Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002046
(1760 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_851364.1| GNAS complex locus [Bos taurus]. 758 0.0
Alignment gi|NP_001096024.1| guanine nucleotide-binding protein G(olf) su... 638 0.0
Alignment gi|NP_001103452.1| guanine nucleotide-binding protein G(t) subu... 276 5e-74
Alignment gi|NP_776750.1| guanine nucleotide-binding protein G(o) subunit... 271 1e-72
Alignment gi|NP_776751.1| guanine nucleotide-binding protein G(t) subunit... 271 1e-72
Alignment gi|NP_001103472.1| guanine nucleotide-binding protein G(q) subu... 269 5e-72
Alignment gi|NP_776747.1| guanine nucleotide-binding protein subunit alph... 265 1e-70
Alignment gi|NP_001094510.1| guanine nucleotide-binding protein G(i) subu... 264 2e-70
Alignment gi|NP_851365.1| guanine nucleotide-binding protein G(t) subunit... 261 2e-69
Alignment gi|NP_776748.1| guanine nucleotide-binding protein subunit alph... 260 3e-69
>ref|NP_851364.1| GNAS complex locus [Bos taurus].
Length = 394
Score = 758 bits (1956), Expect = 0.0
Identities = 377/394 (95%), Positives = 378/394 (95%), Gaps = 15/394 (3%)
Frame = +2
Query: 272 MGCLGNSKTEDQRNEEKAQREANKKIEKQLQKDKQVYRATHRLLLLGAGESGKSTIVKQM 451
MGCLGNSKTEDQRNEEKAQREANKKIEKQLQKDKQVYRATHRLLLLGAGESGKSTIVKQM
Sbjct: 1 MGCLGNSKTEDQRNEEKAQREANKKIEKQLQKDKQVYRATHRLLLLGAGESGKSTIVKQM 60
Query: 452 RILHVNGFNGD---------------EKATKVQDIKNNLKEAIETIVAAMSNLVPPVELA 586
RILHVNGFNG+ EKATKVQDIKNNLKEAIETIVAAMSNLVPPVELA
Sbjct: 61 RILHVNGFNGEGGEEDPQAARSNSDGEKATKVQDIKNNLKEAIETIVAAMSNLVPPVELA 120
Query: 587 NPENQFRVDYILSVMNVPDFDFPPEFYEHAKALWEDEGVRACYERSNEYQLIDCAQYFLD 766
NPENQFRVDYILSVMNVPDFDFPPEFYEHAKALWEDEGVRACYERSNEYQLIDCAQYFLD
Sbjct: 121 NPENQFRVDYILSVMNVPDFDFPPEFYEHAKALWEDEGVRACYERSNEYQLIDCAQYFLD 180
Query: 767 KIDVIKQADYVPSDQDLLRCRVLTSGIFETKFQVDKVNFHMFDVGGQRDERRKWIQCFND 946
KIDVIKQ DYVPSDQDLLRCRVLTSGIFETKFQVDKVNFHMFDVGGQRDERRKWIQCFND
Sbjct: 181 KIDVIKQDDYVPSDQDLLRCRVLTSGIFETKFQVDKVNFHMFDVGGQRDERRKWIQCFND 240
Query: 947 VTAIIFVVASSSYNMVIREDNQTNRLQEALNLFKSIWNNRWLRTISVILFLNKQDLLAEK 1126
VTAIIFVVASSSYNMVIREDNQTNRLQEALNLFKSIWNNRWLRTISVILFLNKQDLLAEK
Sbjct: 241 VTAIIFVVASSSYNMVIREDNQTNRLQEALNLFKSIWNNRWLRTISVILFLNKQDLLAEK 300
Query: 1127 VLAGKSKIEDYFPEFARYTTPEDATPEPGEDPRVTRAKYFIRDEFLRISTASGDGRHYCY 1306
VLAGKSKIEDYFPEFARYTTPEDATPEPGEDPRVTRAKYFIRDEFLRISTASGDGRHYCY
Sbjct: 301 VLAGKSKIEDYFPEFARYTTPEDATPEPGEDPRVTRAKYFIRDEFLRISTASGDGRHYCY 360
Query: 1307 PHFTCAVDTENIRRVFNDCRDIIQRMHLRQYELL 1408
PHFTCAVDTENIRRVFNDCRDIIQRMHLRQYELL
Sbjct: 361 PHFTCAVDTENIRRVFNDCRDIIQRMHLRQYELL 394
>ref|NP_001096024.1| guanine nucleotide-binding protein G(olf) subunit alpha [Bos taurus].
Length = 380
Score = 638 bits (1645), Expect = 0.0
Identities = 303/380 (79%), Positives = 344/380 (90%), Gaps = 1/380 (0%)
Frame = +2
Query: 272 MGCLGNSKT-EDQRNEEKAQREANKKIEKQLQKDKQVYRATHRLLLLGAGESGKSTIVKQ 448
MGCLGNSKT EDQ +EK +REANKKIEKQLQK++ Y+ATHRLLLLGAGESGKSTIVKQ
Sbjct: 1 MGCLGNSKTSEDQGVDEKERREANKKIEKQLQKERLAYKATHRLLLLGAGESGKSTIVKQ 60
Query: 449 MRILHVNGFNGDEKATKVQDIKNNLKEAIETIVAAMSNLVPPVELANPENQFRVDYILSV 628
MRILHVNGFN +EK K+ DI+ N+K+AI TIV+AMS ++PPV LANPENQ R DYI S+
Sbjct: 61 MRILHVNGFNPEEKKQKILDIRKNVKDAIVTIVSAMSTIIPPVPLANPENQLRSDYIKSI 120
Query: 629 MNVPDFDFPPEFYEHAKALWEDEGVRACYERSNEYQLIDCAQYFLDKIDVIKQADYVPSD 808
+ DF++ EF++H K LW+DEGV+AC+ERSNEYQLIDCAQYFL++ID + DY P+D
Sbjct: 121 APITDFEYSQEFFDHVKKLWDDEGVKACFERSNEYQLIDCAQYFLERIDSVSLVDYTPTD 180
Query: 809 QDLLRCRVLTSGIFETKFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIFVVASSSYN 988
QDLLRCRVLTSGIFET+FQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAII+V A SSYN
Sbjct: 181 QDLLRCRVLTSGIFETRFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIYVAACSSYN 240
Query: 989 MVIREDNQTNRLQEALNLFKSIWNNRWLRTISVILFLNKQDLLAEKVLAGKSKIEDYFPE 1168
MVIREDN TNRL+E+L+LF+SIWNNRWLRTIS+ILFLNKQD+LAEKVLAGKSKIEDYFPE
Sbjct: 241 MVIREDNNTNRLRESLDLFESIWNNRWLRTISIILFLNKQDMLAEKVLAGKSKIEDYFPE 300
Query: 1169 FARYTTPEDATPEPGEDPRVTRAKYFIRDEFLRISTASGDGRHYCYPHFTCAVDTENIRR 1348
+A YT PEDATP+ GEDP+VTRAK+FIRD FLRISTA+GDG+HYCYPHFTCAVDTENIRR
Sbjct: 301 YANYTVPEDATPDAGEDPKVTRAKFFIRDLFLRISTATGDGKHYCYPHFTCAVDTENIRR 360
Query: 1349 VFNDCRDIIQRMHLRQYELL 1408
VFNDCRDIIQRMHL+QYELL
Sbjct: 361 VFNDCRDIIQRMHLKQYELL 380
>ref|NP_001103452.1| guanine nucleotide-binding protein G(t) subunit alpha-3 [Bos taurus].
Length = 354
Score = 276 bits (705), Expect = 5e-74
Identities = 156/362 (43%), Positives = 223/362 (61%), Gaps = 1/362 (0%)
Frame = +2
Query: 311 NEEKAQREANKKIEKQLQKDKQVYRATHRLLLLGAGESGKSTIVKQMRILHVNGFNGDEK 490
+E K + +K++EK+LQ+D + T +LLLLGAGESGKSTIVKQM+I+H NG++ E
Sbjct: 7 SESKESAKRSKELEKKLQEDAERDARTVKLLLLGAGESGKSTIVKQMKIIHKNGYSEQEC 66
Query: 491 ATKVQDIKNNLKEAIETIVAAMSNLVPPVELANPENQFRVDYILSVMN-VPDFDFPPEFY 667
I +N ++I IV AM+ L ++ NP + + ++ N + D PE
Sbjct: 67 MEFKAVIYSNTLQSILAIVKAMATL--EIDYVNPRSAEDQQQLCAMANTLEDGSMTPELA 124
Query: 668 EHAKALWEDEGVRACYERSNEYQLIDCAQYFLDKIDVIKQADYVPSDQDLLRCRVLTSGI 847
E K LW D GV+AC+ER++EYQL D A Y+L+ +D I YVP++QD+L RV T+GI
Sbjct: 125 EIIKRLWRDPGVQACFERASEYQLNDSAAYYLNDLDRIAAPGYVPNEQDVLHSRVKTTGI 184
Query: 848 FETKFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIFVVASSSYNMVIREDNQTNRLQ 1027
ET+F ++F MFDVGGQR ER+KWI CF VT IIF A S+Y+MV+ ED + NR+
Sbjct: 185 IETQFSFKDLHFRMFDVGGQRSERKKWIHCFEGVTCIIFCAALSAYDMVLVEDEEVNRMH 244
Query: 1028 EALNLFKSIWNNRWLRTISVILFLNKQDLLAEKVLAGKSKIEDYFPEFARYTTPEDATPE 1207
E+L+LF SI N+++ T S++LFLNK+DL EKV K + FPE+ T ED
Sbjct: 245 ESLHLFNSICNHKYFATTSIVLFLNKKDLFQEKVT--KVHLSICFPEYTGPNTFED---- 298
Query: 1208 PGEDPRVTRAKYFIRDEFLRISTASGDGRHYCYPHFTCAVDTENIRRVFNDCRDIIQRMH 1387
A +I+++FL ++ D Y H TCA DT+N++ VF+ DII + +
Sbjct: 299 ---------AGNYIKNQFLDLNLKKEDKE--IYSHMTCATDTQNVKFVFDAVTDIIIKEN 347
Query: 1388 LR 1393
L+
Sbjct: 348 LK 349
>ref|NP_776750.1| guanine nucleotide-binding protein G(o) subunit alpha [Bos taurus].
Length = 354
Score = 271 bits (694), Expect = 1e-72
Identities = 161/362 (44%), Positives = 217/362 (59%), Gaps = 2/362 (0%)
Frame = +2
Query: 314 EEKAQREANKKIEKQLQKDKQVYRATHRLLLLGAGESGKSTIVKQMRILHVNGFNGDEKA 493
EE+A E +K IEK L++D +LLLLGAGESGKSTIVKQM+I+H +GF+G++
Sbjct: 8 EERAALERSKAIEKNLKEDGISAAKDVKLLLLGAGESGKSTIVKQMKIIHEDGFSGEDVK 67
Query: 494 TKVQDIKNNLKEAIETIVAAMSNLVPPVELANPENQFRVDYILSVMN-VPDFD-FPPEFY 667
+ +N +++ IV AM L +E + E + + V++ + D + F PE
Sbjct: 68 QYKPVVYSNTIQSLAAIVRAMDTL--GIEYGDKERKADAKMVCDVVSRMEDTEPFSPELL 125
Query: 668 EHAKALWEDEGVRACYERSNEYQLIDCAQYFLDKIDVIKQADYVPSDQDLLRCRVLTSGI 847
LW D G++ C+ RS EYQL D A+Y+LD +D I ADY P++QD+LR RV T+GI
Sbjct: 126 SAMMRLWGDSGIQECFNRSREYQLNDSAKYYLDSLDRIGAADYQPTEQDILRTRVKTTGI 185
Query: 848 FETKFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIFVVASSSYNMVIREDNQTNRLQ 1027
ET F ++F +FDVGGQR ER+KWI CF DVTAIIF VA S Y+ V+ ED TNR+
Sbjct: 186 VETHFTFKNLHFRLFDVGGQRSERKKWIHCFEDVTAIIFCVALSGYDQVLHEDETTNRMH 245
Query: 1028 EALNLFKSIWNNRWLRTISVILFLNKQDLLAEKVLAGKSKIEDYFPEFARYTTPEDATPE 1207
E+L LF SI NN++ IS+ILFLNK+DL EK+ KS + FPE+ T EDA
Sbjct: 246 ESLMLFDSICNNKFFIDISIILFLNKKDLFGEKI--KKSPLTICFPEYTGSNTYEDAAA- 302
Query: 1208 PGEDPRVTRAKYFIRDEFLRISTASGDGRHYCYPHFTCAVDTENIRRVFNDCRDIIQRMH 1387
+I+ +F S + YC H TCA DT NI+ VF+ DII +
Sbjct: 303 ------------YIQAQF-ESKNRSPNKEIYC--HMTCATDTNNIQVVFDAVTDIIIANN 347
Query: 1388 LR 1393
LR
Sbjct: 348 LR 349
>ref|NP_776751.1| guanine nucleotide-binding protein G(t) subunit alpha-2 [Bos taurus].
Length = 354
Score = 271 bits (694), Expect = 1e-72
Identities = 151/361 (41%), Positives = 227/361 (62%), Gaps = 1/361 (0%)
Frame = +2
Query: 314 EEKAQREANKKIEKQLQKDKQVYRATHRLLLLGAGESGKSTIVKQMRILHVNGFNGDEKA 493
E+K + +K++EK+LQ+D T +LLLLGAGESGKSTIVKQM+I+H +G++ +E
Sbjct: 8 EDKELAKRSKELEKKLQEDADKEAKTVKLLLLGAGESGKSTIVKQMKIIHQDGYSPEECL 67
Query: 494 TKVQDIKNNLKEAIETIVAAMSNL-VPPVELANPENQFRVDYILSVMNVPDFDFPPEFYE 670
I N+ ++I I+ AM L + E++ +N +++ + ++ + PPE E
Sbjct: 68 EYKAIIYGNVLQSILAIIRAMPTLGIDYAEVSCVDNGRQLNNLAD--SIEEGTMPPELVE 125
Query: 671 HAKALWEDEGVRACYERSNEYQLIDCAQYFLDKIDVIKQADYVPSDQDLLRCRVLTSGIF 850
+ LW+D GV+AC++R+ EYQL D A Y+L+++D I DY+P++QD+LR RV T+GI
Sbjct: 126 VIRKLWKDGGVQACFDRAAEYQLNDSASYYLNQLDRITAPDYLPNEQDVLRSRVKTTGII 185
Query: 851 ETKFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIFVVASSSYNMVIREDNQTNRLQE 1030
ETKF V +NF MFDVGGQR ER+KWI CF VT IIF A S+Y+MV+ ED++ NR+ E
Sbjct: 186 ETKFSVKDLNFRMFDVGGQRSERKKWIHCFEGVTCIIFCAALSAYDMVLVEDDEVNRMHE 245
Query: 1031 ALNLFKSIWNNRWLRTISVILFLNKQDLLAEKVLAGKSKIEDYFPEFARYTTPEDATPEP 1210
+L+LF SI N+++ S++LFLNK+DL EK+ K + FPE+ + ED
Sbjct: 246 SLHLFNSICNHKFFAATSIVLFLNKKDLFEEKI--KKVHLSICFPEYDGNNSYED----- 298
Query: 1211 GEDPRVTRAKYFIRDEFLRISTASGDGRHYCYPHFTCAVDTENIRRVFNDCRDIIQRMHL 1390
A +I+ +FL ++ Y H TCA DT+N++ VF+ DII + +L
Sbjct: 299 --------AGNYIKSQFLDLNMRKDVKE--IYSHMTCATDTQNVKFVFDAVTDIIIKENL 348
Query: 1391 R 1393
+
Sbjct: 349 K 349
>ref|NP_001103472.1| guanine nucleotide-binding protein G(q) subunit alpha [Bos taurus].
Length = 359
Score = 269 bits (688), Expect = 5e-72
Identities = 148/365 (40%), Positives = 220/365 (60%)
Frame = +2
Query: 314 EEKAQREANKKIEKQLQKDKQVYRATHRLLLLGAGESGKSTIVKQMRILHVNGFNGDEKA 493
E K R N +IE+QL++DK+ R +LLLLG GESGKST +KQMRI+H +G++ ++K
Sbjct: 14 EAKEARRINDEIERQLRRDKRDARRELKLLLLGTGESGKSTFIKQMRIIHGSGYSDEDKR 73
Query: 494 TKVQDIKNNLKEAIETIVAAMSNLVPPVELANPENQFRVDYILSVMNVPDFDFPPEFYEH 673
+ + N+ A++ ++ AM L P + + + ++ + V V F+ P + +
Sbjct: 74 GFTKLVYQNIFTAMQAMIRAMDTLKIPYKYEHNKAHAQLVREVDVEKVSAFENP--YVDA 131
Query: 674 AKALWEDEGVRACYERSNEYQLIDCAQYFLDKIDVIKQADYVPSDQDLLRCRVLTSGIFE 853
K+LW D G++ CY+R EYQL D +Y+L+ +D + Y+P+ QD+LR RV T+GI E
Sbjct: 132 IKSLWNDPGIQECYDRRREYQLSDSTKYYLNDLDRVADPAYLPTQQDVLRVRVPTTGIIE 191
Query: 854 TKFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIFVVASSSYNMVIREDNQTNRLQEA 1033
F + V F M DVGGQR ERRKWI CF +VT+I+F+VA S Y+ V+ E + NR++E+
Sbjct: 192 YPFDLQSVIFRMVDVGGQRSERRKWIHCFENVTSIMFLVALSEYDQVLVESDNENRMEES 251
Query: 1034 LNLFKSIWNNRWLRTISVILFLNKQDLLAEKVLAGKSKIEDYFPEFARYTTPEDATPEPG 1213
LF++I W + SVILFLNK+DLL EK++ S + DYFPE+ G
Sbjct: 252 KALFRTIITYPWFQNSSVILFLNKKDLLEEKIM--YSHLVDYFPEY------------DG 297
Query: 1214 EDPRVTRAKYFIRDEFLRISTASGDGRHYCYPHFTCAVDTENIRRVFNDCRDIIQRMHLR 1393
A+ FI F+ ++ D Y HFTCA DTENIR VF +D I +++L+
Sbjct: 298 PQRDAQAAREFILKMFVDLNP---DSDKIIYSHFTCATDTENIRFVFAAVKDTILQLNLK 354
Query: 1394 QYELL 1408
+Y L+
Sbjct: 355 EYNLV 359
>ref|NP_776747.1| guanine nucleotide-binding protein subunit alpha-11 [Bos taurus].
Length = 353
Score = 265 bits (676), Expect = 1e-70
Identities = 149/366 (40%), Positives = 215/366 (58%)
Frame = +2
Query: 311 NEEKAQREANKKIEKQLQKDKQVYRATHRLLLLGAGESGKSTIVKQMRILHVNGFNGDEK 490
+E K + N +IEKQL++DK+ R +LLLLG GESGKST +KQMRI+H G++ ++K
Sbjct: 7 DEVKESKRINAEIEKQLRRDKRDARRELKLLLLGTGESGKSTFIKQMRIIHGAGYSEEDK 66
Query: 491 ATKVQDIKNNLKEAIETIVAAMSNLVPPVELANPENQFRVDYILSVMNVPDFDFPPEFYE 670
+ + N+ A++ ++ AM L + +N+ I V F +
Sbjct: 67 RGFTKLVYQNIFTAMQAMIRAMETL--KILYKYEQNKANALLIREVDVEKVTTFEHRYVS 124
Query: 671 HAKALWEDEGVRACYERSNEYQLIDCAQYFLDKIDVIKQADYVPSDQDLLRCRVLTSGIF 850
K LW D G++ CY+R EYQL D A+Y+L +D I + Y+P+ QD+LR RV T+GI
Sbjct: 125 AIKTLWNDPGIQECYDRRREYQLSDSAKYYLTDVDRIATSGYLPTQQDVLRVRVPTTGII 184
Query: 851 ETKFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIFVVASSSYNMVIREDNQTNRLQE 1030
E F ++ + F M DVGGQR ERRKWI CF +VT+I+F+VA S Y+ V+ E + NR++E
Sbjct: 185 EYPFDLENIIFRMVDVGGQRSERRKWIHCFENVTSIMFLVALSEYDQVLVESDNENRMEE 244
Query: 1031 ALNLFKSIWNNRWLRTISVILFLNKQDLLAEKVLAGKSKIEDYFPEFARYTTPEDATPEP 1210
+ LF++I W + SVILFLNK+DLL +K+L S + DYFPEF
Sbjct: 245 SKALFRTIVTYPWFQNSSVILFLNKKDLLEDKIL--HSHLVDYFPEF------------D 290
Query: 1211 GEDPRVTRAKYFIRDEFLRISTASGDGRHYCYPHFTCAVDTENIRRVFNDCRDIIQRMHL 1390
G A+ FI F+ ++ D Y HFTCA DTENIR VF +D I +++L
Sbjct: 291 GPQRDAQAAREFILKMFVDLNP---DSDKIIYSHFTCATDTENIRFVFAAVKDTILQLNL 347
Query: 1391 RQYELL 1408
++Y L+
Sbjct: 348 KEYNLV 353
>ref|NP_001094510.1| guanine nucleotide-binding protein G(i) subunit alpha-2 [Bos taurus].
Length = 355
Score = 264 bits (674), Expect = 2e-70
Identities = 150/362 (41%), Positives = 218/362 (60%), Gaps = 2/362 (0%)
Frame = +2
Query: 314 EEKAQREANKKIEKQLQKDKQVYRATHRLLLLGAGESGKSTIVKQMRILHVNGFNGDEKA 493
E+KA E +K I+K L++D + +LLLLGAGESGKSTIVKQM+I+H +G++ +E
Sbjct: 8 EDKAAAERSKMIDKNLREDGEKAAREVKLLLLGAGESGKSTIVKQMKIIHEDGYSEEECR 67
Query: 494 TKVQDIKNNLKEAIETIVAAMSNLVPPVELANPE--NQFRVDYILSVMNVPDFDFPPEFY 667
+ +N ++I IV AM NL ++ A+P + R + LS P +
Sbjct: 68 QYRAVVYSNTIQSIMAIVKAMGNL--QIDFADPSRADDARQLFALSCTAEEQGVLPEDLS 125
Query: 668 EHAKALWEDEGVRACYERSNEYQLIDCAQYFLDKIDVIKQADYVPSDQDLLRCRVLTSGI 847
+ LW D GV+AC+ RS EYQL D A Y+L+ ++ I Q+DY+P+ QD+LR RV T+GI
Sbjct: 126 GVIRRLWADHGVQACFGRSREYQLNDSAAYYLNDLERIAQSDYIPTQQDVLRTRVKTTGI 185
Query: 848 FETKFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIFVVASSSYNMVIREDNQTNRLQ 1027
ET F ++F MFDVGGQR ER+KWI CF VTAIIF VA S+Y++V+ ED + NR+
Sbjct: 186 VETHFTFKDLHFKMFDVGGQRSERKKWIHCFEGVTAIIFCVALSAYDLVLAEDEEMNRMH 245
Query: 1028 EALNLFKSIWNNRWLRTISVILFLNKQDLLAEKVLAGKSKIEDYFPEFARYTTPEDATPE 1207
E++ LF SI NN+W S+ILFLNK+DL EK++ S + FPE+ ++A
Sbjct: 246 ESMKLFDSICNNKWFTDTSIILFLNKKDLFEEKII--HSPLTICFPEYTGANKYDEAAS- 302
Query: 1208 PGEDPRVTRAKYFIRDEFLRISTASGDGRHYCYPHFTCAVDTENIRRVFNDCRDIIQRMH 1387
+I+ +F ++ Y HFTCA DT+N++ VF+ D+I + +
Sbjct: 303 ------------YIQSKFEDLNKRKDTKE--IYTHFTCATDTKNVQFVFDAVTDVIIKNN 348
Query: 1388 LR 1393
L+
Sbjct: 349 LK 350
>ref|NP_851365.1| guanine nucleotide-binding protein G(t) subunit alpha-1 [Bos taurus].
Length = 350
Score = 261 bits (666), Expect = 2e-69
Identities = 146/361 (40%), Positives = 224/361 (62%), Gaps = 1/361 (0%)
Frame = +2
Query: 314 EEKAQREANKKIEKQLQKDKQVYRATHRLLLLGAGESGKSTIVKQMRILHVNGFNGDEKA 493
EEK RE KK+++ +KD + T +LLLLGAGESGKSTIVKQM+I+H +G++ +E
Sbjct: 8 EEKHSRELEKKLKEDAEKDAR----TVKLLLLGAGESGKSTIVKQMKIIHQDGYSLEECL 63
Query: 494 TKVQDIKNNLKEAIETIVAAMSNLVPPVELANPENQFRVDYILSVMN-VPDFDFPPEFYE 670
+ I N ++I IV AM+ L ++ + Q ++ + + + + P E +
Sbjct: 64 EFIAIIYGNTLQSILAIVRAMTTL--NIQYGDSARQDDARKLMHMADTIEEGTMPKEMSD 121
Query: 671 HAKALWEDEGVRACYERSNEYQLIDCAQYFLDKIDVIKQADYVPSDQDLLRCRVLTSGIF 850
+ LW+D G++AC++R++EYQL D A Y+L ++ + YVP++QD+LR RV T+GI
Sbjct: 122 IIQRLWKDSGIQACFDRASEYQLNDSAGYYLSDLERLVTPGYVPTEQDVLRSRVKTTGII 181
Query: 851 ETKFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIFVVASSSYNMVIREDNQTNRLQE 1030
ET+F +NF MFDVGGQR ER+KWI CF VT IIF+ A S+Y+MV+ ED++ NR+ E
Sbjct: 182 ETQFSFKDLNFRMFDVGGQRSERKKWIHCFEGVTCIIFIAALSAYDMVLVEDDEVNRMHE 241
Query: 1031 ALNLFKSIWNNRWLRTISVILFLNKQDLLAEKVLAGKSKIEDYFPEFARYTTPEDATPEP 1210
+L+LF SI N+R+ T S++LFLNK+D+ +EK+ K+ + FP++ T ED
Sbjct: 242 SLHLFNSICNHRYFATTSIVLFLNKKDVFSEKI--KKAHLSICFPDYNGPNTYED----- 294
Query: 1211 GEDPRVTRAKYFIRDEFLRISTASGDGRHYCYPHFTCAVDTENIRRVFNDCRDIIQRMHL 1390
A +I+ +FL ++ Y H TCA DT+N++ VF+ DII + +L
Sbjct: 295 --------AGNYIKVQFLELNMRRDVKE--IYSHMTCATDTQNVKFVFDAVTDIIIKENL 344
Query: 1391 R 1393
+
Sbjct: 345 K 345
>ref|NP_776748.1| guanine nucleotide-binding protein subunit alpha-14 [Bos taurus].
Length = 355
Score = 260 bits (664), Expect = 3e-69
Identities = 150/366 (40%), Positives = 217/366 (59%), Gaps = 1/366 (0%)
Frame = +2
Query: 314 EEKAQREANKKIEKQLQKDKQVYRATHRLLLLGAGESGKSTIVKQMRILHVNGFNGDEKA 493
EEK + + +IE+QL++DK+ R +LLLLG GESGKST +KQMRI+H +G++ +++
Sbjct: 10 EEKESQRISAEIERQLRRDKKDARRELKLLLLGTGESGKSTFIKQMRIIHGSGYSDEDRK 69
Query: 494 TKVQDIKNNLKEAIETIVAAMSNLVPPVELANPENQFRVDYILSVMNVPDFDFPPEFYEH 673
+ + N+ A++ ++ AM L ++ +N+ I V + E
Sbjct: 70 GFTKLVYQNIFTAMQAMIRAMDTL--KIQYVCEQNKENAQLIREVEVDKVSTLSRDQVEA 127
Query: 674 AKALWEDEGVRACYERSNEYQLIDCAQYFLDKIDVIKQADYVPSDQDLLRCRVLTSGIFE 853
K LW+D G++ CY+R EYQL D A+Y+L ID I +VP+ QD+LR RV T+GI E
Sbjct: 128 IKQLWQDPGIQECYDRRREYQLSDSAKYYLTDIDRIAMPAFVPTQQDVLRVRVPTTGIIE 187
Query: 854 TKFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIFVVASSSYNMVIREDNQTNRLQEA 1033
F ++ + F M DVGGQR ERRKWI CF VT+IIF+VA S Y+ V+ E + NR++E+
Sbjct: 188 YPFDLENIIFRMVDVGGQRSERRKWIHCFESVTSIIFLVALSEYDQVLAECDNENRMEES 247
Query: 1034 LNLFKSIWNNRWLRTISVILFLNKQDLLAEKVLAGKSKIEDYFPEFARYTTPEDATPEPG 1213
LFK+I W SVILFLNK+DLL EK++ S + YFPE YT P+
Sbjct: 248 KALFKTIITYPWFLNSSVILFLNKKDLLEEKIM--YSHLISYFPE---YTGPK------- 295
Query: 1214 EDPRVTRAKYFIRDEFLRI-STASGDGRHYCYPHFTCAVDTENIRRVFNDCRDIIQRMHL 1390
+D + RD L++ + D Y HFTCA DTENIR VF +D I +++L
Sbjct: 296 QDVKAA------RDFILKLYQDQNPDKEKVIYSHFTCATDTENIRFVFAAVKDTILQLNL 349
Query: 1391 RQYELL 1408
R++ L+
Sbjct: 350 REFNLV 355
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 49,921,602
Number of extensions: 1322527
Number of successful extensions: 4735
Number of sequences better than 1.0e-05: 20
Number of HSP's gapped: 4668
Number of HSP's successfully gapped: 20
Length of query: 586
Length of database: 17,681,374
Length adjustment: 108
Effective length of query: 478
Effective length of database: 14,107,870
Effective search space: 6743561860
Effective search space used: 6743561860
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002046
(1760 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001003263.1| guanine nucleotide-binding protein G(s) subu... 760 0.0
Alignment gi|XP_860224.1| PREDICTED: similar to Guanine nucleotide-bindin... 641 0.0
Alignment gi|XP_849960.1| PREDICTED: similar to Guanine nucleotide-bindin... 640 0.0
Alignment gi|XP_860262.1| PREDICTED: similar to Guanine nucleotide-bindin... 637 0.0
Alignment gi|XP_860122.1| PREDICTED: similar to Guanine nucleotide-bindin... 627 e-179
Alignment gi|XP_860163.1| PREDICTED: similar to Guanine nucleotide-bindin... 583 e-166
Alignment gi|XP_859905.1| PREDICTED: similar to Guanine nucleotide-bindin... 555 e-158
Alignment gi|XP_860198.1| PREDICTED: similar to Guanine nucleotide-bindin... 549 e-156
Alignment gi|XP_859937.1| PREDICTED: similar to Guanine nucleotide-bindin... 539 e-153
Alignment gi|XP_860012.1| PREDICTED: similar to Guanine nucleotide-bindin... 537 e-152
>ref|NP_001003263.1| guanine nucleotide-binding protein G(s) subunit alpha [Canis lupus
familiaris].
Length = 394
Score = 760 bits (1962), Expect = 0.0
Identities = 378/394 (95%), Positives = 379/394 (96%), Gaps = 15/394 (3%)
Frame = +2
Query: 272 MGCLGNSKTEDQRNEEKAQREANKKIEKQLQKDKQVYRATHRLLLLGAGESGKSTIVKQM 451
MGCLGNSKTEDQRNEEKAQREANKKIEKQLQKDKQVYRATHRLLLLGAGESGKSTIVKQM
Sbjct: 1 MGCLGNSKTEDQRNEEKAQREANKKIEKQLQKDKQVYRATHRLLLLGAGESGKSTIVKQM 60
Query: 452 RILHVNGFNGD---------------EKATKVQDIKNNLKEAIETIVAAMSNLVPPVELA 586
RILHVNGFNG+ EKATKVQDIKNNLKEAIETIVAAMSNLVPPVELA
Sbjct: 61 RILHVNGFNGEGGEEDPQAARSNSDGEKATKVQDIKNNLKEAIETIVAAMSNLVPPVELA 120
Query: 587 NPENQFRVDYILSVMNVPDFDFPPEFYEHAKALWEDEGVRACYERSNEYQLIDCAQYFLD 766
NPENQFRVDYILSVMNVPDFDFPPEFYEHAKALWEDEGVRACYERSNEYQLIDCAQYFLD
Sbjct: 121 NPENQFRVDYILSVMNVPDFDFPPEFYEHAKALWEDEGVRACYERSNEYQLIDCAQYFLD 180
Query: 767 KIDVIKQADYVPSDQDLLRCRVLTSGIFETKFQVDKVNFHMFDVGGQRDERRKWIQCFND 946
KIDVIKQADYVPSDQDLLRCRVLTSGIFETKFQVDKVNFHMFDVGGQRDERRKWIQCFND
Sbjct: 181 KIDVIKQADYVPSDQDLLRCRVLTSGIFETKFQVDKVNFHMFDVGGQRDERRKWIQCFND 240
Query: 947 VTAIIFVVASSSYNMVIREDNQTNRLQEALNLFKSIWNNRWLRTISVILFLNKQDLLAEK 1126
VTAIIFVVASSSYNMVIREDNQTNRLQEALNLFKSIWNNRWLRTISVILFLNKQDLLAEK
Sbjct: 241 VTAIIFVVASSSYNMVIREDNQTNRLQEALNLFKSIWNNRWLRTISVILFLNKQDLLAEK 300
Query: 1127 VLAGKSKIEDYFPEFARYTTPEDATPEPGEDPRVTRAKYFIRDEFLRISTASGDGRHYCY 1306
VLAGKSKIEDYFPEFARYTTPEDATPEPGEDPRVTRAKYFIRDEFLRISTASGDGRHYCY
Sbjct: 301 VLAGKSKIEDYFPEFARYTTPEDATPEPGEDPRVTRAKYFIRDEFLRISTASGDGRHYCY 360
Query: 1307 PHFTCAVDTENIRRVFNDCRDIIQRMHLRQYELL 1408
PHFTCAVDTENIRRVFNDCRDIIQRMHLRQYELL
Sbjct: 361 PHFTCAVDTENIRRVFNDCRDIIQRMHLRQYELL 394
>ref|XP_860224.1| PREDICTED: similar to Guanine nucleotide-binding protein G(olf),
alpha subunit (Adenylate cyclase-stimulating G alpha
protein, olfactory type) isoform 12 [Canis familiaris].
Length = 381
Score = 641 bits (1654), Expect = 0.0
Identities = 308/381 (80%), Positives = 345/381 (90%), Gaps = 2/381 (0%)
Frame = +2
Query: 272 MGCLGNSKT-EDQRNEEKAQREANKKIEKQLQKDKQVYRATHRLLLLGAGESGKSTIVKQ 448
MGCLGNSKT EDQ +EK +REANKKIEKQLQK++ Y+ATHRLLLLGAGESGKSTIVKQ
Sbjct: 1 MGCLGNSKTAEDQGVDEKERREANKKIEKQLQKERLAYKATHRLLLLGAGESGKSTIVKQ 60
Query: 449 MRILHVNGFNGD-EKATKVQDIKNNLKEAIETIVAAMSNLVPPVELANPENQFRVDYILS 625
MRILHVNGFN D EK K+ DI+ N+K+AI TIV+AMS ++PPV LANPENQFR DYI
Sbjct: 61 MRILHVNGFNPDQEKKQKILDIRKNVKDAIVTIVSAMSTIIPPVPLANPENQFRSDYIKI 120
Query: 626 VMNVPDFDFPPEFYEHAKALWEDEGVRACYERSNEYQLIDCAQYFLDKIDVIKQADYVPS 805
N+P DFPPEF++H K LW+DEGV+AC+ERSNEYQLIDCAQYFL++ID + DY P+
Sbjct: 121 ESNIPCSDFPPEFFDHVKKLWDDEGVKACFERSNEYQLIDCAQYFLERIDSVSLVDYTPT 180
Query: 806 DQDLLRCRVLTSGIFETKFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIFVVASSSY 985
DQDLLRCRVLTSGIFET+FQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAII+V A SSY
Sbjct: 181 DQDLLRCRVLTSGIFETRFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIYVAACSSY 240
Query: 986 NMVIREDNQTNRLQEALNLFKSIWNNRWLRTISVILFLNKQDLLAEKVLAGKSKIEDYFP 1165
NMVIREDN TNRL+E+L+LF+SIWNNRWLRTIS+ILFLNKQD+LAEKVLAGKSKIEDYFP
Sbjct: 241 NMVIREDNNTNRLRESLDLFESIWNNRWLRTISIILFLNKQDMLAEKVLAGKSKIEDYFP 300
Query: 1166 EFARYTTPEDATPEPGEDPRVTRAKYFIRDEFLRISTASGDGRHYCYPHFTCAVDTENIR 1345
E+A YT PEDATP+ GEDP+VTRAK+FIRD FLRISTA+GDG+HYCYPHFTCAVDTENIR
Sbjct: 301 EYANYTVPEDATPDAGEDPKVTRAKFFIRDLFLRISTATGDGKHYCYPHFTCAVDTENIR 360
Query: 1346 RVFNDCRDIIQRMHLRQYELL 1408
RVFNDCRDIIQRMHL+QYELL
Sbjct: 361 RVFNDCRDIIQRMHLKQYELL 381
>ref|XP_849960.1| PREDICTED: similar to Guanine nucleotide-binding protein G(olf),
alpha subunit (Adenylate cyclase-stimulating G alpha
protein, olfactory type) isoform 2 [Canis familiaris].
Length = 380
Score = 640 bits (1651), Expect = 0.0
Identities = 304/380 (80%), Positives = 345/380 (90%), Gaps = 1/380 (0%)
Frame = +2
Query: 272 MGCLGNSKT-EDQRNEEKAQREANKKIEKQLQKDKQVYRATHRLLLLGAGESGKSTIVKQ 448
MGCLGNSKT EDQ +EK +REANKKIEKQLQK++ Y+ATHRLLLLGAGESGKSTIVKQ
Sbjct: 1 MGCLGNSKTAEDQGVDEKERREANKKIEKQLQKERLAYKATHRLLLLGAGESGKSTIVKQ 60
Query: 449 MRILHVNGFNGDEKATKVQDIKNNLKEAIETIVAAMSNLVPPVELANPENQFRVDYILSV 628
MRILHVNGFN +EK K+ DI+ N+K+AI TIV+AMS ++PPV LANPENQFR DYI S+
Sbjct: 61 MRILHVNGFNPEEKKQKILDIRKNVKDAIVTIVSAMSTIIPPVPLANPENQFRSDYIKSI 120
Query: 629 MNVPDFDFPPEFYEHAKALWEDEGVRACYERSNEYQLIDCAQYFLDKIDVIKQADYVPSD 808
+ DF++ EF++H K LW+DEGV+AC+ERSNEYQLIDCAQYFL++ID + DY P+D
Sbjct: 121 APITDFEYSQEFFDHVKKLWDDEGVKACFERSNEYQLIDCAQYFLERIDSVSLVDYTPTD 180
Query: 809 QDLLRCRVLTSGIFETKFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIFVVASSSYN 988
QDLLRCRVLTSGIFET+FQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAII+V A SSYN
Sbjct: 181 QDLLRCRVLTSGIFETRFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIYVAACSSYN 240
Query: 989 MVIREDNQTNRLQEALNLFKSIWNNRWLRTISVILFLNKQDLLAEKVLAGKSKIEDYFPE 1168
MVIREDN TNRL+E+L+LF+SIWNNRWLRTIS+ILFLNKQD+LAEKVLAGKSKIEDYFPE
Sbjct: 241 MVIREDNNTNRLRESLDLFESIWNNRWLRTISIILFLNKQDMLAEKVLAGKSKIEDYFPE 300
Query: 1169 FARYTTPEDATPEPGEDPRVTRAKYFIRDEFLRISTASGDGRHYCYPHFTCAVDTENIRR 1348
+A YT PEDATP+ GEDP+VTRAK+FIRD FLRISTA+GDG+HYCYPHFTCAVDTENIRR
Sbjct: 301 YANYTVPEDATPDAGEDPKVTRAKFFIRDLFLRISTATGDGKHYCYPHFTCAVDTENIRR 360
Query: 1349 VFNDCRDIIQRMHLRQYELL 1408
VFNDCRDIIQRMHL+QYELL
Sbjct: 361 VFNDCRDIIQRMHLKQYELL 380
>ref|XP_860262.1| PREDICTED: similar to Guanine nucleotide-binding protein G(olf),
alpha subunit (Adenylate cyclase-stimulating G alpha
protein, olfactory type) isoform 13 [Canis familiaris].
Length = 381
Score = 637 bits (1643), Expect = 0.0
Identities = 305/381 (80%), Positives = 345/381 (90%), Gaps = 2/381 (0%)
Frame = +2
Query: 272 MGCLGNSKT-EDQRNEEKAQREANKKIEKQLQKDKQVYRATHRLLLLGAGESGKSTIVKQ 448
MGCLGNSKT EDQ +EK +REANKKIEKQLQK++ Y+ATHRLLLLGAGESGKSTIVKQ
Sbjct: 1 MGCLGNSKTAEDQGVDEKERREANKKIEKQLQKERLAYKATHRLLLLGAGESGKSTIVKQ 60
Query: 449 MRILHVNGFNGD-EKATKVQDIKNNLKEAIETIVAAMSNLVPPVELANPENQFRVDYILS 625
MRILHVNGFN D EK K+ DI+ N+K+AI TIV+AMS ++PPV LANPENQFR DYI S
Sbjct: 61 MRILHVNGFNPDQEKKQKILDIRKNVKDAIVTIVSAMSTIIPPVPLANPENQFRSDYIKS 120
Query: 626 VMNVPDFDFPPEFYEHAKALWEDEGVRACYERSNEYQLIDCAQYFLDKIDVIKQADYVPS 805
+ + DF++ EF++H K LW+DEGV+AC+ERSNEYQLIDCAQYFL++ID + DY P+
Sbjct: 121 IAPITDFEYSQEFFDHVKKLWDDEGVKACFERSNEYQLIDCAQYFLERIDSVSLVDYTPT 180
Query: 806 DQDLLRCRVLTSGIFETKFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIFVVASSSY 985
DQDLLRCRVLTSGIFET+FQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAII+V A SSY
Sbjct: 181 DQDLLRCRVLTSGIFETRFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIYVAACSSY 240
Query: 986 NMVIREDNQTNRLQEALNLFKSIWNNRWLRTISVILFLNKQDLLAEKVLAGKSKIEDYFP 1165
NMVIREDN TNRL+E+L+LF+SIWNNRWLRTIS+ILFLNKQD+LAEKVLAGKSKIEDYFP
Sbjct: 241 NMVIREDNNTNRLRESLDLFESIWNNRWLRTISIILFLNKQDMLAEKVLAGKSKIEDYFP 300
Query: 1166 EFARYTTPEDATPEPGEDPRVTRAKYFIRDEFLRISTASGDGRHYCYPHFTCAVDTENIR 1345
E+A YT PEDATP+ GEDP+VTRAK+FIRD FLRISTA+GDG+HYCYPHFTCAVDTENIR
Sbjct: 301 EYANYTVPEDATPDAGEDPKVTRAKFFIRDLFLRISTATGDGKHYCYPHFTCAVDTENIR 360
Query: 1346 RVFNDCRDIIQRMHLRQYELL 1408
RVFNDCRDIIQRMHL+QYELL
Sbjct: 361 RVFNDCRDIIQRMHLKQYELL 381
>ref|XP_860122.1| PREDICTED: similar to Guanine nucleotide-binding protein G(olf),
alpha subunit (Adenylate cyclase-stimulating G alpha
protein, olfactory type) isoform 9 [Canis familiaris].
Length = 400
Score = 627 bits (1617), Expect = e-179
Identities = 303/400 (75%), Positives = 345/400 (86%), Gaps = 21/400 (5%)
Frame = +2
Query: 272 MGCLGNSKT-EDQRNEEKAQREANKKIEKQLQKDKQVYRATHRLLLLGAGESGKSTIVKQ 448
MGCLGNSKT EDQ +EK +REANKKIEKQLQK++ Y+ATHRLLLLGAGESGKSTIVKQ
Sbjct: 1 MGCLGNSKTAEDQGVDEKERREANKKIEKQLQKERLAYKATHRLLLLGAGESGKSTIVKQ 60
Query: 449 MRILHVNGFNGDEKATKVQDIKNNLKEAIETIVAAMSNLVPPVELANPENQFRVDYILSV 628
MRILHVNGFN +EK K+ DI+ N+K+AI TIV+AMS ++PPV LANPENQFR DYI S+
Sbjct: 61 MRILHVNGFNPEEKKQKILDIRKNVKDAIVTIVSAMSTIIPPVPLANPENQFRSDYIKSI 120
Query: 629 MNVPDFDFPPEFYEHAKALWEDEGVRACYERSNEYQLIDCAQYFLDKIDVIKQADYVPSD 808
+ DF++ EF++H K LW+DEGV+AC+ERSNEYQLIDCAQYFL++ID + DY P+D
Sbjct: 121 APITDFEYSQEFFDHVKKLWDDEGVKACFERSNEYQLIDCAQYFLERIDSVSLVDYTPTD 180
Query: 809 QDLLRCRVLTSGIFETKFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIFVVASSSYN 988
QDLLRCRVLTSGIFET+FQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAII+V A SSYN
Sbjct: 181 QDLLRCRVLTSGIFETRFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIYVAACSSYN 240
Query: 989 MVIREDNQTNRLQEALNLFKSIWNNRWLRTISVILFLNKQDLLAEKVLAGKSKIEDYFPE 1168
MVIREDN TNRL+E+L+LF+SIWNNRWLRTIS+ILFLNKQD+LAEKVLAGKSKIEDYFPE
Sbjct: 241 MVIREDNNTNRLRESLDLFESIWNNRWLRTISIILFLNKQDMLAEKVLAGKSKIEDYFPE 300
Query: 1169 FARYTTPED--------------------ATPEPGEDPRVTRAKYFIRDEFLRISTASGD 1288
+A YT PED +TP+ GEDP+VTRAK+FIRD FLRISTA+GD
Sbjct: 301 YANYTVPEDGKISELLQQRRKRSSEGDGSSTPDAGEDPKVTRAKFFIRDLFLRISTATGD 360
Query: 1289 GRHYCYPHFTCAVDTENIRRVFNDCRDIIQRMHLRQYELL 1408
G+HYCYPHFTCAVDTENIRRVFNDCRDIIQRMHL+QYELL
Sbjct: 361 GKHYCYPHFTCAVDTENIRRVFNDCRDIIQRMHLKQYELL 400
>ref|XP_860163.1| PREDICTED: similar to Guanine nucleotide-binding protein G(olf),
alpha subunit (Adenylate cyclase-stimulating G alpha
protein, olfactory type) isoform 10 [Canis familiaris].
Length = 353
Score = 583 bits (1502), Expect = e-166
Identities = 283/380 (74%), Positives = 320/380 (84%), Gaps = 1/380 (0%)
Frame = +2
Query: 272 MGCLGNSKT-EDQRNEEKAQREANKKIEKQLQKDKQVYRATHRLLLLGAGESGKSTIVKQ 448
MGCLGNSKT EDQ +EK +REANKKIEKQLQK++ Y+ATHRLLLLGAGESGKSTIVKQ
Sbjct: 1 MGCLGNSKTAEDQGVDEKERREANKKIEKQLQKERLAYKATHRLLLLGAGESGKSTIVKQ 60
Query: 449 MRILHVNGFNGDEKATKVQDIKNNLKEAIETIVAAMSNLVPPVELANPENQFRVDYILSV 628
MRILHVNGFN +EK K+ DI+ N+K+AI TIV+AMS ++PPV LANPENQFR DYI S+
Sbjct: 61 MRILHVNGFNPEEKKQKILDIRKNVKDAIVTIVSAMSTIIPPVPLANPENQFRSDYIKSI 120
Query: 629 MNVPDFDFPPEFYEHAKALWEDEGVRACYERSNEYQLIDCAQYFLDKIDVIKQADYVPSD 808
+ DF++ EF++H K LW+DEGV+AC+ERSNEYQLIDCAQYFL++ID + DY P+D
Sbjct: 121 APITDFEYSQEFFDHVKKLWDDEGVKACFERSNEYQLIDCAQYFLERIDSVSLVDYTPTD 180
Query: 809 QDLLRCRVLTSGIFETKFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIFVVASSSYN 988
QDLLRCRVLTSGIFET+FQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAII+V A SSYN
Sbjct: 181 QDLLRCRVLTSGIFETRFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIYVAACSSYN 240
Query: 989 MVIREDNQTNRLQEALNLFKSIWNNRWLRTISVILFLNKQDLLAEKVLAGKSKIEDYFPE 1168
MVIREDN TNRL+E+L+LF+SIWNNRWLRTIS+ILFLNKQD+LAEKVLAGKSKIEDYFPE
Sbjct: 241 MVIREDNNTNRLRESLDLFESIWNNRWLRTISIILFLNKQDMLAEKVLAGKSKIEDYFPE 300
Query: 1169 FARYTTPEDATPEPGEDPRVTRAKYFIRDEFLRISTASGDGRHYCYPHFTCAVDTENIRR 1348
+A YT PEDAT GDG+HYCYPHFTCAVDTENIRR
Sbjct: 301 YANYTVPEDAT---------------------------GDGKHYCYPHFTCAVDTENIRR 333
Query: 1349 VFNDCRDIIQRMHLRQYELL 1408
VFNDCRDIIQRMHL+QYELL
Sbjct: 334 VFNDCRDIIQRMHLKQYELL 353
>ref|XP_859905.1| PREDICTED: similar to Guanine nucleotide-binding protein G(olf),
alpha subunit (Adenylate cyclase-stimulating G alpha
protein, olfactory type) isoform 3 [Canis familiaris].
Length = 361
Score = 555 bits (1431), Expect = e-158
Identities = 277/380 (72%), Positives = 316/380 (83%), Gaps = 1/380 (0%)
Frame = +2
Query: 272 MGCLGNSKT-EDQRNEEKAQREANKKIEKQLQKDKQVYRATHRLLLLGAGESGKSTIVKQ 448
MGCLGNSKT EDQ +EK +REANKKIEKQLQK++ Y+ATHRLLLLGAGESGKSTIVKQ
Sbjct: 1 MGCLGNSKTAEDQGVDEKERREANKKIEKQLQKERLAYKATHRLLLLGAGESGKSTIVKQ 60
Query: 449 MRILHVNGFNGDEKATKVQDIKNNLKEAIETIVAAMSNLVPPVELANPENQFRVDYILSV 628
MRILHVNGFN +EK K+ DI+ N+K+AI TIV+AMS ++PPV LANPENQFR DYI S+
Sbjct: 61 MRILHVNGFNPEEKKQKILDIRKNVKDAIVTIVSAMSTIIPPVPLANPENQFRSDYIKSI 120
Query: 629 MNVPDFDFPPEFYEHAKALWEDEGVRACYERSNEYQLIDCAQYFLDKIDVIKQADYVPSD 808
+ DF++ EF++H K LW+DEGV+AC+ERSNEYQLIDCAQYFL++ID + DY P+D
Sbjct: 121 APITDFEYSQEFFDHVKKLWDDEGVKACFERSNEYQLIDCAQYFLERIDSVSLVDYTPTD 180
Query: 809 QDLLRCRVLTSGIFETKFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIFVVASSSYN 988
QDLLRCRVLTSGIFET+FQVDKVNF + V R W VTAII+V A SSYN
Sbjct: 181 QDLLRCRVLTSGIFETRFQVDKVNFQVRTV----TPRNNWQL---HVTAIIYVAACSSYN 233
Query: 989 MVIREDNQTNRLQEALNLFKSIWNNRWLRTISVILFLNKQDLLAEKVLAGKSKIEDYFPE 1168
MVIREDN TNRL+E WLRTIS+ILFLNKQD+LAEKVLAGKSKIEDYFPE
Sbjct: 234 MVIREDNNTNRLRE------------WLRTISIILFLNKQDMLAEKVLAGKSKIEDYFPE 281
Query: 1169 FARYTTPEDATPEPGEDPRVTRAKYFIRDEFLRISTASGDGRHYCYPHFTCAVDTENIRR 1348
+A YT PEDATP+ GEDP+VTRAK+FIRD FLRISTA+GDG+HYCYPHFTCAVDTENIRR
Sbjct: 282 YANYTVPEDATPDAGEDPKVTRAKFFIRDLFLRISTATGDGKHYCYPHFTCAVDTENIRR 341
Query: 1349 VFNDCRDIIQRMHLRQYELL 1408
VFNDCRDIIQRMHL+QYELL
Sbjct: 342 VFNDCRDIIQRMHLKQYELL 361
>ref|XP_860198.1| PREDICTED: similar to Guanine nucleotide-binding protein G(olf),
alpha subunit (Adenylate cyclase-stimulating G alpha
protein, olfactory type) isoform 11 [Canis familiaris].
Length = 320
Score = 549 bits (1415), Expect = e-156
Identities = 255/320 (79%), Positives = 291/320 (90%)
Frame = +2
Query: 449 MRILHVNGFNGDEKATKVQDIKNNLKEAIETIVAAMSNLVPPVELANPENQFRVDYILSV 628
MRILHVNGFN +EK K+ DI+ N+K+AI TIV+AMS ++PPV LANPENQFR DYI S+
Sbjct: 1 MRILHVNGFNPEEKKQKILDIRKNVKDAIVTIVSAMSTIIPPVPLANPENQFRSDYIKSI 60
Query: 629 MNVPDFDFPPEFYEHAKALWEDEGVRACYERSNEYQLIDCAQYFLDKIDVIKQADYVPSD 808
+ DF++ EF++H K LW+DEGV+AC+ERSNEYQLIDCAQYFL++ID + DY P+D
Sbjct: 61 APITDFEYSQEFFDHVKKLWDDEGVKACFERSNEYQLIDCAQYFLERIDSVSLVDYTPTD 120
Query: 809 QDLLRCRVLTSGIFETKFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIFVVASSSYN 988
QDLLRCRVLTSGIFET+FQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAII+V A SSYN
Sbjct: 121 QDLLRCRVLTSGIFETRFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIYVAACSSYN 180
Query: 989 MVIREDNQTNRLQEALNLFKSIWNNRWLRTISVILFLNKQDLLAEKVLAGKSKIEDYFPE 1168
MVIREDN TNRL+E+L+LF+SIWNNRWLRTIS+ILFLNKQD+LAEKVLAGKSKIEDYFPE
Sbjct: 181 MVIREDNNTNRLRESLDLFESIWNNRWLRTISIILFLNKQDMLAEKVLAGKSKIEDYFPE 240
Query: 1169 FARYTTPEDATPEPGEDPRVTRAKYFIRDEFLRISTASGDGRHYCYPHFTCAVDTENIRR 1348
+A YT PEDATP+ GEDP+VTRAK+FIRD FLRISTA+GDG+HYCYPHFTCAVDTENIRR
Sbjct: 241 YANYTVPEDATPDAGEDPKVTRAKFFIRDLFLRISTATGDGKHYCYPHFTCAVDTENIRR 300
Query: 1349 VFNDCRDIIQRMHLRQYELL 1408
VFNDCRDIIQRMHL+QYELL
Sbjct: 301 VFNDCRDIIQRMHLKQYELL 320
>ref|XP_859937.1| PREDICTED: similar to Guanine nucleotide-binding protein G(olf),
alpha subunit (Adenylate cyclase-stimulating G alpha
protein, olfactory type) isoform 4 [Canis familiaris].
Length = 319
Score = 539 bits (1388), Expect = e-153
Identities = 252/320 (78%), Positives = 289/320 (90%)
Frame = +2
Query: 449 MRILHVNGFNGDEKATKVQDIKNNLKEAIETIVAAMSNLVPPVELANPENQFRVDYILSV 628
MRILHVNGFN +EK K+ DI+ N+K+AI TIV+AMS ++PPV LANPENQFR DYI S+
Sbjct: 1 MRILHVNGFNPEEKKQKILDIRKNVKDAIVTIVSAMSTIIPPVPLANPENQFRSDYIKSI 60
Query: 629 MNVPDFDFPPEFYEHAKALWEDEGVRACYERSNEYQLIDCAQYFLDKIDVIKQADYVPSD 808
+ DF++ EF++H K LW+DEGV+AC+ERSNEYQLIDCAQYFL++ID + DY P+D
Sbjct: 61 APITDFEYSQEFFDHVKKLWDDEGVKACFERSNEYQLIDCAQYFLERIDSVSLVDYTPTD 120
Query: 809 QDLLRCRVLTSGIFETKFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIFVVASSSYN 988
QDLLRCRVLTSGIFET+FQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAII+V A SSYN
Sbjct: 121 QDLLRCRVLTSGIFETRFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIYVAACSSYN 180
Query: 989 MVIREDNQTNRLQEALNLFKSIWNNRWLRTISVILFLNKQDLLAEKVLAGKSKIEDYFPE 1168
MVIREDN TNRL+E+L+LF+SIWNNRWLRTIS+ILFLNKQD+LAEKVLAGKSKIEDYFPE
Sbjct: 181 MVIREDNNTNRLRESLDLFESIWNNRWLRTISIILFLNKQDMLAEKVLAGKSKIEDYFPE 240
Query: 1169 FARYTTPEDATPEPGEDPRVTRAKYFIRDEFLRISTASGDGRHYCYPHFTCAVDTENIRR 1348
+A YT PED + + GEDP+VTRAK+FIRD FLRISTA+GDG+HYCYPHFTCAVDTENIRR
Sbjct: 241 YANYTVPEDVS-DAGEDPKVTRAKFFIRDLFLRISTATGDGKHYCYPHFTCAVDTENIRR 299
Query: 1349 VFNDCRDIIQRMHLRQYELL 1408
VFNDCRDIIQRMHL+QYELL
Sbjct: 300 VFNDCRDIIQRMHLKQYELL 319
>ref|XP_860012.1| PREDICTED: similar to Guanine nucleotide-binding protein G(olf),
alpha subunit (Adenylate cyclase-stimulating G alpha
protein, olfactory type) isoform 6 [Canis familiaris].
Length = 324
Score = 537 bits (1384), Expect = e-152
Identities = 253/324 (78%), Positives = 289/324 (89%), Gaps = 4/324 (1%)
Frame = +2
Query: 449 MRILHVNGFNGDEKATKVQDIKNNLKEAIETIVAAMSNLVPPVELANPENQFRVDYILSV 628
MRILHVNGFN +EK K+ DI+ N+K+AI TIV+AMS ++PPV LANPENQFR DYI S+
Sbjct: 1 MRILHVNGFNPEEKKQKILDIRKNVKDAIVTIVSAMSTIIPPVPLANPENQFRSDYIKSI 60
Query: 629 MNVPDFDFPPEFYEHAKALWEDEGVRACYERSNEYQLIDCAQYFLDKIDVIKQADYVPSD 808
+ DF++ EF++H K LW+DEGV+AC+ERSNEYQLIDCAQYFL++ID + DY P+D
Sbjct: 61 APITDFEYSQEFFDHVKKLWDDEGVKACFERSNEYQLIDCAQYFLERIDSVSLVDYTPTD 120
Query: 809 QDLLRCRVLTSGIFETKFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIFVVASSSYN 988
QDLLRCRVLTSGIFET+FQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAII+V A SSYN
Sbjct: 121 QDLLRCRVLTSGIFETRFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIYVAACSSYN 180
Query: 989 MVIREDNQTNRLQEALNLFKSIWNNRWLRTISVILFLNKQDLLAEKVLAGKSKIEDYFPE 1168
MVIREDN TNRL+E+L+LF+SIWNNRWLRTIS+ILFLNKQD+LAEKVLAGKSKIEDYFPE
Sbjct: 181 MVIREDNNTNRLRESLDLFESIWNNRWLRTISIILFLNKQDMLAEKVLAGKSKIEDYFPE 240
Query: 1169 FARYTTPED----ATPEPGEDPRVTRAKYFIRDEFLRISTASGDGRHYCYPHFTCAVDTE 1336
+A YT PED A + GEDP+VTRAK+FIRD FLRISTA+GDG+HYCYPHFTCAVDTE
Sbjct: 241 YANYTVPEDVGDRALLDAGEDPKVTRAKFFIRDLFLRISTATGDGKHYCYPHFTCAVDTE 300
Query: 1337 NIRRVFNDCRDIIQRMHLRQYELL 1408
NIRRVFNDCRDIIQRMHL+QYELL
Sbjct: 301 NIRRVFNDCRDIIQRMHLKQYELL 324
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 51,274,235
Number of extensions: 1192203
Number of successful extensions: 5121
Number of sequences better than 1.0e-05: 34
Number of HSP's gapped: 5026
Number of HSP's successfully gapped: 35
Length of query: 586
Length of database: 18,874,504
Length adjustment: 108
Effective length of query: 478
Effective length of database: 15,274,216
Effective search space: 7301075248
Effective search space used: 7301075248
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002046
(1760 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001070957.1| protein ALEX isoform g [Homo sapiens]. 771 0.0
Alignment gi|NP_536351.1| protein ALEX GNASS [Homo sapiens]. 767 0.0
Alignment gi|NP_000507.1| protein ALEX GNASL [Homo sapiens]. 760 0.0
Alignment gi|NP_001070956.1| protein ALEX isoform f [Homo sapiens]. 759 0.0
Alignment gi|NP_536350.2| protein ALEX XLas [Homo sapiens]. 705 0.0
Alignment gi|NP_002062.1| guanine nucleotide-binding protein G(olf) subun... 635 0.0
Alignment gi|NP_001135811.1| guanine nucleotide-binding protein G(olf) su... 635 0.0
Alignment gi|NP_892023.1| guanine nucleotide-binding protein G(olf) subun... 597 e-171
Alignment gi|NP_001095856.1| guanine nucleotide-binding protein G(t) subu... 273 5e-73
Alignment gi|NP_002063.2| guanine nucleotide-binding protein G(q) subunit... 269 5e-72
>ref|NP_001070957.1| protein ALEX isoform g [Homo sapiens].
Length = 379
Score = 771 bits (1992), Expect = 0.0
Identities = 379/379 (100%), Positives = 379/379 (100%)
Frame = +2
Query: 272 MGCLGNSKTEDQRNEEKAQREANKKIEKQLQKDKQVYRATHRLLLLGAGESGKSTIVKQM 451
MGCLGNSKTEDQRNEEKAQREANKKIEKQLQKDKQVYRATHRLLLLGAGESGKSTIVKQM
Sbjct: 1 MGCLGNSKTEDQRNEEKAQREANKKIEKQLQKDKQVYRATHRLLLLGAGESGKSTIVKQM 60
Query: 452 RILHVNGFNGDEKATKVQDIKNNLKEAIETIVAAMSNLVPPVELANPENQFRVDYILSVM 631
RILHVNGFNGDEKATKVQDIKNNLKEAIETIVAAMSNLVPPVELANPENQFRVDYILSVM
Sbjct: 61 RILHVNGFNGDEKATKVQDIKNNLKEAIETIVAAMSNLVPPVELANPENQFRVDYILSVM 120
Query: 632 NVPDFDFPPEFYEHAKALWEDEGVRACYERSNEYQLIDCAQYFLDKIDVIKQADYVPSDQ 811
NVPDFDFPPEFYEHAKALWEDEGVRACYERSNEYQLIDCAQYFLDKIDVIKQADYVPSDQ
Sbjct: 121 NVPDFDFPPEFYEHAKALWEDEGVRACYERSNEYQLIDCAQYFLDKIDVIKQADYVPSDQ 180
Query: 812 DLLRCRVLTSGIFETKFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIFVVASSSYNM 991
DLLRCRVLTSGIFETKFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIFVVASSSYNM
Sbjct: 181 DLLRCRVLTSGIFETKFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIFVVASSSYNM 240
Query: 992 VIREDNQTNRLQEALNLFKSIWNNRWLRTISVILFLNKQDLLAEKVLAGKSKIEDYFPEF 1171
VIREDNQTNRLQEALNLFKSIWNNRWLRTISVILFLNKQDLLAEKVLAGKSKIEDYFPEF
Sbjct: 241 VIREDNQTNRLQEALNLFKSIWNNRWLRTISVILFLNKQDLLAEKVLAGKSKIEDYFPEF 300
Query: 1172 ARYTTPEDATPEPGEDPRVTRAKYFIRDEFLRISTASGDGRHYCYPHFTCAVDTENIRRV 1351
ARYTTPEDATPEPGEDPRVTRAKYFIRDEFLRISTASGDGRHYCYPHFTCAVDTENIRRV
Sbjct: 301 ARYTTPEDATPEPGEDPRVTRAKYFIRDEFLRISTASGDGRHYCYPHFTCAVDTENIRRV 360
Query: 1352 FNDCRDIIQRMHLRQYELL 1408
FNDCRDIIQRMHLRQYELL
Sbjct: 361 FNDCRDIIQRMHLRQYELL 379
>ref|NP_536351.1| protein ALEX GNASS [Homo sapiens].
Length = 380
Score = 767 bits (1980), Expect = 0.0
Identities = 379/380 (99%), Positives = 379/380 (99%), Gaps = 1/380 (0%)
Frame = +2
Query: 272 MGCLGNSKTEDQRNEEKAQREANKKIEKQLQKDKQVYRATHRLLLLGAGESGKSTIVKQM 451
MGCLGNSKTEDQRNEEKAQREANKKIEKQLQKDKQVYRATHRLLLLGAGESGKSTIVKQM
Sbjct: 1 MGCLGNSKTEDQRNEEKAQREANKKIEKQLQKDKQVYRATHRLLLLGAGESGKSTIVKQM 60
Query: 452 RILHVNGFNGD-EKATKVQDIKNNLKEAIETIVAAMSNLVPPVELANPENQFRVDYILSV 628
RILHVNGFNGD EKATKVQDIKNNLKEAIETIVAAMSNLVPPVELANPENQFRVDYILSV
Sbjct: 61 RILHVNGFNGDSEKATKVQDIKNNLKEAIETIVAAMSNLVPPVELANPENQFRVDYILSV 120
Query: 629 MNVPDFDFPPEFYEHAKALWEDEGVRACYERSNEYQLIDCAQYFLDKIDVIKQADYVPSD 808
MNVPDFDFPPEFYEHAKALWEDEGVRACYERSNEYQLIDCAQYFLDKIDVIKQADYVPSD
Sbjct: 121 MNVPDFDFPPEFYEHAKALWEDEGVRACYERSNEYQLIDCAQYFLDKIDVIKQADYVPSD 180
Query: 809 QDLLRCRVLTSGIFETKFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIFVVASSSYN 988
QDLLRCRVLTSGIFETKFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIFVVASSSYN
Sbjct: 181 QDLLRCRVLTSGIFETKFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIFVVASSSYN 240
Query: 989 MVIREDNQTNRLQEALNLFKSIWNNRWLRTISVILFLNKQDLLAEKVLAGKSKIEDYFPE 1168
MVIREDNQTNRLQEALNLFKSIWNNRWLRTISVILFLNKQDLLAEKVLAGKSKIEDYFPE
Sbjct: 241 MVIREDNQTNRLQEALNLFKSIWNNRWLRTISVILFLNKQDLLAEKVLAGKSKIEDYFPE 300
Query: 1169 FARYTTPEDATPEPGEDPRVTRAKYFIRDEFLRISTASGDGRHYCYPHFTCAVDTENIRR 1348
FARYTTPEDATPEPGEDPRVTRAKYFIRDEFLRISTASGDGRHYCYPHFTCAVDTENIRR
Sbjct: 301 FARYTTPEDATPEPGEDPRVTRAKYFIRDEFLRISTASGDGRHYCYPHFTCAVDTENIRR 360
Query: 1349 VFNDCRDIIQRMHLRQYELL 1408
VFNDCRDIIQRMHLRQYELL
Sbjct: 361 VFNDCRDIIQRMHLRQYELL 380
>ref|NP_000507.1| protein ALEX GNASL [Homo sapiens].
Length = 394
Score = 760 bits (1962), Expect = 0.0
Identities = 378/394 (95%), Positives = 379/394 (96%), Gaps = 15/394 (3%)
Frame = +2
Query: 272 MGCLGNSKTEDQRNEEKAQREANKKIEKQLQKDKQVYRATHRLLLLGAGESGKSTIVKQM 451
MGCLGNSKTEDQRNEEKAQREANKKIEKQLQKDKQVYRATHRLLLLGAGESGKSTIVKQM
Sbjct: 1 MGCLGNSKTEDQRNEEKAQREANKKIEKQLQKDKQVYRATHRLLLLGAGESGKSTIVKQM 60
Query: 452 RILHVNGFNGD---------------EKATKVQDIKNNLKEAIETIVAAMSNLVPPVELA 586
RILHVNGFNG+ EKATKVQDIKNNLKEAIETIVAAMSNLVPPVELA
Sbjct: 61 RILHVNGFNGEGGEEDPQAARSNSDGEKATKVQDIKNNLKEAIETIVAAMSNLVPPVELA 120
Query: 587 NPENQFRVDYILSVMNVPDFDFPPEFYEHAKALWEDEGVRACYERSNEYQLIDCAQYFLD 766
NPENQFRVDYILSVMNVPDFDFPPEFYEHAKALWEDEGVRACYERSNEYQLIDCAQYFLD
Sbjct: 121 NPENQFRVDYILSVMNVPDFDFPPEFYEHAKALWEDEGVRACYERSNEYQLIDCAQYFLD 180
Query: 767 KIDVIKQADYVPSDQDLLRCRVLTSGIFETKFQVDKVNFHMFDVGGQRDERRKWIQCFND 946
KIDVIKQADYVPSDQDLLRCRVLTSGIFETKFQVDKVNFHMFDVGGQRDERRKWIQCFND
Sbjct: 181 KIDVIKQADYVPSDQDLLRCRVLTSGIFETKFQVDKVNFHMFDVGGQRDERRKWIQCFND 240
Query: 947 VTAIIFVVASSSYNMVIREDNQTNRLQEALNLFKSIWNNRWLRTISVILFLNKQDLLAEK 1126
VTAIIFVVASSSYNMVIREDNQTNRLQEALNLFKSIWNNRWLRTISVILFLNKQDLLAEK
Sbjct: 241 VTAIIFVVASSSYNMVIREDNQTNRLQEALNLFKSIWNNRWLRTISVILFLNKQDLLAEK 300
Query: 1127 VLAGKSKIEDYFPEFARYTTPEDATPEPGEDPRVTRAKYFIRDEFLRISTASGDGRHYCY 1306
VLAGKSKIEDYFPEFARYTTPEDATPEPGEDPRVTRAKYFIRDEFLRISTASGDGRHYCY
Sbjct: 301 VLAGKSKIEDYFPEFARYTTPEDATPEPGEDPRVTRAKYFIRDEFLRISTASGDGRHYCY 360
Query: 1307 PHFTCAVDTENIRRVFNDCRDIIQRMHLRQYELL 1408
PHFTCAVDTENIRRVFNDCRDIIQRMHLRQYELL
Sbjct: 361 PHFTCAVDTENIRRVFNDCRDIIQRMHLRQYELL 394
>ref|NP_001070956.1| protein ALEX isoform f [Homo sapiens].
Length = 395
Score = 759 bits (1961), Expect = 0.0
Identities = 378/395 (95%), Positives = 379/395 (95%), Gaps = 16/395 (4%)
Frame = +2
Query: 272 MGCLGNSKTEDQRNEEKAQREANKKIEKQLQKDKQVYRATHRLLLLGAGESGKSTIVKQM 451
MGCLGNSKTEDQRNEEKAQREANKKIEKQLQKDKQVYRATHRLLLLGAGESGKSTIVKQM
Sbjct: 1 MGCLGNSKTEDQRNEEKAQREANKKIEKQLQKDKQVYRATHRLLLLGAGESGKSTIVKQM 60
Query: 452 RILHVNGFNGD----------------EKATKVQDIKNNLKEAIETIVAAMSNLVPPVEL 583
RILHVNGFNG+ EKATKVQDIKNNLKEAIETIVAAMSNLVPPVEL
Sbjct: 61 RILHVNGFNGEGGEEDPQAARSNSDGSEKATKVQDIKNNLKEAIETIVAAMSNLVPPVEL 120
Query: 584 ANPENQFRVDYILSVMNVPDFDFPPEFYEHAKALWEDEGVRACYERSNEYQLIDCAQYFL 763
ANPENQFRVDYILSVMNVPDFDFPPEFYEHAKALWEDEGVRACYERSNEYQLIDCAQYFL
Sbjct: 121 ANPENQFRVDYILSVMNVPDFDFPPEFYEHAKALWEDEGVRACYERSNEYQLIDCAQYFL 180
Query: 764 DKIDVIKQADYVPSDQDLLRCRVLTSGIFETKFQVDKVNFHMFDVGGQRDERRKWIQCFN 943
DKIDVIKQADYVPSDQDLLRCRVLTSGIFETKFQVDKVNFHMFDVGGQRDERRKWIQCFN
Sbjct: 181 DKIDVIKQADYVPSDQDLLRCRVLTSGIFETKFQVDKVNFHMFDVGGQRDERRKWIQCFN 240
Query: 944 DVTAIIFVVASSSYNMVIREDNQTNRLQEALNLFKSIWNNRWLRTISVILFLNKQDLLAE 1123
DVTAIIFVVASSSYNMVIREDNQTNRLQEALNLFKSIWNNRWLRTISVILFLNKQDLLAE
Sbjct: 241 DVTAIIFVVASSSYNMVIREDNQTNRLQEALNLFKSIWNNRWLRTISVILFLNKQDLLAE 300
Query: 1124 KVLAGKSKIEDYFPEFARYTTPEDATPEPGEDPRVTRAKYFIRDEFLRISTASGDGRHYC 1303
KVLAGKSKIEDYFPEFARYTTPEDATPEPGEDPRVTRAKYFIRDEFLRISTASGDGRHYC
Sbjct: 301 KVLAGKSKIEDYFPEFARYTTPEDATPEPGEDPRVTRAKYFIRDEFLRISTASGDGRHYC 360
Query: 1304 YPHFTCAVDTENIRRVFNDCRDIIQRMHLRQYELL 1408
YPHFTCAVDTENIRRVFNDCRDIIQRMHLRQYELL
Sbjct: 361 YPHFTCAVDTENIRRVFNDCRDIIQRMHLRQYELL 395
>ref|NP_536350.2| protein ALEX XLas [Homo sapiens].
Length = 1037
Score = 705 bits (1819), Expect = 0.0
Identities = 349/384 (90%), Positives = 361/384 (94%), Gaps = 15/384 (3%)
Frame = +2
Query: 302 DQRNEEKAQREANKKIEKQLQKDKQVYRATHRLLLLGAGESGKSTIVKQMRILHVNGFNG 481
++R +++A+++ +K I+KQLQ +K Y THRLLLLGAGESGKSTIVKQMRILHVNGFNG
Sbjct: 654 EKRAQKRAEKKRSKLIDKQLQDEKMGYMCTHRLLLLGAGESGKSTIVKQMRILHVNGFNG 713
Query: 482 D---------------EKATKVQDIKNNLKEAIETIVAAMSNLVPPVELANPENQFRVDY 616
+ EKATKVQDIKNNLKEAIETIVAAMSNLVPPVELANPENQFRVDY
Sbjct: 714 EGGEEDPQAARSNSDGEKATKVQDIKNNLKEAIETIVAAMSNLVPPVELANPENQFRVDY 773
Query: 617 ILSVMNVPDFDFPPEFYEHAKALWEDEGVRACYERSNEYQLIDCAQYFLDKIDVIKQADY 796
ILSVMNVPDFDFPPEFYEHAKALWEDEGVRACYERSNEYQLIDCAQYFLDKIDVIKQADY
Sbjct: 774 ILSVMNVPDFDFPPEFYEHAKALWEDEGVRACYERSNEYQLIDCAQYFLDKIDVIKQADY 833
Query: 797 VPSDQDLLRCRVLTSGIFETKFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIFVVAS 976
VPSDQDLLRCRVLTSGIFETKFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIFVVAS
Sbjct: 834 VPSDQDLLRCRVLTSGIFETKFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIFVVAS 893
Query: 977 SSYNMVIREDNQTNRLQEALNLFKSIWNNRWLRTISVILFLNKQDLLAEKVLAGKSKIED 1156
SSYNMVIREDNQTNRLQEALNLFKSIWNNRWLRTISVILFLNKQDLLAEKVLAGKSKIED
Sbjct: 894 SSYNMVIREDNQTNRLQEALNLFKSIWNNRWLRTISVILFLNKQDLLAEKVLAGKSKIED 953
Query: 1157 YFPEFARYTTPEDATPEPGEDPRVTRAKYFIRDEFLRISTASGDGRHYCYPHFTCAVDTE 1336
YFPEFARYTTPEDATPEPGEDPRVTRAKYFIRDEFLRISTASGDGRHYCYPHFTCAVDTE
Sbjct: 954 YFPEFARYTTPEDATPEPGEDPRVTRAKYFIRDEFLRISTASGDGRHYCYPHFTCAVDTE 1013
Query: 1337 NIRRVFNDCRDIIQRMHLRQYELL 1408
NIRRVFNDCRDIIQRMHLRQYELL
Sbjct: 1014 NIRRVFNDCRDIIQRMHLRQYELL 1037
>ref|NP_002062.1| guanine nucleotide-binding protein G(olf) subunit alpha isoform 2
[Homo sapiens].
Length = 381
Score = 635 bits (1639), Expect = 0.0
Identities = 304/381 (79%), Positives = 345/381 (90%), Gaps = 2/381 (0%)
Frame = +2
Query: 272 MGCLG-NSKT-EDQRNEEKAQREANKKIEKQLQKDKQVYRATHRLLLLGAGESGKSTIVK 445
MGCLG NSKT EDQ +EK +REANKKIEKQLQK++ Y+ATHRLLLLGAGESGKSTIVK
Sbjct: 1 MGCLGGNSKTTEDQGVDEKERREANKKIEKQLQKERLAYKATHRLLLLGAGESGKSTIVK 60
Query: 446 QMRILHVNGFNGDEKATKVQDIKNNLKEAIETIVAAMSNLVPPVELANPENQFRVDYILS 625
QMRILHVNGFN +EK K+ DI+ N+K+AI TIV+AMS ++PPV LANPENQFR DYI S
Sbjct: 61 QMRILHVNGFNPEEKKQKILDIRKNVKDAIVTIVSAMSTIIPPVPLANPENQFRSDYIKS 120
Query: 626 VMNVPDFDFPPEFYEHAKALWEDEGVRACYERSNEYQLIDCAQYFLDKIDVIKQADYVPS 805
+ + DF++ EF++H K LW+DEGV+AC+ERSNEYQLIDCAQYFL++ID + DY P+
Sbjct: 121 IAPITDFEYSQEFFDHVKKLWDDEGVKACFERSNEYQLIDCAQYFLERIDSVSLVDYTPT 180
Query: 806 DQDLLRCRVLTSGIFETKFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIFVVASSSY 985
DQDLLRCRVLTSGIFET+FQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAII+V A SSY
Sbjct: 181 DQDLLRCRVLTSGIFETRFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIYVAACSSY 240
Query: 986 NMVIREDNQTNRLQEALNLFKSIWNNRWLRTISVILFLNKQDLLAEKVLAGKSKIEDYFP 1165
NMVIREDN TNRL+E+L+LF+SIWNNRWLRTIS+ILFLNKQD+LAEKVLAGKSKIEDYFP
Sbjct: 241 NMVIREDNNTNRLRESLDLFESIWNNRWLRTISIILFLNKQDMLAEKVLAGKSKIEDYFP 300
Query: 1166 EFARYTTPEDATPEPGEDPRVTRAKYFIRDEFLRISTASGDGRHYCYPHFTCAVDTENIR 1345
E+A YT PEDATP+ GEDP+VTRAK+FIRD FLRISTA+GDG+HYCYPHFTCAVDTENIR
Sbjct: 301 EYANYTVPEDATPDAGEDPKVTRAKFFIRDLFLRISTATGDGKHYCYPHFTCAVDTENIR 360
Query: 1346 RVFNDCRDIIQRMHLRQYELL 1408
RVFNDCRDIIQRMHL+QYELL
Sbjct: 361 RVFNDCRDIIQRMHLKQYELL 381
>ref|NP_001135811.1| guanine nucleotide-binding protein G(olf) subunit alpha isoform 2
[Homo sapiens].
Length = 381
Score = 635 bits (1639), Expect = 0.0
Identities = 304/381 (79%), Positives = 345/381 (90%), Gaps = 2/381 (0%)
Frame = +2
Query: 272 MGCLG-NSKT-EDQRNEEKAQREANKKIEKQLQKDKQVYRATHRLLLLGAGESGKSTIVK 445
MGCLG NSKT EDQ +EK +REANKKIEKQLQK++ Y+ATHRLLLLGAGESGKSTIVK
Sbjct: 1 MGCLGGNSKTTEDQGVDEKERREANKKIEKQLQKERLAYKATHRLLLLGAGESGKSTIVK 60
Query: 446 QMRILHVNGFNGDEKATKVQDIKNNLKEAIETIVAAMSNLVPPVELANPENQFRVDYILS 625
QMRILHVNGFN +EK K+ DI+ N+K+AI TIV+AMS ++PPV LANPENQFR DYI S
Sbjct: 61 QMRILHVNGFNPEEKKQKILDIRKNVKDAIVTIVSAMSTIIPPVPLANPENQFRSDYIKS 120
Query: 626 VMNVPDFDFPPEFYEHAKALWEDEGVRACYERSNEYQLIDCAQYFLDKIDVIKQADYVPS 805
+ + DF++ EF++H K LW+DEGV+AC+ERSNEYQLIDCAQYFL++ID + DY P+
Sbjct: 121 IAPITDFEYSQEFFDHVKKLWDDEGVKACFERSNEYQLIDCAQYFLERIDSVSLVDYTPT 180
Query: 806 DQDLLRCRVLTSGIFETKFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIFVVASSSY 985
DQDLLRCRVLTSGIFET+FQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAII+V A SSY
Sbjct: 181 DQDLLRCRVLTSGIFETRFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIYVAACSSY 240
Query: 986 NMVIREDNQTNRLQEALNLFKSIWNNRWLRTISVILFLNKQDLLAEKVLAGKSKIEDYFP 1165
NMVIREDN TNRL+E+L+LF+SIWNNRWLRTIS+ILFLNKQD+LAEKVLAGKSKIEDYFP
Sbjct: 241 NMVIREDNNTNRLRESLDLFESIWNNRWLRTISIILFLNKQDMLAEKVLAGKSKIEDYFP 300
Query: 1166 EFARYTTPEDATPEPGEDPRVTRAKYFIRDEFLRISTASGDGRHYCYPHFTCAVDTENIR 1345
E+A YT PEDATP+ GEDP+VTRAK+FIRD FLRISTA+GDG+HYCYPHFTCAVDTENIR
Sbjct: 301 EYANYTVPEDATPDAGEDPKVTRAKFFIRDLFLRISTATGDGKHYCYPHFTCAVDTENIR 360
Query: 1346 RVFNDCRDIIQRMHLRQYELL 1408
RVFNDCRDIIQRMHL+QYELL
Sbjct: 361 RVFNDCRDIIQRMHLKQYELL 381
>ref|NP_892023.1| guanine nucleotide-binding protein G(olf) subunit alpha isoform 1
[Homo sapiens].
Length = 458
Score = 597 bits (1540), Expect = e-171
Identities = 281/368 (76%), Positives = 326/368 (88%)
Frame = +2
Query: 305 QRNEEKAQREANKKIEKQLQKDKQVYRATHRLLLLGAGESGKSTIVKQMRILHVNGFNGD 484
+R K R+ ++ I++ L+ K+ + THRLLLLGAGESGKSTIVKQMRILHVNGFN +
Sbjct: 91 EREAVKEARKVSRGIDRMLRDQKRDLQQTHRLLLLGAGESGKSTIVKQMRILHVNGFNPE 150
Query: 485 EKATKVQDIKNNLKEAIETIVAAMSNLVPPVELANPENQFRVDYILSVMNVPDFDFPPEF 664
EK K+ DI+ N+K+AI TIV+AMS ++PPV LANPENQFR DYI S+ + DF++ EF
Sbjct: 151 EKKQKILDIRKNVKDAIVTIVSAMSTIIPPVPLANPENQFRSDYIKSIAPITDFEYSQEF 210
Query: 665 YEHAKALWEDEGVRACYERSNEYQLIDCAQYFLDKIDVIKQADYVPSDQDLLRCRVLTSG 844
++H K LW+DEGV+AC+ERSNEYQLIDCAQYFL++ID + DY P+DQDLLRCRVLTSG
Sbjct: 211 FDHVKKLWDDEGVKACFERSNEYQLIDCAQYFLERIDSVSLVDYTPTDQDLLRCRVLTSG 270
Query: 845 IFETKFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIFVVASSSYNMVIREDNQTNRL 1024
IFET+FQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAII+V A SSYNMVIREDN TNRL
Sbjct: 271 IFETRFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIYVAACSSYNMVIREDNNTNRL 330
Query: 1025 QEALNLFKSIWNNRWLRTISVILFLNKQDLLAEKVLAGKSKIEDYFPEFARYTTPEDATP 1204
+E+L+LF+SIWNNRWLRTIS+ILFLNKQD+LAEKVLAGKSKIEDYFPE+A YT PEDATP
Sbjct: 331 RESLDLFESIWNNRWLRTISIILFLNKQDMLAEKVLAGKSKIEDYFPEYANYTVPEDATP 390
Query: 1205 EPGEDPRVTRAKYFIRDEFLRISTASGDGRHYCYPHFTCAVDTENIRRVFNDCRDIIQRM 1384
+ GEDP+VTRAK+FIRD FLRISTA+GDG+HYCYPHFTCAVDTENIRRVFNDCRDIIQRM
Sbjct: 391 DAGEDPKVTRAKFFIRDLFLRISTATGDGKHYCYPHFTCAVDTENIRRVFNDCRDIIQRM 450
Query: 1385 HLRQYELL 1408
HL+QYELL
Sbjct: 451 HLKQYELL 458
>ref|NP_001095856.1| guanine nucleotide-binding protein G(t) subunit alpha-3 [Homo
sapiens].
Length = 354
Score = 273 bits (697), Expect = 5e-73
Identities = 153/362 (42%), Positives = 224/362 (61%), Gaps = 1/362 (0%)
Frame = +2
Query: 311 NEEKAQREANKKIEKQLQKDKQVYRATHRLLLLGAGESGKSTIVKQMRILHVNGFNGDEK 490
+E K + +K++EK+LQ+D + T +LLLLGAGESGKSTIVKQM+I+H NG++ E
Sbjct: 7 SESKESAKRSKELEKKLQEDAERDARTVKLLLLGAGESGKSTIVKQMKIIHKNGYSEQEC 66
Query: 491 ATKVQDIKNNLKEAIETIVAAMSNLVPPVELANPENQFRVDYILSVMN-VPDFDFPPEFY 667
I +N ++I IV AM+ L ++ NP + + ++ N + D P+
Sbjct: 67 MEFKAVIYSNTLQSILAIVKAMTTL--GIDYVNPRSAEDQRQLYAMANTLEDGGMTPQLA 124
Query: 668 EHAKALWEDEGVRACYERSNEYQLIDCAQYFLDKIDVIKQADYVPSDQDLLRCRVLTSGI 847
E K LW D G++AC+ER++EYQL D A Y+L+ +D I + YVP++QD+L RV T+GI
Sbjct: 125 EVIKRLWRDPGIQACFERASEYQLNDSAAYYLNDLDRITASGYVPNEQDVLHSRVKTTGI 184
Query: 848 FETKFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIFVVASSSYNMVIREDNQTNRLQ 1027
ET+F ++F MFDVGGQR ER+KWI CF VT IIF A S+Y+MV+ ED + NR+
Sbjct: 185 IETQFSFKDLHFRMFDVGGQRSERKKWIHCFEGVTCIIFCAALSAYDMVLVEDEEVNRMH 244
Query: 1028 EALNLFKSIWNNRWLRTISVILFLNKQDLLAEKVLAGKSKIEDYFPEFARYTTPEDATPE 1207
E+L+LF SI N+++ T S++LFLNK+D+ EKV K + FPE+ T ED
Sbjct: 245 ESLHLFNSICNHKYFSTTSIVLFLNKKDIFQEKVT--KVHLSICFPEYTGPNTFED---- 298
Query: 1208 PGEDPRVTRAKYFIRDEFLRISTASGDGRHYCYPHFTCAVDTENIRRVFNDCRDIIQRMH 1387
A +I+++FL ++ D Y H TCA DT+N++ VF+ DII + +
Sbjct: 299 ---------AGNYIKNQFLDLNLKKEDKE--IYSHMTCATDTQNVKFVFDAVTDIIIKEN 347
Query: 1388 LR 1393
L+
Sbjct: 348 LK 349
>ref|NP_002063.2| guanine nucleotide-binding protein G(q) subunit alpha [Homo sapiens].
Length = 359
Score = 269 bits (688), Expect = 5e-72
Identities = 148/365 (40%), Positives = 220/365 (60%)
Frame = +2
Query: 314 EEKAQREANKKIEKQLQKDKQVYRATHRLLLLGAGESGKSTIVKQMRILHVNGFNGDEKA 493
E K R N +IE+QL++DK+ R +LLLLG GESGKST +KQMRI+H +G++ ++K
Sbjct: 14 EAKEARRINDEIERQLRRDKRDARRELKLLLLGTGESGKSTFIKQMRIIHGSGYSDEDKR 73
Query: 494 TKVQDIKNNLKEAIETIVAAMSNLVPPVELANPENQFRVDYILSVMNVPDFDFPPEFYEH 673
+ + N+ A++ ++ AM L P + + + ++ + V V F+ P + +
Sbjct: 74 GFTKLVYQNIFTAMQAMIRAMDTLKIPYKYEHNKAHAQLVREVDVEKVSAFENP--YVDA 131
Query: 674 AKALWEDEGVRACYERSNEYQLIDCAQYFLDKIDVIKQADYVPSDQDLLRCRVLTSGIFE 853
K+LW D G++ CY+R EYQL D +Y+L+ +D + Y+P+ QD+LR RV T+GI E
Sbjct: 132 IKSLWNDPGIQECYDRRREYQLSDSTKYYLNDLDRVADPAYLPTQQDVLRVRVPTTGIIE 191
Query: 854 TKFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIFVVASSSYNMVIREDNQTNRLQEA 1033
F + V F M DVGGQR ERRKWI CF +VT+I+F+VA S Y+ V+ E + NR++E+
Sbjct: 192 YPFDLQSVIFRMVDVGGQRSERRKWIHCFENVTSIMFLVALSEYDQVLVESDNENRMEES 251
Query: 1034 LNLFKSIWNNRWLRTISVILFLNKQDLLAEKVLAGKSKIEDYFPEFARYTTPEDATPEPG 1213
LF++I W + SVILFLNK+DLL EK++ S + DYFPE+ G
Sbjct: 252 KALFRTIITYPWFQNSSVILFLNKKDLLEEKIM--YSHLVDYFPEY------------DG 297
Query: 1214 EDPRVTRAKYFIRDEFLRISTASGDGRHYCYPHFTCAVDTENIRRVFNDCRDIIQRMHLR 1393
A+ FI F+ ++ D Y HFTCA DTENIR VF +D I +++L+
Sbjct: 298 PQRDAQAAREFILKMFVDLNP---DSDKIIYSHFTCATDTENIRFVFAAVKDTILQLNLK 354
Query: 1394 QYELL 1408
+Y L+
Sbjct: 355 EYNLV 359
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 50,125,158
Number of extensions: 1151195
Number of successful extensions: 4712
Number of sequences better than 1.0e-05: 25
Number of HSP's gapped: 4644
Number of HSP's successfully gapped: 25
Length of query: 586
Length of database: 18,297,164
Length adjustment: 108
Effective length of query: 478
Effective length of database: 14,737,052
Effective search space: 7044310856
Effective search space used: 7044310856
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002046
(1760 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001070978.1| protein ALEX isoform g [Mus musculus]. 765 0.0
Alignment gi|NP_963910.1| protein ALEX GNASL [Mus musculus]. 758 0.0
Alignment gi|NP_001070975.1| protein ALEX isoform f [Mus musculus]. 709 0.0
Alignment gi|NP_034439.2| protein ALEX XLas [Mus musculus]. 702 0.0
Alignment gi|NP_034437.1| guanine nucleotide-binding protein G(olf) subun... 636 0.0
Alignment gi|NP_796111.2| guanine nucleotide-binding protein G(olf) subun... 599 e-171
Alignment gi|NP_001074612.1| guanine nucleotide-binding protein G(t) subu... 278 7e-75
Alignment gi|NP_032165.3| guanine nucleotide-binding protein G(q) subunit... 270 3e-72
Alignment gi|NP_032167.1| guanine nucleotide-binding protein G(t) subunit... 266 5e-71
Alignment gi|NP_032164.2| guanine nucleotide-binding protein G(i) subunit... 265 1e-70
>ref|NP_001070978.1| protein ALEX isoform g [Mus musculus].
Length = 380
Score = 765 bits (1975), Expect = 0.0
Identities = 378/380 (99%), Positives = 379/380 (99%), Gaps = 1/380 (0%)
Frame = +2
Query: 272 MGCLGNSKTEDQRNEEKAQREANKKIEKQLQKDKQVYRATHRLLLLGAGESGKSTIVKQM 451
MGCLGNSKTEDQRNEEKAQREANKKIEKQLQKDKQVYRATHRLLLLGAGESGKSTIVKQM
Sbjct: 1 MGCLGNSKTEDQRNEEKAQREANKKIEKQLQKDKQVYRATHRLLLLGAGESGKSTIVKQM 60
Query: 452 RILHVNGFNGD-EKATKVQDIKNNLKEAIETIVAAMSNLVPPVELANPENQFRVDYILSV 628
RILHVNGFNGD EKATKVQDIKNNLKEAIETIVAAMSNLVPPVELANPENQFRVDYILSV
Sbjct: 61 RILHVNGFNGDSEKATKVQDIKNNLKEAIETIVAAMSNLVPPVELANPENQFRVDYILSV 120
Query: 629 MNVPDFDFPPEFYEHAKALWEDEGVRACYERSNEYQLIDCAQYFLDKIDVIKQADYVPSD 808
MNVP+FDFPPEFYEHAKALWEDEGVRACYERSNEYQLIDCAQYFLDKIDVIKQADYVPSD
Sbjct: 121 MNVPNFDFPPEFYEHAKALWEDEGVRACYERSNEYQLIDCAQYFLDKIDVIKQADYVPSD 180
Query: 809 QDLLRCRVLTSGIFETKFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIFVVASSSYN 988
QDLLRCRVLTSGIFETKFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIFVVASSSYN
Sbjct: 181 QDLLRCRVLTSGIFETKFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIFVVASSSYN 240
Query: 989 MVIREDNQTNRLQEALNLFKSIWNNRWLRTISVILFLNKQDLLAEKVLAGKSKIEDYFPE 1168
MVIREDNQTNRLQEALNLFKSIWNNRWLRTISVILFLNKQDLLAEKVLAGKSKIEDYFPE
Sbjct: 241 MVIREDNQTNRLQEALNLFKSIWNNRWLRTISVILFLNKQDLLAEKVLAGKSKIEDYFPE 300
Query: 1169 FARYTTPEDATPEPGEDPRVTRAKYFIRDEFLRISTASGDGRHYCYPHFTCAVDTENIRR 1348
FARYTTPEDATPEPGEDPRVTRAKYFIRDEFLRISTASGDGRHYCYPHFTCAVDTENIRR
Sbjct: 301 FARYTTPEDATPEPGEDPRVTRAKYFIRDEFLRISTASGDGRHYCYPHFTCAVDTENIRR 360
Query: 1349 VFNDCRDIIQRMHLRQYELL 1408
VFNDCRDIIQRMHLRQYELL
Sbjct: 361 VFNDCRDIIQRMHLRQYELL 380
>ref|NP_963910.1| protein ALEX GNASL [Mus musculus].
Length = 394
Score = 758 bits (1957), Expect = 0.0
Identities = 377/394 (95%), Positives = 379/394 (96%), Gaps = 15/394 (3%)
Frame = +2
Query: 272 MGCLGNSKTEDQRNEEKAQREANKKIEKQLQKDKQVYRATHRLLLLGAGESGKSTIVKQM 451
MGCLGNSKTEDQRNEEKAQREANKKIEKQLQKDKQVYRATHRLLLLGAGESGKSTIVKQM
Sbjct: 1 MGCLGNSKTEDQRNEEKAQREANKKIEKQLQKDKQVYRATHRLLLLGAGESGKSTIVKQM 60
Query: 452 RILHVNGFNGD---------------EKATKVQDIKNNLKEAIETIVAAMSNLVPPVELA 586
RILHVNGFNG+ EKATKVQDIKNNLKEAIETIVAAMSNLVPPVELA
Sbjct: 61 RILHVNGFNGEGGEEDPQAARSNSDGEKATKVQDIKNNLKEAIETIVAAMSNLVPPVELA 120
Query: 587 NPENQFRVDYILSVMNVPDFDFPPEFYEHAKALWEDEGVRACYERSNEYQLIDCAQYFLD 766
NPENQFRVDYILSVMNVP+FDFPPEFYEHAKALWEDEGVRACYERSNEYQLIDCAQYFLD
Sbjct: 121 NPENQFRVDYILSVMNVPNFDFPPEFYEHAKALWEDEGVRACYERSNEYQLIDCAQYFLD 180
Query: 767 KIDVIKQADYVPSDQDLLRCRVLTSGIFETKFQVDKVNFHMFDVGGQRDERRKWIQCFND 946
KIDVIKQADYVPSDQDLLRCRVLTSGIFETKFQVDKVNFHMFDVGGQRDERRKWIQCFND
Sbjct: 181 KIDVIKQADYVPSDQDLLRCRVLTSGIFETKFQVDKVNFHMFDVGGQRDERRKWIQCFND 240
Query: 947 VTAIIFVVASSSYNMVIREDNQTNRLQEALNLFKSIWNNRWLRTISVILFLNKQDLLAEK 1126
VTAIIFVVASSSYNMVIREDNQTNRLQEALNLFKSIWNNRWLRTISVILFLNKQDLLAEK
Sbjct: 241 VTAIIFVVASSSYNMVIREDNQTNRLQEALNLFKSIWNNRWLRTISVILFLNKQDLLAEK 300
Query: 1127 VLAGKSKIEDYFPEFARYTTPEDATPEPGEDPRVTRAKYFIRDEFLRISTASGDGRHYCY 1306
VLAGKSKIEDYFPEFARYTTPEDATPEPGEDPRVTRAKYFIRDEFLRISTASGDGRHYCY
Sbjct: 301 VLAGKSKIEDYFPEFARYTTPEDATPEPGEDPRVTRAKYFIRDEFLRISTASGDGRHYCY 360
Query: 1307 PHFTCAVDTENIRRVFNDCRDIIQRMHLRQYELL 1408
PHFTCAVDTENIRRVFNDCRDIIQRMHLRQYELL
Sbjct: 361 PHFTCAVDTENIRRVFNDCRDIIQRMHLRQYELL 394
>ref|NP_001070975.1| protein ALEX isoform f [Mus musculus].
Length = 1119
Score = 709 bits (1830), Expect = 0.0
Identities = 348/370 (94%), Positives = 360/370 (97%), Gaps = 1/370 (0%)
Frame = +2
Query: 302 DQRNEEKAQREANKKIEKQLQKDKQVYRATHRLLLLGAGESGKSTIVKQMRILHVNGFNG 481
+ R +++A ++ +K I+KQL+++K Y THRLLLLGAGESGKSTIVKQMRILHVNGFNG
Sbjct: 750 EMREQKRADKKRSKLIDKQLEEEKMDYMCTHRLLLLGAGESGKSTIVKQMRILHVNGFNG 809
Query: 482 D-EKATKVQDIKNNLKEAIETIVAAMSNLVPPVELANPENQFRVDYILSVMNVPDFDFPP 658
D EKATKVQDIKNNLKEAIETIVAAMSNLVPPVELANPENQFRVDYILSVMNVP+FDFPP
Sbjct: 810 DSEKATKVQDIKNNLKEAIETIVAAMSNLVPPVELANPENQFRVDYILSVMNVPNFDFPP 869
Query: 659 EFYEHAKALWEDEGVRACYERSNEYQLIDCAQYFLDKIDVIKQADYVPSDQDLLRCRVLT 838
EFYEHAKALWEDEGVRACYERSNEYQLIDCAQYFLDKIDVIKQADYVPSDQDLLRCRVLT
Sbjct: 870 EFYEHAKALWEDEGVRACYERSNEYQLIDCAQYFLDKIDVIKQADYVPSDQDLLRCRVLT 929
Query: 839 SGIFETKFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIFVVASSSYNMVIREDNQTN 1018
SGIFETKFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIFVVASSSYNMVIREDNQTN
Sbjct: 930 SGIFETKFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIFVVASSSYNMVIREDNQTN 989
Query: 1019 RLQEALNLFKSIWNNRWLRTISVILFLNKQDLLAEKVLAGKSKIEDYFPEFARYTTPEDA 1198
RLQEALNLFKSIWNNRWLRTISVILFLNKQDLLAEKVLAGKSKIEDYFPEFARYTTPEDA
Sbjct: 990 RLQEALNLFKSIWNNRWLRTISVILFLNKQDLLAEKVLAGKSKIEDYFPEFARYTTPEDA 1049
Query: 1199 TPEPGEDPRVTRAKYFIRDEFLRISTASGDGRHYCYPHFTCAVDTENIRRVFNDCRDIIQ 1378
TPEPGEDPRVTRAKYFIRDEFLRISTASGDGRHYCYPHFTCAVDTENIRRVFNDCRDIIQ
Sbjct: 1050 TPEPGEDPRVTRAKYFIRDEFLRISTASGDGRHYCYPHFTCAVDTENIRRVFNDCRDIIQ 1109
Query: 1379 RMHLRQYELL 1408
RMHLRQYELL
Sbjct: 1110 RMHLRQYELL 1119
>ref|NP_034439.2| protein ALEX XLas [Mus musculus].
Length = 1133
Score = 702 bits (1812), Expect = 0.0
Identities = 347/384 (90%), Positives = 360/384 (93%), Gaps = 15/384 (3%)
Frame = +2
Query: 302 DQRNEEKAQREANKKIEKQLQKDKQVYRATHRLLLLGAGESGKSTIVKQMRILHVNGFNG 481
+ R +++A ++ +K I+KQL+++K Y THRLLLLGAGESGKSTIVKQMRILHVNGFNG
Sbjct: 750 EMREQKRADKKRSKLIDKQLEEEKMDYMCTHRLLLLGAGESGKSTIVKQMRILHVNGFNG 809
Query: 482 D---------------EKATKVQDIKNNLKEAIETIVAAMSNLVPPVELANPENQFRVDY 616
+ EKATKVQDIKNNLKEAIETIVAAMSNLVPPVELANPENQFRVDY
Sbjct: 810 EGGEEDPQAARSNSDGEKATKVQDIKNNLKEAIETIVAAMSNLVPPVELANPENQFRVDY 869
Query: 617 ILSVMNVPDFDFPPEFYEHAKALWEDEGVRACYERSNEYQLIDCAQYFLDKIDVIKQADY 796
ILSVMNVP+FDFPPEFYEHAKALWEDEGVRACYERSNEYQLIDCAQYFLDKIDVIKQADY
Sbjct: 870 ILSVMNVPNFDFPPEFYEHAKALWEDEGVRACYERSNEYQLIDCAQYFLDKIDVIKQADY 929
Query: 797 VPSDQDLLRCRVLTSGIFETKFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIFVVAS 976
VPSDQDLLRCRVLTSGIFETKFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIFVVAS
Sbjct: 930 VPSDQDLLRCRVLTSGIFETKFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIFVVAS 989
Query: 977 SSYNMVIREDNQTNRLQEALNLFKSIWNNRWLRTISVILFLNKQDLLAEKVLAGKSKIED 1156
SSYNMVIREDNQTNRLQEALNLFKSIWNNRWLRTISVILFLNKQDLLAEKVLAGKSKIED
Sbjct: 990 SSYNMVIREDNQTNRLQEALNLFKSIWNNRWLRTISVILFLNKQDLLAEKVLAGKSKIED 1049
Query: 1157 YFPEFARYTTPEDATPEPGEDPRVTRAKYFIRDEFLRISTASGDGRHYCYPHFTCAVDTE 1336
YFPEFARYTTPEDATPEPGEDPRVTRAKYFIRDEFLRISTASGDGRHYCYPHFTCAVDTE
Sbjct: 1050 YFPEFARYTTPEDATPEPGEDPRVTRAKYFIRDEFLRISTASGDGRHYCYPHFTCAVDTE 1109
Query: 1337 NIRRVFNDCRDIIQRMHLRQYELL 1408
NIRRVFNDCRDIIQRMHLRQYELL
Sbjct: 1110 NIRRVFNDCRDIIQRMHLRQYELL 1133
>ref|NP_034437.1| guanine nucleotide-binding protein G(olf) subunit alpha isoform 1
[Mus musculus].
Length = 381
Score = 636 bits (1640), Expect = 0.0
Identities = 302/381 (79%), Positives = 343/381 (90%), Gaps = 2/381 (0%)
Frame = +2
Query: 272 MGCLGNSK--TEDQRNEEKAQREANKKIEKQLQKDKQVYRATHRLLLLGAGESGKSTIVK 445
MGCLGNS EDQ +EK +REANKKIEKQLQK++ Y+ATHRLLLLGAGESGKSTIVK
Sbjct: 1 MGCLGNSSKTAEDQGVDEKERREANKKIEKQLQKERLAYKATHRLLLLGAGESGKSTIVK 60
Query: 446 QMRILHVNGFNGDEKATKVQDIKNNLKEAIETIVAAMSNLVPPVELANPENQFRVDYILS 625
QMRILHVNGFN +EK K+ DI+ N+K+AI TIV+AMS ++PPV LANPENQFR DYI S
Sbjct: 61 QMRILHVNGFNPEEKKQKILDIRKNVKDAIVTIVSAMSTIIPPVPLANPENQFRSDYIKS 120
Query: 626 VMNVPDFDFPPEFYEHAKALWEDEGVRACYERSNEYQLIDCAQYFLDKIDVIKQADYVPS 805
+ + DF++ EF++H K LW+DEGV+AC+ERSNEYQLIDCAQYFL++ID + DY P+
Sbjct: 121 IAPITDFEYSQEFFDHVKKLWDDEGVKACFERSNEYQLIDCAQYFLERIDSVSLVDYTPT 180
Query: 806 DQDLLRCRVLTSGIFETKFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIFVVASSSY 985
DQDLLRCRVLTSGIFET+FQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAII+V A SSY
Sbjct: 181 DQDLLRCRVLTSGIFETRFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIYVAACSSY 240
Query: 986 NMVIREDNQTNRLQEALNLFKSIWNNRWLRTISVILFLNKQDLLAEKVLAGKSKIEDYFP 1165
NMVIREDN TNRL+E+L+LF+SIWNNRWLRTIS+ILFLNKQD+LAEKVLAGKSKIEDYFP
Sbjct: 241 NMVIREDNNTNRLRESLDLFESIWNNRWLRTISIILFLNKQDMLAEKVLAGKSKIEDYFP 300
Query: 1166 EFARYTTPEDATPEPGEDPRVTRAKYFIRDEFLRISTASGDGRHYCYPHFTCAVDTENIR 1345
E+A YT PEDATP+ GEDP+VTRAK+FIRD FLRISTA+GDG+HYCYPHFTCAVDTENIR
Sbjct: 301 EYANYTVPEDATPDAGEDPKVTRAKFFIRDLFLRISTATGDGKHYCYPHFTCAVDTENIR 360
Query: 1346 RVFNDCRDIIQRMHLRQYELL 1408
RVFNDCRDIIQRMHL+QYELL
Sbjct: 361 RVFNDCRDIIQRMHLKQYELL 381
>ref|NP_796111.2| guanine nucleotide-binding protein G(olf) subunit alpha isoform 2
[Mus musculus].
Length = 448
Score = 599 bits (1545), Expect = e-171
Identities = 281/369 (76%), Positives = 328/369 (88%)
Frame = +2
Query: 302 DQRNEEKAQREANKKIEKQLQKDKQVYRATHRLLLLGAGESGKSTIVKQMRILHVNGFNG 481
++R K R+ ++ I++ L++ K+ + THRLLLLGAGESGKSTIVKQMRILHVNGFN
Sbjct: 80 EEREAAKEARKVSRGIDRMLREQKRDLQQTHRLLLLGAGESGKSTIVKQMRILHVNGFNP 139
Query: 482 DEKATKVQDIKNNLKEAIETIVAAMSNLVPPVELANPENQFRVDYILSVMNVPDFDFPPE 661
+EK K+ DI+ N+K+AI TIV+AMS ++PPV LANPENQFR DYI S+ + DF++ E
Sbjct: 140 EEKKQKILDIRKNVKDAIVTIVSAMSTIIPPVPLANPENQFRSDYIKSIAPITDFEYSQE 199
Query: 662 FYEHAKALWEDEGVRACYERSNEYQLIDCAQYFLDKIDVIKQADYVPSDQDLLRCRVLTS 841
F++H K LW+DEGV+AC+ERSNEYQLIDCAQYFL++ID + DY P+DQDLLRCRVLTS
Sbjct: 200 FFDHVKKLWDDEGVKACFERSNEYQLIDCAQYFLERIDSVSLVDYTPTDQDLLRCRVLTS 259
Query: 842 GIFETKFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIFVVASSSYNMVIREDNQTNR 1021
GIFET+FQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAII+V A SSYNMVIREDN TNR
Sbjct: 260 GIFETRFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIYVAACSSYNMVIREDNNTNR 319
Query: 1022 LQEALNLFKSIWNNRWLRTISVILFLNKQDLLAEKVLAGKSKIEDYFPEFARYTTPEDAT 1201
L+E+L+LF+SIWNNRWLRTIS+ILFLNKQD+LAEKVLAGKSKIEDYFPE+A YT PEDAT
Sbjct: 320 LRESLDLFESIWNNRWLRTISIILFLNKQDMLAEKVLAGKSKIEDYFPEYANYTVPEDAT 379
Query: 1202 PEPGEDPRVTRAKYFIRDEFLRISTASGDGRHYCYPHFTCAVDTENIRRVFNDCRDIIQR 1381
P+ GEDP+VTRAK+FIRD FLRISTA+GDG+HYCYPHFTCAVDTENIRRVFNDCRDIIQR
Sbjct: 380 PDAGEDPKVTRAKFFIRDLFLRISTATGDGKHYCYPHFTCAVDTENIRRVFNDCRDIIQR 439
Query: 1382 MHLRQYELL 1408
MHL+QYELL
Sbjct: 440 MHLKQYELL 448
>ref|NP_001074612.1| guanine nucleotide-binding protein G(t) subunit alpha-3 [Mus
musculus].
Length = 354
Score = 278 bits (712), Expect = 7e-75
Identities = 156/362 (43%), Positives = 225/362 (62%), Gaps = 1/362 (0%)
Frame = +2
Query: 311 NEEKAQREANKKIEKQLQKDKQVYRATHRLLLLGAGESGKSTIVKQMRILHVNGFNGDEK 490
+E K +K++EK+LQ+D + T +LLLLGAGESGKSTIVKQM+I+H NG++ E
Sbjct: 7 SESKESARRSKELEKKLQEDAERDARTVKLLLLGAGESGKSTIVKQMKIIHKNGYSKQEC 66
Query: 491 ATKVQDIKNNLKEAIETIVAAMSNLVPPVELANPENQFRVDYILSVMN-VPDFDFPPEFY 667
I +N ++I IV AM+ L ++ NP ++ + + S+ N + D D P+
Sbjct: 67 MEFKAVIYSNTLQSILAIVKAMATL--GIDYVNPRSREDQEQLHSMANTLEDGDMTPQLA 124
Query: 668 EHAKALWEDEGVRACYERSNEYQLIDCAQYFLDKIDVIKQADYVPSDQDLLRCRVLTSGI 847
E K LW D G++AC+ER++EYQL D A Y+L+ +D + YVP++QD+L RV T+GI
Sbjct: 125 EIIKRLWGDPGIQACFERASEYQLNDSAAYYLNDLDRLTAPGYVPNEQDVLHSRVKTTGI 184
Query: 848 FETKFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIFVVASSSYNMVIREDNQTNRLQ 1027
ET+F +NF MFDVGGQR ER+KWI CF VT IIF A S+Y+MV+ ED + NR+
Sbjct: 185 IETQFSFKDLNFRMFDVGGQRSERKKWIHCFEGVTCIIFCAALSAYDMVLVEDEEVNRMH 244
Query: 1028 EALNLFKSIWNNRWLRTISVILFLNKQDLLAEKVLAGKSKIEDYFPEFARYTTPEDATPE 1207
E+L+LF SI N+++ T S++LFLNK+DL EKV K + FPE+ T ED
Sbjct: 245 ESLHLFNSICNHKYFATTSIVLFLNKKDLFQEKV--AKVHLSICFPEYTGPNTFED---- 298
Query: 1208 PGEDPRVTRAKYFIRDEFLRISTASGDGRHYCYPHFTCAVDTENIRRVFNDCRDIIQRMH 1387
A +I+++FL ++ D Y H TCA DT+N++ VF+ DII + +
Sbjct: 299 ---------AGNYIKNQFLDLNLKKEDKE--IYSHMTCATDTQNVKFVFDAVTDIIIKEN 347
Query: 1388 LR 1393
L+
Sbjct: 348 LK 349
>ref|NP_032165.3| guanine nucleotide-binding protein G(q) subunit alpha [Mus musculus].
Length = 359
Score = 270 bits (690), Expect = 3e-72
Identities = 148/365 (40%), Positives = 220/365 (60%)
Frame = +2
Query: 314 EEKAQREANKKIEKQLQKDKQVYRATHRLLLLGAGESGKSTIVKQMRILHVNGFNGDEKA 493
E K R N +IE+QL++DK+ R +LLLLG GESGKST +KQMRI+H +G++ ++K
Sbjct: 14 EAKEARRINDEIERQLRRDKRDARRELKLLLLGTGESGKSTFIKQMRIIHGSGYSDEDKR 73
Query: 494 TKVQDIKNNLKEAIETIVAAMSNLVPPVELANPENQFRVDYILSVMNVPDFDFPPEFYEH 673
+ + N+ A++ ++ AM L P + + + ++ + V V F+ P + +
Sbjct: 74 GFTKLVYQNIFTAMQAMIRAMDTLKIPYKYEHNKAHAQLVREVDVEKVSAFENP--YVDA 131
Query: 674 AKALWEDEGVRACYERSNEYQLIDCAQYFLDKIDVIKQADYVPSDQDLLRCRVLTSGIFE 853
K+LW D G++ CY+R EYQL D +Y+L+ +D + Y+P+ QD+LR RV T+GI E
Sbjct: 132 IKSLWNDPGIQECYDRRREYQLSDSTKYYLNDLDRVADPSYLPTQQDVLRVRVPTTGIIE 191
Query: 854 TKFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIFVVASSSYNMVIREDNQTNRLQEA 1033
F + V F M DVGGQR ERRKWI CF +VT+I+F+VA S Y+ V+ E + NR++E+
Sbjct: 192 YPFDLQSVIFRMVDVGGQRSERRKWIHCFENVTSIMFLVALSEYDQVLVESDNENRMEES 251
Query: 1034 LNLFKSIWNNRWLRTISVILFLNKQDLLAEKVLAGKSKIEDYFPEFARYTTPEDATPEPG 1213
LF++I W + SVILFLNK+DLL EK++ S + DYFPE+ G
Sbjct: 252 KALFRTIITYPWFQNSSVILFLNKKDLLEEKIM--YSHLVDYFPEY------------DG 297
Query: 1214 EDPRVTRAKYFIRDEFLRISTASGDGRHYCYPHFTCAVDTENIRRVFNDCRDIIQRMHLR 1393
A+ FI F+ ++ D Y HFTCA DTENIR VF +D I +++L+
Sbjct: 298 PQRDAQAAREFILKMFVDLNP---DSDKIIYSHFTCATDTENIRFVFAAVKDTILQLNLK 354
Query: 1394 QYELL 1408
+Y L+
Sbjct: 355 EYNLV 359
>ref|NP_032167.1| guanine nucleotide-binding protein G(t) subunit alpha-2 [Mus
musculus].
Length = 354
Score = 266 bits (679), Expect = 5e-71
Identities = 152/364 (41%), Positives = 223/364 (61%), Gaps = 4/364 (1%)
Frame = +2
Query: 314 EEKAQREANKKIEKQLQKDKQVYRATHRLLLLGAGESGKSTIVKQMRILHVNGFNGDEKA 493
E+K +K++EK+LQ+D T +LLLLGAGESGKSTIVKQM+I+H +G++ +E
Sbjct: 8 EDKELARRSKELEKKLQEDADKEAKTVKLLLLGAGESGKSTIVKQMKIIHQDGYSPEECL 67
Query: 494 TKVQDIKNNLKEAIETIVAAMSNLVPPVELANPENQFRVDYILSVMNVPDFD----FPPE 661
I N+ ++I I+ AMS L ++ A P D + N+ D PPE
Sbjct: 68 EFKSVIYGNVLQSILAIIRAMSTL--GIDYAEPSC---ADAGRQLNNLADSTEEGTMPPE 122
Query: 662 FYEHAKALWEDEGVRACYERSNEYQLIDCAQYFLDKIDVIKQADYVPSDQDLLRCRVLTS 841
+ + LW+D GV+AC++R+ E+QL D A Y+L+++D I +Y+P++QD+LR RV T+
Sbjct: 123 LVDVIRKLWKDGGVQACFDRAAEFQLNDSASYYLNQLDRITDPNYLPNEQDVLRSRVKTT 182
Query: 842 GIFETKFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIFVVASSSYNMVIREDNQTNR 1021
GI ETKF V +NF MFDVGGQR ER+KWI CF VT IIF A S+Y+MV+ ED++ NR
Sbjct: 183 GIIETKFSVKDLNFRMFDVGGQRSERKKWIHCFEGVTCIIFCAALSAYDMVLVEDDEVNR 242
Query: 1022 LQEALNLFKSIWNNRWLRTISVILFLNKQDLLAEKVLAGKSKIEDYFPEFARYTTPEDAT 1201
+ E+L+LF SI N+++ S++LFLNK+DL EK+ K + FPE+ + ED
Sbjct: 243 MHESLHLFNSICNHKFFAATSIVLFLNKKDLFEEKI--KKVHLSICFPEYDGNNSYED-- 298
Query: 1202 PEPGEDPRVTRAKYFIRDEFLRISTASGDGRHYCYPHFTCAVDTENIRRVFNDCRDIIQR 1381
A +I+ +FL ++ Y H TCA DT+N++ VF+ DII +
Sbjct: 299 -----------AGNYIKSQFLDLNMRKDVKE--IYSHMTCATDTQNVKFVFDAVTDIIIK 345
Query: 1382 MHLR 1393
+L+
Sbjct: 346 ENLK 349
>ref|NP_032164.2| guanine nucleotide-binding protein G(i) subunit alpha-2 [Mus
musculus].
Length = 355
Score = 265 bits (676), Expect = 1e-70
Identities = 150/362 (41%), Positives = 219/362 (60%), Gaps = 2/362 (0%)
Frame = +2
Query: 314 EEKAQREANKKIEKQLQKDKQVYRATHRLLLLGAGESGKSTIVKQMRILHVNGFNGDEKA 493
E+KA E +K I+K L++D + +LLLLGAGESGKSTIVKQM+I+H +G++ +E
Sbjct: 8 EDKAAAERSKMIDKNLREDGEKAAREVKLLLLGAGESGKSTIVKQMKIIHEDGYSEEECR 67
Query: 494 TKVQDIKNNLKEAIETIVAAMSNLVPPVELANPE--NQFRVDYILSVMNVPDFDFPPEFY 667
+ +N ++I IV AM NL ++ A+P+ + R + LS P +
Sbjct: 68 QYRAVVYSNTIQSIMAIVKAMGNL--QIDFADPQRADDARQLFALSCAAEEQGMLPEDLS 125
Query: 668 EHAKALWEDEGVRACYERSNEYQLIDCAQYFLDKIDVIKQADYVPSDQDLLRCRVLTSGI 847
+ LW D GV+AC+ RS EYQL D A Y+L+ ++ I Q+DY+P+ QD+LR RV T+GI
Sbjct: 126 GVIRRLWADHGVQACFGRSREYQLNDSAAYYLNDLERIAQSDYIPTQQDVLRTRVKTTGI 185
Query: 848 FETKFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIFVVASSSYNMVIREDNQTNRLQ 1027
ET F ++F MFDVGGQR ER+KWI CF VTAIIF VA S+Y++V+ ED + NR+
Sbjct: 186 VETHFTFKDLHFKMFDVGGQRSERKKWIHCFEGVTAIIFCVALSAYDLVLAEDEEMNRMH 245
Query: 1028 EALNLFKSIWNNRWLRTISVILFLNKQDLLAEKVLAGKSKIEDYFPEFARYTTPEDATPE 1207
E++ LF SI NN+W S+ILFLNK+DL EK+ +S + FPE+ ++A
Sbjct: 246 ESMKLFDSICNNKWFTDTSIILFLNKKDLFEEKIT--QSSLTICFPEYTGANKYDEAAS- 302
Query: 1208 PGEDPRVTRAKYFIRDEFLRISTASGDGRHYCYPHFTCAVDTENIRRVFNDCRDIIQRMH 1387
+I+ +F ++ Y HFTCA DT+N++ VF+ D+I + +
Sbjct: 303 ------------YIQSKFEDLNKRKDTKE--IYTHFTCATDTKNVQFVFDAVTDVIIKNN 348
Query: 1388 LR 1393
L+
Sbjct: 349 LK 350
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 42,443,170
Number of extensions: 968315
Number of successful extensions: 3712
Number of sequences better than 1.0e-05: 21
Number of HSP's gapped: 3663
Number of HSP's successfully gapped: 21
Length of query: 586
Length of database: 15,617,559
Length adjustment: 107
Effective length of query: 479
Effective length of database: 12,403,707
Effective search space: 5941375653
Effective search space used: 5941375653
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002046
(1760 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001165456.1| guanine nucleotide-binding protein G(s) subu... 771 0.0
Alignment gi|NP_001165454.1| guanine nucleotide-binding protein G(s) subu... 767 0.0
Alignment gi|NP_999477.2| guanine nucleotide-binding protein G(s) subunit... 760 0.0
Alignment gi|NP_001165455.1| guanine nucleotide-binding protein G(s) subu... 759 0.0
Alignment gi|NP_001033712.1| guanine nucleotide-binding protein G(q) subu... 269 3e-72
Alignment gi|NP_001116587.1| GBI1 protein [Sus scrofa]. 267 1e-71
Alignment gi|NP_001038003.1| guanine nucleotide-binding protein subunit a... 264 1e-70
Alignment gi|NP_001116588.1| guanine nucleotide-binding protein G(i) subu... 263 3e-70
Alignment gi|XP_001928011.1| PREDICTED: guanine nucleotide-binding protei... 262 5e-70
Alignment gi|NP_001090987.1| guanine nucleotide-binding protein subunit a... 260 2e-69
>ref|NP_001165456.1| guanine nucleotide-binding protein G(s) subunit alpha isoform g [Sus
scrofa].
Length = 379
Score = 771 bits (1992), Expect = 0.0
Identities = 379/379 (100%), Positives = 379/379 (100%)
Frame = +2
Query: 272 MGCLGNSKTEDQRNEEKAQREANKKIEKQLQKDKQVYRATHRLLLLGAGESGKSTIVKQM 451
MGCLGNSKTEDQRNEEKAQREANKKIEKQLQKDKQVYRATHRLLLLGAGESGKSTIVKQM
Sbjct: 1 MGCLGNSKTEDQRNEEKAQREANKKIEKQLQKDKQVYRATHRLLLLGAGESGKSTIVKQM 60
Query: 452 RILHVNGFNGDEKATKVQDIKNNLKEAIETIVAAMSNLVPPVELANPENQFRVDYILSVM 631
RILHVNGFNGDEKATKVQDIKNNLKEAIETIVAAMSNLVPPVELANPENQFRVDYILSVM
Sbjct: 61 RILHVNGFNGDEKATKVQDIKNNLKEAIETIVAAMSNLVPPVELANPENQFRVDYILSVM 120
Query: 632 NVPDFDFPPEFYEHAKALWEDEGVRACYERSNEYQLIDCAQYFLDKIDVIKQADYVPSDQ 811
NVPDFDFPPEFYEHAKALWEDEGVRACYERSNEYQLIDCAQYFLDKIDVIKQADYVPSDQ
Sbjct: 121 NVPDFDFPPEFYEHAKALWEDEGVRACYERSNEYQLIDCAQYFLDKIDVIKQADYVPSDQ 180
Query: 812 DLLRCRVLTSGIFETKFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIFVVASSSYNM 991
DLLRCRVLTSGIFETKFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIFVVASSSYNM
Sbjct: 181 DLLRCRVLTSGIFETKFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIFVVASSSYNM 240
Query: 992 VIREDNQTNRLQEALNLFKSIWNNRWLRTISVILFLNKQDLLAEKVLAGKSKIEDYFPEF 1171
VIREDNQTNRLQEALNLFKSIWNNRWLRTISVILFLNKQDLLAEKVLAGKSKIEDYFPEF
Sbjct: 241 VIREDNQTNRLQEALNLFKSIWNNRWLRTISVILFLNKQDLLAEKVLAGKSKIEDYFPEF 300
Query: 1172 ARYTTPEDATPEPGEDPRVTRAKYFIRDEFLRISTASGDGRHYCYPHFTCAVDTENIRRV 1351
ARYTTPEDATPEPGEDPRVTRAKYFIRDEFLRISTASGDGRHYCYPHFTCAVDTENIRRV
Sbjct: 301 ARYTTPEDATPEPGEDPRVTRAKYFIRDEFLRISTASGDGRHYCYPHFTCAVDTENIRRV 360
Query: 1352 FNDCRDIIQRMHLRQYELL 1408
FNDCRDIIQRMHLRQYELL
Sbjct: 361 FNDCRDIIQRMHLRQYELL 379
>ref|NP_001165454.1| guanine nucleotide-binding protein G(s) subunit alpha GNASS [Sus
scrofa].
Length = 380
Score = 767 bits (1980), Expect = 0.0
Identities = 379/380 (99%), Positives = 379/380 (99%), Gaps = 1/380 (0%)
Frame = +2
Query: 272 MGCLGNSKTEDQRNEEKAQREANKKIEKQLQKDKQVYRATHRLLLLGAGESGKSTIVKQM 451
MGCLGNSKTEDQRNEEKAQREANKKIEKQLQKDKQVYRATHRLLLLGAGESGKSTIVKQM
Sbjct: 1 MGCLGNSKTEDQRNEEKAQREANKKIEKQLQKDKQVYRATHRLLLLGAGESGKSTIVKQM 60
Query: 452 RILHVNGFNGD-EKATKVQDIKNNLKEAIETIVAAMSNLVPPVELANPENQFRVDYILSV 628
RILHVNGFNGD EKATKVQDIKNNLKEAIETIVAAMSNLVPPVELANPENQFRVDYILSV
Sbjct: 61 RILHVNGFNGDSEKATKVQDIKNNLKEAIETIVAAMSNLVPPVELANPENQFRVDYILSV 120
Query: 629 MNVPDFDFPPEFYEHAKALWEDEGVRACYERSNEYQLIDCAQYFLDKIDVIKQADYVPSD 808
MNVPDFDFPPEFYEHAKALWEDEGVRACYERSNEYQLIDCAQYFLDKIDVIKQADYVPSD
Sbjct: 121 MNVPDFDFPPEFYEHAKALWEDEGVRACYERSNEYQLIDCAQYFLDKIDVIKQADYVPSD 180
Query: 809 QDLLRCRVLTSGIFETKFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIFVVASSSYN 988
QDLLRCRVLTSGIFETKFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIFVVASSSYN
Sbjct: 181 QDLLRCRVLTSGIFETKFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIFVVASSSYN 240
Query: 989 MVIREDNQTNRLQEALNLFKSIWNNRWLRTISVILFLNKQDLLAEKVLAGKSKIEDYFPE 1168
MVIREDNQTNRLQEALNLFKSIWNNRWLRTISVILFLNKQDLLAEKVLAGKSKIEDYFPE
Sbjct: 241 MVIREDNQTNRLQEALNLFKSIWNNRWLRTISVILFLNKQDLLAEKVLAGKSKIEDYFPE 300
Query: 1169 FARYTTPEDATPEPGEDPRVTRAKYFIRDEFLRISTASGDGRHYCYPHFTCAVDTENIRR 1348
FARYTTPEDATPEPGEDPRVTRAKYFIRDEFLRISTASGDGRHYCYPHFTCAVDTENIRR
Sbjct: 301 FARYTTPEDATPEPGEDPRVTRAKYFIRDEFLRISTASGDGRHYCYPHFTCAVDTENIRR 360
Query: 1349 VFNDCRDIIQRMHLRQYELL 1408
VFNDCRDIIQRMHLRQYELL
Sbjct: 361 VFNDCRDIIQRMHLRQYELL 380
>ref|NP_999477.2| guanine nucleotide-binding protein G(s) subunit alpha GNASL [Sus
scrofa].
Length = 394
Score = 760 bits (1962), Expect = 0.0
Identities = 378/394 (95%), Positives = 379/394 (96%), Gaps = 15/394 (3%)
Frame = +2
Query: 272 MGCLGNSKTEDQRNEEKAQREANKKIEKQLQKDKQVYRATHRLLLLGAGESGKSTIVKQM 451
MGCLGNSKTEDQRNEEKAQREANKKIEKQLQKDKQVYRATHRLLLLGAGESGKSTIVKQM
Sbjct: 1 MGCLGNSKTEDQRNEEKAQREANKKIEKQLQKDKQVYRATHRLLLLGAGESGKSTIVKQM 60
Query: 452 RILHVNGFNGD---------------EKATKVQDIKNNLKEAIETIVAAMSNLVPPVELA 586
RILHVNGFNG+ EKATKVQDIKNNLKEAIETIVAAMSNLVPPVELA
Sbjct: 61 RILHVNGFNGEGGEEDPQAARSNSDGEKATKVQDIKNNLKEAIETIVAAMSNLVPPVELA 120
Query: 587 NPENQFRVDYILSVMNVPDFDFPPEFYEHAKALWEDEGVRACYERSNEYQLIDCAQYFLD 766
NPENQFRVDYILSVMNVPDFDFPPEFYEHAKALWEDEGVRACYERSNEYQLIDCAQYFLD
Sbjct: 121 NPENQFRVDYILSVMNVPDFDFPPEFYEHAKALWEDEGVRACYERSNEYQLIDCAQYFLD 180
Query: 767 KIDVIKQADYVPSDQDLLRCRVLTSGIFETKFQVDKVNFHMFDVGGQRDERRKWIQCFND 946
KIDVIKQADYVPSDQDLLRCRVLTSGIFETKFQVDKVNFHMFDVGGQRDERRKWIQCFND
Sbjct: 181 KIDVIKQADYVPSDQDLLRCRVLTSGIFETKFQVDKVNFHMFDVGGQRDERRKWIQCFND 240
Query: 947 VTAIIFVVASSSYNMVIREDNQTNRLQEALNLFKSIWNNRWLRTISVILFLNKQDLLAEK 1126
VTAIIFVVASSSYNMVIREDNQTNRLQEALNLFKSIWNNRWLRTISVILFLNKQDLLAEK
Sbjct: 241 VTAIIFVVASSSYNMVIREDNQTNRLQEALNLFKSIWNNRWLRTISVILFLNKQDLLAEK 300
Query: 1127 VLAGKSKIEDYFPEFARYTTPEDATPEPGEDPRVTRAKYFIRDEFLRISTASGDGRHYCY 1306
VLAGKSKIEDYFPEFARYTTPEDATPEPGEDPRVTRAKYFIRDEFLRISTASGDGRHYCY
Sbjct: 301 VLAGKSKIEDYFPEFARYTTPEDATPEPGEDPRVTRAKYFIRDEFLRISTASGDGRHYCY 360
Query: 1307 PHFTCAVDTENIRRVFNDCRDIIQRMHLRQYELL 1408
PHFTCAVDTENIRRVFNDCRDIIQRMHLRQYELL
Sbjct: 361 PHFTCAVDTENIRRVFNDCRDIIQRMHLRQYELL 394
>ref|NP_001165455.1| guanine nucleotide-binding protein G(s) subunit alpha isoform f [Sus
scrofa].
Length = 395
Score = 759 bits (1961), Expect = 0.0
Identities = 378/395 (95%), Positives = 379/395 (95%), Gaps = 16/395 (4%)
Frame = +2
Query: 272 MGCLGNSKTEDQRNEEKAQREANKKIEKQLQKDKQVYRATHRLLLLGAGESGKSTIVKQM 451
MGCLGNSKTEDQRNEEKAQREANKKIEKQLQKDKQVYRATHRLLLLGAGESGKSTIVKQM
Sbjct: 1 MGCLGNSKTEDQRNEEKAQREANKKIEKQLQKDKQVYRATHRLLLLGAGESGKSTIVKQM 60
Query: 452 RILHVNGFNGD----------------EKATKVQDIKNNLKEAIETIVAAMSNLVPPVEL 583
RILHVNGFNG+ EKATKVQDIKNNLKEAIETIVAAMSNLVPPVEL
Sbjct: 61 RILHVNGFNGEGGEEDPQAARSNSDGSEKATKVQDIKNNLKEAIETIVAAMSNLVPPVEL 120
Query: 584 ANPENQFRVDYILSVMNVPDFDFPPEFYEHAKALWEDEGVRACYERSNEYQLIDCAQYFL 763
ANPENQFRVDYILSVMNVPDFDFPPEFYEHAKALWEDEGVRACYERSNEYQLIDCAQYFL
Sbjct: 121 ANPENQFRVDYILSVMNVPDFDFPPEFYEHAKALWEDEGVRACYERSNEYQLIDCAQYFL 180
Query: 764 DKIDVIKQADYVPSDQDLLRCRVLTSGIFETKFQVDKVNFHMFDVGGQRDERRKWIQCFN 943
DKIDVIKQADYVPSDQDLLRCRVLTSGIFETKFQVDKVNFHMFDVGGQRDERRKWIQCFN
Sbjct: 181 DKIDVIKQADYVPSDQDLLRCRVLTSGIFETKFQVDKVNFHMFDVGGQRDERRKWIQCFN 240
Query: 944 DVTAIIFVVASSSYNMVIREDNQTNRLQEALNLFKSIWNNRWLRTISVILFLNKQDLLAE 1123
DVTAIIFVVASSSYNMVIREDNQTNRLQEALNLFKSIWNNRWLRTISVILFLNKQDLLAE
Sbjct: 241 DVTAIIFVVASSSYNMVIREDNQTNRLQEALNLFKSIWNNRWLRTISVILFLNKQDLLAE 300
Query: 1124 KVLAGKSKIEDYFPEFARYTTPEDATPEPGEDPRVTRAKYFIRDEFLRISTASGDGRHYC 1303
KVLAGKSKIEDYFPEFARYTTPEDATPEPGEDPRVTRAKYFIRDEFLRISTASGDGRHYC
Sbjct: 301 KVLAGKSKIEDYFPEFARYTTPEDATPEPGEDPRVTRAKYFIRDEFLRISTASGDGRHYC 360
Query: 1304 YPHFTCAVDTENIRRVFNDCRDIIQRMHLRQYELL 1408
YPHFTCAVDTENIRRVFNDCRDIIQRMHLRQYELL
Sbjct: 361 YPHFTCAVDTENIRRVFNDCRDIIQRMHLRQYELL 395
>ref|NP_001033712.1| guanine nucleotide-binding protein G(q) subunit alpha [Sus scrofa].
Length = 359
Score = 269 bits (688), Expect = 3e-72
Identities = 148/365 (40%), Positives = 220/365 (60%)
Frame = +2
Query: 314 EEKAQREANKKIEKQLQKDKQVYRATHRLLLLGAGESGKSTIVKQMRILHVNGFNGDEKA 493
E K R N +IE+QL++DK+ R +LLLLG GESGKST +KQMRI+H +G++ ++K
Sbjct: 14 EAKEARRINDEIERQLRRDKRDARRELKLLLLGTGESGKSTFIKQMRIIHGSGYSDEDKR 73
Query: 494 TKVQDIKNNLKEAIETIVAAMSNLVPPVELANPENQFRVDYILSVMNVPDFDFPPEFYEH 673
+ + N+ A++ ++ AM L P + + + ++ + V V F+ P + +
Sbjct: 74 GFTKLVYQNIFTAMQAMIRAMDTLKIPYKYEHNKAHAQLVREVDVEKVSAFENP--YVDA 131
Query: 674 AKALWEDEGVRACYERSNEYQLIDCAQYFLDKIDVIKQADYVPSDQDLLRCRVLTSGIFE 853
K+LW D G++ CY+R EYQL D +Y+L+ +D + Y+P+ QD+LR RV T+GI E
Sbjct: 132 IKSLWNDPGIQECYDRRREYQLSDSTKYYLNDLDRVADPAYLPTQQDVLRVRVPTTGIIE 191
Query: 854 TKFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIFVVASSSYNMVIREDNQTNRLQEA 1033
F + V F M DVGGQR ERRKWI CF +VT+I+F+VA S Y+ V+ E + NR++E+
Sbjct: 192 YPFDLQSVIFRMVDVGGQRSERRKWIHCFENVTSIMFLVALSEYDQVLVESDNENRMEES 251
Query: 1034 LNLFKSIWNNRWLRTISVILFLNKQDLLAEKVLAGKSKIEDYFPEFARYTTPEDATPEPG 1213
LF++I W + SVILFLNK+DLL EK++ S + DYFPE+ G
Sbjct: 252 KALFRTIITYPWFQNSSVILFLNKKDLLEEKIM--YSHLVDYFPEY------------DG 297
Query: 1214 EDPRVTRAKYFIRDEFLRISTASGDGRHYCYPHFTCAVDTENIRRVFNDCRDIIQRMHLR 1393
A+ FI F+ ++ D Y HFTCA DTENIR VF +D I +++L+
Sbjct: 298 PQRDAQAAREFILKMFVDLNP---DSDKIIYSHFTCATDTENIRFVFAAVKDTILQLNLK 354
Query: 1394 QYELL 1408
+Y L+
Sbjct: 355 EYNLV 359
>ref|NP_001116587.1| GBI1 protein [Sus scrofa].
Length = 355
Score = 267 bits (683), Expect = 1e-71
Identities = 153/362 (42%), Positives = 219/362 (60%), Gaps = 2/362 (0%)
Frame = +2
Query: 314 EEKAQREANKKIEKQLQKDKQVYRATHRLLLLGAGESGKSTIVKQMRILHVNGFNGDEKA 493
E+KA E +K I+K L++D + +LLLLGAGESGKSTIVKQM+I+H +G++ +E
Sbjct: 8 EDKAAAERSKMIDKNLREDGEKAAREVKLLLLGAGESGKSTIVKQMKIIHEDGYSEEECR 67
Query: 494 TKVQDIKNNLKEAIETIVAAMSNLVPPVELANPE--NQFRVDYILSVMNVPDFDFPPEFY 667
+ +N ++I IV AM NL ++ A+P + R + LS P +
Sbjct: 68 QYRAVVYSNTIQSIMAIVKAMGNL--QIDFADPSRADDARQLFALSCTAEEQGVLPEDLS 125
Query: 668 EHAKALWEDEGVRACYERSNEYQLIDCAQYFLDKIDVIKQADYVPSDQDLLRCRVLTSGI 847
+ LW D GV+AC+ RS EYQL D A Y+L+ ++ I Q+DY+P+ QD+LR RV T+GI
Sbjct: 126 GVIRRLWADHGVQACFGRSREYQLNDSAAYYLNDLERIAQSDYIPTQQDVLRTRVKTTGI 185
Query: 848 FETKFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIFVVASSSYNMVIREDNQTNRLQ 1027
ET F ++F MFDVGGQR ER+KWI CF VTAIIF VA S Y++V+ ED + NR+
Sbjct: 186 VETHFTFKDLHFKMFDVGGQRSERKKWIHCFEGVTAIIFCVALSDYDLVLAEDEEMNRMH 245
Query: 1028 EALNLFKSIWNNRWLRTISVILFLNKQDLLAEKVLAGKSKIEDYFPEFARYTTPEDATPE 1207
E++ LF SI NN+W S+ILFLNK+DL EK+ KS + +PE+A T E+A
Sbjct: 246 ESMKLFDSICNNKWFTDTSIILFLNKKDLFEEKI--KKSPLTICYPEYAGSNTYEEAAA- 302
Query: 1208 PGEDPRVTRAKYFIRDEFLRISTASGDGRHYCYPHFTCAVDTENIRRVFNDCRDIIQRMH 1387
+I+ +F ++ Y HFTCA DT+N++ VF+ D+I + +
Sbjct: 303 ------------YIQCQFEDLNKRKDTKE--IYTHFTCATDTKNVQFVFDAVTDVIIKNN 348
Query: 1388 LR 1393
L+
Sbjct: 349 LK 350
>ref|NP_001038003.1| guanine nucleotide-binding protein subunit alpha-11 [Sus scrofa].
Length = 359
Score = 264 bits (674), Expect = 1e-70
Identities = 149/366 (40%), Positives = 215/366 (58%)
Frame = +2
Query: 311 NEEKAQREANKKIEKQLQKDKQVYRATHRLLLLGAGESGKSTIVKQMRILHVNGFNGDEK 490
+E K + N +IEKQL++DK+ R +LLLLG GESGKST +KQMRI+H G++ ++K
Sbjct: 13 DEVKESKRINAEIEKQLRRDKRDARRELKLLLLGTGESGKSTFIKQMRIIHGAGYSEEDK 72
Query: 491 ATKVQDIKNNLKEAIETIVAAMSNLVPPVELANPENQFRVDYILSVMNVPDFDFPPEFYE 670
+ + N+ A++ ++ AM L + +N+ I V F +
Sbjct: 73 RGFTKLVYQNIFTAMQAMIRAMETL--KILYKYEQNKANALLIREVDVEKVTTFEHRYVS 130
Query: 671 HAKALWEDEGVRACYERSNEYQLIDCAQYFLDKIDVIKQADYVPSDQDLLRCRVLTSGIF 850
K LW D G++ CY+R EYQL D A+Y+L +D I + Y+P+ QD+LR RV T+GI
Sbjct: 131 AIKTLWNDPGIQECYDRRREYQLSDSAKYYLTDVDRIATSGYLPTQQDVLRVRVPTTGII 190
Query: 851 ETKFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIFVVASSSYNMVIREDNQTNRLQE 1030
E F ++ + F M DVGGQR ERRKWI CF +VT+I+F+VA S Y+ V+ E + NR++E
Sbjct: 191 EYPFDLENIIFRMVDVGGQRSERRKWIHCFENVTSIMFLVALSEYDQVLVESDNENRMEE 250
Query: 1031 ALNLFKSIWNNRWLRTISVILFLNKQDLLAEKVLAGKSKIEDYFPEFARYTTPEDATPEP 1210
+ LF++I W + SVILFLNK+DLL +K+L S + DYFPEF
Sbjct: 251 SKALFRTIVTYPWFQNSSVILFLNKKDLLEDKILF--SHLVDYFPEF------------D 296
Query: 1211 GEDPRVTRAKYFIRDEFLRISTASGDGRHYCYPHFTCAVDTENIRRVFNDCRDIIQRMHL 1390
G A+ FI F+ ++ D Y HFTCA DTENIR VF +D I +++L
Sbjct: 297 GPQRVAQAAREFILKMFVDLNP---DSDKIIYSHFTCATDTENIRFVFAAVKDTILQLNL 353
Query: 1391 RQYELL 1408
++Y L+
Sbjct: 354 KEYNLV 359
>ref|NP_001116588.1| guanine nucleotide-binding protein G(i) subunit alpha-2 [Sus scrofa].
Length = 355
Score = 263 bits (671), Expect = 3e-70
Identities = 150/362 (41%), Positives = 217/362 (59%), Gaps = 2/362 (0%)
Frame = +2
Query: 314 EEKAQREANKKIEKQLQKDKQVYRATHRLLLLGAGESGKSTIVKQMRILHVNGFNGDEKA 493
E+KA E +K I+K L++D + +LLLLGAGESGKSTIVKQM+I+H +G++ +E
Sbjct: 8 EDKAAAERSKMIDKNLREDGEKAAREVKLLLLGAGESGKSTIVKQMKIIHEDGYSEEECR 67
Query: 494 TKVQDIKNNLKEAIETIVAAMSNLVPPVELANPE--NQFRVDYILSVMNVPDFDFPPEFY 667
+ +N ++I IV AM NL ++ A+P + R + LS P +
Sbjct: 68 QYRAVVYSNTIQSIMAIVKAMGNL--QIDFADPSRADDARQLFALSCTAEEQGVLPEDLS 125
Query: 668 EHAKALWEDEGVRACYERSNEYQLIDCAQYFLDKIDVIKQADYVPSDQDLLRCRVLTSGI 847
+ LW D GV+AC+ RS EYQL D A Y+L+ ++ I Q+DY+P+ QD+LR RV T+GI
Sbjct: 126 GVIRRLWADHGVQACFGRSREYQLNDSAAYYLNDLERIAQSDYIPTQQDVLRTRVKTTGI 185
Query: 848 FETKFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIFVVASSSYNMVIREDNQTNRLQ 1027
ET F ++F MFDVGGQR ER+KWI CF VTAIIF VA S+Y++V+ ED + NR+
Sbjct: 186 VETHFTFKDLHFKMFDVGGQRSERKKWIHCFEGVTAIIFCVALSAYDLVLAEDEEMNRMH 245
Query: 1028 EALNLFKSIWNNRWLRTISVILFLNKQDLLAEKVLAGKSKIEDYFPEFARYTTPEDATPE 1207
E++ LF SI NN+W S+ILFLNK+DL EK+ S + FPE+ ++A
Sbjct: 246 ESMKLFDSICNNKWFTDTSIILFLNKKDLFEEKIT--HSPLTICFPEYTGANKYDEAAS- 302
Query: 1208 PGEDPRVTRAKYFIRDEFLRISTASGDGRHYCYPHFTCAVDTENIRRVFNDCRDIIQRMH 1387
+I+ +F ++ Y HFTCA DT+N++ VF+ D+I + +
Sbjct: 303 ------------YIQSKFEDLNKRKDTKE--IYTHFTCATDTKNVQFVFDAVTDVIIKNN 348
Query: 1388 LR 1393
L+
Sbjct: 349 LK 350
>ref|XP_001928011.1| PREDICTED: guanine nucleotide-binding protein G(t) subunit
alpha-1-like [Sus scrofa].
Length = 350
Score = 262 bits (669), Expect = 5e-70
Identities = 147/361 (40%), Positives = 224/361 (62%), Gaps = 1/361 (0%)
Frame = +2
Query: 314 EEKAQREANKKIEKQLQKDKQVYRATHRLLLLGAGESGKSTIVKQMRILHVNGFNGDEKA 493
EEK RE KK+++ +KD + T +LLLLGAGESGKSTIVKQM+I+H +G++ +E
Sbjct: 8 EEKHSRELEKKLKEDAEKDAR----TVKLLLLGAGESGKSTIVKQMKIIHQDGYSLEECL 63
Query: 494 TKVQDIKNNLKEAIETIVAAMSNLVPPVELANPENQFRVDYILSVMN-VPDFDFPPEFYE 670
+ I N ++I IV AM+ L ++ + Q ++ + + + + P E +
Sbjct: 64 EFIAIIYGNTLQSILAIVRAMTTL--NIQYGDSARQDDARKLMHMADTIEEGTMPKEMSD 121
Query: 671 HAKALWEDEGVRACYERSNEYQLIDCAQYFLDKIDVIKQADYVPSDQDLLRCRVLTSGIF 850
+ LW+D G++AC+ER++EYQL D A Y+L ++ + YVP++QD+LR RV T+GI
Sbjct: 122 IIQRLWKDSGIQACFERASEYQLNDSAGYYLSDLERLVTPGYVPTEQDVLRSRVKTTGII 181
Query: 851 ETKFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIFVVASSSYNMVIREDNQTNRLQE 1030
ET+F +NF MFDVGGQR ER+KWI CF VT IIF+ A S+Y+MV+ ED++ NR+ E
Sbjct: 182 ETQFSFKDLNFRMFDVGGQRSERKKWIHCFEGVTCIIFIAALSAYDMVLVEDDEVNRMHE 241
Query: 1031 ALNLFKSIWNNRWLRTISVILFLNKQDLLAEKVLAGKSKIEDYFPEFARYTTPEDATPEP 1210
+L+LF SI N+R+ T S++LFLNK+D+ +EK+ K+ + FP++ T ED
Sbjct: 242 SLHLFNSICNHRYFATTSIVLFLNKKDVFSEKI--KKAHLSICFPDYNGPNTYED----- 294
Query: 1211 GEDPRVTRAKYFIRDEFLRISTASGDGRHYCYPHFTCAVDTENIRRVFNDCRDIIQRMHL 1390
A +I+ +FL ++ Y H TCA DT+N++ VF+ DII + +L
Sbjct: 295 --------AGNYIKVQFLELNMRRDVKE--IYSHMTCATDTQNVKFVFDAVTDIIIKENL 344
Query: 1391 R 1393
+
Sbjct: 345 K 345
>ref|NP_001090987.1| guanine nucleotide-binding protein subunit alpha-14 [Sus scrofa].
Length = 355
Score = 260 bits (664), Expect = 2e-69
Identities = 150/366 (40%), Positives = 217/366 (59%), Gaps = 1/366 (0%)
Frame = +2
Query: 314 EEKAQREANKKIEKQLQKDKQVYRATHRLLLLGAGESGKSTIVKQMRILHVNGFNGDEKA 493
EEK + + +IE+QL++DK+ R +LLLLG GESGKST +KQMRI+H +G++ +++
Sbjct: 10 EEKESQRISAEIERQLRRDKKDARRELKLLLLGTGESGKSTFIKQMRIIHGSGYSDEDRK 69
Query: 494 TKVQDIKNNLKEAIETIVAAMSNLVPPVELANPENQFRVDYILSVMNVPDFDFPPEFYEH 673
+ + N+ A++ ++ AM L ++ +N+ I V + E
Sbjct: 70 GFTKLVYQNIFTAMQAMIRAMDTL--RIQYVCEQNKENAQLIREVEVDKVSALSRDQVEA 127
Query: 674 AKALWEDEGVRACYERSNEYQLIDCAQYFLDKIDVIKQADYVPSDQDLLRCRVLTSGIFE 853
K LW+D G++ CY+R EYQL D A+Y+L ID I +VP+ QD+LR RV T+GI E
Sbjct: 128 IKELWQDPGIQECYDRRREYQLSDSAKYYLTDIDRIAMPSFVPTQQDVLRVRVPTTGIIE 187
Query: 854 TKFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIFVVASSSYNMVIREDNQTNRLQEA 1033
F ++ + F M DVGGQR ERRKWI CF VT+IIF+VA S Y+ V+ E + NR++E+
Sbjct: 188 YPFDLENIIFRMVDVGGQRSERRKWIHCFESVTSIIFLVALSEYDQVLAECDNENRMEES 247
Query: 1034 LNLFKSIWNNRWLRTISVILFLNKQDLLAEKVLAGKSKIEDYFPEFARYTTPEDATPEPG 1213
LFK+I W SVILFLNK+DLL EK++ S + YFPE YT P+
Sbjct: 248 KALFKTIITYPWFLNSSVILFLNKKDLLEEKIM--YSHLISYFPE---YTGPK------- 295
Query: 1214 EDPRVTRAKYFIRDEFLRI-STASGDGRHYCYPHFTCAVDTENIRRVFNDCRDIIQRMHL 1390
+D + RD L++ + D Y HFTCA DTENIR VF +D I +++L
Sbjct: 296 QDVKAA------RDFILKLYQDQNPDKEKVIYSHFTCATDTENIRFVFAAVKDTILQLNL 349
Query: 1391 RQYELL 1408
R++ L+
Sbjct: 350 REFNLV 355
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 33,779,070
Number of extensions: 1107761
Number of successful extensions: 3069
Number of sequences better than 1.0e-05: 23
Number of HSP's gapped: 3024
Number of HSP's successfully gapped: 23
Length of query: 586
Length of database: 11,343,932
Length adjustment: 104
Effective length of query: 482
Effective length of database: 8,754,644
Effective search space: 4219738408
Effective search space used: 4219738408
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002046
(1760 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr17 789 0.0
Sscrofa_Chr06 139 6e-30
Sscrofa_Chr04 70 5e-09
>Sscrofa_Chr17
|| Length = 69701581
Score = 789 bits (398), Expect = 0.0
Identities = 412/419 (98%)
Strand = Plus / Plus
Query: 1264 gagaatcagcactgctagtggagacgggcgccactactgctaccctcacttcacctgcgc 1323
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66422891 gagaatcagcactgctagtggagacgggcgccactactgctaccctcacttcacctgcgc 66422950
Query: 1324 tgtggacactgagaacatccgccgtgtgttcaacgactgccgagacatcatccagcgcat 1383
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66422951 tgtggacactgagaacatccgccgtgtgttcaacgactgccgagacatcatccagcgcat 66423010
Query: 1384 gcacctccgtcagtacgagctgctctaagaagggaacctctaaatttaattaaggcctta 1443
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66423011 gcacctccgtcagtacgagctgctctaagaagggaacctctaaatttaattaaggcctta 66423070
Query: 1444 agcacaattaattaaacgtgaaatgtaattgtacacgcggttgatcacccaccatagggc 1503
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66423071 agcacaattaattaaacgtgaaatgtaattgtacacgcggttgatcacccaccatagggc 66423130
Query: 1504 ctgattaacaaagcaacctttcctgtccctcaagtgattttgcgaaaccccctttaccct 1563
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66423131 ctgattaacaaagcaacctttcctgtccctcaagtgattttgcgaaaccccctttaccct 66423190
Query: 1564 tccgcttgcttaaatattccaaatttagaaagcttaaggcggcctacagaaaaagaattt 1623
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66423191 tccgcttgcttaaatattccaaatttagaaagcttaaggcggcctacagaaaaagaattt 66423250
Query: 1624 nnnnnnnggccacaaacgttccctctctctttaagtaactaaaataatagcagcaaaca 1682
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66423251 aaaaaaaggccacaaacgttccctctctctttaagtaactaaaataatagcagcaaaca 66423309
Score = 283 bits (143), Expect = 2e-73
Identities = 146/147 (99%)
Strand = Plus / Plus
Query: 2 agcagctccctcagctcctgctctggtccgcctcgccccgcggcggccatcagacccctc 61
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66352570 agcagctcccgcagctcctgctctggtccgcctcgccccgcggcggccatcagacccctc 66352629
Query: 62 ggcttcggcgcgaggggccgggagccgcgcgctcccctcggtcagaccgacaccaccctc 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66352630 ggcttcggcgcgaggggccgggagccgcgcgctcccctcggtcagaccgacaccaccctc 66352689
Query: 122 cccgcgcgctcctccccgaggagccga 148
|||||||||||||||||||||||||||
Sbjct: 66352690 cccgcgcgctcctccccgaggagccga 66352716
Score = 280 bits (141), Expect = 3e-72
Identities = 141/141 (100%)
Strand = Plus / Plus
Query: 272 atgggctgtctcggaaacagtaagaccgaggaccagcgcaacgaggagaaggcgcagcgc 331
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66352840 atgggctgtctcggaaacagtaagaccgaggaccagcgcaacgaggagaaggcgcagcgc 66352899
Query: 332 gaggccaacaaaaagatcgagaagcagctgcagaaggacaagcaggtctaccgggccacg 391
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66352900 gaggccaacaaaaagatcgagaagcagctgcagaaggacaagcaggtctaccgggccacg 66352959
Query: 392 caccgcctgctgctgctgggt 412
|||||||||||||||||||||
Sbjct: 66352960 caccgcctgctgctgctgggt 66352980
Score = 264 bits (133), Expect = 1e-67
Identities = 133/133 (100%)
Strand = Plus / Plus
Query: 1064 agatggctgcgcaccatctctgtgattctgttcctcaacaagcaagatctgctggctgag 1123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66422173 agatggctgcgcaccatctctgtgattctgttcctcaacaagcaagatctgctggctgag 66422232
Query: 1124 aaagtcctcgctggaaaatcgaagattgaggactactttccagaatttgctcgctacact 1183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66422233 aaagtcctcgctggaaaatcgaagattgaggactactttccagaatttgctcgctacact 66422292
Query: 1184 actcctgaggatg 1196
|||||||||||||
Sbjct: 66422293 actcctgaggatg 66422305
Score = 242 bits (122), Expect = 5e-61
Identities = 122/122 (100%)
Strand = Plus / Plus
Query: 944 gatgtgaccgccatcattttcgtggtcgccagcagcagctacaacatggtcattcgggag 1003
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66421901 gatgtgaccgccatcattttcgtggtcgccagcagcagctacaacatggtcattcgggag 66421960
Query: 1004 gacaaccagaccaaccgcctgcaggaggccctgaacctcttcaagagcatctggaacaac 1063
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66421961 gacaaccagaccaaccgcctgcaggaggccctgaacctcttcaagagcatctggaacaac 66422020
Query: 1064 ag 1065
||
Sbjct: 66422021 ag 66422022
Score = 240 bits (121), Expect = 2e-60
Identities = 121/121 (100%)
Strand = Plus / Plus
Query: 539 accatcgtggctgccatgagcaacctggtgcctccagtggagctggccaaccctgagaac 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66416200 accatcgtggctgccatgagcaacctggtgcctccagtggagctggccaaccctgagaac 66416259
Query: 599 cagttcagagtggactacatcctgagcgtgatgaacgtgcctgactttgacttccctccc 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66416260 cagttcagagtggactacatcctgagcgtgatgaacgtgcctgactttgacttccctccc 66416319
Query: 659 g 659
|
Sbjct: 66416320 g 66416320
Score = 194 bits (98), Expect = 1e-46
Identities = 98/98 (100%)
Strand = Plus / Plus
Query: 659 gagttctacgagcatgccaaggctctgtgggaggacgagggcgtgcgcgcctgctacgag 718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66418342 gagttctacgagcatgccaaggctctgtgggaggacgagggcgtgcgcgcctgctacgag 66418401
Query: 719 cgctccaacgagtaccagctcatcgactgcgcccagta 756
||||||||||||||||||||||||||||||||||||||
Sbjct: 66418402 cgctccaacgagtaccagctcatcgactgcgcccagta 66418439
Score = 151 bits (76), Expect = 2e-33
Identities = 76/76 (100%)
Strand = Plus / Plus
Query: 810 aggacctgctccgctgccgcgtcctgacttctggaatctttgagaccaagttccaggtgg 869
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66421538 aggacctgctccgctgccgcgtcctgacttctggaatctttgagaccaagttccaggtgg 66421597
Query: 870 acaaagtcaacttcca 885
||||||||||||||||
Sbjct: 66421598 acaaagtcaacttcca 66421613
Score = 147 bits (74), Expect = 2e-32
Identities = 74/74 (100%)
Strand = Plus / Plus
Query: 410 ggtgctggagaatctggtaaaagcaccattgtgaagcagatgaggatcctgcatgttaat 469
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66356663 ggtgctggagaatctggtaaaagcaccattgtgaagcagatgaggatcctgcatgttaat 66356722
Query: 470 gggtttaatggaga 483
||||||||||||||
Sbjct: 66356723 gggtttaatggaga 66356736
Score = 147 bits (74), Expect = 2e-32
Identities = 74/74 (100%)
Strand = Plus / Plus
Query: 410 ggtgctggagaatctggtaaaagcaccattgtgaagcagatgaggatcctgcatgttaat 469
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66408663 ggtgctggagaatctggtaaaagcaccattgtgaagcagatgaggatcctgcatgttaat 66408722
Query: 470 gggtttaatggaga 483
||||||||||||||
Sbjct: 66408723 gggtttaatggaga 66408736
Score = 137 bits (69), Expect = 2e-29
Identities = 69/69 (100%)
Strand = Plus / Plus
Query: 1196 gcaactcccgagcccggagaggacccacgcgtgacccgggccaagtacttcattcgagat 1255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66422543 gcaactcccgagcccggagaggacccacgcgtgacccgggccaagtacttcattcgagat 66422602
Query: 1256 gaatttctg 1264
|||||||||
Sbjct: 66422603 gaatttctg 66422611
Score = 117 bits (59), Expect = 2e-23
Identities = 59/59 (100%)
Strand = Plus / Plus
Query: 886 catgtttgacgtcggtggccagcgtgacgagcgccgcaaatggatccaatgcttcaatg 944
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66421732 catgtttgacgtcggtggccagcgtgacgagcgccgcaaatggatccaatgcttcaatg 66421790
Score = 111 bits (56), Expect = 1e-21
Identities = 56/56 (100%)
Strand = Plus / Plus
Query: 757 cttcctggacaagattgacgtcatcaagcaggctgactacgtgcccagcgaccagg 812
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66421350 cttcctggacaagattgacgtcatcaagcaggctgactacgtgcccagcgaccagg 66421405
Score = 109 bits (55), Expect = 5e-21
Identities = 55/55 (100%)
Strand = Plus / Plus
Query: 484 tgagaaggccaccaaagtgcaggacatcaagaacaacctgaaagaggccattgaa 538
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66416059 tgagaaggccaccaaagtgcaggacatcaagaacaacctgaaagaggccattgaa 66416113
>Sscrofa_Chr06
|| Length = 157765593
Score = 139 bits (70), Expect = 6e-30
Identities = 100/110 (90%)
Strand = Plus / Plus
Query: 1295 cactactgctaccctcacttcacctgcgctgtggacactgagaacatccgccgtgtgttc 1354
|||||||||||||| |||||||||||||| |||||||| |||||||||||||| || |||
Sbjct: 90702884 cactactgctacccgcacttcacctgcgcggtggacacggagaacatccgccgcgtcttc 90702943
Query: 1355 aacgactgccgagacatcatccagcgcatgcacctccgtcagtacgagct 1404
||||||||| | |||||||||||||||||||||||| |||||||||||
Sbjct: 90702944 aacgactgcagggacatcatccagcgcatgcacctcaagcagtacgagct 90702993
Score = 103 bits (52), Expect = 3e-19
Identities = 100/116 (86%)
Strand = Plus / Plus
Query: 950 accgccatcattttcgtggtcgccagcagcagctacaacatggtcattcgggaggacaac 1009
||||||||||| | ||||| ||| ||||||||||||||||||| || ||||||||||||
Sbjct: 90698734 accgccatcatctacgtggctgcctgcagcagctacaacatggtgatccgggaggacaac 90698793
Query: 1010 cagaccaaccgcctgcaggaggccctgaacctcttcaagagcatctggaacaacag 1065
| |||||| | |||| |||| ||||| |||||||| | |||||||||||||||||
Sbjct: 90698794 aacaccaacaggctgcgggagtccctggacctcttcgaaagcatctggaacaacag 90698849
Score = 101 bits (51), Expect = 1e-18
Identities = 104/124 (83%)
Strand = Plus / Plus
Query: 1559 acccttccgcttgcttaaatattccaaatttagaaagcttaaggcggcctacagaaaaag 1618
||||||| ||||| ||||||||||||||||||||||||||||||| |||| ||||||
Sbjct: 114284734 acccttcagcttgattaaatattccaaatttagaaagcttaaggcatcctatggaaaaat 114284793
Query: 1619 aatttnnnnnnnggccacaaacgttccctctctctttaagtaactaaaataatagcagca 1678
||||| |||||||||| ||||||||||||||| ||| ||||||||| |||||
Sbjct: 114284794 aattttaaaaaaggccacaaacattccctctctctttacataatgaaaataataacagca 114284853
Query: 1679 aaca 1682
||||
Sbjct: 114284854 aaca 114284857
Score = 75.8 bits (38), Expect = 7e-11
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 683 ctgtgggaggacgagggcgtgcgcgcctgctacgagcgctccaacgagtaccagctcatc 742
|||||||| |||||||| ||| ||||||| |||| | ||||||||||||||||||||
Sbjct: 90674149 ctgtgggacgacgagggggtgaaggcctgcttcgagaggtccaacgagtaccagctcatt 90674208
Query: 743 gactgcgcccagta 756
||||||||||||||
Sbjct: 90674209 gactgcgcccagta 90674222
Score = 65.9 bits (33), Expect = 7e-08
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 329 cgcgaggccaacaaaaagatcgagaagcagctgcagaagga 369
||||||||||| || ||||||||||||||||||||||||||
Sbjct: 90911582 cgcgaggccaataagaagatcgagaagcagctgcagaagga 90911542
Score = 63.9 bits (32), Expect = 3e-07
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 413 gctggagaatctggtaaaagcaccattgtgaagcagatga 452
||||||||||| || |||||||||||||||||||||||||
Sbjct: 26787196 gctggagaatcaggaaaaagcaccattgtgaagcagatga 26787157
>Sscrofa_Chr04
|| Length = 143465943
Score = 69.9 bits (35), Expect = 5e-09
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 410 ggtgctggagaatctggtaaaagcaccattgtgaagcagatga 452
||||||||||||||||||||||||||||| ||||| |||||||
Sbjct: 121009322 ggtgctggagaatctggtaaaagcaccatcgtgaaacagatga 121009280
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 38,438,799
Number of extensions: 213
Number of successful extensions: 213
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 211
Number of HSP's successfully gapped: 21
Length of query: 1760
Length of database: 2,808,509,378
Length adjustment: 22
Effective length of query: 1738
Effective length of database: 2,808,408,574
Effective search space: 4881014101612
Effective search space used: 4881014101612
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)