Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002089
(2192 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001029640.1| glutaminyl-tRNA synthetase [Bos taurus]. 1399 0.0
Alignment gi|NP_001230249.1| glutamyl-prolyl-tRNA synthetase [Bos taurus]. 240 3e-63
Alignment gi|XP_002698070.1| PREDICTED: glutamyl-tRNA synthetase 2-like [... 57 9e-08
>ref|NP_001029640.1| glutaminyl-tRNA synthetase [Bos taurus].
Length = 775
Score = 1399 bits (3622), Expect = 0.0
Identities = 680/712 (95%), Positives = 692/712 (97%)
Frame = +3
Query: 15 MAALDSLSLFTGLGLSEHKARETLKNTALSAQLREAATQAQQTLGSTIDKATGTLLYGLA 194
MAALDSLSLFTGLGLSE KARETLKNT LSAQLREAATQAQQTLGS+IDKATGTLLYGLA
Sbjct: 1 MAALDSLSLFTGLGLSEQKARETLKNTVLSAQLREAATQAQQTLGSSIDKATGTLLYGLA 60
Query: 195 SRLRDPRRLSFLVSYIASRKIHTETQLSAALEYVRSHPLDPINTMDFEQECGVGVIVTPE 374
SRLRDPRRLSFLVSYI SRKIHTETQLSAALEYVRSHPLDPINT DFEQECGVGV+VTPE
Sbjct: 61 SRLRDPRRLSFLVSYITSRKIHTETQLSAALEYVRSHPLDPINTEDFEQECGVGVVVTPE 120
Query: 375 QIEEAVEAAINHHRSKLLVERYHFNMGLLMGEARAALKWADGKMIKHEVDMQVLHLLGPK 554
QIEEAVEAAIN HR+KLLVERYHF+MGLLMGEARAALKWADGKMIKHEVDMQVLHLLGPK
Sbjct: 121 QIEEAVEAAINRHRAKLLVERYHFSMGLLMGEARAALKWADGKMIKHEVDMQVLHLLGPK 180
Query: 555 TESDLEKKPKVAKARLEEKDRVTAKDVVENGEAVVQTLSLMEQLRGEALKFHKPGENYKT 734
TE+DLEKKPKVAKAR EE D+ TAKDVVENGE VVQTLSLMEQLRGEALKFHKPGENYKT
Sbjct: 181 TETDLEKKPKVAKARPEETDQRTAKDVVENGEVVVQTLSLMEQLRGEALKFHKPGENYKT 240
Query: 735 PGYVTTPHTMDLLKQHLEITGGQIRTRFPPEPNGILHIGHAKAINFNFGYAKANNGICFL 914
PGYVTTPHTMDLLKQHL+ITGGQ+RTRFPPEPNGILHIGHAKAINFNFGYAKANNGICFL
Sbjct: 241 PGYVTTPHTMDLLKQHLDITGGQVRTRFPPEPNGILHIGHAKAINFNFGYAKANNGICFL 300
Query: 915 RFDDTNPEKEEAKFFTAICDMVAWLGYTPYKVTYASDYFDQLYAWAVELIHRGLAYVCHQ 1094
RFDDTNPEKEEAKFFTAI DMVAWLGYTPYKVTYASDYFDQLYAWAVELI R AYVCHQ
Sbjct: 301 RFDDTNPEKEEAKFFTAIYDMVAWLGYTPYKVTYASDYFDQLYAWAVELIRRDQAYVCHQ 360
Query: 1095 RGEELKGHNPLPSPWRDRPIEESLLLFEAMRKGKFAEGEATLRMKLVMEDGKMDPVAYRV 1274
RGEELKGHNPLPSPWRDRPIEESLLLFEAMRKGKFAEGEATLRMKLVMEDGKMDPVAYRV
Sbjct: 361 RGEELKGHNPLPSPWRDRPIEESLLLFEAMRKGKFAEGEATLRMKLVMEDGKMDPVAYRV 420
Query: 1275 KYTPHHRTGDTWCIYPTYDYTHCLCDSIEHITHSLCTKEFQARRSSYFWLCNALDVYCPV 1454
KYTPHHRTGDTWCIYPTYDYTHCLCDSIEHITHSLCTKEFQARRSSYFWLCNALDVYCPV
Sbjct: 421 KYTPHHRTGDTWCIYPTYDYTHCLCDSIEHITHSLCTKEFQARRSSYFWLCNALDVYCPV 480
Query: 1455 QWEYGRLNLHYAVVSKRKILQLVAAGAVRDWDDPRLFTLTALRRRGFPPEAINNFCARVG 1634
QWEYGRLNLHYAVVSKRKILQLVAAGAVRDWDDPRLFTLTALRRRGFPPEAINNFCARVG
Sbjct: 481 QWEYGRLNLHYAVVSKRKILQLVAAGAVRDWDDPRLFTLTALRRRGFPPEAINNFCARVG 540
Query: 1635 VTVAQTTMEPHLLEACVRDVLNDTAPRAMAVLDSLQVVITNFPAAKLLDIQVPNFPADET 1814
VTVAQTTMEPHLLEACVRDVLNDTAPRAMAVL+ LQVVITNFPA K LDIQVPNFPADET
Sbjct: 541 VTVAQTTMEPHLLEACVRDVLNDTAPRAMAVLEPLQVVITNFPATKALDIQVPNFPADET 600
Query: 1815 KGFHQVPFGPTVFIERTDFKEEPEPGYKRLAWGQPVGLRHTGYVIELQHVVKGPNGCVES 1994
KGFHQVPFG TVFIER DFKEEPEPGYKRLAWGQPVGLRHTGYVIELQHVVKGP+GCVES
Sbjct: 601 KGFHQVPFGSTVFIERMDFKEEPEPGYKRLAWGQPVGLRHTGYVIELQHVVKGPSGCVES 660
Query: 1995 LEVTCRRADVGGKPKAFIHWVSQPLTCEIRLYDRLFQHKNPEDPAEVPGGFL 2150
L+VTCRRAD G KPKAFIHWVSQPLTCEIRLY+RLFQHKNPEDPAEVPGGFL
Sbjct: 661 LKVTCRRADAGEKPKAFIHWVSQPLTCEIRLYERLFQHKNPEDPAEVPGGFL 712
>ref|NP_001230249.1| glutamyl-prolyl-tRNA synthetase [Bos taurus].
Length = 1511
Score = 240 bits (613), Expect = 3e-63
Identities = 152/427 (35%), Positives = 218/427 (51%), Gaps = 5/427 (1%)
Frame = +3
Query: 798 GQIRTRFPPEPNGILHIGHAKAINFNFGYAKANNGICFLRFDDTNPEKEEAKFFTAICDM 977
G++ RFPPE +G LHIGHAKA N Y G +RFDDTNPEKE+ F I +
Sbjct: 196 GKVTVRFPPEASGYLHIGHAKAALLNQHYQVNFKGKLIMRFDDTNPEKEKEDFEKVILED 255
Query: 978 VAWLGYTPYKVTYASDYFDQLYAWAVELIHRGLAYVCHQRGEELKGHNP--LPSPWRDRP 1151
VA L P + TY SD+F+ + +A +LI G AYV E++K + S R+
Sbjct: 256 VAMLHIKPDQFTYTSDHFETIMKYAEKLIQEGKAYVDDTPAEQMKAEREQRIESKHRENS 315
Query: 1152 IEESLLLFEAMRKGKFAEGEATLRMKLVMEDGK---MDPVAYRVKYTPHHRTGDTWCIYP 1322
+E++L ++E M+KG LR K+ M K DP YR K H RTG+ + +YP
Sbjct: 316 VEKNLQMWEEMKKGSQFGQSCCLRAKIDMSSNKGCMRDPTLYRCKIKAHPRTGNKYNVYP 375
Query: 1323 TYDYTHCLCDSIEHITHSLCTKEFQARRSSYFWLCNALDVYCPVQWEYGRLNLHYAVVSK 1502
TYD+ + DSIE +TH+L T E+ R ++W+ AL + P WEY RLNL+ V+SK
Sbjct: 376 TYDFACPIVDSIEGVTHALRTTEYHDRDEQFYWIIEALGIRKPFIWEYSRLNLNNTVLSK 435
Query: 1503 RKILQLVAAGAVRDWDDPRLFTLTALRRRGFPPEAINNFCARVGVTVAQTTMEPHLLEAC 1682
RK+ V G V WDDPR T+ + RRG E + F A G + + ME + A
Sbjct: 436 RKLTWFVNEGLVDGWDDPRFPTVRGVLRRGMTVEGLKQFIAAQGSSRSVVNMEWDKIWAF 495
Query: 1683 VRDVLNDTAPRAMAVLDSLQVVITNFPAAKLLDIQVPNFPADETKGFHQVPFGPTVFIER 1862
+ V++ APR +A+L +VV N P A+ +V P + G V + VFIE
Sbjct: 496 NKKVIDPVAPRYVALLKK-EVVPVNIPEAQEEMKEVAKHPKNPDVGLKPVWYSSKVFIEG 554
Query: 1863 TDFKEEPEPGYKRLAWGQPVGLRHTGYVIELQHVVKGPNGCVESLEVTCRRADVGGKPKA 2042
D + L+ G+ V + G I + + K G + SL+ + K
Sbjct: 555 AD--------AETLSEGEMVTFINWGN-INITKIHKSAEGKIVSLDAKLNLENKDYKKTT 605
Query: 2043 FIHWVSQ 2063
I W+++
Sbjct: 606 KITWLAE 612
>ref|XP_002698070.1| PREDICTED: glutamyl-tRNA synthetase 2-like [Bos taurus].
Length = 523
Score = 56.6 bits (135), Expect = 9e-08
Identities = 65/232 (28%), Positives = 94/232 (40%), Gaps = 18/232 (7%)
Frame = +3
Query: 795 GGQIRTRFPPEPNGILHIGHAKAINFNFGYAKANNGICFLRFDDTNPEKEEAKFFTAICD 974
G +R RF P P G LH+G + +N+ +AK + G LR +DT+ + I D
Sbjct: 34 GAAVRVRFAPSPTGFLHLGGLRTALYNYIFAKKHQGSFILRLEDTDQTRLVPGAAENIED 93
Query: 975 MVAWLGY----TPYKVTYASDYFDQ----LYAWAVE-LIHRGLAYVCH---QRGEELKGH 1118
M+ W G +P + A Y LYA A E L+ G AY C QR E LK
Sbjct: 94 MLEWAGVPPDESPRRGGPAGPYLQSQRLALYAQAAEALLKSGAAYPCFCSPQRLELLK-K 152
Query: 1119 NPLPSPWRDRPIEESLLLFEAMRKGKFA-EGEATLRMKLVMEDGKMDPVAYR-VKYTPHH 1292
L + R L +A K A + + +R +L E + Y ++
Sbjct: 153 EALRNRQTPRYDNRCRSLSQAQVAQKLATDPKPAIRFRLEGEAPAFQDLVYGWNRHEVAS 212
Query: 1293 RTGDTWCI----YPTYDYTHCLCDSIEHITHSLCTKEFQARRSSYFWLCNAL 1436
GD + +PTY + D I+H L E+ S + L AL
Sbjct: 213 VEGDPVILKSDGFPTYHLASVVDDHHMGISHVLRGSEWLVSTSKHLLLYQAL 264
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 94,771,441
Number of extensions: 2888342
Number of successful extensions: 9871
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 9834
Number of HSP's successfully gapped: 3
Length of query: 730
Length of database: 17,681,374
Length adjustment: 110
Effective length of query: 620
Effective length of database: 14,041,694
Effective search space: 8705850280
Effective search space used: 8705850280
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002089
(2192 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_533833.2| PREDICTED: similar to glutaminyl-tRNA synthetas... 1389 0.0
Alignment gi|XP_862570.1| PREDICTED: similar to glutaminyl-tRNA synthetas... 1382 0.0
Alignment gi|XP_862520.1| PREDICTED: similar to glutaminyl-tRNA synthetas... 1352 0.0
Alignment gi|XP_862441.1| PREDICTED: similar to glutaminyl-tRNA synthetas... 1351 0.0
Alignment gi|XP_862415.1| PREDICTED: similar to glutaminyl-tRNA synthetas... 1351 0.0
Alignment gi|XP_862543.1| PREDICTED: similar to glutaminyl-tRNA synthetas... 1350 0.0
Alignment gi|XP_862494.1| PREDICTED: similar to glutaminyl-tRNA synthetas... 1303 0.0
Alignment gi|XP_862468.1| PREDICTED: similar to glutaminyl-tRNA synthetas... 600 e-171
Alignment gi|XP_858992.1| PREDICTED: similar to glutamyl-prolyl tRNA synt... 244 2e-64
Alignment gi|XP_536120.2| PREDICTED: similar to glutamyl-prolyl tRNA synt... 244 2e-64
>ref|XP_533833.2| PREDICTED: similar to glutaminyl-tRNA synthetase isoform 1 [Canis
familiaris].
Length = 775
Score = 1389 bits (3594), Expect = 0.0
Identities = 671/712 (94%), Positives = 689/712 (96%)
Frame = +3
Query: 15 MAALDSLSLFTGLGLSEHKARETLKNTALSAQLREAATQAQQTLGSTIDKATGTLLYGLA 194
MAALDSLSLFTGLGLSEHKARETLKNTALSAQLREAATQAQQTLGSTIDKATGTLLYGLA
Sbjct: 1 MAALDSLSLFTGLGLSEHKARETLKNTALSAQLREAATQAQQTLGSTIDKATGTLLYGLA 60
Query: 195 SRLRDPRRLSFLVSYIASRKIHTETQLSAALEYVRSHPLDPINTMDFEQECGVGVIVTPE 374
SRLRDPRRLSFLVSYIA++KIHTE QLSAALEYVRSHPLDPINT DFEQECGVGV+VTPE
Sbjct: 61 SRLRDPRRLSFLVSYIANKKIHTELQLSAALEYVRSHPLDPINTEDFEQECGVGVMVTPE 120
Query: 375 QIEEAVEAAINHHRSKLLVERYHFNMGLLMGEARAALKWADGKMIKHEVDMQVLHLLGPK 554
QIEEAVEAAIN HR +LL ERY FNMGLLMGEARA LKWADGKMIKHEVDMQVLHLLGPK
Sbjct: 121 QIEEAVEAAINRHRPQLLEERYRFNMGLLMGEARAVLKWADGKMIKHEVDMQVLHLLGPK 180
Query: 555 TESDLEKKPKVAKARLEEKDRVTAKDVVENGEAVVQTLSLMEQLRGEALKFHKPGENYKT 734
TE+DLEKKPKV+KAR EEKD+ TAK ++ENGEA QTLSL+EQLRGEALKFHKPGENYKT
Sbjct: 181 TETDLEKKPKVSKARPEEKDQRTAKVLMENGEAADQTLSLIEQLRGEALKFHKPGENYKT 240
Query: 735 PGYVTTPHTMDLLKQHLEITGGQIRTRFPPEPNGILHIGHAKAINFNFGYAKANNGICFL 914
PGYVTTPHTMDLLKQHLEITGGQ+RTRFPPEPNGILHIGHAKAINFNFGYAKANNGICFL
Sbjct: 241 PGYVTTPHTMDLLKQHLEITGGQVRTRFPPEPNGILHIGHAKAINFNFGYAKANNGICFL 300
Query: 915 RFDDTNPEKEEAKFFTAICDMVAWLGYTPYKVTYASDYFDQLYAWAVELIHRGLAYVCHQ 1094
RFDDTNPEKEEAKFFTAICDMV WLGYTPYKVTYASDYFDQLYAWAVELIHRG AYVCHQ
Sbjct: 301 RFDDTNPEKEEAKFFTAICDMVTWLGYTPYKVTYASDYFDQLYAWAVELIHRGQAYVCHQ 360
Query: 1095 RGEELKGHNPLPSPWRDRPIEESLLLFEAMRKGKFAEGEATLRMKLVMEDGKMDPVAYRV 1274
RGEELKGHN LPSPWRDRPIEESLLLFEAMRKGKFAEGEATLRMKLVMEDGKMDPVAYRV
Sbjct: 361 RGEELKGHNSLPSPWRDRPIEESLLLFEAMRKGKFAEGEATLRMKLVMEDGKMDPVAYRV 420
Query: 1275 KYTPHHRTGDTWCIYPTYDYTHCLCDSIEHITHSLCTKEFQARRSSYFWLCNALDVYCPV 1454
KYTPHHRTGDTWCIYPTYDYTHCLCDSIEHITHSLCTKEFQARRSSYFWLCNALDVYCPV
Sbjct: 421 KYTPHHRTGDTWCIYPTYDYTHCLCDSIEHITHSLCTKEFQARRSSYFWLCNALDVYCPV 480
Query: 1455 QWEYGRLNLHYAVVSKRKILQLVAAGAVRDWDDPRLFTLTALRRRGFPPEAINNFCARVG 1634
QWEYGRLNLHYAVVSKRKILQLVAAGAVRDWDDPRLFTLTALRRRGFPPEAINNFCARVG
Sbjct: 481 QWEYGRLNLHYAVVSKRKILQLVAAGAVRDWDDPRLFTLTALRRRGFPPEAINNFCARVG 540
Query: 1635 VTVAQTTMEPHLLEACVRDVLNDTAPRAMAVLDSLQVVITNFPAAKLLDIQVPNFPADET 1814
VTVAQTTMEPHLLEACVRDVLNDTAPRAMAVL+ LQV+ITNFP+ K LDIQVPNFPADET
Sbjct: 541 VTVAQTTMEPHLLEACVRDVLNDTAPRAMAVLEPLQVIITNFPSTKSLDIQVPNFPADET 600
Query: 1815 KGFHQVPFGPTVFIERTDFKEEPEPGYKRLAWGQPVGLRHTGYVIELQHVVKGPNGCVES 1994
KGFHQ+PFG +FIERTDFKEEPEPGYKRLAWGQPVGLRHTGYVIELQHVVKGP+GCVES
Sbjct: 601 KGFHQIPFGSMIFIERTDFKEEPEPGYKRLAWGQPVGLRHTGYVIELQHVVKGPSGCVES 660
Query: 1995 LEVTCRRADVGGKPKAFIHWVSQPLTCEIRLYDRLFQHKNPEDPAEVPGGFL 2150
LEVTCRRAD KPKAFIHWVSQPLTCEIRLY+RLFQHKNPEDPAEVPGGFL
Sbjct: 661 LEVTCRRADAAEKPKAFIHWVSQPLTCEIRLYERLFQHKNPEDPAEVPGGFL 712
>ref|XP_862570.1| PREDICTED: similar to glutaminyl-tRNA synthetase isoform 9 [Canis
familiaris].
Length = 774
Score = 1382 bits (3578), Expect = 0.0
Identities = 669/712 (93%), Positives = 689/712 (96%)
Frame = +3
Query: 15 MAALDSLSLFTGLGLSEHKARETLKNTALSAQLREAATQAQQTLGSTIDKATGTLLYGLA 194
MAALDSLSLFTGLGLSEHKARETLKNTALSAQLREAATQAQQTLGSTIDKATGTLLYGLA
Sbjct: 1 MAALDSLSLFTGLGLSEHKARETLKNTALSAQLREAATQAQQTLGSTIDKATGTLLYGLA 60
Query: 195 SRLRDPRRLSFLVSYIASRKIHTETQLSAALEYVRSHPLDPINTMDFEQECGVGVIVTPE 374
SRLRDPRRLSFLVSYIA++KIHTE QLSAALEYVRSHPLDPINT DFEQECGVGV+VTPE
Sbjct: 61 SRLRDPRRLSFLVSYIANKKIHTELQLSAALEYVRSHPLDPINTEDFEQECGVGVMVTPE 120
Query: 375 QIEEAVEAAINHHRSKLLVERYHFNMGLLMGEARAALKWADGKMIKHEVDMQVLHLLGPK 554
QIEEAVEAAIN HR +LL ERY FNMGLLMGEARA LKWADGKMIKHEVDMQVLHLLGPK
Sbjct: 121 QIEEAVEAAINRHRPQLLEERYRFNMGLLMGEARAVLKWADGKMIKHEVDMQVLHLLGPK 180
Query: 555 TESDLEKKPKVAKARLEEKDRVTAKDVVENGEAVVQTLSLMEQLRGEALKFHKPGENYKT 734
TE+DLEKKPKV+KAR EEKD+ TAK ++ENGE + +TLSL+EQLRGEALKFHKPGENYKT
Sbjct: 181 TETDLEKKPKVSKARPEEKDQRTAKVLMENGERL-ETLSLIEQLRGEALKFHKPGENYKT 239
Query: 735 PGYVTTPHTMDLLKQHLEITGGQIRTRFPPEPNGILHIGHAKAINFNFGYAKANNGICFL 914
PGYVTTPHTMDLLKQHLEITGGQ+RTRFPPEPNGILHIGHAKAINFNFGYAKANNGICFL
Sbjct: 240 PGYVTTPHTMDLLKQHLEITGGQVRTRFPPEPNGILHIGHAKAINFNFGYAKANNGICFL 299
Query: 915 RFDDTNPEKEEAKFFTAICDMVAWLGYTPYKVTYASDYFDQLYAWAVELIHRGLAYVCHQ 1094
RFDDTNPEKEEAKFFTAICDMV WLGYTPYKVTYASDYFDQLYAWAVELIHRG AYVCHQ
Sbjct: 300 RFDDTNPEKEEAKFFTAICDMVTWLGYTPYKVTYASDYFDQLYAWAVELIHRGQAYVCHQ 359
Query: 1095 RGEELKGHNPLPSPWRDRPIEESLLLFEAMRKGKFAEGEATLRMKLVMEDGKMDPVAYRV 1274
RGEELKGHN LPSPWRDRPIEESLLLFEAMRKGKFAEGEATLRMKLVMEDGKMDPVAYRV
Sbjct: 360 RGEELKGHNSLPSPWRDRPIEESLLLFEAMRKGKFAEGEATLRMKLVMEDGKMDPVAYRV 419
Query: 1275 KYTPHHRTGDTWCIYPTYDYTHCLCDSIEHITHSLCTKEFQARRSSYFWLCNALDVYCPV 1454
KYTPHHRTGDTWCIYPTYDYTHCLCDSIEHITHSLCTKEFQARRSSYFWLCNALDVYCPV
Sbjct: 420 KYTPHHRTGDTWCIYPTYDYTHCLCDSIEHITHSLCTKEFQARRSSYFWLCNALDVYCPV 479
Query: 1455 QWEYGRLNLHYAVVSKRKILQLVAAGAVRDWDDPRLFTLTALRRRGFPPEAINNFCARVG 1634
QWEYGRLNLHYAVVSKRKILQLVAAGAVRDWDDPRLFTLTALRRRGFPPEAINNFCARVG
Sbjct: 480 QWEYGRLNLHYAVVSKRKILQLVAAGAVRDWDDPRLFTLTALRRRGFPPEAINNFCARVG 539
Query: 1635 VTVAQTTMEPHLLEACVRDVLNDTAPRAMAVLDSLQVVITNFPAAKLLDIQVPNFPADET 1814
VTVAQTTMEPHLLEACVRDVLNDTAPRAMAVL+ LQV+ITNFP+ K LDIQVPNFPADET
Sbjct: 540 VTVAQTTMEPHLLEACVRDVLNDTAPRAMAVLEPLQVIITNFPSTKSLDIQVPNFPADET 599
Query: 1815 KGFHQVPFGPTVFIERTDFKEEPEPGYKRLAWGQPVGLRHTGYVIELQHVVKGPNGCVES 1994
KGFHQ+PFG +FIERTDFKEEPEPGYKRLAWGQPVGLRHTGYVIELQHVVKGP+GCVES
Sbjct: 600 KGFHQIPFGSMIFIERTDFKEEPEPGYKRLAWGQPVGLRHTGYVIELQHVVKGPSGCVES 659
Query: 1995 LEVTCRRADVGGKPKAFIHWVSQPLTCEIRLYDRLFQHKNPEDPAEVPGGFL 2150
LEVTCRRAD KPKAFIHWVSQPLTCEIRLY+RLFQHKNPEDPAEVPGGFL
Sbjct: 660 LEVTCRRADAAEKPKAFIHWVSQPLTCEIRLYERLFQHKNPEDPAEVPGGFL 711
>ref|XP_862520.1| PREDICTED: similar to glutaminyl-tRNA synthetase isoform 7 [Canis
familiaris].
Length = 764
Score = 1352 bits (3499), Expect = 0.0
Identities = 660/712 (92%), Positives = 678/712 (95%)
Frame = +3
Query: 15 MAALDSLSLFTGLGLSEHKARETLKNTALSAQLREAATQAQQTLGSTIDKATGTLLYGLA 194
MAALDSLSLFTGLGLSEHKARETLKNTALSAQLREAATQAQQTLGSTIDKATGTLLYGLA
Sbjct: 1 MAALDSLSLFTGLGLSEHKARETLKNTALSAQLREAATQAQQTLGSTIDKATGTLLYGLA 60
Query: 195 SRLRDPRRLSFLVSYIASRKIHTETQLSAALEYVRSHPLDPINTMDFEQECGVGVIVTPE 374
SRLRDPRRLSFLVSYIA++KIHTE QLSAALEYVRSHPLDPINT DFEQECGVGV+VTPE
Sbjct: 61 SRLRDPRRLSFLVSYIANKKIHTELQLSAALEYVRSHPLDPINTEDFEQECGVGVMVTPE 120
Query: 375 QIEEAVEAAINHHRSKLLVERYHFNMGLLMGEARAALKWADGKMIKHEVDMQVLHLLGPK 554
QIEEAVEAAIN HR +LL ERY FNMGLLMGEARA LKWADGKMIKHEVDMQVLHLLGPK
Sbjct: 121 QIEEAVEAAINRHRPQLLEERYRFNMGLLMGEARAVLKWADGKMIKHEVDMQVLHLLGPK 180
Query: 555 TESDLEKKPKVAKARLEEKDRVTAKDVVENGEAVVQTLSLMEQLRGEALKFHKPGENYKT 734
TE+DLEKKPKV+KAR EEKD+ TAK ++ENGEA QTLSL+EQLRGEALKFHKPGENYKT
Sbjct: 181 TETDLEKKPKVSKARPEEKDQRTAKVLMENGEAADQTLSLIEQLRGEALKFHKPGENYKT 240
Query: 735 PGYVTTPHTMDLLKQHLEITGGQIRTRFPPEPNGILHIGHAKAINFNFGYAKANNGICFL 914
PGYVTTPHTMDLLKQHLEITGGQ+RTRFPPEPNGILHIGHAKAINFNFGYAKANNGICFL
Sbjct: 241 PGYVTTPHTMDLLKQHLEITGGQVRTRFPPEPNGILHIGHAKAINFNFGYAKANNGICFL 300
Query: 915 RFDDTNPEKEEAKFFTAICDMVAWLGYTPYKVTYASDYFDQLYAWAVELIHRGLAYVCHQ 1094
RFDDTNPEKEEAKFFTAICDMV WLGYTPYKVTYASDYFDQLYAWAVELIHRG AYVCHQ
Sbjct: 301 RFDDTNPEKEEAKFFTAICDMVTWLGYTPYKVTYASDYFDQLYAWAVELIHRGQAYVCHQ 360
Query: 1095 RGEELKGHNPLPSPWRDRPIEESLLLFEAMRKGKFAEGEATLRMKLVMEDGKMDPVAYRV 1274
RGEELKGHN LPSPWRDRPIEESLLLFEAMRKGKFAEGEATLRMKLVMEDGKMDPVAYRV
Sbjct: 361 RGEELKGHNSLPSPWRDRPIEESLLLFEAMRKGKFAEGEATLRMKLVMEDGKMDPVAYRV 420
Query: 1275 KYTPHHRTGDTWCIYPTYDYTHCLCDSIEHITHSLCTKEFQARRSSYFWLCNALDVYCPV 1454
K CIYPTYDYTHCLCDSIEHITHSLCTKEFQARRSSYFWLCNALDVYCPV
Sbjct: 421 K-----------CIYPTYDYTHCLCDSIEHITHSLCTKEFQARRSSYFWLCNALDVYCPV 469
Query: 1455 QWEYGRLNLHYAVVSKRKILQLVAAGAVRDWDDPRLFTLTALRRRGFPPEAINNFCARVG 1634
QWEYGRLNLHYAVVSKRKILQLVAAGAVRDWDDPRLFTLTALRRRGFPPEAINNFCARVG
Sbjct: 470 QWEYGRLNLHYAVVSKRKILQLVAAGAVRDWDDPRLFTLTALRRRGFPPEAINNFCARVG 529
Query: 1635 VTVAQTTMEPHLLEACVRDVLNDTAPRAMAVLDSLQVVITNFPAAKLLDIQVPNFPADET 1814
VTVAQTTMEPHLLEACVRDVLNDTAPRAMAVL+ LQV+ITNFP+ K LDIQVPNFPADET
Sbjct: 530 VTVAQTTMEPHLLEACVRDVLNDTAPRAMAVLEPLQVIITNFPSTKSLDIQVPNFPADET 589
Query: 1815 KGFHQVPFGPTVFIERTDFKEEPEPGYKRLAWGQPVGLRHTGYVIELQHVVKGPNGCVES 1994
KGFHQ+PFG +FIERTDFKEEPEPGYKRLAWGQPVGLRHTGYVIELQHVVKGP+GCVES
Sbjct: 590 KGFHQIPFGSMIFIERTDFKEEPEPGYKRLAWGQPVGLRHTGYVIELQHVVKGPSGCVES 649
Query: 1995 LEVTCRRADVGGKPKAFIHWVSQPLTCEIRLYDRLFQHKNPEDPAEVPGGFL 2150
LEVTCRRAD KPKAFIHWVSQPLTCEIRLY+RLFQHKNPEDPAEVPGGFL
Sbjct: 650 LEVTCRRADAAEKPKAFIHWVSQPLTCEIRLYERLFQHKNPEDPAEVPGGFL 701
>ref|XP_862441.1| PREDICTED: similar to glutaminyl-tRNA synthetase isoform 4 [Canis
familiaris].
Length = 695
Score = 1351 bits (3497), Expect = 0.0
Identities = 654/695 (94%), Positives = 672/695 (96%)
Frame = +3
Query: 15 MAALDSLSLFTGLGLSEHKARETLKNTALSAQLREAATQAQQTLGSTIDKATGTLLYGLA 194
MAALDSLSLFTGLGLSEHKARETLKNTALSAQLREAATQAQQTLGSTIDKATGTLLYGLA
Sbjct: 1 MAALDSLSLFTGLGLSEHKARETLKNTALSAQLREAATQAQQTLGSTIDKATGTLLYGLA 60
Query: 195 SRLRDPRRLSFLVSYIASRKIHTETQLSAALEYVRSHPLDPINTMDFEQECGVGVIVTPE 374
SRLRDPRRLSFLVSYIA++KIHTE QLSAALEYVRSHPLDPINT DFEQECGVGV+VTPE
Sbjct: 61 SRLRDPRRLSFLVSYIANKKIHTELQLSAALEYVRSHPLDPINTEDFEQECGVGVMVTPE 120
Query: 375 QIEEAVEAAINHHRSKLLVERYHFNMGLLMGEARAALKWADGKMIKHEVDMQVLHLLGPK 554
QIEEAVEAAIN HR +LL ERY FNMGLLMGEARA LKWADGKMIKHEVDMQVLHLLGPK
Sbjct: 121 QIEEAVEAAINRHRPQLLEERYRFNMGLLMGEARAVLKWADGKMIKHEVDMQVLHLLGPK 180
Query: 555 TESDLEKKPKVAKARLEEKDRVTAKDVVENGEAVVQTLSLMEQLRGEALKFHKPGENYKT 734
TE+DLEKKPKV+KAR EEKD+ TAK ++ENGEA QTLSL+EQLRGEALKFHKPGENYKT
Sbjct: 181 TETDLEKKPKVSKARPEEKDQRTAKVLMENGEAADQTLSLIEQLRGEALKFHKPGENYKT 240
Query: 735 PGYVTTPHTMDLLKQHLEITGGQIRTRFPPEPNGILHIGHAKAINFNFGYAKANNGICFL 914
PGYVTTPHTMDLLKQHLEITGGQ+RTRFPPEPNGILHIGHAKAINFNFGYAKANNGICFL
Sbjct: 241 PGYVTTPHTMDLLKQHLEITGGQVRTRFPPEPNGILHIGHAKAINFNFGYAKANNGICFL 300
Query: 915 RFDDTNPEKEEAKFFTAICDMVAWLGYTPYKVTYASDYFDQLYAWAVELIHRGLAYVCHQ 1094
RFDDTNPEKEEAKFFTAICDMV WLGYTPYKVTYASDYFDQLYAWAVELIHRG AYVCHQ
Sbjct: 301 RFDDTNPEKEEAKFFTAICDMVTWLGYTPYKVTYASDYFDQLYAWAVELIHRGQAYVCHQ 360
Query: 1095 RGEELKGHNPLPSPWRDRPIEESLLLFEAMRKGKFAEGEATLRMKLVMEDGKMDPVAYRV 1274
RGEELKGHN LPSPWRDRPIEESLLLFEAMRKGKFAEGEATLRMKLVMEDGKMDPVAYRV
Sbjct: 361 RGEELKGHNSLPSPWRDRPIEESLLLFEAMRKGKFAEGEATLRMKLVMEDGKMDPVAYRV 420
Query: 1275 KYTPHHRTGDTWCIYPTYDYTHCLCDSIEHITHSLCTKEFQARRSSYFWLCNALDVYCPV 1454
KYTPHHRTGDTWCIYPTYDYTHCLCDSIEHITHSLCTKEFQARRSSYFWLCNALDVYCPV
Sbjct: 421 KYTPHHRTGDTWCIYPTYDYTHCLCDSIEHITHSLCTKEFQARRSSYFWLCNALDVYCPV 480
Query: 1455 QWEYGRLNLHYAVVSKRKILQLVAAGAVRDWDDPRLFTLTALRRRGFPPEAINNFCARVG 1634
QWEYGRLNLHYAVVSKRKILQLVAAGAVRDWDDPRLFTLTALRRRGFPPEAINNFCARVG
Sbjct: 481 QWEYGRLNLHYAVVSKRKILQLVAAGAVRDWDDPRLFTLTALRRRGFPPEAINNFCARVG 540
Query: 1635 VTVAQTTMEPHLLEACVRDVLNDTAPRAMAVLDSLQVVITNFPAAKLLDIQVPNFPADET 1814
VTVAQTTMEPHLLEACVRDVLNDTAPRAMAVL+ LQV+ITNFP+ K LDIQVPNFPADET
Sbjct: 541 VTVAQTTMEPHLLEACVRDVLNDTAPRAMAVLEPLQVIITNFPSTKSLDIQVPNFPADET 600
Query: 1815 KGFHQVPFGPTVFIERTDFKEEPEPGYKRLAWGQPVGLRHTGYVIELQHVVKGPNGCVES 1994
KGFHQ+PFG +FIERTDFKEEPEPGYKRLAWGQPVGLRHTGYVIELQHVVKGP+GCVES
Sbjct: 601 KGFHQIPFGSMIFIERTDFKEEPEPGYKRLAWGQPVGLRHTGYVIELQHVVKGPSGCVES 660
Query: 1995 LEVTCRRADVGGKPKAFIHWVSQPLTCEIRLYDRL 2099
LEVTCRRAD KPKAFIHWVSQPLTCEIRLY+RL
Sbjct: 661 LEVTCRRADAAEKPKAFIHWVSQPLTCEIRLYERL 695
>ref|XP_862415.1| PREDICTED: similar to glutaminyl-tRNA synthetase isoform 3 [Canis
familiaris].
Length = 695
Score = 1351 bits (3497), Expect = 0.0
Identities = 654/695 (94%), Positives = 672/695 (96%)
Frame = +3
Query: 15 MAALDSLSLFTGLGLSEHKARETLKNTALSAQLREAATQAQQTLGSTIDKATGTLLYGLA 194
MAALDSLSLFTGLGLSEHKARETLKNTALSAQLREAATQAQQTLGSTIDKATGTLLYGLA
Sbjct: 1 MAALDSLSLFTGLGLSEHKARETLKNTALSAQLREAATQAQQTLGSTIDKATGTLLYGLA 60
Query: 195 SRLRDPRRLSFLVSYIASRKIHTETQLSAALEYVRSHPLDPINTMDFEQECGVGVIVTPE 374
SRLRDPRRLSFLVSYIA++KIHTE QLSAALEYVRSHPLDPINT DFEQECGVGV+VTPE
Sbjct: 61 SRLRDPRRLSFLVSYIANKKIHTELQLSAALEYVRSHPLDPINTEDFEQECGVGVMVTPE 120
Query: 375 QIEEAVEAAINHHRSKLLVERYHFNMGLLMGEARAALKWADGKMIKHEVDMQVLHLLGPK 554
QIEEAVEAAIN HR +LL ERY FNMGLLMGEARA LKWADGKMIKHEVDMQVLHLLGPK
Sbjct: 121 QIEEAVEAAINRHRPQLLEERYRFNMGLLMGEARAVLKWADGKMIKHEVDMQVLHLLGPK 180
Query: 555 TESDLEKKPKVAKARLEEKDRVTAKDVVENGEAVVQTLSLMEQLRGEALKFHKPGENYKT 734
TE+DLEKKPKV+KAR EEKD+ TAK ++ENGEA QTLSL+EQLRGEALKFHKPGENYKT
Sbjct: 181 TETDLEKKPKVSKARPEEKDQRTAKVLMENGEAADQTLSLIEQLRGEALKFHKPGENYKT 240
Query: 735 PGYVTTPHTMDLLKQHLEITGGQIRTRFPPEPNGILHIGHAKAINFNFGYAKANNGICFL 914
PGYVTTPHTMDLLKQHLEITGGQ+RTRFPPEPNGILHIGHAKAINFNFGYAKANNGICFL
Sbjct: 241 PGYVTTPHTMDLLKQHLEITGGQVRTRFPPEPNGILHIGHAKAINFNFGYAKANNGICFL 300
Query: 915 RFDDTNPEKEEAKFFTAICDMVAWLGYTPYKVTYASDYFDQLYAWAVELIHRGLAYVCHQ 1094
RFDDTNPEKEEAKFFTAICDMV WLGYTPYKVTYASDYFDQLYAWAVELIHRG AYVCHQ
Sbjct: 301 RFDDTNPEKEEAKFFTAICDMVTWLGYTPYKVTYASDYFDQLYAWAVELIHRGQAYVCHQ 360
Query: 1095 RGEELKGHNPLPSPWRDRPIEESLLLFEAMRKGKFAEGEATLRMKLVMEDGKMDPVAYRV 1274
RGEELKGHN LPSPWRDRPIEESLLLFEAMRKGKFAEGEATLRMKLVMEDGKMDPVAYRV
Sbjct: 361 RGEELKGHNSLPSPWRDRPIEESLLLFEAMRKGKFAEGEATLRMKLVMEDGKMDPVAYRV 420
Query: 1275 KYTPHHRTGDTWCIYPTYDYTHCLCDSIEHITHSLCTKEFQARRSSYFWLCNALDVYCPV 1454
KYTPHHRTGDTWCIYPTYDYTHCLCDSIEHITHSLCTKEFQARRSSYFWLCNALDVYCPV
Sbjct: 421 KYTPHHRTGDTWCIYPTYDYTHCLCDSIEHITHSLCTKEFQARRSSYFWLCNALDVYCPV 480
Query: 1455 QWEYGRLNLHYAVVSKRKILQLVAAGAVRDWDDPRLFTLTALRRRGFPPEAINNFCARVG 1634
QWEYGRLNLHYAVVSKRKILQLVAAGAVRDWDDPRLFTLTALRRRGFPPEAINNFCARVG
Sbjct: 481 QWEYGRLNLHYAVVSKRKILQLVAAGAVRDWDDPRLFTLTALRRRGFPPEAINNFCARVG 540
Query: 1635 VTVAQTTMEPHLLEACVRDVLNDTAPRAMAVLDSLQVVITNFPAAKLLDIQVPNFPADET 1814
VTVAQTTMEPHLLEACVRDVLNDTAPRAMAVL+ LQV+ITNFP+ K LDIQVPNFPADET
Sbjct: 541 VTVAQTTMEPHLLEACVRDVLNDTAPRAMAVLEPLQVIITNFPSTKSLDIQVPNFPADET 600
Query: 1815 KGFHQVPFGPTVFIERTDFKEEPEPGYKRLAWGQPVGLRHTGYVIELQHVVKGPNGCVES 1994
KGFHQ+PFG +FIERTDFKEEPEPGYKRLAWGQPVGLRHTGYVIELQHVVKGP+GCVES
Sbjct: 601 KGFHQIPFGSMIFIERTDFKEEPEPGYKRLAWGQPVGLRHTGYVIELQHVVKGPSGCVES 660
Query: 1995 LEVTCRRADVGGKPKAFIHWVSQPLTCEIRLYDRL 2099
LEVTCRRAD KPKAFIHWVSQPLTCEIRLY+RL
Sbjct: 661 LEVTCRRADAAEKPKAFIHWVSQPLTCEIRLYERL 695
>ref|XP_862543.1| PREDICTED: similar to glutaminyl-tRNA synthetase isoform 8 [Canis
familiaris].
Length = 760
Score = 1350 bits (3493), Expect = 0.0
Identities = 657/712 (92%), Positives = 675/712 (94%)
Frame = +3
Query: 15 MAALDSLSLFTGLGLSEHKARETLKNTALSAQLREAATQAQQTLGSTIDKATGTLLYGLA 194
MAALDSLSLFTGLGLSEHKARETLKNTALSAQLREAATQAQQTLGSTIDKATGTLLYGLA
Sbjct: 1 MAALDSLSLFTGLGLSEHKARETLKNTALSAQLREAATQAQQTLGSTIDKATGTLLYGLA 60
Query: 195 SRLRDPRRLSFLVSYIASRKIHTETQLSAALEYVRSHPLDPINTMDFEQECGVGVIVTPE 374
SRLRDPRRLSFLVSYIA++KIHTE QLSAALEYVRSHPLDPINT DFEQECGVGV+VTPE
Sbjct: 61 SRLRDPRRLSFLVSYIANKKIHTELQLSAALEYVRSHPLDPINTEDFEQECGVGVMVTPE 120
Query: 375 QIEEAVEAAINHHRSKLLVERYHFNMGLLMGEARAALKWADGKMIKHEVDMQVLHLLGPK 554
QIEEAVEAAIN HR +LL ERY FNMGLLMGEARA LKWADGKMIKHEVDMQVLHLLGPK
Sbjct: 121 QIEEAVEAAINRHRPQLLEERYRFNMGLLMGEARAVLKWADGKMIKHEVDMQVLHLLGPK 180
Query: 555 TESDLEKKPKVAKARLEEKDRVTAKDVVENGEAVVQTLSLMEQLRGEALKFHKPGENYKT 734
TE+DLEKKPKV+KAR EEKD+ TAK ++ENGEA QTLSL+EQLRGEALKFHKPGENYKT
Sbjct: 181 TETDLEKKPKVSKARPEEKDQRTAKVLMENGEAADQTLSLIEQLRGEALKFHKPGENYKT 240
Query: 735 PGYVTTPHTMDLLKQHLEITGGQIRTRFPPEPNGILHIGHAKAINFNFGYAKANNGICFL 914
PGYVTTPHTMDLLKQHLEITGGQ+RTRFPPEPNGILHIGHAKAINFNFGYAKANNGICFL
Sbjct: 241 PGYVTTPHTMDLLKQHLEITGGQVRTRFPPEPNGILHIGHAKAINFNFGYAKANNGICFL 300
Query: 915 RFDDTNPEKEEAKFFTAICDMVAWLGYTPYKVTYASDYFDQLYAWAVELIHRGLAYVCHQ 1094
RFDDTNPEKEEAKFFTAICDMV WLGYTPYKVTYASDYFDQLYAW
Sbjct: 301 RFDDTNPEKEEAKFFTAICDMVTWLGYTPYKVTYASDYFDQLYAW--------------- 345
Query: 1095 RGEELKGHNPLPSPWRDRPIEESLLLFEAMRKGKFAEGEATLRMKLVMEDGKMDPVAYRV 1274
RGEELKGHN LPSPWRDRPIEESLLLFEAMRKGKFAEGEATLRMKLVMEDGKMDPVAYRV
Sbjct: 346 RGEELKGHNSLPSPWRDRPIEESLLLFEAMRKGKFAEGEATLRMKLVMEDGKMDPVAYRV 405
Query: 1275 KYTPHHRTGDTWCIYPTYDYTHCLCDSIEHITHSLCTKEFQARRSSYFWLCNALDVYCPV 1454
KYTPHHRTGDTWCIYPTYDYTHCLCDSIEHITHSLCTKEFQARRSSYFWLCNALDVYCPV
Sbjct: 406 KYTPHHRTGDTWCIYPTYDYTHCLCDSIEHITHSLCTKEFQARRSSYFWLCNALDVYCPV 465
Query: 1455 QWEYGRLNLHYAVVSKRKILQLVAAGAVRDWDDPRLFTLTALRRRGFPPEAINNFCARVG 1634
QWEYGRLNLHYAVVSKRKILQLVAAGAVRDWDDPRLFTLTALRRRGFPPEAINNFCARVG
Sbjct: 466 QWEYGRLNLHYAVVSKRKILQLVAAGAVRDWDDPRLFTLTALRRRGFPPEAINNFCARVG 525
Query: 1635 VTVAQTTMEPHLLEACVRDVLNDTAPRAMAVLDSLQVVITNFPAAKLLDIQVPNFPADET 1814
VTVAQTTMEPHLLEACVRDVLNDTAPRAMAVL+ LQV+ITNFP+ K LDIQVPNFPADET
Sbjct: 526 VTVAQTTMEPHLLEACVRDVLNDTAPRAMAVLEPLQVIITNFPSTKSLDIQVPNFPADET 585
Query: 1815 KGFHQVPFGPTVFIERTDFKEEPEPGYKRLAWGQPVGLRHTGYVIELQHVVKGPNGCVES 1994
KGFHQ+PFG +FIERTDFKEEPEPGYKRLAWGQPVGLRHTGYVIELQHVVKGP+GCVES
Sbjct: 586 KGFHQIPFGSMIFIERTDFKEEPEPGYKRLAWGQPVGLRHTGYVIELQHVVKGPSGCVES 645
Query: 1995 LEVTCRRADVGGKPKAFIHWVSQPLTCEIRLYDRLFQHKNPEDPAEVPGGFL 2150
LEVTCRRAD KPKAFIHWVSQPLTCEIRLY+RLFQHKNPEDPAEVPGGFL
Sbjct: 646 LEVTCRRADAAEKPKAFIHWVSQPLTCEIRLYERLFQHKNPEDPAEVPGGFL 697
>ref|XP_862494.1| PREDICTED: similar to glutaminyl-tRNA synthetase isoform 6 [Canis
familiaris].
Length = 746
Score = 1303 bits (3372), Expect = 0.0
Identities = 640/712 (89%), Positives = 659/712 (92%)
Frame = +3
Query: 15 MAALDSLSLFTGLGLSEHKARETLKNTALSAQLREAATQAQQTLGSTIDKATGTLLYGLA 194
MAALDSLSLFTGLGLSEHKARETLKNTALSAQLREAATQAQQTLGSTIDKATGTLLYGLA
Sbjct: 1 MAALDSLSLFTGLGLSEHKARETLKNTALSAQLREAATQAQQTLGSTIDKATGTLLYGLA 60
Query: 195 SRLRDPRRLSFLVSYIASRKIHTETQLSAALEYVRSHPLDPINTMDFEQECGVGVIVTPE 374
SRLRDPRRLSFLVSYIA++KIHTE QLSAALEYVRSHPLDPINT DFEQECGVGV+VTPE
Sbjct: 61 SRLRDPRRLSFLVSYIANKKIHTELQLSAALEYVRSHPLDPINTEDFEQECGVGVMVTPE 120
Query: 375 QIEEAVEAAINHHRSKLLVERYHFNMGLLMGEARAALKWADGKMIKHEVDMQVLHLLGPK 554
QIEEAVEAAIN HR +LL ERY FNMGLLMGEARA LKWADGKMIKHEVDMQVLHLLGPK
Sbjct: 121 QIEEAVEAAINRHRPQLLEERYRFNMGLLMGEARAVLKWADGKMIKHEVDMQVLHLLGPK 180
Query: 555 TESDLEKKPKVAKARLEEKDRVTAKDVVENGEAVVQTLSLMEQLRGEALKFHKPGENYKT 734
TE+DLEKKPKV+KAR EEKD+ TAK ++ENGEA QTLSL+EQLRGEALKFHKPGENYKT
Sbjct: 181 TETDLEKKPKVSKARPEEKDQRTAKVLMENGEAADQTLSLIEQLRGEALKFHKPGENYKT 240
Query: 735 PGYVTTPHTMDLLKQHLEITGGQIRTRFPPEPNGILHIGHAKAINFNFGYAKANNGICFL 914
PGYVTTPHTMDLLKQHLEITGGQ+RTRFPPEPNGILHIGHAKAINFNFGYAKANNGICFL
Sbjct: 241 PGYVTTPHTMDLLKQHLEITGGQVRTRFPPEPNGILHIGHAKAINFNFGYAKANNGICFL 300
Query: 915 RFDDTNPEKEEAKFFTAICDMVAWLGYTPYKVTYASDYFDQLYAWAVELIHRGLAYVCHQ 1094
RFDDTNPEKEEAKFFTAICDMV WLGYTPYKVTYASDYFDQLYAWAVELIHRG AYVCHQ
Sbjct: 301 RFDDTNPEKEEAKFFTAICDMVTWLGYTPYKVTYASDYFDQLYAWAVELIHRGQAYVCHQ 360
Query: 1095 RGEELKGHNPLPSPWRDRPIEESLLLFEAMRKGKFAEGEATLRMKLVMEDGKMDPVAYRV 1274
RGEELKGHN LPSPWRDRPIEESLLLFEAMRKGKFAEGEATLRMKLVMEDGKMDPVAYRV
Sbjct: 361 RGEELKGHNSLPSPWRDRPIEESLLLFEAMRKGKFAEGEATLRMKLVMEDGKMDPVAYRV 420
Query: 1275 KYTPHHRTGDTWCIYPTYDYTHCLCDSIEHITHSLCTKEFQARRSSYFWLCNALDVYCPV 1454
KYTPHHRTGDTW + RSSYFWLCNALDVYCPV
Sbjct: 421 KYTPHHRTGDTWWV-----------------------------RSSYFWLCNALDVYCPV 451
Query: 1455 QWEYGRLNLHYAVVSKRKILQLVAAGAVRDWDDPRLFTLTALRRRGFPPEAINNFCARVG 1634
QWEYGRLNLHYAVVSKRKILQLVAAGAVRDWDDPRLFTLTALRRRGFPPEAINNFCARVG
Sbjct: 452 QWEYGRLNLHYAVVSKRKILQLVAAGAVRDWDDPRLFTLTALRRRGFPPEAINNFCARVG 511
Query: 1635 VTVAQTTMEPHLLEACVRDVLNDTAPRAMAVLDSLQVVITNFPAAKLLDIQVPNFPADET 1814
VTVAQTTMEPHLLEACVRDVLNDTAPRAMAVL+ LQV+ITNFP+ K LDIQVPNFPADET
Sbjct: 512 VTVAQTTMEPHLLEACVRDVLNDTAPRAMAVLEPLQVIITNFPSTKSLDIQVPNFPADET 571
Query: 1815 KGFHQVPFGPTVFIERTDFKEEPEPGYKRLAWGQPVGLRHTGYVIELQHVVKGPNGCVES 1994
KGFHQ+PFG +FIERTDFKEEPEPGYKRLAWGQPVGLRHTGYVIELQHVVKGP+GCVES
Sbjct: 572 KGFHQIPFGSMIFIERTDFKEEPEPGYKRLAWGQPVGLRHTGYVIELQHVVKGPSGCVES 631
Query: 1995 LEVTCRRADVGGKPKAFIHWVSQPLTCEIRLYDRLFQHKNPEDPAEVPGGFL 2150
LEVTCRRAD KPKAFIHWVSQPLTCEIRLY+RLFQHKNPEDPAEVPGGFL
Sbjct: 632 LEVTCRRADAAEKPKAFIHWVSQPLTCEIRLYERLFQHKNPEDPAEVPGGFL 683
>ref|XP_862468.1| PREDICTED: similar to glutaminyl-tRNA synthetase isoform 5 [Canis
familiaris].
Length = 375
Score = 600 bits (1546), Expect = e-171
Identities = 308/372 (82%), Positives = 325/372 (87%)
Frame = +3
Query: 15 MAALDSLSLFTGLGLSEHKARETLKNTALSAQLREAATQAQQTLGSTIDKATGTLLYGLA 194
MAALDSLSLFTGLGLSEHKARETLKNTALSAQLREAATQAQQTLGSTIDKATGTLLYGLA
Sbjct: 1 MAALDSLSLFTGLGLSEHKARETLKNTALSAQLREAATQAQQTLGSTIDKATGTLLYGLA 60
Query: 195 SRLRDPRRLSFLVSYIASRKIHTETQLSAALEYVRSHPLDPINTMDFEQECGVGVIVTPE 374
SRLRDPRRLSFLVSYIA++KIHTE QLSAALEYVRSHPLDPINT DFEQECGVGV+VTPE
Sbjct: 61 SRLRDPRRLSFLVSYIANKKIHTELQLSAALEYVRSHPLDPINTEDFEQECGVGVMVTPE 120
Query: 375 QIEEAVEAAINHHRSKLLVERYHFNMGLLMGEARAALKWADGKMIKHEVDMQVLHLLGPK 554
QIEEAVEAAIN HR +LL ERY FNMGLLMGEARA LKWADGKMIKHEVDMQVLHLLGPK
Sbjct: 121 QIEEAVEAAINRHRPQLLEERYRFNMGLLMGEARAVLKWADGKMIKHEVDMQVLHLLGPK 180
Query: 555 TESDLEKKPKVAKARLEEKDRVTAKDVVENGEAVVQTLSLMEQLRGEALKFHKPGENYKT 734
TE+DLEKKPKV+KAR EEKD+ TAK ++ENGEA QTLSL+EQLRGEALKFHKPGENYKT
Sbjct: 181 TETDLEKKPKVSKARPEEKDQRTAKVLMENGEAADQTLSLIEQLRGEALKFHKPGENYKT 240
Query: 735 PGYVTTPHTMDLLKQHLEITGGQIRTRFPPEPNGILHIGHAKAINFNFGYAKANNGICFL 914
PGYVTTPHTMDLLKQHLEITGGQ+RTRFPPEPNGILHIGHAKAINFNFGYAKANNGICFL
Sbjct: 241 PGYVTTPHTMDLLKQHLEITGGQVRTRFPPEPNGILHIGHAKAINFNFGYAKANNGICFL 300
Query: 915 RFDDTNPEKEEAKFFTAICDMVAWLGYTPYKVTYASDYFDQLYAWAVELIHRGLAYVCHQ 1094
RFDDTNPEKEEAKFFTAICDMV L +T + L W+ + R + +
Sbjct: 301 RFDDTNPEKEEAKFFTAICDMVTLLTRLHMPLTILTSCMPGL--WSSSIGARPMCATSEE 358
Query: 1095 RGEELKGHNPLP 1130
R H P P
Sbjct: 359 RNSRGITHCPHP 370
Score = 87.0 bits (214), Expect = 7e-17
Identities = 43/53 (81%), Positives = 44/53 (83%)
Frame = +1
Query: 991 VTHLTR*HMPLTILTSYMPGL*SLSTGAWPMCATSEERNSKATTHCPHPGETV 1149
VT LTR HMPLTILTS MPGL S S GA PMCATSEERNS+ THCPHPGETV
Sbjct: 322 VTLLTRLHMPLTILTSCMPGLWSSSIGARPMCATSEERNSRGITHCPHPGETV 374
>ref|XP_858992.1| PREDICTED: similar to glutamyl-prolyl tRNA synthetase isoform 5
[Canis familiaris].
Length = 1508
Score = 244 bits (624), Expect = 2e-64
Identities = 156/446 (34%), Positives = 227/446 (50%), Gaps = 8/446 (1%)
Frame = +3
Query: 750 TPHTMDLLKQHLEITG---GQIRTRFPPEPNGILHIGHAKAINFNFGYAKANNGICFLRF 920
TP + + +E+ G G++ RFPPE +G LHIGHAKA N Y G +RF
Sbjct: 177 TPEKKQDVGKFVELPGAEMGKVTVRFPPEASGYLHIGHAKAALLNQHYQVNFKGKLIMRF 236
Query: 921 DDTNPEKEEAKFFTAICDMVAWLGYTPYKVTYASDYFDQLYAWAVELIHRGLAYVCHQRG 1100
DDTNPEKE+ F I + VA L P + TY SD+F+ + +A +LI G AYV
Sbjct: 237 DDTNPEKEKEDFEKVILEDVAMLHIKPDQFTYTSDHFETIMKYAEKLIQEGKAYVDDTPA 296
Query: 1101 EELKGHNP--LPSPWRDRPIEESLLLFEAMRKGKFAEGEATLRMKLVMEDGK---MDPVA 1265
E++K + S R +E++L ++E M+KG LR K+ M DP
Sbjct: 297 EQMKAEREQRIESKHRKNSVEKNLQMWEEMKKGSQFGQSCCLRAKIDMSSNNGCMRDPTL 356
Query: 1266 YRVKYTPHHRTGDTWCIYPTYDYTHCLCDSIEHITHSLCTKEFQARRSSYFWLCNALDVY 1445
YR K PH RTG+ + +YPTYD+ + DSIE +TH+L T E+ R ++W+ AL +
Sbjct: 357 YRCKIQPHPRTGNKYNVYPTYDFACPIVDSIEGVTHALRTTEYHDRDEQFYWIIEALGIR 416
Query: 1446 CPVQWEYGRLNLHYAVVSKRKILQLVAAGAVRDWDDPRLFTLTALRRRGFPPEAINNFCA 1625
P WEY RLNL+ V+SKRK+ V G V WDDPR T+ + RRG E + F A
Sbjct: 417 KPYIWEYSRLNLNNTVLSKRKLTWFVNEGLVDGWDDPRFPTVRGVLRRGMTVEGLKQFIA 476
Query: 1626 RVGVTVAQTTMEPHLLEACVRDVLNDTAPRAMAVLDSLQVVITNFPAAKLLDIQVPNFPA 1805
G + + ME + A + V++ APR +A+L +V+ N P A+ +V P
Sbjct: 477 AQGSSRSVVNMEWDKIWAFNKKVIDPVAPRYVALLKK-EVIPVNIPEAQEEMKEVAKHPK 535
Query: 1806 DETKGFHQVPFGPTVFIERTDFKEEPEPGYKRLAWGQPVGLRHTGYVIELQHVVKGPNGC 1985
+ G V + VFIE D + L+ G+ V + G I + + K +G
Sbjct: 536 NPDVGLKPVWYSSKVFIEGAD--------AETLSEGEMVTFINWGN-INIAKIHKNADGK 586
Query: 1986 VESLEVTCRRADVGGKPKAFIHWVSQ 2063
+ESL+ + K I W+++
Sbjct: 587 IESLDAKLNLENKDYKKTTKITWLAE 612
>ref|XP_536120.2| PREDICTED: similar to glutamyl-prolyl tRNA synthetase isoform 1
[Canis familiaris].
Length = 1534
Score = 244 bits (624), Expect = 2e-64
Identities = 156/446 (34%), Positives = 227/446 (50%), Gaps = 8/446 (1%)
Frame = +3
Query: 750 TPHTMDLLKQHLEITG---GQIRTRFPPEPNGILHIGHAKAINFNFGYAKANNGICFLRF 920
TP + + +E+ G G++ RFPPE +G LHIGHAKA N Y G +RF
Sbjct: 177 TPEKKQDVGKFVELPGAEMGKVTVRFPPEASGYLHIGHAKAALLNQHYQVNFKGKLIMRF 236
Query: 921 DDTNPEKEEAKFFTAICDMVAWLGYTPYKVTYASDYFDQLYAWAVELIHRGLAYVCHQRG 1100
DDTNPEKE+ F I + VA L P + TY SD+F+ + +A +LI G AYV
Sbjct: 237 DDTNPEKEKEDFEKVILEDVAMLHIKPDQFTYTSDHFETIMKYAEKLIQEGKAYVDDTPA 296
Query: 1101 EELKGHNP--LPSPWRDRPIEESLLLFEAMRKGKFAEGEATLRMKLVMEDGK---MDPVA 1265
E++K + S R +E++L ++E M+KG LR K+ M DP
Sbjct: 297 EQMKAEREQRIESKHRKNSVEKNLQMWEEMKKGSQFGQSCCLRAKIDMSSNNGCMRDPTL 356
Query: 1266 YRVKYTPHHRTGDTWCIYPTYDYTHCLCDSIEHITHSLCTKEFQARRSSYFWLCNALDVY 1445
YR K PH RTG+ + +YPTYD+ + DSIE +TH+L T E+ R ++W+ AL +
Sbjct: 357 YRCKIQPHPRTGNKYNVYPTYDFACPIVDSIEGVTHALRTTEYHDRDEQFYWIIEALGIR 416
Query: 1446 CPVQWEYGRLNLHYAVVSKRKILQLVAAGAVRDWDDPRLFTLTALRRRGFPPEAINNFCA 1625
P WEY RLNL+ V+SKRK+ V G V WDDPR T+ + RRG E + F A
Sbjct: 417 KPYIWEYSRLNLNNTVLSKRKLTWFVNEGLVDGWDDPRFPTVRGVLRRGMTVEGLKQFIA 476
Query: 1626 RVGVTVAQTTMEPHLLEACVRDVLNDTAPRAMAVLDSLQVVITNFPAAKLLDIQVPNFPA 1805
G + + ME + A + V++ APR +A+L +V+ N P A+ +V P
Sbjct: 477 AQGSSRSVVNMEWDKIWAFNKKVIDPVAPRYVALLKK-EVIPVNIPEAQEEMKEVAKHPK 535
Query: 1806 DETKGFHQVPFGPTVFIERTDFKEEPEPGYKRLAWGQPVGLRHTGYVIELQHVVKGPNGC 1985
+ G V + VFIE D + L+ G+ V + G I + + K +G
Sbjct: 536 NPDVGLKPVWYSSKVFIEGAD--------AETLSEGEMVTFINWGN-INIAKIHKNADGK 586
Query: 1986 VESLEVTCRRADVGGKPKAFIHWVSQ 2063
+ESL+ + K I W+++
Sbjct: 587 IESLDAKLNLENKDYKKTTKITWLAE 612
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 98,476,242
Number of extensions: 2955120
Number of successful extensions: 10356
Number of sequences better than 1.0e-05: 14
Number of HSP's gapped: 10306
Number of HSP's successfully gapped: 16
Length of query: 730
Length of database: 18,874,504
Length adjustment: 110
Effective length of query: 620
Effective length of database: 15,207,544
Effective search space: 9428677280
Effective search space used: 9428677280
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002089
(2192 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_005042.1| glutaminyl-tRNA synthetase [Homo sapiens]. 1373 0.0
Alignment gi|NP_004437.2| bifunctional aminoacyl-tRNA synthetase [Homo sa... 244 2e-64
Alignment gi|NP_001077083.1| probable glutamyl-tRNA synthetase, mitochond... 55 3e-07
>ref|NP_005042.1| glutaminyl-tRNA synthetase [Homo sapiens].
Length = 775
Score = 1373 bits (3554), Expect = 0.0
Identities = 666/712 (93%), Positives = 685/712 (96%)
Frame = +3
Query: 15 MAALDSLSLFTGLGLSEHKARETLKNTALSAQLREAATQAQQTLGSTIDKATGTLLYGLA 194
MAALDSLSLFT LGLSE KARETLKN+ALSAQLREAATQAQQTLGSTIDKATG LLYGLA
Sbjct: 1 MAALDSLSLFTSLGLSEQKARETLKNSALSAQLREAATQAQQTLGSTIDKATGILLYGLA 60
Query: 195 SRLRDPRRLSFLVSYIASRKIHTETQLSAALEYVRSHPLDPINTMDFEQECGVGVIVTPE 374
SRLRD RRLSFLVSYIAS+KIHTE QLSAALEYVRSHPLDPI+T+DFE+ECGVGVIVTPE
Sbjct: 61 SRLRDTRRLSFLVSYIASKKIHTEPQLSAALEYVRSHPLDPIDTVDFERECGVGVIVTPE 120
Query: 375 QIEEAVEAAINHHRSKLLVERYHFNMGLLMGEARAALKWADGKMIKHEVDMQVLHLLGPK 554
QIEEAVEAAIN HR +LLVERYHFNMGLLMGEARA LKWADGKMIK+EVDMQVLHLLGPK
Sbjct: 121 QIEEAVEAAINRHRPQLLVERYHFNMGLLMGEARAVLKWADGKMIKNEVDMQVLHLLGPK 180
Query: 555 TESDLEKKPKVAKARLEEKDRVTAKDVVENGEAVVQTLSLMEQLRGEALKFHKPGENYKT 734
E+DLEKK KVAKARLEE DR TAKDVVENGE QTLSLMEQLRGEALKFHKPGENYKT
Sbjct: 181 LEADLEKKFKVAKARLEETDRRTAKDVVENGETADQTLSLMEQLRGEALKFHKPGENYKT 240
Query: 735 PGYVTTPHTMDLLKQHLEITGGQIRTRFPPEPNGILHIGHAKAINFNFGYAKANNGICFL 914
PGYV TPHTM+LLKQHLEITGGQ+RTRFPPEPNGILHIGHAKAINFNFGYAKANNGICFL
Sbjct: 241 PGYVVTPHTMNLLKQHLEITGGQVRTRFPPEPNGILHIGHAKAINFNFGYAKANNGICFL 300
Query: 915 RFDDTNPEKEEAKFFTAICDMVAWLGYTPYKVTYASDYFDQLYAWAVELIHRGLAYVCHQ 1094
RFDDTNPEKEEAKFFTAICDMVAWLGYTPYKVTYASDYFDQLYAWAVELI RGLAYVCHQ
Sbjct: 301 RFDDTNPEKEEAKFFTAICDMVAWLGYTPYKVTYASDYFDQLYAWAVELIRRGLAYVCHQ 360
Query: 1095 RGEELKGHNPLPSPWRDRPIEESLLLFEAMRKGKFAEGEATLRMKLVMEDGKMDPVAYRV 1274
RGEELKGHN LPSPWRDRP+EESLLLFEAMRKGKF+EGEATLRMKLVMEDGKMDPVAYRV
Sbjct: 361 RGEELKGHNTLPSPWRDRPMEESLLLFEAMRKGKFSEGEATLRMKLVMEDGKMDPVAYRV 420
Query: 1275 KYTPHHRTGDTWCIYPTYDYTHCLCDSIEHITHSLCTKEFQARRSSYFWLCNALDVYCPV 1454
KYTPHHRTGD WCIYPTYDYTHCLCDSIEHITHSLCTKEFQARRSSYFWLCNALDVYCPV
Sbjct: 421 KYTPHHRTGDKWCIYPTYDYTHCLCDSIEHITHSLCTKEFQARRSSYFWLCNALDVYCPV 480
Query: 1455 QWEYGRLNLHYAVVSKRKILQLVAAGAVRDWDDPRLFTLTALRRRGFPPEAINNFCARVG 1634
QWEYGRLNLHYAVVSKRKILQLVA GAVRDWDDPRLFTLTALRRRGFPPEAINNFCARVG
Sbjct: 481 QWEYGRLNLHYAVVSKRKILQLVATGAVRDWDDPRLFTLTALRRRGFPPEAINNFCARVG 540
Query: 1635 VTVAQTTMEPHLLEACVRDVLNDTAPRAMAVLDSLQVVITNFPAAKLLDIQVPNFPADET 1814
VTVAQTTMEPHLLEACVRDVLNDTAPRAMAVL+SL+V+ITNFPAAK LDIQVPNFPADET
Sbjct: 541 VTVAQTTMEPHLLEACVRDVLNDTAPRAMAVLESLRVIITNFPAAKSLDIQVPNFPADET 600
Query: 1815 KGFHQVPFGPTVFIERTDFKEEPEPGYKRLAWGQPVGLRHTGYVIELQHVVKGPNGCVES 1994
KGFHQVPF P VFIERTDFKEEPEPG+KRLAWGQPVGLRHTGYVIELQHVVKGP+GCVES
Sbjct: 601 KGFHQVPFAPIVFIERTDFKEEPEPGFKRLAWGQPVGLRHTGYVIELQHVVKGPSGCVES 660
Query: 1995 LEVTCRRADVGGKPKAFIHWVSQPLTCEIRLYDRLFQHKNPEDPAEVPGGFL 2150
LEVTCRRAD G KPKAFIHWVSQPL CE+RLY+RLFQHKNPEDP EVPGGFL
Sbjct: 661 LEVTCRRADAGEKPKAFIHWVSQPLMCEVRLYERLFQHKNPEDPTEVPGGFL 712
>ref|NP_004437.2| bifunctional aminoacyl-tRNA synthetase [Homo sapiens].
Length = 1512
Score = 244 bits (624), Expect = 2e-64
Identities = 152/427 (35%), Positives = 219/427 (51%), Gaps = 5/427 (1%)
Frame = +3
Query: 798 GQIRTRFPPEPNGILHIGHAKAINFNFGYAKANNGICFLRFDDTNPEKEEAKFFTAICDM 977
G++ RFPPE +G LHIGHAKA N Y G +RFDDTNPEKE+ F I +
Sbjct: 196 GKVTVRFPPEASGYLHIGHAKAALLNQHYQVNFKGKLIMRFDDTNPEKEKEDFEKVILED 255
Query: 978 VAWLGYTPYKVTYASDYFDQLYAWAVELIHRGLAYVCHQRGEELKGHNP--LPSPWRDRP 1151
VA L P + TY SD+F+ + +A +LI G AYV E++K + S R P
Sbjct: 256 VAMLHIKPDQFTYTSDHFETIMKYAEKLIQEGKAYVDDTPAEQMKAEREQRIDSKHRKNP 315
Query: 1152 IEESLLLFEAMRKGKFAEGEATLRMKLVMEDGK---MDPVAYRVKYTPHHRTGDTWCIYP 1322
IE++L ++E M+KG LR K+ M DP YR K PH RTG+ + +YP
Sbjct: 316 IEKNLQMWEEMKKGSQFGQSCCLRAKIDMSSNNGCMRDPTLYRCKIQPHPRTGNKYNVYP 375
Query: 1323 TYDYTHCLCDSIEHITHSLCTKEFQARRSSYFWLCNALDVYCPVQWEYGRLNLHYAVVSK 1502
TYD+ + DSIE +TH+L T E+ R ++W+ AL + P WEY RLNL+ V+SK
Sbjct: 376 TYDFACPIVDSIEGVTHALRTTEYHDRDEQFYWIIEALGIRKPYIWEYSRLNLNNTVLSK 435
Query: 1503 RKILQLVAAGAVRDWDDPRLFTLTALRRRGFPPEAINNFCARVGVTVAQTTMEPHLLEAC 1682
RK+ V G V WDDPR T+ + RRG E + F A G + + ME + A
Sbjct: 436 RKLTWFVNEGLVDGWDDPRFPTVRGVLRRGMTVEGLKQFIAAQGSSRSVVNMEWDKIWAF 495
Query: 1683 VRDVLNDTAPRAMAVLDSLQVVITNFPAAKLLDIQVPNFPADETKGFHQVPFGPTVFIER 1862
+ V++ APR +A+L +V+ N P A+ +V P + G V + P VFIE
Sbjct: 496 NKKVIDPVAPRYVALLKK-EVIPVNVPEAQEEMKEVAKHPKNPEVGLKPVWYSPKVFIEG 554
Query: 1863 TDFKEEPEPGYKRLAWGQPVGLRHTGYVIELQHVVKGPNGCVESLEVTCRRADVGGKPKA 2042
D + E G+ V + G + + + K +G + SL+ + K
Sbjct: 555 ADAETFSE--------GEMVTFINWGN-LNITKIHKNADGKIISLDAKLNLENKDYKKTT 605
Query: 2043 FIHWVSQ 2063
+ W+++
Sbjct: 606 KVTWLAE 612
>ref|NP_001077083.1| probable glutamyl-tRNA synthetase, mitochondrial precursor [Homo
sapiens].
Length = 523
Score = 54.7 bits (130), Expect = 3e-07
Identities = 40/118 (33%), Positives = 53/118 (44%), Gaps = 12/118 (10%)
Frame = +3
Query: 795 GGQIRTRFPPEPNGILHIGHAKAINFNFGYAKANNGICFLRFDDTNPEKEEAKFFTAICD 974
G +R RF P P G LH+G + +N+ +AK G LR +DT+ + I D
Sbjct: 34 GVAVRVRFAPSPTGFLHLGGLRTALYNYIFAKKYQGSFILRLEDTDQTRVVPGAAENIED 93
Query: 975 MVAWLGYTPYKV--------TYASDYFDQLYAWAVE-LIHRGLAYVCH---QRGEELK 1112
M+ W G P + Y +LYA A E L+ G AY C QR E LK
Sbjct: 94 MLEWAGIPPDESPRRGGPAGPYQQSQRLELYAQATEALLKTGAAYPCFCSPQRLELLK 151
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 96,791,978
Number of extensions: 2913381
Number of successful extensions: 9684
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 9634
Number of HSP's successfully gapped: 3
Length of query: 730
Length of database: 18,297,164
Length adjustment: 110
Effective length of query: 620
Effective length of database: 14,671,124
Effective search space: 9096096880
Effective search space used: 9096096880
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002089
(2192 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_598555.2| glutaminyl-tRNA synthetase isoform 1 [Mus muscu... 1308 0.0
Alignment gi|NP_001161742.1| glutaminyl-tRNA synthetase isoform 2 [Mus mu... 1039 0.0
Alignment gi|NP_084011.1| bifunctional aminoacyl-tRNA synthetase [Mus mus... 238 1e-62
Alignment gi|NP_080416.1| probable glutamyl-tRNA synthetase, mitochondria... 60 9e-09
>ref|NP_598555.2| glutaminyl-tRNA synthetase isoform 1 [Mus musculus].
Length = 775
Score = 1308 bits (3384), Expect = 0.0
Identities = 639/712 (89%), Positives = 661/712 (92%)
Frame = +3
Query: 15 MAALDSLSLFTGLGLSEHKARETLKNTALSAQLREAATQAQQTLGSTIDKATGTLLYGLA 194
MA DSL+LFTGLGLSE+KARETLKN ALS QLREAATQA Q LGSTIDKATG LLY L
Sbjct: 1 MATPDSLALFTGLGLSENKARETLKNEALSTQLREAATQAHQILGSTIDKATGVLLYDLV 60
Query: 195 SRLRDPRRLSFLVSYIASRKIHTETQLSAALEYVRSHPLDPINTMDFEQECGVGVIVTPE 374
SRLRD RR SFLVSYIA++KIHT QLSAALEYVRSHP DPI+T DFEQECGVGV+VTPE
Sbjct: 61 SRLRDTRRRSFLVSYIANKKIHTGLQLSAALEYVRSHPQDPIDTKDFEQECGVGVVVTPE 120
Query: 375 QIEEAVEAAINHHRSKLLVERYHFNMGLLMGEARAALKWADGKMIKHEVDMQVLHLLGPK 554
QIEEAVE+ IN H+ +LL ERY FNMGLLMGEARAAL+WADGKMIK+EVDMQVLHLLGPK
Sbjct: 121 QIEEAVESTINKHQLQLLAERYRFNMGLLMGEARAALRWADGKMIKNEVDMQVLHLLGPK 180
Query: 555 TESDLEKKPKVAKARLEEKDRVTAKDVVENGEAVVQTLSLMEQLRGEALKFHKPGENYKT 734
E+DL KKPKVAKARLEE DR TAKDVVE GE QTLSLMEQLRGEALKFHKPGENYKT
Sbjct: 181 MEADLVKKPKVAKARLEETDRKTAKDVVEKGEVAGQTLSLMEQLRGEALKFHKPGENYKT 240
Query: 735 PGYVTTPHTMDLLKQHLEITGGQIRTRFPPEPNGILHIGHAKAINFNFGYAKANNGICFL 914
PGYV TP+TMDLLKQHLEITGGQ+RTRFPPEPNGILHIGHAKAINFNFGYAKANNGICFL
Sbjct: 241 PGYVITPYTMDLLKQHLEITGGQVRTRFPPEPNGILHIGHAKAINFNFGYAKANNGICFL 300
Query: 915 RFDDTNPEKEEAKFFTAICDMVAWLGYTPYKVTYASDYFDQLYAWAVELIHRGLAYVCHQ 1094
RFDDTNPEKEEAKFFTAI DMV WLGYTPYKVTYASDYFDQLYAWAVELIH GLAYVCHQ
Sbjct: 301 RFDDTNPEKEEAKFFTAIYDMVTWLGYTPYKVTYASDYFDQLYAWAVELIHGGLAYVCHQ 360
Query: 1095 RGEELKGHNPLPSPWRDRPIEESLLLFEAMRKGKFAEGEATLRMKLVMEDGKMDPVAYRV 1274
R EELKGHNPLPSPWRDRP EESLLLFEAMRKGKFAEGEATLRMKLVMEDGKMDPVAYRV
Sbjct: 361 RVEELKGHNPLPSPWRDRPKEESLLLFEAMRKGKFAEGEATLRMKLVMEDGKMDPVAYRV 420
Query: 1275 KYTPHHRTGDTWCIYPTYDYTHCLCDSIEHITHSLCTKEFQARRSSYFWLCNALDVYCPV 1454
KYTPHHRTGD WCIYPTYDYTHCLCDSIEHITHSLCTKEFQARRSSYFWLCNAL VYCPV
Sbjct: 421 KYTPHHRTGDKWCIYPTYDYTHCLCDSIEHITHSLCTKEFQARRSSYFWLCNALKVYCPV 480
Query: 1455 QWEYGRLNLHYAVVSKRKILQLVAAGAVRDWDDPRLFTLTALRRRGFPPEAINNFCARVG 1634
QWEYGRLNLHYAVVSKRKILQLVAAGAVRDWDDPRLFTLTALRRRGFPPEAINNFCARVG
Sbjct: 481 QWEYGRLNLHYAVVSKRKILQLVAAGAVRDWDDPRLFTLTALRRRGFPPEAINNFCARVG 540
Query: 1635 VTVAQTTMEPHLLEACVRDVLNDTAPRAMAVLDSLQVVITNFPAAKLLDIQVPNFPADET 1814
VTVAQTTMEPHLLEACVRDVLND APRAMAVL+ LQVVITNFPA K LDI+VPNFPADET
Sbjct: 541 VTVAQTTMEPHLLEACVRDVLNDAAPRAMAVLEPLQVVITNFPAPKPLDIRVPNFPADET 600
Query: 1815 KGFHQVPFGPTVFIERTDFKEEPEPGYKRLAWGQPVGLRHTGYVIELQHVVKGPNGCVES 1994
KGFHQVPF TVFIER+DFKEE EPGYKRLA GQPVGLRHTGYVIELQ++V+G +GCVE
Sbjct: 601 KGFHQVPFASTVFIERSDFKEESEPGYKRLASGQPVGLRHTGYVIELQNIVRGSSGCVER 660
Query: 1995 LEVTCRRADVGGKPKAFIHWVSQPLTCEIRLYDRLFQHKNPEDPAEVPGGFL 2150
LEVTCRRAD G KPKAFIHWVSQPL CEIRLY+ LFQHKNPEDP EVPGGFL
Sbjct: 661 LEVTCRRADAGEKPKAFIHWVSQPLVCEIRLYECLFQHKNPEDPVEVPGGFL 712
>ref|NP_001161742.1| glutaminyl-tRNA synthetase isoform 2 [Mus musculus].
Length = 606
Score = 1039 bits (2686), Expect = 0.0
Identities = 498/541 (92%), Positives = 510/541 (94%)
Frame = +3
Query: 528 QVLHLLGPKTESDLEKKPKVAKARLEEKDRVTAKDVVENGEAVVQTLSLMEQLRGEALKF 707
+VLHLLGPK E+DL KKPKVAKARLEE DR TAKDVVE GE QTLSLMEQLRGEALKF
Sbjct: 3 EVLHLLGPKMEADLVKKPKVAKARLEETDRKTAKDVVEKGEVAGQTLSLMEQLRGEALKF 62
Query: 708 HKPGENYKTPGYVTTPHTMDLLKQHLEITGGQIRTRFPPEPNGILHIGHAKAINFNFGYA 887
HKPGENYKTPGYV TP+TMDLLKQHLEITGGQ+RTRFPPEPNGILHIGHAKAINFNFGYA
Sbjct: 63 HKPGENYKTPGYVITPYTMDLLKQHLEITGGQVRTRFPPEPNGILHIGHAKAINFNFGYA 122
Query: 888 KANNGICFLRFDDTNPEKEEAKFFTAICDMVAWLGYTPYKVTYASDYFDQLYAWAVELIH 1067
KANNGICFLRFDDTNPEKEEAKFFTAI DMV WLGYTPYKVTYASDYFDQLYAWAVELIH
Sbjct: 123 KANNGICFLRFDDTNPEKEEAKFFTAIYDMVTWLGYTPYKVTYASDYFDQLYAWAVELIH 182
Query: 1068 RGLAYVCHQRGEELKGHNPLPSPWRDRPIEESLLLFEAMRKGKFAEGEATLRMKLVMEDG 1247
GLAYVCHQR EELKGHNPLPSPWRDRP EESLLLFEAMRKGKFAEGEATLRMKLVMEDG
Sbjct: 183 GGLAYVCHQRVEELKGHNPLPSPWRDRPKEESLLLFEAMRKGKFAEGEATLRMKLVMEDG 242
Query: 1248 KMDPVAYRVKYTPHHRTGDTWCIYPTYDYTHCLCDSIEHITHSLCTKEFQARRSSYFWLC 1427
KMDPVAYRVKYTPHHRTGD WCIYPTYDYTHCLCDSIEHITHSLCTKEFQARRSSYFWLC
Sbjct: 243 KMDPVAYRVKYTPHHRTGDKWCIYPTYDYTHCLCDSIEHITHSLCTKEFQARRSSYFWLC 302
Query: 1428 NALDVYCPVQWEYGRLNLHYAVVSKRKILQLVAAGAVRDWDDPRLFTLTALRRRGFPPEA 1607
NAL VYCPVQWEYGRLNLHYAVVSKRKILQLVAAGAVRDWDDPRLFTLTALRRRGFPPEA
Sbjct: 303 NALKVYCPVQWEYGRLNLHYAVVSKRKILQLVAAGAVRDWDDPRLFTLTALRRRGFPPEA 362
Query: 1608 INNFCARVGVTVAQTTMEPHLLEACVRDVLNDTAPRAMAVLDSLQVVITNFPAAKLLDIQ 1787
INNFCARVGVTVAQTTMEPHLLEACVRDVLND APRAMAVL+ LQVVITNFPA K LDI+
Sbjct: 363 INNFCARVGVTVAQTTMEPHLLEACVRDVLNDAAPRAMAVLEPLQVVITNFPAPKPLDIR 422
Query: 1788 VPNFPADETKGFHQVPFGPTVFIERTDFKEEPEPGYKRLAWGQPVGLRHTGYVIELQHVV 1967
VPNFPADETKGFHQVPF TVFIER+DFKEE EPGYKRLA GQPVGLRHTGYVIELQ++V
Sbjct: 423 VPNFPADETKGFHQVPFASTVFIERSDFKEESEPGYKRLASGQPVGLRHTGYVIELQNIV 482
Query: 1968 KGPNGCVESLEVTCRRADVGGKPKAFIHWVSQPLTCEIRLYDRLFQHKNPEDPAEVPGGF 2147
+G +GCVE LEVTCRRAD G KPKAFIHWVSQPL CEIRLY+ LFQHKNPEDP EVPGGF
Sbjct: 483 RGSSGCVERLEVTCRRADAGEKPKAFIHWVSQPLVCEIRLYECLFQHKNPEDPVEVPGGF 542
Query: 2148 L 2150
L
Sbjct: 543 L 543
>ref|NP_084011.1| bifunctional aminoacyl-tRNA synthetase [Mus musculus].
Length = 1512
Score = 238 bits (607), Expect = 1e-62
Identities = 152/427 (35%), Positives = 216/427 (50%), Gaps = 5/427 (1%)
Frame = +3
Query: 798 GQIRTRFPPEPNGILHIGHAKAINFNFGYAKANNGICFLRFDDTNPEKEEAKFFTAICDM 977
G++ RFPPE +G LHIGHAKA N Y G +RFDDTNPEKE+ F I +
Sbjct: 196 GKVTVRFPPEASGYLHIGHAKAALLNQHYQVNFKGKLIMRFDDTNPEKEKEDFEKVILED 255
Query: 978 VAWLGYTPYKVTYASDYFDQLYAWAVELIHRGLAYVCHQRGEELKGHNP--LPSPWRDRP 1151
VA L P + TY SD+F+ + +A +LI G AYV E++K S R
Sbjct: 256 VAMLHIKPDQFTYTSDHFETIMKYAEKLIQEGKAYVDDTPAEQMKAEREQRTESKHRKNS 315
Query: 1152 IEESLLLFEAMRKGKFAEGEATLRMKLVMEDGK---MDPVAYRVKYTPHHRTGDTWCIYP 1322
+E++L ++E M+KG LR K+ M DP YR K PH RTG+ + +YP
Sbjct: 316 VEKNLQMWEEMKKGSQFGQSCCLRAKIDMSSNNGCMRDPTLYRCKIQPHPRTGNKYNVYP 375
Query: 1323 TYDYTHCLCDSIEHITHSLCTKEFQARRSSYFWLCNALDVYCPVQWEYGRLNLHYAVVSK 1502
TYD+ + DSIE +TH+L T E+ R ++W+ AL + P WEY RLNL+ V+SK
Sbjct: 376 TYDFACPIVDSIEGVTHALRTTEYHDRDEQFYWIIEALGIRKPYIWEYSRLNLNNTVLSK 435
Query: 1503 RKILQLVAAGAVRDWDDPRLFTLTALRRRGFPPEAINNFCARVGVTVAQTTMEPHLLEAC 1682
RK+ V G V WDDPR T+ + RRG E + F A G + + ME + A
Sbjct: 436 RKLTWFVNEGLVDGWDDPRFPTVRGVLRRGMTVEGLKQFIAAQGSSRSVVNMEWDKIWAF 495
Query: 1683 VRDVLNDTAPRAMAVLDSLQVVITNFPAAKLLDIQVPNFPADETKGFHQVPFGPTVFIER 1862
+ V++ APR +A+L +VV N A+ +V P + G V + P VFIE
Sbjct: 496 NKKVIDPVAPRYVALLKK-EVVPVNVLDAQEEMKEVARHPKNPDVGLKPVWYSPKVFIEG 554
Query: 1863 TDFKEEPEPGYKRLAWGQPVGLRHTGYVIELQHVVKGPNGCVESLEVTCRRADVGGKPKA 2042
D + E G+ V + G I + + K +G + SL+ + K
Sbjct: 555 ADAETFSE--------GEMVTFINWGN-INITKIHKNADGKITSLDAKLNLENKDYKKTT 605
Query: 2043 FIHWVSQ 2063
I W+++
Sbjct: 606 KITWLAE 612
>ref|NP_080416.1| probable glutamyl-tRNA synthetase, mitochondrial precursor [Mus
musculus].
Length = 523
Score = 59.7 bits (143), Expect = 9e-09
Identities = 89/336 (26%), Positives = 128/336 (38%), Gaps = 21/336 (6%)
Frame = +3
Query: 795 GGQIRTRFPPEPNGILHIGHAKAINFNFGYAKANNGICFLRFDDTNPEKEEAKFFTAICD 974
G +R RF P P G LH+G + +N+ +AK + G LR +DT+ + +I D
Sbjct: 34 GAPVRVRFAPSPTGFLHLGGLRTALYNYIFAKKHQGSFILRLEDTDQSRLVPGAAESIED 93
Query: 975 MVAWLGYTPYKV--------TYASDYFDQLYAWAVE-LIHRGLAYVCH---QRGEELKGH 1118
M+ W G P + Y LYA A E L+ G AY C QR E LK
Sbjct: 94 MLEWAGIPPDESPRRGGPAGPYCQSQRLALYAQATEALLRSGAAYPCFCLPQRLELLK-K 152
Query: 1119 NPLPSPWRDRPIEESLLLFEAMRKGKFA-EGEATLRMKLVMEDGKMDPVAYRVKYTPHHR 1295
L S R L +A K A + + +R +L + Y +T H
Sbjct: 153 EALRSRQTPRYDNRCRNLSQAQVAQKLAVDPKPAIRFRLEEAVPAFQDLVY--GWTQHEV 210
Query: 1296 T---GDTWCI----YPTYDYTHCLCDSIEHITHSLCTKEFQARRSSYFWLCNALDVYCPV 1454
GD + +PTY + D I+H L E+ S + L AL
Sbjct: 211 ASVEGDPVILKSDGFPTYHLACVVDDHHMSISHVLRGSEWLVSTSKHLLLYQALG----- 265
Query: 1455 QWEYGRLNLHYAVVSKRKILQLVAAGAVRDWDDPRLFTLTALRRRGFPPEAINNFCARVG 1634
W+ R H ++ R +L + R D L GF PEA+ + G
Sbjct: 266 -WQPPRF-AHLPLLLNRDGSKL----SKRQGD----IFLEHFAATGFLPEALLDIITNCG 315
Query: 1635 VTVAQTTMEPHLLEACVR-DVLNDTAPRAMAVLDSL 1739
A+ M L E + D+ T A+ L+ L
Sbjct: 316 SGFAENQMGRTLPELITQFDLTRITCHSALLDLEKL 351
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 81,920,715
Number of extensions: 2438456
Number of successful extensions: 8336
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 8303
Number of HSP's successfully gapped: 4
Length of query: 730
Length of database: 15,617,559
Length adjustment: 109
Effective length of query: 621
Effective length of database: 12,343,635
Effective search space: 7665397335
Effective search space used: 7665397335
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002089
(2192 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_003130565.1| PREDICTED: LOW QUALITY PROTEIN: bifunctional... 239 3e-63
Alignment gi|XP_003130516.1| PREDICTED: probable glutamyl-tRNA synthetase... 56 9e-08
>ref|XP_003130565.1| PREDICTED: LOW QUALITY PROTEIN: bifunctional aminoacyl-tRNA
synthetase [Sus scrofa].
Length = 1432
Score = 239 bits (611), Expect = 3e-63
Identities = 154/434 (35%), Positives = 220/434 (50%), Gaps = 8/434 (1%)
Frame = +3
Query: 723 NYKTPGYVTTPHTMDLLKQHLEITG---GQIRTRFPPEPNGILHIGHAKAINFNFGYAKA 893
N T P + + +E+ G G++ RFPPE +G LHIGHAKA N Y
Sbjct: 168 NASTTKAKVVPEKKQDVGKFVELPGAEMGKVTVRFPPEASGYLHIGHAKAALLNQHYQVN 227
Query: 894 NNGICFLRFDDTNPEKEEAKFFTAICDMVAWLGYTPYKVTYASDYFDQLYAWAVELIHRG 1073
G +RFDDTNPEKE+ F I + VA L P + TY SD+F+ + +A +LI G
Sbjct: 228 FKGKLIMRFDDTNPEKEKEDFEKVILEDVAMLHIKPDQFTYTSDHFETIMKYAEKLIQEG 287
Query: 1074 LAYVCHQRGEELKGHNP--LPSPWRDRPIEESLLLFEAMRKGKFAEGEATLRMKLVMEDG 1247
AYV E++K + S R +E++L ++E M+KG LR K+ M
Sbjct: 288 KAYVDDTPAEQMKAEREQRIESKHRANSVEKNLQMWEEMKKGSQFGQSCCLRAKIDMSSN 347
Query: 1248 K---MDPVAYRVKYTPHHRTGDTWCIYPTYDYTHCLCDSIEHITHSLCTKEFQARRSSYF 1418
DP YR K PH RTG+ + +YPTYD+ + DSIE +TH+L T E+ R ++
Sbjct: 348 NGCMRDPTLYRCKIQPHPRTGNKYNVYPTYDFACPIVDSIEGVTHALRTTEYHDRDEQFY 407
Query: 1419 WLCNALDVYCPVQWEYGRLNLHYAVVSKRKILQLVAAGAVRDWDDPRLFTLTALRRRGFP 1598
W+ AL + P WEY RLNL+ V+SKRK+ V G V WDDPR T+ + RRG
Sbjct: 408 WIIEALGIRKPYIWEYSRLNLNNTVLSKRKLTWFVDEGLVDGWDDPRFPTVRGVLRRGMT 467
Query: 1599 PEAINNFCARVGVTVAQTTMEPHLLEACVRDVLNDTAPRAMAVLDSLQVVITNFPAAKLL 1778
E + F A G + + ME + A + V++ APR +A+L + V N P A+
Sbjct: 468 VEGLKQFIAAQGSSRSIVNMEWDKIWAFNKKVIDPVAPRYVALLKK-EAVPVNIPEAQEE 526
Query: 1779 DIQVPNFPADETKGFHQVPFGPTVFIERTDFKEEPEPGYKRLAWGQPVGLRHTGYVIELQ 1958
+V P + G V + P VFIE D + L+ G+ V + G I +
Sbjct: 527 MKEVAKHPKNPDVGLKPVWYSPKVFIEGAD--------AETLSEGEMVTFINWGN-INIT 577
Query: 1959 HVVKGPNGCVESLE 2000
+ K +G + SL+
Sbjct: 578 KIHKNADGKITSLD 591
>ref|XP_003130516.1| PREDICTED: probable glutamyl-tRNA synthetase, mitochondrial-like [Sus
scrofa].
Length = 523
Score = 55.8 bits (133), Expect = 9e-08
Identities = 41/118 (34%), Positives = 55/118 (46%), Gaps = 12/118 (10%)
Frame = +3
Query: 795 GGQIRTRFPPEPNGILHIGHAKAINFNFGYAKANNGICFLRFDDTNPEKEEAKFFTAICD 974
G +R RF P P G LH+G + +N+ +AK + G LR +DT+ + I D
Sbjct: 34 GAAVRVRFAPSPTGFLHLGGLRTALYNYIFAKKHGGSFILRLEDTDQTRLVPGAAENIED 93
Query: 975 MVAWLGY----TPYKVTYASDYFDQ----LYAWAVE-LIHRGLAYVCH---QRGEELK 1112
M+ W G +P + A Y LYA A E L+ G AY C QR E LK
Sbjct: 94 MLEWAGIPPDESPRRGGPAGPYLQSQRLALYAQATEALLKSGAAYPCFCSPQRLELLK 151
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 61,070,855
Number of extensions: 1860805
Number of successful extensions: 6356
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 6335
Number of HSP's successfully gapped: 2
Length of query: 730
Length of database: 11,343,932
Length adjustment: 106
Effective length of query: 624
Effective length of database: 8,704,850
Effective search space: 5431826400
Effective search space used: 5431826400
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002089
(2192 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
***** No hits found ******
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 60,563,742
Number of extensions: 279
Number of successful extensions: 279
Number of sequences better than 1.0e-05: 0
Number of HSP's gapped: 279
Number of HSP's successfully gapped: 0
Length of query: 2192
Length of database: 2,808,509,378
Length adjustment: 22
Effective length of query: 2170
Effective length of database: 2,808,408,574
Effective search space: 6094246605580
Effective search space used: 6094246605580
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)