6e-15
Identities = 64/237 (27%), Positives = 103/237 (43%), Gaps = 2/237 (0%)
Frame = +1
Query: 208 SNGSSISCQPP--AKFPHYLPADTIYLATEFFNLTQMPADILQGIPNLQELHLSNNQLED 381
S S + C P LP + + L ++T++ I L L + N+L
Sbjct: 32 SRASQVECTGARIVAVPTPLPWNAMSLQILNTHITELNESPFLNISALIALRIEKNELSR 91
Query: 382 LSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKAL 561
++ + L+ L L N L+ LP GLF+ +L +L+L N+L + + L
Sbjct: 92 ITPGAFRNLGSLRYLSLANNKLQVLPIGLFQGLDSLESLLLSSNQLLQIQPAHFSQCSNL 151
Query: 562 RHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQV 741
+ L L GN L +P + L L+LG N L + P + + L+ L L NRL
Sbjct: 152 KELQLHGNHLEYIPDGAFDHLVGLTKLNLGKNSLTHISPRVFQHLGNLQVLRLYENRLTD 211
Query: 742 LEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASL 912
+ G L+ L L N++ L+ G F L L LSNN ++ +P ++ L
Sbjct: 212 IPMGTFDGLVNLQELALQQNQIGLLSPGLFHNNHNLQRLYLSNNHISQLPPSVFMQL 268
Score = 79.3 bits (194), Expect = 6e-15
Identities = 55/195 (28%), Positives = 88/195 (45%)
Frame = +1
Query: 217 SSISCQPPAKFPHYLPADTIYLATEFFNLTQMPADILQGIPNLQELHLSNNQLEDLSAKF 396
+ I P F + +YL+ +++Q+P + +P L L L N L++LS
Sbjct: 231 NQIGLLSPGLFHNNHNLQRLYLSNN--HISQLPPSVFMQLPQLNRLTLFGNSLKELSPGI 288
Query: 397 LLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDL 576
P+P L+ L L N + LP +F L L+L N++ + GL LR L L
Sbjct: 289 FGPMPNLRELWLYDNHISSLPDNVFSNLRQLQVLILSRNQISFISPGAFNGLTELRELSL 348
Query: 577 SGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGF 756
N L+ L + +L + L NN+L+ LP ++ L + L+ N+L+ L G
Sbjct: 349 HTNALQDLDGNVFRMLANLQNISLQNNRLRQLPGNIFANVNGLMAIQLQNNQLENLPLGI 408
Query: 757 LAPQPKLRYLFLNNN 801
KL L L +N
Sbjct: 409 FDHLGKLCELRLYDN 423
Score = 78.2 bits (191), Expect = 1e-14
Identities = 57/213 (26%), Positives = 100/213 (46%)
Frame = +1
Query: 274 IYLATEFFNLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKR 453
I L E L+++ + + +L+ L L+NN+L+ L + L+ L L+ N L +
Sbjct: 80 IALRIEKNELSRITPGAFRNLGSLRYLSLANNKLQVLPIGLFQGLDSLESLLLSSNQLLQ 139
Query: 454 LPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDL 633
+ P F + L L L N L+ + L L L+L N L + ++ + +L
Sbjct: 140 IQPAHFSQCSNLKELQLHGNHLEYIPDGAFDHLVGLTKLNLGKNSLTHISPRVFQHLGNL 199
Query: 634 HILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTT 813
+L L N+L +P G + L+ L L+ N++ +L G L+ L+L+NN ++
Sbjct: 200 QVLRLYENRLTDIPMGTFDGLVNLQELALQQNQIGLLSPGLFHNNHNLQRLYLSNNHISQ 259
Query: 814 LAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASL 912
L F L L+ L L NSL + G++ +
Sbjct: 260 LPPSVFMQLPQLNRLTLFGNSLKELSPGIFGPM 292
Score = 59.7 bits (143), Expect = 5e-09
Identities = 44/141 (31%), Positives = 65/141 (46%)
Frame = +1
Query: 493 TLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTL 672
+L + + L+ S + AL L + N+L + N L L L NN+LQ L
Sbjct: 57 SLQILNTHITELNESPFLNISALIALRIEKNELSRITPGAFRNLGSLRYLSLANNKLQVL 116
Query: 673 PPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLD 852
P L +G LE L L N+L ++ + L+ L L+ N L + GAF L L
Sbjct: 117 PIGLFQGLDSLESLLLSSNQLLQIQPAHFSQCSNLKELQLHGNHLEYIPDGAFDHLVGLT 176
Query: 853 MLDLSNNSLTSVPEGLWASLG 915
L+L NSLT + ++ LG
Sbjct: 177 KLNLGKNSLTHISPRVFQHLG 197
>ref|NP_001128529.2| leucine-rich repeat-containing protein 15 isoform a [Homo sapiens].
Length = 587
Score = 110 bits (274), Expect = 3e-24
Identities = 75/235 (31%), Positives = 105/235 (44%)
Frame = +1
Query: 301 LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVS 480
LT +P G+ NLQEL L NQ+ LS L+ L L+ N + +LPP +F
Sbjct: 215 LTDIPMGTFDGLVNLQELALQQNQIGLLSPGLFHNNHNLQRLYLSNNHISQLPPSVFMQL 274
Query: 481 AALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQ 660
L+ L L N L L + LR L L N + +LP + +N L +L L NQ
Sbjct: 275 PQLNRLTLFGNSLKELSPGIFGPMPNLRELWLYDNHISSLPDNVFSNLRQLQVLILSRNQ 334
Query: 661 LQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGL 840
+ + P G +L L L N LQ L+ L+ + L NN+L L F +
Sbjct: 335 ISFISPGAFNGLTELRELSLHTNALQDLDGNVFRMLANLQNISLQNNRLRQLPGNIFANV 394
Query: 841 QVLDMLDLSNNSLTSVPEGLWASLGKAAGNMKVGFEISGNPWICDQKLNDLYRWL 1005
L + L NN L ++P G++ LGK + NPW CD + L WL
Sbjct: 395 NGLMAIQLQNNQLENLPLGIFDHLGKLC-----ELRLYDNPWRCDSDILPLRNWL 444
Score = 92.8 bits (229), Expect = 6e-19
Identities = 65/191 (34%), Positives = 93/191 (48%)
Frame = +1
Query: 340 NLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRL 519
NL+EL L N LE + + L L+L +N+L + P +F+ L L L ENRL
Sbjct: 156 NLKELQLHGNHLEYIPDGAFDHLVGLTKLNLGKNSLTHISPRVFQHLGNLQVLRLYENRL 215
Query: 520 DILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPL 699
+ GL L+ L L NQ+ L L N +L L L NN + LPP +
Sbjct: 216 TDIPMGTFDGLVNLQELALQQNQIGLLSPGLFHNNHNLQRLYLSNNHISQLPPSVFMQLP 275
Query: 700 KLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSL 879
+L L L GN L+ L G P P LR L+L +N +++L F L+ L +L LS N +
Sbjct: 276 QLNRLTLFGNSLKELSPGIFGPMPNLRELWLYDNHISSLPDNVFSNLRQLQVLILSRNQI 335
Query: 880 TSVPEGLWASL 912
+ + G + L
Sbjct: 336 SFISPGAFNGL 346
Score = 79.3 bits (194), Expect = 6e-15
Identities = 64/237 (27%), Positives = 103/237 (43%), Gaps = 2/237 (0%)
Frame = +1
Query: 208 SNGSSISCQPP--AKFPHYLPADTIYLATEFFNLTQMPADILQGIPNLQELHLSNNQLED 381
S S + C P LP + + L ++T++ I L L + N+L
Sbjct: 38 SRASQVECTGARIVAVPTPLPWNAMSLQILNTHITELNESPFLNISALIALRIEKNELSR 97
Query: 382 LSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKAL 561
++ + L+ L L N L+ LP GLF+ +L +L+L N+L + + L
Sbjct: 98 ITPGAFRNLGSLRYLSLANNKLQVLPIGLFQGLDSLESLLLSSNQLLQIQPAHFSQCSNL 157
Query: 562 RHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQV 741
+ L L GN L +P + L L+LG N L + P + + L+ L L NRL
Sbjct: 158 KELQLHGNHLEYIPDGAFDHLVGLTKLNLGKNSLTHISPRVFQHLGNLQVLRLYENRLTD 217
Query: 742 LEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASL 912
+ G L+ L L N++ L+ G F L L LSNN ++ +P ++ L
Sbjct: 218 IPMGTFDGLVNLQELALQQNQIGLLSPGLFHNNHNLQRLYLSNNHISQLPPSVFMQL 274
Score = 79.3 bits (194), Expect = 6e-15
Identities = 55/195 (28%), Positives = 88/195 (45%)
Frame = +1
Query: 217 SSISCQPPAKFPHYLPADTIYLATEFFNLTQMPADILQGIPNLQELHLSNNQLEDLSAKF 396
+ I P F + +YL+ +++Q+P + +P L L L N L++LS
Sbjct: 237 NQIGLLSPGLFHNNHNLQRLYLSNN--HISQLPPSVFMQLPQLNRLTLFGNSLKELSPGI 294
Query: 397 LLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDL 576
P+P L+ L L N + LP +F L L+L N++ + GL LR L L
Sbjct: 295 FGPMPNLRELWLYDNHISSLPDNVFSNLRQLQVLILSRNQISFISPGAFNGLTELRELSL 354
Query: 577 SGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGF 756
N L+ L + +L + L NN+L+ LP ++ L + L+ N+L+ L G
Sbjct: 355 HTNALQDLDGNVFRMLANLQNISLQNNRLRQLPGNIFANVNGLMAIQLQNNQLENLPLGI 414
Query: 757 LAPQPKLRYLFLNNN 801
KL L L +N
Sbjct: 415 FDHLGKLCELRLYDN 429
Score = 78.2 bits (191), Expect = 1e-14
Identities = 57/213 (26%), Positives = 100/213 (46%)
Frame = +1
Query: 274 IYLATEFFNLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKR 453
I L E L+++ + + +L+ L L+NN+L+ L + L+ L L+ N L +
Sbjct: 86 IALRIEKNELSRITPGAFRNLGSLRYLSLANNKLQVLPIGLFQGLDSLESLLLSSNQLLQ 145
Query: 454 LPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDL 633
+ P F + L L L N L+ + L L L+L N L + ++ + +L
Sbjct: 146 IQPAHFSQCSNLKELQLHGNHLEYIPDGAFDHLVGLTKLNLGKNSLTHISPRVFQHLGNL 205
Query: 634 HILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTT 813
+L L N+L +P G + L+ L L+ N++ +L G L+ L+L+NN ++
Sbjct: 206 QVLRLYENRLTDIPMGTFDGLVNLQELALQQNQIGLLSPGLFHNNHNLQRLYLSNNHISQ 265
Query: 814 LAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASL 912
L F L L+ L L NSL + G++ +
Sbjct: 266 LPPSVFMQLPQLNRLTLFGNSLKELSPGIFGPM 298
Score = 59.7 bits (143), Expect = 5e-09
Identities = 44/141 (31%), Positives = 65/141 (46%)
Frame = +1
Query: 493 TLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTL 672
+L + + L+ S + AL L + N+L + N L L L NN+LQ L
Sbjct: 63 SLQILNTHITELNESPFLNISALIALRIEKNELSRITPGAFRNLGSLRYLSLANNKLQVL 122
Query: 673 PPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLD 852
P L +G LE L L N+L ++ + L+ L L+ N L + GAF L L
Sbjct: 123 PIGLFQGLDSLESLLLSSNQLLQIQPAHFSQCSNLKELQLHGNHLEYIPDGAFDHLVGLT 182
Query: 853 MLDLSNNSLTSVPEGLWASLG 915
L+L NSLT + ++ LG
Sbjct: 183 KLNLGKNSLTHISPRVFQHLG 203
>ref|NP_001139478.1| insulin-like growth factor-binding protein complex acid labile
subunit isoform 1 precursor [Homo sapiens].
Length = 643
Score = 108 bits (271), Expect = 8e-24
Identities = 79/248 (31%), Positives = 116/248 (46%), Gaps = 4/248 (1%)
Frame = +1
Query: 181 PNACLVFHSSNGSSISC----QPPAKFPHYLPADTIYLATEFFNLTQMPADILQGIPNLQ 348
P AC+ + + +S + + P +P T L + NL+ +P Q + +L
Sbjct: 80 PAACVCSYDDDADELSVFCSSRNLTRLPDGVPGGTQALWLDGNNLSSVPPAAFQNLSSLG 139
Query: 349 ELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLDIL 528
L+L QL L + LL + L L L RN L+ L G F + AL +L L NRL L
Sbjct: 140 FLNLQGGQLGSLEPQALLGLENLCHLHLERNQLRSLALGTFAHTPALASLGLSNNRLSRL 199
Query: 529 DASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLE 708
+ GL +L L+L N L LP L L L N+L L P L G +L
Sbjct: 200 EDGLFEGLGSLWDLNLGWNSLAVLPDAAFRGLGSLRELVLAGNRLAYLQPALFSGLAELR 259
Query: 709 WLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSV 888
L L N L+ ++ P+L+ L+L+ N + +A GAF GL+ L LDLS+N + +
Sbjct: 260 ELDLSRNALRAIKANVFVQLPRLQKLYLDRNLIAAVAPGAFLGLKALRWLDLSHNRVAGL 319
Query: 889 PEGLWASL 912
E + L
Sbjct: 320 LEDTFPGL 327
Score = 105 bits (261), Expect = 1e-22
Identities = 74/226 (32%), Positives = 115/226 (50%)
Frame = +1
Query: 211 NGSSISCQPPAKFPHYLPADTIYLATEFFNLTQMPADILQGIPNLQELHLSNNQLEDLSA 390
+G+++S PPA F + + +L + L + L G+ NL LHL NQL L+
Sbjct: 120 DGNNLSSVPPAAFQNL--SSLGFLNLQGGQLGSLEPQALLGLENLCHLHLERNQLRSLAL 177
Query: 391 KFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHL 570
P L L L+ N L RL GLF+ +L L L N L +L + RGL +LR L
Sbjct: 178 GTFAHTPALASLGLSNNRLSRLEDGLFEGLGSLWDLNLGWNSLAVLPDAAFRGLGSLREL 237
Query: 571 DLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEE 750
L+GN+L L L + +L LDL N L+ + ++ +L+ L+L+ N + +
Sbjct: 238 VLAGNRLAYLQPALFSGLAELRELDLSRNALRAIKANVFVQLPRLQKLYLDRNLIAAVAP 297
Query: 751 GFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSV 888
G LR+L L++N++ L F GL L +L LS+N++ S+
Sbjct: 298 GAFLGLKALRWLDLSHNRVAGLLEDTFPGLLGLRVLRLSHNAIASL 343
Score = 102 bits (254), Expect = 7e-22
Identities = 69/207 (33%), Positives = 108/207 (52%)
Frame = +1
Query: 298 NLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKV 477
+L +P +G+ +L+EL L+ N+L L + +L+ LDL+RNAL+ + +F
Sbjct: 219 SLAVLPDAAFRGLGSLRELVLAGNRLAYLQPALFSGLAELRELDLSRNALRAIKANVFVQ 278
Query: 478 SAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNN 657
L L L N + + GLKALR LDLS N++ L L +L L +N
Sbjct: 279 LPRLQKLYLDRNLIAAVAPGAFLGLKALRWLDLSHNRVAGLLEDTFPGLLGLRVLRLSHN 338
Query: 658 QLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRG 837
+ +L P + LE L L NR++ L E +L L L++N+L + AGAF G
Sbjct: 339 AIASLRPRTFKDLHFLEELQLGHNRIRQLAERSFEGLGQLEVLTLDHNQLQEVKAGAFLG 398
Query: 838 LQVLDMLDLSNNSLTSVPEGLWASLGK 918
L + +++LS N L ++PE ++ LGK
Sbjct: 399 LTNVAVMNLSGNCLRNLPEQVFRGLGK 425
Score = 97.1 bits (240), Expect = 3e-20
Identities = 77/237 (32%), Positives = 111/237 (46%), Gaps = 6/237 (2%)
Frame = +1
Query: 301 LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVS 480
+ Q+ +G+ L+ L L +NQL+++ A L + + V++L+ N L+ LP +F+
Sbjct: 364 IRQLAERSFEGLGQLEVLTLDHNQLQEVKAGAFLGLTNVAVMNLSGNCLRNLPEQVFRGL 423
Query: 481 AALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQ 660
LH+L L+ + L + GL LR L L N L + + L +L LDL +NQ
Sbjct: 424 GKLHSLHLEGSCLGRIRPHTFTGLSGLRRLFLKDNGLVGIEEQSLWGLAELLELDLTSNQ 483
Query: 661 LQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGL 840
L LP L +G KLE+L L NRL L L P + +L +++N+L L L
Sbjct: 484 LTHLPHRLFQGLGKLEYLLLSRNRLAELPADALGPLQRAFWLDVSHNRLEALPNSLLAPL 543
Query: 841 QVLDMLDLSNNSL---TSVPEG---LWASLGKAAGNMKVGFEISGNPWICDQKLNDL 993
L L L NNSL T P G LW + GNPW C L L
Sbjct: 544 GRLRYLSLRNNSLRTFTPQPPGLERLW---------------LEGNPWDCGCPLKAL 585
Score = 95.1 bits (235), Expect = 1e-19
Identities = 66/179 (36%), Positives = 90/179 (50%), Gaps = 1/179 (0%)
Frame = +1
Query: 280 LATEFFNLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLP 459
L + L ++ A G+ N+ ++LS N L +L + + +L L L + L R+
Sbjct: 381 LTLDHNQLQEVKAGAFLGLTNVAVMNLSGNCLRNLPEQVFRGLGKLHSLHLEGSCLGRIR 440
Query: 460 PGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHI 639
P F + L L LK+N L ++ L GL L LDL+ NQL LP +L L
Sbjct: 441 PHTFTGLSGLRRLFLKDNGLVGIEEQSLWGLAELLELDLTSNQLTHLPHRLFQGLGKLEY 500
Query: 640 LDLGNNQLQTLPPDLLRGPLKLE-WLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTT 813
L L N+L LP D L GPL+ WL + NRL+ L LAP +LRYL L NN L T
Sbjct: 501 LLLSRNRLAELPADAL-GPLQRAFWLDVSHNRLEALPNSLLAPLGRLRYLSLRNNSLRT 558
Score = 91.7 bits (226), Expect = 1e-18
Identities = 68/196 (34%), Positives = 96/196 (48%)
Frame = +1
Query: 331 GIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKE 510
G+ L+ L LS+N++ L + L+VL L+ NA+ L P FK L L L
Sbjct: 302 GLKALRWLDLSHNRVAGLLEDTFPGLLGLRVLRLSHNAIASLRPRTFKDLHFLEELQLGH 361
Query: 511 NRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLR 690
NR+ L GL L L L NQL+ + T++ +++L N L+ LP + R
Sbjct: 362 NRIRQLAERSFEGLGQLEVLTLDHNQLQEVKAGAFLGLTNVAVMNLSGNCLRNLPEQVFR 421
Query: 691 GPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSN 870
G KL LHLEG+ L + LR LFL +N L + + GL L LDL++
Sbjct: 422 GLGKLHSLHLEGSCLGRIRPHTFTGLSGLRRLFLKDNGLVGIEEQSLWGLAELLELDLTS 481
Query: 871 NSLTSVPEGLWASLGK 918
N LT +P L+ LGK
Sbjct: 482 NQLTHLPHRLFQGLGK 497
Score = 81.6 bits (200), Expect = 1e-15
Identities = 64/201 (31%), Positives = 93/201 (46%)
Frame = +1
Query: 319 DILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTL 498
D G+ L+ L LS+N + L + + L+ L L N +++L F+ L L
Sbjct: 322 DTFPGLLGLRVLRLSHNAIASLRPRTFKDLHFLEELQLGHNRIRQLAERSFEGLGQLEVL 381
Query: 499 VLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPP 678
L N+L + A GL + ++LSGN LR LP ++ LH L L + L + P
Sbjct: 382 TLDHNQLQEVKAGAFLGLTNVAVMNLSGNCLRNLPEQVFRGLGKLHSLHLEGSCLGRIRP 441
Query: 679 DLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDML 858
G L L L+ N L +EE L +L L L +N+LT L F+GL L+ L
Sbjct: 442 HTFTGLSGLRRLFLKDNGLVGIEEQSLWGLAELLELDLTSNQLTHLPHRLFQGLGKLEYL 501
Query: 859 DLSNNSLTSVPEGLWASLGKA 921
LS N L +P L +A
Sbjct: 502 LLSRNRLAELPADALGPLQRA 522
Score = 70.9 bits (172), Expect = 2e-12
Identities = 46/114 (40%), Positives = 60/114 (52%)
Frame = +1
Query: 574 LSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEG 753
L GN L ++P N + L L+L QL +L P L G L LHLE N+L+ L G
Sbjct: 119 LDGNNLSSVPPAAFQNLSSLGFLNLQGGQLGSLEPQALLGLENLCHLHLERNQLRSLALG 178
Query: 754 FLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASLG 915
A P L L L+NN+L+ L G F GL L L+L NSL +P+ + LG
Sbjct: 179 TFAHTPALASLGLSNNRLSRLEDGLFEGLGSLWDLNLGWNSLAVLPDAAFRGLG 232
Score = 62.4 bits (150), Expect = 8e-10
Identities = 57/169 (33%), Positives = 75/169 (44%)
Frame = +1
Query: 412 QLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQL 591
+L V +RN L RLP G V L L N L + + + L +L L+L G QL
Sbjct: 93 ELSVFCSSRN-LTRLPDG---VPGGTQALWLDGNNLSSVPPAAFQNLSSLGFLNLQGGQL 148
Query: 592 RTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQP 771
+L + L +L L L NQL++L L L L NRL LE+G
Sbjct: 149 GSLEPQALLGLENLCHLHLERNQLRSLALGTFAHTPALASLGLSNNRLSRLEDGLFEGLG 208
Query: 772 KLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASLGK 918
L L L N L L AFRGL L L L+ N L + L++ L +
Sbjct: 209 SLWDLNLGWNSLAVLPDAAFRGLGSLRELVLAGNRLAYLQPALFSGLAE 257
>ref|NP_004961.1| insulin-like growth factor-binding protein complex acid labile
subunit isoform 2 precursor [Homo sapiens].
Length = 605
Score = 108 bits (271), Expect = 8e-24
Identities = 79/248 (31%), Positives = 116/248 (46%), Gaps = 4/248 (1%)
Frame = +1
Query: 181 PNACLVFHSSNGSSISC----QPPAKFPHYLPADTIYLATEFFNLTQMPADILQGIPNLQ 348
P AC+ + + +S + + P +P T L + NL+ +P Q + +L
Sbjct: 42 PAACVCSYDDDADELSVFCSSRNLTRLPDGVPGGTQALWLDGNNLSSVPPAAFQNLSSLG 101
Query: 349 ELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLDIL 528
L+L QL L + LL + L L L RN L+ L G F + AL +L L NRL L
Sbjct: 102 FLNLQGGQLGSLEPQALLGLENLCHLHLERNQLRSLALGTFAHTPALASLGLSNNRLSRL 161
Query: 529 DASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLE 708
+ GL +L L+L N L LP L L L N+L L P L G +L
Sbjct: 162 EDGLFEGLGSLWDLNLGWNSLAVLPDAAFRGLGSLRELVLAGNRLAYLQPALFSGLAELR 221
Query: 709 WLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSV 888
L L N L+ ++ P+L+ L+L+ N + +A GAF GL+ L LDLS+N + +
Sbjct: 222 ELDLSRNALRAIKANVFVQLPRLQKLYLDRNLIAAVAPGAFLGLKALRWLDLSHNRVAGL 281
Query: 889 PEGLWASL 912
E + L
Sbjct: 282 LEDTFPGL 289
Score = 105 bits (261), Expect = 1e-22
Identities = 74/226 (32%), Positives = 115/226 (50%)
Frame = +1
Query: 211 NGSSISCQPPAKFPHYLPADTIYLATEFFNLTQMPADILQGIPNLQELHLSNNQLEDLSA 390
+G+++S PPA F + + +L + L + L G+ NL LHL NQL L+
Sbjct: 82 DGNNLSSVPPAAFQNL--SSLGFLNLQGGQLGSLEPQALLGLENLCHLHLERNQLRSLAL 139
Query: 391 KFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHL 570
P L L L+ N L RL GLF+ +L L L N L +L + RGL +LR L
Sbjct: 140 GTFAHTPALASLGLSNNRLSRLEDGLFEGLGSLWDLNLGWNSLAVLPDAAFRGLGSLREL 199
Query: 571 DLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEE 750
L+GN+L L L + +L LDL N L+ + ++ +L+ L+L+ N + +
Sbjct: 200 VLAGNRLAYLQPALFSGLAELRELDLSRNALRAIKANVFVQLPRLQKLYLDRNLIAAVAP 259
Query: 751 GFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSV 888
G LR+L L++N++ L F GL L +L LS+N++ S+
Sbjct: 260 GAFLGLKALRWLDLSHNRVAGLLEDTFPGLLGLRVLRLSHNAIASL 305
Score = 102 bits (254), Expect = 7e-22
Identities = 69/207 (33%), Positives = 108/207 (52%)
Frame = +1
Query: 298 NLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKV 477
+L +P +G+ +L+EL L+ N+L L + +L+ LDL+RNAL+ + +F
Sbjct: 181 SLAVLPDAAFRGLGSLRELVLAGNRLAYLQPALFSGLAELRELDLSRNALRAIKANVFVQ 240
Query: 478 SAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNN 657
L L L N + + GLKALR LDLS N++ L L +L L +N
Sbjct: 241 LPRLQKLYLDRNLIAAVAPGAFLGLKALRWLDLSHNRVAGLLEDTFPGLLGLRVLRLSHN 300
Query: 658 QLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRG 837
+ +L P + LE L L NR++ L E +L L L++N+L + AGAF G
Sbjct: 301 AIASLRPRTFKDLHFLEELQLGHNRIRQLAERSFEGLGQLEVLTLDHNQLQEVKAGAFLG 360
Query: 838 LQVLDMLDLSNNSLTSVPEGLWASLGK 918
L + +++LS N L ++PE ++ LGK
Sbjct: 361 LTNVAVMNLSGNCLRNLPEQVFRGLGK 387
Score = 97.1 bits (240), Expect = 3e-20
Identities = 77/237 (32%), Positives = 111/237 (46%), Gaps = 6/237 (2%)
Frame = +1
Query: 301 LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVS 480
+ Q+ +G+ L+ L L +NQL+++ A L + + V++L+ N L+ LP +F+
Sbjct: 326 IRQLAERSFEGLGQLEVLTLDHNQLQEVKAGAFLGLTNVAVMNLSGNCLRNLPEQVFRGL 385
Query: 481 AALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQ 660
LH+L L+ + L + GL LR L L N L + + L +L LDL +NQ
Sbjct: 386 GKLHSLHLEGSCLGRIRPHTFTGLSGLRRLFLKDNGLVGIEEQSLWGLAELLELDLTSNQ 445
Query: 661 LQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGL 840
L LP L +G KLE+L L NRL L L P + +L +++N+L L L
Sbjct: 446 LTHLPHRLFQGLGKLEYLLLSRNRLAELPADALGPLQRAFWLDVSHNRLEALPNSLLAPL 505
Query: 841 QVLDMLDLSNNSL---TSVPEG---LWASLGKAAGNMKVGFEISGNPWICDQKLNDL 993
L L L NNSL T P G LW + GNPW C L L
Sbjct: 506 GRLRYLSLRNNSLRTFTPQPPGLERLW---------------LEGNPWDCGCPLKAL 547
Score = 95.1 bits (235), Expect = 1e-19
Identities = 66/179 (36%), Positives = 90/179 (50%), Gaps = 1/179 (0%)
Frame = +1
Query: 280 LATEFFNLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLP 459
L + L ++ A G+ N+ ++LS N L +L + + +L L L + L R+
Sbjct: 343 LTLDHNQLQEVKAGAFLGLTNVAVMNLSGNCLRNLPEQVFRGLGKLHSLHLEGSCLGRIR 402
Query: 460 PGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHI 639
P F + L L LK+N L ++ L GL L LDL+ NQL LP +L L
Sbjct: 403 PHTFTGLSGLRRLFLKDNGLVGIEEQSLWGLAELLELDLTSNQLTHLPHRLFQGLGKLEY 462
Query: 640 LDLGNNQLQTLPPDLLRGPLKLE-WLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTT 813
L L N+L LP D L GPL+ WL + NRL+ L LAP +LRYL L NN L T
Sbjct: 463 LLLSRNRLAELPADAL-GPLQRAFWLDVSHNRLEALPNSLLAPLGRLRYLSLRNNSLRT 520
Score = 91.7 bits (226), Expect = 1e-18
Identities = 68/196 (34%), Positives = 96/196 (48%)
Frame = +1
Query: 331 GIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKE 510
G+ L+ L LS+N++ L + L+VL L+ NA+ L P FK L L L
Sbjct: 264 GLKALRWLDLSHNRVAGLLEDTFPGLLGLRVLRLSHNAIASLRPRTFKDLHFLEELQLGH 323
Query: 511 NRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLR 690
NR+ L GL L L L NQL+ + T++ +++L N L+ LP + R
Sbjct: 324 NRIRQLAERSFEGLGQLEVLTLDHNQLQEVKAGAFLGLTNVAVMNLSGNCLRNLPEQVFR 383
Query: 691 GPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSN 870
G KL LHLEG+ L + LR LFL +N L + + GL L LDL++
Sbjct: 384 GLGKLHSLHLEGSCLGRIRPHTFTGLSGLRRLFLKDNGLVGIEEQSLWGLAELLELDLTS 443
Query: 871 NSLTSVPEGLWASLGK 918
N LT +P L+ LGK
Sbjct: 444 NQLTHLPHRLFQGLGK 459
Score = 81.6 bits (200), Expect = 1e-15
Identities = 64/201 (31%), Positives = 93/201 (46%)
Frame = +1
Query: 319 DILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTL 498
D G+ L+ L LS+N + L + + L+ L L N +++L F+ L L
Sbjct: 284 DTFPGLLGLRVLRLSHNAIASLRPRTFKDLHFLEELQLGHNRIRQLAERSFEGLGQLEVL 343
Query: 499 VLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPP 678
L N+L + A GL + ++LSGN LR LP ++ LH L L + L + P
Sbjct: 344 TLDHNQLQEVKAGAFLGLTNVAVMNLSGNCLRNLPEQVFRGLGKLHSLHLEGSCLGRIRP 403
Query: 679 DLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDML 858
G L L L+ N L +EE L +L L L +N+LT L F+GL L+ L
Sbjct: 404 HTFTGLSGLRRLFLKDNGLVGIEEQSLWGLAELLELDLTSNQLTHLPHRLFQGLGKLEYL 463
Query: 859 DLSNNSLTSVPEGLWASLGKA 921
LS N L +P L +A
Sbjct: 464 LLSRNRLAELPADALGPLQRA 484
Score = 70.9 bits (172), Expect = 2e-12
Identities = 46/114 (40%), Positives = 60/114 (52%)
Frame = +1
Query: 574 LSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEG 753
L GN L ++P N + L L+L QL +L P L G L LHLE N+L+ L G
Sbjct: 81 LDGNNLSSVPPAAFQNLSSLGFLNLQGGQLGSLEPQALLGLENLCHLHLERNQLRSLALG 140
Query: 754 FLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASLG 915
A P L L L+NN+L+ L G F GL L L+L NSL +P+ + LG
Sbjct: 141 TFAHTPALASLGLSNNRLSRLEDGLFEGLGSLWDLNLGWNSLAVLPDAAFRGLG 194
Score = 62.4 bits (150), Expect = 8e-10
Identities = 57/169 (33%), Positives = 75/169 (44%)
Frame = +1
Query: 412 QLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQL 591
+L V +RN L RLP G V L L N L + + + L +L L+L G QL
Sbjct: 55 ELSVFCSSRN-LTRLPDG---VPGGTQALWLDGNNLSSVPPAAFQNLSSLGFLNLQGGQL 110
Query: 592 RTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQP 771
+L + L +L L L NQL++L L L L NRL LE+G
Sbjct: 111 GSLEPQALLGLENLCHLHLERNQLRSLALGTFAHTPALASLGLSNNRLSRLEDGLFEGLG 170
Query: 772 KLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASLGK 918
L L L N L L AFRGL L L L+ N L + L++ L +
Sbjct: 171 SLWDLNLGWNSLAVLPDAAFRGLGSLRELVLAGNRLAYLQPALFSGLAE 219
>ref|NP_004479.1| platelet glycoprotein V precursor [Homo sapiens].
Length = 560
Score = 102 bits (254), Expect = 7e-22
Identities = 80/225 (35%), Positives = 107/225 (47%), Gaps = 25/225 (11%)
Frame = +1
Query: 319 DILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTL 498
++ Q + NLQEL L+ NQL+ L A + LK+LDL+ N L LP GL A L L
Sbjct: 140 NMFQKLVNLQELALNQNQLDFLPASLFTNLENLKLLDLSGNNLTHLPKGLLGAQAKLERL 199
Query: 499 VLKENRLDILDASWLRGLKALRHLD------------------------LSGNQLRTLPR 606
+L NRL LD+ L L AL L LS N L LP
Sbjct: 200 LLHSNRLVSLDSGLLNSLGALTELQFHRNHIRSIAPGAFDRLPNLSSLTLSRNHLAFLPS 259
Query: 607 KLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYL 786
L + +L +L L N L LP L L+ L L +L+ L +LRYL
Sbjct: 260 ALFLHSHNLTLLTLFENPLAELPGVLFGEMGGLQELWLNRTQLRTLPAAAFRNLSRLRYL 319
Query: 787 FLN-NNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASLGK 918
+ + +L+ L GAF+GL L +L L +N LT++P+GL LGK
Sbjct: 320 GVTLSPRLSALPQGAFQGLGELQVLALHSNGLTALPDGLLRGLGK 364
Score = 98.6 bits (244), Expect = 1e-20
Identities = 68/191 (35%), Positives = 93/191 (48%)
Frame = +1
Query: 331 GIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKE 510
G+ LQ L +S++ + ++ + +LK L L+RN + LP L L L L
Sbjct: 72 GMTVLQRLMISDSHISAVAPGTFSDLIKLKTLRLSRNKITHLPGALLDKMVLLEQLFLDH 131
Query: 511 NRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLR 690
N L +D + + L L+ L L+ NQL LP L N +L +LDL N L LP LL
Sbjct: 132 NALRGIDQNMFQKLVNLQELALNQNQLDFLPASLFTNLENLKLLDLSGNNLTHLPKGLLG 191
Query: 691 GPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSN 870
KLE L L NRL L+ G L L L + N + ++A GAF L L L LS
Sbjct: 192 AQAKLERLLLHSNRLVSLDSGLLNSLGALTELQFHRNHIRSIAPGAFDRLPNLSSLTLSR 251
Query: 871 NSLTSVPEGLW 903
N L +P L+
Sbjct: 252 NHLAFLPSALF 262
Score = 94.0 bits (232), Expect = 3e-19
Identities = 72/236 (30%), Positives = 105/236 (44%), Gaps = 1/236 (0%)
Frame = +1
Query: 301 LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVS 480
L + + +L + L EL N + ++ +P L L L+RN L LP LF S
Sbjct: 206 LVSLDSGLLNSLGALTELQFHRNHIRSIAPGAFDRLPNLSSLTLSRNHLAFLPSALFLHS 265
Query: 481 AALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLG-NN 657
L L L EN L L + L+ L L+ QLRTLP N + L L + +
Sbjct: 266 HNLTLLTLFENPLAELPGVLFGEMGGLQELWLNRTQLRTLPAAAFRNLSRLRYLGVTLSP 325
Query: 658 QLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRG 837
+L LP +G +L+ L L N L L +G L KLR + L N+L L FR
Sbjct: 326 RLSALPQGAFQGLGELQVLALHSNGLTALPDGLLRGLGKLRQVSLRRNRLRALPRALFRN 385
Query: 838 LQVLDMLDLSNNSLTSVPEGLWASLGKAAGNMKVGFEISGNPWICDQKLNDLYRWL 1005
L L+ + L +N L ++P ++ +L + + + N W CD L WL
Sbjct: 386 LSSLESVQLDHNQLETLPGDVFGALPRLTEVL-----LGHNSWRCDCGLGPFLGWL 436
Score = 86.3 bits (212), Expect = 5e-17
Identities = 64/191 (33%), Positives = 90/191 (47%)
Frame = +1
Query: 343 LQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLD 522
L+ L LS N++ L L + L+ L L NAL+ + +F+ L L L +N+LD
Sbjct: 100 LKTLRLSRNKITHLPGALLDKMVLLEQLFLDHNALRGIDQNMFQKLVNLQELALNQNQLD 159
Query: 523 ILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLK 702
L AS L+ L+ LDLSGN L LP+ LL L L L +N+L +L LL
Sbjct: 160 FLPASLFTNLENLKLLDLSGNNLTHLPKGLLGAQAKLERLLLHSNRLVSLDSGLLNSLGA 219
Query: 703 LEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLT 882
L L N ++ + G P L L L+ N L L + F L +L L N L
Sbjct: 220 LTELQFHRNHIRSIAPGAFDRLPNLSSLTLSRNHLAFLPSALFLHSHNLTLLTLFENPLA 279
Query: 883 SVPEGLWASLG 915
+P L+ +G
Sbjct: 280 ELPGVLFGEMG 290
Score = 79.3 bits (194), Expect = 6e-15
Identities = 54/145 (37%), Positives = 75/145 (51%), Gaps = 2/145 (1%)
Frame = +1
Query: 256 YLPADTIYLATEFFN-LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDL 432
+L + + L T F N L ++P + + LQEL L+ QL L A + +L+ L +
Sbjct: 262 FLHSHNLTLLTLFENPLAELPGVLFGEMGGLQELWLNRTQLRTLPAAAFRNLSRLRYLGV 321
Query: 433 TRNA-LKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRK 609
T + L LP G F+ L L L N L L LRGL LR + L N+LR LPR
Sbjct: 322 TLSPRLSALPQGAFQGLGELQVLALHSNGLTALPDGLLRGLGKLRQVSLRRNRLRALPRA 381
Query: 610 LLANFTDLHILDLGNNQLQTLPPDL 684
L N + L + L +NQL+TLP D+
Sbjct: 382 LFRNLSSLESVQLDHNQLETLPGDV 406
Score = 76.3 bits (186), Expect = 5e-14
Identities = 52/166 (31%), Positives = 76/166 (45%)
Frame = +1
Query: 415 LKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLR 594
L+ L ++ + + + PG F L TL L N++ L + L + L L L N LR
Sbjct: 76 LQRLMISDSHISAVAPGTFSDLIKLKTLRLSRNKITHLPGALLDKMVLLEQLFLDHNALR 135
Query: 595 TLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPK 774
+ + + +L L L NQL LP L L+ L L GN L L +G L Q K
Sbjct: 136 GIDQNMFQKLVNLQELALNQNQLDFLPASLFTNLENLKLLDLSGNNLTHLPKGLLGAQAK 195
Query: 775 LRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASL 912
L L L++N+L +L +G L L L N + S+ G + L
Sbjct: 196 LERLLLHSNRLVSLDSGLLNSLGALTELQFHRNHIRSIAPGAFDRL 241
Score = 65.9 bits (159), Expect = 7e-11
Identities = 49/164 (29%), Positives = 78/164 (47%)
Frame = +1
Query: 427 DLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPR 606
D+ R + LP L H L+ R +L + G+ L+ L +S + + +
Sbjct: 39 DVARISALGLPTNL------THILLFGMGR-GVLQSQSFSGMTVLQRLMISDSHISAVAP 91
Query: 607 KLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYL 786
++ L L L N++ LP LL + LE L L+ N L+ +++ L+ L
Sbjct: 92 GTFSDLIKLKTLRLSRNKITHLPGALLDKMVLLEQLFLDHNALRGIDQNMFQKLVNLQEL 151
Query: 787 FLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASLGK 918
LN N+L L A F L+ L +LDLS N+LT +P+GL + K
Sbjct: 152 ALNQNQLDFLPASLFTNLENLKLLDLSGNNLTHLPKGLLGAQAK 195
>ref|NP_079269.4| leucine-rich repeat transmembrane neuronal protein 4 isoform b [Homo
sapiens].
Length = 518
Score = 100 bits (248), Expect = 4e-21
Identities = 83/298 (27%), Positives = 130/298 (43%), Gaps = 27/298 (9%)
Frame = +1
Query: 274 IYLATEFFNLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKR 453
I+L + ++ + D QGI L+EL LS+N++ L K PVP L+ LDL+ N L+
Sbjct: 88 IWLYLDHNYISSVDEDAFQGIRRLKELILSSNKITYLHNKTFHPVPNLRNLDLSYNKLQT 147
Query: 454 LPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDL 633
L FK GL+ L L L N L+T+P ++ + +L
Sbjct: 148 LQSEQFK------------------------GLRKLIILHLRSNSLKTVPIRVFQDCRNL 183
Query: 634 HILDLGNNQLQTLPPDLLRGPLKLEWLHLE------------------------GNRLQV 741
LDLG N+L++L + G LKL+ LHLE NR++
Sbjct: 184 DFLDLGYNRLRSLSRNAFAGLLKLKELHLEHNQFSKINFAHFPRLFNLRSIYLQWNRIRS 243
Query: 742 LEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPE---GLWASL 912
+ +G L L L+ N + + G F+ L L L+L +N LT++ + W SL
Sbjct: 244 ISQGLTWTWSSLHNLDLSGNDIQGIEPGTFKCLPNLQKLNLDSNKLTNISQETVNAWISL 303
Query: 913 GKAAGNMKVGFEISGNPWICDQKLNDLYRWLCGQRKTRCFFQNNTSLCWPQKALGGAK 1086
+ +SGN W C + + L+ WL + + +T +C K + G K
Sbjct: 304 --------ISITLSGNMWECSRSICPLFYWLKNFKGNK----ESTMICAGPKHIQGEK 349
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 49,983,528
Number of extensions: 1481342
Number of successful extensions: 9659
Number of sequences better than 1.0e-05: 203
Number of HSP's gapped: 8151
Number of HSP's successfully gapped: 628
Length of query: 402
Length of database: 18,297,164
Length adjustment: 105
Effective length of query: 297
Effective length of database: 14,835,944
Effective search space: 4406275368
Effective search space used: 4406275368
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-001980
(1207 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_084072.1| leucine-rich alpha-2-glycoprotein [Mus musculus]. 343 2e-94
Alignment gi|NP_082180.2| carboxypeptidase N subunit 2 [Mus musculus]. 114 2e-25
Alignment gi|NP_032174.2| platelet glycoprotein V precursor [Mus musculus]. 110 3e-24
Alignment gi|NP_083249.1| leucine-rich repeat-containing protein 15 precu... 109 5e-24
Alignment gi|NP_032366.2| insulin-like growth factor-binding protein comp... 108 8e-24
Alignment gi|NP_848846.3| leucine-rich repeat transmembrane neuronal prot... 100 2e-21
Alignment gi|NP_001157792.1| chondroadherin-like [Mus musculus]. 100 2e-21
Alignment gi|NP_766259.2| leucine-rich repeat-containing G-protein couple... 100 3e-21
Alignment gi|NP_848793.1| leucine-rich repeat transmembrane neuronal prot... 99 7e-21
Alignment gi|NP_954693.1| reticulon-4 receptor-like 2 precursor [Mus musc... 99 9e-21
>ref|NP_084072.1| leucine-rich alpha-2-glycoprotein [Mus musculus].
Length = 342
Score = 343 bits (880), Expect = 2e-94
Identities = 175/296 (59%), Positives = 218/296 (73%)
Frame = +1
Query: 190 CLVFHSSNGSSISCQPPAKFPHYLPADTIYLATEFFNLTQMPADILQGIPNLQELHLSNN 369
CL+ S+ GS++SC P +FP LPADT++L+ EF NLTQ+PA LQG P L+ELHLS+N
Sbjct: 36 CLILQSAEGSTVSCHGPTEFPSSLPADTVHLSVEFSNLTQLPAAALQGCPGLRELHLSSN 95
Query: 370 QLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRG 549
+L+ LS + L PVP+L+ LDLTRNAL+ LPPGLF SA L TLVL+EN+L + A WL+G
Sbjct: 96 RLQALSPELLAPVPRLRALDLTRNALRSLPPGLFSTSANLSTLVLRENQLREVSAQWLQG 155
Query: 550 LKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGN 729
L AL HLDL+ NQL +LP LLA+ LH LDLG N L++LP LLRGP +L+ LHLEGN
Sbjct: 156 LDALGHLDLAENQLSSLPSGLLASLGALHTLDLGYNLLESLPEGLLRGPRRLQRLHLEGN 215
Query: 730 RLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWAS 909
RLQ LE+ LAPQP LR LFLN+N+L +A G+F+GLQ LDMLDLSNNSL+S P GLWA
Sbjct: 216 RLQRLEDSLLAPQPFLRVLFLNDNQLVGVATGSFQGLQHLDMLDLSNNSLSSTPPGLWAF 275
Query: 910 LGKAAGNMKVGFEISGNPWICDQKLNDLYRWLCGQRKTRCFFQNNTSLCWPQKALG 1077
LG+ +M+ GF+IS NPWICD+ L DL RWL R + F QN+T P+ G
Sbjct: 276 LGRPTRDMQDGFDISHNPWICDKNLADLCRWLVANR-NKMFSQNDTRCAGPEAMKG 330
>ref|NP_082180.2| carboxypeptidase N subunit 2 [Mus musculus].
Length = 547
Score = 114 bits (285), Expect = 2e-25
Identities = 90/264 (34%), Positives = 118/264 (44%)
Frame = +1
Query: 214 GSSISCQPPAKFPHYLPADTIYLATEFFNLTQMPADILQGIPNLQELHLSNNQLEDLSAK 393
G+ + P F T+ LA LTQ+P Q + LQ L LSNN L L
Sbjct: 154 GNQLRTLPGRLFQSLRDLRTLNLAQNL--LTQLPKGAFQSLTGLQMLKLSNNMLARLPEG 211
Query: 394 FLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLD 573
L + L+ L L NA+ L P LF +L L L+ N + L S L L L
Sbjct: 212 ALGSLSSLQELFLDGNAITELSPHLFSQLFSLEMLWLQHNAICHLPVSLFSSLHNLTFLS 271
Query: 574 LSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEG 753
L N LRTLP L A+ L L L NQL+T+P +L L L N + L E
Sbjct: 272 LKDNALRTLPEGLFAHNQGLLHLSLSYNQLETIPEGAFTNLSRLVSLTLSHNAITDLPEH 331
Query: 754 FLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASLGKAAGNM 933
+L L L++N LT L F L L +L+LS N LT++P G++ +
Sbjct: 332 VFRNLEQLVKLSLDSNNLTALHPALFHNLSRLQLLNLSRNQLTTLPGGIFDT-----NYD 386
Query: 934 KVGFEISGNPWICDQKLNDLYRWL 1005
+ GNPW CD L+ L WL
Sbjct: 387 LFNLALLGNPWQCDCHLSYLTSWL 410
Score = 107 bits (266), Expect = 2e-23
Identities = 71/211 (33%), Positives = 104/211 (49%)
Frame = +1
Query: 280 LATEFFNLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLP 459
L +F L +P D+ + L+ L L NQL L + + L+ L+L +N L +LP
Sbjct: 126 LTLDFDRLAGLPEDLFCHMDILESLQLQGNQLRTLPGRLFQSLRDLRTLNLAQNLLTQLP 185
Query: 460 PGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHI 639
G F+ L L L N L L L L +L+ L L GN + L L + L +
Sbjct: 186 KGAFQSLTGLQMLKLSNNMLARLPEGALGSLSSLQELFLDGNAITELSPHLFSQLFSLEM 245
Query: 640 LDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLA 819
L L +N + LP L L +L L+ N L+ L EG A L +L L+ N+L T+
Sbjct: 246 LWLQHNAICHLPVSLFSSLHNLTFLSLKDNALRTLPEGLFAHNQGLLHLSLSYNQLETIP 305
Query: 820 AGAFRGLQVLDMLDLSNNSLTSVPEGLWASL 912
GAF L L L LS+N++T +PE ++ +L
Sbjct: 306 EGAFTNLSRLVSLTLSHNAITDLPEHVFRNL 336
Score = 104 bits (260), Expect = 1e-22
Identities = 86/279 (30%), Positives = 125/279 (44%), Gaps = 7/279 (2%)
Frame = +1
Query: 97 PGSWEPHLCRIXXXXXXXXXSAKGVTPDPNACLVFHSSNGSSISCQ-------PPAKFPH 255
PG+W LC + A+ P P C F G + C PP PH
Sbjct: 3 PGAW---LCWVSLLLL-----ARLTQPCPVGCDCF----GREVFCSDEQLADIPPDIPPH 50
Query: 256 YLPADTIYLATEFFNLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLT 435
D +++ T F T + G PNL ++ N Q+ L +P+L+ L++T
Sbjct: 51 I--TDIVFVETAF---TTVRTRAFSGSPNLTKVVFLNTQVRHLEPDAFGGLPRLQDLEIT 105
Query: 436 RNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLL 615
+ + L +F ++L L L +RL L + L L L GNQLRTLP +L
Sbjct: 106 GSPVSNLSAHIFSNLSSLEKLTLDFDRLAGLPEDLFCHMDILESLQLQGNQLRTLPGRLF 165
Query: 616 ANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLN 795
+ DL L+L N L LP + L+ L L N L L EG L L+ LFL+
Sbjct: 166 QSLRDLRTLNLAQNLLTQLPKGAFQSLTGLQMLKLSNNMLARLPEGALGSLSSLQELFLD 225
Query: 796 NNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASL 912
N +T L+ F L L+ML L +N++ +P L++SL
Sbjct: 226 GNAITELSPHLFSQLFSLEMLWLQHNAICHLPVSLFSSL 264
>ref|NP_032174.2| platelet glycoprotein V precursor [Mus musculus].
Length = 567
Score = 110 bits (274), Expect = 3e-24
Identities = 75/205 (36%), Positives = 104/205 (50%), Gaps = 1/205 (0%)
Frame = +1
Query: 301 LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVS 480
L + ++ Q + NLQEL L+ NQL L A + +LK+LDL+RN L LP GL
Sbjct: 134 LRDLDQNLFQQLRNLQELGLNQNQLSFLPANLFSSLRELKLLDLSRNNLTHLPKGLLGAQ 193
Query: 481 AALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQ 660
L L+L N+L +D+ L L AL L L N LR++ +L L L N
Sbjct: 194 VKLEKLLLYSNQLTSVDSGLLSNLGALTELRLERNHLRSVAPGAFDRLGNLSSLTLSGNL 253
Query: 661 LQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGL 840
L++LPP L + L L N L+ L + LR L+LN L+TL A AFR L
Sbjct: 254 LESLPPALFLHVSSVSRLTLFENPLEELPDVLFGEMAGLRELWLNGTHLSTLPAAAFRNL 313
Query: 841 QVLDMLDLSNN-SLTSVPEGLWASL 912
L L L+ N L+++P G++ L
Sbjct: 314 SGLQTLGLTRNPRLSALPRGVFQGL 338
Score = 105 bits (261), Expect = 9e-23
Identities = 71/191 (37%), Positives = 98/191 (51%)
Frame = +1
Query: 331 GIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKE 510
G+ LQ L LS++ + + + +LK L LTRN + RLP + L L L
Sbjct: 72 GMTVLQRLMLSDSHISAIDPGTFNDLVKLKTLRLTRNKISRLPRAILDKMVLLEQLFLDH 131
Query: 511 NRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLR 690
N L LD + + L+ L+ L L+ NQL LP L ++ +L +LDL N L LP LL
Sbjct: 132 NALRDLDQNLFQQLRNLQELGLNQNQLSFLPANLFSSLRELKLLDLSRNNLTHLPKGLLG 191
Query: 691 GPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSN 870
+KLE L L N+L ++ G L+ L L L N L ++A GAF L L L LS
Sbjct: 192 AQVKLEKLLLYSNQLTSVDSGLLSNLGALTELRLERNHLRSVAPGAFDRLGNLSSLTLSG 251
Query: 871 NSLTSVPEGLW 903
N L S+P L+
Sbjct: 252 NLLESLPPALF 262
Score = 93.2 bits (230), Expect = 4e-19
Identities = 77/261 (29%), Positives = 115/261 (44%), Gaps = 25/261 (9%)
Frame = +1
Query: 298 NLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRL------- 456
NLT +P +L L++L L +NQL + + L + L L L RN L+ +
Sbjct: 181 NLTHLPKGLLGAQVKLEKLLLYSNQLTSVDSGLLSNLGALTELRLERNHLRSVAPGAFDR 240
Query: 457 -----------------PPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGN 585
PP LF +++ L L EN L+ L + LR L L+G
Sbjct: 241 LGNLSSLTLSGNLLESLPPALFLHVSSVSRLTLFENPLEELPDVLFGEMAGLRELWLNGT 300
Query: 586 QLRTLPRKLLANFTDLHILDLGNN-QLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLA 762
L TLP N + L L L N +L LP + +G +L L L N L L + L
Sbjct: 301 HLSTLPAAAFRNLSGLQTLGLTRNPRLSALPRGVFQGLRELRVLALHTNALAELRDDALR 360
Query: 763 PQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASLGKAAGNMKVG 942
LR + L +N+L L FR L L+ + L +N L ++P ++A+L + +
Sbjct: 361 GLGHLRQVSLRHNRLRALPRTLFRNLSSLESVQLEHNQLETLPGDVFAALPQLTQVL--- 417
Query: 943 FEISGNPWICDQKLNDLYRWL 1005
+ NPW+CD L +WL
Sbjct: 418 --LGHNPWLCDCGLWPFLQWL 436
Score = 77.4 bits (189), Expect = 2e-14
Identities = 62/190 (32%), Positives = 89/190 (46%)
Frame = +1
Query: 343 LQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLD 522
L+ L L+ N++ L L + L+ L L NAL+ L LF+ L L L +N+L
Sbjct: 100 LKTLRLTRNKISRLPRAILDKMVLLEQLFLDHNALRDLDQNLFQQLRNLQELGLNQNQLS 159
Query: 523 ILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLK 702
L A+ L+ L+ LDLS N L LP+ LL L L L +NQL ++ LL
Sbjct: 160 FLPANLFSSLRELKLLDLSRNNLTHLPKGLLGAQVKLEKLLLYSNQLTSVDSGLLSNLGA 219
Query: 703 LEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLT 882
L L LE N L+ + G L L L+ N L +L F + + L L N L
Sbjct: 220 LTELRLERNHLRSVAPGAFDRLGNLSSLTLSGNLLESLPPALFLHVSSVSRLTLFENPLE 279
Query: 883 SVPEGLWASL 912
+P+ L+ +
Sbjct: 280 ELPDVLFGEM 289
>ref|NP_083249.1| leucine-rich repeat-containing protein 15 precursor [Mus musculus].
Length = 579
Score = 109 bits (272), Expect = 5e-24
Identities = 74/235 (31%), Positives = 104/235 (44%)
Frame = +1
Query: 301 LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVS 480
L+ +P + NLQEL L NQ+ LS L+ L L+ N + LPPG+F
Sbjct: 209 LSDIPMGTFDALGNLQELALQENQIGTLSPGLFHNNRNLQRLYLSNNHISHLPPGIFMQL 268
Query: 481 AALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQ 660
L+ L L N L L + LR L L N + +LP ++ L +L L +NQ
Sbjct: 269 PHLNKLTLFGNSLKELSPGVFGPMPNLRELWLYNNHITSLPDNAFSHLNQLQVLILSHNQ 328
Query: 661 LQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGL 840
L + P G L L L N LQ L+ LR + L NN+L L F +
Sbjct: 329 LSYISPGAFNGLTNLRELSLHTNALQDLDGNVFRSLANLRNVSLQNNRLRQLPGSIFANV 388
Query: 841 QVLDMLDLSNNSLTSVPEGLWASLGKAAGNMKVGFEISGNPWICDQKLNDLYRWL 1005
L + L NN+L ++P G++ LG + NPW CD + L+ WL
Sbjct: 389 NGLMTIQLQNNNLENLPLGIFDHLGNLC-----ELRLYDNPWRCDSNILPLHDWL 438
Score = 96.7 bits (239), Expect = 3e-20
Identities = 76/228 (33%), Positives = 101/228 (44%), Gaps = 24/228 (10%)
Frame = +1
Query: 301 LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLF--- 471
L +P + Q + NL+ L LSNNQL + LK L L N L+ +P G+F
Sbjct: 113 LKNLPVRLFQDVNNLETLLLSNNQLVQIQPAQFSQFSNLKELQLYGNNLEYIPEGVFDHL 172
Query: 472 ----KVSAA-----------------LHTLVLKENRLDILDASWLRGLKALRHLDLSGNQ 588
K++ L L L ENRL + L L+ L L NQ
Sbjct: 173 VGLTKLNLGNNGFTHLSPRVFQHLGNLQVLRLYENRLSDIPMGTFDALGNLQELALQENQ 232
Query: 589 LRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQ 768
+ TL L N +L L L NN + LPP + L L L GN L+ L G P
Sbjct: 233 IGTLSPGLFHNNRNLQRLYLSNNHISHLPPGIFMQLPHLNKLTLFGNSLKELSPGVFGPM 292
Query: 769 PKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASL 912
P LR L+L NN +T+L AF L L +L LS+N L+ + G + L
Sbjct: 293 PNLRELWLYNNHITSLPDNAFSHLNQLQVLILSHNQLSYISPGAFNGL 340
Score = 94.4 bits (233), Expect = 2e-19
Identities = 72/244 (29%), Positives = 110/244 (45%)
Frame = +1
Query: 181 PNACLVFHSSNGSSISCQPPAKFPHYLPADTIYLATEFFNLTQMPADILQGIPNLQELHL 360
P+ C +S Q A P LP + + L ++T++P D I L L +
Sbjct: 26 PSECTCSRASQVECTGAQIVA-MPSPLPWNAMSLQILNTHITELPEDKFLNISALIALKM 84
Query: 361 SNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASW 540
N+L ++ + L+ L L N LK LP LF+ L TL+L N+L + +
Sbjct: 85 EKNELANIMPGAFRNLGSLRHLSLANNKLKNLPVRLFQDVNNLETLLLSNNQLVQIQPAQ 144
Query: 541 LRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHL 720
L+ L L GN L +P + + L L+LGNN L P + + L+ L L
Sbjct: 145 FSQFSNLKELQLYGNNLEYIPEGVFDHLVGLTKLNLGNNGFTHLSPRVFQHLGNLQVLRL 204
Query: 721 EGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGL 900
NRL + G L+ L L N++ TL+ G F + L L LSNN ++ +P G+
Sbjct: 205 YENRLSDIPMGTFDALGNLQELALQENQIGTLSPGLFHNNRNLQRLYLSNNHISHLPPGI 264
Query: 901 WASL 912
+ L
Sbjct: 265 FMQL 268
Score = 80.1 bits (196), Expect = 3e-15
Identities = 55/164 (33%), Positives = 80/164 (48%)
Frame = +1
Query: 424 LDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLP 603
L + + LP F +AL L +++N L + R L +LRHL L+ N+L+ LP
Sbjct: 58 LQILNTHITELPEDKFLNISALIALKMEKNELANIMPGAFRNLGSLRHLSLANNKLKNLP 117
Query: 604 RKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRY 783
+L + +L L L NNQL + P L+ L L GN L+ + EG L
Sbjct: 118 VRLFQDVNNLETLLLSNNQLVQIQPAQFSQFSNLKELQLYGNNLEYIPEGVFDHLVGLTK 177
Query: 784 LFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASLG 915
L L NN T L+ F+ L L +L L N L+ +P G + +LG
Sbjct: 178 LNLGNNGFTHLSPRVFQHLGNLQVLRLYENRLSDIPMGTFDALG 221
Score = 77.0 bits (188), Expect = 3e-14
Identities = 46/126 (36%), Positives = 64/126 (50%)
Frame = +1
Query: 298 NLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKV 477
+L ++ + +PNL+EL L NN + L + QL+VL L+ N L + PG F
Sbjct: 280 SLKELSPGVFGPMPNLRELWLYNNHITSLPDNAFSHLNQLQVLILSHNQLSYISPGAFNG 339
Query: 478 SAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNN 657
L L L N L LD + R L LR++ L N+LR LP + AN L + L NN
Sbjct: 340 LTNLRELSLHTNALQDLDGNVFRSLANLRNVSLQNNRLRQLPGSIFANVNGLMTIQLQNN 399
Query: 658 QLQTLP 675
L+ LP
Sbjct: 400 NLENLP 405
>ref|NP_032366.2| insulin-like growth factor-binding protein complex acid labile
subunit precursor [Mus musculus].
Length = 603
Score = 108 bits (270), Expect = 8e-24
Identities = 75/223 (33%), Positives = 113/223 (50%)
Frame = +1
Query: 244 KFPHYLPADTIYLATEFFNLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKV 423
+ P +P T L + NL+ +P+ Q + +L L+L + L L + LL + L
Sbjct: 67 QLPDSIPVSTRALWLDGNNLSSIPSAAFQNLSSLDFLNLQGSWLRSLEPQALLGLQNLYH 126
Query: 424 LDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLP 603
L L RN L+ L GLF+ + +L +L L N L L+ RGL L L+L N L LP
Sbjct: 127 LHLERNLLRSLAAGLFRHTPSLASLSLGNNLLGRLEEGLFRGLSHLWDLNLGWNSLVVLP 186
Query: 604 RKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRY 783
+ +LH L L N+L L P LL G +L L L N L+ ++ P+L+
Sbjct: 187 DTVFQGLGNLHELVLAGNKLTYLQPALLCGLGELRELDLSRNALRSVKANVFIHLPRLQK 246
Query: 784 LFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASL 912
L+L+ N +T +A AF G++ L LDLS+N + + E + L
Sbjct: 247 LYLDRNLITAVAPRAFLGMKALRWLDLSHNRVAGLLEDTFPGL 289
Score = 107 bits (268), Expect = 1e-23
Identities = 71/207 (34%), Positives = 109/207 (52%)
Frame = +1
Query: 298 NLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKV 477
+L +P + QG+ NL EL L+ N+L L L + +L+ LDL+RNAL+ + +F
Sbjct: 181 SLVVLPDTVFQGLGNLHELVLAGNKLTYLQPALLCGLGELRELDLSRNALRSVKANVFIH 240
Query: 478 SAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNN 657
L L L N + + G+KALR LDLS N++ L LH+L L +N
Sbjct: 241 LPRLQKLYLDRNLITAVAPRAFLGMKALRWLDLSHNRVAGLLEDTFPGLLGLHVLRLAHN 300
Query: 658 QLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRG 837
+ +L P + LE L L NR++ L E +L L LN+N++ + GAF G
Sbjct: 301 AITSLRPRTFKDLHFLEELQLGHNRIRQLGEKTFEGLGQLEVLTLNDNQIHEVKVGAFFG 360
Query: 838 LQVLDMLDLSNNSLTSVPEGLWASLGK 918
L + +++LS N L S+PE ++ LG+
Sbjct: 361 LFNVAVMNLSGNCLRSLPEHVFQGLGR 387
Score = 106 bits (264), Expect = 4e-23
Identities = 77/236 (32%), Positives = 117/236 (49%), Gaps = 5/236 (2%)
Frame = +1
Query: 301 LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVS 480
+ Q+ +G+ L+ L L++NQ+ ++ + + V++L+ N L+ LP +F+
Sbjct: 326 IRQLGEKTFEGLGQLEVLTLNDNQIHEVKVGAFFGLFNVAVMNLSGNCLRSLPEHVFQGL 385
Query: 481 AALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQ 660
LH+L L+ + L + GL LR L L N + ++ + LA ++L LDL NQ
Sbjct: 386 GRLHSLHLEHSCLGRIRLHTFAGLSGLRRLFLRDNSISSIEEQSLAGLSELLELDLTANQ 445
Query: 661 LQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGL 840
L LP L +G +LE+L L N+L +L E L P + +L L++N+L T A G F L
Sbjct: 446 LTHLPRQLFQGLGQLEYLLLSNNQLTMLSEDVLGPLQRAFWLDLSHNRLETPAEGLFSSL 505
Query: 841 QVLDMLDLSNNSL-TSVP----EGLWASLGKAAGNMKVGFEISGNPWICDQKLNDL 993
L L+L NNSL T VP E LW + NPW C L L
Sbjct: 506 GRLRYLNLRNNSLQTFVPQPGLERLW---------------LDANPWDCSCPLKAL 546
Score = 97.4 bits (241), Expect = 2e-20
Identities = 72/226 (31%), Positives = 112/226 (49%)
Frame = +1
Query: 211 NGSSISCQPPAKFPHYLPADTIYLATEFFNLTQMPADILQGIPNLQELHLSNNQLEDLSA 390
+G+++S P A F + D + L + L + L G+ NL LHL N L L+A
Sbjct: 82 DGNNLSSIPSAAFQNLSSLDFLNLQGSW--LRSLEPQALLGLQNLYHLHLERNLLRSLAA 139
Query: 391 KFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHL 570
P L L L N L RL GLF+ + L L L N L +L + +GL L L
Sbjct: 140 GLFRHTPSLASLSLGNNLLGRLEEGLFRGLSHLWDLNLGWNSLVVLPDTVFQGLGNLHEL 199
Query: 571 DLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEE 750
L+GN+L L LL +L LDL N L+++ ++ +L+ L+L+ N + +
Sbjct: 200 VLAGNKLTYLQPALLCGLGELRELDLSRNALRSVKANVFIHLPRLQKLYLDRNLITAVAP 259
Query: 751 GFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSV 888
LR+L L++N++ L F GL L +L L++N++TS+
Sbjct: 260 RAFLGMKALRWLDLSHNRVAGLLEDTFPGLLGLHVLRLAHNAITSL 305
Score = 84.0 bits (206), Expect = 2e-16
Identities = 65/230 (28%), Positives = 102/230 (44%), Gaps = 24/230 (10%)
Frame = +1
Query: 301 LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVS 480
L + A++ +P LQ+L+L N + ++ + L + L+ LDL+ N + L F
Sbjct: 230 LRSVKANVFIHLPRLQKLYLDRNLITAVAPRAFLGMKALRWLDLSHNRVAGLLEDTFPGL 289
Query: 481 AALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQ 660
LH L L N + L + L L L L N++R L K L +L L +NQ
Sbjct: 290 LGLHVLRLAHNAITSLRPRTFKDLHFLEELQLGHNRIRQLGEKTFEGLGQLEVLTLNDNQ 349
Query: 661 ------------------------LQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQ 768
L++LP + +G +L LHLE + L + A
Sbjct: 350 IHEVKVGAFFGLFNVAVMNLSGNCLRSLPEHVFQGLGRLHSLHLEHSCLGRIRLHTFAGL 409
Query: 769 PKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASLGK 918
LR LFL +N ++++ + GL L LDL+ N LT +P L+ LG+
Sbjct: 410 SGLRRLFLRDNSISSIEEQSLAGLSELLELDLTANQLTHLPRQLFQGLGQ 459
Score = 72.0 bits (175), Expect = 9e-13
Identities = 47/118 (39%), Positives = 60/118 (50%)
Frame = +1
Query: 562 RHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQV 741
R L L GN L ++P N + L L+L + L++L P L G L LHLE N L+
Sbjct: 77 RALWLDGNNLSSIPSAAFQNLSSLDFLNLQGSWLRSLEPQALLGLQNLYHLHLERNLLRS 136
Query: 742 LEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASLG 915
L G P L L L NN L L G FRGL L L+L NSL +P+ ++ LG
Sbjct: 137 LAAGLFRHTPSLASLSLGNNLLGRLEEGLFRGLSHLWDLNLGWNSLVVLPDTVFQGLG 194
Score = 61.2 bits (147), Expect = 2e-09
Identities = 55/169 (32%), Positives = 77/169 (45%)
Frame = +1
Query: 412 QLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQL 591
+L V +RN L +LP + + L L N L + ++ + L +L L+L G+ L
Sbjct: 55 ELSVFCSSRN-LTQLPDS---IPVSTRALWLDGNNLSSIPSAAFQNLSSLDFLNLQGSWL 110
Query: 592 RTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQP 771
R+L + L +L+ L L N L++L L R L L L N L LEEG
Sbjct: 111 RSLEPQALLGLQNLYHLHLERNLLRSLAAGLFRHTPSLASLSLGNNLLGRLEEGLFRGLS 170
Query: 772 KLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASLGK 918
L L L N L L F+GL L L L+ N LT + L LG+
Sbjct: 171 HLWDLNLGWNSLVVLPDTVFQGLGNLHELVLAGNKLTYLQPALLCGLGE 219
>ref|NP_848846.3| leucine-rich repeat transmembrane neuronal protein 4 [Mus musculus].
Length = 518
Score = 100 bits (250), Expect = 2e-21
Identities = 84/298 (28%), Positives = 130/298 (43%), Gaps = 27/298 (9%)
Frame = +1
Query: 274 IYLATEFFNLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKR 453
I+L + ++ + D QGI L+EL LS+N++ L K PVP L+ LDL+ N L+
Sbjct: 88 IWLYLDHNYISSVDEDAFQGIRRLKELILSSNKITYLHNKTFHPVPNLRNLDLSYNKLQT 147
Query: 454 LPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDL 633
L FK GL+ L L L N L+T+P ++ + +L
Sbjct: 148 LQSEQFK------------------------GLRKLIILHLRSNSLKTVPIRVFQDCRNL 183
Query: 634 HILDLGNNQLQTLPPDLLRGPLKLEWLHLE------------------------GNRLQV 741
LDLG N+L++L + G LKL+ LHLE NR++
Sbjct: 184 DFLDLGYNRLRSLSRNAFAGLLKLKELHLEHNQFSKINFAHFPRLFNLRSIYLQWNRIRS 243
Query: 742 LEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPE---GLWASL 912
+ +G L L L+ N + + G F+ L L L+L +N LT+V + W SL
Sbjct: 244 VSQGLTWTWSSLHTLDLSGNDIQAIEPGTFKCLPNLQKLNLDSNKLTNVSQETVNAWISL 303
Query: 913 GKAAGNMKVGFEISGNPWICDQKLNDLYRWLCGQRKTRCFFQNNTSLCWPQKALGGAK 1086
+ +SGN W C + + L+ WL + + +T +C K + G K
Sbjct: 304 --------ISITLSGNMWECSRSICPLFYWLKNFKGNK----ESTMICAGPKHIQGEK 349
>ref|NP_001157792.1| chondroadherin-like [Mus musculus].
Length = 748
Score = 100 bits (249), Expect = 2e-21
Identities = 93/330 (28%), Positives = 138/330 (41%), Gaps = 19/330 (5%)
Frame = +1
Query: 79 PEGKQSPGSWEPHLCRIXXXXXXXXXSAKGVTPDPNACLVFHSSNGSSISCQPPAKFPHY 258
P G ++P PH A TP P AC + S+ + P
Sbjct: 374 PAGPRAPPLRSPH------------GEAAWATPCPPACACVAETRHSTCDGRGLQAVPRG 421
Query: 259 LPADTIYLATEFFNLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTR 438
P DT L + +P G+ +L LHL + + +L L + +L L L+
Sbjct: 422 FPNDTQLLDLRRNHFPSVPRAAFPGLRHLVSLHLQHCGVAELEPGALAGLDRLLYLYLSH 481
Query: 439 NALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLA 618
N L L + + L L L+ NR + + LR L L L L N + L LA
Sbjct: 482 NQLSGLSAAALEGAPNLGYLYLEHNRFLRIPGTALRALPTLVSLHLQDNAVDRLAPGDLA 541
Query: 619 NFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNN 798
L L L N + + P L +LE LHL+ NRL+ + G L P L+ L L+
Sbjct: 542 GARALRCLYLSGNHITQVSPGALGPARELEKLHLDRNRLREVPTGALEGLPALKELQLSG 601
Query: 799 NKLTTLAAGAFRGL-QVLDMLDLSNNSLTSVPEGLWASLGKAAGNMKV------------ 939
N L L GAF+ + + L L L+++ L + ++ LGK ++ +
Sbjct: 602 NPLRALPDGAFQPVGRSLQQLFLNSSDLEQISPRAFSGLGKGLRSLYLHKNQLQSLPAPL 661
Query: 940 ---GFE---ISGNPWICDQKLNDLYRWLCG 1011
G E +SGNP+ CD +L L+RWL G
Sbjct: 662 GLSGLELVDLSGNPFHCDCQLLPLHRWLTG 691
Score = 93.6 bits (231), Expect = 3e-19
Identities = 73/200 (36%), Positives = 93/200 (46%), Gaps = 1/200 (0%)
Frame = +1
Query: 298 NLTQMPADILQGIPNL-QELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFK 474
NLT++P IP L Q L L N L+ L A +P L LDL ++ + G F+
Sbjct: 51 NLTEVP----NTIPELTQRLDLQGNILKVLPAAAFQDLPHLTHLDLRNCQVEMVAEGAFR 106
Query: 475 VSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGN 654
L L L NRL L L GL +LR L+L GN L L L L+L +
Sbjct: 107 GLGRLLLLNLASNRLSTLPQEALDGLGSLRRLELEGNMLEELRPGTFGALGSLTTLNLAH 166
Query: 655 NQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFR 834
N L LP +G L+ WL L N L VL LA P LR L L++N+L L A
Sbjct: 167 NALVYLPAMAFQGLLRTRWLQLSHNALSVLAPEALAGLPALRRLSLHHNELQALPGAALS 226
Query: 835 GLQVLDMLDLSNNSLTSVPE 894
+ L L+L +N LT E
Sbjct: 227 QARSLARLELGHNPLTYTGE 246
Score = 91.7 bits (226), Expect = 1e-18
Identities = 92/303 (30%), Positives = 123/303 (40%), Gaps = 24/303 (7%)
Frame = +1
Query: 181 PNACLVFHSSNGSSISCQPPAKFPHYLPADTIYLATEFFNLTQMPADILQGIPNLQELHL 360
P C+ +S + Q + P+ +P T L + L +PA Q +P+L L L
Sbjct: 33 PQTCVCDNSRRHVTCRHQNLTEVPNTIPELTQRLDLQGNILKVLPAAAFQDLPHLTHLDL 92
Query: 361 SNNQLE----------------DLSAKFLLPVPQ--------LKVLDLTRNALKRLPPGL 468
N Q+E +L++ L +PQ L+ L+L N L+ L PG
Sbjct: 93 RNCQVEMVAEGAFRGLGRLLLLNLASNRLSTLPQEALDGLGSLRRLELEGNMLEELRPGT 152
Query: 469 FKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDL 648
F +L TL L N L L A +GL R L LS N L L + LA L L L
Sbjct: 153 FGALGSLTTLNLAHNALVYLPAMAFQGLLRTRWLQLSHNALSVLAPEALAGLPALRRLSL 212
Query: 649 GNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGA 828
+N+LQ LP L L L L N L E P LR L L++ L L A
Sbjct: 213 HHNELQALPGAALSQARSLARLELGHNPLTYTGEEDGLALPGLRELALDHGSLQALGPRA 272
Query: 829 FRGLQVLDMLDLSNNSLTSVPEGLWASLGKAAGNMKVGFEISGNPWICDQKLNDLYRWLC 1008
F L LDL N LT++P + G ++ + GNP C L WL
Sbjct: 273 FAHCPRLHTLDLRGNQLTTLPP------LQVPGQLR-RLRLQGNPLWCACHARPLLEWLV 325
Query: 1009 GQR 1017
R
Sbjct: 326 RAR 328
>ref|NP_766259.2| leucine-rich repeat-containing G-protein coupled receptor 4
precursor [Mus musculus].
Length = 951
Score = 100 bits (248), Expect = 3e-21
Identities = 71/219 (32%), Positives = 102/219 (46%)
Frame = +1
Query: 250 PHYLPADTIYLATEFFNLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLD 429
P L A T L N+TQ+P D + P L+EL L+ N L + K L + +LKVL
Sbjct: 52 PEGLSAFTQALDISMNNITQLPEDAFKNFPFLEELQLAGNDLSFIHPKALSGLKELKVLT 111
Query: 430 LTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRK 609
L N LK +P + +AL +L L N + + GL LRHL L N L +P +
Sbjct: 112 LQNNQLKTVPSEAIRGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNILTEVPVR 171
Query: 610 LLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLF 789
L+N L L L N + ++P L LHL N+++ L + L L
Sbjct: 172 PLSNLPTLQALTLALNNISSIPDFAFTNLSSLVVLHLHNNKIKSLSQHCFDGLDNLETLD 231
Query: 790 LNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWA 906
LN N L A + L L L +NS++ +P+G +A
Sbjct: 232 LNYNNLDEFPQ-AIKALPSLKELGFHSNSISVIPDGAFA 269
Score = 78.6 bits (192), Expect = 9e-15
Identities = 69/251 (27%), Positives = 114/251 (45%), Gaps = 25/251 (9%)
Frame = +1
Query: 331 GIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKE 510
G+ NL+ L L+ N L++ + + +P LK L N++ +P G F + L T+ L +
Sbjct: 223 GLDNLETLDLNYNNLDEFP-QAIKALPSLKELGFHSNSISVIPDGAFAGNPLLRTIHLYD 281
Query: 511 NRLDILDAS--------------------WLRGLKALRHLD---LSGNQLRTLPRKLLAN 621
N L + S W L HL+ L+G ++ ++P L N
Sbjct: 282 NPLSFVGNSAFHNLSDLHSLVIRGASLVQWFPNLAGTVHLESLTLTGTKISSIPDDLCQN 341
Query: 622 FTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNN 801
L LDL N ++ LP G LE + L+ N++ +++E LR L L+ N
Sbjct: 342 QKMLRTLDLSYNDIRDLPS--FNGCRALEEISLQRNQISLIKETTFQGLTSLRILDLSRN 399
Query: 802 KLTTLAAGAFRGLQVLDMLDLSNNSLTSVP-EGL-WASLGKAAGNMKVGFEISGNPWICD 975
+ + +GAF L + LD+S N LTS P EGL + K GN ++ ++ +
Sbjct: 400 LIREIHSGAFAKLGTITNLDVSFNELTSFPTEGLNGLNQLKLVGNFQLKDALAARDFANL 459
Query: 976 QKLNDLYRWLC 1008
+ L+ Y + C
Sbjct: 460 RSLSVPYAYQC 470
Score = 76.6 bits (187), Expect = 4e-14
Identities = 49/163 (30%), Positives = 82/163 (50%)
Frame = +1
Query: 424 LDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLP 603
+D + L +P GL SA L + N + L + L L L+GN L +
Sbjct: 41 VDCSGKGLTAVPEGL---SAFTQALDISMNNITQLPEDAFKNFPFLEELQLAGNDLSFIH 97
Query: 604 RKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRY 783
K L+ +L +L L NNQL+T+P + +RG L+ L L+ N + + E +LR+
Sbjct: 98 PKALSGLKELKVLTLQNNQLKTVPSEAIRGLSALQSLRLDANHITSVPEDSFEGLVQLRH 157
Query: 784 LFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASL 912
L+L++N LT + L L L L+ N+++S+P+ + +L
Sbjct: 158 LWLDDNILTEVPVRPLSNLPTLQALTLALNNISSIPDFAFTNL 200
Score = 57.0 bits (136), Expect = 3e-08
Identities = 57/200 (28%), Positives = 89/200 (44%), Gaps = 21/200 (10%)
Frame = +1
Query: 193 LVFHSSNGSSISCQPPAKFPHYLPADTIYLA---------TEFFNLTQMP------ADIL 327
L FHS+ SIS P F TI+L + F NL+ + A ++
Sbjct: 253 LGFHSN---SISVIPDGAFAGNPLLRTIHLYDNPLSFVGNSAFHNLSDLHSLVIRGASLV 309
Query: 328 QGIPNL------QELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAAL 489
Q PNL + L L+ ++ + L+ LDL+ N ++ LP F AL
Sbjct: 310 QWFPNLAGTVHLESLTLTGTKISSIPDDLCQNQKMLRTLDLSYNDIRDLPS--FNGCRAL 367
Query: 490 HTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQT 669
+ L+ N++ ++ + +GL +LR LDLS N +R + A + LD+ N+L +
Sbjct: 368 EEISLQRNQISLIKETTFQGLTSLRILDLSRNLIREIHSGAFAKLGTITNLDVSFNELTS 427
Query: 670 LPPDLLRGPLKLEWLHLEGN 729
P + L G L L L GN
Sbjct: 428 FPTEGLNG---LNQLKLVGN 444
>ref|NP_848793.1| leucine-rich repeat transmembrane neuronal protein 3 precursor [Mus
musculus].
Length = 582
Score = 99.0 bits (245), Expect = 7e-21
Identities = 80/319 (25%), Positives = 141/319 (44%), Gaps = 30/319 (9%)
Frame = +1
Query: 214 GSSISC--QPPAKFPHYLPADTIYLATEFFNLTQMPADILQGIPNLQELHLSNNQLEDLS 387
G + C Q + P + A + L+ + +L ++ + +G+ L L+L +N + ++
Sbjct: 42 GKMVYCESQKLQEIPSSISAGCLGLSLRYNSLQKLKYNQFKGLNQLTWLYLDHNHISNID 101
Query: 388 AKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRH 567
+ +LK L L+ N + F+ L L L N+L L + RGL+ L
Sbjct: 102 ENAFNGIRRLKELILSSNRISYFLNNTFRPVTNLRNLDLSYNQLHSLGSEQFRGLRKLLS 161
Query: 568 LDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLE 747
L L N LRT+P ++ + +L +LDLG N++++L ++ G ++L+ LHLE N+ L
Sbjct: 162 LHLRSNSLRTIPVRIFQDCRNLELLDLGYNRIRSLARNVFAGMIRLKELHLEHNQFSKLN 221
Query: 748 EGFLAPQPKLRYLFLNNNKLTTLA---AGAFRGLQVLDM--------------------- 855
L+ L++ NK++ + + + LQ LD+
Sbjct: 222 LALFPRLVSLQNLYMQWNKISVIGQTMSWTWSSLQRLDLSGNEIEAFSGPSVFQCVPNLQ 281
Query: 856 -LDLSNNSLTSVPEGL---WASLGKAAGNMKVGFEISGNPWICDQKLNDLYRWLCGQRKT 1023
L+L +N LT + + + W SL ++GN W C + + L WL +
Sbjct: 282 RLNLDSNKLTFIGQEILDSWISLN--------DISLAGNIWECSRNICSLVNWLRSFKGL 333
Query: 1024 RCFFQNNTSLCWPQKALGG 1080
R NT +C K L G
Sbjct: 334 R----ENTIICASPKELQG 348
>ref|NP_954693.1| reticulon-4 receptor-like 2 precursor [Mus musculus].
Length = 420
Score = 98.6 bits (244), Expect = 9e-21
Identities = 77/225 (34%), Positives = 102/225 (45%), Gaps = 3/225 (1%)
Frame = +1
Query: 337 PNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENR 516
P+ Q L L NN + L P L L L N L + PG F+ AL L L +NR
Sbjct: 60 PSTQRLFLQNNLIRSLRPGTF--GPNLLTLWLFSNNLSTIHPGTFRHLQALEELDLGDNR 117
Query: 517 -LDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRG 693
L L+ +GL+ L+ L L QL +LP + L L L N L L DL
Sbjct: 118 HLRSLEPDTFQGLERLQSLHLYRCQLSSLPGNIFRGLVSLQYLYLQENSLLHLQDDLFAD 177
Query: 694 PLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNN 873
L L L GNRL++L E L L L+ N+L + AF GL L +L L NN
Sbjct: 178 LANLSHLFLHGNRLRLLTEHVFRGLGSLDRLLLHGNRLQGVHRAAFHGLSRLTILYLFNN 237
Query: 874 SLTSVPEGLWASLGKAAGNMKV--GFEISGNPWICDQKLNDLYRW 1002
SL S+P G+A ++ ++ NPW CD + L+ W
Sbjct: 238 SLASLP-------GEALADLPALEFLRLNANPWACDCRARPLWAW 275
Score = 75.1 bits (183), Expect = 1e-13
Identities = 62/183 (33%), Positives = 83/183 (45%)
Frame = +1
Query: 181 PNACLVFHSSNGSSISCQPPAKFPHYLPADTIYLATEFFNLTQMPADILQGIPNLQELHL 360
PN ++ SN ++S P F H + + L +L + D QG+ LQ LHL
Sbjct: 82 PNLLTLWLFSN--NLSTIHPGTFRHLQALEELDLGDNR-HLRSLEPDTFQGLERLQSLHL 138
Query: 361 SNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASW 540
QL L + L+ L L N+L L LF A L L L NRL +L
Sbjct: 139 YRCQLSSLPGNIFRGLVSLQYLYLQENSLLHLQDDLFADLANLSHLFLHGNRLRLLTEHV 198
Query: 541 LRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHL 720
RGL +L L L GN+L+ + R + L IL L NN L +LP + L LE+L L
Sbjct: 199 FRGLGSLDRLLLHGNRLQGVHRAAFHGLSRLTILYLFNNSLASLPGEALADLPALEFLRL 258
Query: 721 EGN 729
N
Sbjct: 259 NAN 261
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 42,131,653
Number of extensions: 1222321
Number of successful extensions: 7526
Number of sequences better than 1.0e-05: 176
Number of HSP's gapped: 6368
Number of HSP's successfully gapped: 539
Length of query: 402
Length of database: 15,617,559
Length adjustment: 104
Effective length of query: 298
Effective length of database: 12,493,815
Effective search space: 3723156870
Effective search space used: 3723156870
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-001980
(1207 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_003123119.1| PREDICTED: leucine-rich alpha-2-glycoprotein... 641 0.0
Alignment gi|XP_003123120.1| PREDICTED: leucine-rich alpha-2-glycoprotein... 474 e-134
Alignment gi|XP_003358804.1| PREDICTED: carboxypeptidase N subunit 2 [Sus... 114 8e-26
Alignment gi|XP_003358805.1| PREDICTED: leucine-rich repeat-containing pr... 114 1e-25
Alignment gi|NP_001041651.1| insulin-like growth factor-binding protein c... 109 3e-24
Alignment gi|XP_003132649.1| PREDICTED: platelet glycoprotein V-like [Sus... 106 3e-23
Alignment gi|XP_003123408.1| PREDICTED: podocan-like protein 1-like [Sus ... 100 1e-21
Alignment gi|XP_003125026.2| PREDICTED: leucine-rich repeat transmembrane... 100 2e-21
Alignment gi|XP_003125025.2| PREDICTED: leucine-rich repeat transmembrane... 100 2e-21
Alignment gi|XP_001924493.1| PREDICTED: leucine-rich repeat transmembrane... 100 3e-21
>ref|XP_003123119.1| PREDICTED: leucine-rich alpha-2-glycoprotein-like isoform 1 [Sus
scrofa].
Length = 356
Score = 641 bits (1653), Expect = 0.0
Identities = 321/346 (92%), Positives = 325/346 (93%)
Frame = +1
Query: 43 MEKGEATMSSWSPEGKQSPGSWEPHLCRIXXXXXXXXXSAKGVTPDPNACLVFHSSNGSS 222
MEKGEATMSSWSPEGKQSPGSWEPHLCRI SAKGVTPDPNACLVFHSSNGSS
Sbjct: 1 MEKGEATMSSWSPEGKQSPGSWEPHLCRILFLLLLFVVSAKGVTPDPNACLVFHSSNGSS 60
Query: 223 ISCQPPAKFPHYLPADTIYLATEFFNLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLL 402
ISCQPPAKFPHYLPADTIYLATEFFNLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLL
Sbjct: 61 ISCQPPAKFPHYLPADTIYLATEFFNLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLL 120
Query: 403 PVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSG 582
PVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSG
Sbjct: 121 PVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSG 180
Query: 583 NQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLA 762
NQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLA
Sbjct: 181 NQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLA 240
Query: 763 PQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASLGKAAGNMKVG 942
PQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASLGKAAGNMKVG
Sbjct: 241 PQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASLGKAAGNMKVG 300
Query: 943 FEISGNPWICDQKLNDLYRWLCGQRKTRCFFQNNTSLCWPQKALGG 1080
F+ISGNPWICDQKL+DLYRWL + + FFQNNT P KAL G
Sbjct: 301 FDISGNPWICDQKLDDLYRWLVA-NEDKMFFQNNTHCAGP-KALEG 344
>ref|XP_003123120.1| PREDICTED: leucine-rich alpha-2-glycoprotein-like isoform 2 [Sus
scrofa].
Length = 267
Score = 474 bits (1220), Expect = e-134
Identities = 241/257 (93%), Positives = 245/257 (95%)
Frame = +1
Query: 310 MPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAAL 489
MPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAAL
Sbjct: 1 MPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAAL 60
Query: 490 HTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQT 669
HTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQT
Sbjct: 61 HTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQT 120
Query: 670 LPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVL 849
LPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVL
Sbjct: 121 LPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVL 180
Query: 850 DMLDLSNNSLTSVPEGLWASLGKAAGNMKVGFEISGNPWICDQKLNDLYRWLCGQRKTRC 1029
DMLDLSNNSLTSVPEGLWASLGKAAGNMKVGF+ISGNPWICDQKL+DLYRWL + +
Sbjct: 181 DMLDLSNNSLTSVPEGLWASLGKAAGNMKVGFDISGNPWICDQKLDDLYRWLVA-NEDKM 239
Query: 1030 FFQNNTSLCWPQKALGG 1080
FFQNNT P KAL G
Sbjct: 240 FFQNNTHCAGP-KALEG 255
Score = 57.0 bits (136), Expect = 2e-08
Identities = 39/107 (36%), Positives = 51/107 (47%)
Frame = +1
Query: 301 LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVS 480
L +P +L +L L L NNQL+ L L +L+ L L N L+ L G
Sbjct: 94 LRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQ 153
Query: 481 AALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLAN 621
L L L N+L L A RGL+ L LDLS N L ++P L A+
Sbjct: 154 PKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWAS 200
>ref|XP_003358804.1| PREDICTED: carboxypeptidase N subunit 2 [Sus scrofa].
Length = 547
Score = 114 bits (286), Expect = 8e-26
Identities = 74/216 (34%), Positives = 107/216 (49%)
Frame = +1
Query: 265 ADTIYLATEFFNLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNA 444
A + F L +P + + L+ L L NQL+ L P+ LK L+L +N
Sbjct: 121 ASLVKFTLNFNKLEALPEGLFGHMDALESLQLQGNQLQTLPRHLFQPLRHLKTLNLAQNL 180
Query: 445 LKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANF 624
L +LP LF +L TL L N L L L +L+ L L GN + LP ++ A
Sbjct: 181 LAQLPEELFHPLGSLETLRLSNNVLASLPKGVFGKLSSLQELFLDGNSISELPPEVFAQL 240
Query: 625 TDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNK 804
L L L N ++ LPP + L +L+L+GN L++L G A P L L L++N+
Sbjct: 241 PHLEKLWLQRNAIRQLPPAIFSSLGNLTFLNLQGNALKMLPTGLFAHSPGLISLSLSHNQ 300
Query: 805 LTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASL 912
L + GAF L L L LS+N+LT +P G++ L
Sbjct: 301 LEMVPEGAFANLSSLGSLTLSHNALTHLPTGVFRGL 336
Score = 101 bits (251), Expect = 1e-21
Identities = 73/228 (32%), Positives = 105/228 (46%), Gaps = 3/228 (1%)
Frame = +1
Query: 241 AKFPHYLP---ADTIYLATEFFNLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVP 411
A P +P D I++ T F T + A G PNL ++ N Q+ +P
Sbjct: 41 AAIPRDIPPHATDIIFVETSF---TTVGARAFSGSPNLTKVVFLNTQVCHFGPDAFGGLP 97
Query: 412 QLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQL 591
+L+ L++T A L +F A+L L N+L+ L + AL L L GNQL
Sbjct: 98 RLQDLEITGGAFSNLSSNIFSNLASLVKFTLNFNKLEALPEGLFGHMDALESLQLQGNQL 157
Query: 592 RTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQP 771
+TLPR L L L+L N L LP +L LE L L N L L +G
Sbjct: 158 QTLPRHLFQPLRHLKTLNLAQNLLAQLPEELFHPLGSLETLRLSNNVLASLPKGVFGKLS 217
Query: 772 KLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASLG 915
L+ LFL+ N ++ L F L L+ L L N++ +P +++SLG
Sbjct: 218 SLQELFLDGNSISELPPEVFAQLPHLEKLWLQRNAIRQLPPAIFSSLG 265
Score = 96.7 bits (239), Expect = 2e-20
Identities = 65/196 (33%), Positives = 93/196 (47%)
Frame = +1
Query: 319 DILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTL 498
D G+P LQ+L ++ +LS+ + L L N L+ LP GLF AL +L
Sbjct: 91 DAFGGLPRLQDLEITGGAFSNLSSNIFSNLASLVKFTLNFNKLEALPEGLFGHMDALESL 150
Query: 499 VLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPP 678
L+ N+L L + L+ L+ L+L+ N L LP +L L L L NN L +LP
Sbjct: 151 QLQGNQLQTLPRHLFQPLRHLKTLNLAQNLLAQLPEELFHPLGSLETLRLSNNVLASLPK 210
Query: 679 DLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDML 858
+ L+ L L+GN + L A P L L+L N + L F L L L
Sbjct: 211 GVFGKLSSLQELFLDGNSISELPPEVFAQLPHLEKLWLQRNAIRQLPPAIFSSLGNLTFL 270
Query: 859 DLSNNSLTSVPEGLWA 906
+L N+L +P GL+A
Sbjct: 271 NLQGNALKMLPTGLFA 286
Score = 66.6 bits (161), Expect = 3e-11
Identities = 47/139 (33%), Positives = 63/139 (45%)
Frame = +1
Query: 547 GLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEG 726
GL L+ L+++G L + +N L L N+L+ LP L LE L L+G
Sbjct: 95 GLPRLQDLEITGGAFSNLSSNIFSNLASLVKFTLNFNKLEALPEGLFGHMDALESLQLQG 154
Query: 727 NRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWA 906
N+LQ L P L+ L L N L L F L L+ L LSNN L S+P+G++
Sbjct: 155 NQLQTLPRHLFQPLRHLKTLNLAQNLLAQLPEELFHPLGSLETLRLSNNVLASLPKGVFG 214
Query: 907 SLGKAAGNMKVGFEISGNP 963
L G IS P
Sbjct: 215 KLSSLQELFLDGNSISELP 233
>ref|XP_003358805.1| PREDICTED: leucine-rich repeat-containing protein 15-like [Sus
scrofa].
Length = 581
Score = 114 bits (285), Expect = 1e-25
Identities = 74/235 (31%), Positives = 109/235 (46%)
Frame = +1
Query: 301 LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVS 480
L+ +P G+ NLQEL L NQ+ L L+ L L+ N + +LPPG+F
Sbjct: 209 LSDLPMGCFDGLGNLQELALQQNQIGMLPPGLFHNNRNLQRLYLSNNHISQLPPGIFMQL 268
Query: 481 AALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQ 660
L+ L L N L L + LR L L N + +LP + ++ L +L L NQ
Sbjct: 269 PQLNRLTLFGNSLKELSPGIFGPMHNLRELWLYDNHITSLPDNVFSSLRQLQVLILSRNQ 328
Query: 661 LQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGL 840
+ + PD G ++L+ L L N LQ L+ L+ + L NN+L L F +
Sbjct: 329 ISYISPDAFNGLVELQELSLHTNALQELDGNVFRMLTNLQNISLQNNRLRQLPGNIFANV 388
Query: 841 QVLDMLDLSNNSLTSVPEGLWASLGKAAGNMKVGFEISGNPWICDQKLNDLYRWL 1005
L + L NN L ++P G++ LGK + NPW CD + L+ WL
Sbjct: 389 NDLMTIQLQNNQLENLPLGIFDHLGKLC-----ELRLYDNPWRCDSDILPLHNWL 438
Score = 97.1 bits (240), Expect = 2e-20
Identities = 70/212 (33%), Positives = 99/212 (46%)
Frame = +1
Query: 277 YLATEFFNLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRL 456
YL+ L +P + QG+ NL+ L LS+NQL + LK L L N L+ +
Sbjct: 105 YLSLANNKLQVLPVGLFQGLDNLESLLLSSNQLVQIQPAHFSQFSNLKELQLHGNHLEYI 164
Query: 457 PPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLH 636
P G+F L L L +N L L + L L+ L L N+L LP +L
Sbjct: 165 PDGVFDHLVGLTKLNLGKNSLTHLSPRVFQRLGNLQVLRLYENRLSDLPMGCFDGLGNLQ 224
Query: 637 ILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTL 816
L L NQ+ LPP L L+ L+L N + L G P+L L L N L L
Sbjct: 225 ELALQQNQIGMLPPGLFHNNRNLQRLYLSNNHISQLPPGIFMQLPQLNRLTLFGNSLKEL 284
Query: 817 AAGAFRGLQVLDMLDLSNNSLTSVPEGLWASL 912
+ G F + L L L +N +TS+P+ +++SL
Sbjct: 285 SPGIFGPMHNLRELWLYDNHITSLPDNVFSSL 316
Score = 85.1 bits (209), Expect = 7e-17
Identities = 69/244 (28%), Positives = 107/244 (43%)
Frame = +1
Query: 181 PNACLVFHSSNGSSISCQPPAKFPHYLPADTIYLATEFFNLTQMPADILQGIPNLQELHL 360
P+ C +S I + A P LP + + L ++T++ I L L +
Sbjct: 26 PSECTCSRASQVECIGARIVA-VPTPLPWNAMSLQILNTHITELNESPFLNISALIALRI 84
Query: 361 SNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASW 540
N+L + + L+ L L N L+ LP GLF+ L +L+L N+L + +
Sbjct: 85 EKNELSHIMPGAFRNLGSLRYLSLANNKLQVLPVGLFQGLDNLESLLLSSNQLVQIQPAH 144
Query: 541 LRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHL 720
L+ L L GN L +P + + L L+LG N L L P + + L+ L L
Sbjct: 145 FSQFSNLKELQLHGNHLEYIPDGVFDHLVGLTKLNLGKNSLTHLSPRVFQRLGNLQVLRL 204
Query: 721 EGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGL 900
NRL L G L+ L L N++ L G F + L L LSNN ++ +P G+
Sbjct: 205 YENRLSDLPMGCFDGLGNLQELALQQNQIGMLPPGLFHNNRNLQRLYLSNNHISQLPPGI 264
Query: 901 WASL 912
+ L
Sbjct: 265 FMQL 268
Score = 78.6 bits (192), Expect = 7e-15
Identities = 60/213 (28%), Positives = 98/213 (46%)
Frame = +1
Query: 274 IYLATEFFNLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKR 453
I L E L+ + + + +L+ L L+NN+L+ L + L+ L L+ N L +
Sbjct: 80 IALRIEKNELSHIMPGAFRNLGSLRYLSLANNKLQVLPVGLFQGLDNLESLLLSSNQLVQ 139
Query: 454 LPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDL 633
+ P F + L L L N L+ + L L L+L N L L ++ +L
Sbjct: 140 IQPAHFSQFSNLKELQLHGNHLEYIPDGVFDHLVGLTKLNLGKNSLTHLSPRVFQRLGNL 199
Query: 634 HILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTT 813
+L L N+L LP G L+ L L+ N++ +L G L+ L+L+NN ++
Sbjct: 200 QVLRLYENRLSDLPMGCFDGLGNLQELALQQNQIGMLPPGLFHNNRNLQRLYLSNNHISQ 259
Query: 814 LAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASL 912
L G F L L+ L L NSL + G++ +
Sbjct: 260 LPPGIFMQLPQLNRLTLFGNSLKELSPGIFGPM 292
Score = 70.1 bits (170), Expect = 2e-12
Identities = 55/192 (28%), Positives = 81/192 (42%)
Frame = +1
Query: 340 NLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRL 519
N L + N + +L+ L + L L + +N L + PG F
Sbjct: 54 NAMSLQILNTHITELNESPFLNISALIALRIEKNELSHIMPGAF---------------- 97
Query: 520 DILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPL 699
R L +LR+L L+ N+L+ LP L +L L L +NQL + P
Sbjct: 98 --------RNLGSLRYLSLANNKLQVLPVGLFQGLDNLESLLLSSNQLVQIQPAHFSQFS 149
Query: 700 KLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSL 879
L+ L L GN L+ + +G L L L N LT L+ F+ L L +L L N L
Sbjct: 150 NLKELQLHGNHLEYIPDGVFDHLVGLTKLNLGKNSLTHLSPRVFQRLGNLQVLRLYENRL 209
Query: 880 TSVPEGLWASLG 915
+ +P G + LG
Sbjct: 210 SDLPMGCFDGLG 221
>ref|NP_001041651.1| insulin-like growth factor-binding protein complex acid labile
subunit [Sus scrofa].
Length = 606
Score = 109 bits (272), Expect = 3e-24
Identities = 73/207 (35%), Positives = 108/207 (52%)
Frame = +1
Query: 298 NLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKV 477
+L +P G+ NL+EL L+ N+L L + +L+ LDL+RNAL+ + +F
Sbjct: 181 SLAVLPDTAFHGLANLRELVLAGNKLTYLQPALFCGLGELRELDLSRNALRSVKANVFVK 240
Query: 478 SAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNN 657
L L L N L + G+KALR LDLS N++ L LH+L L +N
Sbjct: 241 LPKLQKLYLDHNLLAAVAPGAFLGMKALRWLDLSHNRVGGLLEDTFPGLLGLHVLRLAHN 300
Query: 658 QLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRG 837
L +L P + LE L L NRL+ L E +L L LN+N++ + AGAF G
Sbjct: 301 ALASLRPRTFKDLHFLEELQLGHNRLRQLPEKAFEGLGQLEVLALNDNQIQEIKAGAFLG 360
Query: 838 LQVLDMLDLSNNSLTSVPEGLWASLGK 918
L + +++LS N L ++PE ++ LGK
Sbjct: 361 LFNVAVMNLSGNCLRNLPEQVFRGLGK 387
Score = 104 bits (259), Expect = 1e-22
Identities = 78/235 (33%), Positives = 114/235 (48%), Gaps = 4/235 (1%)
Frame = +1
Query: 301 LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVS 480
L Q+P +G+ L+ L L++NQ++++ A L + + V++L+ N L+ LP +F+
Sbjct: 326 LRQLPEKAFEGLGQLEVLALNDNQIQEIKAGAFLGLFNVAVMNLSGNCLRNLPEQVFRGL 385
Query: 481 AALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQ 660
LH+L L+ + L + GL LR L L N L + + L +L LDL N+
Sbjct: 386 GKLHSLHLEHSCLGRVGLHTFAGLSGLRRLFLKDNGLEAIDEQSLWGLAELLELDLTANR 445
Query: 661 LQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGL 840
L LP L +G KLE+L L NRL L L P + +L +++N+L L L
Sbjct: 446 LTHLPGRLFQGLGKLEYLLLSRNRLSALPADALGPLQRTFWLDVSHNRLQALPEAVLAPL 505
Query: 841 QVLDMLDLSNNSL-TSVPEGLWASLGKAAGNMKVGFE---ISGNPWICDQKLNDL 993
L L L NNSL T VP+ L G E + GNPW C L L
Sbjct: 506 GQLRYLSLRNNSLRTFVPQPL-------------GLERLWLEGNPWDCGCPLRAL 547
Score = 101 bits (251), Expect = 1e-21
Identities = 79/238 (33%), Positives = 114/238 (47%)
Frame = +1
Query: 175 PDPNACLVFHSSNGSSISCQPPAKFPHYLPADTIYLATEFFNLTQMPADILQGIPNLQEL 354
PD L S+N SS+ P F + + +L + L + L G+ NL L
Sbjct: 73 PDAARALWLDSNNFSSV---PAGAFRNL--SSLGFLNLQGSGLASLEPQALLGLQNLYHL 127
Query: 355 HLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDA 534
HL NQL L+A L P L L L N L R+ GLF+ L L L N L +L
Sbjct: 128 HLERNQLRSLAAHTFLHTPGLASLGLHNNLLSRVEEGLFQGLTNLWDLNLGWNSLAVLPD 187
Query: 535 SWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWL 714
+ GL LR L L+GN+L L L +L LDL N L+++ ++ KL+ L
Sbjct: 188 TAFHGLANLRELVLAGNKLTYLQPALFCGLGELRELDLSRNALRSVKANVFVKLPKLQKL 247
Query: 715 HLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSV 888
+L+ N L + G LR+L L++N++ L F GL L +L L++N+L S+
Sbjct: 248 YLDHNLLAAVAPGAFLGMKALRWLDLSHNRVGGLLEDTFPGLLGLHVLRLAHNALASL 305
Score = 95.1 bits (235), Expect = 7e-20
Identities = 79/268 (29%), Positives = 121/268 (45%), Gaps = 4/268 (1%)
Frame = +1
Query: 121 CRIXXXXXXXXXSAKGVTPDPNACLVFHS--SNGSSISCQPP--AKFPHYLPADTIYLAT 288
C + A+G+ P P AC H ++ S+ C + P +P L
Sbjct: 23 CTLAGTEPGAPSDAEGL-PCPAACSCGHDDYTDELSVFCSSRNLTQLPDGIPDAARALWL 81
Query: 289 EFFNLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGL 468
+ N + +PA + + +L L+L + L L + LL + L L L RN L+ L
Sbjct: 82 DSNNFSSVPAGAFRNLSSLGFLNLQGSGLASLEPQALLGLQNLYHLHLERNQLRSLAAHT 141
Query: 469 FKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDL 648
F + L +L L N L ++ +GL L L+L N L LP +L L L
Sbjct: 142 FLHTPGLASLGLHNNLLSRVEEGLFQGLTNLWDLNLGWNSLAVLPDTAFHGLANLRELVL 201
Query: 649 GNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGA 828
N+L L P L G +L L L N L+ ++ PKL+ L+L++N L +A GA
Sbjct: 202 AGNKLTYLQPALFCGLGELRELDLSRNALRSVKANVFVKLPKLQKLYLDHNLLAAVAPGA 261
Query: 829 FRGLQVLDMLDLSNNSLTSVPEGLWASL 912
F G++ L LDLS+N + + E + L
Sbjct: 262 FLGMKALRWLDLSHNRVGGLLEDTFPGL 289
Score = 87.8 bits (216), Expect = 1e-17
Identities = 73/230 (31%), Positives = 100/230 (43%), Gaps = 24/230 (10%)
Frame = +1
Query: 301 LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVS 480
L + A++ +P LQ+L+L +N L ++ L + L+ LDL+ N + L F
Sbjct: 230 LRSVKANVFVKLPKLQKLYLDHNLLAAVAPGAFLGMKALRWLDLSHNRVGGLLEDTFPGL 289
Query: 481 AALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQ 660
LH L L N L L + L L L L N+LR LP K L +L L +NQ
Sbjct: 290 LGLHVLRLAHNALASLRPRTFKDLHFLEELQLGHNRLRQLPEKAFEGLGQLEVLALNDNQ 349
Query: 661 LQ------------------------TLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQ 768
+Q LP + RG KL LHLE + L + A
Sbjct: 350 IQEIKAGAFLGLFNVAVMNLSGNCLRNLPEQVFRGLGKLHSLHLEHSCLGRVGLHTFAGL 409
Query: 769 PKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASLGK 918
LR LFL +N L + + GL L LDL+ N LT +P L+ LGK
Sbjct: 410 SGLRRLFLKDNGLEAIDEQSLWGLAELLELDLTANRLTHLPGRLFQGLGK 459
Score = 76.3 bits (186), Expect = 3e-14
Identities = 61/167 (36%), Positives = 79/167 (47%)
Frame = +1
Query: 418 KVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRT 597
+ L L N +P G F+ ++L L L+ + L L+ L GL+ L HL L NQLR+
Sbjct: 77 RALWLDSNNFSSVPAGAFRNLSSLGFLNLQGSGLASLEPQALLGLQNLYHLHLERNQLRS 136
Query: 598 LPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKL 777
L + L L L NN L + L +G L L+L N L VL + L
Sbjct: 137 LAAHTFLHTPGLASLGLHNNLLSRVEEGLFQGLTNLWDLNLGWNSLAVLPDTAFHGLANL 196
Query: 778 RYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASLGK 918
R L L NKLT L F GL L LDLS N+L SV ++ L K
Sbjct: 197 RELVLAGNKLTYLQPALFCGLGELRELDLSRNALRSVKANVFVKLPK 243
Score = 62.8 bits (151), Expect = 4e-10
Identities = 56/169 (33%), Positives = 75/169 (44%)
Frame = +1
Query: 412 QLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQL 591
+L V +RN L +LP G + A L L N + A R L +L L+L G+ L
Sbjct: 55 ELSVFCSSRN-LTQLPDG---IPDAARALWLDSNNFSSVPAGAFRNLSSLGFLNLQGSGL 110
Query: 592 RTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQP 771
+L + L +L+ L L NQL++L L L L N L +EEG
Sbjct: 111 ASLEPQALLGLQNLYHLHLERNQLRSLAAHTFLHTPGLASLGLHNNLLSRVEEGLFQGLT 170
Query: 772 KLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASLGK 918
L L L N L L AF GL L L L+ N LT + L+ LG+
Sbjct: 171 NLWDLNLGWNSLAVLPDTAFHGLANLRELVLAGNKLTYLQPALFCGLGE 219
>ref|XP_003132649.1| PREDICTED: platelet glycoprotein V-like [Sus scrofa].
Length = 569
Score = 106 bits (264), Expect = 3e-23
Identities = 81/246 (32%), Positives = 111/246 (45%), Gaps = 29/246 (11%)
Frame = +1
Query: 268 DTIYLATEFF----NLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLT 435
D + L + F L + ++ Q + +LQEL L+ NQ L A + LK+LDL+
Sbjct: 119 DKLVLLEQLFLDGNELKSLDQNMFQKLVSLQELFLNQNQFAFLPASLFAHLENLKLLDLS 178
Query: 436 RNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLL 615
N L LP GLF L L+L N+L LD+ L L+AL+ L L N +R++
Sbjct: 179 GNNLTHLPKGLFGAQVKLEKLLLHSNQLVSLDSGLLDSLRALKELQLDSNHIRSVAPGAF 238
Query: 616 ANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLN 795
L L L N+L+ LP L L +L L N L+ L E L+ L+LN
Sbjct: 239 DRLRSLSSLTLARNRLEGLPSALFLHSRSLTFLTLFENPLEELPEVLFGEMGGLQELWLN 298
Query: 796 NNKLTTLAAG-------------------------AFRGLQVLDMLDLSNNSLTSVPEGL 900
+L TL A AFRGL L +L LS+N L S+P GL
Sbjct: 299 GTQLLTLPAAVFRNLSGLWVLRVTLSPRLSALPEDAFRGLGELRVLALSSNGLASLPAGL 358
Query: 901 WASLGK 918
LG+
Sbjct: 359 LRGLGR 364
Score = 103 bits (257), Expect = 2e-22
Identities = 79/266 (29%), Positives = 124/266 (46%), Gaps = 1/266 (0%)
Frame = +1
Query: 211 NGSSISCQPPAKFPHYLPADTIYLATEFFNLTQMPADILQGIPNLQELHLSNNQLEDLSA 390
+G++++ P F + + + L + L + + +L + L+EL L +N + ++
Sbjct: 178 SGNNLTHLPKGLFGAQVKLEKLLLHSN--QLVSLDSGLLDSLRALKELQLDSNHIRSVAP 235
Query: 391 KFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHL 570
+ L L L RN L+ LP LF S +L L L EN L+ L + L+ L
Sbjct: 236 GAFDRLRSLSSLTLARNRLEGLPSALFLHSRSLTFLTLFENPLEELPEVLFGEMGGLQEL 295
Query: 571 DLSGNQLRTLPRKLLANFTDLHILDLG-NNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLE 747
L+G QL TLP + N + L +L + + +L LP D RG +L L L N L L
Sbjct: 296 WLNGTQLLTLPAAVFRNLSGLWVLRVTLSPRLSALPEDAFRGLGELRVLALSSNGLASLP 355
Query: 748 EGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASLGKAAG 927
G L +LR++ L N+L TL F L L + L +N L ++P ++ L + A
Sbjct: 356 AGLLRGLGRLRHVSLRRNRLRTLPRALFHNLSSLAEVQLDHNQLETLPGDMFEGLPQLAE 415
Query: 928 NMKVGFEISGNPWICDQKLNDLYRWL 1005
+ + NPW CD L WL
Sbjct: 416 VL-----LGHNPWRCDCGLRPFLAWL 436
Score = 101 bits (251), Expect = 1e-21
Identities = 68/191 (35%), Positives = 99/191 (51%)
Frame = +1
Query: 331 GIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKE 510
G+ LQ L LS++ + ++ L + +LK L L+RN + LP L L L L
Sbjct: 72 GMTVLQRLMLSDSHVTAIAPGTLNDLIKLKTLRLSRNKITHLPGALLDKLVLLEQLFLDG 131
Query: 511 NRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLR 690
N L LD + + L +L+ L L+ NQ LP L A+ +L +LDL N L LP L
Sbjct: 132 NELKSLDQNMFQKLVSLQELFLNQNQFAFLPASLFAHLENLKLLDLSGNNLTHLPKGLFG 191
Query: 691 GPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSN 870
+KLE L L N+L L+ G L L+ L L++N + ++A GAF L+ L L L+
Sbjct: 192 AQVKLEKLLLHSNQLVSLDSGLLDSLRALKELQLDSNHIRSVAPGAFDRLRSLSSLTLAR 251
Query: 871 NSLTSVPEGLW 903
N L +P L+
Sbjct: 252 NRLEGLPSALF 262
Score = 85.1 bits (209), Expect = 7e-17
Identities = 66/206 (32%), Positives = 96/206 (46%)
Frame = +1
Query: 298 NLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKV 477
++T + L + L+ L LS N++ L L + L+ L L N LK L +F+
Sbjct: 85 HVTAIAPGTLNDLIKLKTLRLSRNKITHLPGALLDKLVLLEQLFLDGNELKSLDQNMFQK 144
Query: 478 SAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNN 657
+L L L +N+ L AS L+ L+ LDLSGN L LP+ L L L L +N
Sbjct: 145 LVSLQELFLNQNQFAFLPASLFAHLENLKLLDLSGNNLTHLPKGLFGAQVKLEKLLLHSN 204
Query: 658 QLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRG 837
QL +L LL L+ L L+ N ++ + G L L L N+L L + F
Sbjct: 205 QLVSLDSGLLDSLRALKELQLDSNHIRSVAPGAFDRLRSLSSLTLARNRLEGLPSALFLH 264
Query: 838 LQVLDMLDLSNNSLTSVPEGLWASLG 915
+ L L L N L +PE L+ +G
Sbjct: 265 SRSLTFLTLFENPLEELPEVLFGEMG 290
Score = 71.2 bits (173), Expect = 1e-12
Identities = 47/140 (33%), Positives = 74/140 (52%)
Frame = +1
Query: 490 HTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQT 669
H L+ + R + + S+ G+ L+ L LS + + + L + L L L N++
Sbjct: 54 HLLLFRMGRGALQNHSF-SGMTVLQRLMLSDSHVTAIAPGTLNDLIKLKTLRLSRNKITH 112
Query: 670 LPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVL 849
LP LL + LE L L+GN L+ L++ L+ LFLN N+ L A F L+ L
Sbjct: 113 LPGALLDKLVLLEQLFLDGNELKSLDQNMFQKLVSLQELFLNQNQFAFLPASLFAHLENL 172
Query: 850 DMLDLSNNSLTSVPEGLWAS 909
+LDLS N+LT +P+GL+ +
Sbjct: 173 KLLDLSGNNLTHLPKGLFGA 192
>ref|XP_003123408.1| PREDICTED: podocan-like protein 1-like [Sus scrofa].
Length = 593
Score = 100 bits (250), Expect = 1e-21
Identities = 77/216 (35%), Positives = 112/216 (51%), Gaps = 6/216 (2%)
Frame = +1
Query: 244 KFPHYLPADTIYLATEFFNLTQMPADILQGIPNLQELHLSNNQLED--LSAKFLLPVPQL 417
+ P LP L ++T + A L P L EL+L+ N L + + + L
Sbjct: 363 RMPQALPRHLRSLVLPHNHVTMLGARDLAATPGLAELNLAYNHLASARVHRRAFRRLRAL 422
Query: 418 KVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRT 597
+ LDL N L +LP GL A+L+TL L+ N+L +L+ L GL L+ L L+ N+LR
Sbjct: 423 RSLDLAGNQLTQLPAGL---PASLNTLRLQRNQLRVLEPEPLAGLDQLQELSLAHNRLRV 479
Query: 598 --LPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQP 771
+ L +LDL +N+L +PPDL P LE LHL+GNR+ + P
Sbjct: 480 GDIGPGTWHELPALQVLDLSHNELSFVPPDL---PEALEELHLQGNRISHVGPEAFISTP 536
Query: 772 KLRYLFLNNNKL--TTLAAGAFRGLQVLDMLDLSNN 873
+LR LFL N+L T+++ AF GL L M+D + N
Sbjct: 537 RLRALFLRANRLHMTSISPEAFLGLPHLRMVDTTGN 572
Score = 98.6 bits (244), Expect = 6e-21
Identities = 86/237 (36%), Positives = 117/237 (49%), Gaps = 6/237 (2%)
Frame = +1
Query: 220 SISCQPPAKFPHYLPADTIYLATEFFNLTQMPADILQGIPNLQELHLSNNQLED--LSAK 393
S+S + P LP L + ++++P L +L+EL+L +NQL D L A
Sbjct: 213 SLSSNRLSYVPPSLPPSLERLHLQNNIISKVPRGALSRQTHLRELYLQHNQLTDSGLDAT 272
Query: 394 FLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLD 573
+ +L+ LDL+ N L +P GL A LH L NR+ ++A+ LRG++ LR+L
Sbjct: 273 TFSKLHRLEYLDLSHNQLATVPAGLPHTLAVLH---LGRNRIRWVEAARLRGMRGLRYLL 329
Query: 574 LSGNQLRT--LPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLE 747
L NQL LP + L LH L L N L +P L P L L L N + +L
Sbjct: 330 LQHNQLGATGLPARALRPLRGLHTLHLYGNGLDRMPQAL---PRHLRSLVLPHNHVTMLG 386
Query: 748 EGFLAPQPKLRYLFLNNNKLTTLAAG--AFRGLQVLDMLDLSNNSLTSVPEGLWASL 912
LA P L L L N L + AFR L+ L LDL+ N LT +P GL ASL
Sbjct: 387 ARDLAATPGLAELNLAYNHLASARVHRRAFRRLRALRSLDLAGNQLTQLPAGLPASL 443
Score = 72.4 bits (176), Expect = 5e-13
Identities = 76/261 (29%), Positives = 111/261 (42%), Gaps = 51/261 (19%)
Frame = +1
Query: 271 TIYLATEFFNLTQMPADILQGIPNLQELHLSNNQLE-------------DLSAKFLLPV- 408
T+ L + +P + + + LQ +++++N+L DL+A + +
Sbjct: 114 TLNLHNNLISSEGLPDEAFESLTQLQHIYVAHNRLSVAPQFLPRSLRVADLAANEVTEIF 173
Query: 409 -------PQLKVLDLTRNALKR--LPPGLFKVSAALHTLVLKENRLDILDASWLRGLKAL 561
P L+ + L N L LPP F+ S A+ TL L NRL + S +L
Sbjct: 174 PLTFGEKPALRSVYLHNNQLSNAGLPPDAFRGSEAVATLSLSSNRLSYVPPSL---PPSL 230
Query: 562 RHLDLSGNQLRTLPRKLLA-----------------------NFTDLH---ILDLGNNQL 663
L L N + +PR L+ F+ LH LDL +NQL
Sbjct: 231 ERLHLQNNIISKVPRGALSRQTHLRELYLQHNQLTDSGLDATTFSKLHRLEYLDLSHNQL 290
Query: 664 QTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKL--TTLAAGAFRG 837
T+P L P L LHL NR++ +E L LRYL L +N+L T L A A R
Sbjct: 291 ATVPAGL---PHTLAVLHLGRNRIRWVEAARLRGMRGLRYLLLQHNQLGATGLPARALRP 347
Query: 838 LQVLDMLDLSNNSLTSVPEGL 900
L+ L L L N L +P+ L
Sbjct: 348 LRGLHTLHLYGNGLDRMPQAL 368
Score = 61.6 bits (148), Expect = 8e-10
Identities = 45/145 (31%), Positives = 70/145 (48%), Gaps = 25/145 (17%)
Frame = +1
Query: 553 KALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQT--LPPDLLRGPLKLEWLHLEG 726
+A +HL L NQL+ LP L+ +DL L+L NN + + LP + +L+ +++
Sbjct: 86 RAAQHLSLQNNQLQELPYNELSRLSDLRTLNLHNNLISSEGLPDEAFESLTQLQHIYVAH 145
Query: 727 NRLQVLEEGF---------------------LAPQPKLRYLFLNNNKLTT--LAAGAFRG 837
NRL V + +P LR ++L+NN+L+ L AFRG
Sbjct: 146 NRLSVAPQFLPRSLRVADLAANEVTEIFPLTFGEKPALRSVYLHNNQLSNAGLPPDAFRG 205
Query: 838 LQVLDMLDLSNNSLTSVPEGLWASL 912
+ + L LS+N L+ VP L SL
Sbjct: 206 SEAVATLSLSSNRLSYVPPSLPPSL 230
>ref|XP_003125026.2| PREDICTED: leucine-rich repeat transmembrane neuronal protein 4
isoform 2 [Sus scrofa].
Length = 590
Score = 100 bits (248), Expect = 2e-21
Identities = 83/298 (27%), Positives = 130/298 (43%), Gaps = 27/298 (9%)
Frame = +1
Query: 274 IYLATEFFNLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKR 453
I+L + ++ + D QGI L+EL LS+N++ L K PVP L+ LDL+ N L+
Sbjct: 88 IWLYLDHNYISSVDEDAFQGIRRLKELILSSNKITYLHNKTFHPVPNLRSLDLSYNKLQT 147
Query: 454 LPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDL 633
L FK GL+ L L L N L+T+P ++ + +L
Sbjct: 148 LQSEQFK------------------------GLRKLIILHLRSNSLKTVPIRVFQDCRNL 183
Query: 634 HILDLGNNQLQTLPPDLLRGPLKLEWLHLE------------------------GNRLQV 741
LDLG N+L++L + G LKL+ LHLE NR++
Sbjct: 184 DFLDLGYNRLRSLSRNAFAGLLKLKELHLEHNQFSKINFAHFPRLFNLRSIYLQWNRIRS 243
Query: 742 LEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPE---GLWASL 912
+ +G L L L+ N + + G F+ L L L+L +N LT++ + W SL
Sbjct: 244 ISQGLTWTWSSLHNLDLSGNDIQGIEPGTFKCLPNLQKLNLDSNKLTNISQETVNAWISL 303
Query: 913 GKAAGNMKVGFEISGNPWICDQKLNDLYRWLCGQRKTRCFFQNNTSLCWPQKALGGAK 1086
+ +SGN W C + + L+ WL + + +T +C K + G K
Sbjct: 304 --------ISITLSGNMWECTRSICPLFYWLKNFKGNK----ESTMICAGPKHIQGEK 349
>ref|XP_003125025.2| PREDICTED: leucine-rich repeat transmembrane neuronal protein 4
isoform 1 [Sus scrofa].
Length = 590
Score = 100 bits (248), Expect = 2e-21
Identities = 83/298 (27%), Positives = 130/298 (43%), Gaps = 27/298 (9%)
Frame = +1
Query: 274 IYLATEFFNLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKR 453
I+L + ++ + D QGI L+EL LS+N++ L K PVP L+ LDL+ N L+
Sbjct: 88 IWLYLDHNYISSVDEDAFQGIRRLKELILSSNKITYLHNKTFHPVPNLRSLDLSYNKLQT 147
Query: 454 LPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDL 633
L FK GL+ L L L N L+T+P ++ + +L
Sbjct: 148 LQSEQFK------------------------GLRKLIILHLRSNSLKTVPIRVFQDCRNL 183
Query: 634 HILDLGNNQLQTLPPDLLRGPLKLEWLHLE------------------------GNRLQV 741
LDLG N+L++L + G LKL+ LHLE NR++
Sbjct: 184 DFLDLGYNRLRSLSRNAFAGLLKLKELHLEHNQFSKINFAHFPRLFNLRSIYLQWNRIRS 243
Query: 742 LEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPE---GLWASL 912
+ +G L L L+ N + + G F+ L L L+L +N LT++ + W SL
Sbjct: 244 ISQGLTWTWSSLHNLDLSGNDIQGIEPGTFKCLPNLQKLNLDSNKLTNISQETVNAWISL 303
Query: 913 GKAAGNMKVGFEISGNPWICDQKLNDLYRWLCGQRKTRCFFQNNTSLCWPQKALGGAK 1086
+ +SGN W C + + L+ WL + + +T +C K + G K
Sbjct: 304 --------ISITLSGNMWECTRSICPLFYWLKNFKGNK----ESTMICAGPKHIQGEK 349
>ref|XP_001924493.1| PREDICTED: leucine-rich repeat transmembrane neuronal protein 3 [Sus
scrofa].
Length = 581
Score = 99.8 bits (247), Expect = 3e-21
Identities = 81/319 (25%), Positives = 142/319 (44%), Gaps = 30/319 (9%)
Frame = +1
Query: 214 GSSISC--QPPAKFPHYLPADTIYLATEFFNLTQMPADILQGIPNLQELHLSNNQLEDLS 387
G + C Q + P + A + L+ + +L ++ + +G+ L L+L +N + ++
Sbjct: 42 GKMVYCESQKLQEIPSSISAGCLGLSLRYNSLQKLKYNQFKGLNQLTWLYLDHNHISNID 101
Query: 388 AKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRH 567
+ +LK L L+ N + F+ L L L N+L L + RGL+ L
Sbjct: 102 ENAFNGIRRLKELILSSNRISYFLNNTFRPVTNLRNLDLSYNQLHSLGSEQFRGLRKLLS 161
Query: 568 LDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLE 747
L L N LRT+P ++ + +L +LDLG N++++L ++ G ++L+ LHLE N+ L
Sbjct: 162 LHLRSNSLRTIPVRIFQDCRNLELLDLGYNRIRSLARNVFAGMIRLKELHLEHNQFSKLN 221
Query: 748 EGFLAPQPKLRYLFLNNNKLTTLA---AGAFRGLQVLDM--------------------- 855
L+ L+L NK++ + + + LQ LD+
Sbjct: 222 LALFPRLVSLQNLYLQWNKISVIGQTMSWTWSSLQRLDLSGNEIEAFSGPSVFQCVPNLQ 281
Query: 856 -LDLSNNSLTSVPEGL---WASLGKAAGNMKVGFEISGNPWICDQKLNDLYRWLCGQRKT 1023
L+L +N LT + + + W SL ++GN W C + + L WL K+
Sbjct: 282 RLNLDSNKLTFIGQEILDSWISLN--------DISLAGNIWECSRNICSLVNWL----KS 329
Query: 1024 RCFFQNNTSLCWPQKALGG 1080
+ NT +C K L G
Sbjct: 330 FKGLRENTIICASPKELQG 348
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 32,056,233
Number of extensions: 1017728
Number of successful extensions: 6473
Number of sequences better than 1.0e-05: 153
Number of HSP's gapped: 5526
Number of HSP's successfully gapped: 447
Length of query: 402
Length of database: 11,343,932
Length adjustment: 101
Effective length of query: 301
Effective length of database: 8,829,335
Effective search space: 2657629835
Effective search space used: 2657629835
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-001980
(1207 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr02 1834 0.0
>Sscrofa_Chr02
|| Length = 162569375
Score = 1834 bits (925), Expect = 0.0
Identities = 965/973 (99%), Gaps = 4/973 (0%)
Strand = Plus / Plus
Query: 94 agcccagggagctgggaaccccatctctgtagaatcctcttcctgctgctgctatttgtg 153
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74793951 agcccagggagctgggaaccccatctctgtagaatcctcttcctgctgctgctatttgtg 74794010
Query: 154 gtctcagccaagggagtcaccccagatcccaacgcctgcctggtattccactcgagtaat 213
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74794011 gtctcagccaagggagtcaccccagatcccaacgcctgcctggtattccactcgagtaat 74794070
Query: 214 ggcagctccatttcctgccaaccacctgccaaattcccccactatctcccagctgacacc 273
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74794071 ggcagctccatttcctgccaaccacctgccaaattcccccactatctcccagctgacacc 74794130
Query: 274 atttacctggccacagagttcttcaacctgactcagatgcctgctgacatcctccagggc 333
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74794131 atttacctggccacagagttcttcaacctgactcagatgcctgctgacatcctccagggc 74794190
Query: 334 atccctaacctccaggaactgcacctttccaacaaccagctggaggacctttcagccaag 393
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74794191 atccctaacctccaggaactgcacctttccaacaaccagctggaggacctttcagccaag 74794250
Query: 394 ttcctgctgcctgtgcctcagctaaaggtgctcgatctgacccgcaacgccctgaaacgc 453
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74794251 ttcctgctgcctgtgcctcagctaaaggtgctcgatctgacccgcaacgccctgaaacgc 74794310
Query: 454 ctgccccctggcctcttcaaggtctcggctgccctccacaccctggtgctgaaggaaaac 513
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74794311 ctgccccctggcctcttcaaggtctcggctgccctccacaccctggtgctgaaggaaaac 74794370
Query: 514 cggctagacattctggacgcctcgtggctacgtggcctgaaagccctcaggcatctggac 573
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74794371 cggctagacattctggacgcctcgtggctacgtggcctgaaagccctcaggcatctggac 74794430
Query: 574 ttgtcagggaaccagctccggacactgccccgcaagctgctggccaacttcactgacctg 633
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74794431 ttgtcagggaaccagctccggacactgccccgcaagctgctggccaacttcactgacctg 74794490
Query: 634 cacatccttgaccttggcaataaccagctgcagactttgccccctgacctcctgaggggc 693
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74794491 cacatccttgaccttggcaataaccagctgcagactttgccccctgacctcctgaggggc 74794550
Query: 694 cccttgaagttggaatggctgcaccttgagggcaatagattgcaggtgctcgaagagggc 753
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74794551 cccttgaagttggaatggctgcaccttgagggcaatagattgcaggtgctcgaagagggc 74794610
Query: 754 tttctggcgccccagccaaaactgcgctacctttttctaaacaacaacaagctgaccacg 813
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74794611 tttctggcgccccagccaaaactgcgctacctttttctaaacaacaacaagctgaccacg 74794670
Query: 814 ctggcagctggtgctttccgaggtctgcaggtgctggacatgctggacctctccaacaac 873
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74794671 ctggcagctggtgctttccgaggtctgcaggtgctggacatgctggacctctccaacaac 74794730
Query: 874 tcactgaccagtgttcccgaggggctctgggcatccttgggaaaggctgccggcaacatg 933
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74794731 tcactgaccagtgttcccgaggggctctgggcatccttgggaaaggctgccggcaacatg 74794790
Query: 934 aaagttggttttgaaatctcagggaacccctggatctgtgaccagaaactaaatgacctc 993
|| ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 74794791 aaggttggttttgacatctcagggaacccctggatctgtgaccagaaactagatgacctc 74794850
Query: 994 tatcggtggctttgtggccaacgaaagacaagatgttttttccaaaacaacacttcactg 1053
|||||||||| |||||||||||| ||||||||||| |||||||| |||||||| ||||||
Sbjct: 74794851 tatcggtggc-ttgtggccaacg-aagacaagatg-tttttccagaacaacac-tcactg 74794906
Query: 1054 tgctggccccaaa 1066
|||||||||||||
Sbjct: 74794907 tgctggccccaaa 74794919
Score = 188 bits (95), Expect = 5e-45
Identities = 95/95 (100%)
Strand = Plus / Plus
Query: 1 caggcaggtataaagccaccttgccagaccaagggagcctagatggaaaagggagaggcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74792864 caggcaggtataaagccaccttgccagaccaagggagcctagatggaaaagggagaggcc 74792923
Query: 61 accatgtcctcttggagcccagaaggaaaacagag 95
|||||||||||||||||||||||||||||||||||
Sbjct: 74792924 accatgtcctcttggagcccagaaggaaaacagag 74792958
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 36,362,073
Number of extensions: 228
Number of successful extensions: 228
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 227
Number of HSP's successfully gapped: 2
Length of query: 1207
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 1186
Effective length of database: 2,808,413,156
Effective search space: 3330778003016
Effective search space used: 3330778003016
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)