Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002113
(993 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001159696.1| prostaglandin F synthase 2 [Bos taurus]. 287 3e-97
Alignment gi|XP_002692229.1| PREDICTED: aldo-keto reductase family 1, mem... 292 4e-97
Alignment gi|NP_001161132.1| placental and ovary 20alpha hydroxysteroid d... 287 5e-96
Alignment gi|NP_001193716.1| aldo-keto reductase family 1, member C1 (dih... 286 6e-96
Alignment gi|NP_851370.1| dihydrodiol dehydrogenase 3 [Bos taurus]. 283 1e-95
Alignment gi|NP_001030444.1| aldo-keto reductase family 1 member C3 -like... 280 9e-95
Alignment gi|XP_583064.4| PREDICTED: prostaglandin F synthase 2-like [Bos... 283 2e-94
Alignment gi|XP_002692251.1| PREDICTED: prostaglandin F synthase 2-like [... 278 6e-93
Alignment gi|NP_001159697.1| dihydrodiol dehydrogenase 3 [Bos taurus]. 273 3e-89
Alignment gi|NP_001159695.1| aldo-keto reductase family 1, member C1-like... 271 7e-89
>ref|NP_001159696.1| prostaglandin F synthase 2 [Bos taurus].
Length = 323
Score = 287 bits (735), Expect(2) = 3e-97
Identities = 135/186 (72%), Positives = 162/186 (87%)
Frame = +3
Query: 231 SRCVKLNDGHLMPVLGLGTLVSEGVPKSKAGEATRVAIEVGYRHIDAAYVYENEEEVGSA 410
S+ VKLNDGH +PVLG GT E VPKS+A EAT+ AIEVG+RH+D+A++Y+NEE+VG A
Sbjct: 5 SQRVKLNDGHFIPVLGFGTYAPEEVPKSEALEATKFAIEVGFRHVDSAHLYQNEEQVGQA 64
Query: 411 LREKIADGTVKREELFYTTKLWATFFRPELVRPALERSLKKLRLDYVDLFIIHVPITMKP 590
+R KIADGTVKRE++FYT+KLW +PELVRPALE+SL+ L+LDYVDL+IIH P+++KP
Sbjct: 65 IRSKIADGTVKREDIFYTSKLWCNSLQPELVRPALEKSLQNLQLDYVDLYIIHSPVSLKP 124
Query: 591 GEELLPKDASGKVIFDTVDLRDTWAALEKCKDAGLTKSIGVSNFNHKQLEMILNKPGLKY 770
G + +PKD SGK+IFD+VDL TW ALEKCKDAGLTKSIGVSNFNHKQLE ILNKPGLKY
Sbjct: 125 GNKFVPKDESGKLIFDSVDLCHTWEALEKCKDAGLTKSIGVSNFNHKQLEKILNKPGLKY 184
Query: 771 KPVCNQ 788
KPVCNQ
Sbjct: 185 KPVCNQ 190
Score = 87.4 bits (215), Expect(2) = 3e-97
Identities = 44/58 (75%), Positives = 50/58 (86%)
Frame = +1
Query: 790 VEESNPYLLEDPVLNAIAKKHNRSPAQVALRYQLQRGVVVLAKSFNEQRIKENFQVQD 963
V +NP LLEDPVL AIAKKH ++PA VALRYQ+QRGVVVLAKSFN++RIKEN QV D
Sbjct: 228 VNSNNPVLLEDPVLCAIAKKHKQTPALVALRYQVQRGVVVLAKSFNKKRIKENMQVFD 285
>ref|XP_002692229.1| PREDICTED: aldo-keto reductase family 1, member C3 (3-alpha
hydroxysteroid dehydrogenase, type II)-like [Bos
taurus].
Length = 323
Score = 292 bits (747), Expect(2) = 4e-97
Identities = 141/183 (77%), Positives = 156/183 (85%)
Frame = +3
Query: 240 VKLNDGHLMPVLGLGTLVSEGVPKSKAGEATRVAIEVGYRHIDAAYVYENEEEVGSALRE 419
VKLNDGH +PVLG GT V VPK +A E TR AIEVG+RHID AYVY+NEE VG A+R
Sbjct: 8 VKLNDGHFIPVLGFGTAVPPEVPKREALEVTRFAIEVGFRHIDCAYVYKNEEHVGQAIRS 67
Query: 420 KIADGTVKREELFYTTKLWATFFRPELVRPALERSLKKLRLDYVDLFIIHVPITMKPGEE 599
KIADGTVKRE++FYT+KLW TF +PELVRPALE+SLK L+LDYVDL+IIH P+ MKPGEE
Sbjct: 68 KIADGTVKREDIFYTSKLWCTFHQPELVRPALEKSLKNLQLDYVDLYIIHFPLAMKPGEE 127
Query: 600 LLPKDASGKVIFDTVDLRDTWAALEKCKDAGLTKSIGVSNFNHKQLEMILNKPGLKYKPV 779
L PKD +GK+IFD VDL TW ALEKCKDAGLTKSIGVSNFN KQLE ILNKPGLKYKPV
Sbjct: 128 LFPKDENGKLIFDLVDLCHTWEALEKCKDAGLTKSIGVSNFNRKQLEKILNKPGLKYKPV 187
Query: 780 CNQ 788
CNQ
Sbjct: 188 CNQ 190
Score = 82.0 bits (201), Expect(2) = 4e-97
Identities = 41/58 (70%), Positives = 49/58 (84%)
Frame = +1
Query: 790 VEESNPYLLEDPVLNAIAKKHNRSPAQVALRYQLQRGVVVLAKSFNEQRIKENFQVQD 963
V ++P LLEDPVL AIAKKH ++PA VAL YQ+QRGVVVLAKS+N++RIKEN QV D
Sbjct: 228 VNPNHPVLLEDPVLCAIAKKHKQTPALVALHYQVQRGVVVLAKSYNKKRIKENIQVFD 285
>ref|NP_001161132.1| placental and ovary 20alpha hydroxysteroid dehydrogenase protein
[Bos taurus].
Length = 323
Score = 287 bits (735), Expect(2) = 5e-96
Identities = 134/183 (73%), Positives = 159/183 (86%)
Frame = +3
Query: 240 VKLNDGHLMPVLGLGTLVSEGVPKSKAGEATRVAIEVGYRHIDAAYVYENEEEVGSALRE 419
VKLNDGH +P+LG GT E VPKS+A E T++AIEVG+RHID A++Y+NE +VG A+R
Sbjct: 8 VKLNDGHFIPILGFGTYAPEEVPKSEALEITQLAIEVGFRHIDCAHLYQNERQVGQAIRS 67
Query: 420 KIADGTVKREELFYTTKLWATFFRPELVRPALERSLKKLRLDYVDLFIIHVPITMKPGEE 599
KIADGTVKRE++FYT+KLW+T +PELVRPALE+SLK L+LDYVDL+IIH P+ +KPGEE
Sbjct: 68 KIADGTVKREDIFYTSKLWSTCLQPELVRPALEKSLKNLQLDYVDLYIIHFPLALKPGEE 127
Query: 600 LLPKDASGKVIFDTVDLRDTWAALEKCKDAGLTKSIGVSNFNHKQLEMILNKPGLKYKPV 779
L PKD +GK+I+D+VD TW ALEKCKDAGLTKSIGVSNFNHKQLE ILNKPGLKYKPV
Sbjct: 128 LFPKDENGKIIYDSVDFCRTWEALEKCKDAGLTKSIGVSNFNHKQLEKILNKPGLKYKPV 187
Query: 780 CNQ 788
CNQ
Sbjct: 188 CNQ 190
Score = 83.2 bits (204), Expect(2) = 5e-96
Identities = 42/58 (72%), Positives = 48/58 (82%)
Frame = +1
Query: 790 VEESNPYLLEDPVLNAIAKKHNRSPAQVALRYQLQRGVVVLAKSFNEQRIKENFQVQD 963
V + P LLEDPVL AIAKKH ++PA VALRYQ+QRGVVVLAKS+N +RIKEN QV D
Sbjct: 228 VNPNYPILLEDPVLCAIAKKHKQTPALVALRYQIQRGVVVLAKSYNRKRIKENMQVLD 285
>ref|NP_001193716.1| aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase
1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)-like
[Bos taurus].
Length = 311
Score = 286 bits (731), Expect(2) = 6e-96
Identities = 136/186 (73%), Positives = 158/186 (84%)
Frame = +3
Query: 231 SRCVKLNDGHLMPVLGLGTLVSEGVPKSKAGEATRVAIEVGYRHIDAAYVYENEEEVGSA 410
S+ VKLNDGH +PVLG GT K +A E T+ AIEVG+RH+D A+VY+NEE+VG A
Sbjct: 5 SQKVKLNDGHFIPVLGFGTYAPPEAAKREALEITKFAIEVGFRHVDCAHVYQNEEQVGQA 64
Query: 411 LREKIADGTVKREELFYTTKLWATFFRPELVRPALERSLKKLRLDYVDLFIIHVPITMKP 590
+R KIADGTVKRE++FYT+KLW T RPELVRPALE+SLK L+LDYVDL+IIH+P+ +KP
Sbjct: 65 IRSKIADGTVKREDIFYTSKLWLTSLRPELVRPALEKSLKNLQLDYVDLYIIHIPVALKP 124
Query: 591 GEELLPKDASGKVIFDTVDLRDTWAALEKCKDAGLTKSIGVSNFNHKQLEMILNKPGLKY 770
GEEL PKD +GK+IFD+VDL TW ALEKCKDAGLTKSIGVSNFNHKQLE ILNKPGLKY
Sbjct: 125 GEELFPKDENGKLIFDSVDLCLTWEALEKCKDAGLTKSIGVSNFNHKQLEKILNKPGLKY 184
Query: 771 KPVCNQ 788
KPVCNQ
Sbjct: 185 KPVCNQ 190
Score = 84.3 bits (207), Expect(2) = 6e-96
Identities = 42/67 (62%), Positives = 54/67 (80%)
Frame = +1
Query: 790 VEESNPYLLEDPVLNAIAKKHNRSPAQVALRYQLQRGVVVLAKSFNEQRIKENFQVQDKQ 969
V ++P LLEDPVL+AIA+KH ++PA VALRYQ+QRGVVVL KSFN++R+KEN QV +
Sbjct: 228 VNLNHPILLEDPVLSAIAQKHKQTPALVALRYQIQRGVVVLTKSFNKKRVKENIQVMMSE 287
Query: 970 CLCRELL 990
+ R LL
Sbjct: 288 TVGRGLL 294
>ref|NP_851370.1| dihydrodiol dehydrogenase 3 [Bos taurus].
Length = 323
Score = 283 bits (724), Expect(2) = 1e-95
Identities = 134/183 (73%), Positives = 155/183 (84%)
Frame = +3
Query: 240 VKLNDGHLMPVLGLGTLVSEGVPKSKAGEATRVAIEVGYRHIDAAYVYENEEEVGSALRE 419
VKLNDGH +PVLG GT VPKS+A E T+ AIE G+RHID+A++Y+NEE+VG A+R
Sbjct: 8 VKLNDGHFIPVLGFGTFAPREVPKSEALEVTKFAIEAGFRHIDSAHLYQNEEQVGQAIRS 67
Query: 420 KIADGTVKREELFYTTKLWATFFRPELVRPALERSLKKLRLDYVDLFIIHVPITMKPGEE 599
KIADGTVKRE++FYT+KLW+T RPELVRPALE+SL L+LDYVDL+IIH P+ +KPGE
Sbjct: 68 KIADGTVKREDIFYTSKLWSTSLRPELVRPALEKSLNNLQLDYVDLYIIHFPVALKPGET 127
Query: 600 LLPKDASGKVIFDTVDLRDTWAALEKCKDAGLTKSIGVSNFNHKQLEMILNKPGLKYKPV 779
L P D +GK IFD+VDL TW ALEKCKDAGLTKSIGVSNFNHKQLE ILNKPGLKYKPV
Sbjct: 128 LFPTDENGKPIFDSVDLCRTWEALEKCKDAGLTKSIGVSNFNHKQLEKILNKPGLKYKPV 187
Query: 780 CNQ 788
CNQ
Sbjct: 188 CNQ 190
Score = 85.9 bits (211), Expect(2) = 1e-95
Identities = 42/58 (72%), Positives = 51/58 (87%)
Frame = +1
Query: 790 VEESNPYLLEDPVLNAIAKKHNRSPAQVALRYQLQRGVVVLAKSFNEQRIKENFQVQD 963
V + P+LLEDPVL+AIAKKH ++PA VALRYQ+QRGVVVLAKS+N++RIKEN QV D
Sbjct: 228 VNPNLPFLLEDPVLSAIAKKHRQTPALVALRYQIQRGVVVLAKSYNKKRIKENIQVFD 285
>ref|NP_001030444.1| aldo-keto reductase family 1 member C3 -like [Bos taurus].
Length = 323
Score = 280 bits (717), Expect(2) = 9e-95
Identities = 133/186 (71%), Positives = 155/186 (83%)
Frame = +3
Query: 231 SRCVKLNDGHLMPVLGLGTLVSEGVPKSKAGEATRVAIEVGYRHIDAAYVYENEEEVGSA 410
S+ VKLNDGH +P LG GT VPKS+A E T+ AIE G+RHID+AY Y+NEE+VG
Sbjct: 5 SQRVKLNDGHFIPALGFGTGAPPEVPKSEAVEVTKFAIEAGFRHIDSAYTYQNEEQVGQT 64
Query: 411 LREKIADGTVKREELFYTTKLWATFFRPELVRPALERSLKKLRLDYVDLFIIHVPITMKP 590
+R KIADGTVKRE++FYT+K+W+TF RPELVRPALE+SLK L+LDYVDL+IIH P+ + P
Sbjct: 65 IRSKIADGTVKREDIFYTSKVWSTFLRPELVRPALEKSLKDLQLDYVDLYIIHQPVALMP 124
Query: 591 GEELLPKDASGKVIFDTVDLRDTWAALEKCKDAGLTKSIGVSNFNHKQLEMILNKPGLKY 770
GE L P D +GK +FD+VDL TW ALEKCKDAGLTKSIGVSNFNHKQLE ILNKPGLKY
Sbjct: 125 GETLFPTDENGKPMFDSVDLCRTWEALEKCKDAGLTKSIGVSNFNHKQLEKILNKPGLKY 184
Query: 771 KPVCNQ 788
KPVCNQ
Sbjct: 185 KPVCNQ 190
Score = 85.9 bits (211), Expect(2) = 9e-95
Identities = 42/58 (72%), Positives = 51/58 (87%)
Frame = +1
Query: 790 VEESNPYLLEDPVLNAIAKKHNRSPAQVALRYQLQRGVVVLAKSFNEQRIKENFQVQD 963
V + P+LLEDPVL+AIAKKH ++PA VALRYQ+QRGVVVLAKS+N++RIKEN QV D
Sbjct: 228 VNPNLPFLLEDPVLSAIAKKHKQTPALVALRYQIQRGVVVLAKSYNKKRIKENIQVFD 285
>ref|XP_583064.4| PREDICTED: prostaglandin F synthase 2-like [Bos taurus].
Length = 323
Score = 283 bits (724), Expect(2) = 2e-94
Identities = 133/183 (72%), Positives = 156/183 (85%)
Frame = +3
Query: 240 VKLNDGHLMPVLGLGTLVSEGVPKSKAGEATRVAIEVGYRHIDAAYVYENEEEVGSALRE 419
VKLNDGH +P+LG GT E VPKS+A E TR AIEVG+RHID+A+ Y NEE+VG A+R
Sbjct: 8 VKLNDGHFIPILGFGTYTPEEVPKSEALEVTRFAIEVGFRHIDSAHAYRNEEQVGQAIRS 67
Query: 420 KIADGTVKREELFYTTKLWATFFRPELVRPALERSLKKLRLDYVDLFIIHVPITMKPGEE 599
KIADGTVKRE++FYT+KLW+T +PELV+ ALE+SLK L+LDYVDL++IH P+ +KPGEE
Sbjct: 68 KIADGTVKREDIFYTSKLWSTSLQPELVQSALEKSLKSLQLDYVDLYLIHTPVPLKPGEE 127
Query: 600 LLPKDASGKVIFDTVDLRDTWAALEKCKDAGLTKSIGVSNFNHKQLEMILNKPGLKYKPV 779
+LP GK+I D+VDLR TW ALEKCKDAGLTKSIGVSNFNHKQLE ILNKPGLKYKPV
Sbjct: 128 ILPTGEDGKLILDSVDLRHTWEALEKCKDAGLTKSIGVSNFNHKQLEKILNKPGLKYKPV 187
Query: 780 CNQ 788
CNQ
Sbjct: 188 CNQ 190
Score = 82.0 bits (201), Expect(2) = 2e-94
Identities = 41/58 (70%), Positives = 49/58 (84%)
Frame = +1
Query: 790 VEESNPYLLEDPVLNAIAKKHNRSPAQVALRYQLQRGVVVLAKSFNEQRIKENFQVQD 963
V + P LLEDPVL AIAKKH ++PA VALRYQ+QRGVVVLAKS+N++RI+EN QV D
Sbjct: 228 VNPNYPILLEDPVLCAIAKKHKQTPALVALRYQIQRGVVVLAKSYNKKRIRENIQVFD 285
>ref|XP_002692251.1| PREDICTED: prostaglandin F synthase 2-like [Bos taurus].
Length = 344
Score = 278 bits (711), Expect(2) = 6e-93
Identities = 133/186 (71%), Positives = 156/186 (83%)
Frame = +3
Query: 231 SRCVKLNDGHLMPVLGLGTLVSEGVPKSKAGEATRVAIEVGYRHIDAAYVYENEEEVGSA 410
S+ VKLNDGH +PVL GT VPKS+A E TR AIEVG+RHID+A+ Y NEE+VG A
Sbjct: 26 SQKVKLNDGHFIPVLVYGTCAPPEVPKSEALEVTRFAIEVGFRHIDSAHAYRNEEQVGQA 85
Query: 411 LREKIADGTVKREELFYTTKLWATFFRPELVRPALERSLKKLRLDYVDLFIIHVPITMKP 590
+R KIADGTVKRE++FYT+KLW+T +PELV+ ALE+SLK L+LDYVDL++IH P+ +KP
Sbjct: 86 IRSKIADGTVKREDIFYTSKLWSTSLQPELVQSALEKSLKSLQLDYVDLYLIHTPVPLKP 145
Query: 591 GEELLPKDASGKVIFDTVDLRDTWAALEKCKDAGLTKSIGVSNFNHKQLEMILNKPGLKY 770
GEE+LP GK+I D+VDLR TW ALEKCKDAGLTKSIGVSNFNHKQLE ILNKPGLKY
Sbjct: 146 GEEILPTGEDGKLILDSVDLRHTWEALEKCKDAGLTKSIGVSNFNHKQLEKILNKPGLKY 205
Query: 771 KPVCNQ 788
KPVCNQ
Sbjct: 206 KPVCNQ 211
Score = 82.0 bits (201), Expect(2) = 6e-93
Identities = 41/58 (70%), Positives = 49/58 (84%)
Frame = +1
Query: 790 VEESNPYLLEDPVLNAIAKKHNRSPAQVALRYQLQRGVVVLAKSFNEQRIKENFQVQD 963
V + P LLEDPVL AIAKKH ++PA VALRYQ+QRGVVVLAKS+N++RI+EN QV D
Sbjct: 249 VNPNYPILLEDPVLCAIAKKHKQTPALVALRYQIQRGVVVLAKSYNKKRIRENIQVFD 306
>ref|NP_001159697.1| dihydrodiol dehydrogenase 3 [Bos taurus].
Length = 323
Score = 273 bits (699), Expect(2) = 3e-89
Identities = 131/183 (71%), Positives = 150/183 (81%)
Frame = +3
Query: 240 VKLNDGHLMPVLGLGTLVSEGVPKSKAGEATRVAIEVGYRHIDAAYVYENEEEVGSALRE 419
VKLNDGH +PVLG GT V K +A E T AIEVG+RHID A+ Y+NEEE+G +R
Sbjct: 8 VKLNDGHFIPVLGFGTYAPPEVAKKEALEFTPFAIEVGFRHIDCAHAYQNEEEIGQVIRS 67
Query: 420 KIADGTVKREELFYTTKLWATFFRPELVRPALERSLKKLRLDYVDLFIIHVPITMKPGEE 599
KIADGTVKRE++F T+KLW T RPELVRPALE+SLK L+LDYVDL+I+H P+ +KPGEE
Sbjct: 68 KIADGTVKREDIFCTSKLWLTSLRPELVRPALEKSLKNLQLDYVDLYIMHYPMALKPGEE 127
Query: 600 LLPKDASGKVIFDTVDLRDTWAALEKCKDAGLTKSIGVSNFNHKQLEMILNKPGLKYKPV 779
L PKD +GK+IFD+VD TW ALEKCKDAGL KSIGVSNFNHKQLE ILNKPGLKYKPV
Sbjct: 128 LFPKDENGKLIFDSVDFCRTWEALEKCKDAGLAKSIGVSNFNHKQLERILNKPGLKYKPV 187
Query: 780 CNQ 788
CNQ
Sbjct: 188 CNQ 190
Score = 74.3 bits (181), Expect(2) = 3e-89
Identities = 36/58 (62%), Positives = 48/58 (82%)
Frame = +1
Query: 790 VEESNPYLLEDPVLNAIAKKHNRSPAQVALRYQLQRGVVVLAKSFNEQRIKENFQVQD 963
V +++P LLEDPVL+AI++KH ++ A +ALRYQ+QRGVVVLAK N++ IKEN QV D
Sbjct: 228 VNQNHPVLLEDPVLSAISQKHKKTAALIALRYQIQRGVVVLAKGNNKKWIKENMQVFD 285
>ref|NP_001159695.1| aldo-keto reductase family 1, member C1-like [Bos taurus].
Length = 323
Score = 271 bits (694), Expect(2) = 7e-89
Identities = 130/183 (71%), Positives = 151/183 (82%)
Frame = +3
Query: 240 VKLNDGHLMPVLGLGTLVSEGVPKSKAGEATRVAIEVGYRHIDAAYVYENEEEVGSALRE 419
VKLNDGH +PVLG GT + V K A E T AIEVG+RHID A+ Y+NEE++G A+R
Sbjct: 8 VKLNDGHFIPVLGFGTYAPQEVAKRDALEFTPFAIEVGFRHIDCAHAYQNEEQIGQAIRS 67
Query: 420 KIADGTVKREELFYTTKLWATFFRPELVRPALERSLKKLRLDYVDLFIIHVPITMKPGEE 599
K+ADGTVKRE++F T+KLW T FRPELVRPALE+SLK L+LDYVDL+I+H P+ +KPGEE
Sbjct: 68 KMADGTVKREDIFCTSKLWCTSFRPELVRPALEKSLKSLQLDYVDLYIMHYPLALKPGEE 127
Query: 600 LLPKDASGKVIFDTVDLRDTWAALEKCKDAGLTKSIGVSNFNHKQLEMILNKPGLKYKPV 779
L PKD +GK+I D+VD TW ALEKCKDAGL KSIGVSNFNHKQLE ILNKPGLKYKPV
Sbjct: 128 LYPKDENGKLIADSVDFCLTWEALEKCKDAGLAKSIGVSNFNHKQLEKILNKPGLKYKPV 187
Query: 780 CNQ 788
CNQ
Sbjct: 188 CNQ 190
Score = 75.1 bits (183), Expect(2) = 7e-89
Identities = 38/58 (65%), Positives = 47/58 (81%)
Frame = +1
Query: 790 VEESNPYLLEDPVLNAIAKKHNRSPAQVALRYQLQRGVVVLAKSFNEQRIKENFQVQD 963
V ++P LLEDPVL+AIA+KH ++ A VALRYQ+QRGVVVLAK N++ IKEN QV D
Sbjct: 228 VNPNHPVLLEDPVLSAIAQKHKKTAALVALRYQIQRGVVVLAKGNNKEWIKENMQVFD 285
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 38,607,254
Number of extensions: 1032363
Number of successful extensions: 3002
Number of sequences better than 1.0e-05: 28
Number of HSP's gapped: 2994
Number of HSP's successfully gapped: 56
Length of query: 331
Length of database: 17,681,374
Length adjustment: 103
Effective length of query: 228
Effective length of database: 14,273,310
Effective search space: 3254314680
Effective search space used: 3254314680
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002113
(993 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001012344.1| aldo-keto reductase family 1 member C21 [Can... 258 1e-88
Alignment gi|XP_539827.2| PREDICTED: similar to 3-oxo-5-beta-steroid 4-de... 228 7e-75
Alignment gi|XP_853331.1| PREDICTED: similar to 3-oxo-5-beta-steroid 4-de... 228 7e-75
Alignment gi|XP_539451.1| PREDICTED: similar to Aldose reductase (AR) (Al... 194 5e-62
Alignment gi|XP_848401.1| PREDICTED: similar to Aldose reductase (AR) (Al... 194 5e-62
Alignment gi|XP_862592.1| PREDICTED: similar to Aldose reductase (AR) (Al... 191 7e-56
Alignment gi|XP_862563.1| PREDICTED: similar to Aldose reductase (AR) (Al... 161 3e-52
Alignment gi|XP_862630.1| PREDICTED: similar to Aldose reductase (AR) (Al... 142 1e-46
Alignment gi|XP_851036.1| PREDICTED: similar to aldo-keto reductase famil... 181 1e-45
Alignment gi|XP_851387.1| PREDICTED: similar to 3-oxo-5-beta-steroid 4-de... 173 2e-43
>ref|NP_001012344.1| aldo-keto reductase family 1 member C21 [Canis lupus familiaris].
Length = 324
Score = 258 bits (658), Expect(2) = 1e-88
Identities = 123/185 (66%), Positives = 146/185 (78%)
Frame = +3
Query: 234 RCVKLNDGHLMPVLGLGTLVSEGVPKSKAGEATRVAIEVGYRHIDAAYVYENEEEVGSAL 413
R VKLNDG MP LG GT VPK++ EA + AI+VGYRH D+AY+Y NEEE+G A+
Sbjct: 7 RSVKLNDGLSMPPLGFGTSAPSKVPKTEVEEAVKRAIDVGYRHFDSAYMYLNEEEIGRAI 66
Query: 414 REKIADGTVKREELFYTTKLWATFFRPELVRPALERSLKKLRLDYVDLFIIHVPITMKPG 593
+ KIADGTVKRE++FYT+K+W TF RPELV+ LE SLKKL YVDL++IH P+ +KPG
Sbjct: 67 QRKIADGTVKREDIFYTSKVWVTFLRPELVQTNLEMSLKKLGFSYVDLYLIHFPVPLKPG 126
Query: 594 EELLPKDASGKVIFDTVDLRDTWAALEKCKDAGLTKSIGVSNFNHKQLEMILNKPGLKYK 773
EEL PKD GK+IFD VDL TW A+EKCKD+GL KSIGVSNFN +QLE IL+KP LKYK
Sbjct: 127 EELFPKDKDGKIIFDRVDLCATWEAMEKCKDSGLAKSIGVSNFNRRQLERILSKPRLKYK 186
Query: 774 PVCNQ 788
PVCNQ
Sbjct: 187 PVCNQ 191
Score = 88.6 bits (218), Expect(2) = 1e-88
Identities = 43/60 (71%), Positives = 51/60 (85%)
Frame = +1
Query: 790 VEESNPYLLEDPVLNAIAKKHNRSPAQVALRYQLQRGVVVLAKSFNEQRIKENFQVQDKQ 969
V + P LL+DPVLNA+A +H R+PAQVALR+QLQRGVV LAKSFNE+RI+ENFQV D Q
Sbjct: 229 VNQDAPVLLKDPVLNAVAARHGRTPAQVALRFQLQRGVVALAKSFNEKRIRENFQVFDFQ 288
>ref|XP_539827.2| PREDICTED: similar to 3-oxo-5-beta-steroid 4-dehydrogenase
(Delta(4)-3-ketosteroid 5-beta-reductase) (Aldo-keto
reductase family 1 member D1) [Canis familiaris].
Length = 341
Score = 228 bits (582), Expect(2) = 7e-75
Identities = 107/189 (56%), Positives = 144/189 (76%), Gaps = 1/189 (0%)
Frame = +3
Query: 225 ALSRCVKLNDGHLMPVLGLGTLVSEGV-PKSKAGEATRVAIEVGYRHIDAAYVYENEEEV 401
A + + L+DG+ +P++GLGT + PK ++ ++AI+ GYRHID AY+Y+NE EV
Sbjct: 33 AANHRIPLSDGNSIPIIGLGTYSEPKLTPKGTCTKSVKIAIDTGYRHIDGAYIYQNEHEV 92
Query: 402 GSALREKIADGTVKREELFYTTKLWATFFRPELVRPALERSLKKLRLDYVDLFIIHVPIT 581
G A+REKIA+G V+RE++FY KLWAT PE+VRP LE++L L+LDYVDL+II +P+
Sbjct: 93 GEAIREKIAEGKVRREDIFYCGKLWATKHDPEMVRPTLEKTLSVLQLDYVDLYIIEIPMA 152
Query: 582 MKPGEELLPKDASGKVIFDTVDLRDTWAALEKCKDAGLTKSIGVSNFNHKQLEMILNKPG 761
KPG+E+ PKD +GK ++ +L TW ALE CKDAGL KS+GVSNFN +QLE+ILNKPG
Sbjct: 153 FKPGDEIYPKDENGKWLYHKSNLCATWEALEACKDAGLVKSLGVSNFNRRQLELILNKPG 212
Query: 762 LKYKPVCNQ 788
LK+KPV NQ
Sbjct: 213 LKHKPVSNQ 221
Score = 71.6 bits (174), Expect(2) = 7e-75
Identities = 33/58 (56%), Positives = 46/58 (79%)
Frame = +1
Query: 790 VEESNPYLLEDPVLNAIAKKHNRSPAQVALRYQLQRGVVVLAKSFNEQRIKENFQVQD 963
V S+P LL+D +LNA+ KK+ ++ AQ+ LR+ +QRGVVV+ KSFN +RIKENFQ+ D
Sbjct: 259 VNISSPPLLKDELLNALGKKYKKTAAQIVLRFNIQRGVVVIPKSFNPERIKENFQIFD 316
>ref|XP_853331.1| PREDICTED: similar to 3-oxo-5-beta-steroid 4-dehydrogenase
(Delta(4)-3-ketosteroid 5-beta-reductase) (Aldo-keto
reductase family 1 member D1) [Canis familiaris].
Length = 336
Score = 228 bits (582), Expect(2) = 7e-75
Identities = 108/195 (55%), Positives = 147/195 (75%), Gaps = 1/195 (0%)
Frame = +3
Query: 207 GLWIKMALSRCVKLNDGHLMPVLGLGTLVSEGV-PKSKAGEATRVAIEVGYRHIDAAYVY 383
G+++ A R + L+DG+ +P++GLGT + PK ++ ++AI+ GYRHID AY+Y
Sbjct: 23 GMYLSAANHR-IPLSDGNSIPIIGLGTYSEPKLTPKGTCAKSVKIAIDTGYRHIDGAYIY 81
Query: 384 ENEEEVGSALREKIADGTVKREELFYTTKLWATFFRPELVRPALERSLKKLRLDYVDLFI 563
+NE EVG A+REKIA+G V+RE++FY KLWAT PE+VRP LE++L L+LDYVDL+I
Sbjct: 82 QNEHEVGEAIREKIAEGKVQREDIFYCGKLWATKHDPEMVRPTLEKTLSVLQLDYVDLYI 141
Query: 564 IHVPITMKPGEELLPKDASGKVIFDTVDLRDTWAALEKCKDAGLTKSIGVSNFNHKQLEM 743
I +P+ KPG+E+ PKD +GK ++ +L TW LE CKDAGL KS+GVSNFN +QLE+
Sbjct: 142 IEIPMAFKPGDEIYPKDENGKWLYHKSNLCATWEGLEACKDAGLVKSLGVSNFNRRQLEL 201
Query: 744 ILNKPGLKYKPVCNQ 788
ILNKPGLK+KPV NQ
Sbjct: 202 ILNKPGLKHKPVSNQ 216
Score = 71.6 bits (174), Expect(2) = 7e-75
Identities = 33/58 (56%), Positives = 46/58 (79%)
Frame = +1
Query: 790 VEESNPYLLEDPVLNAIAKKHNRSPAQVALRYQLQRGVVVLAKSFNEQRIKENFQVQD 963
V S+P LL+D +LNA+ KK+ ++ AQ+ LR+ +QRGVVV+ KSFN +RIKENFQ+ D
Sbjct: 254 VNISSPPLLKDELLNALGKKYKKTAAQIVLRFNIQRGVVVIPKSFNPERIKENFQIFD 311
>ref|XP_539451.1| PREDICTED: similar to Aldose reductase (AR) (Aldehyde reductase)
isoform 1 [Canis familiaris].
Length = 316
Score = 194 bits (492), Expect(2) = 5e-62
Identities = 96/181 (53%), Positives = 124/181 (68%)
Frame = +3
Query: 246 LNDGHLMPVLGLGTLVSEGVPKSKAGEATRVAIEVGYRHIDAAYVYENEEEVGSALREKI 425
L +G MPVLGLGT S P K +A +VAI++GYRHID A+VY+NE EVG A++EK+
Sbjct: 7 LCNGAKMPVLGLGTWKS---PPGKVTDAVKVAIDLGYRHIDCAHVYQNENEVGLAIQEKL 63
Query: 426 ADGTVKREELFYTTKLWATFFRPELVRPALERSLKKLRLDYVDLFIIHVPITMKPGEELL 605
+ VKRE+LF +KLW T+ +V+ A +++L L+LDY+DL++IH P K G+E
Sbjct: 64 KEQVVKREDLFVVSKLWCTYHEKSMVKGACQKTLSDLKLDYLDLYLIHWPTGFKAGKEYF 123
Query: 606 PKDASGKVIFDTVDLRDTWAALEKCKDAGLTKSIGVSNFNHKQLEMILNKPGLKYKPVCN 785
P D G VI DTW A+E+ D GL K+IGVSNFNH Q+E ILNKPGLKYKP N
Sbjct: 124 PLDGEGNVIPSDTSFVDTWEAMEQLVDEGLVKAIGVSNFNHLQIEKILNKPGLKYKPAVN 183
Query: 786 Q 788
Q
Sbjct: 184 Q 184
Score = 63.2 bits (152), Expect(2) = 5e-62
Identities = 30/54 (55%), Positives = 40/54 (74%)
Frame = +1
Query: 802 NPYLLEDPVLNAIAKKHNRSPAQVALRYQLQRGVVVLAKSFNEQRIKENFQVQD 963
+P LLEDP + AIA KHN++ AQV +R+ +QR +VV+ KS +RI ENFQV D
Sbjct: 225 DPSLLEDPRIKAIAAKHNKTTAQVLIRFPMQRNLVVIPKSVTPERIAENFQVFD 278
>ref|XP_848401.1| PREDICTED: similar to Aldose reductase (AR) (Aldehyde reductase)
isoform 1 [Canis familiaris].
Length = 316
Score = 194 bits (492), Expect(2) = 5e-62
Identities = 96/181 (53%), Positives = 124/181 (68%)
Frame = +3
Query: 246 LNDGHLMPVLGLGTLVSEGVPKSKAGEATRVAIEVGYRHIDAAYVYENEEEVGSALREKI 425
L +G MPVLGLGT S P K +A +VAI++GYRHID A+VY+NE EVG A++EK+
Sbjct: 7 LCNGAKMPVLGLGTWKS---PPGKVTDAVKVAIDLGYRHIDCAHVYQNENEVGLAIQEKL 63
Query: 426 ADGTVKREELFYTTKLWATFFRPELVRPALERSLKKLRLDYVDLFIIHVPITMKPGEELL 605
+ VKRE+LF +KLW T+ +V+ A +++L L+LDY+DL++IH P K G+E
Sbjct: 64 KEQVVKREDLFVVSKLWCTYHEKSMVKGACQKTLSDLKLDYLDLYLIHWPTGFKAGKEYF 123
Query: 606 PKDASGKVIFDTVDLRDTWAALEKCKDAGLTKSIGVSNFNHKQLEMILNKPGLKYKPVCN 785
P D G VI DTW A+E+ D GL K+IGVSNFNH Q+E ILNKPGLKYKP N
Sbjct: 124 PLDGEGNVIPSDTSFVDTWEAMEQLVDEGLVKAIGVSNFNHLQIEKILNKPGLKYKPAVN 183
Query: 786 Q 788
Q
Sbjct: 184 Q 184
Score = 63.2 bits (152), Expect(2) = 5e-62
Identities = 30/54 (55%), Positives = 40/54 (74%)
Frame = +1
Query: 802 NPYLLEDPVLNAIAKKHNRSPAQVALRYQLQRGVVVLAKSFNEQRIKENFQVQD 963
+P LLEDP + AIA KHN++ AQV +R+ +QR +VV+ KS +RI ENFQV D
Sbjct: 225 DPSLLEDPRIKAIAAKHNKTTAQVLIRFPMQRNLVVIPKSVTPERIAENFQVFD 278
>ref|XP_862592.1| PREDICTED: similar to Aldose reductase (AR) (Aldehyde reductase)
isoform 3 [Canis familiaris].
Length = 257
Score = 191 bits (486), Expect(2) = 7e-56
Identities = 95/181 (52%), Positives = 124/181 (68%)
Frame = +3
Query: 246 LNDGHLMPVLGLGTLVSEGVPKSKAGEATRVAIEVGYRHIDAAYVYENEEEVGSALREKI 425
L +G MPVLGLGT S P K +A +VAI++GYRHID A+VY+NE EVG A++EK+
Sbjct: 7 LCNGAKMPVLGLGTWKS---PPGKVTDAVKVAIDLGYRHIDCAHVYQNENEVGLAIQEKL 63
Query: 426 ADGTVKREELFYTTKLWATFFRPELVRPALERSLKKLRLDYVDLFIIHVPITMKPGEELL 605
+ VKRE+LF +KLW T+ +V+ A +++L L+LDY+DL++IH P K G+E
Sbjct: 64 KEQVVKREDLFVVSKLWCTYHEKSMVKGACQKTLSDLKLDYLDLYLIHWPTGFKAGKEYF 123
Query: 606 PKDASGKVIFDTVDLRDTWAALEKCKDAGLTKSIGVSNFNHKQLEMILNKPGLKYKPVCN 785
P D G VI DTW A+E+ D GL K+IGVSNFNH Q+E ILNKPGLKYKP N
Sbjct: 124 PLDGEGNVIPSDTSFVDTWEAMEQLVDEGLVKAIGVSNFNHLQIEKILNKPGLKYKPAHN 183
Query: 786 Q 788
+
Sbjct: 184 K 184
Score = 45.1 bits (105), Expect(2) = 7e-56
Identities = 20/38 (52%), Positives = 28/38 (73%)
Frame = +1
Query: 850 HNRSPAQVALRYQLQRGVVVLAKSFNEQRIKENFQVQD 963
HN++ AQV +R+ +QR +VV+ KS +RI ENFQV D
Sbjct: 182 HNKTTAQVLIRFPMQRNLVVIPKSVTPERIAENFQVFD 219
>ref|XP_862563.1| PREDICTED: similar to Aldose reductase (AR) (Aldehyde reductase)
isoform 2 [Canis familiaris].
Length = 290
Score = 161 bits (407), Expect(2) = 3e-52
Identities = 86/181 (47%), Positives = 113/181 (62%)
Frame = +3
Query: 246 LNDGHLMPVLGLGTLVSEGVPKSKAGEATRVAIEVGYRHIDAAYVYENEEEVGSALREKI 425
L +G MPVLGLGT S P K +A +VAI++GYRHID A+VY+NE EVG A++EK+
Sbjct: 7 LCNGAKMPVLGLGTWKS---PPGKVTDAVKVAIDLGYRHIDCAHVYQNENEVGLAIQEKL 63
Query: 426 ADGTVKREELFYTTKLWATFFRPELVRPALERSLKKLRLDYVDLFIIHVPITMKPGEELL 605
+ VKRE+LF +KLW T+ +V+ A +++L L+LDY+DL++IH P K
Sbjct: 64 KEQVVKREDLFVVSKLWCTYHEKSMVKGACQKTLSDLKLDYLDLYLIHWPTGFK------ 117
Query: 606 PKDASGKVIFDTVDLRDTWAALEKCKDAGLTKSIGVSNFNHKQLEMILNKPGLKYKPVCN 785
A+E+ D GL K+IGVSNFNH Q+E ILNKPGLKYKP N
Sbjct: 118 --------------------AMEQLVDEGLVKAIGVSNFNHLQIEKILNKPGLKYKPAVN 157
Query: 786 Q 788
Q
Sbjct: 158 Q 158
Score = 63.2 bits (152), Expect(2) = 3e-52
Identities = 30/54 (55%), Positives = 40/54 (74%)
Frame = +1
Query: 802 NPYLLEDPVLNAIAKKHNRSPAQVALRYQLQRGVVVLAKSFNEQRIKENFQVQD 963
+P LLEDP + AIA KHN++ AQV +R+ +QR +VV+ KS +RI ENFQV D
Sbjct: 199 DPSLLEDPRIKAIAAKHNKTTAQVLIRFPMQRNLVVIPKSVTPERIAENFQVFD 252
>ref|XP_862630.1| PREDICTED: similar to Aldose reductase (AR) (Aldehyde reductase)
isoform 5 [Canis familiaris].
Length = 277
Score = 142 bits (359), Expect(2) = 1e-46
Identities = 67/131 (51%), Positives = 89/131 (67%)
Frame = +3
Query: 396 EVGSALREKIADGTVKREELFYTTKLWATFFRPELVRPALERSLKKLRLDYVDLFIIHVP 575
+VG A++EK+ + VKRE+LF +KLW T+ +V+ A +++L L+LDY+DL++IH P
Sbjct: 15 KVGLAIQEKLKEQVVKREDLFVVSKLWCTYHEKSMVKGACQKTLSDLKLDYLDLYLIHWP 74
Query: 576 ITMKPGEELLPKDASGKVIFDTVDLRDTWAALEKCKDAGLTKSIGVSNFNHKQLEMILNK 755
K G+E P D G VI DTW A+E+ D GL K+IGVSNFNH Q+E ILNK
Sbjct: 75 TGFKAGKEYFPLDGEGNVIPSDTSFVDTWEAMEQLVDEGLVKAIGVSNFNHLQIEKILNK 134
Query: 756 PGLKYKPVCNQ 788
PGLKYKP NQ
Sbjct: 135 PGLKYKPAVNQ 145
Score = 63.2 bits (152), Expect(2) = 1e-46
Identities = 30/54 (55%), Positives = 40/54 (74%)
Frame = +1
Query: 802 NPYLLEDPVLNAIAKKHNRSPAQVALRYQLQRGVVVLAKSFNEQRIKENFQVQD 963
+P LLEDP + AIA KHN++ AQV +R+ +QR +VV+ KS +RI ENFQV D
Sbjct: 186 DPSLLEDPRIKAIAAKHNKTTAQVLIRFPMQRNLVVIPKSVTPERIAENFQVFD 239
>ref|XP_851036.1| PREDICTED: similar to aldo-keto reductase family 1, member E1
[Canis familiaris].
Length = 436
Score = 181 bits (458), Expect = 1e-45
Identities = 88/175 (50%), Positives = 116/175 (66%)
Frame = +3
Query: 264 MPVLGLGTLVSEGVPKSKAGEATRVAIEVGYRHIDAAYVYENEEEVGSALREKIADGTVK 443
+P +GLGT + + EA +VAI+ GYRH D AY+Y NE EVG+ + KI +G V+
Sbjct: 4 IPAVGLGTWKAA---PGEVAEAVKVAIDAGYRHFDCAYLYHNESEVGAGIHSKITEGVVR 60
Query: 444 REELFYTTKLWATFFRPELVRPALERSLKKLRLDYVDLFIIHVPITMKPGEELLPKDASG 623
RE+LF +KLW T + LV+ A RSL L LDY+DL+++H P+ K GEE +P D SG
Sbjct: 61 REDLFIVSKLWCTSHKKSLVKAACTRSLTALNLDYLDLYLMHWPMGFKSGEEDVPLDRSG 120
Query: 624 KVIFDTVDLRDTWAALEKCKDAGLTKSIGVSNFNHKQLEMILNKPGLKYKPVCNQ 788
VI D DTW A+E GL K+IGVSNFNHKQL+ +LNKP L++KP+ NQ
Sbjct: 121 MVIASDTDFLDTWEAMEDLVVMGLVKAIGVSNFNHKQLDRLLNKPNLRFKPITNQ 175
Score = 65.9 bits (159), Expect = 6e-11
Identities = 29/54 (53%), Positives = 40/54 (74%)
Frame = +1
Query: 811 LLEDPVLNAIAKKHNRSPAQVALRYQLQRGVVVLAKSFNEQRIKENFQVQDKQC 972
LL+DPV+ +A+KHN+SPAQ+ LR+Q+QR V+V+ KS +RI EN Q K C
Sbjct: 219 LLDDPVIQRVAQKHNKSPAQILLRFQIQRNVIVIPKSVTPKRIIENIQEMGKLC 272
>ref|XP_851387.1| PREDICTED: similar to 3-oxo-5-beta-steroid 4-dehydrogenase
(Delta(4)-3-ketosteroid 5-beta-reductase) (Aldo-keto
reductase family 1 member D1), partial [Canis
familiaris].
Length = 191
Score = 173 bits (439), Expect = 2e-43
Identities = 85/170 (50%), Positives = 118/170 (69%), Gaps = 2/170 (1%)
Frame = +3
Query: 285 TLVSEGVPKSKAGEATRVAIEVGYRHIDAAYVYENEEEVGSALREKIADGTVKREELFYT 464
T +S PK ++ ++AI+ GYRHID AY+Y+NE EVG A+REKIA G V+RE++FY
Sbjct: 17 TPLSFQTPKGTCAKSVKIAIDTGYRHIDGAYIYQNEHEVGEAIREKIAKGKVRREDIFYC 76
Query: 465 TKLWATFFRPELVRPALERSLKKLRLDYVDLFIIHVPITM--KPGEELLPKDASGKVIFD 638
K+ ++ P + S +++LD+VDL ++ P+ KPG+E+ PKD +GK ++
Sbjct: 77 GKVRSSLQSPIPYINSGSGSFAEIKLDFVDLVLVKNPLEQDHKPGDEIYPKDENGKWLYH 136
Query: 639 TVDLRDTWAALEKCKDAGLTKSIGVSNFNHKQLEMILNKPGLKYKPVCNQ 788
+L TW LE CKDAGL KS+GVSNFN +QLE+ILNKPGLK+KPV NQ
Sbjct: 137 KSNLCATWEGLEACKDAGLVKSLGVSNFNRRQLELILNKPGLKHKPVSNQ 186
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 40,266,732
Number of extensions: 1060087
Number of successful extensions: 2905
Number of sequences better than 1.0e-05: 16
Number of HSP's gapped: 2889
Number of HSP's successfully gapped: 29
Length of query: 331
Length of database: 18,874,504
Length adjustment: 103
Effective length of query: 228
Effective length of database: 15,440,896
Effective search space: 3520524288
Effective search space used: 3520524288
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002113
(993 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001344.2| aldo-keto reductase family 1 member C1 [Homo sa... 290 4e-98
Alignment gi|NP_995317.1| aldo-keto reductase family 1 member C2 isoform ... 288 1e-97
Alignment gi|NP_001345.1| aldo-keto reductase family 1 member C2 isoform ... 288 1e-97
Alignment gi|NP_003730.4| aldo-keto reductase family 1 member C3 [Homo sa... 287 6e-97
Alignment gi|NP_001809.3| aldo-keto reductase family 1 member C4 [Homo sa... 279 5e-95
Alignment gi|NP_005980.1| 3-oxo-5-beta-steroid 4-dehydrogenase isoform 1 ... 231 1e-75
Alignment gi|NP_001177836.1| 3-oxo-5-beta-steroid 4-dehydrogenase isoform... 231 2e-75
Alignment gi|NP_001619.1| aldose reductase [Homo sapiens]. 208 8e-66
Alignment gi|NP_064695.3| aldo-keto reductase family 1 member B10 [Homo s... 197 4e-61
Alignment gi|NP_001074007.2| aldo-keto reductase family 1 member B15 [Hom... 177 4e-54
>ref|NP_001344.2| aldo-keto reductase family 1 member C1 [Homo sapiens].
Length = 323
Score = 290 bits (742), Expect(2) = 4e-98
Identities = 135/185 (72%), Positives = 161/185 (87%)
Frame = +3
Query: 234 RCVKLNDGHLMPVLGLGTLVSEGVPKSKAGEATRVAIEVGYRHIDAAYVYENEEEVGSAL 413
+CVKLNDGH MPVLG GT VPKSKA EAT++AIE G+RHID+A++Y NEE+VG A+
Sbjct: 6 QCVKLNDGHFMPVLGFGTYAPAEVPKSKALEATKLAIEAGFRHIDSAHLYNNEEQVGLAI 65
Query: 414 REKIADGTVKREELFYTTKLWATFFRPELVRPALERSLKKLRLDYVDLFIIHVPITMKPG 593
R KIADG+VKRE++FYT+KLW RPELVRPALERSLK L+LDYVDL++IH P+++KPG
Sbjct: 66 RSKIADGSVKREDIFYTSKLWCNSHRPELVRPALERSLKNLQLDYVDLYLIHFPVSVKPG 125
Query: 594 EELLPKDASGKVIFDTVDLRDTWAALEKCKDAGLTKSIGVSNFNHKQLEMILNKPGLKYK 773
EE++PKD +GK++FDTVDL TW A+EKCKDAGL KSIGVSNFN +QLEMILNKPGLKYK
Sbjct: 126 EEVIPKDENGKILFDTVDLCATWEAVEKCKDAGLAKSIGVSNFNRRQLEMILNKPGLKYK 185
Query: 774 PVCNQ 788
PVCNQ
Sbjct: 186 PVCNQ 190
Score = 87.4 bits (215), Expect(2) = 4e-98
Identities = 43/66 (65%), Positives = 54/66 (81%)
Frame = +1
Query: 790 VEESNPYLLEDPVLNAIAKKHNRSPAQVALRYQLQRGVVVLAKSFNEQRIKENFQVQDKQ 969
V+ ++P LLEDPVL A+AKKH R+PA +ALRYQLQRGVVVLAKS+NEQRI++N QV + Q
Sbjct: 228 VDPNSPVLLEDPVLCALAKKHKRTPALIALRYQLQRGVVVLAKSYNEQRIRQNVQVFEFQ 287
Query: 970 CLCREL 987
E+
Sbjct: 288 LTSEEM 293
>ref|NP_995317.1| aldo-keto reductase family 1 member C2 isoform 1 [Homo sapiens].
Length = 323
Score = 288 bits (738), Expect(2) = 1e-97
Identities = 134/185 (72%), Positives = 160/185 (86%)
Frame = +3
Query: 234 RCVKLNDGHLMPVLGLGTLVSEGVPKSKAGEATRVAIEVGYRHIDAAYVYENEEEVGSAL 413
+CVKLNDGH MPVLG GT VPKSKA EA ++AIE G+ HID+A+VY NEE+VG A+
Sbjct: 6 QCVKLNDGHFMPVLGFGTYAPAEVPKSKALEAVKLAIEAGFHHIDSAHVYNNEEQVGLAI 65
Query: 414 REKIADGTVKREELFYTTKLWATFFRPELVRPALERSLKKLRLDYVDLFIIHVPITMKPG 593
R KIADG+VKRE++FYT+KLW+ RPELVRPALERSLK L+LDYVDL++IH P+++KPG
Sbjct: 66 RSKIADGSVKREDIFYTSKLWSNSHRPELVRPALERSLKNLQLDYVDLYLIHFPVSVKPG 125
Query: 594 EELLPKDASGKVIFDTVDLRDTWAALEKCKDAGLTKSIGVSNFNHKQLEMILNKPGLKYK 773
EE++PKD +GK++FDTVDL TW A+EKCKDAGL KSIGVSNFNH+ LEMILNKPGLKYK
Sbjct: 126 EEVIPKDENGKILFDTVDLCATWEAMEKCKDAGLAKSIGVSNFNHRLLEMILNKPGLKYK 185
Query: 774 PVCNQ 788
PVCNQ
Sbjct: 186 PVCNQ 190
Score = 87.4 bits (215), Expect(2) = 1e-97
Identities = 43/66 (65%), Positives = 54/66 (81%)
Frame = +1
Query: 790 VEESNPYLLEDPVLNAIAKKHNRSPAQVALRYQLQRGVVVLAKSFNEQRIKENFQVQDKQ 969
V+ ++P LLEDPVL A+AKKH R+PA +ALRYQLQRGVVVLAKS+NEQRI++N QV + Q
Sbjct: 228 VDPNSPVLLEDPVLCALAKKHKRTPALIALRYQLQRGVVVLAKSYNEQRIRQNVQVFEFQ 287
Query: 970 CLCREL 987
E+
Sbjct: 288 LTSEEM 293
>ref|NP_001345.1| aldo-keto reductase family 1 member C2 isoform 1 [Homo sapiens].
Length = 323
Score = 288 bits (738), Expect(2) = 1e-97
Identities = 134/185 (72%), Positives = 160/185 (86%)
Frame = +3
Query: 234 RCVKLNDGHLMPVLGLGTLVSEGVPKSKAGEATRVAIEVGYRHIDAAYVYENEEEVGSAL 413
+CVKLNDGH MPVLG GT VPKSKA EA ++AIE G+ HID+A+VY NEE+VG A+
Sbjct: 6 QCVKLNDGHFMPVLGFGTYAPAEVPKSKALEAVKLAIEAGFHHIDSAHVYNNEEQVGLAI 65
Query: 414 REKIADGTVKREELFYTTKLWATFFRPELVRPALERSLKKLRLDYVDLFIIHVPITMKPG 593
R KIADG+VKRE++FYT+KLW+ RPELVRPALERSLK L+LDYVDL++IH P+++KPG
Sbjct: 66 RSKIADGSVKREDIFYTSKLWSNSHRPELVRPALERSLKNLQLDYVDLYLIHFPVSVKPG 125
Query: 594 EELLPKDASGKVIFDTVDLRDTWAALEKCKDAGLTKSIGVSNFNHKQLEMILNKPGLKYK 773
EE++PKD +GK++FDTVDL TW A+EKCKDAGL KSIGVSNFNH+ LEMILNKPGLKYK
Sbjct: 126 EEVIPKDENGKILFDTVDLCATWEAMEKCKDAGLAKSIGVSNFNHRLLEMILNKPGLKYK 185
Query: 774 PVCNQ 788
PVCNQ
Sbjct: 186 PVCNQ 190
Score = 87.4 bits (215), Expect(2) = 1e-97
Identities = 43/66 (65%), Positives = 54/66 (81%)
Frame = +1
Query: 790 VEESNPYLLEDPVLNAIAKKHNRSPAQVALRYQLQRGVVVLAKSFNEQRIKENFQVQDKQ 969
V+ ++P LLEDPVL A+AKKH R+PA +ALRYQLQRGVVVLAKS+NEQRI++N QV + Q
Sbjct: 228 VDPNSPVLLEDPVLCALAKKHKRTPALIALRYQLQRGVVVLAKSYNEQRIRQNVQVFEFQ 287
Query: 970 CLCREL 987
E+
Sbjct: 288 LTSEEM 293
>ref|NP_003730.4| aldo-keto reductase family 1 member C3 [Homo sapiens].
Length = 323
Score = 287 bits (734), Expect(2) = 6e-97
Identities = 135/185 (72%), Positives = 159/185 (85%)
Frame = +3
Query: 234 RCVKLNDGHLMPVLGLGTLVSEGVPKSKAGEATRVAIEVGYRHIDAAYVYENEEEVGSAL 413
+CVKLNDGH MPVLG GT VP+SKA E T++AIE G+RHID+A++Y NEE+VG A+
Sbjct: 6 QCVKLNDGHFMPVLGFGTYAPPEVPRSKALEVTKLAIEAGFRHIDSAHLYNNEEQVGLAI 65
Query: 414 REKIADGTVKREELFYTTKLWATFFRPELVRPALERSLKKLRLDYVDLFIIHVPITMKPG 593
R KIADG+VKRE++FYT+KLW+TF RPELVRPALE SLKK +LDYVDL++IH P+++KPG
Sbjct: 66 RSKIADGSVKREDIFYTSKLWSTFHRPELVRPALENSLKKAQLDYVDLYLIHSPMSLKPG 125
Query: 594 EELLPKDASGKVIFDTVDLRDTWAALEKCKDAGLTKSIGVSNFNHKQLEMILNKPGLKYK 773
EEL P D +GKVIFD VDL TW A+EKCKDAGL KSIGVSNFN +QLEMILNKPGLKYK
Sbjct: 126 EELSPTDENGKVIFDIVDLCTTWEAMEKCKDAGLAKSIGVSNFNRRQLEMILNKPGLKYK 185
Query: 774 PVCNQ 788
PVCNQ
Sbjct: 186 PVCNQ 190
Score = 86.7 bits (213), Expect(2) = 6e-97
Identities = 42/66 (63%), Positives = 54/66 (81%)
Frame = +1
Query: 790 VEESNPYLLEDPVLNAIAKKHNRSPAQVALRYQLQRGVVVLAKSFNEQRIKENFQVQDKQ 969
V+ ++P LLEDPVL A+AKKH R+PA +ALRYQLQRGVVVLAKS+NEQRI++N QV + Q
Sbjct: 228 VDPNSPVLLEDPVLCALAKKHKRTPALIALRYQLQRGVVVLAKSYNEQRIRQNVQVFEFQ 287
Query: 970 CLCREL 987
++
Sbjct: 288 LTAEDM 293
>ref|NP_001809.3| aldo-keto reductase family 1 member C4 [Homo sapiens].
Length = 323
Score = 279 bits (714), Expect(2) = 5e-95
Identities = 129/183 (70%), Positives = 157/183 (85%)
Frame = +3
Query: 240 VKLNDGHLMPVLGLGTLVSEGVPKSKAGEATRVAIEVGYRHIDAAYVYENEEEVGSALRE 419
V+LNDGH MPVLG GT VP+++A E T++AIE G+RHID+AY+Y NEE+VG A+R
Sbjct: 8 VELNDGHFMPVLGFGTYAPPEVPRNRAVEVTKLAIEAGFRHIDSAYLYNNEEQVGLAIRS 67
Query: 420 KIADGTVKREELFYTTKLWATFFRPELVRPALERSLKKLRLDYVDLFIIHVPITMKPGEE 599
KIADG+VKRE++FYT+KLW TFF+P++V+PALE SLKKL+LDYVDL+++H P+ +KPGE
Sbjct: 68 KIADGSVKREDIFYTSKLWCTFFQPQMVQPALESSLKKLQLDYVDLYLLHFPMALKPGET 127
Query: 600 LLPKDASGKVIFDTVDLRDTWAALEKCKDAGLTKSIGVSNFNHKQLEMILNKPGLKYKPV 779
LPKD +GKVIFDTVDL TW +EKCKDAGL KSIGVSNFN +QLEMILNKPGLKYKPV
Sbjct: 128 PLPKDENGKVIFDTVDLSATWEVMEKCKDAGLAKSIGVSNFNCRQLEMILNKPGLKYKPV 187
Query: 780 CNQ 788
CNQ
Sbjct: 188 CNQ 190
Score = 87.8 bits (216), Expect(2) = 5e-95
Identities = 43/66 (65%), Positives = 54/66 (81%)
Frame = +1
Query: 790 VEESNPYLLEDPVLNAIAKKHNRSPAQVALRYQLQRGVVVLAKSFNEQRIKENFQVQDKQ 969
V+ ++P LLEDPVL A+AKKH R+PA +ALRYQLQRGVVVLAKS+NEQRI+EN QV + Q
Sbjct: 228 VDPNSPVLLEDPVLCALAKKHKRTPALIALRYQLQRGVVVLAKSYNEQRIRENIQVFEFQ 287
Query: 970 CLCREL 987
++
Sbjct: 288 LTSEDM 293
>ref|NP_005980.1| 3-oxo-5-beta-steroid 4-dehydrogenase isoform 1 [Homo sapiens].
Length = 326
Score = 231 bits (589), Expect(2) = 1e-75
Identities = 109/189 (57%), Positives = 144/189 (76%), Gaps = 1/189 (0%)
Frame = +3
Query: 225 ALSRCVKLNDGHLMPVLGLGTLVS-EGVPKSKAGEATRVAIEVGYRHIDAAYVYENEEEV 401
A S + L+DG+ +P++GLGT + PK + +VAI+ GYRHID AY+Y+NE EV
Sbjct: 5 AASHRIPLSDGNSIPIIGLGTYSEPKSTPKGACATSVKVAIDTGYRHIDGAYIYQNEHEV 64
Query: 402 GSALREKIADGTVKREELFYTTKLWATFFRPELVRPALERSLKKLRLDYVDLFIIHVPIT 581
G A+REKIA+G V+RE++FY KLWAT PE+VRP LER+L+ L+LDYVDL+II VP+
Sbjct: 65 GEAIREKIAEGKVRREDIFYCGKLWATNHVPEMVRPTLERTLRVLQLDYVDLYIIEVPMA 124
Query: 582 MKPGEELLPKDASGKVIFDTVDLRDTWAALEKCKDAGLTKSIGVSNFNHKQLEMILNKPG 761
KPG+E+ P+D +GK ++ +L TW A+E CKDAGL KS+GVSNFN +QLE+ILNKPG
Sbjct: 125 FKPGDEIYPRDENGKWLYHKSNLCATWEAMEACKDAGLVKSLGVSNFNRRQLELILNKPG 184
Query: 762 LKYKPVCNQ 788
LK+KPV NQ
Sbjct: 185 LKHKPVSNQ 193
Score = 71.2 bits (173), Expect(2) = 1e-75
Identities = 32/58 (55%), Positives = 47/58 (81%)
Frame = +1
Query: 790 VEESNPYLLEDPVLNAIAKKHNRSPAQVALRYQLQRGVVVLAKSFNEQRIKENFQVQD 963
V S+P LL+D +LN++ K++N++ AQ+ LR+ +QRGVVV+ KSFN +RIKENFQ+ D
Sbjct: 231 VNVSSPPLLKDALLNSLGKRYNKTAAQIVLRFNIQRGVVVIPKSFNLERIKENFQIFD 288
>ref|NP_001177836.1| 3-oxo-5-beta-steroid 4-dehydrogenase isoform 3 [Homo sapiens].
Length = 290
Score = 231 bits (589), Expect(2) = 2e-75
Identities = 109/189 (57%), Positives = 144/189 (76%), Gaps = 1/189 (0%)
Frame = +3
Query: 225 ALSRCVKLNDGHLMPVLGLGTLVS-EGVPKSKAGEATRVAIEVGYRHIDAAYVYENEEEV 401
A S + L+DG+ +P++GLGT + PK + +VAI+ GYRHID AY+Y+NE EV
Sbjct: 5 AASHRIPLSDGNSIPIIGLGTYSEPKSTPKGACATSVKVAIDTGYRHIDGAYIYQNEHEV 64
Query: 402 GSALREKIADGTVKREELFYTTKLWATFFRPELVRPALERSLKKLRLDYVDLFIIHVPIT 581
G A+REKIA+G V+RE++FY KLWAT PE+VRP LER+L+ L+LDYVDL+II VP+
Sbjct: 65 GEAIREKIAEGKVRREDIFYCGKLWATNHVPEMVRPTLERTLRVLQLDYVDLYIIEVPMA 124
Query: 582 MKPGEELLPKDASGKVIFDTVDLRDTWAALEKCKDAGLTKSIGVSNFNHKQLEMILNKPG 761
KPG+E+ P+D +GK ++ +L TW A+E CKDAGL KS+GVSNFN +QLE+ILNKPG
Sbjct: 125 FKPGDEIYPRDENGKWLYHKSNLCATWEAMEACKDAGLVKSLGVSNFNRRQLELILNKPG 184
Query: 762 LKYKPVCNQ 788
LK+KPV NQ
Sbjct: 185 LKHKPVSNQ 193
Score = 70.5 bits (171), Expect(2) = 2e-75
Identities = 32/56 (57%), Positives = 46/56 (82%)
Frame = +1
Query: 790 VEESNPYLLEDPVLNAIAKKHNRSPAQVALRYQLQRGVVVLAKSFNEQRIKENFQV 957
V S+P LL+D +LN++ K++N++ AQ+ LR+ +QRGVVV+ KSFN +RIKENFQV
Sbjct: 231 VNVSSPPLLKDALLNSLGKRYNKTAAQIVLRFNIQRGVVVIPKSFNLERIKENFQV 286
>ref|NP_001619.1| aldose reductase [Homo sapiens].
Length = 316
Score = 208 bits (529), Expect(2) = 8e-66
Identities = 101/181 (55%), Positives = 131/181 (72%)
Frame = +3
Query: 246 LNDGHLMPVLGLGTLVSEGVPKSKAGEATRVAIEVGYRHIDAAYVYENEEEVGSALREKI 425
LN+G MP+LGLGT S P + EA +VAI+VGYRHID A+VY+NE EVG A++EK+
Sbjct: 7 LNNGAKMPILGLGTWKS---PPGQVTEAVKVAIDVGYRHIDCAHVYQNENEVGVAIQEKL 63
Query: 426 ADGTVKREELFYTTKLWATFFRPELVRPALERSLKKLRLDYVDLFIIHVPITMKPGEELL 605
+ VKREELF +KLW T+ LV+ A +++L L+LDY+DL++IH P KPG+E
Sbjct: 64 REQVVKREELFIVSKLWCTYHEKGLVKGACQKTLSDLKLDYLDLYLIHWPTGFKPGKEFF 123
Query: 606 PKDASGKVIFDTVDLRDTWAALEKCKDAGLTKSIGVSNFNHKQLEMILNKPGLKYKPVCN 785
P D SG V+ ++ DTWAA+E+ D GL K+IG+SNFNH Q+EMILNKPGLKYKP N
Sbjct: 124 PLDESGNVVPSDTNILDTWAAMEELVDEGLVKAIGISNFNHLQVEMILNKPGLKYKPAVN 183
Query: 786 Q 788
Q
Sbjct: 184 Q 184
Score = 61.6 bits (148), Expect(2) = 8e-66
Identities = 29/54 (53%), Positives = 40/54 (74%)
Frame = +1
Query: 802 NPYLLEDPVLNAIAKKHNRSPAQVALRYQLQRGVVVLAKSFNEQRIKENFQVQD 963
+P LLEDP + AIA KHN++ AQV +R+ +QR +VV+ KS +RI ENF+V D
Sbjct: 225 DPSLLEDPRIKAIAAKHNKTTAQVLIRFPMQRNLVVIPKSVTPERIAENFKVFD 278
>ref|NP_064695.3| aldo-keto reductase family 1 member B10 [Homo sapiens].
Length = 316
Score = 197 bits (501), Expect(2) = 4e-61
Identities = 98/183 (53%), Positives = 126/183 (68%)
Frame = +3
Query: 240 VKLNDGHLMPVLGLGTLVSEGVPKSKAGEATRVAIEVGYRHIDAAYVYENEEEVGSALRE 419
V+L+ MP++GLGT S P K EA +VAI+ GYRHID AYVY+NE EVG A++E
Sbjct: 5 VELSTKAKMPIVGLGTWKS---PLGKVKEAVKVAIDAGYRHIDCAYVYQNEHEVGEAIQE 61
Query: 420 KIADGTVKREELFYTTKLWATFFRPELVRPALERSLKKLRLDYVDLFIIHVPITMKPGEE 599
KI + VKRE+LF +KLW TFF LVR A E++LK L+L Y+D+++IH P K G++
Sbjct: 62 KIQEKAVKREDLFIVSKLWPTFFERPLVRKAFEKTLKDLKLSYLDVYLIHWPQGFKSGDD 121
Query: 600 LLPKDASGKVIFDTVDLRDTWAALEKCKDAGLTKSIGVSNFNHKQLEMILNKPGLKYKPV 779
L PKD G I D W A+E+ D GL K++GVSNF+H Q+E +LNKPGLKYKPV
Sbjct: 122 LFPKDDKGNAIGGKATFLDAWEAMEELVDEGLVKALGVSNFSHFQIEKLLNKPGLKYKPV 181
Query: 780 CNQ 788
NQ
Sbjct: 182 TNQ 184
Score = 56.6 bits (135), Expect(2) = 4e-61
Identities = 27/54 (50%), Positives = 36/54 (66%)
Frame = +1
Query: 802 NPYLLEDPVLNAIAKKHNRSPAQVALRYQLQRGVVVLAKSFNEQRIKENFQVQD 963
+P LLEDP + IA KH ++ AQV +R+ +QR V+V+ KS RI EN QV D
Sbjct: 225 DPSLLEDPKIKEIAAKHKKTAAQVLIRFHIQRNVIVIPKSVTPARIVENIQVFD 278
>ref|NP_001074007.2| aldo-keto reductase family 1 member B15 [Homo sapiens].
Length = 344
Score = 177 bits (448), Expect(2) = 4e-54
Identities = 84/158 (53%), Positives = 109/158 (68%)
Frame = +3
Query: 315 KAGEATRVAIEVGYRHIDAAYVYENEEEVGSALREKIADGTVKREELFYTTKLWATFFRP 494
K EA +VAI+ YRHID AY YEN+ EVG A++EKI + V RE+LF +K+W TFF
Sbjct: 55 KVKEAVKVAIDAEYRHIDCAYFYENQHEVGEAIQEKIQEKAVMREDLFIVSKVWPTFFER 114
Query: 495 ELVRPALERSLKKLRLDYVDLFIIHVPITMKPGEELLPKDASGKVIFDTVDLRDTWAALE 674
LVR A E++LK L+L Y+D+++IH P K G++ PKD G +I D W A+E
Sbjct: 115 PLVRKAFEKTLKDLKLSYLDVYLIHWPQGFKTGDDFFPKDDKGNMISGKGTFLDAWEAME 174
Query: 675 KCKDAGLTKSIGVSNFNHKQLEMILNKPGLKYKPVCNQ 788
+ D GL K++GVSNFNH Q+E +LNKPGLKYKPV NQ
Sbjct: 175 ELVDEGLVKALGVSNFNHFQIERLLNKPGLKYKPVTNQ 212
Score = 53.9 bits (128), Expect(2) = 4e-54
Identities = 26/54 (48%), Positives = 34/54 (62%)
Frame = +1
Query: 802 NPYLLEDPVLNAIAKKHNRSPAQVALRYQLQRGVVVLAKSFNEQRIKENFQVQD 963
+P LLEDP + IA KH ++ AQV +R+ +QR V V+ KS I EN QV D
Sbjct: 253 DPSLLEDPKIKEIAAKHKKTTAQVLIRFHIQRNVTVIPKSMTPAHIVENIQVFD 306
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 39,579,281
Number of extensions: 1047708
Number of successful extensions: 3018
Number of sequences better than 1.0e-05: 19
Number of HSP's gapped: 3005
Number of HSP's successfully gapped: 35
Length of query: 331
Length of database: 18,297,164
Length adjustment: 103
Effective length of query: 228
Effective length of database: 14,901,872
Effective search space: 3397626816
Effective search space used: 3397626816
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002113
(993 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_085114.1| estradiol 17 beta-dehydrogenase 5 [Mus musculus]. 274 7e-93
Alignment gi|NP_084177.2| aldo-keto reductase family 1 member C21 [Mus mu... 259 6e-86
Alignment gi|NP_663339.1| 3-oxo-5-beta-steroid 4-dehydrogenase [Mus muscu... 229 4e-74
Alignment gi|NP_598827.1| aldo-keto reductase family 1 member C18 [Mus mu... 275 4e-74
Alignment gi|NP_473421.1| aldo-keto reductase family 1, member C20 [Mus m... 213 2e-73
Alignment gi|NP_081858.2| aldo-keto reductase family 1, member C-like [Mu... 268 6e-72
Alignment gi|NP_038806.2| aldo-keto reductase family 1 member C13 [Mus mu... 263 1e-70
Alignment gi|NP_038805.2| aldo-keto reductase family 1, member C12 [Mus m... 263 2e-70
Alignment gi|NP_598833.1| 3-alpha-hydroxysteroid dehydrogenase [Mus muscu... 261 5e-70
Alignment gi|NP_001013807.2| aldo-keto reductase family 1, member C19 [Mu... 258 4e-69
>ref|NP_085114.1| estradiol 17 beta-dehydrogenase 5 [Mus musculus].
Length = 323
Score = 274 bits (701), Expect(2) = 7e-93
Identities = 126/183 (68%), Positives = 156/183 (85%)
Frame = +3
Query: 240 VKLNDGHLMPVLGLGTLVSEGVPKSKAGEATRVAIEVGYRHIDAAYVYENEEEVGSALRE 419
V+L+DGH +P+LG GT + VPKSKA EAT++AI+ G+RHID+A +Y+NE+EVG A+R
Sbjct: 8 VRLSDGHFIPILGFGTYAPQEVPKSKATEATKIAIDAGFRHIDSASMYQNEKEVGLAIRS 67
Query: 420 KIADGTVKREELFYTTKLWATFFRPELVRPALERSLKKLRLDYVDLFIIHVPITMKPGEE 599
KIADGTVKRE++FYT+K+W TF RPELVR LE+SLK+L+LDYVDL++IH P+ MKPGE
Sbjct: 68 KIADGTVKREDIFYTSKVWCTFHRPELVRVCLEQSLKQLQLDYVDLYLIHFPMAMKPGEN 127
Query: 600 LLPKDASGKVIFDTVDLRDTWAALEKCKDAGLTKSIGVSNFNHKQLEMILNKPGLKYKPV 779
LPKD +GK+I+D VD+ DTW A+EKCKDAGL KSIGVSNFN +QLE IL KPGLKYKPV
Sbjct: 128 YLPKDENGKLIYDAVDICDTWEAMEKCKDAGLAKSIGVSNFNRRQLEKILKKPGLKYKPV 187
Query: 780 CNQ 788
CNQ
Sbjct: 188 CNQ 190
Score = 85.5 bits (210), Expect(2) = 7e-93
Identities = 41/66 (62%), Positives = 56/66 (84%)
Frame = +1
Query: 790 VEESNPYLLEDPVLNAIAKKHNRSPAQVALRYQLQRGVVVLAKSFNEQRIKENFQVQDKQ 969
V++S+P LL++PVL ++AKK+NR+PA +ALRYQLQRGVVVLAKSF+E+RIKEN QV + Q
Sbjct: 228 VDQSSPVLLDNPVLGSMAKKYNRTPALIALRYQLQRGVVVLAKSFSEKRIKENMQVFEFQ 287
Query: 970 CLCREL 987
++
Sbjct: 288 LTSEDM 293
>ref|NP_084177.2| aldo-keto reductase family 1 member C21 [Mus musculus].
Length = 323
Score = 259 bits (663), Expect(2) = 6e-86
Identities = 122/184 (66%), Positives = 148/184 (80%)
Frame = +3
Query: 237 CVKLNDGHLMPVLGLGTLVSEGVPKSKAGEATRVAIEVGYRHIDAAYVYENEEEVGSALR 416
CV LNDG+ +PVLG GT + PKSKA E T++AI+ G+ H D+A VY E+ VG A+R
Sbjct: 7 CVILNDGNFIPVLGFGTALPLECPKSKAKELTKIAIDAGFHHFDSASVYNTEDHVGEAIR 66
Query: 417 EKIADGTVKREELFYTTKLWATFFRPELVRPALERSLKKLRLDYVDLFIIHVPITMKPGE 596
KIADGTV+RE++FYT+K+W T PELVR +LERSL+KL+ DYVDL++IH P+ +KPGE
Sbjct: 67 SKIADGTVRREDIFYTSKVWCTSLHPELVRASLERSLQKLQFDYVDLYLIHYPMALKPGE 126
Query: 597 ELLPKDASGKVIFDTVDLRDTWAALEKCKDAGLTKSIGVSNFNHKQLEMILNKPGLKYKP 776
E P D GK+IFD VDL TW A+EKCKDAGLTKSIGVSNFN++QLEMILNKPGLKYKP
Sbjct: 127 ENFPVDEHGKLIFDRVDLCATWEAMEKCKDAGLTKSIGVSNFNYRQLEMILNKPGLKYKP 186
Query: 777 VCNQ 788
VCNQ
Sbjct: 187 VCNQ 190
Score = 77.0 bits (188), Expect(2) = 6e-86
Identities = 36/60 (60%), Positives = 50/60 (83%)
Frame = +1
Query: 790 VEESNPYLLEDPVLNAIAKKHNRSPAQVALRYQLQRGVVVLAKSFNEQRIKENFQVQDKQ 969
V++++P LL++PVL ++AKK+NR+PA +ALRYQLQRG+VVL S E+RIKEN QV + Q
Sbjct: 228 VDQNSPVLLDEPVLGSMAKKYNRTPALIALRYQLQRGIVVLNTSLKEERIKENMQVFEFQ 287
>ref|NP_663339.1| 3-oxo-5-beta-steroid 4-dehydrogenase [Mus musculus].
Length = 325
Score = 229 bits (585), Expect(2) = 4e-74
Identities = 109/183 (59%), Positives = 138/183 (75%)
Frame = +3
Query: 240 VKLNDGHLMPVLGLGTLVSEGVPKSKAGEATRVAIEVGYRHIDAAYVYENEEEVGSALRE 419
+ L+DG+ +P++GLGT K A + AI+ GYRHID AYVY NE EVG A+RE
Sbjct: 10 ISLSDGNNIPLIGLGTYSDPRPVPGKTYVAVKTAIDEGYRHIDGAYVYHNEHEVGEAIRE 69
Query: 420 KIADGTVKREELFYTTKLWATFFRPELVRPALERSLKKLRLDYVDLFIIHVPITMKPGEE 599
KIA+G VKREE+FY KLW T P +V PALER+LK L+LDY+DL+II +P+ KPG+E
Sbjct: 70 KIAEGKVKREEIFYCGKLWNTEHVPSMVLPALERTLKALKLDYIDLYIIELPMAFKPGKE 129
Query: 600 LLPKDASGKVIFDTVDLRDTWAALEKCKDAGLTKSIGVSNFNHKQLEMILNKPGLKYKPV 779
+ P+D +G++I+D +L TW ALE CKDAGL KS+GVSNFN +QLE+ILNKPGLKYKPV
Sbjct: 130 IYPRDENGRIIYDKTNLCATWEALEACKDAGLVKSLGVSNFNRRQLELILNKPGLKYKPV 189
Query: 780 CNQ 788
NQ
Sbjct: 190 TNQ 192
Score = 67.8 bits (164), Expect(2) = 4e-74
Identities = 30/58 (51%), Positives = 44/58 (75%)
Frame = +1
Query: 790 VEESNPYLLEDPVLNAIAKKHNRSPAQVALRYQLQRGVVVLAKSFNEQRIKENFQVQD 963
V S+P LL D +L ++ KK+N++ AQ+ LR+ +QRG+VV+ KSF +RIKENFQ+ D
Sbjct: 230 VNVSSPPLLNDELLTSLGKKYNKTQAQIVLRFNIQRGIVVIPKSFTPERIKENFQIFD 287
>ref|NP_598827.1| aldo-keto reductase family 1 member C18 [Mus musculus].
Length = 323
Score = 275 bits (703), Expect = 4e-74
Identities = 131/202 (64%), Positives = 163/202 (80%)
Frame = +3
Query: 240 VKLNDGHLMPVLGLGTLVSEGVPKSKAGEATRVAIEVGYRHIDAAYVYENEEEVGSALRE 419
++LNDGH +PVLG GT +E K K+ E+T++AI+VG+ HID +++Y+NEEE+G A+
Sbjct: 8 IELNDGHSIPVLGFGTYATEEHLKKKSMESTKIAIDVGFCHIDCSHLYQNEEEIGQAILS 67
Query: 420 KIADGTVKREELFYTTKLWATFFRPELVRPALERSLKKLRLDYVDLFIIHVPITMKPGEE 599
KI DGTVKRE++FYT+KLW+T RPELVRP+LE SL+KL LDYVDL++IH P+++KPG E
Sbjct: 68 KIEDGTVKREDIFYTSKLWSTSHRPELVRPSLENSLRKLNLDYVDLYLIHFPVSLKPGNE 127
Query: 600 LLPKDASGKVIFDTVDLRDTWAALEKCKDAGLTKSIGVSNFNHKQLEMILNKPGLKYKPV 779
LLPKD G +IFDTVDL DTW A+EKCKDAGL KSIGVSNFN +QLEMILNKPGLKYKPV
Sbjct: 128 LLPKDEHGNLIFDTVDLCDTWEAMEKCKDAGLAKSIGVSNFNRRQLEMILNKPGLKYKPV 187
Query: 780 CNQGGREQPISLRGSSLKCYCQ 845
CNQ E + L S L YC+
Sbjct: 188 CNQ--VECHLYLNQSKLLAYCK 207
Score = 81.6 bits (200), Expect = 8e-16
Identities = 39/60 (65%), Positives = 48/60 (80%)
Frame = +1
Query: 790 VEESNPYLLEDPVLNAIAKKHNRSPAQVALRYQLQRGVVVLAKSFNEQRIKENFQVQDKQ 969
+ E P LL+DPVL A+AKK+ R+PA +ALRYQL RG+V LAKSFNE+RI+EN QV D Q
Sbjct: 228 INEDTPVLLDDPVLCAMAKKYKRTPALIALRYQLDRGIVALAKSFNEERIRENMQVFDFQ 287
>ref|NP_473421.1| aldo-keto reductase family 1, member C20 [Mus musculus].
Length = 262
Score = 213 bits (542), Expect(2) = 2e-73
Identities = 105/183 (57%), Positives = 127/183 (69%)
Frame = +3
Query: 240 VKLNDGHLMPVLGLGTLVSEGVPKSKAGEATRVAIEVGYRHIDAAYVYENEEEVGSALRE 419
V LNDGH +P+LG GT + VP+SKA EAT++AI+ G+RHID A VY+NE+EVG A+R
Sbjct: 8 VLLNDGHFIPILGFGTSAPQEVPRSKATEATKIAIDAGFRHIDCAAVYQNEKEVGLAIRS 67
Query: 420 KIADGTVKREELFYTTKLWATFFRPELVRPALERSLKKLRLDYVDLFIIHVPITMKPGEE 599
KI DGTVKRE++F T+K+W TF RPELV +PGE
Sbjct: 68 KIVDGTVKREDIFCTSKVWQTFHRPELV---------------------------QPGEN 100
Query: 600 LLPKDASGKVIFDTVDLRDTWAALEKCKDAGLTKSIGVSNFNHKQLEMILNKPGLKYKPV 779
PKD +GK I+D VD+ DTW A+EKCKDAGL KSIGV NFN +QLE IL+KPGLKYKPV
Sbjct: 101 YFPKDENGKFIYDAVDICDTWEAMEKCKDAGLAKSIGVCNFNRRQLEKILSKPGLKYKPV 160
Query: 780 CNQ 788
CNQ
Sbjct: 161 CNQ 163
Score = 82.0 bits (201), Expect(2) = 2e-73
Identities = 40/56 (71%), Positives = 50/56 (89%)
Frame = +1
Query: 790 VEESNPYLLEDPVLNAIAKKHNRSPAQVALRYQLQRGVVVLAKSFNEQRIKENFQV 957
V++S P LL+DPVL ++AKK+NR+PA +ALRYQ+QRGVVVLAKSF E+RIKEN QV
Sbjct: 201 VDKSFPVLLDDPVLGSMAKKYNRTPALIALRYQVQRGVVVLAKSFIEKRIKENMQV 256
>ref|NP_081858.2| aldo-keto reductase family 1, member C-like [Mus musculus].
Length = 322
Score = 268 bits (684), Expect = 6e-72
Identities = 129/204 (63%), Positives = 164/204 (80%)
Frame = +3
Query: 234 RCVKLNDGHLMPVLGLGTLVSEGVPKSKAGEATRVAIEVGYRHIDAAYVYENEEEVGSAL 413
R ++L+DGH +PVLG GT V V KS +AT++AI+ G+RHID+AY Y+NEEEVG A+
Sbjct: 5 RYMELSDGHHIPVLGFGTFVPGEVSKSMVAKATKIAIDAGFRHIDSAYFYQNEEEVGLAI 64
Query: 414 REKIADGTVKREELFYTTKLWATFFRPELVRPALERSLKKLRLDYVDLFIIHVPITMKPG 593
R K+ADGTV+RE++FYT+KL T RPELV+P LE+SL+KL+LDYVDL++IH P++MKPG
Sbjct: 65 RSKVADGTVRREDIFYTSKLPCTCHRPELVQPCLEQSLRKLQLDYVDLYLIHCPVSMKPG 124
Query: 594 EELLPKDASGKVIFDTVDLRDTWAALEKCKDAGLTKSIGVSNFNHKQLEMILNKPGLKYK 773
+L+P D +GK++FDTVDL DTW A+EKCKD+GL KSIGVSNFN +QLEMILNKPGL+YK
Sbjct: 125 NDLIPTDENGKLLFDTVDLCDTWEAMEKCKDSGLAKSIGVSNFNRRQLEMILNKPGLRYK 184
Query: 774 PVCNQGGREQPISLRGSSLKCYCQ 845
PVCNQ E L S L YC+
Sbjct: 185 PVCNQ--VECHPYLNQSKLLDYCK 206
Score = 79.0 bits (193), Expect = 5e-15
Identities = 35/56 (62%), Positives = 48/56 (85%)
Frame = +1
Query: 790 VEESNPYLLEDPVLNAIAKKHNRSPAQVALRYQLQRGVVVLAKSFNEQRIKENFQV 957
+EE+ PYLLEDP L A+A+KH ++PA ++LRY LQRG+V++ KSFNE+RIKEN +V
Sbjct: 227 IEENAPYLLEDPTLCAMAEKHKQTPALISLRYLLQRGIVIVTKSFNEKRIKENLKV 282
>ref|NP_038806.2| aldo-keto reductase family 1 member C13 [Mus musculus].
Length = 323
Score = 263 bits (673), Expect = 1e-70
Identities = 129/203 (63%), Positives = 154/203 (75%)
Frame = +3
Query: 237 CVKLNDGHLMPVLGLGTLVSEGVPKSKAGEATRVAIEVGYRHIDAAYVYENEEEVGSALR 416
CVKLNDGHL+P LG GT + VPKSK+ EA +A++VGYRH+D AY Y+ EEE+G A++
Sbjct: 7 CVKLNDGHLIPALGFGTYKPKEVPKSKSLEAACLALDVGYRHVDTAYAYQVEEEIGQAIQ 66
Query: 417 EKIADGTVKREELFYTTKLWATFFRPELVRPALERSLKKLRLDYVDLFIIHVPITMKPGE 596
KI G VKRE+LF TTKLW T FRPELV+PALE+SLKKL+LDYVDL+I+H P+ MK G+
Sbjct: 67 SKIKAGVVKREDLFITTKLWCTCFRPELVKPALEKSLKKLQLDYVDLYIMHYPVPMKSGD 126
Query: 597 ELLPKDASGKVIFDTVDLRDTWAALEKCKDAGLTKSIGVSNFNHKQLEMILNKPGLKYKP 776
P + GK + DTVD DTW LE+CKDAGL KSIGVSNFNH+QLE ILNKPGLKYKP
Sbjct: 127 NDFPVNEQGKSLLDTVDFCDTWERLEECKDAGLVKSIGVSNFNHRQLERILNKPGLKYKP 186
Query: 777 VCNQGGREQPISLRGSSLKCYCQ 845
VCNQ E + L L YC+
Sbjct: 187 VCNQ--VECHLYLNQRKLLDYCE 207
Score = 68.9 bits (167), Expect = 6e-12
Identities = 32/56 (57%), Positives = 44/56 (78%)
Frame = +1
Query: 790 VEESNPYLLEDPVLNAIAKKHNRSPAQVALRYQLQRGVVVLAKSFNEQRIKENFQV 957
V++++P LL DPVL +AKK+ RSPA +ALRY +QRG+V LA+SF E ++EN QV
Sbjct: 228 VDQNSPVLLNDPVLCDVAKKNKRSPALIALRYLIQRGIVPLAQSFKENEMRENLQV 283
>ref|NP_038805.2| aldo-keto reductase family 1, member C12 [Mus musculus].
Length = 323
Score = 263 bits (671), Expect = 2e-70
Identities = 129/202 (63%), Positives = 154/202 (76%)
Frame = +3
Query: 240 VKLNDGHLMPVLGLGTLVSEGVPKSKAGEATRVAIEVGYRHIDAAYVYENEEEVGSALRE 419
VKLNDGHL+P LG GT + VPKSK+ EA +A++VGYRH+D AY Y+ EEE+G A++
Sbjct: 8 VKLNDGHLIPALGFGTYKPKEVPKSKSLEAACLALDVGYRHVDTAYAYQVEEEIGQAIQS 67
Query: 420 KIADGTVKREELFYTTKLWATFFRPELVRPALERSLKKLRLDYVDLFIIHVPITMKPGEE 599
KI G VKRE+LF TTKLW FRPELV+PALE+SLK L+LDYVDL++IH P+ MKPG+
Sbjct: 68 KIKAGVVKREDLFITTKLWCGCFRPELVKPALEKSLKSLQLDYVDLYLIHYPVPMKPGDN 127
Query: 600 LLPKDASGKVIFDTVDLRDTWAALEKCKDAGLTKSIGVSNFNHKQLEMILNKPGLKYKPV 779
P D +GK + DTVD DTW LE+CKDAGL KSIGVSNFNH+QLE ILNKPGLKYKPV
Sbjct: 128 ESPLDENGKFLLDTVDFCDTWERLEECKDAGLVKSIGVSNFNHRQLERILNKPGLKYKPV 187
Query: 780 CNQGGREQPISLRGSSLKCYCQ 845
CNQ E + L S L YC+
Sbjct: 188 CNQ--VECHLYLNQSKLLDYCK 207
Score = 67.4 bits (163), Expect = 2e-11
Identities = 32/60 (53%), Positives = 45/60 (75%)
Frame = +1
Query: 790 VEESNPYLLEDPVLNAIAKKHNRSPAQVALRYQLQRGVVVLAKSFNEQRIKENFQVQDKQ 969
V++++P LL DPVL +AK++ RSPA +ALRY QRG+V LA+SF E ++EN QV + Q
Sbjct: 228 VDQNSPVLLNDPVLCDVAKRNKRSPALIALRYLFQRGIVPLAQSFKENEMRENLQVFEFQ 287
>ref|NP_598833.1| 3-alpha-hydroxysteroid dehydrogenase [Mus musculus].
Length = 323
Score = 261 bits (668), Expect = 5e-70
Identities = 125/207 (60%), Positives = 161/207 (77%)
Frame = +3
Query: 225 ALSRCVKLNDGHLMPVLGLGTLVSEGVPKSKAGEATRVAIEVGYRHIDAAYVYENEEEVG 404
++S V LNDGH +P LG GT V + VPK + +AT++AI+ G+RH D+AY+Y+ EEEVG
Sbjct: 3 SVSPRVVLNDGHFIPALGFGTTVPDKVPKDELIKATKIAIDTGFRHFDSAYLYQIEEEVG 62
Query: 405 SALREKIADGTVKREELFYTTKLWATFFRPELVRPALERSLKKLRLDYVDLFIIHVPITM 584
A+R KI DGTVKRE++FYT+KLW+TF RPELVR LE++LK +LDYVDL+IIH P+ +
Sbjct: 63 QAIRSKIEDGTVKREDIFYTSKLWSTFHRPELVRSCLEKTLKNAQLDYVDLYIIHFPMAL 122
Query: 585 KPGEELLPKDASGKVIFDTVDLRDTWAALEKCKDAGLTKSIGVSNFNHKQLEMILNKPGL 764
+PG++L P+D GK++ + VDL DTW A+EKCKDAGL KSIGVSNFN +QLE ILNKPGL
Sbjct: 123 QPGDKLFPRDEHGKLLAEAVDLCDTWEAMEKCKDAGLAKSIGVSNFNFRQLETILNKPGL 182
Query: 765 KYKPVCNQGGREQPISLRGSSLKCYCQ 845
KYKPVCNQ E + L S + YC+
Sbjct: 183 KYKPVCNQ--VECHLYLNQSQMLDYCK 207
Score = 70.9 bits (172), Expect = 1e-12
Identities = 33/66 (50%), Positives = 50/66 (75%)
Frame = +1
Query: 790 VEESNPYLLEDPVLNAIAKKHNRSPAQVALRYQLQRGVVVLAKSFNEQRIKENFQVQDKQ 969
V++ +P LL+DPVL A+A K+ ++PA +A+RYQLQRG+VVL +SF E+RIKE +V + Q
Sbjct: 228 VDQKSPVLLDDPVLCAMANKYKQTPALIAIRYQLQRGIVVLTRSFKEKRIKEFMKVFEFQ 287
Query: 970 CLCREL 987
++
Sbjct: 288 LASEDM 293
>ref|NP_001013807.2| aldo-keto reductase family 1, member C19 [Mus musculus].
Length = 323
Score = 258 bits (660), Expect = 4e-69
Identities = 127/204 (62%), Positives = 152/204 (74%)
Frame = +3
Query: 234 RCVKLNDGHLMPVLGLGTLVSEGVPKSKAGEATRVAIEVGYRHIDAAYVYENEEEVGSAL 413
+CVKLNDG+ +P LG GT E V ++K EA +A+E G+RHID AYVY+ E VG A+
Sbjct: 6 QCVKLNDGNFIPALGFGTYKPEEVNENKPLEAIHLALEAGFRHIDTAYVYQTENHVGQAI 65
Query: 414 REKIADGTVKREELFYTTKLWATFFRPELVRPALERSLKKLRLDYVDLFIIHVPITMKPG 593
R KIA G VKRE++F TTKLW TF RPELVR LE+SLK L+LDY DL++IH P+ MKPG
Sbjct: 66 RSKIAAGLVKREDIFLTTKLWCTFHRPELVRSNLEKSLKNLQLDYADLYLIHYPVQMKPG 125
Query: 594 EELLPKDASGKVIFDTVDLRDTWAALEKCKDAGLTKSIGVSNFNHKQLEMILNKPGLKYK 773
E+L P+D GK +FDTVD+ TW A+EKCKDAGL KSIGVSNFN +QLE ILNKPGLKYK
Sbjct: 126 EDLFPEDEHGKTLFDTVDICATWEAMEKCKDAGLVKSIGVSNFNSRQLEKILNKPGLKYK 185
Query: 774 PVCNQGGREQPISLRGSSLKCYCQ 845
PVCNQ E + L L YC+
Sbjct: 186 PVCNQ--VECHLYLNQRKLLNYCK 207
Score = 78.2 bits (191), Expect = 9e-15
Identities = 37/56 (66%), Positives = 45/56 (80%)
Frame = +1
Query: 790 VEESNPYLLEDPVLNAIAKKHNRSPAQVALRYQLQRGVVVLAKSFNEQRIKENFQV 957
V+ S+P LL DP+L +AKKH RSPAQ+ALRY LQRG+VVLA+S+ E IKEN QV
Sbjct: 228 VDPSSPVLLNDPILCDMAKKHKRSPAQIALRYHLQRGIVVLAQSYKENEIKENIQV 283
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 33,532,856
Number of extensions: 878497
Number of successful extensions: 2408
Number of sequences better than 1.0e-05: 16
Number of HSP's gapped: 2401
Number of HSP's successfully gapped: 32
Length of query: 331
Length of database: 15,617,559
Length adjustment: 102
Effective length of query: 229
Effective length of database: 12,553,887
Effective search space: 2874840123
Effective search space used: 2874840123
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002113
(993 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001033715.2| aldo-keto reductase family 1, member C-like ... 380 e-133
Alignment gi|NP_001116547.1| aldo-keto reductase family 1 member C4 [Sus ... 379 e-133
Alignment gi|NP_001038034.1| putative aldo-keto reductase family 1 member... 298 7e-99
Alignment gi|XP_003130882.1| PREDICTED: LOW QUALITY PROTEIN: prostaglandi... 291 1e-96
Alignment gi|NP_001038035.1| putative aldo-keto reductase family 1 member... 290 2e-91
Alignment gi|NP_001038083.1| aldo-keto reductase family 1 member C1 [Sus ... 253 4e-88
Alignment gi|XP_003134685.2| PREDICTED: 3-oxo-5-beta-steroid 4-dehydrogen... 232 2e-61
Alignment gi|NP_001001539.1| aldose reductase [Sus scrofa]. 193 3e-61
Alignment gi|NP_001038033.1| 1,5-anhydro-D-fructose reductase [Sus scrofa]. 181 2e-59
Alignment gi|NP_999055.1| alcohol dehydrogenase [NADP+] [Sus scrofa]. 149 2e-36
>ref|NP_001033715.2| aldo-keto reductase family 1, member C-like 1 [Sus scrofa].
Length = 322
Score = 380 bits (976), Expect(2) = e-133
Identities = 189/189 (100%), Positives = 189/189 (100%)
Frame = +3
Query: 222 MALSRCVKLNDGHLMPVLGLGTLVSEGVPKSKAGEATRVAIEVGYRHIDAAYVYENEEEV 401
MALSRCVKLNDGHLMPVLGLGTLVSEGVPKSKAGEATRVAIEVGYRHIDAAYVYENEEEV
Sbjct: 1 MALSRCVKLNDGHLMPVLGLGTLVSEGVPKSKAGEATRVAIEVGYRHIDAAYVYENEEEV 60
Query: 402 GSALREKIADGTVKREELFYTTKLWATFFRPELVRPALERSLKKLRLDYVDLFIIHVPIT 581
GSALREKIADGTVKREELFYTTKLWATFFRPELVRPALERSLKKLRLDYVDLFIIHVPIT
Sbjct: 61 GSALREKIADGTVKREELFYTTKLWATFFRPELVRPALERSLKKLRLDYVDLFIIHVPIT 120
Query: 582 MKPGEELLPKDASGKVIFDTVDLRDTWAALEKCKDAGLTKSIGVSNFNHKQLEMILNKPG 761
MKPGEELLPKDASGKVIFDTVDLRDTWAALEKCKDAGLTKSIGVSNFNHKQLEMILNKPG
Sbjct: 121 MKPGEELLPKDASGKVIFDTVDLRDTWAALEKCKDAGLTKSIGVSNFNHKQLEMILNKPG 180
Query: 762 LKYKPVCNQ 788
LKYKPVCNQ
Sbjct: 181 LKYKPVCNQ 189
Score = 112 bits (280), Expect(2) = e-133
Identities = 56/58 (96%), Positives = 57/58 (98%)
Frame = +1
Query: 790 VEESNPYLLEDPVLNAIAKKHNRSPAQVALRYQLQRGVVVLAKSFNEQRIKENFQVQD 963
VEESNPYLLEDPVLNAIAKKHNRSPAQVALRYQLQRGVVVLAKSFNEQRIKENFQV +
Sbjct: 227 VEESNPYLLEDPVLNAIAKKHNRSPAQVALRYQLQRGVVVLAKSFNEQRIKENFQVFB 284
>ref|NP_001116547.1| aldo-keto reductase family 1 member C4 [Sus scrofa].
Length = 322
Score = 379 bits (973), Expect(2) = e-133
Identities = 188/189 (99%), Positives = 189/189 (100%)
Frame = +3
Query: 222 MALSRCVKLNDGHLMPVLGLGTLVSEGVPKSKAGEATRVAIEVGYRHIDAAYVYENEEEV 401
MAL+RCVKLNDGHLMPVLGLGTLVSEGVPKSKAGEATRVAIEVGYRHIDAAYVYENEEEV
Sbjct: 1 MALNRCVKLNDGHLMPVLGLGTLVSEGVPKSKAGEATRVAIEVGYRHIDAAYVYENEEEV 60
Query: 402 GSALREKIADGTVKREELFYTTKLWATFFRPELVRPALERSLKKLRLDYVDLFIIHVPIT 581
GSALREKIADGTVKREELFYTTKLWATFFRPELVRPALERSLKKLRLDYVDLFIIHVPIT
Sbjct: 61 GSALREKIADGTVKREELFYTTKLWATFFRPELVRPALERSLKKLRLDYVDLFIIHVPIT 120
Query: 582 MKPGEELLPKDASGKVIFDTVDLRDTWAALEKCKDAGLTKSIGVSNFNHKQLEMILNKPG 761
MKPGEELLPKDASGKVIFDTVDLRDTWAALEKCKDAGLTKSIGVSNFNHKQLEMILNKPG
Sbjct: 121 MKPGEELLPKDASGKVIFDTVDLRDTWAALEKCKDAGLTKSIGVSNFNHKQLEMILNKPG 180
Query: 762 LKYKPVCNQ 788
LKYKPVCNQ
Sbjct: 181 LKYKPVCNQ 189
Score = 113 bits (282), Expect(2) = e-133
Identities = 57/58 (98%), Positives = 57/58 (98%)
Frame = +1
Query: 790 VEESNPYLLEDPVLNAIAKKHNRSPAQVALRYQLQRGVVVLAKSFNEQRIKENFQVQD 963
VEESNPYLLEDPVLNAIAKKHNRSPAQVALRYQLQRGVVVLAKSFNEQRIKENFQV D
Sbjct: 227 VEESNPYLLEDPVLNAIAKKHNRSPAQVALRYQLQRGVVVLAKSFNEQRIKENFQVFD 284
>ref|NP_001038034.1| putative aldo-keto reductase family 1 member C1 [Sus scrofa].
Length = 337
Score = 298 bits (763), Expect(2) = 7e-99
Identities = 141/186 (75%), Positives = 164/186 (88%)
Frame = +3
Query: 231 SRCVKLNDGHLMPVLGLGTLVSEGVPKSKAGEATRVAIEVGYRHIDAAYVYENEEEVGSA 410
S+ ++LNDGH +PVLG GT E VPKS+A EAT+ AIEVG+RHID+AY+Y+NEE+VG A
Sbjct: 5 SQRLRLNDGHFIPVLGFGTYAPEEVPKSEALEATKYAIEVGFRHIDSAYLYQNEEQVGQA 64
Query: 411 LREKIADGTVKREELFYTTKLWATFFRPELVRPALERSLKKLRLDYVDLFIIHVPITMKP 590
+R KIADGTVKRE++FYT+KLWATF RPELVRPALE+SLK L+LDYVDL+IIH P+ +KP
Sbjct: 65 IRSKIADGTVKREDIFYTSKLWATFLRPELVRPALEKSLKNLQLDYVDLYIIHFPVALKP 124
Query: 591 GEELLPKDASGKVIFDTVDLRDTWAALEKCKDAGLTKSIGVSNFNHKQLEMILNKPGLKY 770
GEELLP D +GK +FDTVDL TW ALEKCKDAGLTKSIGVSNFNH+QLE ILNKPGLKY
Sbjct: 125 GEELLPTDENGKALFDTVDLCRTWEALEKCKDAGLTKSIGVSNFNHQQLERILNKPGLKY 184
Query: 771 KPVCNQ 788
KPVCNQ
Sbjct: 185 KPVCNQ 190
Score = 81.3 bits (199), Expect(2) = 7e-99
Identities = 40/56 (71%), Positives = 49/56 (87%)
Frame = +1
Query: 790 VEESNPYLLEDPVLNAIAKKHNRSPAQVALRYQLQRGVVVLAKSFNEQRIKENFQV 957
V ++P LLEDPVL+AIAKKH ++ A +ALRYQLQRGVVVLAKS+N++RIKEN QV
Sbjct: 228 VNLNHPVLLEDPVLHAIAKKHKQTSAVIALRYQLQRGVVVLAKSYNKRRIKENLQV 283
>ref|XP_003130882.1| PREDICTED: LOW QUALITY PROTEIN: prostaglandin F synthase 1-like
[Sus scrofa].
Length = 323
Score = 291 bits (744), Expect(2) = 1e-96
Identities = 136/186 (73%), Positives = 162/186 (87%)
Frame = +3
Query: 231 SRCVKLNDGHLMPVLGLGTLVSEGVPKSKAGEATRVAIEVGYRHIDAAYVYENEEEVGSA 410
S+C++LNDGHL+PVLG GT E VPKS+A EAT+ AIEVG+ HID A++Y+ EE+VG A
Sbjct: 5 SQCLELNDGHLIPVLGFGTYAPEEVPKSEALEATKYAIEVGFCHIDGAHLYQKEEQVGQA 64
Query: 411 LREKIADGTVKREELFYTTKLWATFFRPELVRPALERSLKKLRLDYVDLFIIHVPITMKP 590
+R KIADG VKRE++FYT+KLWATF RPELV+PALE+SLK L+LDYVDL+IIH P+ +KP
Sbjct: 65 IRSKIADGXVKREDIFYTSKLWATFLRPELVQPALEKSLKNLQLDYVDLYIIHFPVALKP 124
Query: 591 GEELLPKDASGKVIFDTVDLRDTWAALEKCKDAGLTKSIGVSNFNHKQLEMILNKPGLKY 770
G+ELLP+D +GK+I DTVD TW ALEKCKDAGLTKSIGVSNFNH+QLE ILNKPGLKY
Sbjct: 125 GDELLPRDENGKIIMDTVDFCHTWEALEKCKDAGLTKSIGVSNFNHQQLERILNKPGLKY 184
Query: 771 KPVCNQ 788
KPVCNQ
Sbjct: 185 KPVCNQ 190
Score = 80.9 bits (198), Expect(2) = 1e-96
Identities = 41/58 (70%), Positives = 49/58 (84%)
Frame = +1
Query: 790 VEESNPYLLEDPVLNAIAKKHNRSPAQVALRYQLQRGVVVLAKSFNEQRIKENFQVQD 963
V ++P LLEDPVL+AIAKKH ++ A +ALRYQLQRGVVVLAKS N++RIKEN QV D
Sbjct: 228 VNLNHPVLLEDPVLHAIAKKHKQTSAVIALRYQLQRGVVVLAKSXNKKRIKENLQVFD 285
>ref|NP_001038035.1| putative aldo-keto reductase family 1 member C2 [Sus scrofa].
Length = 271
Score = 290 bits (743), Expect(2) = 2e-91
Identities = 136/186 (73%), Positives = 161/186 (86%)
Frame = +3
Query: 231 SRCVKLNDGHLMPVLGLGTLVSEGVPKSKAGEATRVAIEVGYRHIDAAYVYENEEEVGSA 410
S+C++LNDGHL PVLG GT E VPKS+A EA + AIEVG+ HID A++Y+ EE+VG A
Sbjct: 5 SQCLELNDGHLXPVLGFGTYAPEEVPKSEALEAAKYAIEVGFCHIDGAHLYQKEEQVGQA 64
Query: 411 LREKIADGTVKREELFYTTKLWATFFRPELVRPALERSLKKLRLDYVDLFIIHVPITMKP 590
+R KIADGTVKRE++FYT+KLWATF RPELV+PALE+SLK L+LDYVDL+IIH P+ +KP
Sbjct: 65 IRSKIADGTVKREDIFYTSKLWATFLRPELVQPALEKSLKNLQLDYVDLYIIHFPVALKP 124
Query: 591 GEELLPKDASGKVIFDTVDLRDTWAALEKCKDAGLTKSIGVSNFNHKQLEMILNKPGLKY 770
G+ELLP+D +GK+I DTVD TW ALEKCKDAGLTKSIGVSNFNH+QLE ILNKPGLKY
Sbjct: 125 GDELLPRDENGKIIMDTVDFCHTWEALEKCKDAGLTKSIGVSNFNHQQLERILNKPGLKY 184
Query: 771 KPVCNQ 788
KPVCNQ
Sbjct: 185 KPVCNQ 190
Score = 63.9 bits (154), Expect(2) = 2e-91
Identities = 32/44 (72%), Positives = 38/44 (86%)
Frame = +1
Query: 790 VEESNPYLLEDPVLNAIAKKHNRSPAQVALRYQLQRGVVVLAKS 921
V ++P LLEDPVL+AIAKKH ++ A +ALRYQLQRGVVVLAKS
Sbjct: 228 VNLNHPXLLEDPVLHAIAKKHKQTSAVIALRYQLQRGVVVLAKS 271
>ref|NP_001038083.1| aldo-keto reductase family 1 member C1 [Sus scrofa].
Length = 324
Score = 253 bits (645), Expect(2) = 4e-88
Identities = 117/183 (63%), Positives = 150/183 (81%)
Frame = +3
Query: 240 VKLNDGHLMPVLGLGTLVSEGVPKSKAGEATRVAIEVGYRHIDAAYVYENEEEVGSALRE 419
+K+NDGH +P+LGLGT V KS+ A + AI++GYRHID+A++Y+NEEE+G A++
Sbjct: 10 LKMNDGHTIPMLGLGTSAPSQVLKSETEMAIKRAIDIGYRHIDSAHLYQNEEEIGRAIQM 69
Query: 420 KIADGTVKREELFYTTKLWATFFRPELVRPALERSLKKLRLDYVDLFIIHVPITMKPGEE 599
KIADGTVKR+++F+TTK+W TFFRPELV+ LERSLKKL++ YVDL+++H P ++ GE+
Sbjct: 70 KIADGTVKRDDIFHTTKVWGTFFRPELVQTNLERSLKKLQMSYVDLYLLHHPEALQAGED 129
Query: 600 LLPKDASGKVIFDTVDLRDTWAALEKCKDAGLTKSIGVSNFNHKQLEMILNKPGLKYKPV 779
PKD G +IFDTVDL TW A+EKCK+ GLT+SIGVSNFN KQLE ILNKPGLKYKPV
Sbjct: 130 FFPKDTHGNIIFDTVDLCTTWEAMEKCKNEGLTRSIGVSNFNCKQLERILNKPGLKYKPV 189
Query: 780 CNQ 788
CNQ
Sbjct: 190 CNQ 192
Score = 90.9 bits (224), Expect(2) = 4e-88
Identities = 45/56 (80%), Positives = 51/56 (91%)
Frame = +1
Query: 790 VEESNPYLLEDPVLNAIAKKHNRSPAQVALRYQLQRGVVVLAKSFNEQRIKENFQV 957
V ++ P LL+DPVLNAIA+KH R+PAQVALRYQLQRGVV LAKSF+EQRIKENFQV
Sbjct: 230 VIKNKPSLLQDPVLNAIAEKHRRTPAQVALRYQLQRGVVALAKSFSEQRIKENFQV 285
>ref|XP_003134685.2| PREDICTED: 3-oxo-5-beta-steroid 4-dehydrogenase-like [Sus scrofa].
Length = 265
Score = 232 bits (592), Expect = 2e-61
Identities = 110/184 (59%), Positives = 142/184 (77%), Gaps = 1/184 (0%)
Frame = +3
Query: 240 VKLNDGHLMPVLGLGTLVSEGV-PKSKAGEATRVAIEVGYRHIDAAYVYENEEEVGSALR 416
+ LNDG+ +P++GLGT + PK G + ++AI+ GYRHID A++Y+NE EVG A+R
Sbjct: 10 IPLNDGNSIPIIGLGTFSEPKLTPKGICGTSVKIAIDTGYRHIDGAFIYQNEHEVGEAIR 69
Query: 417 EKIADGTVKREELFYTTKLWATFFRPELVRPALERSLKKLRLDYVDLFIIHVPITMKPGE 596
EKIA+G V+RE++FY KLWAT PE+VRPALER+LK L+LDYVDL+II VP+ KPG+
Sbjct: 70 EKIAEGKVRREDIFYCGKLWATNLDPEMVRPALERTLKVLQLDYVDLYIIEVPMAFKPGD 129
Query: 597 ELLPKDASGKVIFDTVDLRDTWAALEKCKDAGLTKSIGVSNFNHKQLEMILNKPGLKYKP 776
+ PKD +GK ++ +L TW ALE CKD GL KS+GVSNFN +QLE+ILNKPGLKYKP
Sbjct: 130 DNFPKDENGKWLYCKSNLCGTWEALEACKDDGLVKSLGVSNFNRRQLELILNKPGLKYKP 189
Query: 777 VCNQ 788
V NQ
Sbjct: 190 VSNQ 193
>ref|NP_001001539.1| aldose reductase [Sus scrofa].
Length = 316
Score = 193 bits (491), Expect(2) = 3e-61
Identities = 97/181 (53%), Positives = 123/181 (67%)
Frame = +3
Query: 246 LNDGHLMPVLGLGTLVSEGVPKSKAGEATRVAIEVGYRHIDAAYVYENEEEVGSALREKI 425
L G MP+LGLGT S P K EA +VAI++GYRHID A+VY+NE EVG L+EK+
Sbjct: 7 LYTGAKMPILGLGTWKS---PPGKVTEAVKVAIDLGYRHIDCAHVYQNENEVGLGLQEKL 63
Query: 426 ADGTVKREELFYTTKLWATFFRPELVRPALERSLKKLRLDYVDLFIIHVPITMKPGEELL 605
VKRE+LF +KLW T LV+ A + +L+ L+LDY+DL++IH P KPG++
Sbjct: 64 QGQVVKREDLFIVSKLWCTDHEKNLVKGACQTTLRNLKLDYLDLYLIHWPTGFKPGKDPF 123
Query: 606 PKDASGKVIFDTVDLRDTWAALEKCKDAGLTKSIGVSNFNHKQLEMILNKPGLKYKPVCN 785
P D G V+ D D +TW A+E+ D GL K+IGVSNFNH Q+E ILNKPGLKYKP N
Sbjct: 124 PLDGDGNVVPDESDFVETWEAMEELVDEGLVKAIGVSNFNHLQVEKILNKPGLKYKPAVN 183
Query: 786 Q 788
Q
Sbjct: 184 Q 184
Score = 60.5 bits (145), Expect(2) = 3e-61
Identities = 28/54 (51%), Positives = 40/54 (74%)
Frame = +1
Query: 802 NPYLLEDPVLNAIAKKHNRSPAQVALRYQLQRGVVVLAKSFNEQRIKENFQVQD 963
+P LLEDP + AIA K+N++ AQV +R+ +QR ++V+ KS +RI ENFQV D
Sbjct: 225 DPSLLEDPRIKAIAAKYNKTTAQVLIRFPMQRNLIVIPKSVTPERIAENFQVFD 278
>ref|NP_001038033.1| 1,5-anhydro-D-fructose reductase [Sus scrofa].
Length = 288
Score = 181 bits (460), Expect(2) = 2e-59
Identities = 91/175 (52%), Positives = 118/175 (67%)
Frame = +3
Query: 264 MPVLGLGTLVSEGVPKSKAGEATRVAIEVGYRHIDAAYVYENEEEVGSALREKIADGTVK 443
+PVLGLGT + P + EA +VAI+ GYRH D AY+Y NE EVG ++ KI +G V+
Sbjct: 4 IPVLGLGTW--QAAP-GEVTEAVKVAIDTGYRHFDCAYLYHNENEVGVGIQAKIDEGVVR 60
Query: 444 REELFYTTKLWATFFRPELVRPALERSLKKLRLDYVDLFIIHVPITMKPGEELLPKDASG 623
RE+LF +KLW T + LV+ A RSLK L+L Y+DL++IH P+ KPGE LP D SG
Sbjct: 61 REDLFIVSKLWCTCHKKSLVKSACTRSLKALKLQYLDLYLIHWPMGFKPGEVDLPVDRSG 120
Query: 624 KVIFDTVDLRDTWAALEKCKDAGLTKSIGVSNFNHKQLEMILNKPGLKYKPVCNQ 788
++ D DTW A+E GL ++IGVSNFNH+QLE +LNKP L+ KPV NQ
Sbjct: 121 MIVASNTDFLDTWEAMEDLVIEGLVRAIGVSNFNHEQLERLLNKPNLRVKPVTNQ 175
Score = 65.9 bits (159), Expect(2) = 2e-59
Identities = 30/51 (58%), Positives = 40/51 (78%)
Frame = +1
Query: 811 LLEDPVLNAIAKKHNRSPAQVALRYQLQRGVVVLAKSFNEQRIKENFQVQD 963
LLEDPV+ IA+KH +S AQ+ +R+Q+QR V+V+ KS N +RI ENFQV D
Sbjct: 213 LLEDPVIQTIAQKHGKSAAQILIRFQIQRNVIVIPKSVNPKRILENFQVFD 263
>ref|NP_999055.1| alcohol dehydrogenase [NADP+] [Sus scrofa].
Length = 325
Score = 149 bits (377), Expect = 2e-36
Identities = 76/173 (43%), Positives = 110/173 (63%), Gaps = 1/173 (0%)
Frame = +3
Query: 237 CVKLNDGHLMPVLGLGTLVSEGVPKSKAGEATRVAIEVGYRHIDAAYVYENEEEVGSALR 416
CV L+ G MP++GLGT SE + A + A+ VGYRHID A +Y NE E+G AL
Sbjct: 5 CVLLHTGQKMPLIGLGTWKSE---PGQVKAAIKYALTVGYRHIDCAAIYGNELEIGEALT 61
Query: 417 EKIADG-TVKREELFYTTKLWATFFRPELVRPALERSLKKLRLDYVDLFIIHVPITMKPG 593
E + G V REELF T+KLW T PE V PAL ++L L+L+Y+DL+++H P + G
Sbjct: 62 ETVGPGKAVPREELFVTSKLWNTKHHPEDVEPALRKTLADLQLEYLDLYLMHWPYAFERG 121
Query: 594 EELLPKDASGKVIFDTVDLRDTWAALEKCKDAGLTKSIGVSNFNHKQLEMILN 752
+ PK+A G + +D +DTW ALE GL +++G+SNF+ +Q++ +L+
Sbjct: 122 DNPFPKNADGTIRYDATHYKDTWKALEALVAKGLVRALGLSNFSSRQIDDVLS 174
Score = 63.5 bits (153), Expect = 2e-10
Identities = 29/57 (50%), Positives = 42/57 (73%)
Frame = +1
Query: 793 EESNPYLLEDPVLNAIAKKHNRSPAQVALRYQLQRGVVVLAKSFNEQRIKENFQVQD 963
+ + P LLE+PV+ A+A+K+NRSPAQ+ LR+Q+QR V+ + KS RI +N QV D
Sbjct: 222 DPNEPVLLEEPVVQALAEKYNRSPAQILLRWQVQRKVICIPKSVTPSRIPQNIQVFD 278
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 24,887,916
Number of extensions: 664249
Number of successful extensions: 1894
Number of sequences better than 1.0e-05: 10
Number of HSP's gapped: 1889
Number of HSP's successfully gapped: 19
Length of query: 331
Length of database: 11,343,932
Length adjustment: 99
Effective length of query: 232
Effective length of database: 8,879,129
Effective search space: 2059957928
Effective search space used: 2059957928
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002113
(993 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr10 603 e-170
Sscrofa_Chr18 64 2e-07
>Sscrofa_Chr10
|| Length = 79102373
Score = 603 bits (304), Expect = e-170
Identities = 304/304 (100%)
Strand = Plus / Plus
Query: 1 aacccctgtagcatgcatgctgtatcctgtgaaatatgcctgcagagacttgaaagaact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71747481 aacccctgtagcatgcatgctgtatcctgtgaaatatgcctgcagagacttgaaagaact 71747540
Query: 61 agtgggacagcagtgagtcgattccagtttcactgtggaaacattggcagctgacccggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71747541 agtgggacagcagtgagtcgattccagtttcactgtggaaacattggcagctgacccggc 71747600
Query: 121 cccgcctatctttgggggttggtggggataaagtacacgtggcctgcaaacaagagaagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71747601 cccgcctatctttgggggttggtggggataaagtacacgtggcctgcaaacaagagaagg 71747660
Query: 181 aaagcaagacagagtgagcccagccggggctgtggataaagatggcactcagccgttgcg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71747661 aaagcaagacagagtgagcccagccggggctgtggataaagatggcactcagccgttgcg 71747720
Query: 241 tgaagctgaatgatgggcacctcatgcccgttcttggacttggcactctcgtctctgaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71747721 tgaagctgaatgatgggcacctcatgcccgttcttggacttggcactctcgtctctgaag 71747780
Query: 301 gggt 304
||||
Sbjct: 71747781 gggt 71747784
Score = 603 bits (304), Expect = e-170
Identities = 304/304 (100%)
Strand = Plus / Plus
Query: 1 aacccctgtagcatgcatgctgtatcctgtgaaatatgcctgcagagacttgaaagaact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72009244 aacccctgtagcatgcatgctgtatcctgtgaaatatgcctgcagagacttgaaagaact 72009303
Query: 61 agtgggacagcagtgagtcgattccagtttcactgtggaaacattggcagctgacccggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72009304 agtgggacagcagtgagtcgattccagtttcactgtggaaacattggcagctgacccggc 72009363
Query: 121 cccgcctatctttgggggttggtggggataaagtacacgtggcctgcaaacaagagaagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72009364 cccgcctatctttgggggttggtggggataaagtacacgtggcctgcaaacaagagaagg 72009423
Query: 181 aaagcaagacagagtgagcccagccggggctgtggataaagatggcactcagccgttgcg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72009424 aaagcaagacagagtgagcccagccggggctgtggataaagatggcactcagccgttgcg 72009483
Query: 241 tgaagctgaatgatgggcacctcatgcccgttcttggacttggcactctcgtctctgaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72009484 tgaagctgaatgatgggcacctcatgcccgttcttggacttggcactctcgtctctgaag 72009543
Query: 301 gggt 304
||||
Sbjct: 72009544 gggt 72009547
Score = 412 bits (208), Expect = e-112
Identities = 208/208 (100%)
Strand = Plus / Plus
Query: 786 cagggtggaagagagcaacccatatctcttagaggatccagtcttaaatgctattgccaa 845
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71756288 cagggtggaagagagcaacccatatctcttagaggatccagtcttaaatgctattgccaa 71756347
Query: 846 gaaacacaacagaagcccagcgcaggttgccctgcgctaccagctgcagcggggagtggt 905
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71756348 gaaacacaacagaagcccagcgcaggttgccctgcgctaccagctgcagcggggagtggt 71756407
Query: 906 ggtcctggccaagagcttcaatgagcagaggatcaaagagaacttccaggtacaggacaa 965
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71756408 ggtcctggccaagagcttcaatgagcagaggatcaaagagaacttccaggtacaggacaa 71756467
Query: 966 gcagtgcctctgcagggagctgctctgg 993
||||||||||||||||||||||||||||
Sbjct: 71756468 gcagtgcctctgcagggagctgctctgg 71756495
Score = 412 bits (208), Expect = e-112
Identities = 208/208 (100%)
Strand = Plus / Plus
Query: 786 cagggtggaagagagcaacccatatctcttagaggatccagtcttaaatgctattgccaa 845
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72018051 cagggtggaagagagcaacccatatctcttagaggatccagtcttaaatgctattgccaa 72018110
Query: 846 gaaacacaacagaagcccagcgcaggttgccctgcgctaccagctgcagcggggagtggt 905
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72018111 gaaacacaacagaagcccagcgcaggttgccctgcgctaccagctgcagcggggagtggt 72018170
Query: 906 ggtcctggccaagagcttcaatgagcagaggatcaaagagaacttccaggtacaggacaa 965
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72018171 ggtcctggccaagagcttcaatgagcagaggatcaaagagaacttccaggtacaggacaa 72018230
Query: 966 gcagtgcctctgcagggagctgctctgg 993
||||||||||||||||||||||||||||
Sbjct: 72018231 gcagtgcctctgcagggagctgctctgg 72018258
Score = 335 bits (169), Expect = 3e-89
Identities = 169/169 (100%)
Strand = Plus / Plus
Query: 302 ggtccctaagagcaaggctggcgaggccaccagagtggctatcgaggtaggttaccgtca 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71750384 ggtccctaagagcaaggctggcgaggccaccagagtggctatcgaggtaggttaccgtca 71750443
Query: 362 cattgatgcagcctacgtctatgaaaacgaggaggaggtgggcagcgccctgcgggagaa 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71750444 cattgatgcagcctacgtctatgaaaacgaggaggaggtgggcagcgccctgcgggagaa 71750503
Query: 422 gatcgcggatggcacggtgaagagggaggagctgttctacaccaccaag 470
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71750504 gatcgcggatggcacggtgaagagggaggagctgttctacaccaccaag 71750552
Score = 335 bits (169), Expect = 3e-89
Identities = 169/169 (100%)
Strand = Plus / Plus
Query: 302 ggtccctaagagcaaggctggcgaggccaccagagtggctatcgaggtaggttaccgtca 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72012147 ggtccctaagagcaaggctggcgaggccaccagagtggctatcgaggtaggttaccgtca 72012206
Query: 362 cattgatgcagcctacgtctatgaaaacgaggaggaggtgggcagcgccctgcgggagaa 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72012207 cattgatgcagcctacgtctatgaaaacgaggaggaggtgggcagcgccctgcgggagaa 72012266
Query: 422 gatcgcggatggcacggtgaagagggaggagctgttctacaccaccaag 470
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72012267 gatcgcggatggcacggtgaagagggaggagctgttctacaccaccaag 72012315
Score = 248 bits (125), Expect = 5e-63
Identities = 125/125 (100%)
Strand = Plus / Plus
Query: 665 ggctctggagaagtgtaaagatgcaggcttgaccaaatccatcggggtgtccaatttcaa 724
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71753806 ggctctggagaagtgtaaagatgcaggcttgaccaaatccatcggggtgtccaatttcaa 71753865
Query: 725 tcacaagcagctggagatgatcctgaacaagccagggctcaagtacaagcccgtctgcaa 784
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71753866 tcacaagcagctggagatgatcctgaacaagccagggctcaagtacaagcccgtctgcaa 71753925
Query: 785 ccagg 789
|||||
Sbjct: 71753926 ccagg 71753930
Score = 248 bits (125), Expect = 5e-63
Identities = 125/125 (100%)
Strand = Plus / Plus
Query: 665 ggctctggagaagtgtaaagatgcaggcttgaccaaatccatcggggtgtccaatttcaa 724
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72015569 ggctctggagaagtgtaaagatgcaggcttgaccaaatccatcggggtgtccaatttcaa 72015628
Query: 725 tcacaagcagctggagatgatcctgaacaagccagggctcaagtacaagcccgtctgcaa 784
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72015629 tcacaagcagctggagatgatcctgaacaagccagggctcaagtacaagcccgtctgcaa 72015688
Query: 785 ccagg 789
|||||
Sbjct: 72015689 ccagg 72015693
Score = 236 bits (119), Expect = 2e-59
Identities = 119/119 (100%)
Strand = Plus / Plus
Query: 469 agctttgggctactttctttcgacctgaattggttcgaccagccctggaaagatcactga 528
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71751707 agctttgggctactttctttcgacctgaattggttcgaccagccctggaaagatcactga 71751766
Query: 529 agaaacttcggctggattatgttgatctcttcattattcacgtgccaatcacgatgaag 587
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71751767 agaaacttcggctggattatgttgatctcttcattattcacgtgccaatcacgatgaag 71751825
Score = 236 bits (119), Expect = 2e-59
Identities = 119/119 (100%)
Strand = Plus / Plus
Query: 469 agctttgggctactttctttcgacctgaattggttcgaccagccctggaaagatcactga 528
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72013470 agctttgggctactttctttcgacctgaattggttcgaccagccctggaaagatcactga 72013529
Query: 529 agaaacttcggctggattatgttgatctcttcattattcacgtgccaatcacgatgaag 587
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72013530 agaaacttcggctggattatgttgatctcttcattattcacgtgccaatcacgatgaag 72013588
Score = 161 bits (81), Expect = 9e-37
Identities = 81/81 (100%)
Strand = Plus / Plus
Query: 586 agcctggggaggagcttctgcctaaggatgccagtgggaaagttatttttgatacggtgg 645
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71752736 agcctggggaggagcttctgcctaaggatgccagtgggaaagttatttttgatacggtgg 71752795
Query: 646 acctgcgtgacacatgggcgg 666
|||||||||||||||||||||
Sbjct: 71752796 acctgcgtgacacatgggcgg 71752816
Score = 161 bits (81), Expect = 9e-37
Identities = 81/81 (100%)
Strand = Plus / Plus
Query: 586 agcctggggaggagcttctgcctaaggatgccagtgggaaagttatttttgatacggtgg 645
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72014499 agcctggggaggagcttctgcctaaggatgccagtgggaaagttatttttgatacggtgg 72014558
Query: 646 acctgcgtgacacatgggcgg 666
|||||||||||||||||||||
Sbjct: 72014559 acctgcgtgacacatgggcgg 72014579
Score = 155 bits (78), Expect = 6e-35
Identities = 93/98 (94%)
Strand = Plus / Plus
Query: 862 ccagcgcaggttgccctgcgctaccagctgcagcggggagtggtggtcctggccaagagc 921
||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 71926995 ccagcccaggttgccctgcgctaccagctgcagcggggggtggtggccctggccaagagc 71927054
Query: 922 ttcaatgagcagaggatcaaagagaacttccaggtaca 959
|||| |||||||||||| ||||||||||||||||||||
Sbjct: 71927055 ttcagtgagcagaggatgaaagagaacttccaggtaca 71927092
Score = 155 bits (78), Expect = 6e-35
Identities = 93/98 (94%)
Strand = Plus / Plus
Query: 862 ccagcgcaggttgccctgcgctaccagctgcagcggggagtggtggtcctggccaagagc 921
||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 72102716 ccagcccaggttgccctgcgctaccagctgcagcggggggtggtggccctggccaagagc 72102775
Query: 922 ttcaatgagcagaggatcaaagagaacttccaggtaca 959
|||| |||||||||||| ||||||||||||||||||||
Sbjct: 72102776 ttcagtgagcagaggatgaaagagaacttccaggtaca 72102813
Score = 143 bits (72), Expect = 2e-31
Identities = 108/120 (90%)
Strand = Plus / Plus
Query: 670 tggagaagtgtaaagatgcaggcttgaccaaatccatcggggtgtccaatttcaatcaca 729
||||||||||||| || ||||| ||||||| |||||||| |||||||| || || |||
Sbjct: 71838774 tggagaagtgtaaggacgcaggactgaccaagtccatcggcgtgtccaactttaaccacc 71838833
Query: 730 agcagctggagatgatcctgaacaagccagggctcaagtacaagcccgtctgcaaccagg 789
| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71838834 aacagctggagaggatcctgaacaagccagggctcaagtacaagcccgtctgcaaccagg 71838893
Score = 143 bits (72), Expect = 2e-31
Identities = 108/120 (90%)
Strand = Plus / Plus
Query: 670 tggagaagtgtaaagatgcaggcttgaccaaatccatcggggtgtccaatttcaatcaca 729
||||||||||||| || ||||| ||||||| |||||||| |||||||| || || |||
Sbjct: 71870524 tggagaagtgtaaggacgcaggactgaccaagtccatcggcgtgtccaactttaaccacc 71870583
Query: 730 agcagctggagatgatcctgaacaagccagggctcaagtacaagcccgtctgcaaccagg 789
| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71870584 aacagctggagaggatcctgaacaagccagggctcaagtacaagcccgtctgcaaccagg 71870643
Score = 143 bits (72), Expect = 2e-31
Identities = 108/120 (90%)
Strand = Plus / Plus
Query: 670 tggagaagtgtaaagatgcaggcttgaccaaatccatcggggtgtccaatttcaatcaca 729
||||||||||||| || ||||| ||||||| |||||||| |||||||| || || |||
Sbjct: 71889040 tggagaagtgtaaggacgcaggactgaccaagtccatcggcgtgtccaactttaaccacc 71889099
Query: 730 agcagctggagatgatcctgaacaagccagggctcaagtacaagcccgtctgcaaccagg 789
| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71889100 aacagctggagaggatcctgaacaagccagggctcaagtacaagcccgtctgcaaccagg 71889159
Score = 143 bits (72), Expect = 2e-31
Identities = 108/120 (90%)
Strand = Plus / Plus
Query: 670 tggagaagtgtaaagatgcaggcttgaccaaatccatcggggtgtccaatttcaatcaca 729
||||||||||||| || ||||| ||||||| |||||||| |||||||| || || |||
Sbjct: 72046223 tggagaagtgtaaggacgcaggactgaccaagtccatcggcgtgtccaactttaaccacc 72046282
Query: 730 agcagctggagatgatcctgaacaagccagggctcaagtacaagcccgtctgcaaccagg 789
| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72046283 aacagctggagaggatcctgaacaagccagggctcaagtacaagcccgtctgcaaccagg 72046342
Score = 143 bits (72), Expect = 2e-31
Identities = 108/120 (90%)
Strand = Plus / Plus
Query: 670 tggagaagtgtaaagatgcaggcttgaccaaatccatcggggtgtccaatttcaatcaca 729
||||||||||||| || ||||| ||||||| |||||||| |||||||| || || |||
Sbjct: 72064735 tggagaagtgtaaggacgcaggactgaccaagtccatcggcgtgtccaactttaaccacc 72064794
Query: 730 agcagctggagatgatcctgaacaagccagggctcaagtacaagcccgtctgcaaccagg 789
| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72064795 aacagctggagaggatcctgaacaagccagggctcaagtacaagcccgtctgcaaccagg 72064854
Score = 111 bits (56), Expect = 7e-22
Identities = 80/88 (90%)
Strand = Plus / Plus
Query: 702 tccatcggggtgtccaatttcaatcacaagcagctggagatgatcctgaacaagccaggg 761
|||||||| |||||||| || || |||||||||||||| |||| ||||||||||||||
Sbjct: 71921328 tccatcggtgtgtccaactttaactgcaagcagctggagaggatcttgaacaagccaggg 71921387
Query: 762 ctcaagtacaagcccgtctgcaaccagg 789
||||||||||||||||||||||||||||
Sbjct: 71921388 ctcaagtacaagcccgtctgcaaccagg 71921415
Score = 111 bits (56), Expect = 7e-22
Identities = 80/88 (90%)
Strand = Plus / Plus
Query: 702 tccatcggggtgtccaatttcaatcacaagcagctggagatgatcctgaacaagccaggg 761
|||||||| |||||||| || || |||||||||||||| |||| ||||||||||||||
Sbjct: 72097056 tccatcggtgtgtccaactttaactgcaagcagctggagaggatcttgaacaagccaggg 72097115
Query: 762 ctcaagtacaagcccgtctgcaaccagg 789
||||||||||||||||||||||||||||
Sbjct: 72097116 ctcaagtacaagcccgtctgcaaccagg 72097143
Score = 73.8 bits (37), Expect = 2e-10
Identities = 46/49 (93%)
Strand = Plus / Plus
Query: 872 ttgccctgcgctaccagctgcagcggggagtggtggtcctggccaagag 920
||||||| ||||||||||||||||| ||||| |||||||||||||||||
Sbjct: 71843770 ttgcccttcgctaccagctgcagcgtggagttgtggtcctggccaagag 71843818
Score = 65.9 bits (33), Expect = 4e-08
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 880 cgctaccagctgcagcggggagtggtggtcctggccaagag 920
||||||||||||||||| ||||| |||||||||||||||||
Sbjct: 71892829 cgctaccagctgcagcgtggagttgtggtcctggccaagag 71892869
Score = 65.9 bits (33), Expect = 4e-08
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 880 cgctaccagctgcagcggggagtggtggtcctggccaagag 920
||||||||||||||||| ||||| |||||||||||||||||
Sbjct: 72068523 cgctaccagctgcagcgtggagttgtggtcctggccaagag 72068563
>Sscrofa_Chr18
|| Length = 61220071
Score = 63.9 bits (32), Expect = 2e-07
Identities = 65/76 (85%)
Strand = Plus / Minus
Query: 714 tccaatttcaatcacaagcagctggagatgatcctgaacaagccagggctcaagtacaag 773
||||||||||| | | |||||||||| | ||||||||||| ||||| |||||||| |||
Sbjct: 12091611 tccaatttcaaccgtaggcagctggagctcatcctgaacaaaccaggactcaagtataag 12091552
Query: 774 cccgtctgcaaccagg 789
|| ||| |||||||||
Sbjct: 12091551 ccagtcagcaaccagg 12091536
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 28,725,831
Number of extensions: 181
Number of successful extensions: 181
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 181
Number of HSP's successfully gapped: 25
Length of query: 993
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 972
Effective length of database: 2,808,413,156
Effective search space: 2729777587632
Effective search space used: 2729777587632
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 29 (58.0 bits)