Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002051
(1045 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001193316.1| alcohol dehydrogenase 1C (class I), gamma po... 513 e-149
Alignment gi|NP_001029421.1| alcohol dehydrogenase class-3 [Bos taurus]. 375 e-105
Alignment gi|NP_001039522.1| alcohol dehydrogenase 6 [Bos taurus]. 369 e-102
Alignment gi|NP_001069311.1| class V alcohol dehydrogenase [Bos taurus]. 346 2e-95
Alignment gi|NP_001095529.1| alcohol dehydrogenase 4 [Bos taurus]. 339 3e-93
Alignment gi|NP_001032397.1| sorbitol dehydrogenase [Bos taurus]. 73 4e-13
Alignment gi|NP_858055.1| trans-2-enoyl-CoA reductase, mitochondrial prec... 54 3e-07
Alignment gi|XP_002694150.1| PREDICTED: crystallin, zeta-like [Bos taurus]. 50 3e-06
>ref|NP_001193316.1| alcohol dehydrogenase 1C (class I), gamma polypeptide [Bos taurus].
Length = 375
Score = 513 bits (1321), Expect(2) = e-149
Identities = 253/306 (82%), Positives = 275/306 (89%), Gaps = 1/306 (0%)
Frame = +3
Query: 87 MSTAGKVIKCKAAVLWELEKPFSIEEVEVAPPKAYEVRIKMVATGICRSDDHVVRGSLVT 266
MSTAGKVIKCKAAVLWEL KPFSIEEVEVAPPKA+EVRIKMVATGICRSDDHVV GSLVT
Sbjct: 1 MSTAGKVIKCKAAVLWELNKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVNGSLVT 60
Query: 267 PLPMILGHEAAGIVESIGEGVTTVKPGDKVIPLFVPQCGKCSVCKHPEANICCKNDLTNP 446
LP++LGHE AGIVESIGEGVTTV+PGDKVIPLF+PQCGKC+VCKHPEAN+C K L P
Sbjct: 61 RLPVVLGHEGAGIVESIGEGVTTVRPGDKVIPLFIPQCGKCNVCKHPEANLCLKFQLKEP 120
Query: 447 RGTLSDGTSRFTCKGKPILQFLGTSTFTQYTVVDEMSVAKIDAASPLEKVCLIGCGFSTG 626
RGTL+DGT RFTC+GKPI FLGTSTFTQYTVVDEMSVAKI A SPLEKVCLIGCGFSTG
Sbjct: 121 RGTLNDGTCRFTCRGKPIHHFLGTSTFTQYTVVDEMSVAKIHADSPLEKVCLIGCGFSTG 180
Query: 627 YGSAIKVAKVTQGSTCAXXXXXXXXXXXXXXCKAAGAARIIGVDINKDKFAKAKEVGATE 806
YGSA+K+AKVTQGSTCA CKAAGAARII VDINKDKFA+AK+VGATE
Sbjct: 181 YGSAVKIAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIAVDINKDKFARAKQVGATE 240
Query: 807 CINPQDYEKPIQEVLQEMSGGGVDFSFEVIGRIDTMISALLCCQKAYGVSVIVGVPPNSQ 986
CINPQDYEKPI+EVL+E+SGGGVDFSFEVIGR+DTM+SALLCCQ+AYGVSVIVGVPP++Q
Sbjct: 241 CINPQDYEKPIEEVLKEVSGGGVDFSFEVIGRLDTMMSALLCCQEAYGVSVIVGVPPHAQ 300
Query: 987 -ISL*P 1001
IS+ P
Sbjct: 301 NISMNP 306
Score = 36.2 bits (82), Expect(2) = e-149
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +1
Query: 997 NPMLLLNGRTWKGAIF 1044
NPMLLL GRTWKGAIF
Sbjct: 305 NPMLLLTGRTWKGAIF 320
>ref|NP_001029421.1| alcohol dehydrogenase class-3 [Bos taurus].
Length = 374
Score = 375 bits (963), Expect(2) = e-105
Identities = 182/298 (61%), Positives = 226/298 (75%), Gaps = 1/298 (0%)
Frame = +3
Query: 96 AGKVIKCKAAVLWELEKPFSIEEVEVAPPKAYEVRIKMVATGICRSDDHVVRGSLVTP-L 272
A +VIKCKAAV WE KP SIEEVEVAPPKA+EVRIK++AT +C +D + + G+
Sbjct: 2 ANQVIKCKAAVAWEAGKPLSIEEVEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGNY 61
Query: 273 PMILGHEAAGIVESIGEGVTTVKPGDKVIPLFVPQCGKCSVCKHPEANICCKNDLTNPRG 452
P+ILGHE AGIVES+GEGVT +K GD VIPL++PQCG+C C +P+ N+C K +T +G
Sbjct: 62 PVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKG 121
Query: 453 TLSDGTSRFTCKGKPILQFLGTSTFTQYTVVDEMSVAKIDAASPLEKVCLIGCGFSTGYG 632
+ DGTSRFTCKGK IL ++GTSTF++YTVV ++SVAKID +PL+KVCL+GCG STGYG
Sbjct: 122 LMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYG 181
Query: 633 SAIKVAKVTQGSTCAXXXXXXXXXXXXXXCKAAGAARIIGVDINKDKFAKAKEVGATECI 812
+A+ AKV GSTCA CK AGAARIIGVDINKDKFA+AKE GA+ECI
Sbjct: 182 AALNAAKVEPGSTCAVFGLGGVGLAVIMGCKMAGAARIIGVDINKDKFARAKEFGASECI 241
Query: 813 NPQDYEKPIQEVLQEMSGGGVDFSFEVIGRIDTMISALLCCQKAYGVSVIVGVPPNSQ 986
NPQD+ KPIQEVL EM+ GGVD+SFE IG + M +AL C K +G+SV+VGV + +
Sbjct: 242 NPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGISVVVGVAASGE 299
Score = 25.0 bits (53), Expect(2) = e-105
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +1
Query: 1000 PMLLLNGRTWKGAIF 1044
P L+ GRTWKG F
Sbjct: 305 PFQLVTGRTWKGTAF 319
>ref|NP_001039522.1| alcohol dehydrogenase 6 [Bos taurus].
Length = 375
Score = 369 bits (946), Expect = e-102
Identities = 190/321 (59%), Positives = 235/321 (73%), Gaps = 2/321 (0%)
Frame = +3
Query: 87 MSTAGKVIKCKAAVLWELEKPFSIEEVEVAPPKAYEVRIKMVATGICRSDDHVVRGSLVT 266
MST GKVI+CKAA++W+ FSIEEVEVAPPKA EVRIKMVAT +C ++ +++ +
Sbjct: 1 MSTTGKVIRCKAAIVWKPGGSFSIEEVEVAPPKAKEVRIKMVATALCGTEMKMLKDKNLQ 60
Query: 267 P--LPMILGHEAAGIVESIGEGVTTVKPGDKVIPLFVPQCGKCSVCKHPEANICCKNDLT 440
P+I+GHE AGIVES+GEGV+TVK GDKVI LF+PQCG+C+ C + N C K
Sbjct: 61 HQHYPIIMGHEGAGIVESVGEGVSTVKAGDKVIALFLPQCGECTSCLNSADNFCIKLKQA 120
Query: 441 NPRGTLSDGTSRFTCKGKPILQFLGTSTFTQYTVVDEMSVAKIDAASPLEKVCLIGCGFS 620
+SDGTSRFTCKGKP+ F TSTF++YTV+DE+SVAKIDAA+PLEKV L+ CGFS
Sbjct: 121 ETH-LMSDGTSRFTCKGKPVYHFGNTSTFSEYTVMDEISVAKIDAAAPLEKVFLVSCGFS 179
Query: 621 TGYGSAIKVAKVTQGSTCAXXXXXXXXXXXXXXCKAAGAARIIGVDINKDKFAKAKEVGA 800
TGYG AI AKVT GSTCA CKAAGA RII VDINKDKF KAKEVGA
Sbjct: 180 TGYGGAINTAKVTPGSTCAVFGLGGVGLSVIMGCKAAGATRIIAVDINKDKFEKAKEVGA 239
Query: 801 TECINPQDYEKPIQEVLQEMSGGGVDFSFEVIGRIDTMISALLCCQKAYGVSVIVGVPPN 980
TECINPQDYEKPIQEVL +++G GVDFSFEVIG +T+ +AL C++++GV VI+G+
Sbjct: 240 TECINPQDYEKPIQEVLFDLTGDGVDFSFEVIGNPETVAAALASCRESHGVCVIIGLIIG 299
Query: 981 SQISL*PHVAIEWTHLERSYF 1043
Q+++ H+ L+ S +
Sbjct: 300 VQLNISGHLFFTGRSLKGSVY 320
>ref|NP_001069311.1| class V alcohol dehydrogenase [Bos taurus].
Length = 375
Score = 346 bits (888), Expect = 2e-95
Identities = 165/304 (54%), Positives = 217/304 (71%), Gaps = 1/304 (0%)
Frame = +3
Query: 87 MSTAGKVIKCKAAVLWELEKPFSIEEVEVAPPKAYEVRIKMVATGICRSDDHVVRGSLVT 266
M T GK I C AA+ W+ S+EEV+V PPKA EVRIKM++TGIC SDDH ++G +
Sbjct: 1 MDTLGKTITCLAAIAWKTNSSLSLEEVQVEPPKAGEVRIKMISTGICGSDDHAIKGIMPL 60
Query: 267 PLPMILGHEAAGIVESIGEGVTTVKPGDKVIPLFVPQCGKCSVCKHPEANICCKNDLTNP 446
P I GHE AG+VESIGEGV++VKPGDKV+ L VPQC +CS C +P+ N C K D+
Sbjct: 61 KYPFIPGHEGAGLVESIGEGVSSVKPGDKVLTLIVPQCRECSACLNPKGNFCEKQDILPS 120
Query: 447 RGTLSDGTSRFTCKGKPILQFLGTSTFTQYTVVDEMSVAKIDAASPLEKVCLIGCGFSTG 626
G + DGTSRFTCKG+ I TSTF++YTVV E+SV KIDAA+P++K+C+I C TG
Sbjct: 121 SGLMLDGTSRFTCKGEKIYHSFRTSTFSEYTVVPEISVVKIDAAAPMDKICVISCEVPTG 180
Query: 627 YGSAIKVAKVTQGSTCAXXXXXXXXXXXXXXCKAAGAARIIGVDINKDKFAKAKEVGATE 806
YG+A+ AKVT GSTC CKA+GA+RIIGVDIN++KF +A+ +G T+
Sbjct: 181 YGAAVHSAKVTPGSTCVVFGLGGIGSAIVMGCKASGASRIIGVDINEEKFPRARALGVTD 240
Query: 807 CINPQDYEKPIQEVLQEMSGGGVDFSFEVIGRIDTMISALLCCQKAYGVSVIVGV-PPNS 983
C+NP + +KP+QE ++EM+G GVDF+FE IG +TM++A C ++GV +I GV PPNS
Sbjct: 241 CLNPSNLKKPVQEAVKEMTGTGVDFAFEAIGLAETMVAAWDSCHVSHGVCIITGVSPPNS 300
Query: 984 QISL 995
+ SL
Sbjct: 301 KFSL 304
>ref|NP_001095529.1| alcohol dehydrogenase 4 [Bos taurus].
Length = 380
Score = 339 bits (869), Expect = 3e-93
Identities = 171/300 (57%), Positives = 210/300 (70%), Gaps = 5/300 (1%)
Frame = +3
Query: 87 MSTAGKVIKCKAAVLWELEKPFSIEEVEVAPPKAYEVRIKMVATGICRSDDHVVRGSLVT 266
M T GK+IKCKAA+ WE KP S EEVEVAPPK +EVRI+++AT +C SD H++
Sbjct: 1 MGTKGKIIKCKAAIAWEANKPLSNEEVEVAPPKDHEVRIQIIATALCHSDAHILHPQFEG 60
Query: 267 PL-PMILGHEAAGIVESIGEGVTTVKPGDKVIPLFVPQCGKCSVCKHPEANICCK-NDLT 440
+ P+ILGHEAAGIVESIG GVT KP DKVIPL PQCGKC C P N C K
Sbjct: 61 GVFPVILGHEAAGIVESIGPGVTNFKPCDKVIPLHAPQCGKCKFCLSPRTNFCGKLKHFK 120
Query: 441 NPRGT---LSDGTSRFTCKGKPILQFLGTSTFTQYTVVDEMSVAKIDAASPLEKVCLIGC 611
NP G + DGTSRFTCKGKPI F+GTSTF+QYTVV ++++AK++ + LE+VCL+GC
Sbjct: 121 NPMGDQKLMEDGTSRFTCKGKPIYHFMGTSTFSQYTVVSDVNLAKLEDDANLERVCLLGC 180
Query: 612 GFSTGYGSAIKVAKVTQGSTCAXXXXXXXXXXXXXXCKAAGAARIIGVDINKDKFAKAKE 791
FSTGYG+ I AKVT GSTCA CKA+GA+RII VDIN +KF KAK
Sbjct: 181 AFSTGYGAVINNAKVTPGSTCAIFGLGGVGLSAVMGCKASGASRIIVVDINSEKFTKAKA 240
Query: 792 VGATECINPQDYEKPIQEVLQEMSGGGVDFSFEVIGRIDTMISALLCCQKAYGVSVIVGV 971
+GAT+C+NP+D +KPIQEV+ EM+ GGVDF+FE +G M +AL +GV I+GV
Sbjct: 241 LGATDCLNPKDLDKPIQEVIVEMTNGGVDFAFECVGGAKIMRAALDSVTVGWGVCTIIGV 300
>ref|NP_001032397.1| sorbitol dehydrogenase [Bos taurus].
Length = 356
Score = 73.2 bits (178), Expect = 4e-13
Identities = 78/286 (27%), Positives = 122/286 (42%), Gaps = 14/286 (4%)
Frame = +3
Query: 156 IEEVEVAPPKAYEVRIKMVATGICRSDDHVVR----GSLVTPLPMILGHEAAGIVESIGE 323
+E + P EV +KM + GIC SD H + G V PM+LGHEA+G V +G
Sbjct: 21 LENYPIPEPGPNEVLLKMHSVGICGSDVHYWQHGRIGDFVVKKPMVLGHEASGTVVKVGS 80
Query: 324 GVTTVKPGDKV-IPLFVPQCGKCSVCKHPEANICCKNDLTNPRGTLSDGTSRFTCKGKP- 497
V ++PGD+V I P+ E + CK N T+ F C P
Sbjct: 81 LVRHLQPGDRVAIEPGAPR----------ETDEFCKIGRYNLSPTI------FFCATPPD 124
Query: 498 ---ILQFLGTSTFTQYTVVDEMSVAKIDAASPLEKVCLIGCGFSTGYGSAIKVAKVTQGS 668
+ +F + Y + D ++ + PL S G A + A VT G+
Sbjct: 125 DGNLCRFYKHNANFCYKLPDNVTFEEGALIEPL----------SVGI-HACRRAGVTLGN 173
Query: 669 TCAXXXXXXXXXXXXXXCKAAGAARIIGVDINKDKFAKAKEVGATECI-----NPQDYEK 833
KA GAA+++ D++ + +KAKEVGA + +PQ+ K
Sbjct: 174 KVLVCGAGPIGLVSLLAAKAMGAAQVVVTDLSASRLSKAKEVGADFILQISNESPQEIAK 233
Query: 834 PIQEVLQEMSGGGVDFSFEVIGRIDTMISALLCCQKAYGVSVIVGV 971
++ +L G + + E G ++T I A + + G V+VG+
Sbjct: 234 KVEGLL----GSKPEVTIECTG-VETSIQAGIYATHSGGTLVLVGL 274
>ref|NP_858055.1| trans-2-enoyl-CoA reductase, mitochondrial precursor [Bos taurus].
Length = 373
Score = 53.5 bits (127), Expect = 3e-07
Identities = 30/75 (40%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Frame = +3
Query: 144 KPFSIEEVEVAPPKAYEVRIKMVATGICRSDDHVVRGS--LVTPLPMILGHEAAGIVESI 317
K ++ +E+A V +KM+A I SD ++++G+ L+ LP + G+E G V ++
Sbjct: 56 KVVELKNLELAAVGGSHVHVKMLAAPINPSDINMIQGNYGLLPQLPAVGGNEGVGQVVAV 115
Query: 318 GEGVTTVKPGDKVIP 362
G GVT VKPGD VIP
Sbjct: 116 GSGVTGVKPGDWVIP 130
>ref|XP_002694150.1| PREDICTED: crystallin, zeta-like [Bos taurus].
Length = 494
Score = 50.1 bits (118), Expect = 3e-06
Identities = 33/85 (38%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Frame = +3
Query: 117 KAAVLWELEKPFSIEEVEVAPPKAYEVRIKMVATGICRSDDHVVRGSLVT--PLPMILGH 290
+AA+ EL++P IEEV P + +EVR+ + GI +D +G LP G
Sbjct: 172 RAALCAELKRPLVIEEVTPRPVQPHEVRVNVHFCGINFADILACQGQYQERHQLPFTPGM 231
Query: 291 EAAGIVESIGEGVTTVKPGDKVIPL 365
E +G+V G V+TVK GD+VI L
Sbjct: 232 EFSGMVLETGTDVSTVKEGDRVIGL 256
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 41,153,967
Number of extensions: 1087550
Number of successful extensions: 3636
Number of sequences better than 1.0e-05: 8
Number of HSP's gapped: 3627
Number of HSP's successfully gapped: 10
Length of query: 348
Length of database: 17,681,374
Length adjustment: 103
Effective length of query: 245
Effective length of database: 14,273,310
Effective search space: 3496960950
Effective search space used: 3496960950
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002051
(1045 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_535667.2| PREDICTED: similar to Alcohol dehydrogenase gam... 510 e-148
Alignment gi|XP_532181.2| PREDICTED: similar to Alcohol dehydrogenase cla... 375 e-104
Alignment gi|XP_852213.1| PREDICTED: similar to Alcohol dehydrogenase cla... 373 e-103
Alignment gi|XP_535666.2| PREDICTED: similar to Alcohol dehydrogenase 6 [... 345 4e-95
Alignment gi|XP_535665.2| PREDICTED: similar to Alcohol dehydrogenase cla... 342 3e-94
Alignment gi|XP_862312.1| PREDICTED: similar to Alcohol dehydrogenase cla... 340 2e-93
Alignment gi|XP_862285.1| PREDICTED: similar to Alcohol dehydrogenase cla... 323 2e-88
Alignment gi|XP_866573.1| PREDICTED: similar to Alcohol dehydrogenase cla... 305 4e-83
Alignment gi|XP_866558.1| PREDICTED: similar to Alcohol dehydrogenase cla... 229 3e-60
Alignment gi|XP_544659.2| PREDICTED: similar to Sorbitol dehydrogenase (L... 69 7e-12
>ref|XP_535667.2| PREDICTED: similar to Alcohol dehydrogenase gamma chain [Canis
familiaris].
Length = 375
Score = 510 bits (1314), Expect(2) = e-148
Identities = 248/300 (82%), Positives = 270/300 (90%)
Frame = +3
Query: 87 MSTAGKVIKCKAAVLWELEKPFSIEEVEVAPPKAYEVRIKMVATGICRSDDHVVRGSLVT 266
MSTAGKVIKCKAAVLWEL+KPFSIEEVEVAPPKA+EVRIKMVA+GICRSDDHVV G+LV
Sbjct: 1 MSTAGKVIKCKAAVLWELKKPFSIEEVEVAPPKAHEVRIKMVASGICRSDDHVVTGALVV 60
Query: 267 PLPMILGHEAAGIVESIGEGVTTVKPGDKVIPLFVPQCGKCSVCKHPEANICCKNDLTNP 446
PLP+ILGHEAAGIVESIGEGVTTVKPGDKVIPLF PQCGKC+VCKHP+ N+C KNDL+ P
Sbjct: 61 PLPIILGHEAAGIVESIGEGVTTVKPGDKVIPLFTPQCGKCNVCKHPQGNLCVKNDLSKP 120
Query: 447 RGTLSDGTSRFTCKGKPILQFLGTSTFTQYTVVDEMSVAKIDAASPLEKVCLIGCGFSTG 626
RGTL DGT RFTC+GKPI FLG STF+QYTVVDE SVAKIDAASPLEKVCLIGCGFSTG
Sbjct: 121 RGTLQDGTIRFTCRGKPIYHFLGISTFSQYTVVDEFSVAKIDAASPLEKVCLIGCGFSTG 180
Query: 627 YGSAIKVAKVTQGSTCAXXXXXXXXXXXXXXCKAAGAARIIGVDINKDKFAKAKEVGATE 806
YGSA+ VAKVT GSTCA CKAAGAARIIGVDINKDKFAKAKEVGATE
Sbjct: 181 YGSAVNVAKVTPGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE 240
Query: 807 CINPQDYEKPIQEVLQEMSGGGVDFSFEVIGRIDTMISALLCCQKAYGVSVIVGVPPNSQ 986
CI+PQDY++PIQEVL+E+SGG VDFSFEVIGR+DTM++AL CCQ++YGVSVIVGVPPNSQ
Sbjct: 241 CISPQDYKEPIQEVLKEISGGSVDFSFEVIGRLDTMVAALSCCQESYGVSVIVGVPPNSQ 300
Score = 34.7 bits (78), Expect(2) = e-148
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = +1
Query: 997 NPMLLLNGRTWKGAIF 1044
NPMLLL GR+WKGAIF
Sbjct: 305 NPMLLLTGRSWKGAIF 320
>ref|XP_532181.2| PREDICTED: similar to Alcohol dehydrogenase class III chi chain
(Glutathione-dependent formaldehyde dehydrogenase) (FDH)
isoform 1 [Canis familiaris].
Length = 374
Score = 375 bits (962), Expect = e-104
Identities = 182/298 (61%), Positives = 226/298 (75%), Gaps = 1/298 (0%)
Frame = +3
Query: 96 AGKVIKCKAAVLWELEKPFSIEEVEVAPPKAYEVRIKMVATGICRSDDHVVRGSLVT-PL 272
A +VIKCKAAV WE KP SIEEVEVAPPKA+EVRIK++AT +C +D + + G+
Sbjct: 2 ANQVIKCKAAVAWEAGKPLSIEEVEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGSF 61
Query: 273 PMILGHEAAGIVESIGEGVTTVKPGDKVIPLFVPQCGKCSVCKHPEANICCKNDLTNPRG 452
P+ILGHE AGIVES+GEGVT +K GD VIPL++PQCG+C C +P+ N+C K +T +G
Sbjct: 62 PVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKG 121
Query: 453 TLSDGTSRFTCKGKPILQFLGTSTFTQYTVVDEMSVAKIDAASPLEKVCLIGCGFSTGYG 632
+ DGTSRFTCKGK IL ++GTSTF++YTVV ++SVAKID +PL+KVCL+GCG STGYG
Sbjct: 122 LMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYG 181
Query: 633 SAIKVAKVTQGSTCAXXXXXXXXXXXXXXCKAAGAARIIGVDINKDKFAKAKEVGATECI 812
+A+ AKV GSTCA CK AGA+RIIGVDINKDKF++AKE GA+ECI
Sbjct: 182 AALNTAKVEPGSTCAVFGLGGVGLATIMGCKVAGASRIIGVDINKDKFSRAKEFGASECI 241
Query: 813 NPQDYEKPIQEVLQEMSGGGVDFSFEVIGRIDTMISALLCCQKAYGVSVIVGVPPNSQ 986
NPQD+ KPIQEVL EM+ GGVD+SFE IG + M +AL C K +GVSVIVGV + +
Sbjct: 242 NPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVIVGVAASGE 299
>ref|XP_852213.1| PREDICTED: similar to Alcohol dehydrogenase class III chi chain
(Glutathione-dependent formaldehyde dehydrogenase) (FDH)
[Canis familiaris].
Length = 488
Score = 373 bits (958), Expect = e-103
Identities = 181/296 (61%), Positives = 225/296 (76%), Gaps = 1/296 (0%)
Frame = +3
Query: 102 KVIKCKAAVLWELEKPFSIEEVEVAPPKAYEVRIKMVATGICRSDDHVVRGSLVT-PLPM 278
+VIKCKAAV WE KP SIEEVEVAPPKA+EVRIK++AT +C +D + + G+ P+
Sbjct: 118 QVIKCKAAVAWEAGKPLSIEEVEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGSFPV 177
Query: 279 ILGHEAAGIVESIGEGVTTVKPGDKVIPLFVPQCGKCSVCKHPEANICCKNDLTNPRGTL 458
ILGHE AGIVES+GEGVT +K GD VIPL++PQCG+C C +P+ N+C K +T +G +
Sbjct: 178 ILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLM 237
Query: 459 SDGTSRFTCKGKPILQFLGTSTFTQYTVVDEMSVAKIDAASPLEKVCLIGCGFSTGYGSA 638
DGTSRFTCKGK IL ++GTSTF++YTVV ++SVAKID +PL+KVCL+GCG STGYG+A
Sbjct: 238 PDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAA 297
Query: 639 IKVAKVTQGSTCAXXXXXXXXXXXXXXCKAAGAARIIGVDINKDKFAKAKEVGATECINP 818
+ AKV GSTCA CK AGA+RIIGVDINKDKF++AKE GA+ECINP
Sbjct: 298 LNTAKVEPGSTCAVFGLGGVGLATIMGCKVAGASRIIGVDINKDKFSRAKEFGASECINP 357
Query: 819 QDYEKPIQEVLQEMSGGGVDFSFEVIGRIDTMISALLCCQKAYGVSVIVGVPPNSQ 986
QD+ KPIQEVL EM+ GGVD+SFE IG + M +AL C K +GVSVIVGV + +
Sbjct: 358 QDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVIVGVAASGE 413
>ref|XP_535666.2| PREDICTED: similar to Alcohol dehydrogenase 6 [Canis familiaris].
Length = 548
Score = 345 bits (885), Expect = 4e-95
Identities = 169/305 (55%), Positives = 216/305 (70%), Gaps = 1/305 (0%)
Frame = +3
Query: 84 NMSTAGKVIKCKAAVLWELEKPFSIEEVEVAPPKAYEVRIKMVATGICRSDDHVVRGSLV 263
N A K I C+AA+ W SIEEV+V PPKA EVRIK+ +TGIC +DDH ++G L
Sbjct: 180 NHLQAHKTITCRAAIAWAANSTLSIEEVQVEPPKAGEVRIKLASTGICGTDDHAIKGLLS 239
Query: 264 TPLPMILGHEAAGIVESIGEGVTTVKPGDKVIPLFVPQCGKCSVCKHPEANICCKNDLTN 443
P I GHE AGIVESIG+GVT+VKPGDKV+ L +PQC +CS C HP+ N C K D+
Sbjct: 240 AIFPFIPGHEGAGIVESIGKGVTSVKPGDKVLTLIIPQCRECSSCLHPKGNFCEKQDVLP 299
Query: 444 PRGTLSDGTSRFTCKGKPILQFLGTSTFTQYTVVDEMSVAKIDAASPLEKVCLIGCGFST 623
G + DGTSRFTCKGK I TSTFT+YTVV E++VAKID A+P++KV LI C T
Sbjct: 300 SSGLMLDGTSRFTCKGKKIYHSFRTSTFTEYTVVPEIAVAKIDDAAPMDKVSLISCEVPT 359
Query: 624 GYGSAIKVAKVTQGSTCAXXXXXXXXXXXXXXCKAAGAARIIGVDINKDKFAKAKEVGAT 803
GYG+A+ AKVT GSTC CKA+GA+RIIGVDIN++KF +A+ +G T
Sbjct: 360 GYGAAVHSAKVTHGSTCVVFGLGGIGSAIVMGCKASGASRIIGVDINEEKFPRARALGVT 419
Query: 804 ECINPQDYEKPIQEVLQEMSGGGVDFSFEVIGRIDTMISALLCCQKAYGVSVIVGVPP-N 980
+C+NPQ ++KP+Q+V+ EM+G G DF+FE IG DTM++A C ++YGV +IVGV P N
Sbjct: 420 DCLNPQKFKKPVQQVVMEMTGVGADFAFEAIGLSDTMLAAWDSCHRSYGVCLIVGVAPLN 479
Query: 981 SQISL 995
S++SL
Sbjct: 480 SKLSL 484
>ref|XP_535665.2| PREDICTED: similar to Alcohol dehydrogenase class II pi chain
precursor isoform 2 [Canis familiaris].
Length = 379
Score = 342 bits (877), Expect = 3e-94
Identities = 172/307 (56%), Positives = 215/307 (70%), Gaps = 5/307 (1%)
Frame = +3
Query: 87 MSTAGKVIKCKAAVLWELEKPFSIEEVEVAPPKAYEVRIKMVATGICRSDDHVVRGSLVT 266
MST GKVIKCKAA+ WE KP IEE+EVAPPKA+EVR++++AT +C +D H +
Sbjct: 1 MSTMGKVIKCKAAIAWETGKPLCIEEIEVAPPKAHEVRVQIIATALCHTDAHPISPKFKE 60
Query: 267 PL-PMILGHEAAGIVESIGEGVTTVKPGDKVIPLFVPQCGKCSVCKHPEANICCKNDLT- 440
L P+ILGHE AGIVES+G GVT KPGDKVIPL++P C KC C +P N+C K L
Sbjct: 61 ALFPVILGHEGAGIVESVGPGVTNFKPGDKVIPLYMPHCRKCKFCLNPLTNLCKKLSLVK 120
Query: 441 NP---RGTLSDGTSRFTCKGKPILQFLGTSTFTQYTVVDEMSVAKIDAASPLEKVCLIGC 611
NP + + D TSRFTCKGKPI F+GTSTFTQYTVV ++++AKID LE+ CL GC
Sbjct: 121 NPIVDQELMEDKTSRFTCKGKPIYHFMGTSTFTQYTVVSDINLAKIDDDVNLERACLFGC 180
Query: 612 GFSTGYGSAIKVAKVTQGSTCAXXXXXXXXXXXXXXCKAAGAARIIGVDINKDKFAKAKE 791
GFSTGYG+AI AKVT GSTCA CK AGA+RII +DIN +KF KAK
Sbjct: 181 GFSTGYGAAINTAKVTPGSTCAVFGLGGVGLSTIMGCKVAGASRIIAIDINNEKFTKAKA 240
Query: 792 VGATECINPQDYEKPIQEVLQEMSGGGVDFSFEVIGRIDTMISALLCCQKAYGVSVIVGV 971
+G TEC+NP+D+ KPIQEV+ EM+ GGVDF+F+ G + M +AL C +G ++GV
Sbjct: 241 LGITECLNPRDFNKPIQEVIIEMTNGGVDFAFDCAGGPEAMRAALDCTTVGWGSCTLIGV 300
Query: 972 PPNSQIS 992
NS++S
Sbjct: 301 --NSEMS 305
>ref|XP_862312.1| PREDICTED: similar to Alcohol dehydrogenase class II pi chain
precursor isoform 4 [Canis familiaris].
Length = 376
Score = 340 bits (871), Expect = 2e-93
Identities = 171/307 (55%), Positives = 213/307 (69%), Gaps = 5/307 (1%)
Frame = +3
Query: 87 MSTAGKVIKCKAAVLWELEKPFSIEEVEVAPPKAYEVRIKMVATGICRSDDHVVRGSLVT 266
MST GKVIKCKAA+ WE KP IEE+EVAPPKA+EVR++++AT +C +D H +
Sbjct: 1 MSTMGKVIKCKAAIAWETGKPLCIEEIEVAPPKAHEVRVQIIATALCHTDAHPISPKFKE 60
Query: 267 PL-PMILGHEAAGIVESIGEGVTTVKPGDKVIPLFVPQCGKCSVCKHPEANIC----CKN 431
L P+ILGHE AGIVES+G GVT KPGDKVIPL++P C KC C +P N+C K
Sbjct: 61 ALFPVILGHEGAGIVESVGPGVTNFKPGDKVIPLYMPHCRKCKFCLNPLTNLCENLSIKR 120
Query: 432 DLTNPRGTLSDGTSRFTCKGKPILQFLGTSTFTQYTVVDEMSVAKIDAASPLEKVCLIGC 611
D T + D TSRFTCKGKPI F+GTSTFTQYTVV ++++AKID LE+ CL GC
Sbjct: 121 DNTQ---LMEDKTSRFTCKGKPIYHFMGTSTFTQYTVVSDINLAKIDDDVNLERACLFGC 177
Query: 612 GFSTGYGSAIKVAKVTQGSTCAXXXXXXXXXXXXXXCKAAGAARIIGVDINKDKFAKAKE 791
GFSTGYG+AI AKVT GSTCA CK AGA+RII +DIN +KF KAK
Sbjct: 178 GFSTGYGAAINTAKVTPGSTCAVFGLGGVGLSTIMGCKVAGASRIIAIDINNEKFTKAKA 237
Query: 792 VGATECINPQDYEKPIQEVLQEMSGGGVDFSFEVIGRIDTMISALLCCQKAYGVSVIVGV 971
+G TEC+NP+D+ KPIQEV+ EM+ GGVDF+F+ G + M +AL C +G ++GV
Sbjct: 238 LGITECLNPRDFNKPIQEVIIEMTNGGVDFAFDCAGGPEAMRAALDCTTVGWGSCTLIGV 297
Query: 972 PPNSQIS 992
NS++S
Sbjct: 298 --NSEMS 302
>ref|XP_862285.1| PREDICTED: similar to Alcohol dehydrogenase class II pi chain
precursor isoform 3 [Canis familiaris].
Length = 379
Score = 323 bits (827), Expect = 2e-88
Identities = 165/307 (53%), Positives = 208/307 (67%), Gaps = 5/307 (1%)
Frame = +3
Query: 87 MSTAGKVIKCKAAVLWELEKPFSIEEVEVAPPKAYEVRIKMVATGICRSDDHVVRGSLVT 266
MST GKVIKCKAA+ WE KP IEE+EVAPPKA+EVR++++AT +C +D H +
Sbjct: 1 MSTMGKVIKCKAAIAWETGKPLCIEEIEVAPPKAHEVRVQIIATALCHTDAHPISPKFKE 60
Query: 267 PL-PMILGHEAAGIVESIGEGVTTVKPGDKVIPLFVPQCGKCSVCKHPEANICCKNDLT- 440
L P+ILGHE AGIVES+G GVT KPGDKVIPL++P C KC C +P N+C K L
Sbjct: 61 ALFPVILGHEGAGIVESVGPGVTNFKPGDKVIPLYMPHCRKCKFCLNPLTNLCKKLSLVK 120
Query: 441 NP---RGTLSDGTSRFTCKGKPILQFLGTSTFTQYTVVDEMSVAKIDAASPLEKVCLIGC 611
NP + + D TSRFTCKGKPI F+GTSTFTQYTVV ++++AKID LE+ CL GC
Sbjct: 121 NPIVDQELMEDKTSRFTCKGKPIYHFMGTSTFTQYTVVSDINLAKIDDDVNLERACLFGC 180
Query: 612 GFSTGYGSAIKVAKVTQGSTCAXXXXXXXXXXXXXXCKAAGAARIIGVDINKDKFAKAKE 791
GFSTGYG+AI AKVT GSTCA CK AGA+RII +DIN +KF KAK
Sbjct: 181 GFSTGYGAAINTAKVTPGSTCAVFGLGGVGLSTIMGCKVAGASRIIAIDINNEKFTKAKA 240
Query: 792 VGATECINPQDYEKPIQEVLQEMSGGGVDFSFEVIGRIDTMISALLCCQKAYGVSVIVGV 971
+G TEC+NP+D+ KPIQEV+ EM+ G + + + +AL C +G ++GV
Sbjct: 241 LGITECLNPRDFNKPIQEVIIEMTNGAGSLLLPLPLPLALLRAALDCTTVGWGSCTLIGV 300
Query: 972 PPNSQIS 992
NS++S
Sbjct: 301 --NSEMS 305
>ref|XP_866573.1| PREDICTED: similar to Alcohol dehydrogenase class III chi chain
(Glutathione-dependent formaldehyde dehydrogenase) (FDH)
isoform 3 [Canis familiaris].
Length = 328
Score = 305 bits (782), Expect = 4e-83
Identities = 156/298 (52%), Positives = 197/298 (66%), Gaps = 1/298 (0%)
Frame = +3
Query: 96 AGKVIKCKAAVLWELEKPFSIEEVEVAPPKAYEVRIKMVATGICRSDDHVVRGSLVT-PL 272
A +VIKCKAAV WE KP SIEEVEVAPPKA+EVRIK++AT +C +D + + G+
Sbjct: 2 ANQVIKCKAAVAWEAGKPLSIEEVEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGSF 61
Query: 273 PMILGHEAAGIVESIGEGVTTVKPGDKVIPLFVPQCGKCSVCKHPEANICCKNDLTNPRG 452
P+ILGHE AGIVES+GEGVT +K GD VIPL++PQCG+C C +P+ N+C K +T +G
Sbjct: 62 PVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKG 121
Query: 453 TLSDGTSRFTCKGKPILQFLGTSTFTQYTVVDEMSVAKIDAASPLEKVCLIGCGFSTGYG 632
+ DGTSRFTCKGK IL ++GTSTF++YTVV ++SVAKID +PL+KVCL+GCG STGYG
Sbjct: 122 LMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYG 181
Query: 633 SAIKVAKVTQGSTCAXXXXXXXXXXXXXXCKAAGAARIIGVDINKDKFAKAKEVGATECI 812
+A+ AK GA+ECI
Sbjct: 182 AALNTAK----------------------------------------------FGASECI 195
Query: 813 NPQDYEKPIQEVLQEMSGGGVDFSFEVIGRIDTMISALLCCQKAYGVSVIVGVPPNSQ 986
NPQD+ KPIQEVL EM+ GGVD+SFE IG + M +AL C K +GVSVIVGV + +
Sbjct: 196 NPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVIVGVAASGE 253
>ref|XP_866558.1| PREDICTED: similar to Alcohol dehydrogenase class III chi chain
(Glutathione-dependent formaldehyde dehydrogenase) (FDH)
isoform 2 [Canis familiaris].
Length = 252
Score = 229 bits (584), Expect = 3e-60
Identities = 111/177 (62%), Positives = 135/177 (76%)
Frame = +3
Query: 456 LSDGTSRFTCKGKPILQFLGTSTFTQYTVVDEMSVAKIDAASPLEKVCLIGCGFSTGYGS 635
+ DGTSRFTCKGK IL ++GTSTF++YTVV ++SVAKID +PL+KVCL+GCG STGYG+
Sbjct: 1 MPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGA 60
Query: 636 AIKVAKVTQGSTCAXXXXXXXXXXXXXXCKAAGAARIIGVDINKDKFAKAKEVGATECIN 815
A+ AKV GSTCA CK AGA+RIIGVDINKDKF++AKE GA+ECIN
Sbjct: 61 ALNTAKVEPGSTCAVFGLGGVGLATIMGCKVAGASRIIGVDINKDKFSRAKEFGASECIN 120
Query: 816 PQDYEKPIQEVLQEMSGGGVDFSFEVIGRIDTMISALLCCQKAYGVSVIVGVPPNSQ 986
PQD+ KPIQEVL EM+ GGVD+SFE IG + M +AL C K +GVSVIVGV + +
Sbjct: 121 PQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVIVGVAASGE 177
>ref|XP_544659.2| PREDICTED: similar to Sorbitol dehydrogenase (L-iditol
2-dehydrogenase) [Canis familiaris].
Length = 356
Score = 68.9 bits (167), Expect = 7e-12
Identities = 73/281 (25%), Positives = 119/281 (42%), Gaps = 9/281 (3%)
Frame = +3
Query: 156 IEEVEVAPPKAYEVRIKMVATGICRSDDHVVR----GSLVTPLPMILGHEAAGIVESIGE 323
+E + P EV +KM + GIC SD H + G + PM+LGHEA+G V +G
Sbjct: 21 LENYPIPEPGPNEVLLKMHSVGICGSDVHYWQHGRIGDFIVKKPMVLGHEASGTVVKVGS 80
Query: 324 GVTTVKPGDKVIPLFVPQCGKCSVCKHPEANICCKNDLTNPRGTLSDGTSRFTCKGKP-- 497
V +K GD+V P + E + CK G + S F C P
Sbjct: 81 LVKHLKSGDRV--AIEPGALR-------EMDEFCK------IGRYNLSPSIFFCATPPDD 125
Query: 498 --ILQFLGTSTFTQYTVVDEMSVAKIDAASPLEKVCLIGCGFSTGYGSAIKVAKVTQGST 671
+ QF + Y + D ++ + PL S G A + A +T G+
Sbjct: 126 GNLCQFYKHNADFCYKLPDNVTYEEGALIEPL----------SVGI-HACRRAGITLGNK 174
Query: 672 CAXXXXXXXXXXXXXXCKAAGAARIIGVDINKDKFAKAKEVGATECIN-PQDYEKPIQEV 848
KA GA +++ D++ + +KAKEVGA + ++ K I
Sbjct: 175 VLVCGAGPIGLVTLIVAKAMGAGQVLVTDLSASRLSKAKEVGADIVLQISKESPKEIASK 234
Query: 849 LQEMSGGGVDFSFEVIGRIDTMISALLCCQKAYGVSVIVGV 971
+++M G + + E G +++ I + + +A G V+VG+
Sbjct: 235 VEDMLGCKPEATIECTG-VESAIQSGIYATRAGGTLVLVGL 274
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 42,885,181
Number of extensions: 1121568
Number of successful extensions: 3603
Number of sequences better than 1.0e-05: 14
Number of HSP's gapped: 3591
Number of HSP's successfully gapped: 16
Length of query: 348
Length of database: 18,874,504
Length adjustment: 104
Effective length of query: 244
Effective length of database: 15,407,560
Effective search space: 3759444640
Effective search space used: 3759444640
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002051
(1045 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_000660.1| alcohol dehydrogenase 1C [Homo sapiens]. 498 e-145
Alignment gi|NP_000659.2| alcohol dehydrogenase 1B [Homo sapiens]. 498 e-144
Alignment gi|NP_000658.1| alcohol dehydrogenase 1A [Homo sapiens]. 490 e-142
Alignment gi|NP_000664.2| alcohol dehydrogenase class 4 mu/sigma chain is... 419 e-120
Alignment gi|NP_001159976.1| alcohol dehydrogenase class 4 mu/sigma chain... 412 e-117
Alignment gi|NP_000662.3| alcohol dehydrogenase class-3 [Homo sapiens]. 374 e-104
Alignment gi|NP_001095940.1| alcohol dehydrogenase 6 isoform 1 [Homo sapi... 370 e-102
Alignment gi|NP_000663.1| alcohol dehydrogenase 6 isoform 2 [Homo sapiens]. 370 e-102
Alignment gi|NP_000661.2| alcohol dehydrogenase 4 [Homo sapiens]. 339 3e-93
Alignment gi|NP_003095.2| sorbitol dehydrogenase [Homo sapiens]. 69 9e-12
>ref|NP_000660.1| alcohol dehydrogenase 1C [Homo sapiens].
Length = 375
Score = 498 bits (1283), Expect(2) = e-145
Identities = 243/300 (81%), Positives = 266/300 (88%)
Frame = +3
Query: 87 MSTAGKVIKCKAAVLWELEKPFSIEEVEVAPPKAYEVRIKMVATGICRSDDHVVRGSLVT 266
MSTAGKVIKCKAAVLWEL+KPFSIEEVEVAPPKA+EVRIKMVA GICRSD+HVV G+LVT
Sbjct: 1 MSTAGKVIKCKAAVLWELKKPFSIEEVEVAPPKAHEVRIKMVAAGICRSDEHVVSGNLVT 60
Query: 267 PLPMILGHEAAGIVESIGEGVTTVKPGDKVIPLFVPQCGKCSVCKHPEANICCKNDLTNP 446
PLP+ILGHEAAGIVES+GEGVTTVKPGDKVIPLF PQCGKC +CK+PE+N C KNDL NP
Sbjct: 61 PLPVILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRICKNPESNYCLKNDLGNP 120
Query: 447 RGTLSDGTSRFTCKGKPILQFLGTSTFTQYTVVDEMSVAKIDAASPLEKVCLIGCGFSTG 626
RGTL DGT RFTC GKPI F+G STF+QYTVVDE +VAKIDAASPLEKVCLIGCGFSTG
Sbjct: 121 RGTLQDGTRRFTCSGKPIHHFVGVSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTG 180
Query: 627 YGSAIKVAKVTQGSTCAXXXXXXXXXXXXXXCKAAGAARIIGVDINKDKFAKAKEVGATE 806
YGSA+KVAKVT GSTCA CKAAGAARII VDINKDKFAKAKE+GATE
Sbjct: 181 YGSAVKVAKVTPGSTCAVFGLGGVGLSVVMGCKAAGAARIIAVDINKDKFAKAKELGATE 240
Query: 807 CINPQDYEKPIQEVLQEMSGGGVDFSFEVIGRIDTMISALLCCQKAYGVSVIVGVPPNSQ 986
CINPQDY+KPIQEVL+EM+ GGVDFSFEVIGR+DTM+++LLCC +A G SVIVGVPP+SQ
Sbjct: 241 CINPQDYKKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPDSQ 300
Score = 36.2 bits (82), Expect(2) = e-145
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +1
Query: 997 NPMLLLNGRTWKGAIF 1044
NPMLLL GRTWKGAIF
Sbjct: 305 NPMLLLTGRTWKGAIF 320
>ref|NP_000659.2| alcohol dehydrogenase 1B [Homo sapiens].
Length = 375
Score = 498 bits (1281), Expect(2) = e-144
Identities = 243/300 (81%), Positives = 265/300 (88%)
Frame = +3
Query: 87 MSTAGKVIKCKAAVLWELEKPFSIEEVEVAPPKAYEVRIKMVATGICRSDDHVVRGSLVT 266
MSTAGKVIKCKAAVLWE++KPFSIE+VEVAPPKAYEVRIKMVA GIC +DDHVV G+LVT
Sbjct: 1 MSTAGKVIKCKAAVLWEVKKPFSIEDVEVAPPKAYEVRIKMVAVGICHTDDHVVSGNLVT 60
Query: 267 PLPMILGHEAAGIVESIGEGVTTVKPGDKVIPLFVPQCGKCSVCKHPEANICCKNDLTNP 446
PLP+ILGHEAAGIVES+GEGVTTVKPGDKVIPLF PQCGKC VCK+PE+N C KNDL NP
Sbjct: 61 PLPVILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNP 120
Query: 447 RGTLSDGTSRFTCKGKPILQFLGTSTFTQYTVVDEMSVAKIDAASPLEKVCLIGCGFSTG 626
RGTL DGT RFTC+GKPI FLGTSTF+QYTVVDE +VAKIDAASPLEKVCLIGCGFSTG
Sbjct: 121 RGTLQDGTRRFTCRGKPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTG 180
Query: 627 YGSAIKVAKVTQGSTCAXXXXXXXXXXXXXXCKAAGAARIIGVDINKDKFAKAKEVGATE 806
YGSA+ VAKVT GSTCA CKAAGAARII VDINKDKFAKAKE+GATE
Sbjct: 181 YGSAVNVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATE 240
Query: 807 CINPQDYEKPIQEVLQEMSGGGVDFSFEVIGRIDTMISALLCCQKAYGVSVIVGVPPNSQ 986
CINPQDY+KPIQEVL+EM+ GGVDFSFEVIGR+DTM+++LLCC +A G SVIVGVPP SQ
Sbjct: 241 CINPQDYKKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPASQ 300
Score = 34.7 bits (78), Expect(2) = e-144
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = +1
Query: 997 NPMLLLNGRTWKGAIF 1044
NPMLLL GRTWKGA++
Sbjct: 305 NPMLLLTGRTWKGAVY 320
>ref|NP_000658.1| alcohol dehydrogenase 1A [Homo sapiens].
Length = 375
Score = 490 bits (1262), Expect(2) = e-142
Identities = 238/300 (79%), Positives = 266/300 (88%)
Frame = +3
Query: 87 MSTAGKVIKCKAAVLWELEKPFSIEEVEVAPPKAYEVRIKMVATGICRSDDHVVRGSLVT 266
MSTAGKVIKCKAAVLWEL+KPFSIEEVEVAPPKA+EVRIKMVA GIC +DDHVV G++VT
Sbjct: 1 MSTAGKVIKCKAAVLWELKKPFSIEEVEVAPPKAHEVRIKMVAVGICGTDDHVVSGTMVT 60
Query: 267 PLPMILGHEAAGIVESIGEGVTTVKPGDKVIPLFVPQCGKCSVCKHPEANICCKNDLTNP 446
PLP+ILGHEAAGIVES+GEGVTTVKPGDKVIPL +PQCGKC +CK+PE+N C KND++NP
Sbjct: 61 PLPVILGHEAAGIVESVGEGVTTVKPGDKVIPLAIPQCGKCRICKNPESNYCLKNDVSNP 120
Query: 447 RGTLSDGTSRFTCKGKPILQFLGTSTFTQYTVVDEMSVAKIDAASPLEKVCLIGCGFSTG 626
+GTL DGTSRFTC+ KPI FLG STF+QYTVVDE +VAKIDAASPLEKVCLIGCGFSTG
Sbjct: 121 QGTLQDGTSRFTCRRKPIHHFLGISTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTG 180
Query: 627 YGSAIKVAKVTQGSTCAXXXXXXXXXXXXXXCKAAGAARIIGVDINKDKFAKAKEVGATE 806
YGSA+ VAKVT GSTCA CKAAGAARII VDINKDKFAKAKE+GATE
Sbjct: 181 YGSAVNVAKVTPGSTCAVFGLGGVGLSAIMGCKAAGAARIIAVDINKDKFAKAKELGATE 240
Query: 807 CINPQDYEKPIQEVLQEMSGGGVDFSFEVIGRIDTMISALLCCQKAYGVSVIVGVPPNSQ 986
CINPQDY+KPIQEVL+EM+ GGVDFSFEVIGR+DTM+++LLCC +A G SVIVGVPP+SQ
Sbjct: 241 CINPQDYKKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPDSQ 300
Score = 33.9 bits (76), Expect(2) = e-142
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +1
Query: 997 NPMLLLNGRTWKGAI 1041
NPMLLL GRTWKGAI
Sbjct: 305 NPMLLLTGRTWKGAI 319
>ref|NP_000664.2| alcohol dehydrogenase class 4 mu/sigma chain isoform 2 [Homo
sapiens].
Length = 386
Score = 419 bits (1078), Expect(2) = e-120
Identities = 197/306 (64%), Positives = 246/306 (80%)
Frame = +3
Query: 72 RESRNMSTAGKVIKCKAAVLWELEKPFSIEEVEVAPPKAYEVRIKMVATGICRSDDHVVR 251
++ M TAGKVIKCKAAVLWE ++PFSIEE+EVAPPK EVRIK++ATGICR+DDHV++
Sbjct: 8 QDKDRMGTAGKVIKCKAAVLWEQKQPFSIEEIEVAPPKTKEVRIKILATGICRTDDHVIK 67
Query: 252 GSLVTPLPMILGHEAAGIVESIGEGVTTVKPGDKVIPLFVPQCGKCSVCKHPEANICCKN 431
G++V+ P+I+GHEA GIVESIGEGVTTVKPGDKVIPLF+PQC +C+ C++P+ N+C ++
Sbjct: 68 GTMVSKFPVIVGHEATGIVESIGEGVTTVKPGDKVIPLFLPQCRECNACRNPDGNLCIRS 127
Query: 432 DLTNPRGTLSDGTSRFTCKGKPILQFLGTSTFTQYTVVDEMSVAKIDAASPLEKVCLIGC 611
D+T RG L+DGT+RFTCKGKP+ F+ TSTFT+YTVVDE SVAKID A+P EKVCLIGC
Sbjct: 128 DITG-RGVLADGTTRFTCKGKPVHHFMNTSTFTEYTVVDESSVAKIDDAAPPEKVCLIGC 186
Query: 612 GFSTGYGSAIKVAKVTQGSTCAXXXXXXXXXXXXXXCKAAGAARIIGVDINKDKFAKAKE 791
GFSTGYG+A+K KV GSTC CK+AGA+RIIG+D+NKDKF KA
Sbjct: 187 GFSTGYGAAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMA 246
Query: 792 VGATECINPQDYEKPIQEVLQEMSGGGVDFSFEVIGRIDTMISALLCCQKAYGVSVIVGV 971
VGATECI+P+D KPI EVL EM+G V ++FEVIG ++TMI AL C YG SV+VGV
Sbjct: 247 VGATECISPKDSTKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHMNYGTSVVVGV 306
Query: 972 PPNSQI 989
PP++++
Sbjct: 307 PPSAKM 312
Score = 30.8 bits (68), Expect(2) = e-120
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +1
Query: 997 NPMLLLNGRTWKGAIF 1044
+PMLL GRTWKG +F
Sbjct: 316 DPMLLFTGRTWKGCVF 331
>ref|NP_001159976.1| alcohol dehydrogenase class 4 mu/sigma chain isoform 1 [Homo
sapiens].
Length = 394
Score = 412 bits (1059), Expect(2) = e-117
Identities = 194/303 (64%), Positives = 242/303 (79%)
Frame = +3
Query: 81 RNMSTAGKVIKCKAAVLWELEKPFSIEEVEVAPPKAYEVRIKMVATGICRSDDHVVRGSL 260
+ MS VIKCKAAVLWE ++PFSIEE+EVAPPK EVRIK++ATGICR+DDHV++G++
Sbjct: 19 QRMSVEAGVIKCKAAVLWEQKQPFSIEEIEVAPPKTKEVRIKILATGICRTDDHVIKGTM 78
Query: 261 VTPLPMILGHEAAGIVESIGEGVTTVKPGDKVIPLFVPQCGKCSVCKHPEANICCKNDLT 440
V+ P+I+GHEA GIVESIGEGVTTVKPGDKVIPLF+PQC +C+ C++P+ N+C ++D+T
Sbjct: 79 VSKFPVIVGHEATGIVESIGEGVTTVKPGDKVIPLFLPQCRECNACRNPDGNLCIRSDIT 138
Query: 441 NPRGTLSDGTSRFTCKGKPILQFLGTSTFTQYTVVDEMSVAKIDAASPLEKVCLIGCGFS 620
RG L+DGT+RFTCKGKP+ F+ TSTFT+YTVVDE SVAKID A+P EKVCLIGCGFS
Sbjct: 139 G-RGVLADGTTRFTCKGKPVHHFMNTSTFTEYTVVDESSVAKIDDAAPPEKVCLIGCGFS 197
Query: 621 TGYGSAIKVAKVTQGSTCAXXXXXXXXXXXXXXCKAAGAARIIGVDINKDKFAKAKEVGA 800
TGYG+A+K KV GSTC CK+AGA+RIIG+D+NKDKF KA VGA
Sbjct: 198 TGYGAAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGA 257
Query: 801 TECINPQDYEKPIQEVLQEMSGGGVDFSFEVIGRIDTMISALLCCQKAYGVSVIVGVPPN 980
TECI+P+D KPI EVL EM+G V ++FEVIG ++TMI AL C YG SV+VGVPP+
Sbjct: 258 TECISPKDSTKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHMNYGTSVVVGVPPS 317
Query: 981 SQI 989
+++
Sbjct: 318 AKM 320
Score = 30.8 bits (68), Expect(2) = e-117
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +1
Query: 997 NPMLLLNGRTWKGAIF 1044
+PMLL GRTWKG +F
Sbjct: 324 DPMLLFTGRTWKGCVF 339
>ref|NP_000662.3| alcohol dehydrogenase class-3 [Homo sapiens].
Length = 374
Score = 374 bits (959), Expect(2) = e-104
Identities = 180/298 (60%), Positives = 225/298 (75%), Gaps = 1/298 (0%)
Frame = +3
Query: 96 AGKVIKCKAAVLWELEKPFSIEEVEVAPPKAYEVRIKMVATGICRSDDHVVRGSLVTP-L 272
A +VIKCKAAV WE KP SIEE+EVAPPKA+EVRIK++AT +C +D + + G+
Sbjct: 2 ANEVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCF 61
Query: 273 PMILGHEAAGIVESIGEGVTTVKPGDKVIPLFVPQCGKCSVCKHPEANICCKNDLTNPRG 452
P+ILGHE AGIVES+GEGVT +K GD VIPL++PQCG+C C +P+ N+C K +T +G
Sbjct: 62 PVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKG 121
Query: 453 TLSDGTSRFTCKGKPILQFLGTSTFTQYTVVDEMSVAKIDAASPLEKVCLIGCGFSTGYG 632
+ DGTSRFTCKGK IL ++GTSTF++YTVV ++SVAKID +PL+KVCL+GCG STGYG
Sbjct: 122 LMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYG 181
Query: 633 SAIKVAKVTQGSTCAXXXXXXXXXXXXXXCKAAGAARIIGVDINKDKFAKAKEVGATECI 812
+A+ AK+ GS CA CK AGA+RIIGVDINKDKFA+AKE GATECI
Sbjct: 182 AAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECI 241
Query: 813 NPQDYEKPIQEVLQEMSGGGVDFSFEVIGRIDTMISALLCCQKAYGVSVIVGVPPNSQ 986
NPQD+ KPIQEVL EM+ GGVD+SFE IG + M +AL C K +GVSV+VGV + +
Sbjct: 242 NPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGE 299
Score = 25.0 bits (53), Expect(2) = e-104
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +1
Query: 1000 PMLLLNGRTWKGAIF 1044
P L+ GRTWKG F
Sbjct: 305 PFQLVTGRTWKGTAF 319
>ref|NP_001095940.1| alcohol dehydrogenase 6 isoform 1 [Homo sapiens].
Length = 375
Score = 370 bits (949), Expect = e-102
Identities = 187/300 (62%), Positives = 227/300 (75%), Gaps = 1/300 (0%)
Frame = +3
Query: 87 MSTAGKVIKCKAAVLWELEKPFSIEEVEVAPPKAYEVRIKMVATGICRSDDHVVRGSLVT 266
MST G+VI+CKAA+LW+ PFSIEEVEVAPPKA EVRIK+VATG+C ++ V+ +
Sbjct: 1 MSTTGQVIRCKAAILWKPGAPFSIEEVEVAPPKAKEVRIKVVATGLCGTEMKVLGSKHLD 60
Query: 267 PL-PMILGHEAAGIVESIGEGVTTVKPGDKVIPLFVPQCGKCSVCKHPEANICCKNDLTN 443
L P ILGHE AGIVESIGEGV+TVKPGDKVI LF+PQCG+C+ C + E N C + +
Sbjct: 61 LLYPTILGHEGAGIVESIGEGVSTVKPGDKVITLFLPQCGECTSCLNSEGNFCIQFKQSK 120
Query: 444 PRGTLSDGTSRFTCKGKPILQFLGTSTFTQYTVVDEMSVAKIDAASPLEKVCLIGCGFST 623
+ +SDGTSRFTCKGK I F TSTF +YTV+ E+SVAKIDA +PLEKVCLI CGFST
Sbjct: 121 TQ-LMSDGTSRFTCKGKSIYHFGNTSTFCEYTVIKEISVAKIDAVAPLEKVCLISCGFST 179
Query: 624 GYGSAIKVAKVTQGSTCAXXXXXXXXXXXXXXCKAAGAARIIGVDINKDKFAKAKEVGAT 803
G+G+AI AKVT GSTCA CKAAGAARIIGVD+NK+KF KA+E+GAT
Sbjct: 180 GFGAAINTAKVTPGSTCAVFGLGGVGLSVVMGCKAAGAARIIGVDVNKEKFKKAQELGAT 239
Query: 804 ECINPQDYEKPIQEVLQEMSGGGVDFSFEVIGRIDTMISALLCCQKAYGVSVIVGVPPNS 983
EC+NPQD +KPIQEVL +M+ G+DF FE IG +D + +AL C ++YGV V+VGV P S
Sbjct: 240 ECLNPQDLKKPIQEVLFDMTDAGIDFCFEAIGNLDVLAAALASCNESYGVCVVVGVLPAS 299
>ref|NP_000663.1| alcohol dehydrogenase 6 isoform 2 [Homo sapiens].
Length = 368
Score = 370 bits (949), Expect = e-102
Identities = 187/300 (62%), Positives = 227/300 (75%), Gaps = 1/300 (0%)
Frame = +3
Query: 87 MSTAGKVIKCKAAVLWELEKPFSIEEVEVAPPKAYEVRIKMVATGICRSDDHVVRGSLVT 266
MST G+VI+CKAA+LW+ PFSIEEVEVAPPKA EVRIK+VATG+C ++ V+ +
Sbjct: 1 MSTTGQVIRCKAAILWKPGAPFSIEEVEVAPPKAKEVRIKVVATGLCGTEMKVLGSKHLD 60
Query: 267 PL-PMILGHEAAGIVESIGEGVTTVKPGDKVIPLFVPQCGKCSVCKHPEANICCKNDLTN 443
L P ILGHE AGIVESIGEGV+TVKPGDKVI LF+PQCG+C+ C + E N C + +
Sbjct: 61 LLYPTILGHEGAGIVESIGEGVSTVKPGDKVITLFLPQCGECTSCLNSEGNFCIQFKQSK 120
Query: 444 PRGTLSDGTSRFTCKGKPILQFLGTSTFTQYTVVDEMSVAKIDAASPLEKVCLIGCGFST 623
+ +SDGTSRFTCKGK I F TSTF +YTV+ E+SVAKIDA +PLEKVCLI CGFST
Sbjct: 121 TQ-LMSDGTSRFTCKGKSIYHFGNTSTFCEYTVIKEISVAKIDAVAPLEKVCLISCGFST 179
Query: 624 GYGSAIKVAKVTQGSTCAXXXXXXXXXXXXXXCKAAGAARIIGVDINKDKFAKAKEVGAT 803
G+G+AI AKVT GSTCA CKAAGAARIIGVD+NK+KF KA+E+GAT
Sbjct: 180 GFGAAINTAKVTPGSTCAVFGLGGVGLSVVMGCKAAGAARIIGVDVNKEKFKKAQELGAT 239
Query: 804 ECINPQDYEKPIQEVLQEMSGGGVDFSFEVIGRIDTMISALLCCQKAYGVSVIVGVPPNS 983
EC+NPQD +KPIQEVL +M+ G+DF FE IG +D + +AL C ++YGV V+VGV P S
Sbjct: 240 ECLNPQDLKKPIQEVLFDMTDAGIDFCFEAIGNLDVLAAALASCNESYGVCVVVGVLPAS 299
>ref|NP_000661.2| alcohol dehydrogenase 4 [Homo sapiens].
Length = 380
Score = 339 bits (869), Expect = 3e-93
Identities = 171/305 (56%), Positives = 214/305 (70%), Gaps = 5/305 (1%)
Frame = +3
Query: 87 MSTAGKVIKCKAAVLWELEKPFSIEEVEVAPPKAYEVRIKMVATGICRSDDHVVRGSLV- 263
M T GKVIKCKAA+ WE KP IEEVEVAPPKA+EVRI+++AT +C +D V+
Sbjct: 1 MGTKGKVIKCKAAIAWEAGKPLCIEEVEVAPPKAHEVRIQIIATSLCHTDATVIDSKFEG 60
Query: 264 TPLPMILGHEAAGIVESIGEGVTTVKPGDKVIPLFVPQCGKCSVCKHPEANICCK-NDLT 440
P+I+GHEAAGIVESIG GVT VKPGDKVIPL+ P C KC C P N+C K ++L
Sbjct: 61 LAFPVIVGHEAAGIVESIGPGVTNVKPGDKVIPLYAPLCRKCKFCLSPLTNLCGKISNLK 120
Query: 441 NPRGT---LSDGTSRFTCKGKPILQFLGTSTFTQYTVVDEMSVAKIDAASPLEKVCLIGC 611
+P + D TSRFTCKGKP+ F GTSTF+QYTVV ++++AKID + LE+VCL+GC
Sbjct: 121 SPASDQQLMEDKTSRFTCKGKPVYHFFGTSTFSQYTVVSDINLAKIDDDANLERVCLLGC 180
Query: 612 GFSTGYGSAIKVAKVTQGSTCAXXXXXXXXXXXXXXCKAAGAARIIGVDINKDKFAKAKE 791
GFSTGYG+AI AKVT GSTCA CKAAGA+RIIG+DIN +KF KAK
Sbjct: 181 GFSTGYGAAINNAKVTPGSTCAVFGLGGVGLSAVMGCKAAGASRIIGIDINSEKFVKAKA 240
Query: 792 VGATECINPQDYEKPIQEVLQEMSGGGVDFSFEVIGRIDTMISALLCCQKAYGVSVIVGV 971
+GAT+C+NP+D KPIQEV+ E++ GGVDF+ + G +TM +AL C +G +GV
Sbjct: 241 LGATDCLNPRDLHKPIQEVIIELTKGGVDFALDCAGGSETMKAALDCTTAGWGSCTFIGV 300
Query: 972 PPNSQ 986
S+
Sbjct: 301 AAGSK 305
>ref|NP_003095.2| sorbitol dehydrogenase [Homo sapiens].
Length = 357
Score = 68.6 bits (166), Expect = 9e-12
Identities = 65/245 (26%), Positives = 101/245 (41%), Gaps = 8/245 (3%)
Frame = +3
Query: 156 IEEVEVAPPKAYEVRIKMVATGICRSDDHVVR----GSLVTPLPMILGHEAAGIVESIGE 323
+E + P EV ++M + GIC SD H G+ + PM+LGHEA+G VE +G
Sbjct: 22 LENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGS 81
Query: 324 GVTTVKPGDKVIPLFVPQCGKCSVCKHPEANICCKNDLTNPRGTLSDGTSRFTCKGKP-- 497
V +KPGD+V E +ND G + S F C P
Sbjct: 82 SVKHLKPGDRVA---------------IEPGAPRENDEFCKMGRYNLSPSIFFCATPPDD 126
Query: 498 --ILQFLGTSTFTQYTVVDEMSVAKIDAASPLEKVCLIGCGFSTGYGSAIKVAKVTQGST 671
+ +F + Y + D ++ + PL S G A + VT G
Sbjct: 127 GNLCRFYKHNAAFCYKLPDNVTFEEGALIEPL----------SVGI-HACRRGGVTLGHK 175
Query: 672 CAXXXXXXXXXXXXXXCKAAGAARIIGVDINKDKFAKAKEVGATECINPQDYEKPIQEVL 851
KA GAA+++ D++ + +KAKE+GA + + E P QE+
Sbjct: 176 VLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGA-DLVLQISKESP-QEIA 233
Query: 852 QEMSG 866
+++ G
Sbjct: 234 RKVEG 238
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 42,204,640
Number of extensions: 1106187
Number of successful extensions: 3762
Number of sequences better than 1.0e-05: 11
Number of HSP's gapped: 3752
Number of HSP's successfully gapped: 17
Length of query: 348
Length of database: 18,297,164
Length adjustment: 103
Effective length of query: 245
Effective length of database: 14,901,872
Effective search space: 3650958640
Effective search space used: 3650958640
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002051
(1045 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_031435.1| alcohol dehydrogenase 1 [Mus musculus]. 483 e-140
Alignment gi|NP_033756.2| alcohol dehydrogenase class 4 mu/sigma chain [M... 419 e-120
Alignment gi|NP_031436.2| alcohol dehydrogenase class-3 [Mus musculus]. 367 e-102
Alignment gi|NP_081221.1| alcohol dehydrogenase 6A (class V) [Mus musculu... 353 1e-97
Alignment gi|XP_003086377.1| PREDICTED: alcohol dehydrogenase 1 [Mus musc... 351 5e-97
Alignment gi|NP_036126.2| alcohol dehydrogenase 4 [Mus musculus]. 308 5e-84
Alignment gi|NP_666238.1| sorbitol dehydrogenase [Mus musculus]. 67 2e-11
Alignment gi|NP_001028456.1| quinone oxidoreductase-like protein 2 [Mus m... 50 3e-06
>ref|NP_031435.1| alcohol dehydrogenase 1 [Mus musculus].
Length = 375
Score = 483 bits (1243), Expect(2) = e-140
Identities = 233/300 (77%), Positives = 260/300 (86%)
Frame = +3
Query: 87 MSTAGKVIKCKAAVLWELEKPFSIEEVEVAPPKAYEVRIKMVATGICRSDDHVVRGSLVT 266
MSTAGKVIKCKAAVLWEL KPF+IE++EVAPPKA+EVRIKMVATG+CRSDDHVV G+LVT
Sbjct: 1 MSTAGKVIKCKAAVLWELHKPFTIEDIEVAPPKAHEVRIKMVATGVCRSDDHVVSGTLVT 60
Query: 267 PLPMILGHEAAGIVESIGEGVTTVKPGDKVIPLFVPQCGKCSVCKHPEANICCKNDLTNP 446
PLP +LGHE AGIVES+GEGVT VKPGDKVIPLF PQCG+C +CKHPE+N C ++DL P
Sbjct: 61 PLPAVLGHEGAGIVESVGEGVTCVKPGDKVIPLFSPQCGECRICKHPESNFCSRSDLLMP 120
Query: 447 RGTLSDGTSRFTCKGKPILQFLGTSTFTQYTVVDEMSVAKIDAASPLEKVCLIGCGFSTG 626
RGTL +GTSRF+CKGK I F+ TSTF+QYTVVD+++VAKID ASPL+KVCLIGCGFSTG
Sbjct: 121 RGTLREGTSRFSCKGKQIHNFISTSTFSQYTVVDDIAVAKIDGASPLDKVCLIGCGFSTG 180
Query: 627 YGSAIKVAKVTQGSTCAXXXXXXXXXXXXXXCKAAGAARIIGVDINKDKFAKAKEVGATE 806
YGSA+KVAKVT GSTCA CKAAGAARII VDINKDKFAKAKE+GATE
Sbjct: 181 YGSAVKVAKVTPGSTCAVFGLGGVGLSVIIGCKAAGAARIIAVDINKDKFAKAKELGATE 240
Query: 807 CINPQDYEKPIQEVLQEMSGGGVDFSFEVIGRIDTMISALLCCQKAYGVSVIVGVPPNSQ 986
CINPQDY KPIQEVLQEM+ GGVDFSFEVIGR+DTM SALL C A GVSV+VGVPPN+Q
Sbjct: 241 CINPQDYSKPIQEVLQEMTDGGVDFSFEVIGRLDTMTSALLSCHAACGVSVVVGVPPNAQ 300
Score = 35.0 bits (79), Expect(2) = e-140
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +1
Query: 997 NPMLLLNGRTWKGAIF 1044
NPMLLL GRTWKGAIF
Sbjct: 305 NPMLLLLGRTWKGAIF 320
>ref|NP_033756.2| alcohol dehydrogenase class 4 mu/sigma chain [Mus musculus].
Length = 374
Score = 419 bits (1076), Expect(2) = e-120
Identities = 193/301 (64%), Positives = 244/301 (81%)
Frame = +3
Query: 87 MSTAGKVIKCKAAVLWELEKPFSIEEVEVAPPKAYEVRIKMVATGICRSDDHVVRGSLVT 266
M TAGKVIKCKAAVLW + +PFSIEE+EVAPPKA EVR+K++ATGICR+DDH+++GS+V+
Sbjct: 1 MGTAGKVIKCKAAVLWGVNQPFSIEEIEVAPPKAKEVRVKILATGICRTDDHIIKGSMVS 60
Query: 267 PLPMILGHEAAGIVESIGEGVTTVKPGDKVIPLFVPQCGKCSVCKHPEANICCKNDLTNP 446
P+I+GHEA G+VES+GEGVTTV+PGDKVIPLF+PQC +C+ C +PE N+C ++DLT
Sbjct: 61 KFPVIVGHEAVGVVESVGEGVTTVRPGDKVIPLFLPQCRECNACLNPEGNLCIRSDLTG- 119
Query: 447 RGTLSDGTSRFTCKGKPILQFLGTSTFTQYTVVDEMSVAKIDAASPLEKVCLIGCGFSTG 626
RG L+DGT+RFTCKGKP+ F+ TSTFT+YTV+DE SVAK+D A+P EK CLIGCGFSTG
Sbjct: 120 RGVLADGTTRFTCKGKPVQHFMNTSTFTEYTVLDESSVAKVDGAAPPEKACLIGCGFSTG 179
Query: 627 YGSAIKVAKVTQGSTCAXXXXXXXXXXXXXXCKAAGAARIIGVDINKDKFAKAKEVGATE 806
YG+A+K AKVT GSTC CKAAGA+RIIG+DINKDKF KA VGATE
Sbjct: 180 YGAAVKTAKVTPGSTCVVFGLGGVGLSVIMGCKAAGASRIIGIDINKDKFQKALAVGATE 239
Query: 807 CINPQDYEKPIQEVLQEMSGGGVDFSFEVIGRIDTMISALLCCQKAYGVSVIVGVPPNSQ 986
CI+P+D KPI EVL +M+G + ++FEVIGR++TM+ AL C YG SV+VG PP+++
Sbjct: 240 CISPKDSTKPISEVLSDMTGNTIQYTFEVIGRLETMVDALSSCHMNYGTSVVVGAPPSAK 299
Query: 987 I 989
+
Sbjct: 300 M 300
Score = 30.8 bits (68), Expect(2) = e-120
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +1
Query: 997 NPMLLLNGRTWKGAIF 1044
+PMLL GRTWKG +F
Sbjct: 304 DPMLLFTGRTWKGCVF 319
>ref|NP_031436.2| alcohol dehydrogenase class-3 [Mus musculus].
Length = 374
Score = 367 bits (942), Expect(2) = e-102
Identities = 177/298 (59%), Positives = 224/298 (75%), Gaps = 1/298 (0%)
Frame = +3
Query: 96 AGKVIKCKAAVLWELEKPFSIEEVEVAPPKAYEVRIKMVATGICRSDDHVVRGSLVTP-L 272
A +VI+CKAAV WE KP SIEE+EVAPPKA+EVRIK++AT +C +D + + G+
Sbjct: 2 ANQVIRCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKILATAVCHTDAYTLSGADPEGCF 61
Query: 273 PMILGHEAAGIVESIGEGVTTVKPGDKVIPLFVPQCGKCSVCKHPEANICCKNDLTNPRG 452
P+ILGHE AGIVES+GEGVT +K GD VIPL++PQCG+C C +P+ N+C K +T +G
Sbjct: 62 PVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKG 121
Query: 453 TLSDGTSRFTCKGKPILQFLGTSTFTQYTVVDEMSVAKIDAASPLEKVCLIGCGFSTGYG 632
+ DGTSRFTCKGK + F+GTSTF++YTVV ++SVAKID ++PL+KVCL+GCG STGYG
Sbjct: 122 LMPDGTSRFTCKGKSVFHFMGTSTFSEYTVVADISVAKIDPSAPLDKVCLLGCGISTGYG 181
Query: 633 SAIKVAKVTQGSTCAXXXXXXXXXXXXXXCKAAGAARIIGVDINKDKFAKAKEVGATECI 812
+A+ AKV GSTCA CK AGA+RIIG+DINKDKFAKAKE GA+ECI
Sbjct: 182 AAVNTAKVEPGSTCAVFGLGGVGLAVIMGCKVAGASRIIGIDINKDKFAKAKEFGASECI 241
Query: 813 NPQDYEKPIQEVLQEMSGGGVDFSFEVIGRIDTMISALLCCQKAYGVSVIVGVPPNSQ 986
+PQD+ K IQEVL EM+ GGVD+SFE IG + M SAL K +GVSV+VGV + +
Sbjct: 242 SPQDFSKSIQEVLVEMTDGGVDYSFECIGNVKVMRSALEAAHKGWGVSVVVGVAASGE 299
Score = 25.0 bits (53), Expect(2) = e-102
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +1
Query: 1000 PMLLLNGRTWKGAIF 1044
P L+ GRTWKG F
Sbjct: 305 PFQLVTGRTWKGTAF 319
>ref|NP_081221.1| alcohol dehydrogenase 6A (class V) [Mus musculus].
Length = 375
Score = 353 bits (906), Expect = 1e-97
Identities = 165/304 (54%), Positives = 220/304 (72%), Gaps = 1/304 (0%)
Frame = +3
Query: 87 MSTAGKVIKCKAAVLWELEKPFSIEEVEVAPPKAYEVRIKMVATGICRSDDHVVRGSLVT 266
M+T GK I C+AA+ W P SIEEV+V PPK+ EVRIKM+++GIC SDDHV++G LV
Sbjct: 1 MNTLGKTITCRAAIAWAKNSPLSIEEVQVEPPKSGEVRIKMISSGICGSDDHVLKGELVV 60
Query: 267 PLPMILGHEAAGIVESIGEGVTTVKPGDKVIPLFVPQCGKCSVCKHPEANICCKNDLTNP 446
P+I GHE AGIVES+G+GV ++KPGDKV+ L +PQC +C C HP+ N C K D+
Sbjct: 61 NFPLIPGHEGAGIVESVGDGVCSMKPGDKVLILIIPQCRECDACLHPKGNFCYKQDVLPC 120
Query: 447 RGTLSDGTSRFTCKGKPILQFLGTSTFTQYTVVDEMSVAKIDAASPLEKVCLIGCGFSTG 626
G + DGTSRF+C+G+ I TS+FT+YTVV E++ KID A+P++KVCLI CGF TG
Sbjct: 121 SGVMLDGTSRFSCRGQKIYHSFRTSSFTEYTVVPEIAAVKIDDAAPMDKVCLISCGFPTG 180
Query: 627 YGSAIKVAKVTQGSTCAXXXXXXXXXXXXXXCKAAGAARIIGVDINKDKFAKAKEVGATE 806
YG+A+ AKVT GSTC CKA+GA+RIIGVDIN++KF +A+ +G T+
Sbjct: 181 YGAAVNSAKVTPGSTCVVFGLGGVGSAIVMGCKASGASRIIGVDINEEKFPRARALGVTD 240
Query: 807 CINPQDYEKPIQEVLQEMSGGGVDFSFEVIGRIDTMISALLCCQKAYGVSVIVGV-PPNS 983
C+NP EKP+QEV+ EM+G GVDF+FE IG +DTM++A C +YGV +I G+ P ++
Sbjct: 241 CLNPNKLEKPVQEVVMEMTGVGVDFAFEAIGLVDTMVAAWNSCNNSYGVCLIAGLAPSDA 300
Query: 984 QISL 995
Q+SL
Sbjct: 301 QLSL 304
>ref|XP_003086377.1| PREDICTED: alcohol dehydrogenase 1 [Mus musculus].
Length = 384
Score = 351 bits (901), Expect = 5e-97
Identities = 165/316 (52%), Positives = 227/316 (71%), Gaps = 1/316 (0%)
Frame = +3
Query: 93 TAGKVIKCKAAVLWELEKPFSIEEVEVAPPKAYEVRIKMVATGICRSDDHVVRGSLVTPL 272
T+ +I+C+AAV W P SIEEVEV PPKA EVR+K++A+GIC +D+H + G + TP
Sbjct: 10 TSSNIIRCRAAVAWTTNAPLSIEEVEVDPPKAGEVRVKIIASGICGTDNHTLEGKMKTPF 69
Query: 273 PMILGHEAAGIVESIGEGVTTVKPGDKVIPLFVPQCGKCSVCKHPEANICCKNDLTNPRG 452
P+ILGHE AG+VESIG GVTTVKPGDKV+ +P+C +C C +P+ N C K ++ +P G
Sbjct: 70 PVILGHEGAGVVESIGPGVTTVKPGDKVLMFPLPECRECFYCLYPKGNFCEKENILSPTG 129
Query: 453 TLSDGTSRFTCKGKPILQFLGTSTFTQYTVVDEMSVAKIDAASPLEKVCLIGCGFSTGYG 632
+ DGTSRFTC+GK I +GTSTFT+YTVV E++VAKI+AA+P++ VC++ C TG+G
Sbjct: 130 LMLDGTSRFTCRGKKIYNIMGTSTFTEYTVVHEIAVAKIEAAAPMDTVCIMSCAVPTGFG 189
Query: 633 SAIKVAKVTQGSTCAXXXXXXXXXXXXXXCKAAGAARIIGVDINKDKFAKAKEVGATECI 812
+ A+VT GS+C CKA+GA RIIGVDIN++KF +A+ +G T+C+
Sbjct: 190 AVFNTAQVTPGSSCVVFGLGGIGSAIVMACKASGACRIIGVDINEEKFPRARALGVTDCL 249
Query: 813 NPQDYEKPIQEVLQEMSGGGVDFSFEVIGRIDTMISALLCCQKAYGVSVIVGV-PPNSQI 989
NP +KP+QEV++EM+G GVDF+FE IG I+TM++AL C ++YGV VI+GV P SQ+
Sbjct: 250 NPNKLKKPVQEVVKEMTGVGVDFAFEAIGLIETMVAALKSCNRSYGVCVIMGVAPTGSQL 309
Query: 990 SL*PHVAIEWTHLERS 1037
S P V + L+ S
Sbjct: 310 SFDPLVLLPGRTLKSS 325
>ref|NP_036126.2| alcohol dehydrogenase 4 [Mus musculus].
Length = 377
Score = 308 bits (789), Expect = 5e-84
Identities = 149/298 (50%), Positives = 200/298 (67%), Gaps = 4/298 (1%)
Frame = +3
Query: 87 MSTAGKVIKCKAAVLWELEKPFSIEEVEVAPPKAYEVRIKMVATGICRSDDHVVRGSLVT 266
M T GKVIKCKAA+ W+ P IEE+EV+PPKA EVRI+++AT +C +D +
Sbjct: 1 MGTQGKVIKCKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPKKKA 60
Query: 267 PLPMILGHEAAGIVESIGEGVTTVKPGDKVIPLFVPQCGKCSVCKHPEANICCK----ND 434
P++LGHE AGIVES+G GVT KPGDKVIP F PQC +C +C P N+C K
Sbjct: 61 LFPVVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKY 120
Query: 435 LTNPRGTLSDGTSRFTCKGKPILQFLGTSTFTQYTVVDEMSVAKIDAASPLEKVCLIGCG 614
T + + D TSRFTCKG+ I F+G S+F+QYTVV E ++A++D + LE+VCLIGCG
Sbjct: 121 PTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLARVDDEANLERVCLIGCG 180
Query: 615 FSTGYGSAIKVAKVTQGSTCAXXXXXXXXXXXXXXCKAAGAARIIGVDINKDKFAKAKEV 794
FS+GYG+AI AKVT STCA CK AGA+RII +DIN +KF KAK +
Sbjct: 181 FSSGYGAAINTAKVTPSSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKAL 240
Query: 795 GATECINPQDYEKPIQEVLQEMSGGGVDFSFEVIGRIDTMISALLCCQKAYGVSVIVG 968
GAT+C+NP++ +KP+Q+V+ E++ GGVD+S + G T+ +A+ C +G +VG
Sbjct: 241 GATDCLNPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVG 298
>ref|NP_666238.1| sorbitol dehydrogenase [Mus musculus].
Length = 357
Score = 67.4 bits (163), Expect = 2e-11
Identities = 72/270 (26%), Positives = 113/270 (41%), Gaps = 10/270 (3%)
Frame = +3
Query: 192 EVRIKMVATGICRSDDHVVR----GSLVTPLPMILGHEAAGIVESIGEGVTTVKPGDKV- 356
+V +KM + GIC SD H G V PM+LGHEAAG V +GE V +KPGD+V
Sbjct: 34 DVLLKMHSVGICGSDVHYWEHGRIGDFVVKKPMVLGHEAAGTVTKVGELVKHLKPGDRVA 93
Query: 357 IPLFVPQCGKCSVCKHPEANICCKNDLTNPRGTLSDGTSRFTCKGKP----ILQFLGTST 524
I VP+ E + CK N T+ F C P + +F +
Sbjct: 94 IEPGVPR----------EVDEYCKIGRYNLTPTI------FFCATPPDDGNLCRFYKHNA 137
Query: 525 FTQYTVVDEMSVAKIDAASPLEKVCLIGCGFSTGYGSAIKVAKVTQGSTCAXXXXXXXXX 704
Y + D ++ + PL V + C + V+ G+
Sbjct: 138 DFCYKLPDSVTFEEGALIEPL-SVGIYAC----------RRGSVSLGNKVLVCGAGPVGM 186
Query: 705 XXXXXCKAAGAARIIGVDINKDKFAKAKEVGATECIN-PQDYEKPIQEVLQEMSGGGVDF 881
KA GAA+++ D++ + KAKEVGA I ++ + I ++ + G +
Sbjct: 187 VTLLVAKAMGAAQVVVTDLSASRLTKAKEVGADFTIQVGKETPQEIASKVESLLGSKPEV 246
Query: 882 SFEVIGRIDTMISALLCCQKAYGVSVIVGV 971
+ E G ++ + + + G VIVG+
Sbjct: 247 TIECTG-AESSVQTGIYATHSGGTLVIVGM 275
>ref|NP_001028456.1| quinone oxidoreductase-like protein 2 [Mus musculus].
Length = 350
Score = 50.1 bits (118), Expect = 3e-06
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Frame = +3
Query: 117 KAAVLWELEKPFSIEEVEVAPPKAYEVRIKMVATGICRSDDHVVRGSLVT--PLPMILGH 290
+AA+ EL++P +I+EV P EVR+ + G+ +D RG PLP G
Sbjct: 28 RAALCTELKQPLTIQEVAPRPVGPQEVRVDVHFCGVNFADILACRGQYQEKPPLPFTPGM 87
Query: 291 EAAGIVESIGEGVTTVKPGDKVI 359
E +G V G V+TVK GD+VI
Sbjct: 88 EFSGAVLETGTDVSTVKKGDRVI 110
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 35,840,783
Number of extensions: 929811
Number of successful extensions: 2919
Number of sequences better than 1.0e-05: 8
Number of HSP's gapped: 2914
Number of HSP's successfully gapped: 11
Length of query: 348
Length of database: 15,617,559
Length adjustment: 102
Effective length of query: 246
Effective length of database: 12,553,887
Effective search space: 3088256202
Effective search space used: 3088256202
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002051
(1045 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001230868.1| alcohol dehydrogenase 1C (class I), gamma po... 565 e-161
Alignment gi|XP_003357116.1| PREDICTED: alcohol dehydrogenase class 4 mu/... 408 e-116
Alignment gi|XP_003129360.1| PREDICTED: alcohol dehydrogenase class-3-lik... 378 e-106
Alignment gi|XP_003129359.1| PREDICTED: alcohol dehydrogenase 4 [Sus scro... 344 4e-95
Alignment gi|XP_001927487.1| PREDICTED: sorbitol dehydrogenase [Sus scrof... 71 9e-13
Alignment gi|XP_003127794.2| PREDICTED: trans-2-enoyl-CoA reductase, mito... 51 9e-07
>ref|NP_001230868.1| alcohol dehydrogenase 1C (class I), gamma polypeptide [Sus scrofa].
Length = 375
Score = 565 bits (1455), Expect = e-161
Identities = 286/320 (89%), Positives = 290/320 (90%), Gaps = 1/320 (0%)
Frame = +3
Query: 87 MSTAGKVIKCKAAVLWELEKPFSIEEVEVAPPKAYEVRIKMVATGICRSDDHVVRGSLVT 266
MSTAGKVIKCKAAVLWELEKPFSIEEVEVAPPKAYEVRIKMVATGICRSDDHVV GSLVT
Sbjct: 1 MSTAGKVIKCKAAVLWELEKPFSIEEVEVAPPKAYEVRIKMVATGICRSDDHVVHGSLVT 60
Query: 267 PLPMILGHEAAGIVESIGEGVTTVKPGDKVIPLFVPQCGKCSVCKHPEANICCKNDLTNP 446
PLP ILGHEAAGIVESIGEGVTTVKPGDKVIPLFVPQCGKCSVCKHPEAN CCKNDLT P
Sbjct: 61 PLPTILGHEAAGIVESIGEGVTTVKPGDKVIPLFVPQCGKCSVCKHPEANFCCKNDLTKP 120
Query: 447 RGTLSDGTSRFTCKGKPILQFLGTSTFTQYTVVDEMSVAKIDAASPLEKVCLIGCGFSTG 626
RGTLSDGTSRFTCKGKPILQFLGTSTFTQYTVVDEMSVAKIDAASPLEKVCLIGCGFSTG
Sbjct: 121 RGTLSDGTSRFTCKGKPILQFLGTSTFTQYTVVDEMSVAKIDAASPLEKVCLIGCGFSTG 180
Query: 627 YGSAIKVAKVTQGSTCAXXXXXXXXXXXXXXCKAAGAARIIGVDINKDKFAKAKEVGATE 806
YGSAIKVAKVTQGSTCA CKAAGAARIIGVDINKDKFAKAKEVGATE
Sbjct: 181 YGSAIKVAKVTQGSTCAVFGLGGVGLSVVMGCKAAGAARIIGVDINKDKFAKAKEVGATE 240
Query: 807 CINPQDYEKPIQEVLQEMSGGGVDFSFEVIGRIDTMISALLCCQKAYGVSVIVGVPPNSQ 986
CINPQDYEKPIQEVLQEMSGGGVDFSFE IGRIDTMISALLCCQKAYGVSVIVGVPPNSQ
Sbjct: 241 CINPQDYEKPIQEVLQEMSGGGVDFSFEAIGRIDTMISALLCCQKAYGVSVIVGVPPNSQ 300
Query: 987 -ISL*PHVAIEWTHLERSYF 1043
IS+ P + + E + F
Sbjct: 301 NISINPMLLLNGRTWEGAIF 320
>ref|XP_003357116.1| PREDICTED: alcohol dehydrogenase class 4 mu/sigma chain-like [Sus
scrofa].
Length = 549
Score = 408 bits (1048), Expect(2) = e-116
Identities = 196/313 (62%), Positives = 244/313 (77%), Gaps = 4/313 (1%)
Frame = +3
Query: 63 LACRESRNMSTAGKVIKCKAAVLWELEKPFSIEEVEVAPPKAYEVRIKMVATGICRSDDH 242
L C N +VIKCKAAVLWE ++PFSIEE+EVAPPKA EVRIK++ATGICR+DDH
Sbjct: 44 LLCLVLGNPFPLSRVIKCKAAVLWEQKQPFSIEEIEVAPPKAKEVRIKILATGICRTDDH 103
Query: 243 VVRGSLVTPLPMILGHEAAGIVESIGEGVTTVKPGDKVIPLFVPQCGKCSVCKHPEANIC 422
V++G +V+ P+I+GHEA G+VESIG+GVTTVKPGDKVIPLF+PQC +CS C++P+ N+C
Sbjct: 104 VIKGEMVSKFPVIVGHEATGVVESIGDGVTTVKPGDKVIPLFLPQCRECSFCRNPDGNLC 163
Query: 423 CKNDLTNPRGTLSDGTSRFTCKGKPILQFLGTSTFTQYTVVDEMSVAKIDAASPLEKVCL 602
++D+T RG L+DGT+RFTCKG+P+ F+ TST+T+YTVVDE SVAKID A+P EKVCL
Sbjct: 164 VRSDITG-RGVLADGTTRFTCKGQPVYHFMNTSTYTEYTVVDETSVAKIDDAAPPEKVCL 222
Query: 603 IGCGFSTGYGSAIKVAKVTQGSTCA----XXXXXXXXXXXXXXCKAAGAARIIGVDINKD 770
IGCGFSTGYG+A+K KVT GSTC CK AGA+RIIG+D+NKD
Sbjct: 223 IGCGFSTGYGAAVKTGKVTPGSTCVVFGLGRSGLSSGLSVIMGCKLAGASRIIGIDLNKD 282
Query: 771 KFAKAKEVGATECINPQDYEKPIQEVLQEMSGGGVDFSFEVIGRIDTMISALLCCQKAYG 950
KF KA VGATECI+P+D KPI EVL EM+G V +SFEVIGR++TMI AL C YG
Sbjct: 283 KFEKAMAVGATECISPKDSPKPISEVLSEMTGDTVGYSFEVIGRLETMIDALASCNMNYG 342
Query: 951 VSVIVGVPPNSQI 989
VSV+VG PP++++
Sbjct: 343 VSVVVGAPPSAKM 355
Score = 30.8 bits (68), Expect(2) = e-116
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +1
Query: 997 NPMLLLNGRTWKGAIF 1044
+PMLL GRTWKG +F
Sbjct: 359 DPMLLFTGRTWKGCVF 374
>ref|XP_003129360.1| PREDICTED: alcohol dehydrogenase class-3-like [Sus scrofa].
Length = 385
Score = 378 bits (970), Expect(2) = e-106
Identities = 184/307 (59%), Positives = 231/307 (75%), Gaps = 1/307 (0%)
Frame = +3
Query: 69 CRESRNMSTAGKVIKCKAAVLWELEKPFSIEEVEVAPPKAYEVRIKMVATGICRSDDHVV 248
C +S +M A +VIKCKAAV WE KP SIEE+EVAPPKA+EVRIK++AT +C +D + +
Sbjct: 6 CSQSEDM--ANQVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTL 63
Query: 249 RGSLVT-PLPMILGHEAAGIVESIGEGVTTVKPGDKVIPLFVPQCGKCSVCKHPEANICC 425
G+ P+ILGHE AGIVES+GEGVT +K GD VIPL++PQCG+C C +P+ N+C
Sbjct: 64 SGADPEGSFPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQ 123
Query: 426 KNDLTNPRGTLSDGTSRFTCKGKPILQFLGTSTFTQYTVVDEMSVAKIDAASPLEKVCLI 605
K +T +G + DGTSRFTCKGK IL ++GTSTF++YTVV ++SVAKID +PL+KVCL+
Sbjct: 124 KIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLL 183
Query: 606 GCGFSTGYGSAIKVAKVTQGSTCAXXXXXXXXXXXXXXCKAAGAARIIGVDINKDKFAKA 785
GCG STGYG+A+ AKV GSTCA CK AGA+RIIGVDINKDKFA+A
Sbjct: 184 GCGVSTGYGAAVNTAKVEPGSTCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARA 243
Query: 786 KEVGATECINPQDYEKPIQEVLQEMSGGGVDFSFEVIGRIDTMISALLCCQKAYGVSVIV 965
KE GA+ECINPQD+ KPIQEVL EM+ GGVD+SFE IG + M +AL C K +GVSV+V
Sbjct: 244 KEFGASECINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVV 303
Query: 966 GVPPNSQ 986
GV + +
Sbjct: 304 GVAASGE 310
Score = 25.0 bits (53), Expect(2) = e-106
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +1
Query: 1000 PMLLLNGRTWKGAIF 1044
P L+ GRTWKG F
Sbjct: 316 PFQLVTGRTWKGTAF 330
>ref|XP_003129359.1| PREDICTED: alcohol dehydrogenase 4 [Sus scrofa].
Length = 380
Score = 344 bits (883), Expect = 4e-95
Identities = 168/300 (56%), Positives = 214/300 (71%), Gaps = 5/300 (1%)
Frame = +3
Query: 87 MSTAGKVIKCKAAVLWELEKPFSIEEVEVAPPKAYEVRIKMVATGICRSDDHVVRGSLVT 266
M T GKVIKCKAA+ WE KP +IEEVEVAPPKA+EVRI+++AT +C +D H++
Sbjct: 1 MGTKGKVIKCKAAIAWEANKPLNIEEVEVAPPKAHEVRIQIIATALCHTDAHIIHPQYEG 60
Query: 267 PL-PMILGHEAAGIVESIGEGVTTVKPGDKVIPLFVPQCGKCSVCKHPEANICCK-NDLT 440
P+ILGHEAAGIVES+G GVT +KPGDKVIPL++PQCGKC C P N C K +
Sbjct: 61 AFFPVILGHEAAGIVESVGPGVTNIKPGDKVIPLYLPQCGKCKFCLSPRTNFCGKLKNFR 120
Query: 441 NP---RGTLSDGTSRFTCKGKPILQFLGTSTFTQYTVVDEMSVAKIDAASPLEKVCLIGC 611
NP + + D TSRFTCKGKPI F+GTSTF+QYTVV ++++ KID + LE+VCL+GC
Sbjct: 121 NPIDDQKLMEDETSRFTCKGKPIYHFMGTSTFSQYTVVSDVNLVKIDDDANLERVCLLGC 180
Query: 612 GFSTGYGSAIKVAKVTQGSTCAXXXXXXXXXXXXXXCKAAGAARIIGVDINKDKFAKAKE 791
FSTGYG+ + AKVT GSTCA CKAAGA+RII +DI +KF KAK
Sbjct: 181 AFSTGYGAVVNTAKVTPGSTCAIFGLGGIGLSAVIGCKAAGASRIIVIDIKNEKFTKAKA 240
Query: 792 VGATECINPQDYEKPIQEVLQEMSGGGVDFSFEVIGRIDTMISALLCCQKAYGVSVIVGV 971
+GAT+C+NP++ +KPIQEV+ EM+ GGVDF+FE +G D M +AL +G+ I+GV
Sbjct: 241 LGATDCLNPRELDKPIQEVIIEMTNGGVDFAFECVGGADIMRAALDSVTAGWGLCTIIGV 300
>ref|XP_001927487.1| PREDICTED: sorbitol dehydrogenase [Sus scrofa].
Length = 356
Score = 71.2 bits (173), Expect = 9e-13
Identities = 78/286 (27%), Positives = 124/286 (43%), Gaps = 14/286 (4%)
Frame = +3
Query: 156 IEEVEVAPPKAYEVRIKMVATGICRSDDHVVR----GSLVTPLPMILGHEAAGIVESIGE 323
+E + P EV +KM + GIC SD H + G+ V PM+LGHEA+G V +G
Sbjct: 21 LENYPIPEPGPNEVLLKMHSVGICGSDVHYWQHGRIGNFVVKKPMVLGHEASGTVVKVGS 80
Query: 324 GVTTVKPGDKV-IPLFVPQCGKCSVCKHPEANICCKNDLTNPRGTLSDGTSRFTCKGKP- 497
VT +KPGD+V I P+ E++ CK N T+ F C P
Sbjct: 81 LVTHLKPGDRVAIEPGAPR----------ESDEFCKIGRYNLSPTI------FFCATPPD 124
Query: 498 ---ILQFLGTSTFTQYTVVDEMSVAKIDAASPLEKVCLIGCGFSTGYGSAIKVAKVTQGS 668
+ +F ++ Y + D ++ + PL S G A + A VT G+
Sbjct: 125 DGNLCRFYKHNSNFCYKLPDNVTFEEGALIEPL----------SVGI-HACRRAGVTLGN 173
Query: 669 TCAXXXXXXXXXXXXXXCKAAGAARIIGVDINKDKFAKAKEVGATECI-----NPQDYEK 833
KA GAA+++ D++ + +KAKEVGA + +PQ+
Sbjct: 174 KVFVCGAGPIGLVSLLVAKAMGAAQVVVSDLSAARLSKAKEVGADFILQISNESPQEIAN 233
Query: 834 PIQEVLQEMSGGGVDFSFEVIGRIDTMISALLCCQKAYGVSVIVGV 971
++ +L G + + E G ++ I A + + G V+VG+
Sbjct: 234 QVEGLL----GCKPEVTIECTG-VEASIQAGIYATHSGGTLVLVGL 274
>ref|XP_003127794.2| PREDICTED: trans-2-enoyl-CoA reductase, mitochondrial-like [Sus
scrofa].
Length = 403
Score = 51.2 bits (121), Expect = 9e-07
Identities = 29/75 (38%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Frame = +3
Query: 144 KPFSIEEVEVAPPKAYEVRIKMVATGICRSDDHVVRGS--LVTPLPMILGHEAAGIVESI 317
K ++ +E+A +V +KM+A I SD ++++G+ L+ LP + G+E G V ++
Sbjct: 57 KVVELKNLELAAVGGSDVHVKMLAAPINPSDINMIQGNYGLLPQLPAVGGNEGVGQVVAV 116
Query: 318 GEGVTTVKPGDKVIP 362
G VT VKPGD VIP
Sbjct: 117 GSHVTGVKPGDWVIP 131
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 26,487,319
Number of extensions: 697698
Number of successful extensions: 2202
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 2197
Number of HSP's successfully gapped: 8
Length of query: 348
Length of database: 11,343,932
Length adjustment: 100
Effective length of query: 248
Effective length of database: 8,854,232
Effective search space: 2195849536
Effective search space used: 2195849536
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002051
(1045 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr08 521 e-145
>Sscrofa_Chr08
|| Length = 148491826
Score = 521 bits (263), Expect = e-145
Identities = 263/263 (100%)
Strand = Plus / Plus
Query: 652 aggtcacccagggctccacctgtgccgtgttcggcctcggaggagtcggcctgtctgttg 711
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130236263 aggtcacccagggctccacctgtgccgtgttcggcctcggaggagtcggcctgtctgttg 130236322
Query: 712 tcatgggctgtaaagcagctggagcagccaggatcattggagtggacatcaacaaagaca 771
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130236323 tcatgggctgtaaagcagctggagcagccaggatcattggagtggacatcaacaaagaca 130236382
Query: 772 aatttgcaaaagccaaagaggtgggtgccaccgagtgcatcaaccctcaggactatgaga 831
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130236383 aatttgcaaaagccaaagaggtgggtgccaccgagtgcatcaaccctcaggactatgaga 130236442
Query: 832 aacctatccaggaggtgctacaggaaatgagcggtggaggcgtggatttttcatttgaag 891
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130236443 aacctatccaggaggtgctacaggaaatgagcggtggaggcgtggatttttcatttgaag 130236502
Query: 892 tcattgggaggattgacactatg 914
|||||||||||||||||||||||
Sbjct: 130236503 tcattgggaggattgacactatg 130236525
Score = 283 bits (143), Expect = 9e-74
Identities = 143/143 (100%)
Strand = Plus / Plus
Query: 205 agatggtggccacaggaatctgtcgctcagatgaccatgtggttcgtggatccttggtca 264
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130231025 agatggtggccacaggaatctgtcgctcagatgaccatgtggttcgtggatccttggtca 130231084
Query: 265 cacctcttcctatgatcctaggtcatgaggcggctggcattgtggagagcattggtgagg 324
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130231085 cacctcttcctatgatcctaggtcatgaggcggctggcattgtggagagcattggtgagg 130231144
Query: 325 gggtgactacggtaaaaccaggt 347
|||||||||||||||||||||||
Sbjct: 130231145 gggtgactacggtaaaaccaggt 130231167
Score = 234 bits (118), Expect = 8e-59
Identities = 132/134 (98%), Gaps = 2/134 (1%)
Strand = Plus / Plus
Query: 914 gatttctgccttgctgtgctgtcaaaaagcatacggcgtaagcgtcattgtaggagtacc 973
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130239793 gatttctgccttgctgtgctgtcaaaaagcatacggcgtaagcgtcattgtaggagtacc 130239852
Query: 974 tcctaattctc-aaatatctctat-aaccccatgttgctattgaatggacgcacctggaa 1031
||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 130239853 tcctaattctcaaaatatctctataaaccccatgttgctattgaatggacgcacctggaa 130239912
Query: 1032 aggagctatttttg 1045
||||||||||||||
Sbjct: 130239913 aggagctatttttg 130239926
Score = 214 bits (108), Expect = 7e-53
Identities = 108/108 (100%)
Strand = Plus / Minus
Query: 1 tctgctcaatatatctgctgtacgtacttgagcagaggagaatctgcaagaattcacatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130305477 tctgctcaatatatctgctgtacgtacttgagcagaggagaatctgcaagaattcacatc 130305418
Query: 61 tcctggcctgcagagaaagcagaaacatgagcacagcaggaaaagtaa 108
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130305417 tcctggcctgcagagaaagcagaaacatgagcacagcaggaaaagtaa 130305370
Score = 182 bits (92), Expect = 3e-43
Identities = 92/92 (100%)
Strand = Plus / Plus
Query: 342 ccaggtgataaagtcatcccactctttgttccccagtgtggaaagtgcagtgtttgtaaa 401
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130233969 ccaggtgataaagtcatcccactctttgttccccagtgtggaaagtgcagtgtttgtaaa 130234028
Query: 402 caccctgaagccaacatttgctgcaaaaatga 433
||||||||||||||||||||||||||||||||
Sbjct: 130234029 caccctgaagccaacatttgctgcaaaaatga 130234060
Score = 61.9 bits (31), Expect = 6e-07
Identities = 103/127 (81%)
Strand = Plus / Plus
Query: 699 ggcctgtctgttgtcatgggctgtaaagcagctggagcagccaggatcattggagtggac 758
||||| || ||| ||||||||||||| ||||| ||| ||||||||||||| | |||
Sbjct: 130177524 ggcctttcggttatcatgggctgtaagttggctggtgcatccaggatcattgggattgac 130177583
Query: 759 atcaacaaagacaaatttgcaaaagccaaagaggtgggtgccaccgagtgcatcaaccct 818
|||||||||||||||||| ||||||| | || || ||||| |||||||||| ||||
Sbjct: 130177584 ctcaacaaagacaaatttgagaaagccatggctgtaggggccactgagtgcatcagccct 130177643
Query: 819 caggact 825
||||||
Sbjct: 130177644 aaggact 130177650
Score = 60.0 bits (30), Expect = 3e-06
Identities = 96/118 (81%)
Strand = Plus / Plus
Query: 663 ggctccacctgtgccgtgttcggcctcggaggagtcggcctgtctgttgtcatgggctgt 722
||||| || ||||| || || ||||| |||||||| || || | ||| |||||||||||
Sbjct: 130462216 ggctctacttgtgctgtctttggcctgggaggagttggattggcagttatcatgggctgt 130462275
Query: 723 aaagcagctggagcagccaggatcattggagtggacatcaacaaagacaaatttgcaa 780
|| | ||||| ||| || |||||||||| ||||||||||| ||||| ||||| ||||
Sbjct: 130462276 aaggtggctggtgcatcccggatcattggtgtggacatcaataaagataaattcgcaa 130462333
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 32,102,925
Number of extensions: 210
Number of successful extensions: 210
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 209
Number of HSP's successfully gapped: 7
Length of query: 1045
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 1024
Effective length of database: 2,808,413,156
Effective search space: 2875815071744
Effective search space used: 2875815071744
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)