Animal-Genome cDNA 20110601C-002119


Search to RefSeqBP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-002119
         (1033 letters)

Database: RefSeq49_BP.fasta 
           33,088 sequences; 17,681,374 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001116504.1| corticosteroid 11-beta-dehydrogenase isozyme...   476   e-134
Alignment   gi|NP_996852.1| hydroxysteroid 11-beta-dehydrogenase 1-like pro...   211   8e-55
Alignment   gi|NP_001039627.1| dehydrogenase/reductase SDR family member 7 ...    91   2e-18
Alignment   gi|NP_001039751.1| estradiol 17-beta-dehydrogenase 11 [Bos taur...    86   5e-17
Alignment   gi|NP_777247.1| dehydrogenase/reductase SDR family member 4 [Bo...    85   9e-17
Alignment   gi|NP_001030420.1| dehydrogenase/reductase SDR family member 7B...    81   1e-15
Alignment   gi|XP_002702202.1| PREDICTED: dehydrogenase/reductase SDR famil...    81   1e-15
Alignment   gi|NP_001039384.1| 3-ketodihydrosphingosine reductase precursor...    80   2e-15
Alignment   gi|NP_001040081.1| 17-beta-hydroxysteroid dehydrogenase 13 [Bos...    76   6e-14
Alignment   gi|NP_001192862.1| epidermal retinol dehydrogenase 2 [Bos tauru...    74   3e-13

>ref|NP_001116504.1| corticosteroid 11-beta-dehydrogenase isozyme 1 [Bos taurus].
          Length = 292

 Score =  476 bits (1224), Expect = e-134
 Identities = 244/289 (84%), Positives = 264/289 (91%)
 Frame = +1

Query: 106 MAFMKKYLLPILGIFLAYYYYSANEEFRPEMLRGKKVIVTGASKGIGREMAYHLARMGAH 285
           MAFMKKYLLPILGIFLAYYYYSANEEFRPEMLRGK+VIVTGASKGIGREMAYHLARMGAH
Sbjct: 1   MAFMKKYLLPILGIFLAYYYYSANEEFRPEMLRGKRVIVTGASKGIGREMAYHLARMGAH 60

Query: 286 VVVTARSEETLKKVVSHCLELGASSAHYVAGTMEDMTFAEQFVAKAGKLLGGLDMLILNH 465
           VVVTARSEE+LKKVVS CLELGA+SAHYVAGTME+MTFAEQFVAKAG+L+GGLDMLILNH
Sbjct: 61  VVVTARSEESLKKVVSRCLELGAASAHYVAGTMENMTFAEQFVAKAGELVGGLDMLILNH 120

Query: 466 ITHASMTPFSDDIHLVRRSMEVNFLSYVVLSVAALPMLKQSNGSIVVVSSQAGKMANPLV 645
           I +  +  FS+DIHL+RR++EVN LSYVVLS AALPMLKQ+NGSIVVVSS AGK+A PLV
Sbjct: 121 IHYTPLGVFSNDIHLLRRTLEVNLLSYVVLSTAALPMLKQTNGSIVVVSSIAGKIACPLV 180

Query: 646 APYSASKFALDGFFSSIRKEYSVTKVNVSITLCILGLIDTDTAMTAVAGILNVQPSPKEE 825
           A YSASKFALDGFFSS+R EY  TKVNVSITLCILGLIDTDTAM AVAGI N + SPKEE
Sbjct: 181 AAYSASKFALDGFFSSLRMEYEATKVNVSITLCILGLIDTDTAMKAVAGIFNAKASPKEE 240

Query: 826 CALEIIKGAALRQEEVYYDSSILTSLLLGNPGRKILEFLSLRHYNMEKF 972
           CALEIIKG  LRQ+EVYYDSSILT LLL NPGRKI+EF  L+ YNME+F
Sbjct: 241 CALEIIKGGTLRQDEVYYDSSILTPLLLRNPGRKIMEFFFLKKYNMERF 289


>ref|NP_996852.1| hydroxysteroid 11-beta-dehydrogenase 1-like protein precursor [Bos
           taurus].
          Length = 287

 Score =  211 bits (537), Expect = 8e-55
 Identities = 118/256 (46%), Positives = 161/256 (62%), Gaps = 1/256 (0%)
 Frame = +1

Query: 115 MKKYLLPILG-IFLAYYYYSANEEFRPEMLRGKKVIVTGASKGIGREMAYHLARMGAHVV 291
           MK  LL  LG +F AYY+   ++ F P  L G +V++TG S GIG E+AYH AR+G+H+V
Sbjct: 1   MKVLLLTGLGALFFAYYW---DDNFDPASLHGARVLLTGVSAGIGEELAYHYARLGSHLV 57

Query: 292 VTARSEETLKKVVSHCLELGASSAHYVAGTMEDMTFAEQFVAKAGKLLGGLDMLILNHIT 471
           +TA +E  L++VV +C +LGA    Y+A  M      E+ V  A   LGGLD L+LNH+ 
Sbjct: 58  LTAHTEALLQQVVGNCRKLGAPKVFYIAADMASPEVPERVVQFALDKLGGLDYLVLNHLG 117

Query: 472 HASMTPFSDDIHLVRRSMEVNFLSYVVLSVAALPMLKQSNGSIVVVSSQAGKMANPLVAP 651
            A            R  M++NFLSYV L+ +ALP L  S GS+VVVSS  G++     +P
Sbjct: 118 AAPAGTRVRSSQSTRWLMQMNFLSYVQLTSSALPSLTDSKGSLVVVSSLLGRVPTSFSSP 177

Query: 652 YSASKFALDGFFSSIRKEYSVTKVNVSITLCILGLIDTDTAMTAVAGILNVQPSPKEECA 831
           YSA+KFALD FFSS+R+E  V +VNV+IT+C+LGL D  +A   V GI  V+ +P  + A
Sbjct: 178 YSAAKFALDSFFSSLRRELDVQEVNVAITMCVLGLRDRASAAEGVRGITRVRAAPGPKAA 237

Query: 832 LEIIKGAALRQEEVYY 879
           L +I+G A R   V+Y
Sbjct: 238 LAVIRGGATRASGVFY 253


>ref|NP_001039627.1| dehydrogenase/reductase SDR family member 7 [Bos taurus].
          Length = 339

 Score = 90.5 bits (223), Expect = 2e-18
 Identities = 67/205 (32%), Positives = 107/205 (52%), Gaps = 5/205 (2%)
 Frame = +1

Query: 187 RPEM-LRGKKVIVTGASKGIGREMAYHLARMGAHVVVTARSEETLKKVVSHCLELGASSA 363
           RPE  L    V VTGAS GIG E+AY L+++G  +V++AR    L++V   CLE G    
Sbjct: 43  RPEWELTDMVVWVTGASSGIGEELAYQLSKLGVSLVLSARRMHELERVKRKCLENGNLKE 102

Query: 364 HYVAGTMEDMT--FAEQFVAKAG-KLLGGLDMLILNHITHASMTPFSDDIHLVRRSMEVN 534
             +     D+T   + +   KA  +  G +D+L+ N             + + +  +E+N
Sbjct: 103 KDILILPLDLTDRSSHEMATKAVLQEFGRIDILVNNGGVSQRALCVDTSLDVFKELIELN 162

Query: 535 FLSYVVLSVAALP-MLKQSNGSIVVVSSQAGKMANPLVAPYSASKFALDGFFSSIRKEYS 711
           +L  V L+   LP M+++  G IV V+S  G +A PL   Y ASK AL GFF+++R E +
Sbjct: 163 YLGTVSLTKCVLPHMIERKQGKIVTVNSMVGIIAAPLSTGYCASKHALRGFFNTLRSELA 222

Query: 712 VTKVNVSITLCILGLIDTDTAMTAV 786
            T   ++I+    G + ++    A+
Sbjct: 223 -TYPGITISNICPGPVQSNIVKNAL 246


>ref|NP_001039751.1| estradiol 17-beta-dehydrogenase 11 [Bos taurus].
          Length = 316

 Score = 85.9 bits (211), Expect = 5e-17
 Identities = 70/261 (26%), Positives = 125/261 (47%), Gaps = 6/261 (2%)
 Frame = +1

Query: 127 LLPILGIFLAYYYYSANEEFRPEMLRGKKVIVTGASKGIGREMAYHLARMGAHVVVTARS 306
           LLP L + +           + + + G+ V++TGA  GIGR+ AY  A++   +V+   +
Sbjct: 26  LLPFLLVCIVESLLKLFIPKKRKSVTGEIVLITGAGHGIGRQTAYEFAKLKCKLVLWDIN 85

Query: 307 EETLKKVVSHCLELGASSAHYVAGTMEDMTFAEQFVAKAGKL---LGGLDMLILNHITHA 477
           +  L++  + C  LGA +  +V     D +  E   + A K+   +G + +L+ N     
Sbjct: 86  KHGLEETATECKRLGAKAHTFVV----DCSNREDIYSSAKKVKAEVGDVSILVNNAGVVY 141

Query: 478 SMTPFSDDIHLVRRSMEVNFLSYVVLSVAALP-MLKQSNGSIVVVSSQAGKMANPLVAPY 654
           +   F+     + ++ EVN L++   + A LP M+K ++G IV V+S AG    P +  Y
Sbjct: 142 TSDLFATQDPQIEKTFEVNILAHFWTTKAFLPEMMKNNHGHIVTVASAAGHTGVPFLLAY 201

Query: 655 SASKFALDGFFSSIRKEYSVTKVNVSITLCIL-GLIDTDTAMTAVAGI-LNVQPSPKEEC 828
            +SKFA  GF  ++ +E S  K     T C+    I+T         +   ++P   EE 
Sbjct: 202 CSSKFAAVGFHKALTEELSALKRTGVKTTCLCPNFINTGFIKNPSTSLGPTLEP---EEV 258

Query: 829 ALEIIKGAALRQEEVYYDSSI 891
             ++I G    Q+ ++  SS+
Sbjct: 259 VNKLIDGILTEQKMIFVPSSL 279


>ref|NP_777247.1| dehydrogenase/reductase SDR family member 4 [Bos taurus].
          Length = 260

 Score = 85.1 bits (209), Expect = 9e-17
 Identities = 70/201 (34%), Positives = 106/201 (52%), Gaps = 8/201 (3%)
 Frame = +1

Query: 187 RPEMLRGKKVIVTGASKGIGREMAYHLARMGAHVVVTARSEETLKKVVSHCLELGASSAH 366
           R   L  K  +VT ++ GIG  +A  LA+ GAHVVV++R ++ + + V+     G S   
Sbjct: 8   RRNPLDNKVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDRAVATLKGEGLSVTG 67

Query: 367 YV--AGTMEDMTFAEQFVAKAGKLLGGLDMLILNHITHASMTPFSDDI-----HLVRRSM 525
            V   G  ED    E+ VA A KL GG+D+LI N    A+++PF   +      +  + +
Sbjct: 68  TVCHVGKAED---RERLVATAVKLHGGVDILISN----AAVSPFFGSLMDVPEEVWDKIL 120

Query: 526 EVNFLSYVVLSVAALP-MLKQSNGSIVVVSSQAGKMANPLVAPYSASKFALDGFFSSIRK 702
           +VN  +  +L+ A +P M K+  GSIV+VSS A     P + PY+ SK AL G   ++  
Sbjct: 121 DVNVKATALLTKAVVPEMAKRGGGSIVIVSSIAAYSPFPSLGPYNVSKTALLGLTKNLAL 180

Query: 703 EYSVTKVNVSITLCILGLIDT 765
           E  + + NV +     GLI T
Sbjct: 181 E--LAESNVRVNCLAPGLIRT 199


>ref|NP_001030420.1| dehydrogenase/reductase SDR family member 7B [Bos taurus].
          Length = 325

 Score = 81.3 bits (199), Expect = 1e-15
 Identities = 65/207 (31%), Positives = 105/207 (50%), Gaps = 11/207 (5%)
 Frame = +1

Query: 199 LRGKKVIVTGASKGIGREMAYHLARMGAHVVVTARSEETLKKVVSHCLELGASSA----- 363
           +R   V++TGA+ G+GRE A      GA +V+  R+ E L+++     EL AS A     
Sbjct: 50  VRNAVVVITGATSGLGRECARVFHAAGARLVLCGRNAEALEELSQ---ELAASRAPGVQT 106

Query: 364 HYVAGTMEDMTFAEQFVAKAGKLL---GGLDMLILNH--ITHASMTPFSDDIHLVRRSME 528
           H       D+         A ++L   G +D+LI N       ++   S D+   +R ME
Sbjct: 107 HKPCTVTFDLADPGAIAGAASEILQCFGHVDVLINNAGISYRGAIVDTSPDVD--KRVME 164

Query: 529 VNFLSYVVLSVAALP-MLKQSNGSIVVVSSQAGKMANPLVAPYSASKFALDGFFSSIRKE 705
            N+   V L+ A LP M+++  G +V +SS  GK++ P  + Y+ASK A   FF  +R E
Sbjct: 165 TNYFGPVALTKALLPAMIRRRQGHVVAISSIQGKISLPFRSAYAASKHATQAFFDCLRAE 224

Query: 706 YSVTKVNVSITLCILGLIDTDTAMTAV 786
             V + ++ +T+   G I T+ ++ AV
Sbjct: 225 --VEQHDIEVTVISPGYIHTNLSLNAV 249


>ref|XP_002702202.1| PREDICTED: dehydrogenase/reductase SDR family member 7B-like [Bos
           taurus].
          Length = 325

 Score = 81.3 bits (199), Expect = 1e-15
 Identities = 65/207 (31%), Positives = 105/207 (50%), Gaps = 11/207 (5%)
 Frame = +1

Query: 199 LRGKKVIVTGASKGIGREMAYHLARMGAHVVVTARSEETLKKVVSHCLELGASSA----- 363
           +R   V++TGA+ G+GRE A      GA +V+  R+ E L+++     EL AS A     
Sbjct: 50  VRNAVVVITGATSGLGRECARVFHAAGARLVLCGRNAEALEELSQ---ELAASRAPEVQT 106

Query: 364 HYVAGTMEDMTFAEQFVAKAGKLL---GGLDMLILNH--ITHASMTPFSDDIHLVRRSME 528
           H       D+         A ++L   G +D+LI N       ++   S D+   +R ME
Sbjct: 107 HKPCTVTFDLADPGAIAGAASEILQCFGHVDVLINNAGISYRGAIVDTSPDVD--KRVME 164

Query: 529 VNFLSYVVLSVAALP-MLKQSNGSIVVVSSQAGKMANPLVAPYSASKFALDGFFSSIRKE 705
            N+   V L+ A LP M+++  G +V +SS  GK++ P  + Y+ASK A   FF  +R E
Sbjct: 165 TNYFGPVALTKALLPAMIRRRQGHVVAISSIQGKISLPFRSAYAASKHATQAFFDCLRAE 224

Query: 706 YSVTKVNVSITLCILGLIDTDTAMTAV 786
             V + ++ +T+   G I T+ ++ AV
Sbjct: 225 --VEQHDIEVTVISPGYIHTNLSLNAV 249


>ref|NP_001039384.1| 3-ketodihydrosphingosine reductase precursor [Bos taurus].
          Length = 331

 Score = 80.5 bits (197), Expect = 2e-15
 Identities = 67/218 (30%), Positives = 105/218 (48%), Gaps = 6/218 (2%)
 Frame = +1

Query: 136 ILGIFLAYYYYSANEEFRPEMLRGKKVIVTGASKGIGREMAYHLARMGAHVVVTARSEET 315
           ++   L  Y  S     +P  L G  V+VTG S GIG+ +A    + GA + + AR+E+ 
Sbjct: 9   LVAFVLLLYMVSPLISPKPLALPGAHVVVTGGSSGIGKCIAIECYKQGAFITLVARNEDK 68

Query: 316 L----KKVVSHCLELGASSAHYVAGTMEDMTFAEQFVAKAGKLLGGLDMLILNHITHASM 483
           L    K++  H +              +D +  E  + +A + LG +DML+ N    +  
Sbjct: 69  LLQAKKEIEKHSINDKQVVLCISVDVSQDYSQVENVIKQAQEKLGPVDMLV-NCAGMSLS 127

Query: 484 TPFSD-DIHLVRRSMEVNFLSYVVLSVAALPMLKQSN-GSIVVVSSQAGKMANPLVAPYS 657
             F D ++    R M +N+L  V  S A +  +K+   G +V VSSQAG++       YS
Sbjct: 128 GKFEDLEVSTFERLMSINYLGSVYPSRAVIATMKERRMGRVVFVSSQAGQLGLFGYTAYS 187

Query: 658 ASKFALDGFFSSIRKEYSVTKVNVSITLCILGLIDTDT 771
           +SKFAL G   +++ E  V   NV +T+      DTDT
Sbjct: 188 SSKFALRGLAEALQME--VKPYNVYVTVAYPP--DTDT 221


>ref|NP_001040081.1| 17-beta-hydroxysteroid dehydrogenase 13 [Bos taurus].
          Length = 300

 Score = 75.9 bits (185), Expect = 6e-14
 Identities = 57/200 (28%), Positives = 104/200 (52%), Gaps = 7/200 (3%)
 Frame = +1

Query: 127 LLPILGIFLAYYYYSANEEFRP---EMLRGKKVIVTGASKGIGREMAYHLARMGAHVVVT 297
           LL +L I +  Y  S  + F P   + + G+ V++TGA  GIGR+ AY  A+  + +V+ 
Sbjct: 7   LLLLLLIIIYSYLESLVKVFIPRRRKSVAGEIVLITGAGHGIGRQTAYEFAKRKSRLVLW 66

Query: 298 ARSEETLKKVVSHCLELGASSAHYVAGTMEDMTFAEQF---VAKAGKLLGGLDMLILNHI 468
             ++  +++  + C +LGA++  +V     D +  E+    V +  K +G + +++ N  
Sbjct: 67  DINKHGVEETAAECRKLGATTHVFVV----DCSNREEIYSSVNQVKKEVGDVTIVVNNAG 122

Query: 469 THASMTPFSDDIHLVRRSMEVNFLSYVVLSVAALP-MLKQSNGSIVVVSSQAGKMANPLV 645
                   S     + ++ EVN L +  ++ A LP M+++++G IV V+S  G    P +
Sbjct: 123 AIYPADLLSTKDEEITKTFEVNILGHFWITKALLPSMIRRNHGHIVTVASVCGHGVIPYL 182

Query: 646 APYSASKFALDGFFSSIRKE 705
            PY +SKFA  GF  ++  E
Sbjct: 183 IPYCSSKFAAVGFHRALTSE 202


>ref|NP_001192862.1| epidermal retinol dehydrogenase 2 [Bos taurus].
          Length = 309

 Score = 73.6 bits (179), Expect = 3e-13
 Identities = 65/228 (28%), Positives = 110/228 (48%), Gaps = 4/228 (1%)
 Frame = +1

Query: 205 GKKVIVTGASKGIGREMAYHLARMGAHVVVTARSEETLKKVVSHCLELGASSAHYVAGTM 384
           G+ V++TGA  G+GR +A   A++G+ +V+   S+E+ ++     +E GA+  +      
Sbjct: 40  GEIVLITGAGSGLGRLLALKFAQLGSVLVLWDISQESNEETCKMAVEAGATRVYAYTCDC 99

Query: 385 EDMTFAEQFVAKAGKLLGGLDMLILNH--ITHASMTPFSDDIHLVRRSMEVNFLSYVVLS 558
                  +   +  K +G   +LI N   +T        D+  L+ +S++VNF S++   
Sbjct: 100 SRKEEIYRVANQVKKEVGDASILINNAGIVTGRKFMDCPDE--LIEKSLDVNFKSHIWTY 157

Query: 559 VAALP-MLKQSNGSIVVVSSQAGKMANPLVAPYSASKFALDGFFSSIRKE-YSVTKVNVS 732
            A LP M+  + G +V +SS AG +    +A Y ASKFA  GF  SI  E ++  +  + 
Sbjct: 158 KAFLPAMIANNRGHLVCISSSAGLIGMNGLADYCASKFAAYGFAESIFLESFTKGQNGIK 217

Query: 733 ITLCILGLIDTDTAMTAVAGILNVQPSPKEECALEIIKGAALRQEEVY 876
            T+     I T        G  ++ P  + E A+  I  A L QE +Y
Sbjct: 218 TTIVCPFFIKTGMFDGCTTGCPSLLPILEPEYAVRKIVDAIL-QENMY 264


  Database: RefSeq49_BP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 17,681,374
  Number of sequences in database:  33,088
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 41,825,486
Number of extensions: 1175388
Number of successful extensions: 3833
Number of sequences better than 1.0e-05: 36
Number of HSP's gapped: 3795
Number of HSP's successfully gapped: 36
Length of query: 344
Length of database: 17,681,374
Length adjustment: 103
Effective length of query: 241
Effective length of database: 14,273,310
Effective search space: 3439867710
Effective search space used: 3439867710
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)

Search to RefSeqCP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-002119
         (1033 letters)

Database: RefSeq49_CP.fasta 
           33,336 sequences; 18,874,504 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001005756.1| corticosteroid 11-beta-dehydrogenase isozyme...   481   e-136
Alignment   gi|XP_542145.2| PREDICTED: similar to short-chain dehydrogenase...   188   8e-48
Alignment   gi|XP_868441.1| PREDICTED: similar to short-chain dehydrogenase...   110   2e-24
Alignment   gi|XP_537465.2| PREDICTED: similar to Dehydrogenase/reductase S...    91   2e-18
Alignment   gi|XP_544970.2| PREDICTED: similar to dehydrogenase/reductase (...    84   2e-16
Alignment   gi|NP_001041699.1| dehydrogenase/reductase SDR family member 4 ...    82   6e-16
Alignment   gi|XP_536670.2| PREDICTED: similar to CG7601-PA [Canis familiar...    82   1e-15
Alignment   gi|XP_535646.2| PREDICTED: similar to alcohol dehydrogenase PAN...    79   9e-15
Alignment   gi|XP_850000.1| PREDICTED: similar to hydroxysteroid (17-beta) ...    79   9e-15
Alignment   gi|XP_852048.1| PREDICTED: similar to follicular lymphoma varia...    75   1e-13

>ref|NP_001005756.1| corticosteroid 11-beta-dehydrogenase isozyme 1 [Canis lupus
           familiaris].
          Length = 293

 Score =  481 bits (1238), Expect = e-136
 Identities = 247/290 (85%), Positives = 269/290 (92%), Gaps = 1/290 (0%)
 Frame = +1

Query: 106 MAFMKKYLLPILGIFLAYYYYSANEEFRPEMLRGKKVIVTGASKGIGREMAYHLARMGAH 285
           MAF KKYL P+LG FLAYYYYSANEEFRPEML+GKKVIVTGASKGIG +MAYHLA+MGAH
Sbjct: 1   MAFKKKYLPPLLGFFLAYYYYSANEEFRPEMLQGKKVIVTGASKGIGEQMAYHLAKMGAH 60

Query: 286 VVVTARSEETLKKVVSHCLELGASSAHYVAGTMEDMTFAEQFVAKAGKLLGGLDMLILNH 465
           VVVTARS+ETLKKVVSHCLELGA+SAHY+ GTMEDMTFAEQFVAKAGKL+GGLDMLILNH
Sbjct: 61  VVVTARSKETLKKVVSHCLELGAASAHYIPGTMEDMTFAEQFVAKAGKLMGGLDMLILNH 120

Query: 466 ITHASMTPFSDDIHLVRRSMEVNFLSYVVLSVAALPMLKQSNGSIVVVSSQAGKMANPLV 645
           IT+ SM  FS DIHLVRRSMEVNFLSYVVLS AALPMLKQSNGSIVVVSS+AGKM++PLV
Sbjct: 121 ITNTSMNLFSGDIHLVRRSMEVNFLSYVVLSAAALPMLKQSNGSIVVVSSKAGKMSSPLV 180

Query: 646 APYSASKFALDGFFSSIRKEYSVTKVNVSITLCILGLIDTDTAMTAVAGILN-VQPSPKE 822
           APYSASKFALDGFFSS+R E+SVTKVNVSITLCILGLI+TDTAM AV+GIL+ V  S KE
Sbjct: 181 APYSASKFALDGFFSSVRMEHSVTKVNVSITLCILGLINTDTAMKAVSGILSTVGASSKE 240

Query: 823 ECALEIIKGAALRQEEVYYDSSILTSLLLGNPGRKILEFLSLRHYNMEKF 972
           ECALEIIKG ALRQEEVYYD+S+ T+ LLGNPGRKILEFLSLR Y ++KF
Sbjct: 241 ECALEIIKGGALRQEEVYYDNSVWTAFLLGNPGRKILEFLSLRSYKLDKF 290


>ref|XP_542145.2| PREDICTED: similar to short-chain dehydrogenase/reductase 10
           isoform e isoform 1 [Canis familiaris].
          Length = 223

 Score =  188 bits (477), Expect = 8e-48
 Identities = 106/224 (47%), Positives = 139/224 (62%)
 Frame = +1

Query: 115 MKKYLLPILGIFLAYYYYSANEEFRPEMLRGKKVIVTGASKGIGREMAYHLARMGAHVVV 294
           MK  LL  LG     YY+  N  F P  L+G +V++TGAS G+G E+AYH AR+G+H+V+
Sbjct: 1   MKVLLLTGLGALFFSYYWDDN--FDPASLQGARVLLTGASAGVGEELAYHYARLGSHLVL 58

Query: 295 TARSEETLKKVVSHCLELGASSAHYVAGTMEDMTFAEQFVAKAGKLLGGLDMLILNHITH 474
           TA +E  L+KVV +C +LGA    Y+A  M       + V  A   LGGLD L+LNH+  
Sbjct: 59  TAHTEAFLQKVVGNCRKLGAPEVFYIAADMASPEVPGRVVQFALDKLGGLDYLVLNHLGA 118

Query: 475 ASMTPFSDDIHLVRRSMEVNFLSYVVLSVAALPMLKQSNGSIVVVSSQAGKMANPLVAPY 654
                 S  I   R  ++VN LSYV L+  ALP L  S GS+VVVSS  G++     +PY
Sbjct: 119 TPAGTRSRSIQGTRWLLQVNLLSYVQLTSLALPSLTDSRGSLVVVSSLLGRVPTSFSSPY 178

Query: 655 SASKFALDGFFSSIRKEYSVTKVNVSITLCILGLIDTDTAMTAV 786
           SA+KFALDGFF S+R+E  V  VNV+IT+C+LGL D  +A  AV
Sbjct: 179 SAAKFALDGFFGSLRRELDVQDVNVAITMCVLGLRDRASAAEAV 222


>ref|XP_868441.1| PREDICTED: similar to short-chain dehydrogenase/reductase 10
           isoform a isoform 2 [Canis familiaris].
          Length = 142

 Score =  110 bits (275), Expect = 2e-24
 Identities = 60/117 (51%), Positives = 76/117 (64%)
 Frame = +1

Query: 436 GGLDMLILNHITHASMTPFSDDIHLVRRSMEVNFLSYVVLSVAALPMLKQSNGSIVVVSS 615
           GGLD L+LNH+        S  I   R  ++VN LSYV L+  ALP L  S GS+VVVSS
Sbjct: 25  GGLDYLVLNHLGATPAGTRSRSIQGTRWLLQVNLLSYVQLTSLALPSLTDSRGSLVVVSS 84

Query: 616 QAGKMANPLVAPYSASKFALDGFFSSIRKEYSVTKVNVSITLCILGLIDTDTAMTAV 786
             G++     +PYSA+KFALDGFF S+R+E  V  VNV+IT+C+LGL D  +A  AV
Sbjct: 85  LLGRVPTSFSSPYSAAKFALDGFFGSLRRELDVQDVNVAITMCVLGLRDRASAAEAV 141


>ref|XP_537465.2| PREDICTED: similar to Dehydrogenase/reductase SDR family member 7
           precursor (Retinal short-chain dehydrogenase/reductase
           4) (retSDR4) [Canis familiaris].
          Length = 437

 Score = 90.5 bits (223), Expect = 2e-18
 Identities = 62/178 (34%), Positives = 95/178 (53%), Gaps = 5/178 (2%)
 Frame = +1

Query: 187 RPEMLRGKKVI-VTGASKGIGREMAYHLARMGAHVVVTARSEETLKKVVSHCLELGASSA 363
           RPE      VI VTGAS GIG E+ Y L+++G  +V++AR  + L++V   CLE G    
Sbjct: 141 RPEWELTDMVIWVTGASSGIGEELVYQLSKLGVSLVLSARRVQELERVKRRCLENGILKE 200

Query: 364 HYVAGTMEDMTFAEQFVAKAGKLL---GGLDMLILNHITHASMTPFSDDIHLVRRSMEVN 534
             +     D+T      A    +L   G +D+L+ N            ++ + +  ME+N
Sbjct: 201 KDIFVLPLDLTDRSSHEAATKAVLQEFGKIDILVNNGGQSQRSLCVDTNLDVFKELMELN 260

Query: 535 FLSYVVLSVAALP-MLKQSNGSIVVVSSQAGKMANPLVAPYSASKFALDGFFSSIRKE 705
           +L  V L++  LP M+++  G IV V+S  G ++ PL + Y ASK AL GFF+ +R E
Sbjct: 261 YLGTVSLTMCVLPHMIERKQGKIVTVNSLLGIISAPLSSGYCASKHALRGFFNCLRVE 318


>ref|XP_544970.2| PREDICTED: similar to dehydrogenase/reductase (SDR family) member 8
           [Canis familiaris].
          Length = 300

 Score = 84.3 bits (207), Expect = 2e-16
 Identities = 72/262 (27%), Positives = 124/262 (47%), Gaps = 8/262 (3%)
 Frame = +1

Query: 130 LPILGIFLAYYYYSANEEFRPEMLRGKKVIVTGASKGIGREMAYHLARMGAHVVVTARSE 309
           LP+L IF            + + + G+ V++TGA  GIGR  AY  A++ + +V+   ++
Sbjct: 11  LPLLIIFTLESLLKLFIPKKRKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINK 70

Query: 310 ETLKKVVSHCLELGASSAHYVAGTMEDMTFAEQFVAKAGKL---LGGLDMLILNHITHAS 480
             ++   + C  LGA    +V     D +  E     A K+   +G + +L+ N     +
Sbjct: 71  HGIEDTAAECRRLGAKVHAFVV----DCSNREDIYGSATKVKAEVGDVSILVNNAGVVYT 126

Query: 481 MTPFSDDIHLVRRSMEVNFLSYVVLSVAALP-MLKQSNGSIVVVSSQAGKMANPLVAPYS 657
              F+     + ++ EVN L++   + A LP M+K ++G IV V+S AG    P +  Y 
Sbjct: 127 SDLFATQDPQIEKTFEVNVLAHFWTTKAFLPVMMKNNHGHIVTVASAAGHTGVPFLLAYC 186

Query: 658 ASKFALDGFFSSIRKEY-SVTKVNVSITLCILGLIDT---DTAMTAVAGILNVQPSPKEE 825
           +SKFA  GF  ++ +E  ++ +  V  T      I+T     A TA+  IL       EE
Sbjct: 187 SSKFAAVGFHKALTEELAALERTGVKTTCLCPNFINTGFIKNASTALGPILE-----PEE 241

Query: 826 CALEIIKGAALRQEEVYYDSSI 891
              +++ G    Q+ ++  SSI
Sbjct: 242 VVDKLLNGILTEQKMIFIPSSI 263


>ref|NP_001041699.1| dehydrogenase/reductase SDR family member 4 [Canis lupus
           familiaris].
          Length = 255

 Score = 82.4 bits (202), Expect = 6e-16
 Identities = 65/201 (32%), Positives = 106/201 (52%), Gaps = 8/201 (3%)
 Frame = +1

Query: 187 RPEMLRGKKVIVTGASKGIGREMAYHLARMGAHVVVTARSEETLKKVVSHCLELGASSAH 366
           R + L  K  +VT ++ GIG  +A  LAR GAHVVV++R +  + + V+     G S   
Sbjct: 3   RQDPLANKVALVTASTDGIGFAIARRLARDGAHVVVSSRKQHNVDRAVAALQGEGLSVTG 62

Query: 367 YV--AGTMEDMTFAEQFVAKAGKLLGGLDMLILNHITHASMTPFSDDIHLVR-----RSM 525
            V   G  ED    E+ VA A  L GG+D+LI N    A++ PF  ++  V      + +
Sbjct: 63  TVCHVGKAED---RERLVATAVNLHGGIDILISN----AAVNPFFGNLMDVTEEVWDKIL 115

Query: 526 EVNFLSYVVLSVAALP-MLKQSNGSIVVVSSQAGKMANPLVAPYSASKFALDGFFSSIRK 702
           ++N  +  +++ A +P M K+  GS+V+V+S    +  P + PY+ SK AL G   ++ +
Sbjct: 116 DINVKATALMTKAVVPEMEKRGGGSVVIVASIGAYLPFPGLGPYNVSKTALLGLTKNLAR 175

Query: 703 EYSVTKVNVSITLCILGLIDT 765
           E  + + N+ +     GLI T
Sbjct: 176 E--LDQRNIRVNCLAPGLIKT 194


>ref|XP_536670.2| PREDICTED: similar to CG7601-PA [Canis familiaris].
          Length = 325

 Score = 81.6 bits (200), Expect = 1e-15
 Identities = 64/205 (31%), Positives = 103/205 (50%), Gaps = 9/205 (4%)
 Frame = +1

Query: 199 LRGKKVIVTGASKGIGREMAYHLARMGAHVVVTARSEETLKKVVSHCLELGASSA----- 363
           LR   V++TGA+ G+GRE A      GA +V+  R+++ L+++     EL AS A     
Sbjct: 50  LRNAVVVITGATSGLGRECARVFYTAGAKLVLCGRNQKALEELTK---ELTASPATKVQT 106

Query: 364 HYVAGTMEDMTFAEQFVAKAGKLL---GGLDMLILNHITHASMTPFSDDIHLVRRSMEVN 534
           H       D+      +A   ++L   G +D+LI N               + ++ ME N
Sbjct: 107 HKPYMVTFDLADPGAIIAATAEILQCFGYVDVLINNAGISYRGAIVDTTTDVDKKVMETN 166

Query: 535 FLSYVVLSVAALP-MLKQSNGSIVVVSSQAGKMANPLVAPYSASKFALDGFFSSIRKEYS 711
           +   V L+ A LP M+K+  G IVV+SS  GK++ P  + Y+ASK A   FF  +R E  
Sbjct: 167 YFGPVALTKALLPSMIKRRQGHIVVISSIQGKISIPFRSAYAASKHATQAFFDCLRAE-- 224

Query: 712 VTKVNVSITLCILGLIDTDTAMTAV 786
           + +  + +T+   G I T+ ++ AV
Sbjct: 225 MEQYEIEVTVISPGYIHTNLSLNAV 249


>ref|XP_535646.2| PREDICTED: similar to alcohol dehydrogenase PAN1B-like isoform 1
           [Canis familiaris].
          Length = 271

 Score = 78.6 bits (192), Expect = 9e-15
 Identities = 60/212 (28%), Positives = 106/212 (50%), Gaps = 5/212 (2%)
 Frame = +1

Query: 127 LLPILGIFLAYYYYSANEEF--RPEMLRGKKVIVTGASKGIGREMAYHLARMGAHVVVTA 300
           LL +L I  +Y        F  + + + G+ V++TGA  GIGR  AY  A+  + +V+  
Sbjct: 8   LLLLLTIIYSYLEALVKVFFPRKRKSVAGEIVLITGAGHGIGRWTAYEFAKQKSRLVLWD 67

Query: 301 RSEETLKKVVSHCLELGASSAHYVA--GTMEDMTFAEQFVAKAGKLLGGLDMLILNHITH 474
            ++  +++  + C +LGA+   +V   G  ED+  +   V +  K +G + +L+ N  T 
Sbjct: 68  INKHGVEETAAECRKLGATVHTFVVDCGNREDIYNS---VKQVKKEVGDVTILVNNAGTV 124

Query: 475 ASMTPFSDDIHLVRRSMEVNFLSYVVLSVAALP-MLKQSNGSIVVVSSQAGKMANPLVAP 651
                 S     + ++ E+N L +  ++ A LP M+K+++G IV V+S  G    P + P
Sbjct: 125 YPADLLSTKDEEITKTFEINILGHFWITKALLPSMIKRNHGHIVTVASVCGHGVIPYLIP 184

Query: 652 YSASKFALDGFFSSIRKEYSVTKVNVSITLCI 747
           Y +SKFA  GF  ++  E     +    T C+
Sbjct: 185 YCSSKFAAVGFHRALTLELQTLGITGIKTSCL 216


>ref|XP_850000.1| PREDICTED: similar to hydroxysteroid (17-beta) dehydrogenase 13
           isoform 2 [Canis familiaris].
          Length = 300

 Score = 78.6 bits (192), Expect = 9e-15
 Identities = 60/212 (28%), Positives = 106/212 (50%), Gaps = 5/212 (2%)
 Frame = +1

Query: 127 LLPILGIFLAYYYYSANEEF--RPEMLRGKKVIVTGASKGIGREMAYHLARMGAHVVVTA 300
           LL +L I  +Y        F  + + + G+ V++TGA  GIGR  AY  A+  + +V+  
Sbjct: 8   LLLLLTIIYSYLEALVKVFFPRKRKSVAGEIVLITGAGHGIGRWTAYEFAKQKSRLVLWD 67

Query: 301 RSEETLKKVVSHCLELGASSAHYVA--GTMEDMTFAEQFVAKAGKLLGGLDMLILNHITH 474
            ++  +++  + C +LGA+   +V   G  ED+  +   V +  K +G + +L+ N  T 
Sbjct: 68  INKHGVEETAAECRKLGATVHTFVVDCGNREDIYNS---VKQVKKEVGDVTILVNNAGTV 124

Query: 475 ASMTPFSDDIHLVRRSMEVNFLSYVVLSVAALP-MLKQSNGSIVVVSSQAGKMANPLVAP 651
                 S     + ++ E+N L +  ++ A LP M+K+++G IV V+S  G    P + P
Sbjct: 125 YPADLLSTKDEEITKTFEINILGHFWITKALLPSMIKRNHGHIVTVASVCGHGVIPYLIP 184

Query: 652 YSASKFALDGFFSSIRKEYSVTKVNVSITLCI 747
           Y +SKFA  GF  ++  E     +    T C+
Sbjct: 185 YCSSKFAAVGFHRALTLELQTLGITGIKTSCL 216


>ref|XP_852048.1| PREDICTED: similar to follicular lymphoma variant translocation 1
           [Canis familiaris].
          Length = 509

 Score = 75.1 bits (183), Expect = 1e-13
 Identities = 60/203 (29%), Positives = 96/203 (47%), Gaps = 6/203 (2%)
 Frame = +1

Query: 124 YLLPILGIFLAYYYYSANEEFRPEMLRGKKVIVTGASKGIGREMAYHLARMGAHVVVTAR 303
           Y+L +L  F+  Y +  N   R          VTG S GIG+ +A    + GA + + AR
Sbjct: 120 YVLLLLADFVVNYNHENNSSMRNS--------VTGGSSGIGKCIAIECYKQGAFITLVAR 171

Query: 304 SEETL----KKVVSHCLELGASSAHYVAGTMEDMTFAEQFVAKAGKLLGGLDMLILNHIT 471
           +E+ L    K++  H +              +D +  E  + +A + LG +DML+ N   
Sbjct: 172 NEDKLLQAKKEIEKHSINDKQVVLCISVDVSQDYSQVENVIKQAQEKLGPVDMLV-NCAG 230

Query: 472 HASMTPFSD-DIHLVRRSMEVNFLSYVVLSVAALPMLKQSN-GSIVVVSSQAGKMANPLV 645
            +    F D ++    R M VN+L  V  S A +  +K+   G IV VSSQAG++     
Sbjct: 231 MSLSGKFEDLEVSTFERLMSVNYLGSVYPSRAVITTMKERRVGRIVFVSSQAGQLGLFGF 290

Query: 646 APYSASKFALDGFFSSIRKEYSV 714
             YS+SKFA+ G   +++ E  +
Sbjct: 291 TAYSSSKFAIRGLAEALQMEVEI 313


  Database: RefSeq49_CP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,874,504
  Number of sequences in database:  33,336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 43,643,965
Number of extensions: 1212248
Number of successful extensions: 3795
Number of sequences better than 1.0e-05: 39
Number of HSP's gapped: 3755
Number of HSP's successfully gapped: 40
Length of query: 344
Length of database: 18,874,504
Length adjustment: 104
Effective length of query: 240
Effective length of database: 15,407,560
Effective search space: 3697814400
Effective search space used: 3697814400
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

Search to RefSeqHP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-002119
         (1033 letters)

Database: RefSeq49_HP.fasta 
           32,964 sequences; 18,297,164 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001193670.1| corticosteroid 11-beta-dehydrogenase isozyme...   478   e-135
Alignment   gi|NP_861420.1| corticosteroid 11-beta-dehydrogenase isozyme 1 ...   478   e-135
Alignment   gi|NP_005516.1| corticosteroid 11-beta-dehydrogenase isozyme 1 ...   478   e-135
Alignment   gi|NP_941995.1| hydroxysteroid 11-beta-dehydrogenase 1-like pro...   214   1e-55
Alignment   gi|NP_940935.1| hydroxysteroid 11-beta-dehydrogenase 1-like pro...   192   6e-49
Alignment   gi|NP_941996.1| hydroxysteroid 11-beta-dehydrogenase 1-like pro...   135   5e-32
Alignment   gi|NP_941994.1| hydroxysteroid 11-beta-dehydrogenase 1-like pro...   134   2e-31
Alignment   gi|NP_941997.1| hydroxysteroid 11-beta-dehydrogenase 1-like pro...   119   3e-27
Alignment   gi|NP_941993.1| hydroxysteroid 11-beta-dehydrogenase 1-like pro...    98   1e-20
Alignment   gi|NP_057113.1| dehydrogenase/reductase SDR family member 7 pre...    91   2e-18

>ref|NP_001193670.1| corticosteroid 11-beta-dehydrogenase isozyme 1 [Homo sapiens].
          Length = 292

 Score =  478 bits (1229), Expect = e-135
 Identities = 241/289 (83%), Positives = 271/289 (93%)
 Frame = +1

Query: 106 MAFMKKYLLPILGIFLAYYYYSANEEFRPEMLRGKKVIVTGASKGIGREMAYHLARMGAH 285
           MAFMKKYLLPILG+F+AYYYYSANEEFRPEML+GKKVIVTGASKGIGREMAYHLA+MGAH
Sbjct: 1   MAFMKKYLLPILGLFMAYYYYSANEEFRPEMLQGKKVIVTGASKGIGREMAYHLAKMGAH 60

Query: 286 VVVTARSEETLKKVVSHCLELGASSAHYVAGTMEDMTFAEQFVAKAGKLLGGLDMLILNH 465
           VVVTARS+ETL+KVVSHCLELGA+SAHY+AGTMEDMTFAEQFVA+AGKL+GGLDMLILNH
Sbjct: 61  VVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNH 120

Query: 466 ITHASMTPFSDDIHLVRRSMEVNFLSYVVLSVAALPMLKQSNGSIVVVSSQAGKMANPLV 645
           IT+ S+  F DDIH VR+SMEVNFLSYVVL+VAALPMLKQSNGSIVVVSS AGK+A P+V
Sbjct: 121 ITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMV 180

Query: 646 APYSASKFALDGFFSSIRKEYSVTKVNVSITLCILGLIDTDTAMTAVAGILNVQPSPKEE 825
           A YSASKFALDGFFSSIRKEYSV++VNVSITLC+LGLIDT+TAM AV+GI+++Q +PKEE
Sbjct: 181 AAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVSGIVHMQAAPKEE 240

Query: 826 CALEIIKGAALRQEEVYYDSSILTSLLLGNPGRKILEFLSLRHYNMEKF 972
           CALEIIKG ALRQEEVYYDSS+ T+LL+ NP RKILEFL    YNM++F
Sbjct: 241 CALEIIKGGALRQEEVYYDSSLWTTLLIRNPCRKILEFLYSTSYNMDRF 289


>ref|NP_861420.1| corticosteroid 11-beta-dehydrogenase isozyme 1 [Homo sapiens].
          Length = 292

 Score =  478 bits (1229), Expect = e-135
 Identities = 241/289 (83%), Positives = 271/289 (93%)
 Frame = +1

Query: 106 MAFMKKYLLPILGIFLAYYYYSANEEFRPEMLRGKKVIVTGASKGIGREMAYHLARMGAH 285
           MAFMKKYLLPILG+F+AYYYYSANEEFRPEML+GKKVIVTGASKGIGREMAYHLA+MGAH
Sbjct: 1   MAFMKKYLLPILGLFMAYYYYSANEEFRPEMLQGKKVIVTGASKGIGREMAYHLAKMGAH 60

Query: 286 VVVTARSEETLKKVVSHCLELGASSAHYVAGTMEDMTFAEQFVAKAGKLLGGLDMLILNH 465
           VVVTARS+ETL+KVVSHCLELGA+SAHY+AGTMEDMTFAEQFVA+AGKL+GGLDMLILNH
Sbjct: 61  VVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNH 120

Query: 466 ITHASMTPFSDDIHLVRRSMEVNFLSYVVLSVAALPMLKQSNGSIVVVSSQAGKMANPLV 645
           IT+ S+  F DDIH VR+SMEVNFLSYVVL+VAALPMLKQSNGSIVVVSS AGK+A P+V
Sbjct: 121 ITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMV 180

Query: 646 APYSASKFALDGFFSSIRKEYSVTKVNVSITLCILGLIDTDTAMTAVAGILNVQPSPKEE 825
           A YSASKFALDGFFSSIRKEYSV++VNVSITLC+LGLIDT+TAM AV+GI+++Q +PKEE
Sbjct: 181 AAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVSGIVHMQAAPKEE 240

Query: 826 CALEIIKGAALRQEEVYYDSSILTSLLLGNPGRKILEFLSLRHYNMEKF 972
           CALEIIKG ALRQEEVYYDSS+ T+LL+ NP RKILEFL    YNM++F
Sbjct: 241 CALEIIKGGALRQEEVYYDSSLWTTLLIRNPCRKILEFLYSTSYNMDRF 289


>ref|NP_005516.1| corticosteroid 11-beta-dehydrogenase isozyme 1 [Homo sapiens].
          Length = 292

 Score =  478 bits (1229), Expect = e-135
 Identities = 241/289 (83%), Positives = 271/289 (93%)
 Frame = +1

Query: 106 MAFMKKYLLPILGIFLAYYYYSANEEFRPEMLRGKKVIVTGASKGIGREMAYHLARMGAH 285
           MAFMKKYLLPILG+F+AYYYYSANEEFRPEML+GKKVIVTGASKGIGREMAYHLA+MGAH
Sbjct: 1   MAFMKKYLLPILGLFMAYYYYSANEEFRPEMLQGKKVIVTGASKGIGREMAYHLAKMGAH 60

Query: 286 VVVTARSEETLKKVVSHCLELGASSAHYVAGTMEDMTFAEQFVAKAGKLLGGLDMLILNH 465
           VVVTARS+ETL+KVVSHCLELGA+SAHY+AGTMEDMTFAEQFVA+AGKL+GGLDMLILNH
Sbjct: 61  VVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNH 120

Query: 466 ITHASMTPFSDDIHLVRRSMEVNFLSYVVLSVAALPMLKQSNGSIVVVSSQAGKMANPLV 645
           IT+ S+  F DDIH VR+SMEVNFLSYVVL+VAALPMLKQSNGSIVVVSS AGK+A P+V
Sbjct: 121 ITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMV 180

Query: 646 APYSASKFALDGFFSSIRKEYSVTKVNVSITLCILGLIDTDTAMTAVAGILNVQPSPKEE 825
           A YSASKFALDGFFSSIRKEYSV++VNVSITLC+LGLIDT+TAM AV+GI+++Q +PKEE
Sbjct: 181 AAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVSGIVHMQAAPKEE 240

Query: 826 CALEIIKGAALRQEEVYYDSSILTSLLLGNPGRKILEFLSLRHYNMEKF 972
           CALEIIKG ALRQEEVYYDSS+ T+LL+ NP RKILEFL    YNM++F
Sbjct: 241 CALEIIKGGALRQEEVYYDSSLWTTLLIRNPCRKILEFLYSTSYNMDRF 289


>ref|NP_941995.1| hydroxysteroid 11-beta-dehydrogenase 1-like protein isoform b [Homo
           sapiens].
          Length = 286

 Score =  214 bits (544), Expect = 1e-55
 Identities = 119/256 (46%), Positives = 161/256 (62%), Gaps = 1/256 (0%)
 Frame = +1

Query: 115 MKKYLLPILG-IFLAYYYYSANEEFRPEMLRGKKVIVTGASKGIGREMAYHLARMGAHVV 291
           MK  LL  LG +F AYY+   ++ F P  L+G +V++TGA+ G+G E+AYH AR+G+H+V
Sbjct: 1   MKVLLLTGLGALFFAYYW---DDNFDPASLQGARVLLTGANAGVGEELAYHYARLGSHLV 57

Query: 292 VTARSEETLKKVVSHCLELGASSAHYVAGTMEDMTFAEQFVAKAGKLLGGLDMLILNHIT 471
           +TA +E  L+KVV +C +LGA    Y+A  M      E  V  A   LGGLD L+LNHI 
Sbjct: 58  LTAHTEALLQKVVGNCRKLGAPKVFYIAADMASPEAPESVVQFALDKLGGLDYLVLNHIG 117

Query: 472 HASMTPFSDDIHLVRRSMEVNFLSYVVLSVAALPMLKQSNGSIVVVSSQAGKMANPLVAP 651
            A     +      R  M+VNF+SYV L+  ALP L  S GS+VVVSS  G++      P
Sbjct: 118 GAPAGTRARSPQATRWLMQVNFVSYVQLTSRALPSLTDSKGSLVVVSSLLGRVPTSFSTP 177

Query: 652 YSASKFALDGFFSSIRKEYSVTKVNVSITLCILGLIDTDTAMTAVAGILNVQPSPKEECA 831
           YSA+KFALDGFF S+R+E  V  VNV+IT+C+LGL D  +A  AV G+  V+ +P  + A
Sbjct: 178 YSAAKFALDGFFGSLRRELDVQDVNVAITMCVLGLRDRASAAEAVRGVTRVKAAPGPKAA 237

Query: 832 LEIIKGAALRQEEVYY 879
           L +I+G A R   V+Y
Sbjct: 238 LAVIRGGATRAAGVFY 253


>ref|NP_940935.1| hydroxysteroid 11-beta-dehydrogenase 1-like protein isoform e [Homo
           sapiens].
          Length = 315

 Score =  192 bits (487), Expect = 6e-49
 Identities = 108/225 (48%), Positives = 143/225 (63%), Gaps = 1/225 (0%)
 Frame = +1

Query: 115 MKKYLLPILG-IFLAYYYYSANEEFRPEMLRGKKVIVTGASKGIGREMAYHLARMGAHVV 291
           MK  LL  LG +F AYY+   ++ F P  L+G +V++TGA+ G+G E+AYH AR+G+H+V
Sbjct: 1   MKVLLLTGLGALFFAYYW---DDNFDPASLQGARVLLTGANAGVGEELAYHYARLGSHLV 57

Query: 292 VTARSEETLKKVVSHCLELGASSAHYVAGTMEDMTFAEQFVAKAGKLLGGLDMLILNHIT 471
           +TA +E  L+KVV +C +LGA    Y+A  M      E  V  A   LGGLD L+LNHI 
Sbjct: 58  LTAHTEALLQKVVGNCRKLGAPKVFYIAADMASPEAPESVVQFALDKLGGLDYLVLNHIG 117

Query: 472 HASMTPFSDDIHLVRRSMEVNFLSYVVLSVAALPMLKQSNGSIVVVSSQAGKMANPLVAP 651
            A     +      R  M+VNF+SYV L+  ALP L  S GS+VVVSS  G++      P
Sbjct: 118 GAPAGTRARSPQATRWLMQVNFVSYVQLTSRALPSLTDSKGSLVVVSSLLGRVPTSFSTP 177

Query: 652 YSASKFALDGFFSSIRKEYSVTKVNVSITLCILGLIDTDTAMTAV 786
           YSA+KFALDGFF S+R+E  V  VNV+IT+C+LGL D  +A  AV
Sbjct: 178 YSAAKFALDGFFGSLRRELDVQDVNVAITMCVLGLRDRASAAEAV 222


>ref|NP_941996.1| hydroxysteroid 11-beta-dehydrogenase 1-like protein isoform c [Homo
           sapiens].
          Length = 199

 Score =  135 bits (341), Expect = 5e-32
 Identities = 76/159 (47%), Positives = 98/159 (61%)
 Frame = +1

Query: 403 EQFVAKAGKLLGGLDMLILNHITHASMTPFSDDIHLVRRSMEVNFLSYVVLSVAALPMLK 582
           E  V  A   LGGLD L+LNHI  A     +      R  M+VNF+SYV L+  ALP L 
Sbjct: 8   ESVVQFALDKLGGLDYLVLNHIGGAPAGTRARSPQATRWLMQVNFVSYVQLTSRALPSLT 67

Query: 583 QSNGSIVVVSSQAGKMANPLVAPYSASKFALDGFFSSIRKEYSVTKVNVSITLCILGLID 762
            S GS+VVVSS  G++      PYSA+KFALDGFF S+R+E  V  VNV+IT+C+LGL D
Sbjct: 68  DSKGSLVVVSSLLGRVPTSFSTPYSAAKFALDGFFGSLRRELDVQDVNVAITMCVLGLRD 127

Query: 763 TDTAMTAVAGILNVQPSPKEECALEIIKGAALRQEEVYY 879
             +A  AV G+  V+ +P  + AL +I+G A R   V+Y
Sbjct: 128 RASAAEAVRGVTRVKAAPGPKAALAVIRGGATRAAGVFY 166


>ref|NP_941994.1| hydroxysteroid 11-beta-dehydrogenase 1-like protein isoform a [Homo
           sapiens].
          Length = 205

 Score =  134 bits (336), Expect = 2e-31
 Identities = 72/148 (48%), Positives = 94/148 (63%)
 Frame = +1

Query: 436 GGLDMLILNHITHASMTPFSDDIHLVRRSMEVNFLSYVVLSVAALPMLKQSNGSIVVVSS 615
           GGLD L+LNHI  A     +      R  M+VNF+SYV L+  ALP L  S GS+VVVSS
Sbjct: 25  GGLDYLVLNHIGGAPAGTRARSPQATRWLMQVNFVSYVQLTSRALPSLTDSKGSLVVVSS 84

Query: 616 QAGKMANPLVAPYSASKFALDGFFSSIRKEYSVTKVNVSITLCILGLIDTDTAMTAVAGI 795
             G++      PYSA+KFALDGFF S+R+E  V  VNV+IT+C+LGL D  +A  AV G+
Sbjct: 85  LLGRVPTSFSTPYSAAKFALDGFFGSLRRELDVQDVNVAITMCVLGLRDRASAAEAVRGV 144

Query: 796 LNVQPSPKEECALEIIKGAALRQEEVYY 879
             V+ +P  + AL +I+G A R   V+Y
Sbjct: 145 TRVKAAPGPKAALAVIRGGATRAAGVFY 172


>ref|NP_941997.1| hydroxysteroid 11-beta-dehydrogenase 1-like protein isoform d [Homo
           sapiens].
          Length = 152

 Score =  119 bits (299), Expect = 3e-27
 Identities = 61/119 (51%), Positives = 81/119 (68%)
 Frame = +1

Query: 523 MEVNFLSYVVLSVAALPMLKQSNGSIVVVSSQAGKMANPLVAPYSASKFALDGFFSSIRK 702
           M+VNF+SYV L+  ALP L  S GS+VVVSS  G++      PYSA+KFALDGFF S+R+
Sbjct: 1   MQVNFVSYVQLTSRALPSLTDSKGSLVVVSSLLGRVPTSFSTPYSAAKFALDGFFGSLRR 60

Query: 703 EYSVTKVNVSITLCILGLIDTDTAMTAVAGILNVQPSPKEECALEIIKGAALRQEEVYY 879
           E  V  VNV+IT+C+LGL D  +A  AV G+  V+ +P  + AL +I+G A R   V+Y
Sbjct: 61  ELDVQDVNVAITMCVLGLRDRASAAEAVRGVTRVKAAPGPKAALAVIRGGATRAAGVFY 119


>ref|NP_941993.1| hydroxysteroid 11-beta-dehydrogenase 1-like protein isoform f [Homo
           sapiens].
          Length = 181

 Score = 97.8 bits (242), Expect = 1e-20
 Identities = 50/88 (56%), Positives = 63/88 (71%)
 Frame = +1

Query: 523 MEVNFLSYVVLSVAALPMLKQSNGSIVVVSSQAGKMANPLVAPYSASKFALDGFFSSIRK 702
           M+VNF+SYV L+  ALP L  S GS+VVVSS  G++      PYSA+KFALDGFF S+R+
Sbjct: 1   MQVNFVSYVQLTSRALPSLTDSKGSLVVVSSLLGRVPTSFSTPYSAAKFALDGFFGSLRR 60

Query: 703 EYSVTKVNVSITLCILGLIDTDTAMTAV 786
           E  V  VNV+IT+C+LGL D  +A  AV
Sbjct: 61  ELDVQDVNVAITMCVLGLRDRASAAEAV 88


>ref|NP_057113.1| dehydrogenase/reductase SDR family member 7 precursor [Homo
           sapiens].
          Length = 339

 Score = 90.9 bits (224), Expect = 2e-18
 Identities = 67/207 (32%), Positives = 106/207 (51%), Gaps = 5/207 (2%)
 Frame = +1

Query: 187 RPEM-LRGKKVIVTGASKGIGREMAYHLARMGAHVVVTARSEETLKKVVSHCLELGASSA 363
           RPE  L    V VTGAS GIG E+AY L+++G  +V++AR    L++V   CLE G    
Sbjct: 43  RPEWELTDMVVWVTGASSGIGEELAYQLSKLGVSLVLSARRVHELERVKRRCLENGNLKE 102

Query: 364 HYVAGTMEDMTFAEQFVAKAGKLL---GGLDMLILNHITHASMTPFSDDIHLVRRSMEVN 534
             +     D+T      A    +L   G +D+L+ N             + + R+ +E+N
Sbjct: 103 KDILVLPLDLTDTGSHEAATKAVLQEFGRIDILVNNGGMSQRSLCMDTSLDVYRKLIELN 162

Query: 535 FLSYVVLSVAALP-MLKQSNGSIVVVSSQAGKMANPLVAPYSASKFALDGFFSSIRKEYS 711
           +L  V L+   LP M+++  G IV V+S  G ++ PL   Y ASK AL GFF+ +R E +
Sbjct: 163 YLGTVSLTKCVLPHMIERKQGKIVTVNSILGIISVPLSIGYCASKHALRGFFNGLRTELA 222

Query: 712 VTKVNVSITLCILGLIDTDTAMTAVAG 792
            T   + ++    G + ++    ++AG
Sbjct: 223 -TYPGIIVSNICPGPVQSNIVENSLAG 248


  Database: RefSeq49_HP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,297,164
  Number of sequences in database:  32,964
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 42,823,268
Number of extensions: 1191603
Number of successful extensions: 3865
Number of sequences better than 1.0e-05: 56
Number of HSP's gapped: 3814
Number of HSP's successfully gapped: 57
Length of query: 344
Length of database: 18,297,164
Length adjustment: 103
Effective length of query: 241
Effective length of database: 14,901,872
Effective search space: 3591351152
Effective search space used: 3591351152
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)

Search to RefSeqMP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-002119
         (1033 letters)

Database: RefSeq49_MP.fasta 
           30,036 sequences; 15,617,559 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001038216.1| corticosteroid 11-beta-dehydrogenase isozyme...   459   e-129
Alignment   gi|NP_032314.2| corticosteroid 11-beta-dehydrogenase isozyme 1 ...   459   e-129
Alignment   gi|NP_001165583.1| dehydrogenase/reductase SDR family member 7B...    87   2e-17
Alignment   gi|NP_663403.1| dehydrogenase/reductase SDR family member 7B is...    87   2e-17
Alignment   gi|NP_079798.2| dehydrogenase/reductase SDR family member 7 pre...    84   2e-16
Alignment   gi|NP_001156958.1| 17-beta-hydroxysteroid dehydrogenase 13 isof...    80   3e-15
Alignment   gi|NP_444492.1| estradiol 17-beta-dehydrogenase 11 [Mus musculu...    80   3e-15
Alignment   gi|NP_932147.2| 17-beta-hydroxysteroid dehydrogenase 13 isoform...    79   8e-15
Alignment   gi|NP_081810.1| 3-ketodihydrosphingosine reductase precursor [M...    77   2e-14
Alignment   gi|NP_032316.2| estradiol 17-beta-dehydrogenase 2 [Mus musculus].     75   6e-14

>ref|NP_001038216.1| corticosteroid 11-beta-dehydrogenase isozyme 1 [Mus musculus].
          Length = 292

 Score =  459 bits (1182), Expect = e-129
 Identities = 228/292 (78%), Positives = 257/292 (88%)
 Frame = +1

Query: 106 MAFMKKYLLPILGIFLAYYYYSANEEFRPEMLRGKKVIVTGASKGIGREMAYHLARMGAH 285
           MA MK YLLPIL +FLAYYYYS NEEFRPEML+GKKVIVTGASKGIGREMAYHL++MGAH
Sbjct: 1   MAVMKNYLLPILVLFLAYYYYSTNEEFRPEMLQGKKVIVTGASKGIGREMAYHLSKMGAH 60

Query: 286 VVVTARSEETLKKVVSHCLELGASSAHYVAGTMEDMTFAEQFVAKAGKLLGGLDMLILNH 465
           VV+TARSEE L+KVVS CLELGA+SAHY+AGTMEDMTFAEQF+ KAGKL+GGLDMLILNH
Sbjct: 61  VVLTARSEEGLQKVVSRCLELGAASAHYIAGTMEDMTFAEQFIVKAGKLMGGLDMLILNH 120

Query: 466 ITHASMTPFSDDIHLVRRSMEVNFLSYVVLSVAALPMLKQSNGSIVVVSSQAGKMANPLV 645
           IT  S++ F DDIH VRR MEVNFLSYVV+S AALPMLKQSNGSI V+SS AGKM  P++
Sbjct: 121 ITQTSLSLFHDDIHSVRRVMEVNFLSYVVMSTAALPMLKQSNGSIAVISSLAGKMTQPMI 180

Query: 646 APYSASKFALDGFFSSIRKEYSVTKVNVSITLCILGLIDTDTAMTAVAGILNVQPSPKEE 825
           APYSASKFALDGFFS+IR E  +TKVNVSITLC+LGLIDT+TAM  ++GI+N Q SPKEE
Sbjct: 181 APYSASKFALDGFFSTIRTELYITKVNVSITLCVLGLIDTETAMKEISGIINAQASPKEE 240

Query: 826 CALEIIKGAALRQEEVYYDSSILTSLLLGNPGRKILEFLSLRHYNMEKFTKH 981
           CALEIIKG ALR+ EVYYD S LT +LLGNPGRKI+EF SLR+YN + F  +
Sbjct: 241 CALEIIKGTALRKSEVYYDKSPLTPILLGNPGRKIMEFFSLRYYNKDMFVSN 292


>ref|NP_032314.2| corticosteroid 11-beta-dehydrogenase isozyme 1 [Mus musculus].
          Length = 292

 Score =  459 bits (1182), Expect = e-129
 Identities = 228/292 (78%), Positives = 257/292 (88%)
 Frame = +1

Query: 106 MAFMKKYLLPILGIFLAYYYYSANEEFRPEMLRGKKVIVTGASKGIGREMAYHLARMGAH 285
           MA MK YLLPIL +FLAYYYYS NEEFRPEML+GKKVIVTGASKGIGREMAYHL++MGAH
Sbjct: 1   MAVMKNYLLPILVLFLAYYYYSTNEEFRPEMLQGKKVIVTGASKGIGREMAYHLSKMGAH 60

Query: 286 VVVTARSEETLKKVVSHCLELGASSAHYVAGTMEDMTFAEQFVAKAGKLLGGLDMLILNH 465
           VV+TARSEE L+KVVS CLELGA+SAHY+AGTMEDMTFAEQF+ KAGKL+GGLDMLILNH
Sbjct: 61  VVLTARSEEGLQKVVSRCLELGAASAHYIAGTMEDMTFAEQFIVKAGKLMGGLDMLILNH 120

Query: 466 ITHASMTPFSDDIHLVRRSMEVNFLSYVVLSVAALPMLKQSNGSIVVVSSQAGKMANPLV 645
           IT  S++ F DDIH VRR MEVNFLSYVV+S AALPMLKQSNGSI V+SS AGKM  P++
Sbjct: 121 ITQTSLSLFHDDIHSVRRVMEVNFLSYVVMSTAALPMLKQSNGSIAVISSLAGKMTQPMI 180

Query: 646 APYSASKFALDGFFSSIRKEYSVTKVNVSITLCILGLIDTDTAMTAVAGILNVQPSPKEE 825
           APYSASKFALDGFFS+IR E  +TKVNVSITLC+LGLIDT+TAM  ++GI+N Q SPKEE
Sbjct: 181 APYSASKFALDGFFSTIRTELYITKVNVSITLCVLGLIDTETAMKEISGIINAQASPKEE 240

Query: 826 CALEIIKGAALRQEEVYYDSSILTSLLLGNPGRKILEFLSLRHYNMEKFTKH 981
           CALEIIKG ALR+ EVYYD S LT +LLGNPGRKI+EF SLR+YN + F  +
Sbjct: 241 CALEIIKGTALRKSEVYYDKSPLTPILLGNPGRKIMEFFSLRYYNKDMFVSN 292


>ref|NP_001165583.1| dehydrogenase/reductase SDR family member 7B isoform 1 [Mus
           musculus].
          Length = 314

 Score = 87.0 bits (214), Expect = 2e-17
 Identities = 63/200 (31%), Positives = 100/200 (50%), Gaps = 4/200 (2%)
 Frame = +1

Query: 199 LRGKKVIVTGASKGIGREMAYHLARMGAHVVVTARSEETLKKVVSHCLELGASSAHYVAG 378
           LR   V+VTGA+ G+GRE A      GA +V+  R+ + L+++            H    
Sbjct: 41  LRNAVVVVTGATSGLGRECAKVFHAAGAKLVLCGRNVKALEELSRELAGSSQGQTHQPFV 100

Query: 379 TMEDMTFAEQFVAKAGKLL---GGLDMLILNHITHASMTPFSDDIHLVRRSMEVNFLSYV 549
              D+       A A ++L   G +D+LI N       T     + + R+ ME+N+   V
Sbjct: 101 VTFDLADPGTIAAAAAEILQCFGYVDVLINNAGISYRGTISDTIVDVDRKVMEINYFGPV 160

Query: 550 VLSVAALP-MLKQSNGSIVVVSSQAGKMANPLVAPYSASKFALDGFFSSIRKEYSVTKVN 726
            L+ A LP M+++  G IV +SS  GK++ P  + YSASK A   FF  +R E  + + N
Sbjct: 161 ALTKALLPSMVERKQGHIVAISSIQGKISIPFRSAYSASKHATQAFFDCLRAE--MEEAN 218

Query: 727 VSITLCILGLIDTDTAMTAV 786
           + +T+   G I T+ ++ AV
Sbjct: 219 IKVTVISPGYIHTNLSVNAV 238


>ref|NP_663403.1| dehydrogenase/reductase SDR family member 7B isoform 2 [Mus
           musculus].
          Length = 323

 Score = 87.0 bits (214), Expect = 2e-17
 Identities = 63/200 (31%), Positives = 100/200 (50%), Gaps = 4/200 (2%)
 Frame = +1

Query: 199 LRGKKVIVTGASKGIGREMAYHLARMGAHVVVTARSEETLKKVVSHCLELGASSAHYVAG 378
           LR   V+VTGA+ G+GRE A      GA +V+  R+ + L+++            H    
Sbjct: 50  LRNAVVVVTGATSGLGRECAKVFHAAGAKLVLCGRNVKALEELSRELAGSSQGQTHQPFV 109

Query: 379 TMEDMTFAEQFVAKAGKLL---GGLDMLILNHITHASMTPFSDDIHLVRRSMEVNFLSYV 549
              D+       A A ++L   G +D+LI N       T     + + R+ ME+N+   V
Sbjct: 110 VTFDLADPGTIAAAAAEILQCFGYVDVLINNAGISYRGTISDTIVDVDRKVMEINYFGPV 169

Query: 550 VLSVAALP-MLKQSNGSIVVVSSQAGKMANPLVAPYSASKFALDGFFSSIRKEYSVTKVN 726
            L+ A LP M+++  G IV +SS  GK++ P  + YSASK A   FF  +R E  + + N
Sbjct: 170 ALTKALLPSMVERKQGHIVAISSIQGKISIPFRSAYSASKHATQAFFDCLRAE--MEEAN 227

Query: 727 VSITLCILGLIDTDTAMTAV 786
           + +T+   G I T+ ++ AV
Sbjct: 228 IKVTVISPGYIHTNLSVNAV 247


>ref|NP_079798.2| dehydrogenase/reductase SDR family member 7 precursor [Mus
           musculus].
          Length = 338

 Score = 84.0 bits (206), Expect = 2e-16
 Identities = 58/178 (32%), Positives = 93/178 (52%), Gaps = 5/178 (2%)
 Frame = +1

Query: 187 RPEM-LRGKKVIVTGASKGIGREMAYHLARMGAHVVVTARSEETLKKVVSHCLELGASSA 363
           RPE  L    V VTGAS GIG E+A+ L+++G  +V++AR  + L++V   CLE G    
Sbjct: 43  RPEWELTDMVVWVTGASSGIGEELAFQLSKLGVSLVLSARRAQELERVKRRCLENGNLKE 102

Query: 364 HYVAGTMEDMTFAEQFVAKAGKLL---GGLDMLILNHITHASMTPFSDDIHLVRRSMEVN 534
             +     D+T      A    +L   G +D+L+ N            ++ + +  + +N
Sbjct: 103 KDILVLPLDLTDTSSHEAATKAVLQEFGKIDILVNNGGRSQRSLVLETNLDVFKELINLN 162

Query: 535 FLSYVVLSVAALP-MLKQSNGSIVVVSSQAGKMANPLVAPYSASKFALDGFFSSIRKE 705
           ++  V L+   LP M+++  G IV V+S AG  +  L + Y ASK AL GFF+++  E
Sbjct: 163 YIGTVSLTKCVLPHMIERKQGKIVTVNSIAGIASVSLSSGYCASKHALRGFFNALHSE 220


>ref|NP_001156958.1| 17-beta-hydroxysteroid dehydrogenase 13 isoform 1 [Mus musculus].
          Length = 300

 Score = 79.7 bits (195), Expect = 3e-15
 Identities = 75/300 (25%), Positives = 136/300 (45%), Gaps = 8/300 (2%)
 Frame = +1

Query: 106 MAFMKKYLLPILGIFLAYYYYSANEEFRP---EMLRGKKVIVTGASKGIGREMAYHLARM 276
           M  + ++LL ++G+ +  Y  S  + F P   + + G+ V++TGA  GIGR  AY  A+ 
Sbjct: 1   MNLILEFLL-LVGVIIYSYLESLVKFFIPRRRKSVTGQTVLITGAGHGIGRLTAYEFAKQ 59

Query: 277 GAHVVVTARSEETLKKVVSHCLELGASSAHYVAGTMEDMTFAEQFVAKAGKLLGGLDMLI 456
            + +V+   ++  +++    C +LGA   H       +       V +  + +G +++++
Sbjct: 60  KSRLVLWDINKRGVEETADKCRKLGA-VVHVFVVDCSNRAEIYNSVDQVKREVGDVEIVV 118

Query: 457 LN--HITHASMTPFSDDIHLVRRSMEVNFLSYVVLSVAALP-MLKQSNGSIVVVSSQAGK 627
            N   I  A +    D+   + ++ EVN L +  +  A LP ML++++G IV V+S  G 
Sbjct: 119 NNAGAIYPADLLSAKDE--EITKTFEVNILGHFWIIKALLPSMLRRNSGHIVTVASVCGH 176

Query: 628 MANPLVAPYSASKFALDGFFSSIRKEYSVTKVNVSITLCILGLIDTDTAMTAVAGILNVQ 807
              P + PY +SKFA  GF  ++  E          T C+  +   +T  T         
Sbjct: 177 GVIPYLIPYCSSKFAAVGFHRALTAELDTLGKTGIQTSCLCPVF-VNTGFTKNPSTRLWP 235

Query: 808 PSPKEECALEIIKGAALRQEEVYYDSSILTSLLLGN--PGRKILEFLSLRHYNMEKFTKH 981
               EE A  +I G    ++ ++  S I  SL+L    P R +     +++   E    H
Sbjct: 236 VLEPEEVARSLINGILTNKKMIFVPSYINISLILEKFLPERALKAISRIQNIQFEAIVGH 295


>ref|NP_444492.1| estradiol 17-beta-dehydrogenase 11 [Mus musculus].
          Length = 298

 Score = 79.7 bits (195), Expect = 3e-15
 Identities = 68/261 (26%), Positives = 124/261 (47%), Gaps = 6/261 (2%)
 Frame = +1

Query: 127 LLPILGIFLAYYYYSANEEFRPEMLRGKKVIVTGASKGIGREMAYHLARMGAHVVVTARS 306
           LLP+L +F            + + + G+ V++TGA  GIGR  AY  A++   +V+   +
Sbjct: 10  LLPLLIVFSIESLVKLFIPKKKKSVAGEIVLITGAGHGIGRLTAYEFAKLNTKLVLWDIN 69

Query: 307 EETLKKVVSHCLELGASSAHYVAGTMEDMTFAEQFVAKAGKL---LGGLDMLILNHITHA 477
           +  +++  + C +LGA +  +V     D +  E+  + A K+   +G + +L+ N     
Sbjct: 70  KNGIEETAAKCRKLGAQAHPFVV----DCSQREEIYSAAKKVKEEVGDVSILVNNAGVVY 125

Query: 478 SMTPFSDDIHLVRRSMEVNFLSYVVLSVAALP-MLKQSNGSIVVVSSQAGKMANPLVAPY 654
           +   F+     + ++ EVN L++   + A LP M+K ++G IV V+S AG    P +  Y
Sbjct: 126 TADLFATQDPQIEKTFEVNVLAHFWTTKAFLPVMMKNNHGHIVTVASAAGHTVVPFLLAY 185

Query: 655 SASKFALDGFFSSIRKEYSVTKVNVSITLCIL-GLIDTDTAMTAVAGILNVQPS-PKEEC 828
            +SKFA  GF  ++  E +        T C+    I+T           N+ P+   EE 
Sbjct: 186 CSSKFAAVGFHRALTDELAALGRTGVRTSCLCPNFINTGFIKNPST---NLGPTLEPEEV 242

Query: 829 ALEIIKGAALRQEEVYYDSSI 891
              ++ G    ++ ++  SSI
Sbjct: 243 VEHLMHGILTEKQMIFVPSSI 263


>ref|NP_932147.2| 17-beta-hydroxysteroid dehydrogenase 13 isoform 2 [Mus musculus].
          Length = 304

 Score = 78.6 bits (192), Expect = 8e-15
 Identities = 71/274 (25%), Positives = 128/274 (46%), Gaps = 6/274 (2%)
 Frame = +1

Query: 106 MAFMKKYLLPILGIFLAYYYYSANEEFRP---EMLRGKKVIVTGASKGIGREMAYHLARM 276
           M  + ++LL ++G+ +  Y  S  + F P   + + G+ V++TGA  GIGR  AY  A+ 
Sbjct: 1   MNLILEFLL-LVGVIIYSYLESLVKFFIPRRRKSVTGQTVLITGAGHGIGRLTAYEFAKQ 59

Query: 277 GAHVVVTARSEETLKKVVSHCLELGASSAHYVAGTMEDMTFAEQFVAKAGKLLGGLDMLI 456
            + +V+   ++  +++    C +LGA   H       +       V +  + +G +++++
Sbjct: 60  KSRLVLWDINKRGVEETADKCRKLGA-VVHVFVVDCSNRAEIYNSVDQVKREVGDVEIVV 118

Query: 457 LN--HITHASMTPFSDDIHLVRRSMEVNFLSYVVLSVAALP-MLKQSNGSIVVVSSQAGK 627
            N   I  A +    D+   + ++ EVN L +  +  A LP ML++++G IV V+S  G 
Sbjct: 119 NNAGAIYPADLLSAKDE--EITKTFEVNILGHFWIIKALLPSMLRRNSGHIVTVASVCGH 176

Query: 628 MANPLVAPYSASKFALDGFFSSIRKEYSVTKVNVSITLCILGLIDTDTAMTAVAGILNVQ 807
              P + PY +SKFA  GF  ++  E          T C+  +   +T  T         
Sbjct: 177 GVIPYLIPYCSSKFAAVGFHRALTAELDTLGKTGIQTSCLCPVF-VNTGFTKNPSTRLWP 235

Query: 808 PSPKEECALEIIKGAALRQEEVYYDSSILTSLLL 909
               EE A  +I G    ++ ++  S I  SL+L
Sbjct: 236 VLEPEEVARSLINGILTNKKMIFVPSYINISLIL 269


>ref|NP_081810.1| 3-ketodihydrosphingosine reductase precursor [Mus musculus].
          Length = 332

 Score = 77.0 bits (188), Expect = 2e-14
 Identities = 65/217 (29%), Positives = 101/217 (46%), Gaps = 5/217 (2%)
 Frame = +1

Query: 136 ILGIFLAYYYYSANEEFRPEMLRGKKVIVTGASKGIGREMAYHLARMGAHVVVTARSEET 315
           ++   L  Y  S     +P  L G  V+VTG S GIG+ +A    + GA + + AR+E+ 
Sbjct: 9   LVAFVLLLYMVSPLISPKPLALPGAHVVVTGGSSGIGKCIAIECYKQGAFITLVARNEDK 68

Query: 316 L----KKVVSHCLELGASSAHYVAGTMEDMTFAEQFVAKAGKLLGGLDMLILNHITHASM 483
           L    K +  H +              +D    E  + +A + LG +DML+    T  S 
Sbjct: 69  LLQAKKDIEKHSINDKQVVLCISVDVSQDYNQVENVIKQAQEKLGPVDMLVNCAGTSMSG 128

Query: 484 TPFSDDIHLVRRSMEVNFLSYVVLSVAALPMLKQSN-GSIVVVSSQAGKMANPLVAPYSA 660
                ++    + M +N+L  V  S A +  +K+   G IV VSSQAG++       YS+
Sbjct: 129 KFEELEVSSFEKLMSINYLGSVYPSRAVITTMKERRVGRIVFVSSQAGQLGLFGFTAYSS 188

Query: 661 SKFALDGFFSSIRKEYSVTKVNVSITLCILGLIDTDT 771
           SKFA+ G   +++ E  V   NV +T+      DTDT
Sbjct: 189 SKFAIRGLAEALQME--VKPYNVYVTVAYPP--DTDT 221


>ref|NP_032316.2| estradiol 17-beta-dehydrogenase 2 [Mus musculus].
          Length = 381

 Score = 75.5 bits (184), Expect = 6e-14
 Identities = 69/232 (29%), Positives = 111/232 (47%), Gaps = 10/232 (4%)
 Frame = +1

Query: 64  SVCPTGLLGPGPCLMAFMKKYLLPILGI--FLAYYYYSANEEFRPEMLRGKKVIVTGASK 237
           +VC  GL G G CL++      L +L +  FL  Y  S++++  P  +  K V+VTGA  
Sbjct: 37  AVCLAGLWG-GACLLSLSLLCTLFLLSVACFLLLYMSSSDQDLLP--VDQKAVLVTGADS 93

Query: 238 GIGREMAYHLARMGAHVVVTARSEET--LKKVVSHCLELGASSAHYVAGTMEDMTFAEQF 411
           G G  +A HL ++G  V      +E    +++  HC E        ++    D+T  EQ 
Sbjct: 94  GFGHGLAKHLDKLGFTVFAGVLDKEGPGAEELRKHCSER-------LSVLQMDVTKPEQI 146

Query: 412 VAKAGKLLG-----GLDMLILNH-ITHASMTPFSDDIHLVRRSMEVNFLSYVVLSVAALP 573
                K+       GL  ++ N  + H  +      + + R+ M VNF   V ++ A LP
Sbjct: 147 KDAHSKVTEKIQDKGLWAVVNNAGVFHLPIDGELIPMSIYRKCMAVNFFGTVEVTKAFLP 206

Query: 574 MLKQSNGSIVVVSSQAGKMANPLVAPYSASKFALDGFFSSIRKEYSVTKVNV 729
           +L++S G +V VSS  G +   + + Y+A+K AL  F + IR+E     V V
Sbjct: 207 LLRKSKGRLVNVSSMGGTVPLQMTSAYAATKAALTMFSTIIRQELDKWGVKV 258


  Database: RefSeq49_MP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 15,617,559
  Number of sequences in database:  30,036
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 36,319,319
Number of extensions: 999800
Number of successful extensions: 3214
Number of sequences better than 1.0e-05: 48
Number of HSP's gapped: 3169
Number of HSP's successfully gapped: 48
Length of query: 344
Length of database: 15,617,559
Length adjustment: 102
Effective length of query: 242
Effective length of database: 12,553,887
Effective search space: 3038040654
Effective search space used: 3038040654
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)

Search to RefSeqSP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-002119
         (1033 letters)

Database: RefSeq49_SP.fasta 
           24,897 sequences; 11,343,932 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_999413.1| corticosteroid 11-beta-dehydrogenase isozyme 1 ...   539   e-153
Alignment   gi|XP_003123133.1| PREDICTED: hydroxysteroid 11-beta-dehydrogen...   211   4e-55
Alignment   gi|XP_001928783.1| PREDICTED: dehydrogenase/reductase SDR famil...    89   4e-18
Alignment   gi|NP_999184.1| dehydrogenase/reductase SDR family member 4 [Su...    81   8e-16
Alignment   gi|NP_001161121.1| estradiol 17-beta-dehydrogenase 2 [Sus scrof...    81   1e-15
Alignment   gi|XP_001925948.1| PREDICTED: 3-ketodihydrosphingosine reductas...    80   1e-15
Alignment   gi|XP_003129386.2| PREDICTED: estradiol 17-beta-dehydrogenase 1...    80   2e-15
Alignment   gi|NP_001230551.1| hydroxysteroid (17-beta) dehydrogenase 13 [S...    80   2e-15
Alignment   gi|NP_001182297.1| epidermal retinol dehydrogenase 2 [Sus scrof...    74   2e-13
Alignment   gi|XP_003132036.2| PREDICTED: dehydrogenase/reductase SDR famil...    70   1e-12

>ref|NP_999413.1| corticosteroid 11-beta-dehydrogenase isozyme 1 [Sus scrofa].
          Length = 292

 Score =  539 bits (1388), Expect = e-153
 Identities = 281/292 (96%), Positives = 283/292 (96%)
 Frame = +1

Query: 106 MAFMKKYLLPILGIFLAYYYYSANEEFRPEMLRGKKVIVTGASKGIGREMAYHLARMGAH 285
           MAFMKKYLLPILGIFLAYYYYSANEEFRPEMLRGKKVIVTGASKGIGREMAYHLARMGAH
Sbjct: 1   MAFMKKYLLPILGIFLAYYYYSANEEFRPEMLRGKKVIVTGASKGIGREMAYHLARMGAH 60

Query: 286 VVVTARSEETLKKVVSHCLELGASSAHYVAGTMEDMTFAEQFVAKAGKLLGGLDMLILNH 465
           VVVTARSEETLKKVVSH LELGASSAHYVAGTMEDMTFAEQFVAKAGKLLGGLDMLILNH
Sbjct: 61  VVVTARSEETLKKVVSHSLELGASSAHYVAGTMEDMTFAEQFVAKAGKLLGGLDMLILNH 120

Query: 466 ITHASMTPFSDDIHLVRRSMEVNFLSYVVLSVAALPMLKQSNGSIVVVSSQAGKMANPLV 645
           IT A MT   DDIHLVRRSMEVNFLSYVVLSVAALPMLKQSNGSIVVVSSQAGKMANPLV
Sbjct: 121 ITQAFMTSVYDDIHLVRRSMEVNFLSYVVLSVAALPMLKQSNGSIVVVSSQAGKMANPLV 180

Query: 646 APYSASKFALDGFFSSIRKEYSVTKVNVSITLCILGLIDTDTAMTAVAGILNVQPSPKEE 825
           APYSASKFALDGFFSSI KEYSVTKVNVSITLCILGLIDTDTAMTAVAGILNVQPSPKEE
Sbjct: 181 APYSASKFALDGFFSSITKEYSVTKVNVSITLCILGLIDTDTAMTAVAGILNVQPSPKEE 240

Query: 826 CALEIIKGAALRQEEVYYDSSILTSLLLGNPGRKILEFLSLRHYNMEKFTKH 981
           CALEIIKGAALRQEEVYYDSSILTSLLL NPGRKILEFLSLRHYNME+FT +
Sbjct: 241 CALEIIKGAALRQEEVYYDSSILTSLLLENPGRKILEFLSLRHYNMERFTNN 292


>ref|XP_003123133.1| PREDICTED: hydroxysteroid 11-beta-dehydrogenase 1-like protein-like
           [Sus scrofa].
          Length = 293

 Score =  211 bits (538), Expect = 4e-55
 Identities = 115/256 (44%), Positives = 161/256 (62%), Gaps = 1/256 (0%)
 Frame = +1

Query: 115 MKKYLLPILG-IFLAYYYYSANEEFRPEMLRGKKVIVTGASKGIGREMAYHLARMGAHVV 291
           MK  LL  LG +F AYY+    + F P  LRG +V++TGAS G+G E+AYH AR+G+H+V
Sbjct: 7   MKVLLLTGLGALFFAYYW---GDNFDPASLRGARVLLTGASAGVGEELAYHYARLGSHLV 63

Query: 292 VTARSEETLKKVVSHCLELGASSAHYVAGTMEDMTFAEQFVAKAGKLLGGLDMLILNHIT 471
           +TA +E  L+KVV +C +LGA    Y+A  M      E+ V  A   LGGLD L+LNH+ 
Sbjct: 64  LTAHTEALLQKVVGNCRKLGAPKVFYIAADMASPDVPERVVQFALDKLGGLDYLVLNHLG 123

Query: 472 HASMTPFSDDIHLVRRSMEVNFLSYVVLSVAALPMLKQSNGSIVVVSSQAGKMANPLVAP 651
            A     +     +R  ++VNF+SYV L+  ALP L  S GS+VVVSS  G++     +P
Sbjct: 124 AAPAGTRARSAQAIRWLLQVNFISYVQLTSLALPSLTDSKGSLVVVSSLLGRVPTSFSSP 183

Query: 652 YSASKFALDGFFSSIRKEYSVTKVNVSITLCILGLIDTDTAMTAVAGILNVQPSPKEECA 831
           YSA+KFALD FF S+R+E  +  VNV+IT+C+LGL D  +A   V G+   + +P  + A
Sbjct: 184 YSAAKFALDSFFDSLRRELDMQDVNVAITMCVLGLRDHASAAEGVRGVTRAKAAPGPKAA 243

Query: 832 LEIIKGAALRQEEVYY 879
           L +I+G+A R   V+Y
Sbjct: 244 LAVIRGSATRASGVFY 259


>ref|XP_001928783.1| PREDICTED: dehydrogenase/reductase SDR family member 7 [Sus
           scrofa].
          Length = 339

 Score = 89.0 bits (219), Expect = 4e-18
 Identities = 61/178 (34%), Positives = 91/178 (51%), Gaps = 5/178 (2%)
 Frame = +1

Query: 187 RPEM-LRGKKVIVTGASKGIGREMAYHLARMGAHVVVTARSEETLKKVVSHCLELGASSA 363
           RPE  L    V VTGAS GIG E+ Y L+++G  +V++AR  + L++V   CLE G    
Sbjct: 43  RPEWELTDMVVWVTGASSGIGEELVYQLSKLGVSLVLSARRVQELERVKRRCLENGILKG 102

Query: 364 HYVAGTMEDMTFAEQFVAKAGKLL---GGLDMLILNHITHASMTPFSDDIHLVRRSMEVN 534
             +     D+            +L   G +D+L+ N             + + +  MEVN
Sbjct: 103 KDILILPLDLANRSSHEVATKAVLQEFGKIDILVNNGGVSQRSLCVDTSLDVYKELMEVN 162

Query: 535 FLSYVVLSVAALP-MLKQSNGSIVVVSSQAGKMANPLVAPYSASKFALDGFFSSIRKE 705
           +L  V L+   LP M+++  G I+ V+S  G +A PL   Y ASK AL GFF+++R E
Sbjct: 163 YLGTVSLTKCVLPHMIEKKQGKIITVNSFMGIIAAPLSGGYCASKHALRGFFNTLRTE 220


>ref|NP_999184.1| dehydrogenase/reductase SDR family member 4 [Sus scrofa].
          Length = 260

 Score = 81.3 bits (199), Expect = 8e-16
 Identities = 66/202 (32%), Positives = 105/202 (51%), Gaps = 8/202 (3%)
 Frame = +1

Query: 187 RPEMLRGKKVIVTGASKGIGREMAYHLARMGAHVVVTARSEETLKKVVSHCLELGASSAH 366
           R + L  K  +VT ++ GIG  +A  LA+ GAHVVV++R +E + + V+     G S   
Sbjct: 8   RRKPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTG 67

Query: 367 YV--AGTMEDMTFAEQFVAKAGKLLGGLDMLILNHITHASMTPFSDDI-----HLVRRSM 525
            V   G  ED    E+ VA A  L GG+D+L+ N    A++ PF  +I      +  + +
Sbjct: 68  TVCHVGKAED---RERLVAMAVNLHGGVDILVSN----AAVNPFFGNIIDATEEVWDKIL 120

Query: 526 EVNFLSYVVLSVAALP-MLKQSNGSIVVVSSQAGKMANPLVAPYSASKFALDGFFSSIRK 702
            VN  + V+++ A +P M K+  GS+++VSS       P + PY+ SK AL G   ++  
Sbjct: 121 HVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTKNLAV 180

Query: 703 EYSVTKVNVSITLCILGLIDTD 768
           E  +   N+ +     GLI T+
Sbjct: 181 E--LAPRNIRVNCLAPGLIKTN 200


>ref|NP_001161121.1| estradiol 17-beta-dehydrogenase 2 [Sus scrofa].
          Length = 388

 Score = 80.9 bits (198), Expect = 1e-15
 Identities = 72/231 (31%), Positives = 117/231 (50%), Gaps = 8/231 (3%)
 Frame = +1

Query: 67  VCPTGLLGPGPCLMAFMKKY--LLPILGIFLAYYYYSANEEFRPEMLRGKKVIVTGASKG 240
           VC  GL G G CL++    +  +L  L  FL Y Y+S  +EF P  +  K V++TG   G
Sbjct: 39  VCLAGLWG-GACLLSLSLFWGLILFSLSCFLMYAYFSG-QEFLP--VDQKAVLITGGDSG 94

Query: 241 IGREMAYHLARMGAHVVVTARSEETLKKVVSHCLELGASSAHYVAGTMEDMTFAEQFVAK 420
           IG  ++ +L ++G  V      E+      S   EL  + + +++    D+T ++Q    
Sbjct: 95  IGHALSKYLDKLGFIVFAGVLDEKG-----SGAEELRRTCSKHLSVLQLDITNSQQIRDA 149

Query: 421 AGKLLGGLDMLIL-NHITHASMTPFSDDIHLV-----RRSMEVNFLSYVVLSVAALPMLK 582
             K++  +    L   + +A +  F  D  L+     +R M VNF   V ++ A LP+L+
Sbjct: 150 HSKVMEKVQNRGLWAVVNNAGILGFPIDGELIPMTQYKRCMAVNFFGAVEVTKAFLPLLR 209

Query: 583 QSNGSIVVVSSQAGKMANPLVAPYSASKFALDGFFSSIRKEYSVTKVNVSI 735
           +S G +V +SS AG +    +A YS++K AL  F + +RKE S   V VS+
Sbjct: 210 KSKGRLVNISSMAGGVPMEKMAAYSSTKAALTMFSAVMRKELSKWGVKVSV 260


>ref|XP_001925948.1| PREDICTED: 3-ketodihydrosphingosine reductase-like [Sus scrofa].
          Length = 332

 Score = 80.5 bits (197), Expect = 1e-15
 Identities = 68/218 (31%), Positives = 105/218 (48%), Gaps = 6/218 (2%)
 Frame = +1

Query: 136 ILGIFLAYYYYSANEEFRPEMLRGKKVIVTGASKGIGREMAYHLARMGAHVVVTARSEET 315
           ++   L  Y  S     +P  L G  V+VTG S GIG+ +A    + GA + + AR+E+ 
Sbjct: 9   LVAFVLLLYMVSPLISPKPLALPGAHVVVTGGSSGIGKCIAIECYKQGAFITLVARNEDK 68

Query: 316 L----KKVVSHCLELGASSAHYVAGTMEDMTFAEQFVAKAGKLLGGLDMLILNHITHASM 483
           L    K++  H +              +D +  E  + +A + LG +DML+ N    +  
Sbjct: 69  LLQAKKEIEKHSINDKQVVLCISVDVSQDYSQVENVIKQAQEKLGPVDMLV-NCAGMSLS 127

Query: 484 TPFSD-DIHLVRRSMEVNFLSYVVLSVAALPMLKQSN-GSIVVVSSQAGKMANPLVAPYS 657
             F D ++    R M VN+L  V  S A +  +K+   G IV VSSQAG++       YS
Sbjct: 128 GKFEDLEVSTFERLMSVNYLGSVYPSRAVITTMKERRVGRIVFVSSQAGQLGLFGFTAYS 187

Query: 658 ASKFALDGFFSSIRKEYSVTKVNVSITLCILGLIDTDT 771
           +SKFA+ G   +++ E  V   NV +T+      DTDT
Sbjct: 188 SSKFAIRGLAEALQME--VKPYNVYVTVAYPP--DTDT 221


>ref|XP_003129386.2| PREDICTED: estradiol 17-beta-dehydrogenase 11-like [Sus scrofa].
          Length = 313

 Score = 79.7 bits (195), Expect = 2e-15
 Identities = 58/211 (27%), Positives = 104/211 (49%), Gaps = 4/211 (1%)
 Frame = +1

Query: 127 LLPILGIFLAYYYYSANEEFRPEMLRGKKVIVTGASKGIGREMAYHLARMGAHVVVTARS 306
           LLP+L IF            + + + G+ V++TGA  G+GR  A+  A++   +V+   +
Sbjct: 10  LLPLLLIFTLESLLKLFIPKKRKSVTGEIVLITGAGHGLGRLTAFEFAKLKCKLVLWDIN 69

Query: 307 EETLKKVVSHCLELGASSAHYVAGTMEDMTFAEQFVAKAGKL---LGGLDMLILNHITHA 477
           +  L++    C  LG+ +  +V     D +  E   + A K+   +G + +L+ N     
Sbjct: 70  KHGLEETADECKRLGSKAHAFVV----DCSDREDIYSSAKKVKAEVGDVSILVNNAGVVY 125

Query: 478 SMTPFSDDIHLVRRSMEVNFLSYVVLSVAALP-MLKQSNGSIVVVSSQAGKMANPLVAPY 654
           +   F+     + ++ EVN L++   + A LP M+K ++G IV V+S AG    P +  Y
Sbjct: 126 TSDLFATQDPQIEKTFEVNILAHFWTTKAFLPAMMKNNHGHIVTVASAAGHAGIPFLLAY 185

Query: 655 SASKFALDGFFSSIRKEYSVTKVNVSITLCI 747
            +SKFA  GF  ++ +E +  K     T C+
Sbjct: 186 CSSKFAAVGFHKALTEELAALKRTGVKTTCL 216


>ref|NP_001230551.1| hydroxysteroid (17-beta) dehydrogenase 13 [Sus scrofa].
          Length = 300

 Score = 79.7 bits (195), Expect = 2e-15
 Identities = 75/294 (25%), Positives = 134/294 (45%), Gaps = 9/294 (3%)
 Frame = +1

Query: 127 LLPILGIFLAYYYYSANEEFRP---EMLRGKKVIVTGASKGIGREMAYHLARMGAHVVVT 297
           LL +L I +  Y  S  + F P   + + G+ V+VTGA  GIGR++AY  A+  + +V+ 
Sbjct: 7   LLFLLIIIIYSYLESLVKVFIPRRRKSVAGEIVLVTGAGHGIGRKIAYEFAKRKSRLVLW 66

Query: 298 ARSEETLKKVVSHCLELGASSAHYVAGTMEDMTFAEQF---VAKAGKLLGGLDMLILNHI 468
             ++  L++  + C +LGA++  +V     D +  E+    V +  K +G + +++ N  
Sbjct: 67  DINKHGLEETAAECKKLGATTHAFVV----DCSNREEIYNSVNQVKKEVGDITIVVNNAG 122

Query: 469 THASMTPFSDDIHLVRRSMEVNFLSYVVLSVAALP-MLKQSNGSIVVVSSQAGKMANPLV 645
           T       S     +  + EVN L +  ++ A LP M+ +++G +V V+S  G    P +
Sbjct: 123 TIYPADLLSTKDEEITITFEVNILGHFWITKALLPAMMSRNHGHVVTVASLCGHGVIPYL 182

Query: 646 APYSASKFALDGFFSSIRKEYSVTKVNVSITLCILGLIDTDTAMTAVAGILNVQPSPKEE 825
            PY +SKFA  GF  ++  E          T C+  +   +T  T             +E
Sbjct: 183 IPYCSSKFAAVGFHRALTAELEAVGKTGIKTSCLCPVF-VNTGFTKNPSTRLWPILETDE 241

Query: 826 CALEIIKGAALRQEEVYYDSSILTSLLLGN--PGRKILEFLSLRHYNMEKFTKH 981
            A  +I G    ++ ++  S +  SL L    P R +     +++   E    H
Sbjct: 242 VARSLIDGILTNKKMIFVPSYLNISLTLERFLPERALAAINRVQNIQFEAVVGH 295


>ref|NP_001182297.1| epidermal retinol dehydrogenase 2 [Sus scrofa].
          Length = 309

 Score = 73.6 bits (179), Expect = 2e-13
 Identities = 72/274 (26%), Positives = 130/274 (47%), Gaps = 8/274 (2%)
 Frame = +1

Query: 82  LLGPGPCLMAFMKKYLLPILGIFLAYYYYSANEEFRPEMLRGKKVIVTGASKGIGREMAY 261
           +LG    L+ F+ K +L ++   +  +     ++     + G+ V++TGA  G+GR +A 
Sbjct: 4   ILGLAQELLVFLGKSILVVVESLVFTFIPVPRKK-----VAGEIVLITGAGSGLGRLLAL 58

Query: 262 HLARMGAHVVV----TARSEETLKKVVSHCLELGASSAHYVAGTMEDMTFAEQFVAKAGK 429
             AR+G+ +V+      R+EET K V     E G + A+             +  ++  K
Sbjct: 59  KFARLGSVLVLWDINQERNEETRKMV----QEAGVAGAYAYTCDCSQREDVYRVASQVKK 114

Query: 430 LLGGLDMLILNH--ITHASMTPFSDDIHLVRRSMEVNFLSYVVLSVAALP-MLKQSNGSI 600
            +G + +LI N   +T        D+  L+ +S++VNF +++    A LP M+   +G +
Sbjct: 115 EVGDVSILINNAGIVTGRKFLDCPDE--LMEKSLDVNFKAHLWTYKAFLPAMIANDHGHL 172

Query: 601 VVVSSQAGKMANPLVAPYSASKFALDGFFSSIRKE-YSVTKVNVSITLCILGLIDTDTAM 777
           V +SS AG +    +A Y ASKFA  GF  ++  E ++  +  +  T+     I T    
Sbjct: 173 VCISSSAGLIGVYGLADYCASKFAAFGFAETVFFETFASKQKGIKTTIVCPFFIKTQMFE 232

Query: 778 TAVAGILNVQPSPKEECALEIIKGAALRQEEVYY 879
              + +  V P  + E A+E I  A L+++   Y
Sbjct: 233 GCTSRLSYVLPILEPEYAVEKIVDAILKEQLYLY 266


>ref|XP_003132036.2| PREDICTED: dehydrogenase/reductase SDR family member 7C-like [Sus
           scrofa].
          Length = 311

 Score = 70.5 bits (171), Expect = 1e-12
 Identities = 54/207 (26%), Positives = 96/207 (46%), Gaps = 6/207 (2%)
 Frame = +1

Query: 130 LPILGIF-LAYYYYSANEEFRPEMLRGKKVIVTGASKGIGREMAYHLARMGAHVVVTARS 306
           L +LGI  L + Y   +  +    ++ K V++T A  G+G+E A      GA +V+  ++
Sbjct: 11  LLLLGISGLLFIYQEVSRLWSKSAVQNKVVVITDAISGLGKECARVFHTGGARLVLCGKN 70

Query: 307 EETLKKVVSHCLELGASSAHY----VAGTMEDMTFAEQFVAKAGKLLGGLDMLILNHITH 474
            E L+ +    + +   S  +    V   + D++  +    +     G +D+LI N    
Sbjct: 71  WERLQTLYDALISVADPSKTFTPKLVLLDLSDISCVQDVAKEVLDCYGCVDILISNASMK 130

Query: 475 ASMTPFSDDIHLVRRSMEVNFLSYVVLSVAALP-MLKQSNGSIVVVSSQAGKMANPLVAP 651
                    + L ++ M+ N+   + L+ A LP M+ +  G IV+V++  G++  P    
Sbjct: 131 VKGPAHKISLELDKKIMDANYFGPITLTKALLPNMISRRTGQIVLVNNIQGRLGIPFRTA 190

Query: 652 YSASKFALDGFFSSIRKEYSVTKVNVS 732
           Y+ASK A  GFF  +R E     V VS
Sbjct: 191 YAASKHAALGFFDCLRAEVEEFDVVVS 217


  Database: RefSeq49_SP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 11,343,932
  Number of sequences in database:  24,897
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 26,983,345
Number of extensions: 757475
Number of successful extensions: 2548
Number of sequences better than 1.0e-05: 31
Number of HSP's gapped: 2513
Number of HSP's successfully gapped: 31
Length of query: 344
Length of database: 11,343,932
Length adjustment: 100
Effective length of query: 244
Effective length of database: 8,854,232
Effective search space: 2160432608
Effective search space used: 2160432608
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)

Search to Sscrofa10_2

BLASTN 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-002119
         (1033 letters)

Database: Sscrofa_10.2.fasta 
           4582 sequences; 2,808,509,378 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|GL894531.1| Sus scrofa unplaced genomic scaffold chrU_scaffol...   498   e-138

>gb|GL894531.1| Sus scrofa unplaced genomic scaffold chrU_scaffold3187
          Length = 27161

 Score =  498 bits (251), Expect = e-138
 Identities = 267/271 (98%), Gaps = 1/271 (0%)
 Strand = Plus / Minus

                                                                        
Query: 763  acagacacggccatgacagcagtggctgggatactcaacgtacaaccatctccaaaggaa 822
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1251 acagacacggccatgacagcagtggctgggatactcaacgtacaaccatctccaaaggaa 1192

                                                                        
Query: 823  gaatgcgccctggaaattatcaaaggggcagctttgcgccaagaggaagtgtattatgac 882
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1191 gaatgcgccctggaaattatcaaaggggcagctttgcgccaagaggaagtgtattatgac 1132

                                                                        
Query: 883  agctcaatcttgacttctctcctgctgggaaatccagggaggaagatcctggaatttctg 942
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1131 agctcaatcttgacttctctcctgctgggaaatccagggaggaagatcctggaatttctg 1072

                                                                        
Query: 943  tccttacgacattataatatggaaaagtttacaaaacactaggcccttgtttagggctgg 1002
            ||||||||||||||||||||||||| |||||||||  |||||||||||||||||||||||
Sbjct: 1071 tccttacgacattataatatggaaaggtttacaaacaactaggcccttgtttagggctgg 1012

                                           
Query: 1003 gcatgataagggggcttgcaggtattctgcc 1033
            ||||||||| |||||||||||||||||||||
Sbjct: 1011 gcatgataa-ggggcttgcaggtattctgcc 982



 Score =  373 bits (188), Expect = e-100
 Identities = 188/188 (100%)
 Strand = Plus / Minus

                                                                         
Query: 436   gggggcctggacatgctcattctcaaccacatcacccacgcctccatgactccgtttagt 495
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23005 gggggcctggacatgctcattctcaaccacatcacccacgcctccatgactccgtttagt 22946

                                                                         
Query: 496   gacgacatccacctcgtgcgcagaagcatggaggtcaacttcctcagctacgtggtcctc 555
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22945 gacgacatccacctcgtgcgcagaagcatggaggtcaacttcctcagctacgtggtcctc 22886

                                                                         
Query: 556   agcgtggccgccttgcccatgctgaagcagagcaacgggagcatcgtggtggtctcgtcc 615
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22885 agcgtggccgccttgcccatgctgaagcagagcaacgggagcatcgtggtggtctcgtcc 22826

                     
Query: 616   caggcggg 623
             ||||||||
Sbjct: 22825 caggcggg 22818



 Score =  367 bits (185), Expect = 8e-99
 Identities = 185/185 (100%)
 Strand = Plus / Minus

                                                                         
Query: 9     acaattcagaggctgctgcctgcctaggaggttgtagaaagctctgtaggttctctctgt 68
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25139 acaattcagaggctgctgcctgcctaggaggttgtagaaagctctgtaggttctctctgt 25080

                                                                         
Query: 69    gtgtcctacagggctcctcgggccaggtccctgtctgatggcttttatgaaaaaatatct 128
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25079 gtgtcctacagggctcctcgggccaggtccctgtctgatggcttttatgaaaaaatatct 25020

                                                                         
Query: 129   cctccctattctggggatcttcttggcctactactactattccgcaaatgaggaattcag 188
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25019 cctccctattctggggatcttcttggcctactactactattccgcaaatgaggaattcag 24960

                  
Query: 189   accag 193
             |||||
Sbjct: 24959 accag 24955



 Score =  287 bits (145), Expect = 6e-75
 Identities = 145/145 (100%)
 Strand = Plus / Minus

                                                                        
Query: 622  gggaaaatggcgaatccacttgttgctccctattctgcaagcaagtttgctctggacggg 681
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3175 gggaaaatggcgaatccacttgttgctccctattctgcaagcaagtttgctctggacggg 3116

                                                                        
Query: 682  ttcttctcctctatcaggaaagaatattcagtgaccaaggtcaacgtgtcaatcacgctc 741
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3115 ttcttctcctctatcaggaaagaatattcagtgaccaaggtcaacgtgtcaatcacgctc 3056

                                     
Query: 742  tgtatcctcggtctcatagacacag 766
            |||||||||||||||||||||||||
Sbjct: 3055 tgtatcctcggtctcatagacacag 3031



 Score =  274 bits (138), Expect = 9e-71
 Identities = 138/138 (100%)
 Strand = Plus / Minus

                                                                         
Query: 190   ccagagatgcttcgaggaaagaaagtgattgtcacaggggccagcaaggggatcggaaga 249
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24199 ccagagatgcttcgaggaaagaaagtgattgtcacaggggccagcaaggggatcggaaga 24140

                                                                         
Query: 250   gagatggcctatcatctggcgaggatgggagcccatgtggtggtgacagcgaggtcagaa 309
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24139 gagatggcctatcatctggcgaggatgggagcccatgtggtggtgacagcgaggtcagaa 24080

                               
Query: 310   gaaactctcaagaaggtg 327
             ||||||||||||||||||
Sbjct: 24079 gaaactctcaagaaggtg 24062



 Score =  228 bits (115), Expect = 5e-57
 Identities = 115/115 (100%)
 Strand = Plus / Minus

                                                                         
Query: 323   aggtggtgtcccactgcctggagcttggcgcgtcttcagcacactacgttgctggcacca 382
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23221 aggtggtgtcccactgcctggagcttggcgcgtcttcagcacactacgttgctggcacca 23162

                                                                    
Query: 383   tggaggacatgaccttcgcagagcaatttgttgccaaagctggaaagctcctggg 437
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23161 tggaggacatgaccttcgcagagcaatttgttgccaaagctggaaagctcctggg 23107


  Database: Sscrofa_10.2.fasta
    Posted date:  Nov 16, 2011 10:34 AM
  Number of letters in database: 2,808,509,378
  Number of sequences in database:  4582
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 29,557,225
Number of extensions: 146
Number of successful extensions: 146
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 145
Number of HSP's successfully gapped: 6
Length of query: 1033
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 1012
Effective length of database: 2,808,413,156
Effective search space: 2842114113872
Effective search space used: 2842114113872
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 29 (58.0 bits)