Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002009
(1047 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001015613.1| creatine kinase B-type [Bos taurus]. 625 e-179
Alignment gi|NP_777198.2| creatine kinase M-type [Bos taurus]. 524 e-149
Alignment gi|NP_776700.1| creatine kinase U-type, mitochondrial precursor... 419 e-117
Alignment gi|NP_001029828.1| creatine kinase S-type, mitochondrial precur... 409 e-114
>ref|NP_001015613.1| creatine kinase B-type [Bos taurus].
Length = 381
Score = 625 bits (1612), Expect = e-179
Identities = 298/302 (98%), Positives = 301/302 (99%)
Frame = +3
Query: 93 MPFSNSHNTLKLRFPAEDEFPDLSGHNNHMAKVLTPELYAELRAKSTPSGFTLDDVIQTG 272
MPFSNSHNTLKLRFPAEDEFPDLSGHNNHMAKVLTPELYAELRAKSTPSGFT+DDVIQTG
Sbjct: 1 MPFSNSHNTLKLRFPAEDEFPDLSGHNNHMAKVLTPELYAELRAKSTPSGFTVDDVIQTG 60
Query: 273 VDNPGHPYIMTVGCVAGDEESYDVFKELFDPIIEDRHGGYKPSDEHKTDLNPDNLQGGDD 452
VDNPGHPYIMTVGCVAGDEESYDVFKELFDPIIEDRHGGYKP+DEHKTDLNPDNLQGGDD
Sbjct: 61 VDNPGHPYIMTVGCVAGDEESYDVFKELFDPIIEDRHGGYKPTDEHKTDLNPDNLQGGDD 120
Query: 453 LDPNYVLSSRVRTGRSIRGFCLPPHCSRGERRAIEKLAVEALSSLDGDLAGRYYALKSMT 632
LDPNYVLSSRVRTGRSIRGFCLPPHCSRGERRAIEKLAVEALSSLDGDLAGRYYALKSMT
Sbjct: 121 LDPNYVLSSRVRTGRSIRGFCLPPHCSRGERRAIEKLAVEALSSLDGDLAGRYYALKSMT 180
Query: 633 EAEQQQLIDDHFLFDKPVSPLLLASGMARDWPDARGIWHNDNKTFLVWINEEDHLRVISM 812
EAEQQQLIDDHFLFDKPVSPLLLASGMARDWPDARGIWHNDNKTFLVWINEEDHLRVISM
Sbjct: 181 EAEQQQLIDDHFLFDKPVSPLLLASGMARDWPDARGIWHNDNKTFLVWINEEDHLRVISM 240
Query: 813 QKGGNMKEVFTRFLHGLTQIETLFKSKNYEFMWNPHLGYILTCPSNLGTGLRAGVHIKLP 992
QKGGNMKEVFTRF +GLTQIETLFKSKNYEFMWNPHLGYILTCPSNLGTGLRAGVHIKLP
Sbjct: 241 QKGGNMKEVFTRFCNGLTQIETLFKSKNYEFMWNPHLGYILTCPSNLGTGLRAGVHIKLP 300
Query: 993 HL 998
HL
Sbjct: 301 HL 302
>ref|NP_777198.2| creatine kinase M-type [Bos taurus].
Length = 381
Score = 524 bits (1350), Expect = e-149
Identities = 243/302 (80%), Positives = 271/302 (89%)
Frame = +3
Query: 93 MPFSNSHNTLKLRFPAEDEFPDLSGHNNHMAKVLTPELYAELRAKSTPSGFTLDDVIQTG 272
MPF N+HN KL F AE+E+PDLS HNNHMAK LT E+Y +LR K TPSGFTLDDVIQTG
Sbjct: 1 MPFGNTHNKHKLNFKAEEEYPDLSKHNNHMAKALTLEIYKKLRDKETPSGFTLDDVIQTG 60
Query: 273 VDNPGHPYIMTVGCVAGDEESYDVFKELFDPIIEDRHGGYKPSDEHKTDLNPDNLQGGDD 452
VDNPGHP+IMTVGCVAGDEESY VFK+LFDPII+DRHGG+KP+D+HKTDLN +NL+GGDD
Sbjct: 61 VDNPGHPFIMTVGCVAGDEESYTVFKDLFDPIIQDRHGGFKPTDKHKTDLNHENLKGGDD 120
Query: 453 LDPNYVLSSRVRTGRSIRGFCLPPHCSRGERRAIEKLAVEALSSLDGDLAGRYYALKSMT 632
LDPNYVLSSRVRTGRSI+G+ LPPHCSRGERRA+EKL+VEAL+SL G+ G+YY LKSMT
Sbjct: 121 LDPNYVLSSRVRTGRSIKGYALPPHCSRGERRAVEKLSVEALNSLTGEFKGKYYPLKSMT 180
Query: 633 EAEQQQLIDDHFLFDKPVSPLLLASGMARDWPDARGIWHNDNKTFLVWINEEDHLRVISM 812
E EQQQLIDDHFLFDKPVSPLLLASGMARDWPDARGIWHNDNK+FLVW+NEEDHLRVISM
Sbjct: 181 EQEQQQLIDDHFLFDKPVSPLLLASGMARDWPDARGIWHNDNKSFLVWVNEEDHLRVISM 240
Query: 813 QKGGNMKEVFTRFLHGLTQIETLFKSKNYEFMWNPHLGYILTCPSNLGTGLRAGVHIKLP 992
+KGGNMKEVF RF GL +IE +FK + FMWN HLGY+LTCPSNLGTGLR GVH+KL
Sbjct: 241 EKGGNMKEVFRRFCVGLQKIEEIFKKAGHPFMWNEHLGYVLTCPSNLGTGLRGGVHVKLA 300
Query: 993 HL 998
HL
Sbjct: 301 HL 302
>ref|NP_776700.1| creatine kinase U-type, mitochondrial precursor [Bos taurus].
Length = 416
Score = 419 bits (1076), Expect = e-117
Identities = 200/290 (68%), Positives = 233/290 (80%), Gaps = 1/290 (0%)
Frame = +3
Query: 132 FPAEDEFPDLSGHNNHMAKVLTPELYAELRAKSTPSGFTLDDVIQTGVDNPGHPYIMTVG 311
+P E+PDL HNN MA LTP +YA L K+TP+G+TLD IQTGVDNPGHP+I TVG
Sbjct: 47 YPPSAEYPDLRKHNNCMASHLTPAVYARLCDKTTPTGWTLDQCIQTGVDNPGHPFIKTVG 106
Query: 312 CVAGDEESYDVFKELFDPIIEDRHGGYKPSD-EHKTDLNPDNLQGGDDLDPNYVLSSRVR 488
VAGDEE+Y+VF ELFDP+I++RH GY P +H TDL+ ++ G D YVLSSRVR
Sbjct: 107 MVAGDEETYEVFAELFDPVIQERHNGYDPRTMKHTTDLDASKIRSGY-FDERYVLSSRVR 165
Query: 489 TGRSIRGFCLPPHCSRGERRAIEKLAVEALSSLDGDLAGRYYALKSMTEAEQQQLIDDHF 668
TGRSIRG LPP C+R ERR +E++ V+ALS L GDLAGRYY L MTEAEQQQLIDDHF
Sbjct: 166 TGRSIRGLSLPPACTRAERREVERVVVDALSGLKGDLAGRYYRLSEMTEAEQQQLIDDHF 225
Query: 669 LFDKPVSPLLLASGMARDWPDARGIWHNDNKTFLVWINEEDHLRVISMQKGGNMKEVFTR 848
LFDKPVSPLL A+GMARDWPDARGIWHN+ K+FL+W+NEEDH RVISM+KGGNMK+VF R
Sbjct: 226 LFDKPVSPLLTAAGMARDWPDARGIWHNNEKSFLIWVNEEDHTRVISMEKGGNMKKVFER 285
Query: 849 FLHGLTQIETLFKSKNYEFMWNPHLGYILTCPSNLGTGLRAGVHIKLPHL 998
F GL ++E L + + +EFMWN LGYILTCPSNLGTGLRAGVHIKLP L
Sbjct: 286 FCRGLKEVERLIQERGWEFMWNERLGYILTCPSNLGTGLRAGVHIKLPLL 335
>ref|NP_001029828.1| creatine kinase S-type, mitochondrial precursor [Bos taurus].
Length = 419
Score = 409 bits (1052), Expect = e-114
Identities = 196/290 (67%), Positives = 227/290 (78%), Gaps = 1/290 (0%)
Frame = +3
Query: 132 FPAEDEFPDLSGHNNHMAKVLTPELYAELRAKSTPSGFTLDDVIQTGVDNPGHPYIMTVG 311
FP ++PDL HNN MA+ LTP +YA+LR K TPSG+TLD IQTGVDNPGHP+I TVG
Sbjct: 48 FPPSADYPDLRKHNNCMAECLTPAIYAKLRNKVTPSGYTLDQCIQTGVDNPGHPFIKTVG 107
Query: 312 CVAGDEESYDVFKELFDPIIEDRHGGYKPSD-EHKTDLNPDNLQGGDDLDPNYVLSSRVR 488
VAGDEESY+VF +LFDP+I+ RH GY P +H TDL+ + G D YVLSSRVR
Sbjct: 108 MVAGDEESYEVFADLFDPVIKLRHNGYDPRVMKHPTDLDASKITQGQ-FDERYVLSSRVR 166
Query: 489 TGRSIRGFCLPPHCSRGERRAIEKLAVEALSSLDGDLAGRYYALKSMTEAEQQQLIDDHF 668
TGRSIRG LPP CSR E R +E +A+ AL L GDLAGRYY L MTE +QQ+LIDDHF
Sbjct: 167 TGRSIRGLSLPPACSRAELREVENVAITALEGLKGDLAGRYYKLSEMTEQDQQRLIDDHF 226
Query: 669 LFDKPVSPLLLASGMARDWPDARGIWHNDNKTFLVWINEEDHLRVISMQKGGNMKEVFTR 848
LFDKPVSPLL +GMARDWPDARGIWHN +KTFL+WINEEDH RVISM+KGGNMK VF R
Sbjct: 227 LFDKPVSPLLTCAGMARDWPDARGIWHNYDKTFLIWINEEDHTRVISMEKGGNMKRVFER 286
Query: 849 FLHGLTQIETLFKSKNYEFMWNPHLGYILTCPSNLGTGLRAGVHIKLPHL 998
F GL ++E L + + +EFMWN LGYILTCPSNLGTGLRAGVH+++P L
Sbjct: 287 FCRGLKEVERLIQERGWEFMWNERLGYILTCPSNLGTGLRAGVHVRIPKL 336
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 38,171,891
Number of extensions: 1127633
Number of successful extensions: 5233
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 5196
Number of HSP's successfully gapped: 4
Length of query: 349
Length of database: 17,681,374
Length adjustment: 103
Effective length of query: 246
Effective length of database: 14,273,310
Effective search space: 3511234260
Effective search space used: 3511234260
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002009
(1047 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_537561.2| PREDICTED: similar to Creatine kinase B-type (C... 616 e-176
Alignment gi|XP_533641.2| PREDICTED: similar to Creatine kinase M-type (C... 529 e-150
Alignment gi|XP_868659.1| PREDICTED: similar to Creatine kinase B-type (C... 484 e-137
Alignment gi|XP_535451.1| PREDICTED: similar to creatine kinase, mitochon... 418 e-117
Alignment gi|XP_860111.1| PREDICTED: similar to creatine kinase, mitochon... 416 e-116
Alignment gi|NP_001138686.1| creatine kinase S-type, mitochondrial [Canis... 410 e-114
Alignment gi|XP_859467.1| PREDICTED: similar to creatine kinase, mitochon... 410 e-114
Alignment gi|XP_859430.1| PREDICTED: similar to creatine kinase, mitochon... 400 e-112
Alignment gi|XP_855058.1| PREDICTED: similar to creatine kinase, brain [C... 355 3e-98
Alignment gi|XP_860079.1| PREDICTED: similar to creatine kinase, mitochon... 335 3e-92
>ref|XP_537561.2| PREDICTED: similar to Creatine kinase B-type (Creatine kinase, B
chain) (B-CK) isoform 1 [Canis familiaris].
Length = 394
Score = 616 bits (1588), Expect = e-176
Identities = 299/315 (94%), Positives = 300/315 (95%), Gaps = 13/315 (4%)
Frame = +3
Query: 93 MPFSNSHNTLKLRFPAEDEFPDLSGHNNHMAKVLTPELYAELRAKSTPSGFTLDDVIQTG 272
MPFSNSHNTLKLRFPAEDEFPDLS HNNHMAKVLTPELYAELRAKSTPSGFTLDDVIQTG
Sbjct: 1 MPFSNSHNTLKLRFPAEDEFPDLSAHNNHMAKVLTPELYAELRAKSTPSGFTLDDVIQTG 60
Query: 273 VDNPG-------------HPYIMTVGCVAGDEESYDVFKELFDPIIEDRHGGYKPSDEHK 413
VDNPG HPYIMTVGCVAGDEESYDVFKELFDPIIEDRHGGYKPSDEHK
Sbjct: 61 VDNPGTLTSLSPFRVPPGHPYIMTVGCVAGDEESYDVFKELFDPIIEDRHGGYKPSDEHK 120
Query: 414 TDLNPDNLQGGDDLDPNYVLSSRVRTGRSIRGFCLPPHCSRGERRAIEKLAVEALSSLDG 593
TDLNPDNLQGGDDLDPNYVLSSRVRTGRSIRGFCLPPHCSRGERRAIEKLAVEALSSLDG
Sbjct: 121 TDLNPDNLQGGDDLDPNYVLSSRVRTGRSIRGFCLPPHCSRGERRAIEKLAVEALSSLDG 180
Query: 594 DLAGRYYALKSMTEAEQQQLIDDHFLFDKPVSPLLLASGMARDWPDARGIWHNDNKTFLV 773
DLAGRYYALKSMTEAEQQQLIDDHFLFDKPVSPLLLASGMARDWPDARGIWHNDNKTFLV
Sbjct: 181 DLAGRYYALKSMTEAEQQQLIDDHFLFDKPVSPLLLASGMARDWPDARGIWHNDNKTFLV 240
Query: 774 WINEEDHLRVISMQKGGNMKEVFTRFLHGLTQIETLFKSKNYEFMWNPHLGYILTCPSNL 953
WINEEDHLRVISMQKGGNMKEVFTRF +GLTQIETLFKSKNYEFMWNPHLGYILTCPSNL
Sbjct: 241 WINEEDHLRVISMQKGGNMKEVFTRFCNGLTQIETLFKSKNYEFMWNPHLGYILTCPSNL 300
Query: 954 GTGLRAGVHIKLPHL 998
GTGLRAGVHIKLPHL
Sbjct: 301 GTGLRAGVHIKLPHL 315
>ref|XP_533641.2| PREDICTED: similar to Creatine kinase M-type (Creatine kinase, M
chain) (M-CK) [Canis familiaris].
Length = 488
Score = 529 bits (1362), Expect = e-150
Identities = 243/302 (80%), Positives = 271/302 (89%)
Frame = +3
Query: 93 MPFSNSHNTLKLRFPAEDEFPDLSGHNNHMAKVLTPELYAELRAKSTPSGFTLDDVIQTG 272
MPF N+HN KL + E+E+PDL+ HNNHMAK LTPE+Y +LR K TPSGFTLDDVIQTG
Sbjct: 108 MPFGNTHNKFKLNYKPEEEYPDLTKHNNHMAKALTPEIYKKLRDKETPSGFTLDDVIQTG 167
Query: 273 VDNPGHPYIMTVGCVAGDEESYDVFKELFDPIIEDRHGGYKPSDEHKTDLNPDNLQGGDD 452
VDNPGHP+IMTVGCVAGDEESY VFK+LFDPII+DRHGGYKP+D+HKTDLN +NL+GGDD
Sbjct: 168 VDNPGHPFIMTVGCVAGDEESYQVFKDLFDPIIQDRHGGYKPTDKHKTDLNHENLKGGDD 227
Query: 453 LDPNYVLSSRVRTGRSIRGFCLPPHCSRGERRAIEKLAVEALSSLDGDLAGRYYALKSMT 632
LDPNYVLSSRVRTGRSI+G+ LPPHCSRGERRA+EKL++EAL+SL G+ G+YY LKSMT
Sbjct: 228 LDPNYVLSSRVRTGRSIKGYTLPPHCSRGERRAVEKLSIEALNSLTGEFKGKYYPLKSMT 287
Query: 633 EAEQQQLIDDHFLFDKPVSPLLLASGMARDWPDARGIWHNDNKTFLVWINEEDHLRVISM 812
E EQQQLIDDHFLFDKPVSPLLLASGMARDWPDARGIWHNDNKTFLVW+NEEDHLRVISM
Sbjct: 288 EQEQQQLIDDHFLFDKPVSPLLLASGMARDWPDARGIWHNDNKTFLVWVNEEDHLRVISM 347
Query: 813 QKGGNMKEVFTRFLHGLTQIETLFKSKNYEFMWNPHLGYILTCPSNLGTGLRAGVHIKLP 992
QKGGNMKEVF RF GL +IE +FK + FMWN HLGY+LTCPSNLGTGLR GVH+KL
Sbjct: 348 QKGGNMKEVFRRFCVGLQKIEEIFKKAGHPFMWNEHLGYVLTCPSNLGTGLRGGVHVKLA 407
Query: 993 HL 998
HL
Sbjct: 408 HL 409
>ref|XP_868659.1| PREDICTED: similar to Creatine kinase B-type (Creatine kinase, B
chain) (B-CK) isoform 3 [Canis familiaris].
Length = 312
Score = 484 bits (1246), Expect = e-137
Identities = 231/233 (99%), Positives = 232/233 (99%)
Frame = +3
Query: 300 MTVGCVAGDEESYDVFKELFDPIIEDRHGGYKPSDEHKTDLNPDNLQGGDDLDPNYVLSS 479
MTVGCVAGDEESYDVFKELFDPIIEDRHGGYKPSDEHKTDLNPDNLQGGDDLDPNYVLSS
Sbjct: 1 MTVGCVAGDEESYDVFKELFDPIIEDRHGGYKPSDEHKTDLNPDNLQGGDDLDPNYVLSS 60
Query: 480 RVRTGRSIRGFCLPPHCSRGERRAIEKLAVEALSSLDGDLAGRYYALKSMTEAEQQQLID 659
RVRTGRSIRGFCLPPHCSRGERRAIEKLAVEALSSLDGDLAGRYYALKSMTEAEQQQLID
Sbjct: 61 RVRTGRSIRGFCLPPHCSRGERRAIEKLAVEALSSLDGDLAGRYYALKSMTEAEQQQLID 120
Query: 660 DHFLFDKPVSPLLLASGMARDWPDARGIWHNDNKTFLVWINEEDHLRVISMQKGGNMKEV 839
DHFLFDKPVSPLLLASGMARDWPDARGIWHNDNKTFLVWINEEDHLRVISMQKGGNMKEV
Sbjct: 121 DHFLFDKPVSPLLLASGMARDWPDARGIWHNDNKTFLVWINEEDHLRVISMQKGGNMKEV 180
Query: 840 FTRFLHGLTQIETLFKSKNYEFMWNPHLGYILTCPSNLGTGLRAGVHIKLPHL 998
FTRF +GLTQIETLFKSKNYEFMWNPHLGYILTCPSNLGTGLRAGVHIKLPHL
Sbjct: 181 FTRFCNGLTQIETLFKSKNYEFMWNPHLGYILTCPSNLGTGLRAGVHIKLPHL 233
>ref|XP_535451.1| PREDICTED: similar to creatine kinase, mitochondrial 1B precursor
isoform 1 [Canis familiaris].
Length = 417
Score = 418 bits (1075), Expect = e-117
Identities = 200/290 (68%), Positives = 232/290 (80%), Gaps = 1/290 (0%)
Frame = +3
Query: 132 FPAEDEFPDLSGHNNHMAKVLTPELYAELRAKSTPSGFTLDDVIQTGVDNPGHPYIMTVG 311
+P E+PDL HNN MA LTP +YA L K+TP+G+TLD IQTGVDNPGHP+I TVG
Sbjct: 47 YPPSAEYPDLRKHNNCMASHLTPAVYARLCDKTTPTGWTLDQCIQTGVDNPGHPFIKTVG 106
Query: 312 CVAGDEESYDVFKELFDPIIEDRHGGYKPSD-EHKTDLNPDNLQGGDDLDPNYVLSSRVR 488
VAGDEE+Y+VF ELFDP+I++RH GY P +H TDL+ ++ G D YVLSSRVR
Sbjct: 107 MVAGDEETYEVFAELFDPVIQERHNGYDPRTMKHTTDLDASKIRSGY-FDERYVLSSRVR 165
Query: 489 TGRSIRGFCLPPHCSRGERRAIEKLAVEALSSLDGDLAGRYYALKSMTEAEQQQLIDDHF 668
TGRSIRG LPP C+R ERR +E++ V+ALS L GDLAGRYY L MTEAEQQQLIDDHF
Sbjct: 166 TGRSIRGLSLPPACTRAERREVERVVVDALSGLKGDLAGRYYRLSEMTEAEQQQLIDDHF 225
Query: 669 LFDKPVSPLLLASGMARDWPDARGIWHNDNKTFLVWINEEDHLRVISMQKGGNMKEVFTR 848
LFDKPVSPLL A+GMARDWPDARGIWHN+ K+FL+W+NEEDH RVISM+KGGNMK VF R
Sbjct: 226 LFDKPVSPLLTAAGMARDWPDARGIWHNNEKSFLIWVNEEDHTRVISMEKGGNMKRVFER 285
Query: 849 FLHGLTQIETLFKSKNYEFMWNPHLGYILTCPSNLGTGLRAGVHIKLPHL 998
F GL ++E L + + +EFMWN LGYILTCPSNLGTGLRAGVHIKLP L
Sbjct: 286 FCRGLKEVERLIQERGWEFMWNERLGYILTCPSNLGTGLRAGVHIKLPLL 335
>ref|XP_860111.1| PREDICTED: similar to creatine kinase, mitochondrial 1, ubiquitous
isoform 4 [Canis familiaris].
Length = 376
Score = 416 bits (1068), Expect = e-116
Identities = 199/285 (69%), Positives = 230/285 (80%), Gaps = 1/285 (0%)
Frame = +3
Query: 147 EFPDLSGHNNHMAKVLTPELYAELRAKSTPSGFTLDDVIQTGVDNPGHPYIMTVGCVAGD 326
E+PDL HNN MA LTP +YA L K+TP+G+TLD IQTGVDNPGHP+I TVG VAGD
Sbjct: 11 EYPDLRKHNNCMASHLTPAVYARLCDKTTPTGWTLDQCIQTGVDNPGHPFIKTVGMVAGD 70
Query: 327 EESYDVFKELFDPIIEDRHGGYKPSD-EHKTDLNPDNLQGGDDLDPNYVLSSRVRTGRSI 503
EE+Y+VF ELFDP+I++RH GY P +H TDL+ ++ G D YVLSSRVRTGRSI
Sbjct: 71 EETYEVFAELFDPVIQERHNGYDPRTMKHTTDLDASKIRSGY-FDERYVLSSRVRTGRSI 129
Query: 504 RGFCLPPHCSRGERRAIEKLAVEALSSLDGDLAGRYYALKSMTEAEQQQLIDDHFLFDKP 683
RG LPP C+R ERR +E++ V+ALS L GDLAGRYY L MTEAEQQQLIDDHFLFDKP
Sbjct: 130 RGLSLPPACTRAERREVERVVVDALSGLKGDLAGRYYRLSEMTEAEQQQLIDDHFLFDKP 189
Query: 684 VSPLLLASGMARDWPDARGIWHNDNKTFLVWINEEDHLRVISMQKGGNMKEVFTRFLHGL 863
VSPLL A+GMARDWPDARGIWHN+ K+FL+W+NEEDH RVISM+KGGNMK VF RF GL
Sbjct: 190 VSPLLTAAGMARDWPDARGIWHNNEKSFLIWVNEEDHTRVISMEKGGNMKRVFERFCRGL 249
Query: 864 TQIETLFKSKNYEFMWNPHLGYILTCPSNLGTGLRAGVHIKLPHL 998
++E L + + +EFMWN LGYILTCPSNLGTGLRAGVHIKLP L
Sbjct: 250 KEVERLIQERGWEFMWNERLGYILTCPSNLGTGLRAGVHIKLPLL 294
>ref|NP_001138686.1| creatine kinase S-type, mitochondrial [Canis lupus familiaris].
Length = 419
Score = 410 bits (1054), Expect = e-114
Identities = 195/290 (67%), Positives = 229/290 (78%), Gaps = 1/290 (0%)
Frame = +3
Query: 132 FPAEDEFPDLSGHNNHMAKVLTPELYAELRAKSTPSGFTLDDVIQTGVDNPGHPYIMTVG 311
FP ++PDL HNN MA+ LTP +YA+LR K TP+G+TLD IQTGVDNPGHP+I TVG
Sbjct: 48 FPPSADYPDLRKHNNCMAECLTPAIYAKLRNKVTPNGYTLDQCIQTGVDNPGHPFIKTVG 107
Query: 312 CVAGDEESYDVFKELFDPIIEDRHGGYKPSD-EHKTDLNPDNLQGGDDLDPNYVLSSRVR 488
VAGDEESY+VF +LFDP+I+ RH GY P +H TDL+ + G D YVLSSRVR
Sbjct: 108 MVAGDEESYEVFADLFDPVIKLRHNGYDPRVMKHPTDLDASKITQGQ-FDERYVLSSRVR 166
Query: 489 TGRSIRGFCLPPHCSRGERRAIEKLAVEALSSLDGDLAGRYYALKSMTEAEQQQLIDDHF 668
TGRSIRG LPP C+R ERR +E +A+ AL L GDLAGRYY L MTE +QQ+LIDDHF
Sbjct: 167 TGRSIRGLSLPPACTRAERREVENVAITALEGLKGDLAGRYYKLSEMTEQDQQRLIDDHF 226
Query: 669 LFDKPVSPLLLASGMARDWPDARGIWHNDNKTFLVWINEEDHLRVISMQKGGNMKEVFTR 848
LFDKPVSPLL +GMARDWPDARGIWHN +KTFL+WINEEDH RVISM+KGGNMK VF R
Sbjct: 227 LFDKPVSPLLTCAGMARDWPDARGIWHNYDKTFLIWINEEDHTRVISMEKGGNMKRVFER 286
Query: 849 FLHGLTQIETLFKSKNYEFMWNPHLGYILTCPSNLGTGLRAGVHIKLPHL 998
F GL ++E L +++ +EFMWN LGYILTCPSNLGTGLRAGVH+++P L
Sbjct: 287 FCRGLKEVERLIQARGWEFMWNERLGYILTCPSNLGTGLRAGVHVRIPKL 336
>ref|XP_859467.1| PREDICTED: similar to creatine kinase, mitochondrial 2 isoform 4
[Canis familiaris].
Length = 413
Score = 410 bits (1054), Expect = e-114
Identities = 195/290 (67%), Positives = 229/290 (78%), Gaps = 1/290 (0%)
Frame = +3
Query: 132 FPAEDEFPDLSGHNNHMAKVLTPELYAELRAKSTPSGFTLDDVIQTGVDNPGHPYIMTVG 311
FP ++PDL HNN MA+ LTP +YA+LR K TP+G+TLD IQTGVDNPGHP+I TVG
Sbjct: 48 FPPSADYPDLRKHNNCMAECLTPAIYAKLRNKVTPNGYTLDQCIQTGVDNPGHPFIKTVG 107
Query: 312 CVAGDEESYDVFKELFDPIIEDRHGGYKPSD-EHKTDLNPDNLQGGDDLDPNYVLSSRVR 488
VAGDEESY+VF +LFDP+I+ RH GY P +H TDL+ + G D YVLSSRVR
Sbjct: 108 MVAGDEESYEVFADLFDPVIKLRHNGYDPRVMKHPTDLDASKITQGQ-FDERYVLSSRVR 166
Query: 489 TGRSIRGFCLPPHCSRGERRAIEKLAVEALSSLDGDLAGRYYALKSMTEAEQQQLIDDHF 668
TGRSIRG LPP C+R ERR +E +A+ AL L GDLAGRYY L MTE +QQ+LIDDHF
Sbjct: 167 TGRSIRGLSLPPACTRAERREVENVAITALEGLKGDLAGRYYKLSEMTEQDQQRLIDDHF 226
Query: 669 LFDKPVSPLLLASGMARDWPDARGIWHNDNKTFLVWINEEDHLRVISMQKGGNMKEVFTR 848
LFDKPVSPLL +GMARDWPDARGIWHN +KTFL+WINEEDH RVISM+KGGNMK VF R
Sbjct: 227 LFDKPVSPLLTCAGMARDWPDARGIWHNYDKTFLIWINEEDHTRVISMEKGGNMKRVFER 286
Query: 849 FLHGLTQIETLFKSKNYEFMWNPHLGYILTCPSNLGTGLRAGVHIKLPHL 998
F GL ++E L +++ +EFMWN LGYILTCPSNLGTGLRAGVH+++P L
Sbjct: 287 FCRGLKEVERLIQARGWEFMWNERLGYILTCPSNLGTGLRAGVHVRIPKL 336
>ref|XP_859430.1| PREDICTED: similar to creatine kinase, mitochondrial 2 isoform 3
[Canis familiaris].
Length = 420
Score = 400 bits (1029), Expect = e-112
Identities = 192/283 (67%), Positives = 223/283 (78%), Gaps = 1/283 (0%)
Frame = +3
Query: 132 FPAEDEFPDLSGHNNHMAKVLTPELYAELRAKSTPSGFTLDDVIQTGVDNPGHPYIMTVG 311
FP ++PDL HNN MA+ LTP +YA+LR K TP+G+TLD IQTGVDNPGHP+I TVG
Sbjct: 48 FPPSADYPDLRKHNNCMAECLTPAIYAKLRNKVTPNGYTLDQCIQTGVDNPGHPFIKTVG 107
Query: 312 CVAGDEESYDVFKELFDPIIEDRHGGYKPSD-EHKTDLNPDNLQGGDDLDPNYVLSSRVR 488
VAGDEESY+VF +LFDP+I+ RH GY P +H TDL+ + G D YVLSSRVR
Sbjct: 108 MVAGDEESYEVFADLFDPVIKLRHNGYDPRVMKHPTDLDASKITQGQ-FDERYVLSSRVR 166
Query: 489 TGRSIRGFCLPPHCSRGERRAIEKLAVEALSSLDGDLAGRYYALKSMTEAEQQQLIDDHF 668
TGRSIRG LPP C+R ERR +E +A+ AL L GDLAGRYY L MTE +QQ+LIDDHF
Sbjct: 167 TGRSIRGLSLPPACTRAERREVENVAITALEGLKGDLAGRYYKLSEMTEQDQQRLIDDHF 226
Query: 669 LFDKPVSPLLLASGMARDWPDARGIWHNDNKTFLVWINEEDHLRVISMQKGGNMKEVFTR 848
LFDKPVSPLL +GMARDWPDARGIWHN +KTFL+WINEEDH RVISM+KGGNMK VF R
Sbjct: 227 LFDKPVSPLLTCAGMARDWPDARGIWHNYDKTFLIWINEEDHTRVISMEKGGNMKRVFER 286
Query: 849 FLHGLTQIETLFKSKNYEFMWNPHLGYILTCPSNLGTGLRAGV 977
F GL ++E L +++ +EFMWN LGYILTCPSNLGTGLRAGV
Sbjct: 287 FCRGLKEVERLIQARGWEFMWNERLGYILTCPSNLGTGLRAGV 329
>ref|XP_855058.1| PREDICTED: similar to creatine kinase, brain [Canis familiaris].
Length = 414
Score = 355 bits (912), Expect = 3e-98
Identities = 187/288 (64%), Positives = 204/288 (70%)
Frame = +3
Query: 135 PAEDEFPDLSGHNNHMAKVLTPELYAELRAKSTPSGFTLDDVIQTGVDNPGHPYIMTVGC 314
PAEDE PDLSG +N AK TP+LYAELR KS+PSG DDVI+TG
Sbjct: 79 PAEDELPDLSGRSNRTAKARTPQLYAELRPKSSPSGLPPDDVIRTG-------------- 124
Query: 315 VAGDEESYDVFKELFDPIIEDRHGGYKPSDEHKTDLNPDNLQGGDDLDPNYVLSSRVRTG 494
D ESYDV +EL DPI+EDR GGYKPSDEHKTDLNPDNLQG ++
Sbjct: 125 ---DGESYDVCQELLDPILEDRPGGYKPSDEHKTDLNPDNLQGARGCARVAASAASASPR 181
Query: 495 RSIRGFCLPPHCSRGERRAIEKLAVEALSSLDGDLAGRYYALKSMTEAEQQQLIDDHFLF 674
+ G +P S RA RY+ALKSMTEAEQQQLI HFLF
Sbjct: 182 TAAAGSAVPSSSSWKLCRAWTATRP------------RYHALKSMTEAEQQQLIHHHFLF 229
Query: 675 DKPVSPLLLASGMARDWPDARGIWHNDNKTFLVWINEEDHLRVISMQKGGNMKEVFTRFL 854
DKP+SPLLLASGMARDWPDARGIW +DNKTFLVWI EEDHLRVIS+Q GGN KEVFTRF
Sbjct: 230 DKPLSPLLLASGMARDWPDARGIWRDDNKTFLVWIKEEDHLRVISIQIGGNTKEVFTRFC 289
Query: 855 HGLTQIETLFKSKNYEFMWNPHLGYILTCPSNLGTGLRAGVHIKLPHL 998
+GLTQIETL KSKNY+FMWNPHLGY+LTCPSNLGTGLRAGVHIKLPHL
Sbjct: 290 NGLTQIETLLKSKNYQFMWNPHLGYVLTCPSNLGTGLRAGVHIKLPHL 337
>ref|XP_860079.1| PREDICTED: similar to creatine kinase, mitochondrial 1B precursor
isoform 3 [Canis familiaris].
Length = 363
Score = 335 bits (860), Expect = 3e-92
Identities = 168/289 (58%), Positives = 194/289 (67%)
Frame = +3
Query: 132 FPAEDEFPDLSGHNNHMAKVLTPELYAELRAKSTPSGFTLDDVIQTGVDNPGHPYIMTVG 311
+P E+PDL HNN MA LTP +YA L K+TP+G+TLD IQTGVDNPGHP+I TVG
Sbjct: 47 YPPSAEYPDLRKHNNCMASHLTPAVYARLCDKTTPTGWTLDQCIQTGVDNPGHPFIKTVG 106
Query: 312 CVAGDEESYDVFKELFDPIIEDRHGGYKPSDEHKTDLNPDNLQGGDDLDPNYVLSSRVRT 491
VAGDEE+Y+VF ELFDP+I++RH GY DP
Sbjct: 107 MVAGDEETYEVFAELFDPVIQERHNGY---------------------DPR--------- 136
Query: 492 GRSIRGFCLPPHCSRGERRAIEKLAVEALSSLDGDLAGRYYALKSMTEAEQQQLIDDHFL 671
++ + LDGDLAGRYY L MTEAEQQQLIDDHFL
Sbjct: 137 ------------------------TMKHTTDLDGDLAGRYYRLSEMTEAEQQQLIDDHFL 172
Query: 672 FDKPVSPLLLASGMARDWPDARGIWHNDNKTFLVWINEEDHLRVISMQKGGNMKEVFTRF 851
FDKPVSPLL A+GMARDWPDARGIWHN+ K+FL+W+NEEDH RVISM+KGGNMK VF RF
Sbjct: 173 FDKPVSPLLTAAGMARDWPDARGIWHNNEKSFLIWVNEEDHTRVISMEKGGNMKRVFERF 232
Query: 852 LHGLTQIETLFKSKNYEFMWNPHLGYILTCPSNLGTGLRAGVHIKLPHL 998
GL ++E L + + +EFMWN LGYILTCPSNLGTGLRAGVHIKLP L
Sbjct: 233 CRGLKEVERLIQERGWEFMWNERLGYILTCPSNLGTGLRAGVHIKLPLL 281
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 39,802,905
Number of extensions: 1155366
Number of successful extensions: 5641
Number of sequences better than 1.0e-05: 21
Number of HSP's gapped: 5584
Number of HSP's successfully gapped: 28
Length of query: 349
Length of database: 18,874,504
Length adjustment: 104
Effective length of query: 245
Effective length of database: 15,407,560
Effective search space: 3774852200
Effective search space used: 3774852200
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002009
(1047 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001814.2| creatine kinase B-type [Homo sapiens]. 614 e-176
Alignment gi|NP_001815.2| creatine kinase M-type [Homo sapiens]. 526 e-149
Alignment gi|NP_001015001.1| creatine kinase U-type, mitochondrial precur... 417 e-117
Alignment gi|NP_066270.1| creatine kinase U-type, mitochondrial precursor... 417 e-117
Alignment gi|NP_001093206.1| creatine kinase S-type, mitochondrial precur... 410 e-114
Alignment gi|NP_001093205.1| creatine kinase S-type, mitochondrial precur... 410 e-114
Alignment gi|NP_001816.2| creatine kinase S-type, mitochondrial precursor... 410 e-114
>ref|NP_001814.2| creatine kinase B-type [Homo sapiens].
Length = 381
Score = 614 bits (1584), Expect = e-176
Identities = 293/302 (97%), Positives = 298/302 (98%)
Frame = +3
Query: 93 MPFSNSHNTLKLRFPAEDEFPDLSGHNNHMAKVLTPELYAELRAKSTPSGFTLDDVIQTG 272
MPFSNSHN LKLRFPAEDEFPDLS HNNHMAKVLTPELYAELRAKSTPSGFTLDDVIQTG
Sbjct: 1 MPFSNSHNALKLRFPAEDEFPDLSAHNNHMAKVLTPELYAELRAKSTPSGFTLDDVIQTG 60
Query: 273 VDNPGHPYIMTVGCVAGDEESYDVFKELFDPIIEDRHGGYKPSDEHKTDLNPDNLQGGDD 452
VDNPGHPYIMTVGCVAGDEESY+VFK+LFDPIIEDRHGGYKPSDEHKTDLNPDNLQGGDD
Sbjct: 61 VDNPGHPYIMTVGCVAGDEESYEVFKDLFDPIIEDRHGGYKPSDEHKTDLNPDNLQGGDD 120
Query: 453 LDPNYVLSSRVRTGRSIRGFCLPPHCSRGERRAIEKLAVEALSSLDGDLAGRYYALKSMT 632
LDPNYVLSSRVRTGRSIRGFCLPPHCSRGERRAIEKLAVEALSSLDGDLAGRYYALKSMT
Sbjct: 121 LDPNYVLSSRVRTGRSIRGFCLPPHCSRGERRAIEKLAVEALSSLDGDLAGRYYALKSMT 180
Query: 633 EAEQQQLIDDHFLFDKPVSPLLLASGMARDWPDARGIWHNDNKTFLVWINEEDHLRVISM 812
EAEQQQLIDDHFLFDKPVSPLLLASGMARDWPDARGIWHNDNKTFLVW+NEEDHLRVISM
Sbjct: 181 EAEQQQLIDDHFLFDKPVSPLLLASGMARDWPDARGIWHNDNKTFLVWVNEEDHLRVISM 240
Query: 813 QKGGNMKEVFTRFLHGLTQIETLFKSKNYEFMWNPHLGYILTCPSNLGTGLRAGVHIKLP 992
QKGGNMKEVFTRF GLTQIETLFKSK+YEFMWNPHLGYILTCPSNLGTGLRAGVHIKLP
Sbjct: 241 QKGGNMKEVFTRFCTGLTQIETLFKSKDYEFMWNPHLGYILTCPSNLGTGLRAGVHIKLP 300
Query: 993 HL 998
+L
Sbjct: 301 NL 302
>ref|NP_001815.2| creatine kinase M-type [Homo sapiens].
Length = 381
Score = 526 bits (1355), Expect = e-149
Identities = 244/302 (80%), Positives = 271/302 (89%)
Frame = +3
Query: 93 MPFSNSHNTLKLRFPAEDEFPDLSGHNNHMAKVLTPELYAELRAKSTPSGFTLDDVIQTG 272
MPF N+HN KL + E+E+PDLS HNNHMAKVLT ELY +LR K TPSGFT+DDVIQTG
Sbjct: 1 MPFGNTHNKFKLNYKPEEEYPDLSKHNNHMAKVLTLELYKKLRDKETPSGFTVDDVIQTG 60
Query: 273 VDNPGHPYIMTVGCVAGDEESYDVFKELFDPIIEDRHGGYKPSDEHKTDLNPDNLQGGDD 452
VDNPGHP+IMTVGCVAGDEESY+VFKELFDPII DRHGGYKP+D+HKTDLN +NL+GGDD
Sbjct: 61 VDNPGHPFIMTVGCVAGDEESYEVFKELFDPIISDRHGGYKPTDKHKTDLNHENLKGGDD 120
Query: 453 LDPNYVLSSRVRTGRSIRGFCLPPHCSRGERRAIEKLAVEALSSLDGDLAGRYYALKSMT 632
LDPNYVLSSRVRTGRSI+G+ LPPHCSRGERRA+EKL+VEAL+SL G+ G+YY LKSMT
Sbjct: 121 LDPNYVLSSRVRTGRSIKGYTLPPHCSRGERRAVEKLSVEALNSLTGEFKGKYYPLKSMT 180
Query: 633 EAEQQQLIDDHFLFDKPVSPLLLASGMARDWPDARGIWHNDNKTFLVWINEEDHLRVISM 812
E EQQQLIDDHFLFDKPVSPLLLASGMARDWPDARGIWHNDNK+FLVW+NEEDHLRVISM
Sbjct: 181 EKEQQQLIDDHFLFDKPVSPLLLASGMARDWPDARGIWHNDNKSFLVWVNEEDHLRVISM 240
Query: 813 QKGGNMKEVFTRFLHGLTQIETLFKSKNYEFMWNPHLGYILTCPSNLGTGLRAGVHIKLP 992
+KGGNMKEVF RF GL +IE +FK + FMWN HLGY+LTCPSNLGTGLR GVH+KL
Sbjct: 241 EKGGNMKEVFRRFCVGLQKIEEIFKKAGHPFMWNQHLGYVLTCPSNLGTGLRGGVHVKLA 300
Query: 993 HL 998
HL
Sbjct: 301 HL 302
>ref|NP_001015001.1| creatine kinase U-type, mitochondrial precursor [Homo sapiens].
Length = 417
Score = 417 bits (1072), Expect = e-117
Identities = 199/290 (68%), Positives = 232/290 (80%), Gaps = 1/290 (0%)
Frame = +3
Query: 132 FPAEDEFPDLSGHNNHMAKVLTPELYAELRAKSTPSGFTLDDVIQTGVDNPGHPYIMTVG 311
+P E+PDL HNN MA LTP +YA L K+TP+G+TLD IQTGVDNPGHP+I TVG
Sbjct: 47 YPPSAEYPDLRKHNNCMASHLTPAVYARLCDKTTPTGWTLDQCIQTGVDNPGHPFIKTVG 106
Query: 312 CVAGDEESYDVFKELFDPIIEDRHGGYKPSD-EHKTDLNPDNLQGGDDLDPNYVLSSRVR 488
VAGDEE+Y+VF +LFDP+I++RH GY P +H TDL+ ++ G D YVLSSRVR
Sbjct: 107 MVAGDEETYEVFADLFDPVIQERHNGYDPRTMKHTTDLDASKIRSGY-FDERYVLSSRVR 165
Query: 489 TGRSIRGFCLPPHCSRGERRAIEKLAVEALSSLDGDLAGRYYALKSMTEAEQQQLIDDHF 668
TGRSIRG LPP C+R ERR +E++ V+ALS L GDLAGRYY L MTEAEQQQLIDDHF
Sbjct: 166 TGRSIRGLSLPPACTRAERREVERVVVDALSGLKGDLAGRYYRLSEMTEAEQQQLIDDHF 225
Query: 669 LFDKPVSPLLLASGMARDWPDARGIWHNDNKTFLVWINEEDHLRVISMQKGGNMKEVFTR 848
LFDKPVSPLL A+GMARDWPDARGIWHN+ K+FL+W+NEEDH RVISM+KGGNMK VF R
Sbjct: 226 LFDKPVSPLLTAAGMARDWPDARGIWHNNEKSFLIWVNEEDHTRVISMEKGGNMKRVFER 285
Query: 849 FLHGLTQIETLFKSKNYEFMWNPHLGYILTCPSNLGTGLRAGVHIKLPHL 998
F GL ++E L + + +EFMWN LGYILTCPSNLGTGLRAGVHIKLP L
Sbjct: 286 FCRGLKEVERLIQERGWEFMWNERLGYILTCPSNLGTGLRAGVHIKLPLL 335
>ref|NP_066270.1| creatine kinase U-type, mitochondrial precursor [Homo sapiens].
Length = 417
Score = 417 bits (1072), Expect = e-117
Identities = 199/290 (68%), Positives = 232/290 (80%), Gaps = 1/290 (0%)
Frame = +3
Query: 132 FPAEDEFPDLSGHNNHMAKVLTPELYAELRAKSTPSGFTLDDVIQTGVDNPGHPYIMTVG 311
+P E+PDL HNN MA LTP +YA L K+TP+G+TLD IQTGVDNPGHP+I TVG
Sbjct: 47 YPPSAEYPDLRKHNNCMASHLTPAVYARLCDKTTPTGWTLDQCIQTGVDNPGHPFIKTVG 106
Query: 312 CVAGDEESYDVFKELFDPIIEDRHGGYKPSD-EHKTDLNPDNLQGGDDLDPNYVLSSRVR 488
VAGDEE+Y+VF +LFDP+I++RH GY P +H TDL+ ++ G D YVLSSRVR
Sbjct: 107 MVAGDEETYEVFADLFDPVIQERHNGYDPRTMKHTTDLDASKIRSGY-FDERYVLSSRVR 165
Query: 489 TGRSIRGFCLPPHCSRGERRAIEKLAVEALSSLDGDLAGRYYALKSMTEAEQQQLIDDHF 668
TGRSIRG LPP C+R ERR +E++ V+ALS L GDLAGRYY L MTEAEQQQLIDDHF
Sbjct: 166 TGRSIRGLSLPPACTRAERREVERVVVDALSGLKGDLAGRYYRLSEMTEAEQQQLIDDHF 225
Query: 669 LFDKPVSPLLLASGMARDWPDARGIWHNDNKTFLVWINEEDHLRVISMQKGGNMKEVFTR 848
LFDKPVSPLL A+GMARDWPDARGIWHN+ K+FL+W+NEEDH RVISM+KGGNMK VF R
Sbjct: 226 LFDKPVSPLLTAAGMARDWPDARGIWHNNEKSFLIWVNEEDHTRVISMEKGGNMKRVFER 285
Query: 849 FLHGLTQIETLFKSKNYEFMWNPHLGYILTCPSNLGTGLRAGVHIKLPHL 998
F GL ++E L + + +EFMWN LGYILTCPSNLGTGLRAGVHIKLP L
Sbjct: 286 FCRGLKEVERLIQERGWEFMWNERLGYILTCPSNLGTGLRAGVHIKLPLL 335
>ref|NP_001093206.1| creatine kinase S-type, mitochondrial precursor [Homo sapiens].
Length = 419
Score = 410 bits (1054), Expect = e-114
Identities = 195/290 (67%), Positives = 229/290 (78%), Gaps = 1/290 (0%)
Frame = +3
Query: 132 FPAEDEFPDLSGHNNHMAKVLTPELYAELRAKSTPSGFTLDDVIQTGVDNPGHPYIMTVG 311
FP ++PDL HNN MA+ LTP +YA+LR K TP+G+TLD IQTGVDNPGHP+I TVG
Sbjct: 48 FPPSADYPDLRKHNNCMAECLTPAIYAKLRNKVTPNGYTLDQCIQTGVDNPGHPFIKTVG 107
Query: 312 CVAGDEESYDVFKELFDPIIEDRHGGYKPSD-EHKTDLNPDNLQGGDDLDPNYVLSSRVR 488
VAGDEESY+VF +LFDP+I+ RH GY P +H TDL+ + G D +YVLSSRVR
Sbjct: 108 MVAGDEESYEVFADLFDPVIKLRHNGYDPRVMKHTTDLDASKITQGQ-FDEHYVLSSRVR 166
Query: 489 TGRSIRGFCLPPHCSRGERRAIEKLAVEALSSLDGDLAGRYYALKSMTEAEQQQLIDDHF 668
TGRSIRG LPP C+R ERR +E +A+ AL L GDLAGRYY L MTE +QQ+LIDDHF
Sbjct: 167 TGRSIRGLSLPPACTRAERREVENVAITALEGLKGDLAGRYYKLSEMTEQDQQRLIDDHF 226
Query: 669 LFDKPVSPLLLASGMARDWPDARGIWHNDNKTFLVWINEEDHLRVISMQKGGNMKEVFTR 848
LFDKPVSPLL +GMARDWPDARGIWHN +KTFL+WINEEDH RVISM+KGGNMK VF R
Sbjct: 227 LFDKPVSPLLTCAGMARDWPDARGIWHNYDKTFLIWINEEDHTRVISMEKGGNMKRVFER 286
Query: 849 FLHGLTQIETLFKSKNYEFMWNPHLGYILTCPSNLGTGLRAGVHIKLPHL 998
F GL ++E L + + +EFMWN LGYILTCPSNLGTGLRAGVH+++P L
Sbjct: 287 FCRGLKEVERLIQERGWEFMWNERLGYILTCPSNLGTGLRAGVHVRIPKL 336
>ref|NP_001093205.1| creatine kinase S-type, mitochondrial precursor [Homo sapiens].
Length = 419
Score = 410 bits (1054), Expect = e-114
Identities = 195/290 (67%), Positives = 229/290 (78%), Gaps = 1/290 (0%)
Frame = +3
Query: 132 FPAEDEFPDLSGHNNHMAKVLTPELYAELRAKSTPSGFTLDDVIQTGVDNPGHPYIMTVG 311
FP ++PDL HNN MA+ LTP +YA+LR K TP+G+TLD IQTGVDNPGHP+I TVG
Sbjct: 48 FPPSADYPDLRKHNNCMAECLTPAIYAKLRNKVTPNGYTLDQCIQTGVDNPGHPFIKTVG 107
Query: 312 CVAGDEESYDVFKELFDPIIEDRHGGYKPSD-EHKTDLNPDNLQGGDDLDPNYVLSSRVR 488
VAGDEESY+VF +LFDP+I+ RH GY P +H TDL+ + G D +YVLSSRVR
Sbjct: 108 MVAGDEESYEVFADLFDPVIKLRHNGYDPRVMKHTTDLDASKITQGQ-FDEHYVLSSRVR 166
Query: 489 TGRSIRGFCLPPHCSRGERRAIEKLAVEALSSLDGDLAGRYYALKSMTEAEQQQLIDDHF 668
TGRSIRG LPP C+R ERR +E +A+ AL L GDLAGRYY L MTE +QQ+LIDDHF
Sbjct: 167 TGRSIRGLSLPPACTRAERREVENVAITALEGLKGDLAGRYYKLSEMTEQDQQRLIDDHF 226
Query: 669 LFDKPVSPLLLASGMARDWPDARGIWHNDNKTFLVWINEEDHLRVISMQKGGNMKEVFTR 848
LFDKPVSPLL +GMARDWPDARGIWHN +KTFL+WINEEDH RVISM+KGGNMK VF R
Sbjct: 227 LFDKPVSPLLTCAGMARDWPDARGIWHNYDKTFLIWINEEDHTRVISMEKGGNMKRVFER 286
Query: 849 FLHGLTQIETLFKSKNYEFMWNPHLGYILTCPSNLGTGLRAGVHIKLPHL 998
F GL ++E L + + +EFMWN LGYILTCPSNLGTGLRAGVH+++P L
Sbjct: 287 FCRGLKEVERLIQERGWEFMWNERLGYILTCPSNLGTGLRAGVHVRIPKL 336
>ref|NP_001816.2| creatine kinase S-type, mitochondrial precursor [Homo sapiens].
Length = 419
Score = 410 bits (1054), Expect = e-114
Identities = 195/290 (67%), Positives = 229/290 (78%), Gaps = 1/290 (0%)
Frame = +3
Query: 132 FPAEDEFPDLSGHNNHMAKVLTPELYAELRAKSTPSGFTLDDVIQTGVDNPGHPYIMTVG 311
FP ++PDL HNN MA+ LTP +YA+LR K TP+G+TLD IQTGVDNPGHP+I TVG
Sbjct: 48 FPPSADYPDLRKHNNCMAECLTPAIYAKLRNKVTPNGYTLDQCIQTGVDNPGHPFIKTVG 107
Query: 312 CVAGDEESYDVFKELFDPIIEDRHGGYKPSD-EHKTDLNPDNLQGGDDLDPNYVLSSRVR 488
VAGDEESY+VF +LFDP+I+ RH GY P +H TDL+ + G D +YVLSSRVR
Sbjct: 108 MVAGDEESYEVFADLFDPVIKLRHNGYDPRVMKHTTDLDASKITQGQ-FDEHYVLSSRVR 166
Query: 489 TGRSIRGFCLPPHCSRGERRAIEKLAVEALSSLDGDLAGRYYALKSMTEAEQQQLIDDHF 668
TGRSIRG LPP C+R ERR +E +A+ AL L GDLAGRYY L MTE +QQ+LIDDHF
Sbjct: 167 TGRSIRGLSLPPACTRAERREVENVAITALEGLKGDLAGRYYKLSEMTEQDQQRLIDDHF 226
Query: 669 LFDKPVSPLLLASGMARDWPDARGIWHNDNKTFLVWINEEDHLRVISMQKGGNMKEVFTR 848
LFDKPVSPLL +GMARDWPDARGIWHN +KTFL+WINEEDH RVISM+KGGNMK VF R
Sbjct: 227 LFDKPVSPLLTCAGMARDWPDARGIWHNYDKTFLIWINEEDHTRVISMEKGGNMKRVFER 286
Query: 849 FLHGLTQIETLFKSKNYEFMWNPHLGYILTCPSNLGTGLRAGVHIKLPHL 998
F GL ++E L + + +EFMWN LGYILTCPSNLGTGLRAGVH+++P L
Sbjct: 287 FCRGLKEVERLIQERGWEFMWNERLGYILTCPSNLGTGLRAGVHVRIPKL 336
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 38,821,554
Number of extensions: 1110630
Number of successful extensions: 5020
Number of sequences better than 1.0e-05: 7
Number of HSP's gapped: 4980
Number of HSP's successfully gapped: 7
Length of query: 349
Length of database: 18,297,164
Length adjustment: 103
Effective length of query: 246
Effective length of database: 14,901,872
Effective search space: 3665860512
Effective search space used: 3665860512
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002009
(1047 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_067248.1| creatine kinase B-type [Mus musculus]. 609 e-174
Alignment gi|NP_031736.1| creatine kinase M-type [Mus musculus]. 524 e-149
Alignment gi|NP_034027.1| creatine kinase U-type, mitochondrial precursor... 418 e-117
Alignment gi|NP_940807.1| creatine kinase S-type, mitochondrial precursor... 412 e-115
>ref|NP_067248.1| creatine kinase B-type [Mus musculus].
Length = 381
Score = 609 bits (1571), Expect = e-174
Identities = 291/302 (96%), Positives = 295/302 (97%)
Frame = +3
Query: 93 MPFSNSHNTLKLRFPAEDEFPDLSGHNNHMAKVLTPELYAELRAKSTPSGFTLDDVIQTG 272
MPFSNSHNT KLRFPAEDEFPDLS HNNHMAKVLTPELYAELRAK TPSGFTLDD IQTG
Sbjct: 1 MPFSNSHNTQKLRFPAEDEFPDLSSHNNHMAKVLTPELYAELRAKCTPSGFTLDDAIQTG 60
Query: 273 VDNPGHPYIMTVGCVAGDEESYDVFKELFDPIIEDRHGGYKPSDEHKTDLNPDNLQGGDD 452
VDNPGHPYIMTVG VAGDEESYDVFK+LFDPIIE+RHGGY+PSDEHKTDLNPDNLQGGDD
Sbjct: 61 VDNPGHPYIMTVGAVAGDEESYDVFKDLFDPIIEERHGGYQPSDEHKTDLNPDNLQGGDD 120
Query: 453 LDPNYVLSSRVRTGRSIRGFCLPPHCSRGERRAIEKLAVEALSSLDGDLAGRYYALKSMT 632
LDPNYVLSSRVRTGRSIRGFCLPPHCSRGERRAIEKLAVEALSSLDGDL+GRYYALKSMT
Sbjct: 121 LDPNYVLSSRVRTGRSIRGFCLPPHCSRGERRAIEKLAVEALSSLDGDLSGRYYALKSMT 180
Query: 633 EAEQQQLIDDHFLFDKPVSPLLLASGMARDWPDARGIWHNDNKTFLVWINEEDHLRVISM 812
EAEQQQLIDDHFLFDKPVSPLLLASGMARDWPDARGIWHNDNKTFLVWINEEDHLRVISM
Sbjct: 181 EAEQQQLIDDHFLFDKPVSPLLLASGMARDWPDARGIWHNDNKTFLVWINEEDHLRVISM 240
Query: 813 QKGGNMKEVFTRFLHGLTQIETLFKSKNYEFMWNPHLGYILTCPSNLGTGLRAGVHIKLP 992
QKGGNMKEVFTRF GLTQIETLFKSKNYEFMWNPHLGYILTCPSNLGTGLRAGVHIKLP
Sbjct: 241 QKGGNMKEVFTRFCTGLTQIETLFKSKNYEFMWNPHLGYILTCPSNLGTGLRAGVHIKLP 300
Query: 993 HL 998
HL
Sbjct: 301 HL 302
>ref|NP_031736.1| creatine kinase M-type [Mus musculus].
Length = 381
Score = 524 bits (1350), Expect = e-149
Identities = 242/302 (80%), Positives = 272/302 (90%)
Frame = +3
Query: 93 MPFSNSHNTLKLRFPAEDEFPDLSGHNNHMAKVLTPELYAELRAKSTPSGFTLDDVIQTG 272
MPF N+HN KL + ++E+PDLS HNNHMAKVLTP+LY +LR K TPSGFTLDDVIQTG
Sbjct: 1 MPFGNTHNKFKLNYKPQEEYPDLSKHNNHMAKVLTPDLYNKLRDKETPSGFTLDDVIQTG 60
Query: 273 VDNPGHPYIMTVGCVAGDEESYDVFKELFDPIIEDRHGGYKPSDEHKTDLNPDNLQGGDD 452
VDNPGHP+IMTVGCVAGDEESY VFK+LFDPII+DRHGGYKP+D+HKTDLN +NL+GGDD
Sbjct: 61 VDNPGHPFIMTVGCVAGDEESYTVFKDLFDPIIQDRHGGYKPTDKHKTDLNHENLKGGDD 120
Query: 453 LDPNYVLSSRVRTGRSIRGFCLPPHCSRGERRAIEKLAVEALSSLDGDLAGRYYALKSMT 632
LDPNYVLSSRVRTGRSI+G+ LPPHCSRGERRA+EKL+VEAL+SL G+ G+YY LKSMT
Sbjct: 121 LDPNYVLSSRVRTGRSIKGYTLPPHCSRGERRAVEKLSVEALNSLTGEFKGKYYPLKSMT 180
Query: 633 EAEQQQLIDDHFLFDKPVSPLLLASGMARDWPDARGIWHNDNKTFLVWINEEDHLRVISM 812
E EQQQLIDDHFLFDKPVSPLLLASGMARDWPDARGIWHNDNK+FLVW+NEEDHLRVISM
Sbjct: 181 EQEQQQLIDDHFLFDKPVSPLLLASGMARDWPDARGIWHNDNKSFLVWVNEEDHLRVISM 240
Query: 813 QKGGNMKEVFTRFLHGLTQIETLFKSKNYEFMWNPHLGYILTCPSNLGTGLRAGVHIKLP 992
+KGGNMKEVF RF GL +IE +FK + FMWN HLGY+LTCPSNLGTGLR GVH+KL
Sbjct: 241 EKGGNMKEVFRRFCVGLQKIEEIFKKAGHPFMWNEHLGYVLTCPSNLGTGLRGGVHVKLA 300
Query: 993 HL 998
+L
Sbjct: 301 NL 302
>ref|NP_034027.1| creatine kinase U-type, mitochondrial precursor [Mus musculus].
Length = 418
Score = 418 bits (1075), Expect = e-117
Identities = 200/290 (68%), Positives = 232/290 (80%), Gaps = 1/290 (0%)
Frame = +3
Query: 132 FPAEDEFPDLSGHNNHMAKVLTPELYAELRAKSTPSGFTLDDVIQTGVDNPGHPYIMTVG 311
+P E+PDL HNN MA LTP +YA L K+TP+G+TLD IQTGVDNPGHP+I TVG
Sbjct: 48 YPPSAEYPDLRKHNNCMASHLTPAVYARLCDKTTPTGWTLDQCIQTGVDNPGHPFIKTVG 107
Query: 312 CVAGDEESYDVFKELFDPIIEDRHGGYKPSD-EHKTDLNPDNLQGGDDLDPNYVLSSRVR 488
VAGDEE+Y+VF ELFDP+I++RH GY P +H TDL+ ++ G D YVLSSRVR
Sbjct: 108 MVAGDEETYEVFAELFDPVIQERHNGYDPRTMKHTTDLDASKIRSGY-FDERYVLSSRVR 166
Query: 489 TGRSIRGFCLPPHCSRGERRAIEKLAVEALSSLDGDLAGRYYALKSMTEAEQQQLIDDHF 668
TGRSIRG LPP C+R ERR +E++ V+ALS L GDLAGRYY L MTEAEQQQLIDDHF
Sbjct: 167 TGRSIRGLSLPPACTRAERREVERVVVDALSGLKGDLAGRYYRLSEMTEAEQQQLIDDHF 226
Query: 669 LFDKPVSPLLLASGMARDWPDARGIWHNDNKTFLVWINEEDHLRVISMQKGGNMKEVFTR 848
LFDKPVSPLL A+GMARDWPDARGIWHN+ K+FL+W+NEEDH RVISM+KGGNMK VF R
Sbjct: 227 LFDKPVSPLLTAAGMARDWPDARGIWHNNEKSFLIWVNEEDHTRVISMEKGGNMKRVFER 286
Query: 849 FLHGLTQIETLFKSKNYEFMWNPHLGYILTCPSNLGTGLRAGVHIKLPHL 998
F GL ++E L + + +EFMWN LGYILTCPSNLGTGLRAGVHIKLP L
Sbjct: 287 FCRGLKEVEKLIQERGWEFMWNERLGYILTCPSNLGTGLRAGVHIKLPLL 336
>ref|NP_940807.1| creatine kinase S-type, mitochondrial precursor [Mus musculus].
Length = 419
Score = 412 bits (1060), Expect = e-115
Identities = 197/290 (67%), Positives = 228/290 (78%), Gaps = 1/290 (0%)
Frame = +3
Query: 132 FPAEDEFPDLSGHNNHMAKVLTPELYAELRAKSTPSGFTLDDVIQTGVDNPGHPYIMTVG 311
FP ++PDL HNN MA+ LTP +YA+LR K TPSG+TLD IQTGVDNPGHP+I TVG
Sbjct: 48 FPPSADYPDLRKHNNCMAECLTPTIYAKLRNKMTPSGYTLDQCIQTGVDNPGHPFIKTVG 107
Query: 312 CVAGDEESYDVFKELFDPIIEDRHGGYKPSD-EHKTDLNPDNLQGGDDLDPNYVLSSRVR 488
VAGDEESY+VF +LFDP+I+ RH GY P +H TDL+ + G D YVLSSRVR
Sbjct: 108 MVAGDEESYEVFADLFDPVIKLRHNGYDPRVMKHPTDLDASKITHGQ-FDERYVLSSRVR 166
Query: 489 TGRSIRGFCLPPHCSRGERRAIEKLAVEALSSLDGDLAGRYYALKSMTEAEQQQLIDDHF 668
TGRSIRG LPP CSR ERR +E +A+ AL L GDLAGRYY L MTE +QQ+LIDDHF
Sbjct: 167 TGRSIRGLSLPPACSRAERREVENVAITALEGLKGDLAGRYYKLSEMTEQDQQRLIDDHF 226
Query: 669 LFDKPVSPLLLASGMARDWPDARGIWHNDNKTFLVWINEEDHLRVISMQKGGNMKEVFTR 848
LFDKPVSPLL +GMARDWPDARGIWHN +KTFL+WINEEDH RVISM+KGGNMK VF R
Sbjct: 227 LFDKPVSPLLTCAGMARDWPDARGIWHNYDKTFLIWINEEDHTRVISMEKGGNMKRVFER 286
Query: 849 FLHGLTQIETLFKSKNYEFMWNPHLGYILTCPSNLGTGLRAGVHIKLPHL 998
F GL ++E L + + +EFMWN LGYILTCPSNLGTGLRAGVH+++P L
Sbjct: 287 FCRGLKEVERLIQERGWEFMWNERLGYILTCPSNLGTGLRAGVHVRIPKL 336
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 32,626,059
Number of extensions: 913107
Number of successful extensions: 4062
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 4003
Number of HSP's successfully gapped: 4
Length of query: 349
Length of database: 15,617,559
Length adjustment: 102
Effective length of query: 247
Effective length of database: 12,553,887
Effective search space: 3100810089
Effective search space used: 3100810089
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002009
(1047 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001230504.1| creatine kinase, brain [Sus scrofa]. 625 e-180
Alignment gi|NP_001123421.1| creatine kinase M-type [Sus scrofa]. 525 e-149
Alignment gi|XP_003121596.1| PREDICTED: creatine kinase U-type, mitochond... 419 e-117
Alignment gi|XP_003121595.1| PREDICTED: creatine kinase U-type, mitochond... 419 e-117
Alignment gi|NP_001038016.1| creatine kinase S-type, mitochondrial [Sus s... 410 e-115
Alignment gi|XP_003361996.1| PREDICTED: creatine kinase B-type-like, part... 152 2e-37
>ref|NP_001230504.1| creatine kinase, brain [Sus scrofa].
Length = 381
Score = 625 bits (1613), Expect = e-180
Identities = 299/302 (99%), Positives = 300/302 (99%)
Frame = +3
Query: 93 MPFSNSHNTLKLRFPAEDEFPDLSGHNNHMAKVLTPELYAELRAKSTPSGFTLDDVIQTG 272
MPFSNSHNTLKLRFPAEDEFPDLSGHNNHMAKVLTPELYAELRAKSTPSGFTLDDVIQ G
Sbjct: 1 MPFSNSHNTLKLRFPAEDEFPDLSGHNNHMAKVLTPELYAELRAKSTPSGFTLDDVIQAG 60
Query: 273 VDNPGHPYIMTVGCVAGDEESYDVFKELFDPIIEDRHGGYKPSDEHKTDLNPDNLQGGDD 452
VDNPGHPYIMTVGCVAGDEESYDVFKELFDPIIEDRHGGYKPSDEHKTDLNPDNLQGGDD
Sbjct: 61 VDNPGHPYIMTVGCVAGDEESYDVFKELFDPIIEDRHGGYKPSDEHKTDLNPDNLQGGDD 120
Query: 453 LDPNYVLSSRVRTGRSIRGFCLPPHCSRGERRAIEKLAVEALSSLDGDLAGRYYALKSMT 632
LDPNYVLSSRVRTGRSIRGFCLPPHCSRGERRAIEKLAVEALSSLDGDLAGRYYALKSMT
Sbjct: 121 LDPNYVLSSRVRTGRSIRGFCLPPHCSRGERRAIEKLAVEALSSLDGDLAGRYYALKSMT 180
Query: 633 EAEQQQLIDDHFLFDKPVSPLLLASGMARDWPDARGIWHNDNKTFLVWINEEDHLRVISM 812
EAEQQQLIDDHFLFDKPVSPLLLASGMARDWPDARGIWHNDNKTFLVWINEEDHLRVISM
Sbjct: 181 EAEQQQLIDDHFLFDKPVSPLLLASGMARDWPDARGIWHNDNKTFLVWINEEDHLRVISM 240
Query: 813 QKGGNMKEVFTRFLHGLTQIETLFKSKNYEFMWNPHLGYILTCPSNLGTGLRAGVHIKLP 992
QKGGNMKEVFTRF +GLTQIETLFKSKNYEFMWNPHLGYILTCPSNLGTGLRAGVHIKLP
Sbjct: 241 QKGGNMKEVFTRFCNGLTQIETLFKSKNYEFMWNPHLGYILTCPSNLGTGLRAGVHIKLP 300
Query: 993 HL 998
HL
Sbjct: 301 HL 302
>ref|NP_001123421.1| creatine kinase M-type [Sus scrofa].
Length = 381
Score = 525 bits (1353), Expect = e-149
Identities = 244/302 (80%), Positives = 271/302 (89%)
Frame = +3
Query: 93 MPFSNSHNTLKLRFPAEDEFPDLSGHNNHMAKVLTPELYAELRAKSTPSGFTLDDVIQTG 272
MPF N+HN KL F AE+E+PDLS HNNHMAK LT E+Y +LR K TPSGFTLDDVIQTG
Sbjct: 1 MPFGNTHNKYKLNFKAEEEYPDLSKHNNHMAKALTLEIYKKLRDKETPSGFTLDDVIQTG 60
Query: 273 VDNPGHPYIMTVGCVAGDEESYDVFKELFDPIIEDRHGGYKPSDEHKTDLNPDNLQGGDD 452
VDNPGHP+IMTVGCVAGDEESY VFK+LFDPII+DRHGGYKP+D+HKTDLN +NL+GGDD
Sbjct: 61 VDNPGHPFIMTVGCVAGDEESYVVFKDLFDPIIQDRHGGYKPTDKHKTDLNHENLKGGDD 120
Query: 453 LDPNYVLSSRVRTGRSIRGFCLPPHCSRGERRAIEKLAVEALSSLDGDLAGRYYALKSMT 632
LDPNYVLSSRVRTGRSI+G+ LPPHCSRGERRA+EKL+VEAL+SL G+ G+YY LKSMT
Sbjct: 121 LDPNYVLSSRVRTGRSIKGYTLPPHCSRGERRAVEKLSVEALNSLTGEFKGKYYPLKSMT 180
Query: 633 EAEQQQLIDDHFLFDKPVSPLLLASGMARDWPDARGIWHNDNKTFLVWINEEDHLRVISM 812
E EQQQLIDDHFLFDKPVSPLLLASGMARDWPDARGIWHNDNK+FLVW+NEEDHLRVISM
Sbjct: 181 EQEQQQLIDDHFLFDKPVSPLLLASGMARDWPDARGIWHNDNKSFLVWVNEEDHLRVISM 240
Query: 813 QKGGNMKEVFTRFLHGLTQIETLFKSKNYEFMWNPHLGYILTCPSNLGTGLRAGVHIKLP 992
+KGGNMKEVF RF GL +IE +FK + FMWN HLGY+LTCPSNLGTGLR GVH+KL
Sbjct: 241 EKGGNMKEVFRRFCVGLQKIEEIFKKAGHPFMWNEHLGYVLTCPSNLGTGLRGGVHVKLA 300
Query: 993 HL 998
HL
Sbjct: 301 HL 302
>ref|XP_003121596.1| PREDICTED: creatine kinase U-type, mitochondrial-like isoform 2
[Sus scrofa].
Length = 416
Score = 419 bits (1076), Expect = e-117
Identities = 200/290 (68%), Positives = 233/290 (80%), Gaps = 1/290 (0%)
Frame = +3
Query: 132 FPAEDEFPDLSGHNNHMAKVLTPELYAELRAKSTPSGFTLDDVIQTGVDNPGHPYIMTVG 311
+P E+PDL HNN MA LTP +YA L K+TP+G+TLD IQTGVDNPGHP+I TVG
Sbjct: 47 YPPSAEYPDLRKHNNCMASHLTPAVYARLCDKTTPTGWTLDQCIQTGVDNPGHPFIKTVG 106
Query: 312 CVAGDEESYDVFKELFDPIIEDRHGGYKPSD-EHKTDLNPDNLQGGDDLDPNYVLSSRVR 488
VAGDEE+Y+VF ELFDP+I++RH GY P +H TDL+ ++ G D YVLSSRVR
Sbjct: 107 MVAGDEETYEVFAELFDPVIQERHNGYDPRTMKHTTDLDASKIRSGF-FDERYVLSSRVR 165
Query: 489 TGRSIRGFCLPPHCSRGERRAIEKLAVEALSSLDGDLAGRYYALKSMTEAEQQQLIDDHF 668
TGRSIRG LPP C+R ERR +E++ V+ALS L GDLAGRYY L MTEAEQQQLIDDHF
Sbjct: 166 TGRSIRGLSLPPACTRAERREVERVVVDALSGLKGDLAGRYYRLSEMTEAEQQQLIDDHF 225
Query: 669 LFDKPVSPLLLASGMARDWPDARGIWHNDNKTFLVWINEEDHLRVISMQKGGNMKEVFTR 848
LFDKPVSPLL A+GMARDWPDARGIWHN+ K+FL+W+NEEDH RVISM+KGGNMK+VF R
Sbjct: 226 LFDKPVSPLLTAAGMARDWPDARGIWHNNEKSFLIWVNEEDHTRVISMEKGGNMKKVFER 285
Query: 849 FLHGLTQIETLFKSKNYEFMWNPHLGYILTCPSNLGTGLRAGVHIKLPHL 998
F GL ++E L + + +EFMWN LGYILTCPSNLGTGLRAGVHIKLP L
Sbjct: 286 FCRGLKEVERLIQERGWEFMWNERLGYILTCPSNLGTGLRAGVHIKLPLL 335
>ref|XP_003121595.1| PREDICTED: creatine kinase U-type, mitochondrial-like isoform 1
[Sus scrofa].
Length = 416
Score = 419 bits (1076), Expect = e-117
Identities = 200/290 (68%), Positives = 233/290 (80%), Gaps = 1/290 (0%)
Frame = +3
Query: 132 FPAEDEFPDLSGHNNHMAKVLTPELYAELRAKSTPSGFTLDDVIQTGVDNPGHPYIMTVG 311
+P E+PDL HNN MA LTP +YA L K+TP+G+TLD IQTGVDNPGHP+I TVG
Sbjct: 47 YPPSAEYPDLRKHNNCMASHLTPAVYARLCDKTTPTGWTLDQCIQTGVDNPGHPFIKTVG 106
Query: 312 CVAGDEESYDVFKELFDPIIEDRHGGYKPSD-EHKTDLNPDNLQGGDDLDPNYVLSSRVR 488
VAGDEE+Y+VF ELFDP+I++RH GY P +H TDL+ ++ G D YVLSSRVR
Sbjct: 107 MVAGDEETYEVFAELFDPVIQERHNGYDPRTMKHTTDLDASKIRSGF-FDERYVLSSRVR 165
Query: 489 TGRSIRGFCLPPHCSRGERRAIEKLAVEALSSLDGDLAGRYYALKSMTEAEQQQLIDDHF 668
TGRSIRG LPP C+R ERR +E++ V+ALS L GDLAGRYY L MTEAEQQQLIDDHF
Sbjct: 166 TGRSIRGLSLPPACTRAERREVERVVVDALSGLKGDLAGRYYRLSEMTEAEQQQLIDDHF 225
Query: 669 LFDKPVSPLLLASGMARDWPDARGIWHNDNKTFLVWINEEDHLRVISMQKGGNMKEVFTR 848
LFDKPVSPLL A+GMARDWPDARGIWHN+ K+FL+W+NEEDH RVISM+KGGNMK+VF R
Sbjct: 226 LFDKPVSPLLTAAGMARDWPDARGIWHNNEKSFLIWVNEEDHTRVISMEKGGNMKKVFER 285
Query: 849 FLHGLTQIETLFKSKNYEFMWNPHLGYILTCPSNLGTGLRAGVHIKLPHL 998
F GL ++E L + + +EFMWN LGYILTCPSNLGTGLRAGVHIKLP L
Sbjct: 286 FCRGLKEVERLIQERGWEFMWNERLGYILTCPSNLGTGLRAGVHIKLPLL 335
>ref|NP_001038016.1| creatine kinase S-type, mitochondrial [Sus scrofa].
Length = 419
Score = 410 bits (1053), Expect = e-115
Identities = 195/290 (67%), Positives = 228/290 (78%), Gaps = 1/290 (0%)
Frame = +3
Query: 132 FPAEDEFPDLSGHNNHMAKVLTPELYAELRAKSTPSGFTLDDVIQTGVDNPGHPYIMTVG 311
FP ++PDL HNN MA+ LTP +YA+LR K TP+G+TLD IQTGVDNPGHP+I TVG
Sbjct: 48 FPPSADYPDLRKHNNCMAECLTPAIYAKLRNKVTPNGYTLDQCIQTGVDNPGHPFIKTVG 107
Query: 312 CVAGDEESYDVFKELFDPIIEDRHGGYKPSD-EHKTDLNPDNLQGGDDLDPNYVLSSRVR 488
VAGDEESY+VF +LFDP+I+ RH GY P +H TDL+ + G D YVLSSRVR
Sbjct: 108 MVAGDEESYEVFADLFDPVIKLRHNGYDPRVMKHPTDLDASKITQGQ-FDERYVLSSRVR 166
Query: 489 TGRSIRGFCLPPHCSRGERRAIEKLAVEALSSLDGDLAGRYYALKSMTEAEQQQLIDDHF 668
TGRSIRG LPP C+R ERR +E +A+ AL L GDLAGRYY L MTE +QQ+LIDDHF
Sbjct: 167 TGRSIRGLSLPPACTRAERREVENVAITALEGLKGDLAGRYYKLSEMTEQDQQRLIDDHF 226
Query: 669 LFDKPVSPLLLASGMARDWPDARGIWHNDNKTFLVWINEEDHLRVISMQKGGNMKEVFTR 848
LFDKPVSPLL +GMARDWPDARGIWHN +KTFL+WINEEDH RVISM+KGGNMK VF R
Sbjct: 227 LFDKPVSPLLTCAGMARDWPDARGIWHNYDKTFLIWINEEDHTRVISMEKGGNMKRVFER 286
Query: 849 FLHGLTQIETLFKSKNYEFMWNPHLGYILTCPSNLGTGLRAGVHIKLPHL 998
F GL ++E L + + +EFMWN LGYILTCPSNLGTGLRAGVH+++P L
Sbjct: 287 FCRGLKEVERLIQERGWEFMWNERLGYILTCPSNLGTGLRAGVHVRIPKL 336
>ref|XP_003361996.1| PREDICTED: creatine kinase B-type-like, partial [Sus scrofa].
Length = 70
Score = 152 bits (385), Expect = 2e-37
Identities = 70/70 (100%), Positives = 70/70 (100%)
Frame = +3
Query: 288 HPYIMTVGCVAGDEESYDVFKELFDPIIEDRHGGYKPSDEHKTDLNPDNLQGGDDLDPNY 467
HPYIMTVGCVAGDEESYDVFKELFDPIIEDRHGGYKPSDEHKTDLNPDNLQGGDDLDPNY
Sbjct: 1 HPYIMTVGCVAGDEESYDVFKELFDPIIEDRHGGYKPSDEHKTDLNPDNLQGGDDLDPNY 60
Query: 468 VLSSRVRTGR 497
VLSSRVRTGR
Sbjct: 61 VLSSRVRTGR 70
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 24,836,621
Number of extensions: 749237
Number of successful extensions: 3357
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 3337
Number of HSP's successfully gapped: 6
Length of query: 349
Length of database: 11,343,932
Length adjustment: 100
Effective length of query: 249
Effective length of database: 8,854,232
Effective search space: 2204703768
Effective search space used: 2204703768
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002009
(1047 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|GL895295.1| Sus scrofa unplaced genomic scaffold chrU_scaffol... 327 7e-87
gb|GL896176.1| Sus scrofa unplaced genomic scaffold chrU_scaffol... 313 1e-82
gb|GL896419.1| Sus scrofa unplaced genomic scaffold chrU_scaffol... 141 9e-31
Sscrofa_Chr01 66 4e-08
>gb|GL895295.1| Sus scrofa unplaced genomic scaffold chrU_scaffold3875
Length = 16889
Score = 327 bits (165), Expect = 7e-87
Identities = 178/181 (98%), Gaps = 1/181 (0%)
Strand = Plus / Plus
Query: 868 agatcgaaaccctcttcaagtccaagaactacgagttcatgtggaaccctcacctgggct 927
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1376 agatcgaaaccctcttcaagtccaagaactacgagttcatgtggaaccctcacctgggct 1435
Query: 928 acatcctgacctgcccatccaacttgggcacggggctgcgggcaggtgtgcacatcaagt 987
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 1436 acatcctgacctgcccatccaacctgggcacggggctgcgggcaggtgtgcacatcaagt 1495
Query: 988 tgccccacctgggc-agcacgagaagttccccgaggtgctcaggcggctgcggctccaga 1046
|||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1496 tgccccacctgggcaagcacgagaagttccccgaggtgctcaagcggctgcggctccaga 1555
Query: 1047 a 1047
|
Sbjct: 1556 a 1556
Score = 218 bits (110), Expect = 5e-54
Identities = 124/126 (98%), Gaps = 2/126 (1%)
Strand = Plus / Plus
Query: 745 ggcacaatgacaataagaccttcctggtgtggatcaacgaggaggaccacctgcgggtca 804
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 ggcacaatgacaataagaccttcctggtgtggatcaacgaggaggaccacctgcgggtca 1140
Query: 805 tctccatgcagaaggggggcaacatgaaggaggtgttcacccgcttcctgc-atggcctc 863
|||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||
Sbjct: 1141 tctccatgcagaaggggggcaacatgaaggaggtgttcacccgctt-ctgcaatggcctc 1199
Query: 864 actcag 869
||||||
Sbjct: 1200 actcag 1205
Score = 123 bits (62), Expect = 2e-25
Identities = 62/62 (100%)
Strand = Plus / Plus
Query: 685 tgtcgcccctgctgctggcctcgggcatggcccgcgactggcccgatgcccgcggcatct 744
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 178 tgtcgcccctgctgctggcctcgggcatggcccgcgactggcccgatgcccgcggcatct 237
Query: 745 gg 746
||
Sbjct: 238 gg 239
>gb|GL896176.1| Sus scrofa unplaced genomic scaffold chrU_scaffold542
Length = 680
Score = 313 bits (158), Expect = 1e-82
Identities = 158/158 (100%)
Strand = Plus / Minus
Query: 284 aggccacccctatatcatgactgtgggctgcgttgctggcgacgaggagtcgtatgacgt 343
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 aggccacccctatatcatgactgtgggctgcgttgctggcgacgaggagtcgtatgacgt 236
Query: 344 gttcaaggaactctttgaccccatcattgaggaccggcacggcggctacaagcctagcga 403
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 235 gttcaaggaactctttgaccccatcattgaggaccggcacggcggctacaagcctagcga 176
Query: 404 tgagcacaagaccgatctcaacccagacaaccttcagg 441
||||||||||||||||||||||||||||||||||||||
Sbjct: 175 tgagcacaagaccgatctcaacccagacaaccttcagg 138
Score = 133 bits (67), Expect = 2e-28
Identities = 67/67 (100%)
Strand = Plus / Minus
Query: 438 cagggcggcgacgacctggaccccaactacgtgctgagctcgcgggtgcgcacgggccgc 497
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 67 cagggcggcgacgacctggaccccaactacgtgctgagctcgcgggtgcgcacgggccgc 8
Query: 498 agcatcc 504
|||||||
Sbjct: 7 agcatcc 1
Score = 131 bits (66), Expect = 8e-28
Identities = 66/66 (100%)
Strand = Plus / Minus
Query: 98 cttctccaacagccacaacacgctgaagctgcgcttcccggctgaggacgagttccccga 157
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 cttctccaacagccacaacacgctgaagctgcgcttcccggctgaggacgagttccccga 621
Query: 158 cctcag 163
||||||
Sbjct: 620 cctcag 615
>gb|GL896419.1| Sus scrofa unplaced genomic scaffold chrU_scaffold761
Length = 25980
Score = 141 bits (71), Expect = 9e-31
Identities = 110/123 (89%)
Strand = Plus / Plus
Query: 624 agcatgaccgaggcggaacagcagcagctcatcgacgaccacttccttttcgacaagccc 683
|||||||||||| ||| ||||| ||||||||||||||||||||||| || |||||||||
Sbjct: 17372 agcatgaccgagcaggagcagcaacagctcatcgacgaccacttcctgtttgacaagccc 17431
Query: 684 gtgtcgcccctgctgctggcctcgggcatggcccgcgactggcccgatgcccgcggcatc 743
||||| || |||||||||||||| ||||||||||| ||||||||||| || || ||||||
Sbjct: 17432 gtgtccccactgctgctggcctcaggcatggcccgagactggcccgacgcgcgaggcatc 17491
Query: 744 tgg 746
|||
Sbjct: 17492 tgg 17494
Score = 109 bits (55), Expect = 3e-21
Identities = 94/107 (87%)
Strand = Plus / Plus
Query: 745 ggcacaatgacaataagaccttcctggtgtggatcaacgaggaggaccacctgcgggtca 804
||||||||||||| |||| |||||| |||||| | ||||||||||||||||| || ||||
Sbjct: 18933 ggcacaatgacaacaagagcttcctagtgtgggtgaacgaggaggaccacctccgagtca 18992
Query: 805 tctccatgcagaaggggggcaacatgaaggaggtgttcacccgcttc 851
|||||||| |||| || ||||||||||||||||| ||| |||||||
Sbjct: 18993 tctccatggagaaaggaggcaacatgaaggaggttttccgccgcttc 19039
Score = 60.0 bits (30), Expect = 3e-06
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 137 ggctgaggacgagttccccgacctcagcggccacaacaaccacatggccaaggtgctgac 196
||||||||| || | ||| ||||||||| |||||||||||||||||||||| ||||||
Sbjct: 12617 ggctgaggaggaatacccagacctcagcaagcacaacaaccacatggccaaggcgctgac 12676
Query: 197 cc 198
||
Sbjct: 12677 cc 12678
>Sscrofa_Chr01
|| Length = 315321322
Score = 65.9 bits (33), Expect = 4e-08
Identities = 57/65 (87%)
Strand = Plus / Minus
Query: 922 tgggctacatcctgacctgcccatccaacttgggcacggggctgcgggcaggtgtgcaca 981
|||| |||||||||||||| ||||| ||| ||||||| || || |||||||| |||||||
Sbjct: 142683008 tgggatacatcctgacctgtccatctaacctgggcactggacttcgggcaggagtgcaca 142682949
Query: 982 tcaag 986
|||||
Sbjct: 142682948 tcaag 142682944
Score = 61.9 bits (31), Expect = 6e-07
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 261 atccagaccggcgtggacaacccaggccacccctatatcatgactgtgggc 311
|||||||| |||||||||||||| |||||||||| |||| ||||||||||
Sbjct: 142686732 atccagactggcgtggacaaccccggccaccccttcatcaagactgtgggc 142686682
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 20,253,327
Number of extensions: 110
Number of successful extensions: 110
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 109
Number of HSP's successfully gapped: 11
Length of query: 1047
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 1026
Effective length of database: 2,808,413,156
Effective search space: 2881431898056
Effective search space used: 2881431898056
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)