Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002112
(1329 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_002692229.1| PREDICTED: aldo-keto reductase family 1, mem... 494 e-140
Alignment gi|XP_583064.4| PREDICTED: prostaglandin F synthase 2-like [Bos... 493 e-139
Alignment gi|NP_001159696.1| prostaglandin F synthase 2 [Bos taurus]. 491 e-139
Alignment gi|NP_001161132.1| placental and ovary 20alpha hydroxysteroid d... 489 e-138
Alignment gi|XP_002692230.1| PREDICTED: aldo-keto reductase family 1, mem... 488 e-138
Alignment gi|XP_001250576.2| PREDICTED: aldo-keto reductase family 1, mem... 488 e-138
Alignment gi|XP_002692251.1| PREDICTED: prostaglandin F synthase 2-like [... 488 e-138
Alignment gi|NP_001033673.1| aldo-keto reductase family 1, member C3 (3-a... 486 e-137
Alignment gi|NP_851370.1| dihydrodiol dehydrogenase 3 [Bos taurus]. 485 e-137
Alignment gi|NP_001030444.1| aldo-keto reductase family 1 member C3 -like... 483 e-136
>ref|XP_002692229.1| PREDICTED: aldo-keto reductase family 1, member C3 (3-alpha
hydroxysteroid dehydrogenase, type II)-like [Bos taurus].
Length = 323
Score = 494 bits (1271), Expect = e-140
Identities = 239/316 (75%), Positives = 269/316 (85%)
Frame = +2
Query: 248 VKLNDGHLMPVLGLGTLVSEGVPKSKAGEATRVAIEVGYRHIDAAYVYENEEEVGSALRE 427
VKLNDGH +PVLG GT V VPK +A E TR AIEVG+RHID AYVY+NEE VG A+R
Sbjct: 8 VKLNDGHFIPVLGFGTAVPPEVPKREALEVTRFAIEVGFRHIDCAYVYKNEEHVGQAIRS 67
Query: 428 KIADGTVKREELFYTTKLWATFFRPELVRPALERSLKKLRLDYVDLFIIHVPITMKPGEE 607
KIADGTVKRE++FYT+KLW TF +PELVRPALE+SLK L+LDYVDL+IIH P+ MKPGEE
Sbjct: 68 KIADGTVKREDIFYTSKLWCTFHQPELVRPALEKSLKNLQLDYVDLYIIHFPLAMKPGEE 127
Query: 608 LLPKDASGKVIFDTVDLRDTWAALEKCKDAGLTKSIGVSNFNHKQLEMILNKPGLKYKPV 787
L PKD +GK+IFD VDL TW ALEKCKDAGLTKSIGVSNFN KQLE ILNKPGLKYKPV
Sbjct: 128 LFPKDENGKLIFDLVDLCHTWEALEKCKDAGLTKSIGVSNFNRKQLEKILNKPGLKYKPV 187
Query: 788 CNQVECHPYLNQSKLLEFCKSKDIVLVAYSALGSQRNSKWVEESNPYLLEDPVLNAIAKK 967
CNQVECHPYLNQSKLL+FCKS DIVLVAY ALGSQR +WV ++P LLEDPVL AIAKK
Sbjct: 188 CNQVECHPYLNQSKLLDFCKSHDIVLVAYGALGSQRIKEWVNPNHPVLLEDPVLCAIAKK 247
Query: 968 HNRSPAQVALRYQLQRGVVVLAKSFNEQRIKENFQVFDFELPPEDMKTIDGLNQNLRYFK 1147
H ++PA VAL YQ+QRGVVVLAKS+N++RIKEN QVFDFEL P+DMK IDGLN+NLRY++
Sbjct: 248 HKQTPALVALHYQVQRGVVVLAKSYNKKRIKENIQVFDFELSPDDMKAIDGLNRNLRYYE 307
Query: 1148 LLFAVDHPYYPYSEEY 1195
L + HP YPY EEY
Sbjct: 308 FLIGLSHPEYPYHEEY 323
>ref|XP_583064.4| PREDICTED: prostaglandin F synthase 2-like [Bos taurus].
Length = 323
Score = 493 bits (1269), Expect = e-139
Identities = 234/316 (74%), Positives = 274/316 (86%)
Frame = +2
Query: 248 VKLNDGHLMPVLGLGTLVSEGVPKSKAGEATRVAIEVGYRHIDAAYVYENEEEVGSALRE 427
VKLNDGH +P+LG GT E VPKS+A E TR AIEVG+RHID+A+ Y NEE+VG A+R
Sbjct: 8 VKLNDGHFIPILGFGTYTPEEVPKSEALEVTRFAIEVGFRHIDSAHAYRNEEQVGQAIRS 67
Query: 428 KIADGTVKREELFYTTKLWATFFRPELVRPALERSLKKLRLDYVDLFIIHVPITMKPGEE 607
KIADGTVKRE++FYT+KLW+T +PELV+ ALE+SLK L+LDYVDL++IH P+ +KPGEE
Sbjct: 68 KIADGTVKREDIFYTSKLWSTSLQPELVQSALEKSLKSLQLDYVDLYLIHTPVPLKPGEE 127
Query: 608 LLPKDASGKVIFDTVDLRDTWAALEKCKDAGLTKSIGVSNFNHKQLEMILNKPGLKYKPV 787
+LP GK+I D+VDLR TW ALEKCKDAGLTKSIGVSNFNHKQLE ILNKPGLKYKPV
Sbjct: 128 ILPTGEDGKLILDSVDLRHTWEALEKCKDAGLTKSIGVSNFNHKQLEKILNKPGLKYKPV 187
Query: 788 CNQVECHPYLNQSKLLEFCKSKDIVLVAYSALGSQRNSKWVEESNPYLLEDPVLNAIAKK 967
CNQVECHPYLNQSKLLEFCKS DIVLVAY ALG+QR+SKWV + P LLEDPVL AIAKK
Sbjct: 188 CNQVECHPYLNQSKLLEFCKSHDIVLVAYGALGAQRSSKWVNPNYPILLEDPVLCAIAKK 247
Query: 968 HNRSPAQVALRYQLQRGVVVLAKSFNEQRIKENFQVFDFELPPEDMKTIDGLNQNLRYFK 1147
H ++PA VALRYQ+QRGVVVLAKS+N++RI+EN QVFDFEL PEDM+TIDG+N+N+RY++
Sbjct: 248 HKQTPALVALRYQIQRGVVVLAKSYNKKRIRENIQVFDFELTPEDMETIDGINRNMRYYE 307
Query: 1148 LLFAVDHPYYPYSEEY 1195
L +DHP YPYSEEY
Sbjct: 308 FLPVIDHPEYPYSEEY 323
>ref|NP_001159696.1| prostaglandin F synthase 2 [Bos taurus].
Length = 323
Score = 491 bits (1263), Expect = e-139
Identities = 235/319 (73%), Positives = 276/319 (86%)
Frame = +2
Query: 239 SRCVKLNDGHLMPVLGLGTLVSEGVPKSKAGEATRVAIEVGYRHIDAAYVYENEEEVGSA 418
S+ VKLNDGH +PVLG GT E VPKS+A EAT+ AIEVG+RH+D+A++Y+NEE+VG A
Sbjct: 5 SQRVKLNDGHFIPVLGFGTYAPEEVPKSEALEATKFAIEVGFRHVDSAHLYQNEEQVGQA 64
Query: 419 LREKIADGTVKREELFYTTKLWATFFRPELVRPALERSLKKLRLDYVDLFIIHVPITMKP 598
+R KIADGTVKRE++FYT+KLW +PELVRPALE+SL+ L+LDYVDL+IIH P+++KP
Sbjct: 65 IRSKIADGTVKREDIFYTSKLWCNSLQPELVRPALEKSLQNLQLDYVDLYIIHSPVSLKP 124
Query: 599 GEELLPKDASGKVIFDTVDLRDTWAALEKCKDAGLTKSIGVSNFNHKQLEMILNKPGLKY 778
G + +PKD SGK+IFD+VDL TW ALEKCKDAGLTKSIGVSNFNHKQLE ILNKPGLKY
Sbjct: 125 GNKFVPKDESGKLIFDSVDLCHTWEALEKCKDAGLTKSIGVSNFNHKQLEKILNKPGLKY 184
Query: 779 KPVCNQVECHPYLNQSKLLEFCKSKDIVLVAYSALGSQRNSKWVEESNPYLLEDPVLNAI 958
KPVCNQVECHPYLNQSKLLEFCKS DIVLVAY+ALG+Q S+WV +NP LLEDPVL AI
Sbjct: 185 KPVCNQVECHPYLNQSKLLEFCKSHDIVLVAYAALGAQLLSEWVNSNNPVLLEDPVLCAI 244
Query: 959 AKKHNRSPAQVALRYQLQRGVVVLAKSFNEQRIKENFQVFDFELPPEDMKTIDGLNQNLR 1138
AKKH ++PA VALRYQ+QRGVVVLAKSFN++RIKEN QVFDFEL PEDMK IDGLN+N+R
Sbjct: 245 AKKHKQTPALVALRYQVQRGVVVLAKSFNKKRIKENMQVFDFELTPEDMKAIDGLNRNIR 304
Query: 1139 YFKLLFAVDHPYYPYSEEY 1195
Y+ + HP YP+SEEY
Sbjct: 305 YYDFQKGIGHPEYPFSEEY 323
>ref|NP_001161132.1| placental and ovary 20alpha hydroxysteroid dehydrogenase protein [Bos
taurus].
Length = 323
Score = 489 bits (1259), Expect = e-138
Identities = 234/316 (74%), Positives = 269/316 (85%)
Frame = +2
Query: 248 VKLNDGHLMPVLGLGTLVSEGVPKSKAGEATRVAIEVGYRHIDAAYVYENEEEVGSALRE 427
VKLNDGH +P+LG GT E VPKS+A E T++AIEVG+RHID A++Y+NE +VG A+R
Sbjct: 8 VKLNDGHFIPILGFGTYAPEEVPKSEALEITQLAIEVGFRHIDCAHLYQNERQVGQAIRS 67
Query: 428 KIADGTVKREELFYTTKLWATFFRPELVRPALERSLKKLRLDYVDLFIIHVPITMKPGEE 607
KIADGTVKRE++FYT+KLW+T +PELVRPALE+SLK L+LDYVDL+IIH P+ +KPGEE
Sbjct: 68 KIADGTVKREDIFYTSKLWSTCLQPELVRPALEKSLKNLQLDYVDLYIIHFPLALKPGEE 127
Query: 608 LLPKDASGKVIFDTVDLRDTWAALEKCKDAGLTKSIGVSNFNHKQLEMILNKPGLKYKPV 787
L PKD +GK+I+D+VD TW ALEKCKDAGLTKSIGVSNFNHKQLE ILNKPGLKYKPV
Sbjct: 128 LFPKDENGKIIYDSVDFCRTWEALEKCKDAGLTKSIGVSNFNHKQLEKILNKPGLKYKPV 187
Query: 788 CNQVECHPYLNQSKLLEFCKSKDIVLVAYSALGSQRNSKWVEESNPYLLEDPVLNAIAKK 967
CNQVECHPYLNQ+KLLEFCKS DIVLVAY ALGSQR WV + P LLEDPVL AIAKK
Sbjct: 188 CNQVECHPYLNQNKLLEFCKSHDIVLVAYGALGSQRLKNWVNPNYPILLEDPVLCAIAKK 247
Query: 968 HNRSPAQVALRYQLQRGVVVLAKSFNEQRIKENFQVFDFELPPEDMKTIDGLNQNLRYFK 1147
H ++PA VALRYQ+QRGVVVLAKS+N +RIKEN QV DFEL PEDMK IDGLN N+RY+
Sbjct: 248 HKQTPALVALRYQIQRGVVVLAKSYNRKRIKENMQVLDFELTPEDMKAIDGLNSNIRYYD 307
Query: 1148 LLFAVDHPYYPYSEEY 1195
L+F DHP YP SEEY
Sbjct: 308 LVFLADHPDYPLSEEY 323
>ref|XP_002692230.1| PREDICTED: aldo-keto reductase family 1, member C1-like [Bos taurus].
Length = 326
Score = 488 bits (1257), Expect = e-138
Identities = 235/316 (74%), Positives = 271/316 (85%)
Frame = +2
Query: 248 VKLNDGHLMPVLGLGTLVSEGVPKSKAGEATRVAIEVGYRHIDAAYVYENEEEVGSALRE 427
VKLNDGH +PVLG GT VPKS+A E T+ AIEVG+RHID+A++Y+NEE+VG A+R
Sbjct: 11 VKLNDGHFIPVLGFGTFAPPEVPKSEALEVTKFAIEVGFRHIDSAHLYQNEEQVGQAIRS 70
Query: 428 KIADGTVKREELFYTTKLWATFFRPELVRPALERSLKKLRLDYVDLFIIHVPITMKPGEE 607
KIADGTVKRE++FYT+K+W+TF RPELVRPALE+SLK L+LDYVDL+IIH P+ + PGE
Sbjct: 71 KIADGTVKREDIFYTSKVWSTFLRPELVRPALEKSLKDLQLDYVDLYIIHYPVPLVPGET 130
Query: 608 LLPKDASGKVIFDTVDLRDTWAALEKCKDAGLTKSIGVSNFNHKQLEMILNKPGLKYKPV 787
LLP D +GK IFD+VDL TW ALEKCKDAGLTKSIGVSNFNHKQLE ILNKPGLKYKPV
Sbjct: 131 LLPTDENGKPIFDSVDLCLTWEALEKCKDAGLTKSIGVSNFNHKQLEKILNKPGLKYKPV 190
Query: 788 CNQVECHPYLNQSKLLEFCKSKDIVLVAYSALGSQRNSKWVEESNPYLLEDPVLNAIAKK 967
CNQVECHPYLNQSKLLEFCKS DIVLVAY ALG+QR +W+ + P+LLEDPVL+AIAKK
Sbjct: 191 CNQVECHPYLNQSKLLEFCKSHDIVLVAYGALGAQRTLQWMNPNFPFLLEDPVLSAIAKK 250
Query: 968 HNRSPAQVALRYQLQRGVVVLAKSFNEQRIKENFQVFDFELPPEDMKTIDGLNQNLRYFK 1147
H ++PA VALRYQ+QRGVVVLAKS+N++RIKEN QVFDFEL EDMK IDGLN N+RY+
Sbjct: 251 HKQTPALVALRYQIQRGVVVLAKSYNKKRIKENIQVFDFELTLEDMKAIDGLNSNIRYYD 310
Query: 1148 LLFAVDHPYYPYSEEY 1195
VDHP YPYSEEY
Sbjct: 311 FQHVVDHPEYPYSEEY 326
>ref|XP_001250576.2| PREDICTED: aldo-keto reductase family 1, member C1 [Bos taurus].
Length = 326
Score = 488 bits (1257), Expect = e-138
Identities = 235/316 (74%), Positives = 271/316 (85%)
Frame = +2
Query: 248 VKLNDGHLMPVLGLGTLVSEGVPKSKAGEATRVAIEVGYRHIDAAYVYENEEEVGSALRE 427
VKLNDGH +PVLG GT VPKS+A E T+ AIEVG+RHID+A++Y+NEE+VG A+R
Sbjct: 11 VKLNDGHFIPVLGFGTFAPPEVPKSEALEVTKFAIEVGFRHIDSAHLYQNEEQVGQAIRS 70
Query: 428 KIADGTVKREELFYTTKLWATFFRPELVRPALERSLKKLRLDYVDLFIIHVPITMKPGEE 607
KIADGTVKRE++FYT+K+W+TF RPELVRPALE+SLK L+LDYVDL+IIH P+ + PGE
Sbjct: 71 KIADGTVKREDIFYTSKVWSTFLRPELVRPALEKSLKDLQLDYVDLYIIHYPVPLVPGET 130
Query: 608 LLPKDASGKVIFDTVDLRDTWAALEKCKDAGLTKSIGVSNFNHKQLEMILNKPGLKYKPV 787
LLP D +GK IFD+VDL TW ALEKCKDAGLTKSIGVSNFNHKQLE ILNKPGLKYKPV
Sbjct: 131 LLPTDENGKPIFDSVDLCLTWEALEKCKDAGLTKSIGVSNFNHKQLEKILNKPGLKYKPV 190
Query: 788 CNQVECHPYLNQSKLLEFCKSKDIVLVAYSALGSQRNSKWVEESNPYLLEDPVLNAIAKK 967
CNQVECHPYLNQSKLLEFCKS DIVLVAY ALG+QR +W+ + P+LLEDPVL+AIAKK
Sbjct: 191 CNQVECHPYLNQSKLLEFCKSHDIVLVAYGALGAQRTLQWMNPNFPFLLEDPVLSAIAKK 250
Query: 968 HNRSPAQVALRYQLQRGVVVLAKSFNEQRIKENFQVFDFELPPEDMKTIDGLNQNLRYFK 1147
H ++PA VALRYQ+QRGVVVLAKS+N++RIKEN QVFDFEL EDMK IDGLN N+RY+
Sbjct: 251 HKQTPALVALRYQIQRGVVVLAKSYNKKRIKENIQVFDFELTLEDMKAIDGLNSNIRYYD 310
Query: 1148 LLFAVDHPYYPYSEEY 1195
VDHP YPYSEEY
Sbjct: 311 FQHVVDHPEYPYSEEY 326
>ref|XP_002692251.1| PREDICTED: prostaglandin F synthase 2-like [Bos taurus].
Length = 344
Score = 488 bits (1256), Expect = e-138
Identities = 234/319 (73%), Positives = 274/319 (85%)
Frame = +2
Query: 239 SRCVKLNDGHLMPVLGLGTLVSEGVPKSKAGEATRVAIEVGYRHIDAAYVYENEEEVGSA 418
S+ VKLNDGH +PVL GT VPKS+A E TR AIEVG+RHID+A+ Y NEE+VG A
Sbjct: 26 SQKVKLNDGHFIPVLVYGTCAPPEVPKSEALEVTRFAIEVGFRHIDSAHAYRNEEQVGQA 85
Query: 419 LREKIADGTVKREELFYTTKLWATFFRPELVRPALERSLKKLRLDYVDLFIIHVPITMKP 598
+R KIADGTVKRE++FYT+KLW+T +PELV+ ALE+SLK L+LDYVDL++IH P+ +KP
Sbjct: 86 IRSKIADGTVKREDIFYTSKLWSTSLQPELVQSALEKSLKSLQLDYVDLYLIHTPVPLKP 145
Query: 599 GEELLPKDASGKVIFDTVDLRDTWAALEKCKDAGLTKSIGVSNFNHKQLEMILNKPGLKY 778
GEE+LP GK+I D+VDLR TW ALEKCKDAGLTKSIGVSNFNHKQLE ILNKPGLKY
Sbjct: 146 GEEILPTGEDGKLILDSVDLRHTWEALEKCKDAGLTKSIGVSNFNHKQLEKILNKPGLKY 205
Query: 779 KPVCNQVECHPYLNQSKLLEFCKSKDIVLVAYSALGSQRNSKWVEESNPYLLEDPVLNAI 958
KPVCNQVECHPYLNQSKLLEFCKS DIVLVAY ALG+QR+SKWV + P LLEDPVL AI
Sbjct: 206 KPVCNQVECHPYLNQSKLLEFCKSHDIVLVAYGALGAQRSSKWVNPNYPILLEDPVLCAI 265
Query: 959 AKKHNRSPAQVALRYQLQRGVVVLAKSFNEQRIKENFQVFDFELPPEDMKTIDGLNQNLR 1138
AKKH ++PA VALRYQ+QRGVVVLAKS+N++RI+EN QVFDFEL PEDM+TIDG+N+N+R
Sbjct: 266 AKKHKQTPALVALRYQIQRGVVVLAKSYNKKRIRENIQVFDFELTPEDMETIDGINRNMR 325
Query: 1139 YFKLLFAVDHPYYPYSEEY 1195
Y++ L +DHP YPYSEEY
Sbjct: 326 YYEFLPVIDHPEYPYSEEY 344
>ref|NP_001033673.1| aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid
dehydrogenase, type II) [Bos taurus].
Length = 323
Score = 486 bits (1252), Expect = e-137
Identities = 237/316 (75%), Positives = 268/316 (84%)
Frame = +2
Query: 248 VKLNDGHLMPVLGLGTLVSEGVPKSKAGEATRVAIEVGYRHIDAAYVYENEEEVGSALRE 427
VKLNDGH +PVLG GT ++ VPKS+A E T+ AIEVG+ HID A+VY+NEE VG A+R
Sbjct: 8 VKLNDGHFIPVLGFGTAEAKEVPKSEALEVTKFAIEVGFSHIDCAHVYQNEEHVGQAIRS 67
Query: 428 KIADGTVKREELFYTTKLWATFFRPELVRPALERSLKKLRLDYVDLFIIHVPITMKPGEE 607
KIADGTVKRE++FYT+KLW TF RPELVRPALE+SLK L LDYVDL+IIH P+ MKPGEE
Sbjct: 68 KIADGTVKREDIFYTSKLWCTFLRPELVRPALEKSLKNLHLDYVDLYIIHFPLAMKPGEE 127
Query: 608 LLPKDASGKVIFDTVDLRDTWAALEKCKDAGLTKSIGVSNFNHKQLEMILNKPGLKYKPV 787
LLPKD +GK+I D+VDL TW ALEKCKDAGL KSIGVSNFNHKQLE ILNKPGLKYKPV
Sbjct: 128 LLPKDENGKLIGDSVDLCHTWEALEKCKDAGLAKSIGVSNFNHKQLEKILNKPGLKYKPV 187
Query: 788 CNQVECHPYLNQSKLLEFCKSKDIVLVAYSALGSQRNSKWVEESNPYLLEDPVLNAIAKK 967
CNQVECHPYLNQSKLL+FCKS DIVLVAY ALGSQR +WV + P LLED VL AIAKK
Sbjct: 188 CNQVECHPYLNQSKLLDFCKSHDIVLVAYGALGSQRVKEWVSLNLPVLLEDSVLCAIAKK 247
Query: 968 HNRSPAQVALRYQLQRGVVVLAKSFNEQRIKENFQVFDFELPPEDMKTIDGLNQNLRYFK 1147
H ++PA V LRYQ+QRGVVVLAKS+N++RIKEN QVFDFEL PEDMK IDGLN+N RY++
Sbjct: 248 HKQTPALVVLRYQIQRGVVVLAKSYNKKRIKENIQVFDFELTPEDMKAIDGLNKNKRYYE 307
Query: 1148 LLFAVDHPYYPYSEEY 1195
L V HP YP+SEEY
Sbjct: 308 FLVGVGHPEYPFSEEY 323
>ref|NP_851370.1| dihydrodiol dehydrogenase 3 [Bos taurus].
Length = 323
Score = 485 bits (1249), Expect = e-137
Identities = 233/316 (73%), Positives = 268/316 (84%)
Frame = +2
Query: 248 VKLNDGHLMPVLGLGTLVSEGVPKSKAGEATRVAIEVGYRHIDAAYVYENEEEVGSALRE 427
VKLNDGH +PVLG GT VPKS+A E T+ AIE G+RHID+A++Y+NEE+VG A+R
Sbjct: 8 VKLNDGHFIPVLGFGTFAPREVPKSEALEVTKFAIEAGFRHIDSAHLYQNEEQVGQAIRS 67
Query: 428 KIADGTVKREELFYTTKLWATFFRPELVRPALERSLKKLRLDYVDLFIIHVPITMKPGEE 607
KIADGTVKRE++FYT+KLW+T RPELVRPALE+SL L+LDYVDL+IIH P+ +KPGE
Sbjct: 68 KIADGTVKREDIFYTSKLWSTSLRPELVRPALEKSLNNLQLDYVDLYIIHFPVALKPGET 127
Query: 608 LLPKDASGKVIFDTVDLRDTWAALEKCKDAGLTKSIGVSNFNHKQLEMILNKPGLKYKPV 787
L P D +GK IFD+VDL TW ALEKCKDAGLTKSIGVSNFNHKQLE ILNKPGLKYKPV
Sbjct: 128 LFPTDENGKPIFDSVDLCRTWEALEKCKDAGLTKSIGVSNFNHKQLEKILNKPGLKYKPV 187
Query: 788 CNQVECHPYLNQSKLLEFCKSKDIVLVAYSALGSQRNSKWVEESNPYLLEDPVLNAIAKK 967
CNQVECHPY NQSKLL+FCKS DIVLVAY ALGSQR +WV + P+LLEDPVL+AIAKK
Sbjct: 188 CNQVECHPYFNQSKLLDFCKSHDIVLVAYGALGSQRLKEWVNPNLPFLLEDPVLSAIAKK 247
Query: 968 HNRSPAQVALRYQLQRGVVVLAKSFNEQRIKENFQVFDFELPPEDMKTIDGLNQNLRYFK 1147
H ++PA VALRYQ+QRGVVVLAKS+N++RIKEN QVFDFEL PEDMK IDGLN N+RY +
Sbjct: 248 HRQTPALVALRYQIQRGVVVLAKSYNKKRIKENIQVFDFELTPEDMKAIDGLNSNMRYNE 307
Query: 1148 LLFAVDHPYYPYSEEY 1195
LL V HP YP+ EEY
Sbjct: 308 LLLGVGHPEYPFVEEY 323
>ref|NP_001030444.1| aldo-keto reductase family 1 member C3 -like [Bos taurus].
Length = 323
Score = 483 bits (1244), Expect = e-136
Identities = 233/319 (73%), Positives = 269/319 (84%)
Frame = +2
Query: 239 SRCVKLNDGHLMPVLGLGTLVSEGVPKSKAGEATRVAIEVGYRHIDAAYVYENEEEVGSA 418
S+ VKLNDGH +P LG GT VPKS+A E T+ AIE G+RHID+AY Y+NEE+VG
Sbjct: 5 SQRVKLNDGHFIPALGFGTGAPPEVPKSEAVEVTKFAIEAGFRHIDSAYTYQNEEQVGQT 64
Query: 419 LREKIADGTVKREELFYTTKLWATFFRPELVRPALERSLKKLRLDYVDLFIIHVPITMKP 598
+R KIADGTVKRE++FYT+K+W+TF RPELVRPALE+SLK L+LDYVDL+IIH P+ + P
Sbjct: 65 IRSKIADGTVKREDIFYTSKVWSTFLRPELVRPALEKSLKDLQLDYVDLYIIHQPVALMP 124
Query: 599 GEELLPKDASGKVIFDTVDLRDTWAALEKCKDAGLTKSIGVSNFNHKQLEMILNKPGLKY 778
GE L P D +GK +FD+VDL TW ALEKCKDAGLTKSIGVSNFNHKQLE ILNKPGLKY
Sbjct: 125 GETLFPTDENGKPMFDSVDLCRTWEALEKCKDAGLTKSIGVSNFNHKQLEKILNKPGLKY 184
Query: 779 KPVCNQVECHPYLNQSKLLEFCKSKDIVLVAYSALGSQRNSKWVEESNPYLLEDPVLNAI 958
KPVCNQVECHPYLNQSKLLEFCKS +IVLVAY ALG+QR +WV + P+LLEDPVL+AI
Sbjct: 185 KPVCNQVECHPYLNQSKLLEFCKSHNIVLVAYGALGAQRTLQWVNPNLPFLLEDPVLSAI 244
Query: 959 AKKHNRSPAQVALRYQLQRGVVVLAKSFNEQRIKENFQVFDFELPPEDMKTIDGLNQNLR 1138
AKKH ++PA VALRYQ+QRGVVVLAKS+N++RIKEN QVFDFEL EDMK IDGLN N+R
Sbjct: 245 AKKHKQTPALVALRYQIQRGVVVLAKSYNKKRIKENIQVFDFELTLEDMKAIDGLNSNIR 304
Query: 1139 YFKLLFAVDHPYYPYSEEY 1195
Y+ AVDHP YPYSEEY
Sbjct: 305 YYDFQQAVDHPEYPYSEEY 323
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 51,524,144
Number of extensions: 1395196
Number of successful extensions: 4518
Number of sequences better than 1.0e-05: 28
Number of HSP's gapped: 4498
Number of HSP's successfully gapped: 29
Length of query: 443
Length of database: 17,681,374
Length adjustment: 105
Effective length of query: 338
Effective length of database: 14,207,134
Effective search space: 4802011292
Effective search space used: 4802011292
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002112
(1329 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001012344.1| aldo-keto reductase family 1 member C21 [Can... 442 e-124
Alignment gi|XP_853331.1| PREDICTED: similar to 3-oxo-5-beta-steroid 4-de... 377 e-104
Alignment gi|XP_539827.2| PREDICTED: similar to 3-oxo-5-beta-steroid 4-de... 375 e-104
Alignment gi|XP_539451.1| PREDICTED: similar to Aldose reductase (AR) (Al... 327 1e-89
Alignment gi|XP_848401.1| PREDICTED: similar to Aldose reductase (AR) (Al... 327 1e-89
Alignment gi|XP_862563.1| PREDICTED: similar to Aldose reductase (AR) (Al... 295 9e-80
Alignment gi|XP_862630.1| PREDICTED: similar to Aldose reductase (AR) (Al... 276 3e-74
Alignment gi|XP_851036.1| PREDICTED: similar to aldo-keto reductase famil... 275 5e-74
Alignment gi|XP_853157.1| PREDICTED: similar to Alcohol dehydrogenase [NA... 270 2e-72
Alignment gi|XP_532598.2| PREDICTED: similar to Alcohol dehydrogenase [NA... 269 4e-72
>ref|NP_001012344.1| aldo-keto reductase family 1 member C21 [Canis lupus familiaris].
Length = 324
Score = 442 bits (1138), Expect = e-124
Identities = 211/317 (66%), Positives = 252/317 (79%)
Frame = +2
Query: 242 RCVKLNDGHLMPVLGLGTLVSEGVPKSKAGEATRVAIEVGYRHIDAAYVYENEEEVGSAL 421
R VKLNDG MP LG GT VPK++ EA + AI+VGYRH D+AY+Y NEEE+G A+
Sbjct: 7 RSVKLNDGLSMPPLGFGTSAPSKVPKTEVEEAVKRAIDVGYRHFDSAYMYLNEEEIGRAI 66
Query: 422 REKIADGTVKREELFYTTKLWATFFRPELVRPALERSLKKLRLDYVDLFIIHVPITMKPG 601
+ KIADGTVKRE++FYT+K+W TF RPELV+ LE SLKKL YVDL++IH P+ +KPG
Sbjct: 67 QRKIADGTVKREDIFYTSKVWVTFLRPELVQTNLEMSLKKLGFSYVDLYLIHFPVPLKPG 126
Query: 602 EELLPKDASGKVIFDTVDLRDTWAALEKCKDAGLTKSIGVSNFNHKQLEMILNKPGLKYK 781
EEL PKD GK+IFD VDL TW A+EKCKD+GL KSIGVSNFN +QLE IL+KP LKYK
Sbjct: 127 EELFPKDKDGKIIFDRVDLCATWEAMEKCKDSGLAKSIGVSNFNRRQLERILSKPRLKYK 186
Query: 782 PVCNQVECHPYLNQSKLLEFCKSKDIVLVAYSALGSQRNSKWVEESNPYLLEDPVLNAIA 961
PVCNQVECH Y NQSKLLEFCKSKDI+L AY ALGS +WV + P LL+DPVLNA+A
Sbjct: 187 PVCNQVECHLYFNQSKLLEFCKSKDIILTAYGALGSDFGKEWVNQDAPVLLKDPVLNAVA 246
Query: 962 KKHNRSPAQVALRYQLQRGVVVLAKSFNEQRIKENFQVFDFELPPEDMKTIDGLNQNLRY 1141
+H R+PAQVALR+QLQRGVV LAKSFNE+RI+ENFQVFDF+L PEDM+T+ LN+N+RY
Sbjct: 247 ARHGRTPAQVALRFQLQRGVVALAKSFNEKRIRENFQVFDFQLTPEDMETLSSLNKNIRY 306
Query: 1142 FKLLFAVDHPYYPYSEE 1192
F HP YP+++E
Sbjct: 307 FSDTLFATHPDYPFNDE 323
>ref|XP_853331.1| PREDICTED: similar to 3-oxo-5-beta-steroid 4-dehydrogenase
(Delta(4)-3-ketosteroid 5-beta-reductase) (Aldo-keto
reductase family 1 member D1) [Canis familiaris].
Length = 336
Score = 377 bits (967), Expect = e-104
Identities = 176/314 (56%), Positives = 241/314 (76%), Gaps = 1/314 (0%)
Frame = +2
Query: 215 GLWIKMALSRCVKLNDGHLMPVLGLGTLVSEGV-PKSKAGEATRVAIEVGYRHIDAAYVY 391
G+++ A R + L+DG+ +P++GLGT + PK ++ ++AI+ GYRHID AY+Y
Sbjct: 23 GMYLSAANHR-IPLSDGNSIPIIGLGTYSEPKLTPKGTCAKSVKIAIDTGYRHIDGAYIY 81
Query: 392 ENEEEVGSALREKIADGTVKREELFYTTKLWATFFRPELVRPALERSLKKLRLDYVDLFI 571
+NE EVG A+REKIA+G V+RE++FY KLWAT PE+VRP LE++L L+LDYVDL+I
Sbjct: 82 QNEHEVGEAIREKIAEGKVQREDIFYCGKLWATKHDPEMVRPTLEKTLSVLQLDYVDLYI 141
Query: 572 IHVPITMKPGEELLPKDASGKVIFDTVDLRDTWAALEKCKDAGLTKSIGVSNFNHKQLEM 751
I +P+ KPG+E+ PKD +GK ++ +L TW LE CKDAGL KS+GVSNFN +QLE+
Sbjct: 142 IEIPMAFKPGDEIYPKDENGKWLYHKSNLCATWEGLEACKDAGLVKSLGVSNFNRRQLEL 201
Query: 752 ILNKPGLKYKPVCNQVECHPYLNQSKLLEFCKSKDIVLVAYSALGSQRNSKWVEESNPYL 931
ILNKPGLK+KPV NQVECHPY Q KLL+FC+ +DIV++AYS LG+ RN WV S+P L
Sbjct: 202 ILNKPGLKHKPVSNQVECHPYFTQPKLLKFCQQRDIVIIAYSPLGTSRNPTWVNISSPPL 261
Query: 932 LEDPVLNAIAKKHNRSPAQVALRYQLQRGVVVLAKSFNEQRIKENFQVFDFELPPEDMKT 1111
L+D +LNA+ KK+ ++ AQ+ LR+ +QRGVVV+ KSFN +RIKENFQ+FDF L E+MK
Sbjct: 262 LKDELLNALGKKYKKTAAQIVLRFNIQRGVVVIPKSFNPERIKENFQIFDFSLTEEEMKD 321
Query: 1112 IDGLNQNLRYFKLL 1153
I+ LN+N+R+ ++L
Sbjct: 322 IEALNKNVRFVEML 335
>ref|XP_539827.2| PREDICTED: similar to 3-oxo-5-beta-steroid 4-dehydrogenase
(Delta(4)-3-ketosteroid 5-beta-reductase) (Aldo-keto
reductase family 1 member D1) [Canis familiaris].
Length = 341
Score = 375 bits (964), Expect = e-104
Identities = 175/308 (56%), Positives = 237/308 (76%), Gaps = 1/308 (0%)
Frame = +2
Query: 233 ALSRCVKLNDGHLMPVLGLGTLVSEGV-PKSKAGEATRVAIEVGYRHIDAAYVYENEEEV 409
A + + L+DG+ +P++GLGT + PK ++ ++AI+ GYRHID AY+Y+NE EV
Sbjct: 33 AANHRIPLSDGNSIPIIGLGTYSEPKLTPKGTCTKSVKIAIDTGYRHIDGAYIYQNEHEV 92
Query: 410 GSALREKIADGTVKREELFYTTKLWATFFRPELVRPALERSLKKLRLDYVDLFIIHVPIT 589
G A+REKIA+G V+RE++FY KLWAT PE+VRP LE++L L+LDYVDL+II +P+
Sbjct: 93 GEAIREKIAEGKVRREDIFYCGKLWATKHDPEMVRPTLEKTLSVLQLDYVDLYIIEIPMA 152
Query: 590 MKPGEELLPKDASGKVIFDTVDLRDTWAALEKCKDAGLTKSIGVSNFNHKQLEMILNKPG 769
KPG+E+ PKD +GK ++ +L TW ALE CKDAGL KS+GVSNFN +QLE+ILNKPG
Sbjct: 153 FKPGDEIYPKDENGKWLYHKSNLCATWEALEACKDAGLVKSLGVSNFNRRQLELILNKPG 212
Query: 770 LKYKPVCNQVECHPYLNQSKLLEFCKSKDIVLVAYSALGSQRNSKWVEESNPYLLEDPVL 949
LK+KPV NQVECHPY Q KLL+FC+ DIV++AYS LG+ RN WV S+P LL+D +L
Sbjct: 213 LKHKPVSNQVECHPYFTQPKLLKFCQQHDIVIIAYSPLGTSRNPTWVNISSPPLLKDELL 272
Query: 950 NAIAKKHNRSPAQVALRYQLQRGVVVLAKSFNEQRIKENFQVFDFELPPEDMKTIDGLNQ 1129
NA+ KK+ ++ AQ+ LR+ +QRGVVV+ KSFN +RIKENFQ+FDF L E+MK I+ LN+
Sbjct: 273 NALGKKYKKTAAQIVLRFNIQRGVVVIPKSFNPERIKENFQIFDFSLTEEEMKDIEALNK 332
Query: 1130 NLRYFKLL 1153
N+R+ ++L
Sbjct: 333 NVRFVEML 340
>ref|XP_539451.1| PREDICTED: similar to Aldose reductase (AR) (Aldehyde reductase)
isoform 1 [Canis familiaris].
Length = 316
Score = 327 bits (839), Expect = 1e-89
Identities = 162/314 (51%), Positives = 215/314 (68%)
Frame = +2
Query: 254 LNDGHLMPVLGLGTLVSEGVPKSKAGEATRVAIEVGYRHIDAAYVYENEEEVGSALREKI 433
L +G MPVLGLGT S P K +A +VAI++GYRHID A+VY+NE EVG A++EK+
Sbjct: 7 LCNGAKMPVLGLGTWKS---PPGKVTDAVKVAIDLGYRHIDCAHVYQNENEVGLAIQEKL 63
Query: 434 ADGTVKREELFYTTKLWATFFRPELVRPALERSLKKLRLDYVDLFIIHVPITMKPGEELL 613
+ VKRE+LF +KLW T+ +V+ A +++L L+LDY+DL++IH P K G+E
Sbjct: 64 KEQVVKREDLFVVSKLWCTYHEKSMVKGACQKTLSDLKLDYLDLYLIHWPTGFKAGKEYF 123
Query: 614 PKDASGKVIFDTVDLRDTWAALEKCKDAGLTKSIGVSNFNHKQLEMILNKPGLKYKPVCN 793
P D G VI DTW A+E+ D GL K+IGVSNFNH Q+E ILNKPGLKYKP N
Sbjct: 124 PLDGEGNVIPSDTSFVDTWEAMEQLVDEGLVKAIGVSNFNHLQIEKILNKPGLKYKPAVN 183
Query: 794 QVECHPYLNQSKLLEFCKSKDIVLVAYSALGSQRNSKWVEESNPYLLEDPVLNAIAKKHN 973
Q+ECHPYL Q KL+++C++K IV+ AYS LGS + W + +P LLEDP + AIA KHN
Sbjct: 184 QIECHPYLTQEKLIQYCQAKGIVVTAYSPLGSP-DRPWAKPEDPSLLEDPRIKAIAAKHN 242
Query: 974 RSPAQVALRYQLQRGVVVLAKSFNEQRIKENFQVFDFELPPEDMKTIDGLNQNLRYFKLL 1153
++ AQV +R+ +QR +VV+ KS +RI ENFQVFDFEL DM T+ N+N R L+
Sbjct: 243 KTTAQVLIRFPMQRNLVVIPKSVTPERIAENFQVFDFELSSVDMTTLLSYNRNWRVCALV 302
Query: 1154 FAVDHPYYPYSEEY 1195
H YP++EE+
Sbjct: 303 SCASHKDYPFTEEF 316
>ref|XP_848401.1| PREDICTED: similar to Aldose reductase (AR) (Aldehyde reductase)
isoform 1 [Canis familiaris].
Length = 316
Score = 327 bits (839), Expect = 1e-89
Identities = 162/314 (51%), Positives = 215/314 (68%)
Frame = +2
Query: 254 LNDGHLMPVLGLGTLVSEGVPKSKAGEATRVAIEVGYRHIDAAYVYENEEEVGSALREKI 433
L +G MPVLGLGT S P K +A +VAI++GYRHID A+VY+NE EVG A++EK+
Sbjct: 7 LCNGAKMPVLGLGTWKS---PPGKVTDAVKVAIDLGYRHIDCAHVYQNENEVGLAIQEKL 63
Query: 434 ADGTVKREELFYTTKLWATFFRPELVRPALERSLKKLRLDYVDLFIIHVPITMKPGEELL 613
+ VKRE+LF +KLW T+ +V+ A +++L L+LDY+DL++IH P K G+E
Sbjct: 64 KEQVVKREDLFVVSKLWCTYHEKSMVKGACQKTLSDLKLDYLDLYLIHWPTGFKAGKEYF 123
Query: 614 PKDASGKVIFDTVDLRDTWAALEKCKDAGLTKSIGVSNFNHKQLEMILNKPGLKYKPVCN 793
P D G VI DTW A+E+ D GL K+IGVSNFNH Q+E ILNKPGLKYKP N
Sbjct: 124 PLDGEGNVIPSDTSFVDTWEAMEQLVDEGLVKAIGVSNFNHLQIEKILNKPGLKYKPAVN 183
Query: 794 QVECHPYLNQSKLLEFCKSKDIVLVAYSALGSQRNSKWVEESNPYLLEDPVLNAIAKKHN 973
Q+ECHPYL Q KL+++C++K IV+ AYS LGS + W + +P LLEDP + AIA KHN
Sbjct: 184 QIECHPYLTQEKLIQYCQAKGIVVTAYSPLGSP-DRPWAKPEDPSLLEDPRIKAIAAKHN 242
Query: 974 RSPAQVALRYQLQRGVVVLAKSFNEQRIKENFQVFDFELPPEDMKTIDGLNQNLRYFKLL 1153
++ AQV +R+ +QR +VV+ KS +RI ENFQVFDFEL DM T+ N+N R L+
Sbjct: 243 KTTAQVLIRFPMQRNLVVIPKSVTPERIAENFQVFDFELSSVDMTTLLSYNRNWRVCALV 302
Query: 1154 FAVDHPYYPYSEEY 1195
H YP++EE+
Sbjct: 303 SCASHKDYPFTEEF 316
>ref|XP_862563.1| PREDICTED: similar to Aldose reductase (AR) (Aldehyde reductase)
isoform 2 [Canis familiaris].
Length = 290
Score = 295 bits (754), Expect = 9e-80
Identities = 152/314 (48%), Positives = 204/314 (64%)
Frame = +2
Query: 254 LNDGHLMPVLGLGTLVSEGVPKSKAGEATRVAIEVGYRHIDAAYVYENEEEVGSALREKI 433
L +G MPVLGLGT S P K +A +VAI++GYRHID A+VY+NE EVG A++EK+
Sbjct: 7 LCNGAKMPVLGLGTWKS---PPGKVTDAVKVAIDLGYRHIDCAHVYQNENEVGLAIQEKL 63
Query: 434 ADGTVKREELFYTTKLWATFFRPELVRPALERSLKKLRLDYVDLFIIHVPITMKPGEELL 613
+ VKRE+LF +KLW T+ +V+ A +++L L+LDY+DL++IH P K
Sbjct: 64 KEQVVKREDLFVVSKLWCTYHEKSMVKGACQKTLSDLKLDYLDLYLIHWPTGFK------ 117
Query: 614 PKDASGKVIFDTVDLRDTWAALEKCKDAGLTKSIGVSNFNHKQLEMILNKPGLKYKPVCN 793
A+E+ D GL K+IGVSNFNH Q+E ILNKPGLKYKP N
Sbjct: 118 --------------------AMEQLVDEGLVKAIGVSNFNHLQIEKILNKPGLKYKPAVN 157
Query: 794 QVECHPYLNQSKLLEFCKSKDIVLVAYSALGSQRNSKWVEESNPYLLEDPVLNAIAKKHN 973
Q+ECHPYL Q KL+++C++K IV+ AYS LGS + W + +P LLEDP + AIA KHN
Sbjct: 158 QIECHPYLTQEKLIQYCQAKGIVVTAYSPLGSP-DRPWAKPEDPSLLEDPRIKAIAAKHN 216
Query: 974 RSPAQVALRYQLQRGVVVLAKSFNEQRIKENFQVFDFELPPEDMKTIDGLNQNLRYFKLL 1153
++ AQV +R+ +QR +VV+ KS +RI ENFQVFDFEL DM T+ N+N R L+
Sbjct: 217 KTTAQVLIRFPMQRNLVVIPKSVTPERIAENFQVFDFELSSVDMTTLLSYNRNWRVCALV 276
Query: 1154 FAVDHPYYPYSEEY 1195
H YP++EE+
Sbjct: 277 SCASHKDYPFTEEF 290
>ref|XP_862630.1| PREDICTED: similar to Aldose reductase (AR) (Aldehyde reductase)
isoform 5 [Canis familiaris].
Length = 277
Score = 276 bits (706), Expect = 3e-74
Identities = 133/264 (50%), Positives = 180/264 (68%)
Frame = +2
Query: 404 EVGSALREKIADGTVKREELFYTTKLWATFFRPELVRPALERSLKKLRLDYVDLFIIHVP 583
+VG A++EK+ + VKRE+LF +KLW T+ +V+ A +++L L+LDY+DL++IH P
Sbjct: 15 KVGLAIQEKLKEQVVKREDLFVVSKLWCTYHEKSMVKGACQKTLSDLKLDYLDLYLIHWP 74
Query: 584 ITMKPGEELLPKDASGKVIFDTVDLRDTWAALEKCKDAGLTKSIGVSNFNHKQLEMILNK 763
K G+E P D G VI DTW A+E+ D GL K+IGVSNFNH Q+E ILNK
Sbjct: 75 TGFKAGKEYFPLDGEGNVIPSDTSFVDTWEAMEQLVDEGLVKAIGVSNFNHLQIEKILNK 134
Query: 764 PGLKYKPVCNQVECHPYLNQSKLLEFCKSKDIVLVAYSALGSQRNSKWVEESNPYLLEDP 943
PGLKYKP NQ+ECHPYL Q KL+++C++K IV+ AYS LGS + W + +P LLEDP
Sbjct: 135 PGLKYKPAVNQIECHPYLTQEKLIQYCQAKGIVVTAYSPLGSP-DRPWAKPEDPSLLEDP 193
Query: 944 VLNAIAKKHNRSPAQVALRYQLQRGVVVLAKSFNEQRIKENFQVFDFELPPEDMKTIDGL 1123
+ AIA KHN++ AQV +R+ +QR +VV+ KS +RI ENFQVFDFEL DM T+
Sbjct: 194 RIKAIAAKHNKTTAQVLIRFPMQRNLVVIPKSVTPERIAENFQVFDFELSSVDMTTLLSY 253
Query: 1124 NQNLRYFKLLFAVDHPYYPYSEEY 1195
N+N R L+ H YP++EE+
Sbjct: 254 NRNWRVCALVSCASHKDYPFTEEF 277
>ref|XP_851036.1| PREDICTED: similar to aldo-keto reductase family 1, member E1 [Canis
familiaris].
Length = 436
Score = 275 bits (704), Expect = 5e-74
Identities = 139/303 (45%), Positives = 192/303 (63%)
Frame = +2
Query: 272 MPVLGLGTLVSEGVPKSKAGEATRVAIEVGYRHIDAAYVYENEEEVGSALREKIADGTVK 451
+P +GLGT + + EA +VAI+ GYRH D AY+Y NE EVG+ + KI +G V+
Sbjct: 4 IPAVGLGTWKAA---PGEVAEAVKVAIDAGYRHFDCAYLYHNESEVGAGIHSKITEGVVR 60
Query: 452 REELFYTTKLWATFFRPELVRPALERSLKKLRLDYVDLFIIHVPITMKPGEELLPKDASG 631
RE+LF +KLW T + LV+ A RSL L LDY+DL+++H P+ K GEE +P D SG
Sbjct: 61 REDLFIVSKLWCTSHKKSLVKAACTRSLTALNLDYLDLYLMHWPMGFKSGEEDVPLDRSG 120
Query: 632 KVIFDTVDLRDTWAALEKCKDAGLTKSIGVSNFNHKQLEMILNKPGLKYKPVCNQVECHP 811
VI D DTW A+E GL K+IGVSNFNHKQL+ +LNKP L++KP+ NQ+ECHP
Sbjct: 121 MVIASDTDFLDTWEAMEDLVVMGLVKAIGVSNFNHKQLDRLLNKPNLRFKPITNQIECHP 180
Query: 812 YLNQSKLLEFCKSKDIVLVAYSALGSQRNSKWVEESNPYLLEDPVLNAIAKKHNRSPAQV 991
YL Q +L+ FC+S+ + + AY LG R W + LL+DPV+ +A+KHN+SPAQ+
Sbjct: 181 YLTQKELIGFCQSRQVSVTAYRPLGGSR-LVWAPDEGVDLLDDPVIQRVAQKHNKSPAQI 239
Query: 992 ALRYQLQRGVVVLAKSFNEQRIKENFQVFDFELPPEDMKTIDGLNQNLRYFKLLFAVDHP 1171
LR+Q+QR V+V+ KS +RI EN Q + L+Q + Y + + AV P
Sbjct: 240 LLRFQIQRNVIVIPKSVTPKRIIENIQEMG------KLCCTPSLSQGVPYSQGVSAVPPP 293
Query: 1172 YYP 1180
+P
Sbjct: 294 DFP 296
>ref|XP_853157.1| PREDICTED: similar to Alcohol dehydrogenase [NADP+] (Aldehyde
reductase) (Aldo-keto reductase family 1 member A1)
[Canis familiaris].
Length = 325
Score = 270 bits (691), Expect = 2e-72
Identities = 138/327 (42%), Positives = 206/327 (62%), Gaps = 10/327 (3%)
Frame = +2
Query: 245 CVKLNDGHLMPVLGLGTLVSEGVPKSKAGEATRVAIEVGYRHIDAAYVYENEEEVGSALR 424
CV L+ G MP++GLGT S+ + A A+ VGYRHID A +Y NE E+G AL+
Sbjct: 5 CVLLHTGQKMPLIGLGTWKSD---PGQVKAAIMYALSVGYRHIDCAAIYGNEAEIGEALK 61
Query: 425 EKIADG-TVKREELFYTTKLWATFFRPELVRPALERSLKKLRLDYVDLFIIHVPITMKPG 601
E + G V REELF T+KLW T P+ V PAL ++L L+L+Y+DL+++H P + G
Sbjct: 62 ENVGPGKVVLREELFVTSKLWNTKHHPKDVEPALRKTLADLQLEYLDLYLMHWPYAFERG 121
Query: 602 EELLPKDASGKVIFDTVDLRDTWAALEKCKDAGLTKSIGVSNFNHKQLEMILNKPGLKYK 781
+ PK+A G + +D+ ++TW ALE GL +++G+SNF+ +Q++ +L+ + +
Sbjct: 122 DNPFPKNADGTIRYDSTHYKETWKALEALVAKGLVRALGLSNFSSRQIDDVLSVASV--R 179
Query: 782 PVCNQVECHPYLNQSKLLEFCKSKDIVLVAYSALGSQRNSKWVEESNPYLLEDPVLNAIA 961
P QVECHPYL Q +L+ C+++ + + AYS LGS + W + P LLE+PV+ A+A
Sbjct: 180 PAVLQVECHPYLAQKELIAHCQARGLEVTAYSPLGSS-DRAWRDPDEPVLLEEPVVLALA 238
Query: 962 KKHNRSPAQVALRYQLQRGVVVLAKSFNEQRIKENFQVFDFELPPEDMKTIDGLNQNLRY 1141
+K+ RSPAQ+ LR+Q+QR V+ + KS RI +N QVFDF P++MK +D LN+N RY
Sbjct: 239 EKYGRSPAQILLRWQVQRKVICIPKSITPSRILQNIQVFDFTFSPDEMKQLDALNKNWRY 298
Query: 1142 FKLLFAVD---------HPYYPYSEEY 1195
+ VD HP YP+++ Y
Sbjct: 299 IVPMLTVDGKRVPRDAGHPLYPFNDPY 325
>ref|XP_532598.2| PREDICTED: similar to Alcohol dehydrogenase [NADP+] (Aldehyde
reductase) (Aldo-keto reductase family 1 member A1)
[Canis familiaris].
Length = 325
Score = 269 bits (688), Expect = 4e-72
Identities = 138/327 (42%), Positives = 206/327 (62%), Gaps = 10/327 (3%)
Frame = +2
Query: 245 CVKLNDGHLMPVLGLGTLVSEGVPKSKAGEATRVAIEVGYRHIDAAYVYENEEEVGSALR 424
CV L+ G MP++GLGT S+ + A A+ VGYRHID A +Y NE E+G AL+
Sbjct: 5 CVLLHTGQKMPLIGLGTWKSD---PGQVKAAIMYALSVGYRHIDCAAIYGNEAEIGEALK 61
Query: 425 EKIADG-TVKREELFYTTKLWATFFRPELVRPALERSLKKLRLDYVDLFIIHVPITMKPG 601
E + G V REELF T+KLW T P+ V PAL ++L L+L+Y+DL+++H P + G
Sbjct: 62 ENVGPGKVVLREELFVTSKLWNTKHHPKDVEPALRKTLADLQLEYLDLYLMHWPYAFERG 121
Query: 602 EELLPKDASGKVIFDTVDLRDTWAALEKCKDAGLTKSIGVSNFNHKQLEMILNKPGLKYK 781
+ PK+A G V +D+ ++TW ALE GL +++G+SNF+ +Q++ +L+ + +
Sbjct: 122 DNPFPKNADGTVRYDSTHYKETWKALEALVAKGLVRALGLSNFSSRQIDDVLSVASV--R 179
Query: 782 PVCNQVECHPYLNQSKLLEFCKSKDIVLVAYSALGSQRNSKWVEESNPYLLEDPVLNAIA 961
P QVECHPYL Q +L+ C+++ + + AYS LGS + W + P LLE+PV+ A+A
Sbjct: 180 PAVLQVECHPYLAQKELIAHCQARGLEVTAYSPLGSS-DRAWRDPDEPVLLEEPVVLALA 238
Query: 962 KKHNRSPAQVALRYQLQRGVVVLAKSFNEQRIKENFQVFDFELPPEDMKTIDGLNQNLRY 1141
+K+ RSPAQ+ LR+Q+QR V+ + KS RI +N QVFDF P++MK +D LN+N +Y
Sbjct: 239 EKYGRSPAQILLRWQVQRKVICIPKSITPSRILQNIQVFDFTFSPDEMKQLDALNKNWQY 298
Query: 1142 FKLLFAVD---------HPYYPYSEEY 1195
+ VD HP YP+++ Y
Sbjct: 299 IVPMLTVDGKRVPRDAGHPLYPFNDPY 325
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 53,912,818
Number of extensions: 1441799
Number of successful extensions: 4636
Number of sequences better than 1.0e-05: 16
Number of HSP's gapped: 4611
Number of HSP's successfully gapped: 18
Length of query: 443
Length of database: 18,874,504
Length adjustment: 106
Effective length of query: 337
Effective length of database: 15,340,888
Effective search space: 5169879256
Effective search space used: 5169879256
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002112
(1329 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_003730.4| aldo-keto reductase family 1 member C3 [Homo sa... 483 e-136
Alignment gi|NP_001809.3| aldo-keto reductase family 1 member C4 [Homo sa... 479 e-135
Alignment gi|NP_001344.2| aldo-keto reductase family 1 member C1 [Homo sa... 478 e-135
Alignment gi|NP_995317.1| aldo-keto reductase family 1 member C2 isoform ... 477 e-134
Alignment gi|NP_001345.1| aldo-keto reductase family 1 member C2 isoform ... 477 e-134
Alignment gi|NP_005980.1| 3-oxo-5-beta-steroid 4-dehydrogenase isoform 1 ... 393 e-109
Alignment gi|NP_001177836.1| 3-oxo-5-beta-steroid 4-dehydrogenase isoform... 348 8e-96
Alignment gi|NP_001619.1| aldose reductase [Homo sapiens]. 343 2e-94
Alignment gi|NP_064695.3| aldo-keto reductase family 1 member B10 [Homo s... 318 7e-87
Alignment gi|NP_001177835.1| 3-oxo-5-beta-steroid 4-dehydrogenase isoform... 307 1e-83
>ref|NP_003730.4| aldo-keto reductase family 1 member C3 [Homo sapiens].
Length = 323
Score = 483 bits (1244), Expect = e-136
Identities = 230/318 (72%), Positives = 272/318 (85%)
Frame = +2
Query: 242 RCVKLNDGHLMPVLGLGTLVSEGVPKSKAGEATRVAIEVGYRHIDAAYVYENEEEVGSAL 421
+CVKLNDGH MPVLG GT VP+SKA E T++AIE G+RHID+A++Y NEE+VG A+
Sbjct: 6 QCVKLNDGHFMPVLGFGTYAPPEVPRSKALEVTKLAIEAGFRHIDSAHLYNNEEQVGLAI 65
Query: 422 REKIADGTVKREELFYTTKLWATFFRPELVRPALERSLKKLRLDYVDLFIIHVPITMKPG 601
R KIADG+VKRE++FYT+KLW+TF RPELVRPALE SLKK +LDYVDL++IH P+++KPG
Sbjct: 66 RSKIADGSVKREDIFYTSKLWSTFHRPELVRPALENSLKKAQLDYVDLYLIHSPMSLKPG 125
Query: 602 EELLPKDASGKVIFDTVDLRDTWAALEKCKDAGLTKSIGVSNFNHKQLEMILNKPGLKYK 781
EEL P D +GKVIFD VDL TW A+EKCKDAGL KSIGVSNFN +QLEMILNKPGLKYK
Sbjct: 126 EELSPTDENGKVIFDIVDLCTTWEAMEKCKDAGLAKSIGVSNFNRRQLEMILNKPGLKYK 185
Query: 782 PVCNQVECHPYLNQSKLLEFCKSKDIVLVAYSALGSQRNSKWVEESNPYLLEDPVLNAIA 961
PVCNQVECHPY N+SKLL+FCKSKDIVLVAYSALGSQR+ +WV+ ++P LLEDPVL A+A
Sbjct: 186 PVCNQVECHPYFNRSKLLDFCKSKDIVLVAYSALGSQRDKRWVDPNSPVLLEDPVLCALA 245
Query: 962 KKHNRSPAQVALRYQLQRGVVVLAKSFNEQRIKENFQVFDFELPPEDMKTIDGLNQNLRY 1141
KKH R+PA +ALRYQLQRGVVVLAKS+NEQRI++N QVF+F+L EDMK IDGL++NL Y
Sbjct: 246 KKHKRTPALIALRYQLQRGVVVLAKSYNEQRIRQNVQVFEFQLTAEDMKAIDGLDRNLHY 305
Query: 1142 FKLLFAVDHPYYPYSEEY 1195
F HP YPYS+EY
Sbjct: 306 FNSDSFASHPNYPYSDEY 323
>ref|NP_001809.3| aldo-keto reductase family 1 member C4 [Homo sapiens].
Length = 323
Score = 479 bits (1233), Expect = e-135
Identities = 225/316 (71%), Positives = 273/316 (86%)
Frame = +2
Query: 248 VKLNDGHLMPVLGLGTLVSEGVPKSKAGEATRVAIEVGYRHIDAAYVYENEEEVGSALRE 427
V+LNDGH MPVLG GT VP+++A E T++AIE G+RHID+AY+Y NEE+VG A+R
Sbjct: 8 VELNDGHFMPVLGFGTYAPPEVPRNRAVEVTKLAIEAGFRHIDSAYLYNNEEQVGLAIRS 67
Query: 428 KIADGTVKREELFYTTKLWATFFRPELVRPALERSLKKLRLDYVDLFIIHVPITMKPGEE 607
KIADG+VKRE++FYT+KLW TFF+P++V+PALE SLKKL+LDYVDL+++H P+ +KPGE
Sbjct: 68 KIADGSVKREDIFYTSKLWCTFFQPQMVQPALESSLKKLQLDYVDLYLLHFPMALKPGET 127
Query: 608 LLPKDASGKVIFDTVDLRDTWAALEKCKDAGLTKSIGVSNFNHKQLEMILNKPGLKYKPV 787
LPKD +GKVIFDTVDL TW +EKCKDAGL KSIGVSNFN +QLEMILNKPGLKYKPV
Sbjct: 128 PLPKDENGKVIFDTVDLSATWEVMEKCKDAGLAKSIGVSNFNCRQLEMILNKPGLKYKPV 187
Query: 788 CNQVECHPYLNQSKLLEFCKSKDIVLVAYSALGSQRNSKWVEESNPYLLEDPVLNAIAKK 967
CNQVECHPYLNQSKLL+FCKSKDIVLVA+SALG+QR+ WV+ ++P LLEDPVL A+AKK
Sbjct: 188 CNQVECHPYLNQSKLLDFCKSKDIVLVAHSALGTQRHKLWVDPNSPVLLEDPVLCALAKK 247
Query: 968 HNRSPAQVALRYQLQRGVVVLAKSFNEQRIKENFQVFDFELPPEDMKTIDGLNQNLRYFK 1147
H R+PA +ALRYQLQRGVVVLAKS+NEQRI+EN QVF+F+L EDMK +DGLN+N RY
Sbjct: 248 HKRTPALIALRYQLQRGVVVLAKSYNEQRIRENIQVFEFQLTSEDMKVLDGLNRNYRYVV 307
Query: 1148 LLFAVDHPYYPYSEEY 1195
+ F +DHP YP+S+EY
Sbjct: 308 MDFLMDHPDYPFSDEY 323
>ref|NP_001344.2| aldo-keto reductase family 1 member C1 [Homo sapiens].
Length = 323
Score = 478 bits (1231), Expect = e-135
Identities = 227/318 (71%), Positives = 270/318 (84%)
Frame = +2
Query: 242 RCVKLNDGHLMPVLGLGTLVSEGVPKSKAGEATRVAIEVGYRHIDAAYVYENEEEVGSAL 421
+CVKLNDGH MPVLG GT VPKSKA EAT++AIE G+RHID+A++Y NEE+VG A+
Sbjct: 6 QCVKLNDGHFMPVLGFGTYAPAEVPKSKALEATKLAIEAGFRHIDSAHLYNNEEQVGLAI 65
Query: 422 REKIADGTVKREELFYTTKLWATFFRPELVRPALERSLKKLRLDYVDLFIIHVPITMKPG 601
R KIADG+VKRE++FYT+KLW RPELVRPALERSLK L+LDYVDL++IH P+++KPG
Sbjct: 66 RSKIADGSVKREDIFYTSKLWCNSHRPELVRPALERSLKNLQLDYVDLYLIHFPVSVKPG 125
Query: 602 EELLPKDASGKVIFDTVDLRDTWAALEKCKDAGLTKSIGVSNFNHKQLEMILNKPGLKYK 781
EE++PKD +GK++FDTVDL TW A+EKCKDAGL KSIGVSNFN +QLEMILNKPGLKYK
Sbjct: 126 EEVIPKDENGKILFDTVDLCATWEAVEKCKDAGLAKSIGVSNFNRRQLEMILNKPGLKYK 185
Query: 782 PVCNQVECHPYLNQSKLLEFCKSKDIVLVAYSALGSQRNSKWVEESNPYLLEDPVLNAIA 961
PVCNQVECHPY NQ KLL+FCKSKDIVLVAYSALGS R WV+ ++P LLEDPVL A+A
Sbjct: 186 PVCNQVECHPYFNQRKLLDFCKSKDIVLVAYSALGSHREEPWVDPNSPVLLEDPVLCALA 245
Query: 962 KKHNRSPAQVALRYQLQRGVVVLAKSFNEQRIKENFQVFDFELPPEDMKTIDGLNQNLRY 1141
KKH R+PA +ALRYQLQRGVVVLAKS+NEQRI++N QVF+F+L E+MK IDGLN+N+RY
Sbjct: 246 KKHKRTPALIALRYQLQRGVVVLAKSYNEQRIRQNVQVFEFQLTSEEMKAIDGLNRNVRY 305
Query: 1142 FKLLFAVDHPYYPYSEEY 1195
L P YP+S+EY
Sbjct: 306 LTLDIFAGPPNYPFSDEY 323
>ref|NP_995317.1| aldo-keto reductase family 1 member C2 isoform 1 [Homo sapiens].
Length = 323
Score = 477 bits (1227), Expect = e-134
Identities = 226/318 (71%), Positives = 269/318 (84%)
Frame = +2
Query: 242 RCVKLNDGHLMPVLGLGTLVSEGVPKSKAGEATRVAIEVGYRHIDAAYVYENEEEVGSAL 421
+CVKLNDGH MPVLG GT VPKSKA EA ++AIE G+ HID+A+VY NEE+VG A+
Sbjct: 6 QCVKLNDGHFMPVLGFGTYAPAEVPKSKALEAVKLAIEAGFHHIDSAHVYNNEEQVGLAI 65
Query: 422 REKIADGTVKREELFYTTKLWATFFRPELVRPALERSLKKLRLDYVDLFIIHVPITMKPG 601
R KIADG+VKRE++FYT+KLW+ RPELVRPALERSLK L+LDYVDL++IH P+++KPG
Sbjct: 66 RSKIADGSVKREDIFYTSKLWSNSHRPELVRPALERSLKNLQLDYVDLYLIHFPVSVKPG 125
Query: 602 EELLPKDASGKVIFDTVDLRDTWAALEKCKDAGLTKSIGVSNFNHKQLEMILNKPGLKYK 781
EE++PKD +GK++FDTVDL TW A+EKCKDAGL KSIGVSNFNH+ LEMILNKPGLKYK
Sbjct: 126 EEVIPKDENGKILFDTVDLCATWEAMEKCKDAGLAKSIGVSNFNHRLLEMILNKPGLKYK 185
Query: 782 PVCNQVECHPYLNQSKLLEFCKSKDIVLVAYSALGSQRNSKWVEESNPYLLEDPVLNAIA 961
PVCNQVECHPY NQ KLL+FCKSKDIVLVAYSALGS R WV+ ++P LLEDPVL A+A
Sbjct: 186 PVCNQVECHPYFNQRKLLDFCKSKDIVLVAYSALGSHREEPWVDPNSPVLLEDPVLCALA 245
Query: 962 KKHNRSPAQVALRYQLQRGVVVLAKSFNEQRIKENFQVFDFELPPEDMKTIDGLNQNLRY 1141
KKH R+PA +ALRYQLQRGVVVLAKS+NEQRI++N QVF+F+L E+MK IDGLN+N+RY
Sbjct: 246 KKHKRTPALIALRYQLQRGVVVLAKSYNEQRIRQNVQVFEFQLTSEEMKAIDGLNRNVRY 305
Query: 1142 FKLLFAVDHPYYPYSEEY 1195
L P YP+S+EY
Sbjct: 306 LTLDIFAGPPNYPFSDEY 323
>ref|NP_001345.1| aldo-keto reductase family 1 member C2 isoform 1 [Homo sapiens].
Length = 323
Score = 477 bits (1227), Expect = e-134
Identities = 226/318 (71%), Positives = 269/318 (84%)
Frame = +2
Query: 242 RCVKLNDGHLMPVLGLGTLVSEGVPKSKAGEATRVAIEVGYRHIDAAYVYENEEEVGSAL 421
+CVKLNDGH MPVLG GT VPKSKA EA ++AIE G+ HID+A+VY NEE+VG A+
Sbjct: 6 QCVKLNDGHFMPVLGFGTYAPAEVPKSKALEAVKLAIEAGFHHIDSAHVYNNEEQVGLAI 65
Query: 422 REKIADGTVKREELFYTTKLWATFFRPELVRPALERSLKKLRLDYVDLFIIHVPITMKPG 601
R KIADG+VKRE++FYT+KLW+ RPELVRPALERSLK L+LDYVDL++IH P+++KPG
Sbjct: 66 RSKIADGSVKREDIFYTSKLWSNSHRPELVRPALERSLKNLQLDYVDLYLIHFPVSVKPG 125
Query: 602 EELLPKDASGKVIFDTVDLRDTWAALEKCKDAGLTKSIGVSNFNHKQLEMILNKPGLKYK 781
EE++PKD +GK++FDTVDL TW A+EKCKDAGL KSIGVSNFNH+ LEMILNKPGLKYK
Sbjct: 126 EEVIPKDENGKILFDTVDLCATWEAMEKCKDAGLAKSIGVSNFNHRLLEMILNKPGLKYK 185
Query: 782 PVCNQVECHPYLNQSKLLEFCKSKDIVLVAYSALGSQRNSKWVEESNPYLLEDPVLNAIA 961
PVCNQVECHPY NQ KLL+FCKSKDIVLVAYSALGS R WV+ ++P LLEDPVL A+A
Sbjct: 186 PVCNQVECHPYFNQRKLLDFCKSKDIVLVAYSALGSHREEPWVDPNSPVLLEDPVLCALA 245
Query: 962 KKHNRSPAQVALRYQLQRGVVVLAKSFNEQRIKENFQVFDFELPPEDMKTIDGLNQNLRY 1141
KKH R+PA +ALRYQLQRGVVVLAKS+NEQRI++N QVF+F+L E+MK IDGLN+N+RY
Sbjct: 246 KKHKRTPALIALRYQLQRGVVVLAKSYNEQRIRQNVQVFEFQLTSEEMKAIDGLNRNVRY 305
Query: 1142 FKLLFAVDHPYYPYSEEY 1195
L P YP+S+EY
Sbjct: 306 LTLDIFAGPPNYPFSDEY 323
>ref|NP_005980.1| 3-oxo-5-beta-steroid 4-dehydrogenase isoform 1 [Homo sapiens].
Length = 326
Score = 393 bits (1010), Expect = e-109
Identities = 184/322 (57%), Positives = 246/322 (76%), Gaps = 1/322 (0%)
Frame = +2
Query: 233 ALSRCVKLNDGHLMPVLGLGTLVS-EGVPKSKAGEATRVAIEVGYRHIDAAYVYENEEEV 409
A S + L+DG+ +P++GLGT + PK + +VAI+ GYRHID AY+Y+NE EV
Sbjct: 5 AASHRIPLSDGNSIPIIGLGTYSEPKSTPKGACATSVKVAIDTGYRHIDGAYIYQNEHEV 64
Query: 410 GSALREKIADGTVKREELFYTTKLWATFFRPELVRPALERSLKKLRLDYVDLFIIHVPIT 589
G A+REKIA+G V+RE++FY KLWAT PE+VRP LER+L+ L+LDYVDL+II VP+
Sbjct: 65 GEAIREKIAEGKVRREDIFYCGKLWATNHVPEMVRPTLERTLRVLQLDYVDLYIIEVPMA 124
Query: 590 MKPGEELLPKDASGKVIFDTVDLRDTWAALEKCKDAGLTKSIGVSNFNHKQLEMILNKPG 769
KPG+E+ P+D +GK ++ +L TW A+E CKDAGL KS+GVSNFN +QLE+ILNKPG
Sbjct: 125 FKPGDEIYPRDENGKWLYHKSNLCATWEAMEACKDAGLVKSLGVSNFNRRQLELILNKPG 184
Query: 770 LKYKPVCNQVECHPYLNQSKLLEFCKSKDIVLVAYSALGSQRNSKWVEESNPYLLEDPVL 949
LK+KPV NQVECHPY Q KLL+FC+ DIV+ AYS LG+ RN WV S+P LL+D +L
Sbjct: 185 LKHKPVSNQVECHPYFTQPKLLKFCQQHDIVITAYSPLGTSRNPIWVNVSSPPLLKDALL 244
Query: 950 NAIAKKHNRSPAQVALRYQLQRGVVVLAKSFNEQRIKENFQVFDFELPPEDMKTIDGLNQ 1129
N++ K++N++ AQ+ LR+ +QRGVVV+ KSFN +RIKENFQ+FDF L E+MK I+ LN+
Sbjct: 245 NSLGKRYNKTAAQIVLRFNIQRGVVVIPKSFNLERIKENFQIFDFSLTEEEMKDIEALNK 304
Query: 1130 NLRYFKLLFAVDHPYYPYSEEY 1195
N+R+ +LL DHP YP+ +EY
Sbjct: 305 NVRFVELLMWRDHPEYPFHDEY 326
>ref|NP_001177836.1| 3-oxo-5-beta-steroid 4-dehydrogenase isoform 3 [Homo sapiens].
Length = 290
Score = 348 bits (892), Expect = 8e-96
Identities = 164/282 (58%), Positives = 217/282 (76%), Gaps = 1/282 (0%)
Frame = +2
Query: 233 ALSRCVKLNDGHLMPVLGLGTLVS-EGVPKSKAGEATRVAIEVGYRHIDAAYVYENEEEV 409
A S + L+DG+ +P++GLGT + PK + +VAI+ GYRHID AY+Y+NE EV
Sbjct: 5 AASHRIPLSDGNSIPIIGLGTYSEPKSTPKGACATSVKVAIDTGYRHIDGAYIYQNEHEV 64
Query: 410 GSALREKIADGTVKREELFYTTKLWATFFRPELVRPALERSLKKLRLDYVDLFIIHVPIT 589
G A+REKIA+G V+RE++FY KLWAT PE+VRP LER+L+ L+LDYVDL+II VP+
Sbjct: 65 GEAIREKIAEGKVRREDIFYCGKLWATNHVPEMVRPTLERTLRVLQLDYVDLYIIEVPMA 124
Query: 590 MKPGEELLPKDASGKVIFDTVDLRDTWAALEKCKDAGLTKSIGVSNFNHKQLEMILNKPG 769
KPG+E+ P+D +GK ++ +L TW A+E CKDAGL KS+GVSNFN +QLE+ILNKPG
Sbjct: 125 FKPGDEIYPRDENGKWLYHKSNLCATWEAMEACKDAGLVKSLGVSNFNRRQLELILNKPG 184
Query: 770 LKYKPVCNQVECHPYLNQSKLLEFCKSKDIVLVAYSALGSQRNSKWVEESNPYLLEDPVL 949
LK+KPV NQVECHPY Q KLL+FC+ DIV+ AYS LG+ RN WV S+P LL+D +L
Sbjct: 185 LKHKPVSNQVECHPYFTQPKLLKFCQQHDIVITAYSPLGTSRNPIWVNVSSPPLLKDALL 244
Query: 950 NAIAKKHNRSPAQVALRYQLQRGVVVLAKSFNEQRIKENFQV 1075
N++ K++N++ AQ+ LR+ +QRGVVV+ KSFN +RIKENFQV
Sbjct: 245 NSLGKRYNKTAAQIVLRFNIQRGVVVIPKSFNLERIKENFQV 286
>ref|NP_001619.1| aldose reductase [Homo sapiens].
Length = 316
Score = 343 bits (880), Expect = 2e-94
Identities = 168/314 (53%), Positives = 222/314 (70%)
Frame = +2
Query: 254 LNDGHLMPVLGLGTLVSEGVPKSKAGEATRVAIEVGYRHIDAAYVYENEEEVGSALREKI 433
LN+G MP+LGLGT S P + EA +VAI+VGYRHID A+VY+NE EVG A++EK+
Sbjct: 7 LNNGAKMPILGLGTWKS---PPGQVTEAVKVAIDVGYRHIDCAHVYQNENEVGVAIQEKL 63
Query: 434 ADGTVKREELFYTTKLWATFFRPELVRPALERSLKKLRLDYVDLFIIHVPITMKPGEELL 613
+ VKREELF +KLW T+ LV+ A +++L L+LDY+DL++IH P KPG+E
Sbjct: 64 REQVVKREELFIVSKLWCTYHEKGLVKGACQKTLSDLKLDYLDLYLIHWPTGFKPGKEFF 123
Query: 614 PKDASGKVIFDTVDLRDTWAALEKCKDAGLTKSIGVSNFNHKQLEMILNKPGLKYKPVCN 793
P D SG V+ ++ DTWAA+E+ D GL K+IG+SNFNH Q+EMILNKPGLKYKP N
Sbjct: 124 PLDESGNVVPSDTNILDTWAAMEELVDEGLVKAIGISNFNHLQVEMILNKPGLKYKPAVN 183
Query: 794 QVECHPYLNQSKLLEFCKSKDIVLVAYSALGSQRNSKWVEESNPYLLEDPVLNAIAKKHN 973
Q+ECHPYL Q KL+++C+SK IV+ AYS LGS + W + +P LLEDP + AIA KHN
Sbjct: 184 QIECHPYLTQEKLIQYCQSKGIVVTAYSPLGSP-DRPWAKPEDPSLLEDPRIKAIAAKHN 242
Query: 974 RSPAQVALRYQLQRGVVVLAKSFNEQRIKENFQVFDFELPPEDMKTIDGLNQNLRYFKLL 1153
++ AQV +R+ +QR +VV+ KS +RI ENF+VFDFEL +DM T+ N+N R LL
Sbjct: 243 KTTAQVLIRFPMQRNLVVIPKSVTPERIAENFKVFDFELSSQDMTTLLSYNRNWRVCALL 302
Query: 1154 FAVDHPYYPYSEEY 1195
H YP+ EE+
Sbjct: 303 SCTSHKDYPFHEEF 316
>ref|NP_064695.3| aldo-keto reductase family 1 member B10 [Homo sapiens].
Length = 316
Score = 318 bits (815), Expect = 7e-87
Identities = 161/316 (50%), Positives = 211/316 (66%)
Frame = +2
Query: 248 VKLNDGHLMPVLGLGTLVSEGVPKSKAGEATRVAIEVGYRHIDAAYVYENEEEVGSALRE 427
V+L+ MP++GLGT S P K EA +VAI+ GYRHID AYVY+NE EVG A++E
Sbjct: 5 VELSTKAKMPIVGLGTWKS---PLGKVKEAVKVAIDAGYRHIDCAYVYQNEHEVGEAIQE 61
Query: 428 KIADGTVKREELFYTTKLWATFFRPELVRPALERSLKKLRLDYVDLFIIHVPITMKPGEE 607
KI + VKRE+LF +KLW TFF LVR A E++LK L+L Y+D+++IH P K G++
Sbjct: 62 KIQEKAVKREDLFIVSKLWPTFFERPLVRKAFEKTLKDLKLSYLDVYLIHWPQGFKSGDD 121
Query: 608 LLPKDASGKVIFDTVDLRDTWAALEKCKDAGLTKSIGVSNFNHKQLEMILNKPGLKYKPV 787
L PKD G I D W A+E+ D GL K++GVSNF+H Q+E +LNKPGLKYKPV
Sbjct: 122 LFPKDDKGNAIGGKATFLDAWEAMEELVDEGLVKALGVSNFSHFQIEKLLNKPGLKYKPV 181
Query: 788 CNQVECHPYLNQSKLLEFCKSKDIVLVAYSALGSQRNSKWVEESNPYLLEDPVLNAIAKK 967
NQVECHPYL Q KL+++C SK I + AYS LGS + W + +P LLEDP + IA K
Sbjct: 182 TNQVECHPYLTQEKLIQYCHSKGITVTAYSPLGSP-DRPWAKPEDPSLLEDPKIKEIAAK 240
Query: 968 HNRSPAQVALRYQLQRGVVVLAKSFNEQRIKENFQVFDFELPPEDMKTIDGLNQNLRYFK 1147
H ++ AQV +R+ +QR V+V+ KS RI EN QVFDF+L E+M TI N+N R
Sbjct: 241 HKKTAAQVLIRFHIQRNVIVIPKSVTPARIVENIQVFDFKLSDEEMATILSFNRNWRACN 300
Query: 1148 LLFAVDHPYYPYSEEY 1195
+L + YP++ EY
Sbjct: 301 VLQSSHLEDYPFNAEY 316
>ref|NP_001177835.1| 3-oxo-5-beta-steroid 4-dehydrogenase isoform 2 [Homo sapiens].
Length = 285
Score = 307 bits (787), Expect = 1e-83
Identities = 152/322 (47%), Positives = 210/322 (65%), Gaps = 1/322 (0%)
Frame = +2
Query: 233 ALSRCVKLNDGHLMPVLGLGTLVS-EGVPKSKAGEATRVAIEVGYRHIDAAYVYENEEEV 409
A S + L+DG+ +P++GLGT + PK + +VAI+ GYRHID AY+Y+NE EV
Sbjct: 5 AASHRIPLSDGNSIPIIGLGTYSEPKSTPKGACATSVKVAIDTGYRHIDGAYIYQNEHEV 64
Query: 410 GSALREKIADGTVKREELFYTTKLWATFFRPELVRPALERSLKKLRLDYVDLFIIHVPIT 589
G A+REKIA+G V+RE++FY KLWAT PE+VRP LER+L+ L+LDYVDL+II VP+
Sbjct: 65 GEAIREKIAEGKVRREDIFYCGKLWATNHVPEMVRPTLERTLRVLQLDYVDLYIIEVPMA 124
Query: 590 MKPGEELLPKDASGKVIFDTVDLRDTWAALEKCKDAGLTKSIGVSNFNHKQLEMILNKPG 769
KPG+E+ P+D +GK ++ +L TW
Sbjct: 125 FKPGDEIYPRDENGKWLYHKSNLCATW--------------------------------- 151
Query: 770 LKYKPVCNQVECHPYLNQSKLLEFCKSKDIVLVAYSALGSQRNSKWVEESNPYLLEDPVL 949
+VECHPY Q KLL+FC+ DIV+ AYS LG+ RN WV S+P LL+D +L
Sbjct: 152 --------EVECHPYFTQPKLLKFCQQHDIVITAYSPLGTSRNPIWVNVSSPPLLKDALL 203
Query: 950 NAIAKKHNRSPAQVALRYQLQRGVVVLAKSFNEQRIKENFQVFDFELPPEDMKTIDGLNQ 1129
N++ K++N++ AQ+ LR+ +QRGVVV+ KSFN +RIKENFQ+FDF L E+MK I+ LN+
Sbjct: 204 NSLGKRYNKTAAQIVLRFNIQRGVVVIPKSFNLERIKENFQIFDFSLTEEEMKDIEALNK 263
Query: 1130 NLRYFKLLFAVDHPYYPYSEEY 1195
N+R+ +LL DHP YP+ +EY
Sbjct: 264 NVRFVELLMWRDHPEYPFHDEY 285
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 52,865,188
Number of extensions: 1417768
Number of successful extensions: 4602
Number of sequences better than 1.0e-05: 18
Number of HSP's gapped: 4574
Number of HSP's successfully gapped: 19
Length of query: 443
Length of database: 18,297,164
Length adjustment: 106
Effective length of query: 337
Effective length of database: 14,802,980
Effective search space: 4988604260
Effective search space used: 4988604260
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002112
(1329 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_085114.1| estradiol 17 beta-dehydrogenase 5 [Mus musculus]. 460 e-129
Alignment gi|NP_081858.2| aldo-keto reductase family 1, member C-like [Mu... 447 e-126
Alignment gi|NP_038805.2| aldo-keto reductase family 1, member C12 [Mus m... 442 e-124
Alignment gi|NP_038806.2| aldo-keto reductase family 1 member C13 [Mus mu... 441 e-124
Alignment gi|NP_598827.1| aldo-keto reductase family 1 member C18 [Mus mu... 440 e-123
Alignment gi|NP_001013807.2| aldo-keto reductase family 1, member C19 [Mu... 439 e-123
Alignment gi|NP_084177.2| aldo-keto reductase family 1 member C21 [Mus mu... 436 e-122
Alignment gi|NP_598833.1| 3-alpha-hydroxysteroid dehydrogenase [Mus muscu... 425 e-119
Alignment gi|NP_663339.1| 3-oxo-5-beta-steroid 4-dehydrogenase [Mus muscu... 392 e-109
Alignment gi|NP_473421.1| aldo-keto reductase family 1, member C20 [Mus m... 353 2e-97
>ref|NP_085114.1| estradiol 17 beta-dehydrogenase 5 [Mus musculus].
Length = 323
Score = 460 bits (1184), Expect = e-129
Identities = 215/316 (68%), Positives = 268/316 (84%)
Frame = +2
Query: 248 VKLNDGHLMPVLGLGTLVSEGVPKSKAGEATRVAIEVGYRHIDAAYVYENEEEVGSALRE 427
V+L+DGH +P+LG GT + VPKSKA EAT++AI+ G+RHID+A +Y+NE+EVG A+R
Sbjct: 8 VRLSDGHFIPILGFGTYAPQEVPKSKATEATKIAIDAGFRHIDSASMYQNEKEVGLAIRS 67
Query: 428 KIADGTVKREELFYTTKLWATFFRPELVRPALERSLKKLRLDYVDLFIIHVPITMKPGEE 607
KIADGTVKRE++FYT+K+W TF RPELVR LE+SLK+L+LDYVDL++IH P+ MKPGE
Sbjct: 68 KIADGTVKREDIFYTSKVWCTFHRPELVRVCLEQSLKQLQLDYVDLYLIHFPMAMKPGEN 127
Query: 608 LLPKDASGKVIFDTVDLRDTWAALEKCKDAGLTKSIGVSNFNHKQLEMILNKPGLKYKPV 787
LPKD +GK+I+D VD+ DTW A+EKCKDAGL KSIGVSNFN +QLE IL KPGLKYKPV
Sbjct: 128 YLPKDENGKLIYDAVDICDTWEAMEKCKDAGLAKSIGVSNFNRRQLEKILKKPGLKYKPV 187
Query: 788 CNQVECHPYLNQSKLLEFCKSKDIVLVAYSALGSQRNSKWVEESNPYLLEDPVLNAIAKK 967
CNQVECHPYLNQ KLL+FC+SKDIVLVAYSALGS R +WV++S+P LL++PVL ++AKK
Sbjct: 188 CNQVECHPYLNQGKLLDFCRSKDIVLVAYSALGSHREKQWVDQSSPVLLDNPVLGSMAKK 247
Query: 968 HNRSPAQVALRYQLQRGVVVLAKSFNEQRIKENFQVFDFELPPEDMKTIDGLNQNLRYFK 1147
+NR+PA +ALRYQLQRGVVVLAKSF+E+RIKEN QVF+F+L EDMK +D LN+N+RY
Sbjct: 248 YNRTPALIALRYQLQRGVVVLAKSFSEKRIKENMQVFEFQLTSEDMKVLDDLNKNIRYIS 307
Query: 1148 LLFAVDHPYYPYSEEY 1195
DHP +P+ +EY
Sbjct: 308 GSSFKDHPDFPFWDEY 323
>ref|NP_081858.2| aldo-keto reductase family 1, member C-like [Mus musculus].
Length = 322
Score = 447 bits (1151), Expect = e-126
Identities = 209/318 (65%), Positives = 262/318 (82%)
Frame = +2
Query: 242 RCVKLNDGHLMPVLGLGTLVSEGVPKSKAGEATRVAIEVGYRHIDAAYVYENEEEVGSAL 421
R ++L+DGH +PVLG GT V V KS +AT++AI+ G+RHID+AY Y+NEEEVG A+
Sbjct: 5 RYMELSDGHHIPVLGFGTFVPGEVSKSMVAKATKIAIDAGFRHIDSAYFYQNEEEVGLAI 64
Query: 422 REKIADGTVKREELFYTTKLWATFFRPELVRPALERSLKKLRLDYVDLFIIHVPITMKPG 601
R K+ADGTV+RE++FYT+KL T RPELV+P LE+SL+KL+LDYVDL++IH P++MKPG
Sbjct: 65 RSKVADGTVRREDIFYTSKLPCTCHRPELVQPCLEQSLRKLQLDYVDLYLIHCPVSMKPG 124
Query: 602 EELLPKDASGKVIFDTVDLRDTWAALEKCKDAGLTKSIGVSNFNHKQLEMILNKPGLKYK 781
+L+P D +GK++FDTVDL DTW A+EKCKD+GL KSIGVSNFN +QLEMILNKPGL+YK
Sbjct: 125 NDLIPTDENGKLLFDTVDLCDTWEAMEKCKDSGLAKSIGVSNFNRRQLEMILNKPGLRYK 184
Query: 782 PVCNQVECHPYLNQSKLLEFCKSKDIVLVAYSALGSQRNSKWVEESNPYLLEDPVLNAIA 961
PVCNQVECHPYLNQSKLL++CKSKDIVLVAY ALGSQR W+EE+ PYLLEDP L A+A
Sbjct: 185 PVCNQVECHPYLNQSKLLDYCKSKDIVLVAYGALGSQRCKNWIEENAPYLLEDPTLCAMA 244
Query: 962 KKHNRSPAQVALRYQLQRGVVVLAKSFNEQRIKENFQVFDFELPPEDMKTIDGLNQNLRY 1141
+KH ++PA ++LRY LQRG+V++ KSFNE+RIKEN +VF+F LP EDM ID LN+N RY
Sbjct: 245 EKHKQTPALISLRYLLQRGIVIVTKSFNEKRIKENLKVFEFHLPAEDMAVIDRLNRNYRY 304
Query: 1142 FKLLFAVDHPYYPYSEEY 1195
HP YP+ +EY
Sbjct: 305 ATARIISAHPNYPFLDEY 322
>ref|NP_038805.2| aldo-keto reductase family 1, member C12 [Mus musculus].
Length = 323
Score = 442 bits (1137), Expect = e-124
Identities = 209/316 (66%), Positives = 253/316 (80%)
Frame = +2
Query: 248 VKLNDGHLMPVLGLGTLVSEGVPKSKAGEATRVAIEVGYRHIDAAYVYENEEEVGSALRE 427
VKLNDGHL+P LG GT + VPKSK+ EA +A++VGYRH+D AY Y+ EEE+G A++
Sbjct: 8 VKLNDGHLIPALGFGTYKPKEVPKSKSLEAACLALDVGYRHVDTAYAYQVEEEIGQAIQS 67
Query: 428 KIADGTVKREELFYTTKLWATFFRPELVRPALERSLKKLRLDYVDLFIIHVPITMKPGEE 607
KI G VKRE+LF TTKLW FRPELV+PALE+SLK L+LDYVDL++IH P+ MKPG+
Sbjct: 68 KIKAGVVKREDLFITTKLWCGCFRPELVKPALEKSLKSLQLDYVDLYLIHYPVPMKPGDN 127
Query: 608 LLPKDASGKVIFDTVDLRDTWAALEKCKDAGLTKSIGVSNFNHKQLEMILNKPGLKYKPV 787
P D +GK + DTVD DTW LE+CKDAGL KSIGVSNFNH+QLE ILNKPGLKYKPV
Sbjct: 128 ESPLDENGKFLLDTVDFCDTWERLEECKDAGLVKSIGVSNFNHRQLERILNKPGLKYKPV 187
Query: 788 CNQVECHPYLNQSKLLEFCKSKDIVLVAYSALGSQRNSKWVEESNPYLLEDPVLNAIAKK 967
CNQVECH YLNQSKLL++CKSKDIVLVAY ALG+QR +WV++++P LL DPVL +AK+
Sbjct: 188 CNQVECHLYLNQSKLLDYCKSKDIVLVAYGALGTQRYKEWVDQNSPVLLNDPVLCDVAKR 247
Query: 968 HNRSPAQVALRYQLQRGVVVLAKSFNEQRIKENFQVFDFELPPEDMKTIDGLNQNLRYFK 1147
+ RSPA +ALRY QRG+V LA+SF E ++EN QVF+F+L PEDMKT+DGLN+N RY
Sbjct: 248 NKRSPALIALRYLFQRGIVPLAQSFKENEMRENLQVFEFQLSPEDMKTLDGLNKNFRYLP 307
Query: 1148 LLFAVDHPYYPYSEEY 1195
F DHP YP+SEEY
Sbjct: 308 AEFLADHPEYPFSEEY 323
>ref|NP_038806.2| aldo-keto reductase family 1 member C13 [Mus musculus].
Length = 323
Score = 441 bits (1134), Expect = e-124
Identities = 209/317 (65%), Positives = 253/317 (79%)
Frame = +2
Query: 245 CVKLNDGHLMPVLGLGTLVSEGVPKSKAGEATRVAIEVGYRHIDAAYVYENEEEVGSALR 424
CVKLNDGHL+P LG GT + VPKSK+ EA +A++VGYRH+D AY Y+ EEE+G A++
Sbjct: 7 CVKLNDGHLIPALGFGTYKPKEVPKSKSLEAACLALDVGYRHVDTAYAYQVEEEIGQAIQ 66
Query: 425 EKIADGTVKREELFYTTKLWATFFRPELVRPALERSLKKLRLDYVDLFIIHVPITMKPGE 604
KI G VKRE+LF TTKLW T FRPELV+PALE+SLKKL+LDYVDL+I+H P+ MK G+
Sbjct: 67 SKIKAGVVKREDLFITTKLWCTCFRPELVKPALEKSLKKLQLDYVDLYIMHYPVPMKSGD 126
Query: 605 ELLPKDASGKVIFDTVDLRDTWAALEKCKDAGLTKSIGVSNFNHKQLEMILNKPGLKYKP 784
P + GK + DTVD DTW LE+CKDAGL KSIGVSNFNH+QLE ILNKPGLKYKP
Sbjct: 127 NDFPVNEQGKSLLDTVDFCDTWERLEECKDAGLVKSIGVSNFNHRQLERILNKPGLKYKP 186
Query: 785 VCNQVECHPYLNQSKLLEFCKSKDIVLVAYSALGSQRNSKWVEESNPYLLEDPVLNAIAK 964
VCNQVECH YLNQ KLL++C+SKDIVLVAY ALG+QR +WV++++P LL DPVL +AK
Sbjct: 187 VCNQVECHLYLNQRKLLDYCESKDIVLVAYGALGTQRYKEWVDQNSPVLLNDPVLCDVAK 246
Query: 965 KHNRSPAQVALRYQLQRGVVVLAKSFNEQRIKENFQVFDFELPPEDMKTIDGLNQNLRYF 1144
K+ RSPA +ALRY +QRG+V LA+SF E ++EN QVF F+L PEDMKT+DGLN+N RY
Sbjct: 247 KNKRSPALIALRYLIQRGIVPLAQSFKENEMRENLQVFGFQLSPEDMKTLDGLNKNFRYL 306
Query: 1145 KLLFAVDHPYYPYSEEY 1195
F VDHP YP+ EEY
Sbjct: 307 PAEFLVDHPEYPFVEEY 323
>ref|NP_598827.1| aldo-keto reductase family 1 member C18 [Mus musculus].
Length = 323
Score = 440 bits (1131), Expect = e-123
Identities = 208/316 (65%), Positives = 257/316 (81%)
Frame = +2
Query: 248 VKLNDGHLMPVLGLGTLVSEGVPKSKAGEATRVAIEVGYRHIDAAYVYENEEEVGSALRE 427
++LNDGH +PVLG GT +E K K+ E+T++AI+VG+ HID +++Y+NEEE+G A+
Sbjct: 8 IELNDGHSIPVLGFGTYATEEHLKKKSMESTKIAIDVGFCHIDCSHLYQNEEEIGQAILS 67
Query: 428 KIADGTVKREELFYTTKLWATFFRPELVRPALERSLKKLRLDYVDLFIIHVPITMKPGEE 607
KI DGTVKRE++FYT+KLW+T RPELVRP+LE SL+KL LDYVDL++IH P+++KPG E
Sbjct: 68 KIEDGTVKREDIFYTSKLWSTSHRPELVRPSLENSLRKLNLDYVDLYLIHFPVSLKPGNE 127
Query: 608 LLPKDASGKVIFDTVDLRDTWAALEKCKDAGLTKSIGVSNFNHKQLEMILNKPGLKYKPV 787
LLPKD G +IFDTVDL DTW A+EKCKDAGL KSIGVSNFN +QLEMILNKPGLKYKPV
Sbjct: 128 LLPKDEHGNLIFDTVDLCDTWEAMEKCKDAGLAKSIGVSNFNRRQLEMILNKPGLKYKPV 187
Query: 788 CNQVECHPYLNQSKLLEFCKSKDIVLVAYSALGSQRNSKWVEESNPYLLEDPVLNAIAKK 967
CNQVECH YLNQSKLL +CK DIVLVAY ALG+QR + E P LL+DPVL A+AKK
Sbjct: 188 CNQVECHLYLNQSKLLAYCKMNDIVLVAYGALGTQRYKYCINEDTPVLLDDPVLCAMAKK 247
Query: 968 HNRSPAQVALRYQLQRGVVVLAKSFNEQRIKENFQVFDFELPPEDMKTIDGLNQNLRYFK 1147
+ R+PA +ALRYQL RG+V LAKSFNE+RI+EN QVFDF+L +DMK +DGL++NLRYF
Sbjct: 248 YKRTPALIALRYQLDRGIVALAKSFNEERIRENMQVFDFQLASDDMKILDGLDRNLRYFP 307
Query: 1148 LLFAVDHPYYPYSEEY 1195
HP +P+ +EY
Sbjct: 308 ADMFKAHPNFPFFDEY 323
>ref|NP_001013807.2| aldo-keto reductase family 1, member C19 [Mus musculus].
Length = 323
Score = 439 bits (1129), Expect = e-123
Identities = 210/318 (66%), Positives = 250/318 (78%)
Frame = +2
Query: 242 RCVKLNDGHLMPVLGLGTLVSEGVPKSKAGEATRVAIEVGYRHIDAAYVYENEEEVGSAL 421
+CVKLNDG+ +P LG GT E V ++K EA +A+E G+RHID AYVY+ E VG A+
Sbjct: 6 QCVKLNDGNFIPALGFGTYKPEEVNENKPLEAIHLALEAGFRHIDTAYVYQTENHVGQAI 65
Query: 422 REKIADGTVKREELFYTTKLWATFFRPELVRPALERSLKKLRLDYVDLFIIHVPITMKPG 601
R KIA G VKRE++F TTKLW TF RPELVR LE+SLK L+LDY DL++IH P+ MKPG
Sbjct: 66 RSKIAAGLVKREDIFLTTKLWCTFHRPELVRSNLEKSLKNLQLDYADLYLIHYPVQMKPG 125
Query: 602 EELLPKDASGKVIFDTVDLRDTWAALEKCKDAGLTKSIGVSNFNHKQLEMILNKPGLKYK 781
E+L P+D GK +FDTVD+ TW A+EKCKDAGL KSIGVSNFN +QLE ILNKPGLKYK
Sbjct: 126 EDLFPEDEHGKTLFDTVDICATWEAMEKCKDAGLVKSIGVSNFNSRQLEKILNKPGLKYK 185
Query: 782 PVCNQVECHPYLNQSKLLEFCKSKDIVLVAYSALGSQRNSKWVEESNPYLLEDPVLNAIA 961
PVCNQVECH YLNQ KLL +CKSKDIVLVAY ALGSQR +WV+ S+P LL DP+L +A
Sbjct: 186 PVCNQVECHLYLNQRKLLNYCKSKDIVLVAYCALGSQRPKRWVDPSSPVLLNDPILCDMA 245
Query: 962 KKHNRSPAQVALRYQLQRGVVVLAKSFNEQRIKENFQVFDFELPPEDMKTIDGLNQNLRY 1141
KKH RSPAQ+ALRY LQRG+VVLA+S+ E IKEN QVF+FELP EDMK +D L++NLRY
Sbjct: 246 KKHKRSPAQIALRYHLQRGIVVLAQSYKENEIKENIQVFEFELPSEDMKILDSLDRNLRY 305
Query: 1142 FKLLFAVDHPYYPYSEEY 1195
F HP YP+S+E+
Sbjct: 306 APAPFGEGHPEYPFSDEF 323
>ref|NP_084177.2| aldo-keto reductase family 1 member C21 [Mus musculus].
Length = 323
Score = 436 bits (1122), Expect = e-122
Identities = 205/317 (64%), Positives = 254/317 (80%)
Frame = +2
Query: 245 CVKLNDGHLMPVLGLGTLVSEGVPKSKAGEATRVAIEVGYRHIDAAYVYENEEEVGSALR 424
CV LNDG+ +PVLG GT + PKSKA E T++AI+ G+ H D+A VY E+ VG A+R
Sbjct: 7 CVILNDGNFIPVLGFGTALPLECPKSKAKELTKIAIDAGFHHFDSASVYNTEDHVGEAIR 66
Query: 425 EKIADGTVKREELFYTTKLWATFFRPELVRPALERSLKKLRLDYVDLFIIHVPITMKPGE 604
KIADGTV+RE++FYT+K+W T PELVR +LERSL+KL+ DYVDL++IH P+ +KPGE
Sbjct: 67 SKIADGTVRREDIFYTSKVWCTSLHPELVRASLERSLQKLQFDYVDLYLIHYPMALKPGE 126
Query: 605 ELLPKDASGKVIFDTVDLRDTWAALEKCKDAGLTKSIGVSNFNHKQLEMILNKPGLKYKP 784
E P D GK+IFD VDL TW A+EKCKDAGLTKSIGVSNFN++QLEMILNKPGLKYKP
Sbjct: 127 ENFPVDEHGKLIFDRVDLCATWEAMEKCKDAGLTKSIGVSNFNYRQLEMILNKPGLKYKP 186
Query: 785 VCNQVECHPYLNQSKLLEFCKSKDIVLVAYSALGSQRNSKWVEESNPYLLEDPVLNAIAK 964
VCNQVECHPYLNQ KLL+FCKSKDIVLVAY LG+QR WV++++P LL++PVL ++AK
Sbjct: 187 VCNQVECHPYLNQMKLLDFCKSKDIVLVAYGVLGTQRYGGWVDQNSPVLLDEPVLGSMAK 246
Query: 965 KHNRSPAQVALRYQLQRGVVVLAKSFNEQRIKENFQVFDFELPPEDMKTIDGLNQNLRYF 1144
K+NR+PA +ALRYQLQRG+VVL S E+RIKEN QVF+F+L EDMK +DGLN+N+RY
Sbjct: 247 KYNRTPALIALRYQLQRGIVVLNTSLKEERIKENMQVFEFQLSSEDMKVLDGLNRNMRYI 306
Query: 1145 KLLFAVDHPYYPYSEEY 1195
HP +P+ +EY
Sbjct: 307 PAAIFKGHPNWPFLDEY 323
>ref|NP_598833.1| 3-alpha-hydroxysteroid dehydrogenase [Mus musculus].
Length = 323
Score = 425 bits (1092), Expect = e-119
Identities = 196/321 (61%), Positives = 260/321 (80%)
Frame = +2
Query: 233 ALSRCVKLNDGHLMPVLGLGTLVSEGVPKSKAGEATRVAIEVGYRHIDAAYVYENEEEVG 412
++S V LNDGH +P LG GT V + VPK + +AT++AI+ G+RH D+AY+Y+ EEEVG
Sbjct: 3 SVSPRVVLNDGHFIPALGFGTTVPDKVPKDELIKATKIAIDTGFRHFDSAYLYQIEEEVG 62
Query: 413 SALREKIADGTVKREELFYTTKLWATFFRPELVRPALERSLKKLRLDYVDLFIIHVPITM 592
A+R KI DGTVKRE++FYT+KLW+TF RPELVR LE++LK +LDYVDL+IIH P+ +
Sbjct: 63 QAIRSKIEDGTVKREDIFYTSKLWSTFHRPELVRSCLEKTLKNAQLDYVDLYIIHFPMAL 122
Query: 593 KPGEELLPKDASGKVIFDTVDLRDTWAALEKCKDAGLTKSIGVSNFNHKQLEMILNKPGL 772
+PG++L P+D GK++ + VDL DTW A+EKCKDAGL KSIGVSNFN +QLE ILNKPGL
Sbjct: 123 QPGDKLFPRDEHGKLLAEAVDLCDTWEAMEKCKDAGLAKSIGVSNFNFRQLETILNKPGL 182
Query: 773 KYKPVCNQVECHPYLNQSKLLEFCKSKDIVLVAYSALGSQRNSKWVEESNPYLLEDPVLN 952
KYKPVCNQVECH YLNQS++L++CKSKDI+LV+Y LGS R+ WV++ +P LL+DPVL
Sbjct: 183 KYKPVCNQVECHLYLNQSQMLDYCKSKDIILVSYCTLGSSRDKIWVDQKSPVLLDDPVLC 242
Query: 953 AIAKKHNRSPAQVALRYQLQRGVVVLAKSFNEQRIKENFQVFDFELPPEDMKTIDGLNQN 1132
A+A K+ ++PA +A+RYQLQRG+VVL +SF E+RIKE +VF+F+L EDMK +DGL++N
Sbjct: 243 AMANKYKQTPALIAIRYQLQRGIVVLTRSFKEKRIKEFMKVFEFQLASEDMKVLDGLHRN 302
Query: 1133 LRYFKLLFAVDHPYYPYSEEY 1195
LRY + DHP +P+++EY
Sbjct: 303 LRYNTASYFDDHPNHPFTDEY 323
>ref|NP_663339.1| 3-oxo-5-beta-steroid 4-dehydrogenase [Mus musculus].
Length = 325
Score = 392 bits (1007), Expect = e-109
Identities = 184/316 (58%), Positives = 239/316 (75%)
Frame = +2
Query: 248 VKLNDGHLMPVLGLGTLVSEGVPKSKAGEATRVAIEVGYRHIDAAYVYENEEEVGSALRE 427
+ L+DG+ +P++GLGT K A + AI+ GYRHID AYVY NE EVG A+RE
Sbjct: 10 ISLSDGNNIPLIGLGTYSDPRPVPGKTYVAVKTAIDEGYRHIDGAYVYHNEHEVGEAIRE 69
Query: 428 KIADGTVKREELFYTTKLWATFFRPELVRPALERSLKKLRLDYVDLFIIHVPITMKPGEE 607
KIA+G VKREE+FY KLW T P +V PALER+LK L+LDY+DL+II +P+ KPG+E
Sbjct: 70 KIAEGKVKREEIFYCGKLWNTEHVPSMVLPALERTLKALKLDYIDLYIIELPMAFKPGKE 129
Query: 608 LLPKDASGKVIFDTVDLRDTWAALEKCKDAGLTKSIGVSNFNHKQLEMILNKPGLKYKPV 787
+ P+D +G++I+D +L TW ALE CKDAGL KS+GVSNFN +QLE+ILNKPGLKYKPV
Sbjct: 130 IYPRDENGRIIYDKTNLCATWEALEACKDAGLVKSLGVSNFNRRQLELILNKPGLKYKPV 189
Query: 788 CNQVECHPYLNQSKLLEFCKSKDIVLVAYSALGSQRNSKWVEESNPYLLEDPVLNAIAKK 967
NQVECHPY Q+KLL+FC+ DIV+VA+S LG+ RN WV S+P LL D +L ++ KK
Sbjct: 190 TNQVECHPYFTQTKLLKFCQQHDIVIVAHSPLGTCRNPSWVNVSSPPLLNDELLTSLGKK 249
Query: 968 HNRSPAQVALRYQLQRGVVVLAKSFNEQRIKENFQVFDFELPPEDMKTIDGLNQNLRYFK 1147
+N++ AQ+ LR+ +QRG+VV+ KSF +RIKENFQ+FDF L E+MK ID LN+N+RY +
Sbjct: 250 YNKTQAQIVLRFNIQRGIVVIPKSFTPERIKENFQIFDFSLTEEEMKDIDALNKNVRYVE 309
Query: 1148 LLFAVDHPYYPYSEEY 1195
LL DHP YP+ +EY
Sbjct: 310 LLMWSDHPEYPFHDEY 325
>ref|NP_473421.1| aldo-keto reductase family 1, member C20 [Mus musculus].
Length = 262
Score = 353 bits (906), Expect = 2e-97
Identities = 174/276 (63%), Positives = 211/276 (76%)
Frame = +2
Query: 248 VKLNDGHLMPVLGLGTLVSEGVPKSKAGEATRVAIEVGYRHIDAAYVYENEEEVGSALRE 427
V LNDGH +P+LG GT + VP+SKA EAT++AI+ G+RHID A VY+NE+EVG A+R
Sbjct: 8 VLLNDGHFIPILGFGTSAPQEVPRSKATEATKIAIDAGFRHIDCAAVYQNEKEVGLAIRS 67
Query: 428 KIADGTVKREELFYTTKLWATFFRPELVRPALERSLKKLRLDYVDLFIIHVPITMKPGEE 607
KI DGTVKRE++F T+K+W TF RPELV+P GE
Sbjct: 68 KIVDGTVKREDIFCTSKVWQTFHRPELVQP---------------------------GEN 100
Query: 608 LLPKDASGKVIFDTVDLRDTWAALEKCKDAGLTKSIGVSNFNHKQLEMILNKPGLKYKPV 787
PKD +GK I+D VD+ DTW A+EKCKDAGL KSIGV NFN +QLE IL+KPGLKYKPV
Sbjct: 101 YFPKDENGKFIYDAVDICDTWEAMEKCKDAGLAKSIGVCNFNRRQLEKILSKPGLKYKPV 160
Query: 788 CNQVECHPYLNQSKLLEFCKSKDIVLVAYSALGSQRNSKWVEESNPYLLEDPVLNAIAKK 967
CNQVECHPYLNQ KLL+FC+SKDIVLVA+SALGS R+ +WV++S P LL+DPVL ++AKK
Sbjct: 161 CNQVECHPYLNQRKLLDFCRSKDIVLVAHSALGSNRDKEWVDKSFPVLLDDPVLGSMAKK 220
Query: 968 HNRSPAQVALRYQLQRGVVVLAKSFNEQRIKENFQV 1075
+NR+PA +ALRYQ+QRGVVVLAKSF E+RIKEN QV
Sbjct: 221 YNRTPALIALRYQVQRGVVVLAKSFIEKRIKENMQV 256
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 44,791,360
Number of extensions: 1187294
Number of successful extensions: 3812
Number of sequences better than 1.0e-05: 16
Number of HSP's gapped: 3798
Number of HSP's successfully gapped: 16
Length of query: 443
Length of database: 15,617,559
Length adjustment: 104
Effective length of query: 339
Effective length of database: 12,493,815
Effective search space: 4235403285
Effective search space used: 4235403285
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002112
(1329 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001033715.2| aldo-keto reductase family 1, member C-like ... 649 0.0
Alignment gi|NP_001116547.1| aldo-keto reductase family 1 member C4 [Sus ... 645 0.0
Alignment gi|NP_001038034.1| putative aldo-keto reductase family 1 member... 501 e-142
Alignment gi|XP_003130882.1| PREDICTED: LOW QUALITY PROTEIN: prostaglandi... 480 e-136
Alignment gi|NP_001038083.1| aldo-keto reductase family 1 member C1 [Sus ... 435 e-122
Alignment gi|NP_001038035.1| putative aldo-keto reductase family 1 member... 409 e-114
Alignment gi|NP_001001539.1| aldose reductase [Sus scrofa]. 332 4e-91
Alignment gi|NP_001038033.1| 1,5-anhydro-D-fructose reductase [Sus scrofa]. 297 1e-80
Alignment gi|NP_999055.1| alcohol dehydrogenase [NADP+] [Sus scrofa]. 279 2e-75
Alignment gi|XP_003134685.2| PREDICTED: 3-oxo-5-beta-steroid 4-dehydrogen... 234 6e-62
>ref|NP_001033715.2| aldo-keto reductase family 1, member C-like 1 [Sus scrofa].
Length = 322
Score = 649 bits (1673), Expect = 0.0
Identities = 321/322 (99%), Positives = 322/322 (100%)
Frame = +2
Query: 230 MALSRCVKLNDGHLMPVLGLGTLVSEGVPKSKAGEATRVAIEVGYRHIDAAYVYENEEEV 409
MALSRCVKLNDGHLMPVLGLGTLVSEGVPKSKAGEATRVAIEVGYRHIDAAYVYENEEEV
Sbjct: 1 MALSRCVKLNDGHLMPVLGLGTLVSEGVPKSKAGEATRVAIEVGYRHIDAAYVYENEEEV 60
Query: 410 GSALREKIADGTVKREELFYTTKLWATFFRPELVRPALERSLKKLRLDYVDLFIIHVPIT 589
GSALREKIADGTVKREELFYTTKLWATFFRPELVRPALERSLKKLRLDYVDLFIIHVPIT
Sbjct: 61 GSALREKIADGTVKREELFYTTKLWATFFRPELVRPALERSLKKLRLDYVDLFIIHVPIT 120
Query: 590 MKPGEELLPKDASGKVIFDTVDLRDTWAALEKCKDAGLTKSIGVSNFNHKQLEMILNKPG 769
MKPGEELLPKDASGKVIFDTVDLRDTWAALEKCKDAGLTKSIGVSNFNHKQLEMILNKPG
Sbjct: 121 MKPGEELLPKDASGKVIFDTVDLRDTWAALEKCKDAGLTKSIGVSNFNHKQLEMILNKPG 180
Query: 770 LKYKPVCNQVECHPYLNQSKLLEFCKSKDIVLVAYSALGSQRNSKWVEESNPYLLEDPVL 949
LKYKPVCNQVECHPYLNQSKLLEFCKSKDIVLVAYSALGSQRNSKWVEESNPYLLEDPVL
Sbjct: 181 LKYKPVCNQVECHPYLNQSKLLEFCKSKDIVLVAYSALGSQRNSKWVEESNPYLLEDPVL 240
Query: 950 NAIAKKHNRSPAQVALRYQLQRGVVVLAKSFNEQRIKENFQVFDFELPPEDMKTIDGLNQ 1129
NAIAKKHNRSPAQVALRYQLQRGVVVLAKSFNEQRIKENFQVF+FELPPEDMKTIDGLNQ
Sbjct: 241 NAIAKKHNRSPAQVALRYQLQRGVVVLAKSFNEQRIKENFQVFBFELPPEDMKTIDGLNQ 300
Query: 1130 NLRYFKLLFAVDHPYYPYSEEY 1195
NLRYFKLLFAVDHPYYPYSEEY
Sbjct: 301 NLRYFKLLFAVDHPYYPYSEEY 322
>ref|NP_001116547.1| aldo-keto reductase family 1 member C4 [Sus scrofa].
Length = 322
Score = 645 bits (1664), Expect = 0.0
Identities = 320/322 (99%), Positives = 321/322 (99%)
Frame = +2
Query: 230 MALSRCVKLNDGHLMPVLGLGTLVSEGVPKSKAGEATRVAIEVGYRHIDAAYVYENEEEV 409
MAL+RCVKLNDGHLMPVLGLGTLVSEGVPKSKAGEATRVAIEVGYRHIDAAYVYENEEEV
Sbjct: 1 MALNRCVKLNDGHLMPVLGLGTLVSEGVPKSKAGEATRVAIEVGYRHIDAAYVYENEEEV 60
Query: 410 GSALREKIADGTVKREELFYTTKLWATFFRPELVRPALERSLKKLRLDYVDLFIIHVPIT 589
GSALREKIADGTVKREELFYTTKLWATFFRPELVRPALERSLKKLRLDYVDLFIIHVPIT
Sbjct: 61 GSALREKIADGTVKREELFYTTKLWATFFRPELVRPALERSLKKLRLDYVDLFIIHVPIT 120
Query: 590 MKPGEELLPKDASGKVIFDTVDLRDTWAALEKCKDAGLTKSIGVSNFNHKQLEMILNKPG 769
MKPGEELLPKDASGKVIFDTVDLRDTWAALEKCKDAGLTKSIGVSNFNHKQLEMILNKPG
Sbjct: 121 MKPGEELLPKDASGKVIFDTVDLRDTWAALEKCKDAGLTKSIGVSNFNHKQLEMILNKPG 180
Query: 770 LKYKPVCNQVECHPYLNQSKLLEFCKSKDIVLVAYSALGSQRNSKWVEESNPYLLEDPVL 949
LKYKPVCNQVECHPYLNQSKLLEFCKSKDIVLVAYSALGSQRNSKWVEESNPYLLEDPVL
Sbjct: 181 LKYKPVCNQVECHPYLNQSKLLEFCKSKDIVLVAYSALGSQRNSKWVEESNPYLLEDPVL 240
Query: 950 NAIAKKHNRSPAQVALRYQLQRGVVVLAKSFNEQRIKENFQVFDFELPPEDMKTIDGLNQ 1129
NAIAKKHNRSPAQVALRYQLQRGVVVLAKSFNEQRIKENFQVFDFELP EDMKTIDGLNQ
Sbjct: 241 NAIAKKHNRSPAQVALRYQLQRGVVVLAKSFNEQRIKENFQVFDFELPSEDMKTIDGLNQ 300
Query: 1130 NLRYFKLLFAVDHPYYPYSEEY 1195
NLRYFKLLFAVDHPYYPYSEEY
Sbjct: 301 NLRYFKLLFAVDHPYYPYSEEY 322
>ref|NP_001038034.1| putative aldo-keto reductase family 1 member C1 [Sus scrofa].
Length = 337
Score = 501 bits (1291), Expect = e-142
Identities = 244/334 (73%), Positives = 284/334 (85%)
Frame = +2
Query: 239 SRCVKLNDGHLMPVLGLGTLVSEGVPKSKAGEATRVAIEVGYRHIDAAYVYENEEEVGSA 418
S+ ++LNDGH +PVLG GT E VPKS+A EAT+ AIEVG+RHID+AY+Y+NEE+VG A
Sbjct: 5 SQRLRLNDGHFIPVLGFGTYAPEEVPKSEALEATKYAIEVGFRHIDSAYLYQNEEQVGQA 64
Query: 419 LREKIADGTVKREELFYTTKLWATFFRPELVRPALERSLKKLRLDYVDLFIIHVPITMKP 598
+R KIADGTVKRE++FYT+KLWATF RPELVRPALE+SLK L+LDYVDL+IIH P+ +KP
Sbjct: 65 IRSKIADGTVKREDIFYTSKLWATFLRPELVRPALEKSLKNLQLDYVDLYIIHFPVALKP 124
Query: 599 GEELLPKDASGKVIFDTVDLRDTWAALEKCKDAGLTKSIGVSNFNHKQLEMILNKPGLKY 778
GEELLP D +GK +FDTVDL TW ALEKCKDAGLTKSIGVSNFNH+QLE ILNKPGLKY
Sbjct: 125 GEELLPTDENGKALFDTVDLCRTWEALEKCKDAGLTKSIGVSNFNHQQLERILNKPGLKY 184
Query: 779 KPVCNQVECHPYLNQSKLLEFCKSKDIVLVAYSALGSQRNSKWVEESNPYLLEDPVLNAI 958
KPVCNQVECHPYLNQSKLL+FCKS+DI+ VAYSALGSQR WV ++P LLEDPVL+AI
Sbjct: 185 KPVCNQVECHPYLNQSKLLDFCKSRDIIPVAYSALGSQRVKGWVNLNHPVLLEDPVLHAI 244
Query: 959 AKKHNRSPAQVALRYQLQRGVVVLAKSFNEQRIKENFQVFDFELPPEDMKTIDGLNQNLR 1138
AKKH ++ A +ALRYQLQRGVVVLAKS+N++RIKEN QVF+FELPPEDMKTIDGLNQNLR
Sbjct: 245 AKKHKQTSAVIALRYQLQRGVVVLAKSYNKRRIKENLQVFNFELPPEDMKTIDGLNQNLR 304
Query: 1139 YFKLLFAVDHPYYPYSEEY*AGALHRVGYQNLLL 1240
Y +AV HP YP+ H V YQN++L
Sbjct: 305 YCDFSYAVGHPDYPFRPR----VTHHVFYQNIML 334
>ref|XP_003130882.1| PREDICTED: LOW QUALITY PROTEIN: prostaglandin F synthase 1-like [Sus
scrofa].
Length = 323
Score = 480 bits (1235), Expect = e-136
Identities = 229/319 (71%), Positives = 272/319 (85%)
Frame = +2
Query: 239 SRCVKLNDGHLMPVLGLGTLVSEGVPKSKAGEATRVAIEVGYRHIDAAYVYENEEEVGSA 418
S+C++LNDGHL+PVLG GT E VPKS+A EAT+ AIEVG+ HID A++Y+ EE+VG A
Sbjct: 5 SQCLELNDGHLIPVLGFGTYAPEEVPKSEALEATKYAIEVGFCHIDGAHLYQKEEQVGQA 64
Query: 419 LREKIADGTVKREELFYTTKLWATFFRPELVRPALERSLKKLRLDYVDLFIIHVPITMKP 598
+R KIADG VKRE++FYT+KLWATF RPELV+PALE+SLK L+LDYVDL+IIH P+ +KP
Sbjct: 65 IRSKIADGXVKREDIFYTSKLWATFLRPELVQPALEKSLKNLQLDYVDLYIIHFPVALKP 124
Query: 599 GEELLPKDASGKVIFDTVDLRDTWAALEKCKDAGLTKSIGVSNFNHKQLEMILNKPGLKY 778
G+ELLP+D +GK+I DTVD TW ALEKCKDAGLTKSIGVSNFNH+QLE ILNKPGLKY
Sbjct: 125 GDELLPRDENGKIIMDTVDFCHTWEALEKCKDAGLTKSIGVSNFNHQQLERILNKPGLKY 184
Query: 779 KPVCNQVECHPYLNQSKLLEFCKSKDIVLVAYSALGSQRNSKWVEESNPYLLEDPVLNAI 958
KPVCNQVECHPY NQSKLL+FCKS DIVLVA +ALGSQR WV ++P LLEDPVL+AI
Sbjct: 185 KPVCNQVECHPYFNQSKLLDFCKSNDIVLVANAALGSQRLKGWVNLNHPVLLEDPVLHAI 244
Query: 959 AKKHNRSPAQVALRYQLQRGVVVLAKSFNEQRIKENFQVFDFELPPEDMKTIDGLNQNLR 1138
AKKH ++ A +ALRYQLQRGVVVLAKS N++RIKEN QVFDFEL EDMK IDGLN+N+R
Sbjct: 245 AKKHKQTSAVIALRYQLQRGVVVLAKSXNKKRIKENLQVFDFELTTEDMKAIDGLNRNMR 304
Query: 1139 YFKLLFAVDHPYYPYSEEY 1195
Y+ + DHP YP++EE+
Sbjct: 305 YYLAPYGADHPEYPFTEEF 323
>ref|NP_001038083.1| aldo-keto reductase family 1 member C1 [Sus scrofa].
Length = 324
Score = 435 bits (1118), Expect = e-122
Identities = 206/304 (67%), Positives = 256/304 (84%)
Frame = +2
Query: 248 VKLNDGHLMPVLGLGTLVSEGVPKSKAGEATRVAIEVGYRHIDAAYVYENEEEVGSALRE 427
+K+NDGH +P+LGLGT V KS+ A + AI++GYRHID+A++Y+NEEE+G A++
Sbjct: 10 LKMNDGHTIPMLGLGTSAPSQVLKSETEMAIKRAIDIGYRHIDSAHLYQNEEEIGRAIQM 69
Query: 428 KIADGTVKREELFYTTKLWATFFRPELVRPALERSLKKLRLDYVDLFIIHVPITMKPGEE 607
KIADGTVKR+++F+TTK+W TFFRPELV+ LERSLKKL++ YVDL+++H P ++ GE+
Sbjct: 70 KIADGTVKRDDIFHTTKVWGTFFRPELVQTNLERSLKKLQMSYVDLYLLHHPEALQAGED 129
Query: 608 LLPKDASGKVIFDTVDLRDTWAALEKCKDAGLTKSIGVSNFNHKQLEMILNKPGLKYKPV 787
PKD G +IFDTVDL TW A+EKCK+ GLT+SIGVSNFN KQLE ILNKPGLKYKPV
Sbjct: 130 FFPKDTHGNIIFDTVDLCTTWEAMEKCKNEGLTRSIGVSNFNCKQLERILNKPGLKYKPV 189
Query: 788 CNQVECHPYLNQSKLLEFCKSKDIVLVAYSALGSQRNSKWVEESNPYLLEDPVLNAIAKK 967
CNQVECHPYLNQSKLLEFC+S DI+LVAY+ LGS KWV ++ P LL+DPVLNAIA+K
Sbjct: 190 CNQVECHPYLNQSKLLEFCRSHDILLVAYATLGSDARKKWVIKNKPSLLQDPVLNAIAEK 249
Query: 968 HNRSPAQVALRYQLQRGVVVLAKSFNEQRIKENFQVFDFELPPEDMKTIDGLNQNLRYFK 1147
H R+PAQVALRYQLQRGVV LAKSF+EQRIKENFQVF+FEL PEDM+++DGLN+N+ Y +
Sbjct: 250 HRRTPAQVALRYQLQRGVVALAKSFSEQRIKENFQVFEFELTPEDMESLDGLNRNMCYLQ 309
Query: 1148 LLFA 1159
LF+
Sbjct: 310 DLFS 313
>ref|NP_001038035.1| putative aldo-keto reductase family 1 member C2 [Sus scrofa].
Length = 271
Score = 409 bits (1051), Expect = e-114
Identities = 197/267 (73%), Positives = 230/267 (86%)
Frame = +2
Query: 239 SRCVKLNDGHLMPVLGLGTLVSEGVPKSKAGEATRVAIEVGYRHIDAAYVYENEEEVGSA 418
S+C++LNDGHL PVLG GT E VPKS+A EA + AIEVG+ HID A++Y+ EE+VG A
Sbjct: 5 SQCLELNDGHLXPVLGFGTYAPEEVPKSEALEAAKYAIEVGFCHIDGAHLYQKEEQVGQA 64
Query: 419 LREKIADGTVKREELFYTTKLWATFFRPELVRPALERSLKKLRLDYVDLFIIHVPITMKP 598
+R KIADGTVKRE++FYT+KLWATF RPELV+PALE+SLK L+LDYVDL+IIH P+ +KP
Sbjct: 65 IRSKIADGTVKREDIFYTSKLWATFLRPELVQPALEKSLKNLQLDYVDLYIIHFPVALKP 124
Query: 599 GEELLPKDASGKVIFDTVDLRDTWAALEKCKDAGLTKSIGVSNFNHKQLEMILNKPGLKY 778
G+ELLP+D +GK+I DTVD TW ALEKCKDAGLTKSIGVSNFNH+QLE ILNKPGLKY
Sbjct: 125 GDELLPRDENGKIIMDTVDFCHTWEALEKCKDAGLTKSIGVSNFNHQQLERILNKPGLKY 184
Query: 779 KPVCNQVECHPYLNQSKLLEFCKSKDIVLVAYSALGSQRNSKWVEESNPYLLEDPVLNAI 958
KPVCNQVECHPY NQSKLL+FCKS DIVLVA +ALGSQR WV ++P LLEDPVL+AI
Sbjct: 185 KPVCNQVECHPYFNQSKLLDFCKSNDIVLVAXAALGSQRLKGWVNLNHPXLLEDPVLHAI 244
Query: 959 AKKHNRSPAQVALRYQLQRGVVVLAKS 1039
AKKH ++ A +ALRYQLQRGVVVLAKS
Sbjct: 245 AKKHKQTSAVIALRYQLQRGVVVLAKS 271
>ref|NP_001001539.1| aldose reductase [Sus scrofa].
Length = 316
Score = 332 bits (850), Expect = 4e-91
Identities = 166/314 (52%), Positives = 214/314 (68%)
Frame = +2
Query: 254 LNDGHLMPVLGLGTLVSEGVPKSKAGEATRVAIEVGYRHIDAAYVYENEEEVGSALREKI 433
L G MP+LGLGT S P K EA +VAI++GYRHID A+VY+NE EVG L+EK+
Sbjct: 7 LYTGAKMPILGLGTWKS---PPGKVTEAVKVAIDLGYRHIDCAHVYQNENEVGLGLQEKL 63
Query: 434 ADGTVKREELFYTTKLWATFFRPELVRPALERSLKKLRLDYVDLFIIHVPITMKPGEELL 613
VKRE+LF +KLW T LV+ A + +L+ L+LDY+DL++IH P KPG++
Sbjct: 64 QGQVVKREDLFIVSKLWCTDHEKNLVKGACQTTLRNLKLDYLDLYLIHWPTGFKPGKDPF 123
Query: 614 PKDASGKVIFDTVDLRDTWAALEKCKDAGLTKSIGVSNFNHKQLEMILNKPGLKYKPVCN 793
P D G V+ D D +TW A+E+ D GL K+IGVSNFNH Q+E ILNKPGLKYKP N
Sbjct: 124 PLDGDGNVVPDESDFVETWEAMEELVDEGLVKAIGVSNFNHLQVEKILNKPGLKYKPAVN 183
Query: 794 QVECHPYLNQSKLLEFCKSKDIVLVAYSALGSQRNSKWVEESNPYLLEDPVLNAIAKKHN 973
Q+E HPYL Q KL+E+CKSK IV+ AYS LGS + W + +P LLEDP + AIA K+N
Sbjct: 184 QIEVHPYLTQEKLIEYCKSKGIVVTAYSPLGSP-DRPWAKPEDPSLLEDPRIKAIAAKYN 242
Query: 974 RSPAQVALRYQLQRGVVVLAKSFNEQRIKENFQVFDFELPPEDMKTIDGLNQNLRYFKLL 1153
++ AQV +R+ +QR ++V+ KS +RI ENFQVFDFEL PEDM T+ N+N R L+
Sbjct: 243 KTTAQVLIRFPMQRNLIVIPKSVTPERIAENFQVFDFELSPEDMNTLLSYNRNWRVCALM 302
Query: 1154 FAVDHPYYPYSEEY 1195
H YP+ EEY
Sbjct: 303 SCASHKDYPFHEEY 316
>ref|NP_001038033.1| 1,5-anhydro-D-fructose reductase [Sus scrofa].
Length = 288
Score = 297 bits (760), Expect = 1e-80
Identities = 150/289 (51%), Positives = 198/289 (68%)
Frame = +2
Query: 272 MPVLGLGTLVSEGVPKSKAGEATRVAIEVGYRHIDAAYVYENEEEVGSALREKIADGTVK 451
+PVLGLGT + P + EA +VAI+ GYRH D AY+Y NE EVG ++ KI +G V+
Sbjct: 4 IPVLGLGTW--QAAP-GEVTEAVKVAIDTGYRHFDCAYLYHNENEVGVGIQAKIDEGVVR 60
Query: 452 REELFYTTKLWATFFRPELVRPALERSLKKLRLDYVDLFIIHVPITMKPGEELLPKDASG 631
RE+LF +KLW T + LV+ A RSLK L+L Y+DL++IH P+ KPGE LP D SG
Sbjct: 61 REDLFIVSKLWCTCHKKSLVKSACTRSLKALKLQYLDLYLIHWPMGFKPGEVDLPVDRSG 120
Query: 632 KVIFDTVDLRDTWAALEKCKDAGLTKSIGVSNFNHKQLEMILNKPGLKYKPVCNQVECHP 811
++ D DTW A+E GL ++IGVSNFNH+QLE +LNKP L+ KPV NQ+ECHP
Sbjct: 121 MIVASNTDFLDTWEAMEDLVIEGLVRAIGVSNFNHEQLERLLNKPNLRVKPVTNQIECHP 180
Query: 812 YLNQSKLLEFCKSKDIVLVAYSALGSQRNSKWVEESNPYLLEDPVLNAIAKKHNRSPAQV 991
YL Q KL+ FC+S+++ + AY LG E P LLEDPV+ IA+KH +S AQ+
Sbjct: 181 YLTQKKLISFCQSRNVSVTAYRPLGGS------SEGVP-LLEDPVIQTIAQKHGKSAAQI 233
Query: 992 ALRYQLQRGVVVLAKSFNEQRIKENFQVFDFELPPEDMKTIDGLNQNLR 1138
+R+Q+QR V+V+ KS N +RI ENFQVFDFEL +DM + GL++NLR
Sbjct: 234 LIRFQIQRNVIVIPKSVNPKRILENFQVFDFELSEQDMTDLLGLDRNLR 282
>ref|NP_999055.1| alcohol dehydrogenase [NADP+] [Sus scrofa].
Length = 325
Score = 279 bits (714), Expect = 2e-75
Identities = 143/327 (43%), Positives = 209/327 (63%), Gaps = 10/327 (3%)
Frame = +2
Query: 245 CVKLNDGHLMPVLGLGTLVSEGVPKSKAGEATRVAIEVGYRHIDAAYVYENEEEVGSALR 424
CV L+ G MP++GLGT SE + A + A+ VGYRHID A +Y NE E+G AL
Sbjct: 5 CVLLHTGQKMPLIGLGTWKSE---PGQVKAAIKYALTVGYRHIDCAAIYGNELEIGEALT 61
Query: 425 EKIADG-TVKREELFYTTKLWATFFRPELVRPALERSLKKLRLDYVDLFIIHVPITMKPG 601
E + G V REELF T+KLW T PE V PAL ++L L+L+Y+DL+++H P + G
Sbjct: 62 ETVGPGKAVPREELFVTSKLWNTKHHPEDVEPALRKTLADLQLEYLDLYLMHWPYAFERG 121
Query: 602 EELLPKDASGKVIFDTVDLRDTWAALEKCKDAGLTKSIGVSNFNHKQLEMILNKPGLKYK 781
+ PK+A G + +D +DTW ALE GL +++G+SNF+ +Q++ +L+ + +
Sbjct: 122 DNPFPKNADGTIRYDATHYKDTWKALEALVAKGLVRALGLSNFSSRQIDDVLSVASV--R 179
Query: 782 PVCNQVECHPYLNQSKLLEFCKSKDIVLVAYSALGSQRNSKWVEESNPYLLEDPVLNAIA 961
P QVECHPYL Q++L+ C+++ + + AYS LGS + W + + P LLE+PV+ A+A
Sbjct: 180 PAVLQVECHPYLAQNELIAHCQARGLEVTAYSPLGSS-DRAWRDPNEPVLLEEPVVQALA 238
Query: 962 KKHNRSPAQVALRYQLQRGVVVLAKSFNEQRIKENFQVFDFELPPEDMKTIDGLNQNLRY 1141
+K+NRSPAQ+ LR+Q+QR V+ + KS RI +N QVFDF PE+MK +D LN+NLR+
Sbjct: 239 EKYNRSPAQILLRWQVQRKVICIPKSVTPSRIPQNIQVFDFTFSPEEMKQLDALNKNLRF 298
Query: 1142 FKLLFAVD---------HPYYPYSEEY 1195
+ VD HP YP+++ Y
Sbjct: 299 IVPMLTVDGKRVPRDAGHPLYPFNDPY 325
>ref|XP_003134685.2| PREDICTED: 3-oxo-5-beta-steroid 4-dehydrogenase-like [Sus scrofa].
Length = 265
Score = 234 bits (598), Expect = 6e-62
Identities = 111/186 (59%), Positives = 144/186 (77%), Gaps = 1/186 (0%)
Frame = +2
Query: 248 VKLNDGHLMPVLGLGTLVSEGV-PKSKAGEATRVAIEVGYRHIDAAYVYENEEEVGSALR 424
+ LNDG+ +P++GLGT + PK G + ++AI+ GYRHID A++Y+NE EVG A+R
Sbjct: 10 IPLNDGNSIPIIGLGTFSEPKLTPKGICGTSVKIAIDTGYRHIDGAFIYQNEHEVGEAIR 69
Query: 425 EKIADGTVKREELFYTTKLWATFFRPELVRPALERSLKKLRLDYVDLFIIHVPITMKPGE 604
EKIA+G V+RE++FY KLWAT PE+VRPALER+LK L+LDYVDL+II VP+ KPG+
Sbjct: 70 EKIAEGKVRREDIFYCGKLWATNLDPEMVRPALERTLKVLQLDYVDLYIIEVPMAFKPGD 129
Query: 605 ELLPKDASGKVIFDTVDLRDTWAALEKCKDAGLTKSIGVSNFNHKQLEMILNKPGLKYKP 784
+ PKD +GK ++ +L TW ALE CKD GL KS+GVSNFN +QLE+ILNKPGLKYKP
Sbjct: 130 DNFPKDENGKWLYCKSNLCGTWEALEACKDDGLVKSLGVSNFNRRQLELILNKPGLKYKP 189
Query: 785 VCNQVE 802
V NQV+
Sbjct: 190 VSNQVQ 195
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 33,226,457
Number of extensions: 897204
Number of successful extensions: 2941
Number of sequences better than 1.0e-05: 10
Number of HSP's gapped: 2933
Number of HSP's successfully gapped: 10
Length of query: 443
Length of database: 11,343,932
Length adjustment: 102
Effective length of query: 341
Effective length of database: 8,804,438
Effective search space: 3002313358
Effective search space used: 3002313358
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002112
(1329 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr10 618 e-174
Sscrofa_Chr18 66 5e-08
>Sscrofa_Chr10
|| Length = 79102373
Score = 618 bits (312), Expect = e-174
Identities = 312/312 (100%)
Strand = Plus / Plus
Query: 1 gacgttcaaacccctgtagcatgcatgctgtatcctgtgaaatatgcctgcagagacttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71747473 gacgttcaaacccctgtagcatgcatgctgtatcctgtgaaatatgcctgcagagacttg 71747532
Query: 61 aaagaactagtgggacagcagtgagtcgattccagtttcactgtggaaacattggcagct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71747533 aaagaactagtgggacagcagtgagtcgattccagtttcactgtggaaacattggcagct 71747592
Query: 121 gacccggccccgcctatctttgggggttggtggggataaagtacacgtggcctgcaaaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71747593 gacccggccccgcctatctttgggggttggtggggataaagtacacgtggcctgcaaaca 71747652
Query: 181 agagaaggaaagcaagacagagtgagcccagccggggctgtggataaagatggcactcag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71747653 agagaaggaaagcaagacagagtgagcccagccggggctgtggataaagatggcactcag 71747712
Query: 241 ccgttgcgtgaagctgaatgatgggcacctcatgcccgttcttggacttggcactctcgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71747713 ccgttgcgtgaagctgaatgatgggcacctcatgcccgttcttggacttggcactctcgt 71747772
Query: 301 ctctgaaggggt 312
||||||||||||
Sbjct: 71747773 ctctgaaggggt 71747784
Score = 617 bits (311), Expect = e-174
Identities = 311/311 (100%)
Strand = Plus / Plus
Query: 2 acgttcaaacccctgtagcatgcatgctgtatcctgtgaaatatgcctgcagagacttga 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72009237 acgttcaaacccctgtagcatgcatgctgtatcctgtgaaatatgcctgcagagacttga 72009296
Query: 62 aagaactagtgggacagcagtgagtcgattccagtttcactgtggaaacattggcagctg 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72009297 aagaactagtgggacagcagtgagtcgattccagtttcactgtggaaacattggcagctg 72009356
Query: 122 acccggccccgcctatctttgggggttggtggggataaagtacacgtggcctgcaaacaa 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72009357 acccggccccgcctatctttgggggttggtggggataaagtacacgtggcctgcaaacaa 72009416
Query: 182 gagaaggaaagcaagacagagtgagcccagccggggctgtggataaagatggcactcagc 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72009417 gagaaggaaagcaagacagagtgagcccagccggggctgtggataaagatggcactcagc 72009476
Query: 242 cgttgcgtgaagctgaatgatgggcacctcatgcccgttcttggacttggcactctcgtc 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72009477 cgttgcgtgaagctgaatgatgggcacctcatgcccgttcttggacttggcactctcgtc 72009536
Query: 302 tctgaaggggt 312
|||||||||||
Sbjct: 72009537 tctgaaggggt 72009547
Score = 335 bits (169), Expect = 4e-89
Identities = 169/169 (100%)
Strand = Plus / Plus
Query: 906 gggtggaagagagcaacccatatctcttagaggatccagtcttaaatgctattgccaaga 965
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71756290 gggtggaagagagcaacccatatctcttagaggatccagtcttaaatgctattgccaaga 71756349
Query: 966 aacacaacagaagcccagcgcaggttgccctgcgctaccagctgcagcggggagtggtgg 1025
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71756350 aacacaacagaagcccagcgcaggttgccctgcgctaccagctgcagcggggagtggtgg 71756409
Query: 1026 tcctggccaagagcttcaatgagcagaggatcaaagagaacttccaggt 1074
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71756410 tcctggccaagagcttcaatgagcagaggatcaaagagaacttccaggt 71756458
Score = 335 bits (169), Expect = 4e-89
Identities = 169/169 (100%)
Strand = Plus / Plus
Query: 906 gggtggaagagagcaacccatatctcttagaggatccagtcttaaatgctattgccaaga 965
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72018053 gggtggaagagagcaacccatatctcttagaggatccagtcttaaatgctattgccaaga 72018112
Query: 966 aacacaacagaagcccagcgcaggttgccctgcgctaccagctgcagcggggagtggtgg 1025
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72018113 aacacaacagaagcccagcgcaggttgccctgcgctaccagctgcagcggggagtggtgg 72018172
Query: 1026 tcctggccaagagcttcaatgagcagaggatcaaagagaacttccaggt 1074
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72018173 tcctggccaagagcttcaatgagcagaggatcaaagagaacttccaggt 72018221
Score = 327 bits (165), Expect = 9e-87
Identities = 168/169 (99%)
Strand = Plus / Plus
Query: 310 ggtccctaagagcaaggctggcgaggccaccagagtggctatcgaggtaggttaccgtca 369
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71750384 ggtccctaagagcaaggctggcgaggccaccagagtggctatcgaggtaggttaccgtca 71750443
Query: 370 cattgatgcagcctacgtctatgaaaacgaggaggaggtgggcagtgccctgcgggagaa 429
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 71750444 cattgatgcagcctacgtctatgaaaacgaggaggaggtgggcagcgccctgcgggagaa 71750503
Query: 430 gatcgcggatggcacggtgaagagggaggagctgttctacaccaccaag 478
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71750504 gatcgcggatggcacggtgaagagggaggagctgttctacaccaccaag 71750552
Score = 327 bits (165), Expect = 9e-87
Identities = 168/169 (99%)
Strand = Plus / Plus
Query: 310 ggtccctaagagcaaggctggcgaggccaccagagtggctatcgaggtaggttaccgtca 369
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72012147 ggtccctaagagcaaggctggcgaggccaccagagtggctatcgaggtaggttaccgtca 72012206
Query: 370 cattgatgcagcctacgtctatgaaaacgaggaggaggtgggcagtgccctgcgggagaa 429
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 72012207 cattgatgcagcctacgtctatgaaaacgaggaggaggtgggcagcgccctgcgggagaa 72012266
Query: 430 gatcgcggatggcacggtgaagagggaggagctgttctacaccaccaag 478
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72012267 gatcgcggatggcacggtgaagagggaggagctgttctacaccaccaag 72012315
Score = 252 bits (127), Expect = 4e-64
Identities = 127/127 (100%)
Strand = Plus / Plus
Query: 673 ggctctggagaagtgtaaagatgcaggcttgaccaaatccatcggggtgtccaatttcaa 732
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71753806 ggctctggagaagtgtaaagatgcaggcttgaccaaatccatcggggtgtccaatttcaa 71753865
Query: 733 tcacaagcagctggagatgatcctgaacaagccagggctcaagtacaagcccgtctgcaa 792
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71753866 tcacaagcagctggagatgatcctgaacaagccagggctcaagtacaagcccgtctgcaa 71753925
Query: 793 ccaggtg 799
|||||||
Sbjct: 71753926 ccaggtg 71753932
Score = 252 bits (127), Expect = 4e-64
Identities = 127/127 (100%)
Strand = Plus / Plus
Query: 673 ggctctggagaagtgtaaagatgcaggcttgaccaaatccatcggggtgtccaatttcaa 732
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72015569 ggctctggagaagtgtaaagatgcaggcttgaccaaatccatcggggtgtccaatttcaa 72015628
Query: 733 tcacaagcagctggagatgatcctgaacaagccagggctcaagtacaagcccgtctgcaa 792
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72015629 tcacaagcagctggagatgatcctgaacaagccagggctcaagtacaagcccgtctgcaa 72015688
Query: 793 ccaggtg 799
|||||||
Sbjct: 72015689 ccaggtg 72015695
Score = 236 bits (119), Expect = 3e-59
Identities = 119/119 (100%)
Strand = Plus / Plus
Query: 477 agctttgggctactttctttcgacctgaattggttcgaccagccctggaaagatcactga 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71751707 agctttgggctactttctttcgacctgaattggttcgaccagccctggaaagatcactga 71751766
Query: 537 agaaacttcggctggattatgttgatctcttcattattcacgtgccaatcacgatgaag 595
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71751767 agaaacttcggctggattatgttgatctcttcattattcacgtgccaatcacgatgaag 71751825
Score = 236 bits (119), Expect = 3e-59
Identities = 119/119 (100%)
Strand = Plus / Plus
Query: 477 agctttgggctactttctttcgacctgaattggttcgaccagccctggaaagatcactga 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72013470 agctttgggctactttctttcgacctgaattggttcgaccagccctggaaagatcactga 72013529
Query: 537 agaaacttcggctggattatgttgatctcttcattattcacgtgccaatcacgatgaag 595
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72013530 agaaacttcggctggattatgttgatctcttcattattcacgtgccaatcacgatgaag 72013588
Score = 226 bits (114), Expect = 2e-56
Identities = 114/114 (100%)
Strand = Plus / Plus
Query: 794 caggtggaatgccacccttacctcaatcagagcaaacttctggagttttgcaagtccaag 853
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71754613 caggtggaatgccacccttacctcaatcagagcaaacttctggagttttgcaagtccaag 71754672
Query: 854 gacatcgttctagttgcctatagtgcactgggatcccaaagaaactcaaagtgg 907
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71754673 gacatcgttctagttgcctatagtgcactgggatcccaaagaaactcaaagtgg 71754726
Score = 226 bits (114), Expect = 2e-56
Identities = 114/114 (100%)
Strand = Plus / Plus
Query: 794 caggtggaatgccacccttacctcaatcagagcaaacttctggagttttgcaagtccaag 853
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72016376 caggtggaatgccacccttacctcaatcagagcaaacttctggagttttgcaagtccaag 72016435
Query: 854 gacatcgttctagttgcctatagtgcactgggatcccaaagaaactcaaagtgg 907
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72016436 gacatcgttctagttgcctatagtgcactgggatcccaaagaaactcaaagtgg 72016489
Score = 176 bits (89), Expect = 2e-41
Identities = 131/141 (92%), Gaps = 3/141 (2%)
Strand = Plus / Plus
Query: 1156 tgctgtcgatcacccttactacccctattctgaagagtactgagcgggagctctccatcg 1215
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71760654 tgctgtcgatcacccttactacccctattctgaagagtactgagcgggagctctccatcg 71760713
Query: 1216 ggtgggctaccagaacctcttgctttcccgggctttgaagaagggtttctgtacctggga 1275
||||||||||||||||||||||| ||| ||||| ||||| |||||||||||| || ||
Sbjct: 71760714 ggtgggctaccagaacctcttgc-ttctagggctgtgaag-agggtttctgta-cttggt 71760770
Query: 1276 aaaggggtttaataaaataaa 1296
| ||| |||||||||||||||
Sbjct: 71760771 agaggtgtttaataaaataaa 71760791
Score = 176 bits (89), Expect = 2e-41
Identities = 131/141 (92%), Gaps = 3/141 (2%)
Strand = Plus / Plus
Query: 1156 tgctgtcgatcacccttactacccctattctgaagagtactgagcgggagctctccatcg 1215
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72022417 tgctgtcgatcacccttactacccctattctgaagagtactgagcgggagctctccatcg 72022476
Query: 1216 ggtgggctaccagaacctcttgctttcccgggctttgaagaagggtttctgtacctggga 1275
||||||||||||||||||||||| ||| ||||| ||||| |||||||||||| || ||
Sbjct: 72022477 ggtgggctaccagaacctcttgc-ttctagggctgtgaag-agggtttctgta-cttggt 72022533
Query: 1276 aaaggggtttaataaaataaa 1296
| ||| |||||||||||||||
Sbjct: 72022534 agaggtgtttaataaaataaa 72022554
Score = 172 bits (87), Expect = 3e-40
Identities = 87/87 (100%)
Strand = Plus / Plus
Query: 1069 ccaggtttttgactttgaattgcctccagaagatatgaaaacaatcgatggcctcaacca 1128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71758758 ccaggtttttgactttgaattgcctccagaagatatgaaaacaatcgatggcctcaacca 71758817
Query: 1129 aaatttaagatattttaagttactctt 1155
|||||||||||||||||||||||||||
Sbjct: 71758818 aaatttaagatattttaagttactctt 71758844
Score = 172 bits (87), Expect = 3e-40
Identities = 87/87 (100%)
Strand = Plus / Plus
Query: 1069 ccaggtttttgactttgaattgcctccagaagatatgaaaacaatcgatggcctcaacca 1128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72020521 ccaggtttttgactttgaattgcctccagaagatatgaaaacaatcgatggcctcaacca 72020580
Query: 1129 aaatttaagatattttaagttactctt 1155
|||||||||||||||||||||||||||
Sbjct: 72020581 aaatttaagatattttaagttactctt 72020607
Score = 161 bits (81), Expect = 1e-36
Identities = 81/81 (100%)
Strand = Plus / Plus
Query: 594 agcctggggaggagcttctgcctaaggatgccagtgggaaagttatttttgatacggtgg 653
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71752736 agcctggggaggagcttctgcctaaggatgccagtgggaaagttatttttgatacggtgg 71752795
Query: 654 acctgcgtgacacatgggcgg 674
|||||||||||||||||||||
Sbjct: 71752796 acctgcgtgacacatgggcgg 71752816
Score = 161 bits (81), Expect = 1e-36
Identities = 81/81 (100%)
Strand = Plus / Plus
Query: 594 agcctggggaggagcttctgcctaaggatgccagtgggaaagttatttttgatacggtgg 653
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72014499 agcctggggaggagcttctgcctaaggatgccagtgggaaagttatttttgatacggtgg 72014558
Query: 654 acctgcgtgacacatgggcgg 674
|||||||||||||||||||||
Sbjct: 72014559 acctgcgtgacacatgggcgg 72014579
Score = 149 bits (75), Expect = 5e-33
Identities = 90/95 (94%)
Strand = Plus / Plus
Query: 980 ccagcgcaggttgccctgcgctaccagctgcagcggggagtggtggtcctggccaagagc 1039
||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 71926995 ccagcccaggttgccctgcgctaccagctgcagcggggggtggtggccctggccaagagc 71927054
Query: 1040 ttcaatgagcagaggatcaaagagaacttccaggt 1074
|||| |||||||||||| |||||||||||||||||
Sbjct: 71927055 ttcagtgagcagaggatgaaagagaacttccaggt 71927089
Score = 149 bits (75), Expect = 5e-33
Identities = 90/95 (94%)
Strand = Plus / Plus
Query: 980 ccagcgcaggttgccctgcgctaccagctgcagcggggagtggtggtcctggccaagagc 1039
||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 72102716 ccagcccaggttgccctgcgctaccagctgcagcggggggtggtggccctggccaagagc 72102775
Query: 1040 ttcaatgagcagaggatcaaagagaacttccaggt 1074
|||| |||||||||||| |||||||||||||||||
Sbjct: 72102776 ttcagtgagcagaggatgaaagagaacttccaggt 72102810
Score = 147 bits (74), Expect = 2e-32
Identities = 110/122 (90%)
Strand = Plus / Plus
Query: 678 tggagaagtgtaaagatgcaggcttgaccaaatccatcggggtgtccaatttcaatcaca 737
||||||||||||| || ||||| ||||||| |||||||| |||||||| || || |||
Sbjct: 71838774 tggagaagtgtaaggacgcaggactgaccaagtccatcggcgtgtccaactttaaccacc 71838833
Query: 738 agcagctggagatgatcctgaacaagccagggctcaagtacaagcccgtctgcaaccagg 797
| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71838834 aacagctggagaggatcctgaacaagccagggctcaagtacaagcccgtctgcaaccagg 71838893
Query: 798 tg 799
||
Sbjct: 71838894 tg 71838895
Score = 147 bits (74), Expect = 2e-32
Identities = 110/122 (90%)
Strand = Plus / Plus
Query: 678 tggagaagtgtaaagatgcaggcttgaccaaatccatcggggtgtccaatttcaatcaca 737
||||||||||||| || ||||| ||||||| |||||||| |||||||| || || |||
Sbjct: 71870524 tggagaagtgtaaggacgcaggactgaccaagtccatcggcgtgtccaactttaaccacc 71870583
Query: 738 agcagctggagatgatcctgaacaagccagggctcaagtacaagcccgtctgcaaccagg 797
| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71870584 aacagctggagaggatcctgaacaagccagggctcaagtacaagcccgtctgcaaccagg 71870643
Query: 798 tg 799
||
Sbjct: 71870644 tg 71870645
Score = 147 bits (74), Expect = 2e-32
Identities = 110/122 (90%)
Strand = Plus / Plus
Query: 678 tggagaagtgtaaagatgcaggcttgaccaaatccatcggggtgtccaatttcaatcaca 737
||||||||||||| || ||||| ||||||| |||||||| |||||||| || || |||
Sbjct: 71889040 tggagaagtgtaaggacgcaggactgaccaagtccatcggcgtgtccaactttaaccacc 71889099
Query: 738 agcagctggagatgatcctgaacaagccagggctcaagtacaagcccgtctgcaaccagg 797
| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71889100 aacagctggagaggatcctgaacaagccagggctcaagtacaagcccgtctgcaaccagg 71889159
Query: 798 tg 799
||
Sbjct: 71889160 tg 71889161
Score = 147 bits (74), Expect = 2e-32
Identities = 110/122 (90%)
Strand = Plus / Plus
Query: 678 tggagaagtgtaaagatgcaggcttgaccaaatccatcggggtgtccaatttcaatcaca 737
||||||||||||| || ||||| ||||||| |||||||| |||||||| || || |||
Sbjct: 72046223 tggagaagtgtaaggacgcaggactgaccaagtccatcggcgtgtccaactttaaccacc 72046282
Query: 738 agcagctggagatgatcctgaacaagccagggctcaagtacaagcccgtctgcaaccagg 797
| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72046283 aacagctggagaggatcctgaacaagccagggctcaagtacaagcccgtctgcaaccagg 72046342
Query: 798 tg 799
||
Sbjct: 72046343 tg 72046344
Score = 147 bits (74), Expect = 2e-32
Identities = 110/122 (90%)
Strand = Plus / Plus
Query: 678 tggagaagtgtaaagatgcaggcttgaccaaatccatcggggtgtccaatttcaatcaca 737
||||||||||||| || ||||| ||||||| |||||||| |||||||| || || |||
Sbjct: 72064735 tggagaagtgtaaggacgcaggactgaccaagtccatcggcgtgtccaactttaaccacc 72064794
Query: 738 agcagctggagatgatcctgaacaagccagggctcaagtacaagcccgtctgcaaccagg 797
| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72064795 aacagctggagaggatcctgaacaagccagggctcaagtacaagcccgtctgcaaccagg 72064854
Query: 798 tg 799
||
Sbjct: 72064855 tg 72064856
Score = 135 bits (68), Expect = 7e-29
Identities = 71/72 (98%)
Strand = Plus / Plus
Query: 1069 ccaggtttttgactttgaattgcctccagaagatatgaaaacaatcgatggcctcaacca 1128
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71845707 ccaggtttttaactttgaattgcctccagaagatatgaaaacaatcgatggcctcaacca 71845766
Query: 1129 aaatttaagata 1140
||||||||||||
Sbjct: 71845767 aaatttaagata 71845778
Score = 115 bits (58), Expect = 6e-23
Identities = 82/90 (91%)
Strand = Plus / Plus
Query: 710 tccatcggggtgtccaatttcaatcacaagcagctggagatgatcctgaacaagccaggg 769
|||||||| |||||||| || || |||||||||||||| |||| ||||||||||||||
Sbjct: 71921328 tccatcggtgtgtccaactttaactgcaagcagctggagaggatcttgaacaagccaggg 71921387
Query: 770 ctcaagtacaagcccgtctgcaaccaggtg 799
||||||||||||||||||||||||||||||
Sbjct: 71921388 ctcaagtacaagcccgtctgcaaccaggtg 71921417
Score = 115 bits (58), Expect = 6e-23
Identities = 82/90 (91%)
Strand = Plus / Plus
Query: 710 tccatcggggtgtccaatttcaatcacaagcagctggagatgatcctgaacaagccaggg 769
|||||||| |||||||| || || |||||||||||||| |||| ||||||||||||||
Sbjct: 72097056 tccatcggtgtgtccaactttaactgcaagcagctggagaggatcttgaacaagccaggg 72097115
Query: 770 ctcaagtacaagcccgtctgcaaccaggtg 799
||||||||||||||||||||||||||||||
Sbjct: 72097116 ctcaagtacaagcccgtctgcaaccaggtg 72097145
Score = 75.8 bits (38), Expect = 5e-11
Identities = 86/102 (84%)
Strand = Plus / Plus
Query: 794 caggtggaatgccacccttacctcaatcagagcaaacttctggagttttgcaagtccaag 853
||||||||||| || ||||||||||| |||||||| || |||| || |||||||| ||
Sbjct: 71842676 caggtggaatgtcatccttacctcaaccagagcaagctgttggatttctgcaagtcaaaa 71842735
Query: 854 gacatcgttctagttgcctatagtgcactgggatcccaaaga 895
|| ||| ||| |||||||||| ||| |||||||||||||||
Sbjct: 71842736 gatatcattccagttgcctattctgctctgggatcccaaaga 71842777
Score = 73.8 bits (37), Expect = 2e-10
Identities = 46/49 (93%)
Strand = Plus / Plus
Query: 990 ttgccctgcgctaccagctgcagcggggagtggtggtcctggccaagag 1038
||||||| ||||||||||||||||| ||||| |||||||||||||||||
Sbjct: 71843770 ttgcccttcgctaccagctgcagcgtggagttgtggtcctggccaagag 71843818
Score = 73.8 bits (37), Expect = 2e-10
Identities = 55/61 (90%)
Strand = Plus / Plus
Query: 1066 cttccaggtttttgactttgaattgcctccagaagatatgaaaacaatcgatggcctcaa 1125
||||||||||||||||||||||||| | ||||||| |||||| |||| |||||||||||
Sbjct: 71895315 cttccaggtttttgactttgaattgaccacagaagacatgaaagcaattgatggcctcaa 71895374
Query: 1126 c 1126
|
Sbjct: 71895375 c 71895375
Score = 73.8 bits (37), Expect = 2e-10
Identities = 55/61 (90%)
Strand = Plus / Plus
Query: 1066 cttccaggtttttgactttgaattgcctccagaagatatgaaaacaatcgatggcctcaa 1125
||||||||||||||||||||||||| | ||||||| |||||| |||| |||||||||||
Sbjct: 72071007 cttccaggtttttgactttgaattgaccacagaagacatgaaagcaattgatggcctcaa 72071066
Query: 1126 c 1126
|
Sbjct: 72071067 c 72071067
Score = 65.9 bits (33), Expect = 5e-08
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 998 cgctaccagctgcagcggggagtggtggtcctggccaagag 1038
||||||||||||||||| ||||| |||||||||||||||||
Sbjct: 71892829 cgctaccagctgcagcgtggagttgtggtcctggccaagag 71892869
Score = 65.9 bits (33), Expect = 5e-08
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 998 cgctaccagctgcagcggggagtggtggtcctggccaagag 1038
||||||||||||||||| ||||| |||||||||||||||||
Sbjct: 72068523 cgctaccagctgcagcgtggagttgtggtcctggccaagag 72068563
>Sscrofa_Chr18
|| Length = 61220071
Score = 65.9 bits (33), Expect = 5e-08
Identities = 66/77 (85%)
Strand = Plus / Minus
Query: 722 tccaatttcaatcacaagcagctggagatgatcctgaacaagccagggctcaagtacaag 781
||||||||||| | | |||||||||| | ||||||||||| ||||| |||||||| |||
Sbjct: 12091611 tccaatttcaaccgtaggcagctggagctcatcctgaacaaaccaggactcaagtataag 12091552
Query: 782 cccgtctgcaaccaggt 798
|| ||| ||||||||||
Sbjct: 12091551 ccagtcagcaaccaggt 12091535
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 40,519,825
Number of extensions: 313
Number of successful extensions: 313
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 313
Number of HSP's successfully gapped: 35
Length of query: 1329
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 1308
Effective length of database: 2,808,413,156
Effective search space: 3673404408048
Effective search space used: 3673404408048
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)