Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002209
(1143 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001073823.1| glutathione S-transferase mu 1 [Bos taurus]. 390 e-108
Alignment gi|NP_001077241.1| glutathione S-transferase mu 1 [Bos taurus]. 387 e-107
Alignment gi|NP_787019.1| glutathione S-transferase Mu 1 [Bos taurus]. 384 e-107
Alignment gi|NP_001040025.1| glutathione S-transferase mu 3 [Bos taurus]. 334 8e-92
Alignment gi|XP_002686196.1| PREDICTED: glutathione S-transferase M2 [Bos... 303 1e-82
Alignment gi|XP_886532.1| PREDICTED: glutathione S-transferase M2 isoform... 303 1e-82
Alignment gi|XP_002686197.1| PREDICTED: GSTM2 protein-like [Bos taurus]. 293 3e-79
Alignment gi|XP_002703933.1| PREDICTED: GSTM2 protein-like [Bos taurus]. 293 3e-79
Alignment gi|NP_803482.1| glutathione S-transferase P [Bos taurus]. 105 7e-23
Alignment gi|XP_002699444.1| PREDICTED: glutathione S-transferase, pi 1-l... 99 5e-21
>ref|NP_001073823.1| glutathione S-transferase mu 1 [Bos taurus].
Length = 218
Score = 390 bits (1001), Expect = e-108
Identities = 182/218 (83%), Positives = 202/218 (92%)
Frame = +2
Query: 80 MTLILGYWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLSDKFKLGLDFPNL 259
M + LGYWDIRGLAHAIRLLLEYTDS+YEEKKYTMGDAPDYDRSQWL++KFKLGLDFPNL
Sbjct: 1 MAMTLGYWDIRGLAHAIRLLLEYTDSNYEEKKYTMGDAPDYDRSQWLNEKFKLGLDFPNL 60
Query: 260 PYLIDGAHKLTQSNAILRYIARKHNMCGETEEEKIRVDVLENQANDTSEALASLCYSPDF 439
PYLIDGAH+LTQS AILRYIARKHNMCGETEEEKIRVDVLENQ DT+ LA LCY+P+F
Sbjct: 61 PYLIDGAHRLTQSKAILRYIARKHNMCGETEEEKIRVDVLENQTMDTANELAILCYNPEF 120
Query: 440 EKLKPGYLKEIPEKMKPFSEFLGKRPWFAGDKLTYVDFLAYNVLDLYRIFDPKCLDEFPN 619
EKLK YLKEIP KMK +SEFLG+RPWFAGDKLT+VDFL Y+VLD++RIF+PKCLD FPN
Sbjct: 121 EKLKSQYLKEIPGKMKLYSEFLGRRPWFAGDKLTFVDFLVYDVLDIHRIFEPKCLDAFPN 180
Query: 620 LKAFLSRFEGLERISAYMRSSRFLPHPVYTKMAMWGNK 733
LK F+S FEGL+RISAYM+SSRFLPHPVY+KMA+WGNK
Sbjct: 181 LKDFISHFEGLKRISAYMKSSRFLPHPVYSKMAVWGNK 218
>ref|NP_001077241.1| glutathione S-transferase mu 1 [Bos taurus].
Length = 218
Score = 387 bits (993), Expect = e-107
Identities = 181/218 (83%), Positives = 201/218 (92%)
Frame = +2
Query: 80 MTLILGYWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLSDKFKLGLDFPNL 259
M +ILGYWDIRGLAHAIRLLLEYTDS+YEEKKYTMGDAPDYDRSQWLS+KF LGLDFPNL
Sbjct: 1 MPMILGYWDIRGLAHAIRLLLEYTDSNYEEKKYTMGDAPDYDRSQWLSEKFTLGLDFPNL 60
Query: 260 PYLIDGAHKLTQSNAILRYIARKHNMCGETEEEKIRVDVLENQANDTSEALASLCYSPDF 439
PYLIDGAHKLTQSNAILRYIARKHNMCGETEEEKIRVD+LENQ D +A +CYSPDF
Sbjct: 61 PYLIDGAHKLTQSNAILRYIARKHNMCGETEEEKIRVDILENQTMDVRLHMARICYSPDF 120
Query: 440 EKLKPGYLKEIPEKMKPFSEFLGKRPWFAGDKLTYVDFLAYNVLDLYRIFDPKCLDEFPN 619
E LKPG+LKEIPEKMK FS+FL KRPWFAGDKLTYVDFLAY+VLD +RIF+P CLDEFPN
Sbjct: 121 ETLKPGFLKEIPEKMKLFSDFLAKRPWFAGDKLTYVDFLAYDVLDRHRIFEPTCLDEFPN 180
Query: 620 LKAFLSRFEGLERISAYMRSSRFLPHPVYTKMAMWGNK 733
LK F++RFEGL+RISAYM+SSRF P+P++ K+A+WGNK
Sbjct: 181 LKDFITRFEGLKRISAYMKSSRFHPNPMFLKLAVWGNK 218
>ref|NP_787019.1| glutathione S-transferase Mu 1 [Bos taurus].
Length = 218
Score = 384 bits (986), Expect = e-107
Identities = 176/218 (80%), Positives = 203/218 (93%)
Frame = +2
Query: 80 MTLILGYWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLSDKFKLGLDFPNL 259
M +ILGYWDIRGLAHAIRLLLEYTD++YEE++Y++GDAPDYDRSQWL++KFKLGLDFPNL
Sbjct: 1 MPMILGYWDIRGLAHAIRLLLEYTDTNYEERQYSVGDAPDYDRSQWLNEKFKLGLDFPNL 60
Query: 260 PYLIDGAHKLTQSNAILRYIARKHNMCGETEEEKIRVDVLENQANDTSEALASLCYSPDF 439
PYLIDG HKLTQSNAILRYIARKHN+CGETEEE IRVD+LENQ D A+A +CYSPDF
Sbjct: 61 PYLIDGTHKLTQSNAILRYIARKHNLCGETEEEMIRVDILENQVMDVRLAMARICYSPDF 120
Query: 440 EKLKPGYLKEIPEKMKPFSEFLGKRPWFAGDKLTYVDFLAYNVLDLYRIFDPKCLDEFPN 619
EKLKPG+LKEIPEK+K FSEFLGKRPWFAGDKLTYVDFL Y+VLD++RIF+PKCLD FPN
Sbjct: 121 EKLKPGFLKEIPEKIKLFSEFLGKRPWFAGDKLTYVDFLVYDVLDMHRIFEPKCLDAFPN 180
Query: 620 LKAFLSRFEGLERISAYMRSSRFLPHPVYTKMAMWGNK 733
LK F+SRFEGL++ISAYM+SSRFLP P++ K+A+WGNK
Sbjct: 181 LKDFISRFEGLKKISAYMKSSRFLPGPLFMKLAVWGNK 218
>ref|NP_001040025.1| glutathione S-transferase mu 3 [Bos taurus].
Length = 225
Score = 334 bits (857), Expect = 8e-92
Identities = 153/220 (69%), Positives = 187/220 (85%)
Frame = +2
Query: 74 NTMTLILGYWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLSDKFKLGLDFP 253
++ +++LGYWDIRGLAHAIR+LLE+TD+SYEEK+YT G+APDYD+SQWL KFKL LDFP
Sbjct: 3 SSKSMVLGYWDIRGLAHAIRMLLEFTDTSYEEKRYTCGEAPDYDKSQWLDVKFKLDLDFP 62
Query: 254 NLPYLIDGAHKLTQSNAILRYIARKHNMCGETEEEKIRVDVLENQANDTSEALASLCYSP 433
NLPYL+DG ++LTQSNAILRYIARKHNMCG+TEEE+IRVD++ENQ D L LCY+P
Sbjct: 63 NLPYLMDGKNRLTQSNAILRYIARKHNMCGDTEEERIRVDIMENQIMDFRMQLVQLCYNP 122
Query: 434 DFEKLKPGYLKEIPEKMKPFSEFLGKRPWFAGDKLTYVDFLAYNVLDLYRIFDPKCLDEF 613
D EKLKP YL+++P ++K FS FLGK WFAG+KLT+VDFL Y+VLD R+F+PKCLDEF
Sbjct: 123 DHEKLKPRYLEQLPGQLKQFSLFLGKYSWFAGEKLTFVDFLTYDVLDQNRMFEPKCLDEF 182
Query: 614 PNLKAFLSRFEGLERISAYMRSSRFLPHPVYTKMAMWGNK 733
PNLKAF+ RFE LE+I+ YM+S RFL PV KMA WGN+
Sbjct: 183 PNLKAFMCRFEALEKIATYMQSDRFLKMPVNNKMAQWGNR 222
>ref|XP_002686196.1| PREDICTED: glutathione S-transferase M2 [Bos taurus].
Length = 181
Score = 303 bits (777), Expect = 1e-82
Identities = 148/218 (67%), Positives = 168/218 (77%)
Frame = +2
Query: 80 MTLILGYWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLSDKFKLGLDFPNL 259
M +ILGYWDIRGLAHAIRLLLEYTD++YEE++Y++GDAPDYDRSQWL +KFKLGLDFPNL
Sbjct: 1 MPMILGYWDIRGLAHAIRLLLEYTDTNYEERQYSVGDAPDYDRSQWLDEKFKLGLDFPNL 60
Query: 260 PYLIDGAHKLTQSNAILRYIARKHNMCGETEEEKIRVDVLENQANDTSEALASLCYSPDF 439
PYLIDG HKLTQSNAILRYIARKHNMCGETEEE IRVD+LENQ D A+A +CYSPDF
Sbjct: 61 PYLIDGTHKLTQSNAILRYIARKHNMCGETEEEMIRVDILENQVMDVRFAMARICYSPDF 120
Query: 440 EKLKPGYLKEIPEKMKPFSEFLGKRPWFAGDKLTYVDFLAYNVLDLYRIFDPKCLDEFPN 619
EKLKPG+LKEIPEK+K FSEFLGKRPWFAGDK
Sbjct: 121 EKLKPGFLKEIPEKIKLFSEFLGKRPWFAGDK---------------------------- 152
Query: 620 LKAFLSRFEGLERISAYMRSSRFLPHPVYTKMAMWGNK 733
GL++ISAYM+SSRFLP P++ K+A+WGNK
Sbjct: 153 ---------GLKKISAYMKSSRFLPGPLFLKLAVWGNK 181
>ref|XP_886532.1| PREDICTED: glutathione S-transferase M2 isoform 2 [Bos taurus].
Length = 181
Score = 303 bits (777), Expect = 1e-82
Identities = 148/218 (67%), Positives = 168/218 (77%)
Frame = +2
Query: 80 MTLILGYWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLSDKFKLGLDFPNL 259
M +ILGYWDIRGLAHAIRLLLEYTD++YEE++Y++GDAPDYDRSQWL +KFKLGLDFPNL
Sbjct: 1 MPMILGYWDIRGLAHAIRLLLEYTDTNYEERQYSVGDAPDYDRSQWLDEKFKLGLDFPNL 60
Query: 260 PYLIDGAHKLTQSNAILRYIARKHNMCGETEEEKIRVDVLENQANDTSEALASLCYSPDF 439
PYLIDG HKLTQSNAILRYIARKHNMCGETEEE IRVD+LENQ D A+A +CYSPDF
Sbjct: 61 PYLIDGTHKLTQSNAILRYIARKHNMCGETEEEMIRVDILENQVMDVRFAMARICYSPDF 120
Query: 440 EKLKPGYLKEIPEKMKPFSEFLGKRPWFAGDKLTYVDFLAYNVLDLYRIFDPKCLDEFPN 619
EKLKPG+LKEIPEK+K FSEFLGKRPWFAGDK
Sbjct: 121 EKLKPGFLKEIPEKIKLFSEFLGKRPWFAGDK---------------------------- 152
Query: 620 LKAFLSRFEGLERISAYMRSSRFLPHPVYTKMAMWGNK 733
GL++ISAYM+SSRFLP P++ K+A+WGNK
Sbjct: 153 ---------GLKKISAYMKSSRFLPGPLFLKLAVWGNK 181
>ref|XP_002686197.1| PREDICTED: GSTM2 protein-like [Bos taurus].
Length = 181
Score = 293 bits (749), Expect = 3e-79
Identities = 146/218 (66%), Positives = 164/218 (75%)
Frame = +2
Query: 80 MTLILGYWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLSDKFKLGLDFPNL 259
MT+ILGYWDIRGLAHAIRLLLEYTDS+Y+EKKYTMGDAPDYDRSQWL++K KLGLDFPNL
Sbjct: 1 MTMILGYWDIRGLAHAIRLLLEYTDSNYKEKKYTMGDAPDYDRSQWLNEKSKLGLDFPNL 60
Query: 260 PYLIDGAHKLTQSNAILRYIARKHNMCGETEEEKIRVDVLENQANDTSEALASLCYSPDF 439
PYLIDG HKLTQSNAILR+IARKHNMCGETEEE IRVD+LENQ D +A +CYSPDF
Sbjct: 61 PYLIDGTHKLTQSNAILRHIARKHNMCGETEEENIRVDLLENQVMDVRLHMARICYSPDF 120
Query: 440 EKLKPGYLKEIPEKMKPFSEFLGKRPWFAGDKLTYVDFLAYNVLDLYRIFDPKCLDEFPN 619
EKLKPGYLKEIP +MK FS FLGKR WFAG+K
Sbjct: 121 EKLKPGYLKEIPGRMKLFSVFLGKRCWFAGNK---------------------------- 152
Query: 620 LKAFLSRFEGLERISAYMRSSRFLPHPVYTKMAMWGNK 733
GL++ISAYM+SS FLP P++ K+A+WGNK
Sbjct: 153 ---------GLKKISAYMKSSHFLPGPLFLKLAVWGNK 181
>ref|XP_002703933.1| PREDICTED: GSTM2 protein-like [Bos taurus].
Length = 181
Score = 293 bits (749), Expect = 3e-79
Identities = 146/218 (66%), Positives = 164/218 (75%)
Frame = +2
Query: 80 MTLILGYWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLSDKFKLGLDFPNL 259
MT+ILGYWDIRGLAHAIRLLLEYTDS+Y+EKKYTMGDAPDYDRSQWL++K KLGLDFPNL
Sbjct: 1 MTMILGYWDIRGLAHAIRLLLEYTDSNYKEKKYTMGDAPDYDRSQWLNEKSKLGLDFPNL 60
Query: 260 PYLIDGAHKLTQSNAILRYIARKHNMCGETEEEKIRVDVLENQANDTSEALASLCYSPDF 439
PYLIDG HKLTQSNAILR+IARKHNMCGETEEE IRVD+LENQ D +A +CYSPDF
Sbjct: 61 PYLIDGTHKLTQSNAILRHIARKHNMCGETEEENIRVDLLENQVMDVRLHMARICYSPDF 120
Query: 440 EKLKPGYLKEIPEKMKPFSEFLGKRPWFAGDKLTYVDFLAYNVLDLYRIFDPKCLDEFPN 619
EKLKPGYLKEIP +MK FS FLGKR WFAG+K
Sbjct: 121 EKLKPGYLKEIPGRMKLFSVFLGKRCWFAGNK---------------------------- 152
Query: 620 LKAFLSRFEGLERISAYMRSSRFLPHPVYTKMAMWGNK 733
GL++ISAYM+SS FLP P++ K+A+WGNK
Sbjct: 153 ---------GLKKISAYMKSSHFLPGPLFLKLAVWGNK 181
>ref|NP_803482.1| glutathione S-transferase P [Bos taurus].
Length = 210
Score = 105 bits (262), Expect = 7e-23
Identities = 59/206 (28%), Positives = 106/206 (51%), Gaps = 4/206 (1%)
Frame = +2
Query: 98 YWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLSDKFKLGLDFPNLPYLIDG 277
Y+ ++G A+R+LL S++E+ M WL K + LP DG
Sbjct: 8 YFPVQGRCEAMRMLLADQGQSWKEEVVAM--------QSWLQGPLKASCLYGQLPKFQDG 59
Query: 278 AHKLTQSNAILRYIARKHNMCGETEEEKIRVDVLENQANDTSEALASLCYSPDFEKLKPG 457
L QSNAILR++ R + G+ ++E VD++ + D SL Y+ ++E K
Sbjct: 60 DLTLYQSNAILRHLGRTLGLYGKDQQEAALVDMVNDGVEDLRCKYVSLIYT-NYEAGKED 118
Query: 458 YLKEIPEKMKPFSEFL----GKRPWFAGDKLTYVDFLAYNVLDLYRIFDPKCLDEFPNLK 625
Y+K +P+ +KPF L G + + GD++++ D+ ++L ++++ P CLD FP L
Sbjct: 119 YVKALPQHLKPFETLLSQNKGGQAFIVGDQISFADYNLLDLLRIHQVLAPSCLDSFPLLS 178
Query: 626 AFLSRFEGLERISAYMRSSRFLPHPV 703
A+++R ++ A++ S + P+
Sbjct: 179 AYVARLNSRPKLKAFLASPEHMNRPI 204
>ref|XP_002699444.1| PREDICTED: glutathione S-transferase, pi 1-like [Bos taurus].
Length = 231
Score = 99.4 bits (246), Expect = 5e-21
Identities = 63/210 (30%), Positives = 104/210 (49%), Gaps = 7/210 (3%)
Frame = +2
Query: 98 YWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLSDKFKLGLDFPNLPYLIDG 277
Y+ RG A+R+LL D S++E+ T + WL K + LP DG
Sbjct: 29 YFPTRGRCEALRMLLADQDQSWKEEVVT--------KESWLQGPLKASCLYGQLPKFQDG 80
Query: 278 AHKLTQSNAILRYIARKHNMCGETEEEKIRVDVLENQANDTSEALASLCYSPDFEKLKPG 457
L QSNAILR++ R + G E E VD++ + D L + E+ K
Sbjct: 81 DLTLYQSNAILRHLGRSFGLYGTDEREAALVDMVNDGLEDLRRHCGHLIHHKR-EEDKAQ 139
Query: 458 YLKEIPEKMKPFSEFL----GKRPWFAGDKLTYVDFLAYNVLDL---YRIFDPKCLDEFP 616
Y++E+P ++PF L G + + GD++++ D YN+LDL +++ P CLD FP
Sbjct: 140 YVQELPVHLQPFETLLSQNQGGQAFIVGDQISFAD---YNLLDLLLNHQVLVPGCLDPFP 196
Query: 617 NLKAFLSRFEGLERISAYMRSSRFLPHPVY 706
L A+++R ++ A++ S + P++
Sbjct: 197 LLSAYVARLSARPKLKAFLASPEHVNRPIF 226
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 50,229,760
Number of extensions: 1678524
Number of successful extensions: 7530
Number of sequences better than 1.0e-05: 16
Number of HSP's gapped: 7457
Number of HSP's successfully gapped: 18
Length of query: 381
Length of database: 17,681,374
Length adjustment: 104
Effective length of query: 277
Effective length of database: 14,240,222
Effective search space: 3944541494
Effective search space used: 3944541494
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002209
(1143 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_537038.2| PREDICTED: similar to Glutathione S-transferase... 374 e-103
Alignment gi|XP_537037.1| PREDICTED: similar to Glutathione S-transferase... 333 1e-91
Alignment gi|XP_865995.1| PREDICTED: similar to glutathione S-transferase... 299 4e-81
Alignment gi|XP_865966.1| PREDICTED: similar to glutathione-S-transferase... 297 1e-80
Alignment gi|XP_852576.1| PREDICTED: similar to Glutathione S-transferase... 215 6e-56
Alignment gi|XP_537961.2| PREDICTED: similar to Glutathione S-transferase... 102 7e-22
Alignment gi|XP_533213.2| PREDICTED: similar to Glutathione S-transferase... 102 7e-22
Alignment gi|XP_532423.2| PREDICTED: similar to Glutathione S-transferase... 100 3e-21
Alignment gi|XP_854117.1| PREDICTED: similar to Glutathione S-transferase... 100 3e-21
Alignment gi|XP_533214.1| PREDICTED: similar to glutathione S-transferase... 99 6e-21
>ref|XP_537038.2| PREDICTED: similar to Glutathione S-transferase Mu 1 (GSTM1-1) (GST
class-mu 1) (GSTM1a-1a) (GSTM1b-1b) (HB subunit 4)
(GTH4) isoform 1 [Canis familiaris].
Length = 218
Score = 374 bits (959), Expect = e-103
Identities = 171/218 (78%), Positives = 197/218 (90%)
Frame = +2
Query: 80 MTLILGYWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLSDKFKLGLDFPNL 259
M +I GYWDIRGLAHA+RLLLEYTDS YEEKKYTMGDAPDYDRSQWL++KFKLGLDFPNL
Sbjct: 1 MVMIFGYWDIRGLAHAVRLLLEYTDSHYEEKKYTMGDAPDYDRSQWLNEKFKLGLDFPNL 60
Query: 260 PYLIDGAHKLTQSNAILRYIARKHNMCGETEEEKIRVDVLENQANDTSEALASLCYSPDF 439
PYLIDGAHK+TQSNAILRYIARKHN+CGETEEEKIRVD+LEN+ DT A +CYSPDF
Sbjct: 61 PYLIDGAHKITQSNAILRYIARKHNLCGETEEEKIRVDILENEVMDTRIYFARICYSPDF 120
Query: 440 EKLKPGYLKEIPEKMKPFSEFLGKRPWFAGDKLTYVDFLAYNVLDLYRIFDPKCLDEFPN 619
EKLKP Y+K IP+KMK +S+FLGKRPWFAG+KLTYVDFL Y++LDL+RIF+P LD FPN
Sbjct: 121 EKLKPEYVKAIPDKMKLYSQFLGKRPWFAGEKLTYVDFLVYDILDLHRIFEPTSLDAFPN 180
Query: 620 LKAFLSRFEGLERISAYMRSSRFLPHPVYTKMAMWGNK 733
LK F++RFEGL+ ISAYM+SSRF+P P++ K+AMWGNK
Sbjct: 181 LKEFMARFEGLKNISAYMKSSRFVPGPLFLKIAMWGNK 218
>ref|XP_537037.1| PREDICTED: similar to Glutathione S-transferase Mu 3 (GSTM3-3) (GST
class-mu 3) (hGSTM3-3) isoform 1 [Canis familiaris].
Length = 226
Score = 333 bits (855), Expect = 1e-91
Identities = 153/216 (70%), Positives = 184/216 (85%)
Frame = +2
Query: 86 LILGYWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLSDKFKLGLDFPNLPY 265
++LGYWDIRGLAHAIR+LLE+TD+ YEE++YT G+APDYD+SQWL KFKL LDFPNLPY
Sbjct: 8 MVLGYWDIRGLAHAIRMLLEFTDTCYEERRYTCGEAPDYDKSQWLDVKFKLDLDFPNLPY 67
Query: 266 LIDGAHKLTQSNAILRYIARKHNMCGETEEEKIRVDVLENQANDTSEALASLCYSPDFEK 445
L+DG +K+TQSNAILRYIARKHNMCGETEEE+IRVD++ENQ D L LCYSPD EK
Sbjct: 68 LMDGKNKITQSNAILRYIARKHNMCGETEEERIRVDIMENQIMDFRIQLVQLCYSPDLEK 127
Query: 446 LKPGYLKEIPEKMKPFSEFLGKRPWFAGDKLTYVDFLAYNVLDLYRIFDPKCLDEFPNLK 625
LKP YL+++P ++K FS FLGK WFAG+KLT+VDFL Y+VLD R+F+PKCLDEFPNLK
Sbjct: 128 LKPRYLEQLPGQLKQFSLFLGKFSWFAGEKLTFVDFLTYDVLDQNRMFEPKCLDEFPNLK 187
Query: 626 AFLSRFEGLERISAYMRSSRFLPHPVYTKMAMWGNK 733
AF+ RFE LE+I+ YM+S RFL P+ KMA+WGNK
Sbjct: 188 AFMCRFEALEKIANYMQSDRFLKMPINNKMALWGNK 223
>ref|XP_865995.1| PREDICTED: similar to glutathione S-transferase M1 isoform 2
isoform 2 [Canis familiaris].
Length = 181
Score = 299 bits (765), Expect = 4e-81
Identities = 145/218 (66%), Positives = 165/218 (75%)
Frame = +2
Query: 80 MTLILGYWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLSDKFKLGLDFPNL 259
M +I GYWDIRGLAHA+RLLLEYTDS YEEKKYTMGDAPDYDRSQWL++KFKLGLDFPNL
Sbjct: 1 MVMIFGYWDIRGLAHAVRLLLEYTDSHYEEKKYTMGDAPDYDRSQWLNEKFKLGLDFPNL 60
Query: 260 PYLIDGAHKLTQSNAILRYIARKHNMCGETEEEKIRVDVLENQANDTSEALASLCYSPDF 439
PYLIDGAHK+TQSNAILRYIARKHN+CGETEEEKIRVD+LEN+ DT A +CYSPDF
Sbjct: 61 PYLIDGAHKITQSNAILRYIARKHNLCGETEEEKIRVDILENEVMDTRIYFARICYSPDF 120
Query: 440 EKLKPGYLKEIPEKMKPFSEFLGKRPWFAGDKLTYVDFLAYNVLDLYRIFDPKCLDEFPN 619
EKLKP Y+K IP+KMK +S+FLGKRPWFAG+K
Sbjct: 121 EKLKPEYVKAIPDKMKLYSQFLGKRPWFAGEK---------------------------- 152
Query: 620 LKAFLSRFEGLERISAYMRSSRFLPHPVYTKMAMWGNK 733
GL+ ISAYM+SSRF+P P++ K+AMWGNK
Sbjct: 153 ---------GLKNISAYMKSSRFVPGPLFLKIAMWGNK 181
>ref|XP_865966.1| PREDICTED: similar to glutathione-S-transferase, mu 5 isoform 2
[Canis familiaris].
Length = 194
Score = 297 bits (760), Expect = 1e-80
Identities = 136/187 (72%), Positives = 162/187 (86%)
Frame = +2
Query: 86 LILGYWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLSDKFKLGLDFPNLPY 265
++LGYWDIRGLAHAIR+LLE+TD+ YEE++YT G+APDYD+SQWL KFKL LDFPNLPY
Sbjct: 8 MVLGYWDIRGLAHAIRMLLEFTDTCYEERRYTCGEAPDYDKSQWLDVKFKLDLDFPNLPY 67
Query: 266 LIDGAHKLTQSNAILRYIARKHNMCGETEEEKIRVDVLENQANDTSEALASLCYSPDFEK 445
L+DG +K+TQSNAILRYIARKHNMCGETEEE+IRVD++ENQ D L LCYSPD EK
Sbjct: 68 LMDGKNKITQSNAILRYIARKHNMCGETEEERIRVDIMENQIMDFRIQLVQLCYSPDLEK 127
Query: 446 LKPGYLKEIPEKMKPFSEFLGKRPWFAGDKLTYVDFLAYNVLDLYRIFDPKCLDEFPNLK 625
LKP YL+++P ++K FS FLGK WFAG+KLT+VDFL Y+VLD R+F+PKCLDEFPNLK
Sbjct: 128 LKPRYLEQLPGQLKQFSLFLGKFSWFAGEKLTFVDFLTYDVLDQNRMFEPKCLDEFPNLK 187
Query: 626 AFLSRFE 646
AF+ RFE
Sbjct: 188 AFMCRFE 194
>ref|XP_852576.1| PREDICTED: similar to Glutathione S-transferase Mu 1 (GSTM1-1) (GST
class-mu 1) (GSTM1a-1a) (GSTM1b-1b) (HB subunit 4)
(GTH4) [Canis familiaris].
Length = 218
Score = 215 bits (548), Expect = 6e-56
Identities = 112/206 (54%), Positives = 133/206 (64%), Gaps = 11/206 (5%)
Frame = +2
Query: 41 WRSLSGQGSETNTMTLILGYW-----------DIRGLAHAIRLLLEYTDSSYEEKKYTMG 187
W+++SGQ + L +W + G + DS YEEKKYTMG
Sbjct: 23 WKNISGQTNRVQVRKDPLSHWTESRTHPFSIPESAGARRPPAPGVHGLDSHYEEKKYTMG 82
Query: 188 DAPDYDRSQWLSDKFKLGLDFPNLPYLIDGAHKLTQSNAILRYIARKHNMCGETEEEKIR 367
DAP YDRSQWL++KFKLGLDFPNLPYLIDGAHK+TQSNAILRYIARKHN+ G+ E
Sbjct: 83 DAPGYDRSQWLNEKFKLGLDFPNLPYLIDGAHKITQSNAILRYIARKHNLWGDGRGED-- 140
Query: 368 VDVLENQANDTSEALASLCYSPDFEKLKPGYLKEIPEKMKPFSEFLGKRPWFAGDKLTYV 547
S+CYSPDFEKLKP Y+K P+KMK +S+ LGKRPWFAG+KLTYV
Sbjct: 141 ----------------SICYSPDFEKLKPEYVKANPDKMKLYSQLLGKRPWFAGEKLTYV 184
Query: 548 DFLAYNVLDLYRIFDPKCLDEFPNLK 625
DF ++LDL RI +P LD PNLK
Sbjct: 185 DFPVSDILDLPRIVEPTSLDALPNLK 210
>ref|XP_537961.2| PREDICTED: similar to Glutathione S-transferase P (GST 7-7) (Chain
7) (GST class-pi) [Canis familiaris].
Length = 231
Score = 102 bits (254), Expect = 7e-22
Identities = 59/206 (28%), Positives = 106/206 (51%), Gaps = 4/206 (1%)
Frame = +2
Query: 98 YWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLSDKFKLGLDFPNLPYLIDG 277
Y+ +RG A+R+LL S++E+ TM W+ K + LP DG
Sbjct: 29 YFPVRGRCEAMRMLLADQGQSWKEEVVTM--------ETWMKGSLKASCLYGQLPKFQDG 80
Query: 278 AHKLTQSNAILRYIARKHNMCGETEEEKIRVDVLENQANDTSEALASLCYSPDFEKLKPG 457
L QSNAILR++ R + G+ ++E +DV+ + D A L Y+ ++E K
Sbjct: 81 DLTLYQSNAILRHLGRSLGLYGKDQQEAALLDVVNDGVEDLRCKYALLIYT-NYEAGKEE 139
Query: 458 YLKEIPEKMKPFSEFL----GKRPWFAGDKLTYVDFLAYNVLDLYRIFDPKCLDEFPNLK 625
Y+K +P +KPF L G + + G+++++ D+ ++L ++++ P CLD FP L
Sbjct: 140 YVKALPGYLKPFETLLSQNEGGQAFIVGNQISFADYNLLDLLLIHQVLAPSCLDSFPLLS 199
Query: 626 AFLSRFEGLERISAYMRSSRFLPHPV 703
A+++R ++ A++ S + P+
Sbjct: 200 AYVARLSARPKLKAFLSSPEHVNRPI 225
>ref|XP_533213.2| PREDICTED: similar to Glutathione S-transferase P (GST 7-7) (Chain
7) (GST class-pi) [Canis familiaris].
Length = 317
Score = 102 bits (254), Expect = 7e-22
Identities = 59/206 (28%), Positives = 106/206 (51%), Gaps = 4/206 (1%)
Frame = +2
Query: 98 YWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLSDKFKLGLDFPNLPYLIDG 277
Y+ +RG A+R+LL S++E+ TM W+ K + LP DG
Sbjct: 115 YFPVRGRCEAMRMLLADQGQSWKEEVVTM--------ETWMKGSLKASCLYGQLPKFQDG 166
Query: 278 AHKLTQSNAILRYIARKHNMCGETEEEKIRVDVLENQANDTSEALASLCYSPDFEKLKPG 457
L QSNAILR++ R + G+ ++E +DV+ + D A L Y+ ++E K
Sbjct: 167 DLTLYQSNAILRHLGRSLGLYGKDQQEAALLDVVNDGVEDLRCKYALLIYT-NYEAGKEE 225
Query: 458 YLKEIPEKMKPFSEFL----GKRPWFAGDKLTYVDFLAYNVLDLYRIFDPKCLDEFPNLK 625
Y+K +P +KPF L G + + G+++++ D+ ++L ++++ P CLD FP L
Sbjct: 226 YVKALPGYLKPFETLLSQNEGGQAFIVGNQISFADYNLLDLLLIHQVLAPSCLDSFPLLS 285
Query: 626 AFLSRFEGLERISAYMRSSRFLPHPV 703
A+++R ++ A++ S + P+
Sbjct: 286 AYVARLSARPKLKAFLSSPEHVNRPI 311
>ref|XP_532423.2| PREDICTED: similar to Glutathione S-transferase P (GST 7-7) (Chain
7) (GST class-pi) [Canis familiaris].
Length = 210
Score = 100 bits (249), Expect = 3e-21
Identities = 58/206 (28%), Positives = 106/206 (51%), Gaps = 4/206 (1%)
Frame = +2
Query: 98 YWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLSDKFKLGLDFPNLPYLIDG 277
Y+ +RG A+R+LL S++E+ TM W+ K + LP DG
Sbjct: 8 YFPVRGRCEAMRMLLADQSQSWKEEVVTM--------ETWMKGSLKASCLYGQLPKFQDG 59
Query: 278 AHKLTQSNAILRYIARKHNMCGETEEEKIRVDVLENQANDTSEALASLCYSPDFEKLKPG 457
L QSNAILR++ R + G+ ++E +DV+ + D A L Y+ ++E K
Sbjct: 60 DLTLYQSNAILRHLGRSLGLYGKDQQEAALLDVVNDGVEDLRCKYALLIYT-NYEAGKEE 118
Query: 458 YLKEIPEKMKPFSEFL----GKRPWFAGDKLTYVDFLAYNVLDLYRIFDPKCLDEFPNLK 625
Y+K +P +KPF + L G + + G+++++ D+ ++L ++++ P CLD FP L
Sbjct: 119 YVKALPGYLKPFEKLLSQNEGGQAFIVGNQISFADYNLLDLLLIHQVLAPSCLDSFPLLS 178
Query: 626 AFLSRFEGLERISAYMRSSRFLPHPV 703
A+++ ++ A++ S + P+
Sbjct: 179 AYVACLSARPKLKAFLSSPEHVNRPI 204
>ref|XP_854117.1| PREDICTED: similar to Glutathione S-transferase P (GST 7-7) (Chain
7) (GST class-pi) [Canis familiaris].
Length = 318
Score = 100 bits (248), Expect = 3e-21
Identities = 58/206 (28%), Positives = 106/206 (51%), Gaps = 4/206 (1%)
Frame = +2
Query: 98 YWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLSDKFKLGLDFPNLPYLIDG 277
Y+ +RG A+ +LL S++E+ TM W++ K + LP DG
Sbjct: 116 YFPVRGRCEAMHMLLADQGQSWKEEVVTM--------ETWMNGSLKASCLYGQLPKFQDG 167
Query: 278 AHKLTQSNAILRYIARKHNMCGETEEEKIRVDVLENQANDTSEALASLCYSPDFEKLKPG 457
L QSNAILR++ R + G+ ++E +DV+ + D A L Y+ ++E K
Sbjct: 168 DLTLYQSNAILRHLGRSLGLYGKDQQEAALLDVVNDGVEDLRCKYALLIYT-NYEAGKEE 226
Query: 458 YLKEIPEKMKPFSEFL----GKRPWFAGDKLTYVDFLAYNVLDLYRIFDPKCLDEFPNLK 625
Y+K +P +KPF L G + + G+++++ D+ ++L ++++ P CLD FP L
Sbjct: 227 YVKALPGYLKPFEMLLSQNEGGQAFIVGNQISFADYNLLDLLLIHQVLAPSCLDSFPLLS 286
Query: 626 AFLSRFEGLERISAYMRSSRFLPHPV 703
A+++R ++ A++ S + P+
Sbjct: 287 AYVARLSARPKLKAFLLSPEHVNRPI 312
>ref|XP_533214.1| PREDICTED: similar to glutathione S-transferase, pi 1 [Canis
familiaris].
Length = 210
Score = 99.4 bits (246), Expect = 6e-21
Identities = 62/210 (29%), Positives = 105/210 (50%), Gaps = 7/210 (3%)
Frame = +2
Query: 98 YWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLSDKFKLGLDFPNLPYLIDG 277
Y+ +RG A+R+LL S++E+ T + W+ K + LP DG
Sbjct: 8 YFPVRGRCEAMRMLLADQGQSWKEEVVT--------KDSWMQSPLKASCLYGQLPKFQDG 59
Query: 278 AHKLTQSNAILRYIARKHNMCGETEEEKIRVDVLENQANDTSEALASLCYSPDFEKLKPG 457
L QSNAILR++ R + G+ + E VD++ + D + L + +E K
Sbjct: 60 DLTLYQSNAILRHLGRTFGLYGKDQREAALVDMVNDGVEDVRRHCSQLIHH-SYEGGKAR 118
Query: 458 YLKEIPEKMKPFSEFL----GKRPWFAGDKLTYVDFLAYNVLDL---YRIFDPKCLDEFP 616
Y++E+P +KPF L G + + GD++++ D YN+LDL +++ P CLD P
Sbjct: 119 YVQELPGYLKPFETLLIQNQGGQAFIVGDQISFAD---YNLLDLLLNHQVLAPGCLDSHP 175
Query: 617 NLKAFLSRFEGLERISAYMRSSRFLPHPVY 706
L A+++R ++ AY+ S + PV+
Sbjct: 176 LLLAYVTRLSARPKLKAYLASPEHVNRPVH 205
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 52,303,775
Number of extensions: 1719556
Number of successful extensions: 7596
Number of sequences better than 1.0e-05: 17
Number of HSP's gapped: 7539
Number of HSP's successfully gapped: 17
Length of query: 381
Length of database: 18,874,504
Length adjustment: 105
Effective length of query: 276
Effective length of database: 15,374,224
Effective search space: 4243285824
Effective search space used: 4243285824
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002209
(1143 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_000841.1| glutathione S-transferase Mu 4 isoform 1 [Homo ... 385 e-107
Alignment gi|NP_000552.2| glutathione S-transferase Mu 1 isoform 1 [Homo ... 384 e-107
Alignment gi|NP_000839.1| glutathione S-transferase Mu 2 isoform 1 [Homo ... 363 e-100
Alignment gi|NP_000842.2| glutathione S-transferase Mu 5 [Homo sapiens]. 360 1e-99
Alignment gi|NP_000840.2| glutathione S-transferase Mu 3 [Homo sapiens]. 338 5e-93
Alignment gi|NP_671489.1| glutathione S-transferase Mu 4 isoform 2 [Homo ... 336 2e-92
Alignment gi|NP_001135840.1| glutathione S-transferase Mu 2 isoform 2 [Ho... 311 7e-85
Alignment gi|NP_666533.1| glutathione S-transferase Mu 1 isoform 2 [Homo ... 305 7e-83
Alignment gi|NP_000843.1| glutathione S-transferase P [Homo sapiens]. 100 4e-21
Alignment gi|NP_055300.1| hematopoietic prostaglandin D synthase [Homo sa... 74 2e-13
>ref|NP_000841.1| glutathione S-transferase Mu 4 isoform 1 [Homo sapiens].
Length = 218
Score = 385 bits (990), Expect = e-107
Identities = 178/218 (81%), Positives = 202/218 (92%)
Frame = +2
Query: 80 MTLILGYWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLSDKFKLGLDFPNL 259
M++ LGYWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWL++KFKLGLDFPNL
Sbjct: 1 MSMTLGYWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLNEKFKLGLDFPNL 60
Query: 260 PYLIDGAHKLTQSNAILRYIARKHNMCGETEEEKIRVDVLENQANDTSEALASLCYSPDF 439
PYLIDGAHK+TQSNAIL YIARKHN+CGETEEEKIRVD+LENQA D S LA +CYSPDF
Sbjct: 61 PYLIDGAHKITQSNAILCYIARKHNLCGETEEEKIRVDILENQAMDVSNQLARVCYSPDF 120
Query: 440 EKLKPGYLKEIPEKMKPFSEFLGKRPWFAGDKLTYVDFLAYNVLDLYRIFDPKCLDEFPN 619
EKLKP YL+E+P M+ FS+FLGKRPWF GDK+T+VDFLAY+VLDL+RIF+P CLD FPN
Sbjct: 121 EKLKPEYLEELPTMMQHFSQFLGKRPWFVGDKITFVDFLAYDVLDLHRIFEPNCLDAFPN 180
Query: 620 LKAFLSRFEGLERISAYMRSSRFLPHPVYTKMAMWGNK 733
LK F+SRFEGLE+ISAYM+SSRFLP P+YT++A+WGNK
Sbjct: 181 LKDFISRFEGLEKISAYMKSSRFLPKPLYTRVAVWGNK 218
>ref|NP_000552.2| glutathione S-transferase Mu 1 isoform 1 [Homo sapiens].
Length = 218
Score = 384 bits (987), Expect = e-107
Identities = 177/218 (81%), Positives = 202/218 (92%)
Frame = +2
Query: 80 MTLILGYWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLSDKFKLGLDFPNL 259
M +ILGYWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWL++KFKLGLDFPNL
Sbjct: 1 MPMILGYWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLNEKFKLGLDFPNL 60
Query: 260 PYLIDGAHKLTQSNAILRYIARKHNMCGETEEEKIRVDVLENQANDTSEALASLCYSPDF 439
PYLIDGAHK+TQSNAIL YIARKHN+CGETEEEKIRVD+LENQ D L +CY+P+F
Sbjct: 61 PYLIDGAHKITQSNAILCYIARKHNLCGETEEEKIRVDILENQTMDNHMQLGMICYNPEF 120
Query: 440 EKLKPGYLKEIPEKMKPFSEFLGKRPWFAGDKLTYVDFLAYNVLDLYRIFDPKCLDEFPN 619
EKLKP YL+E+PEK+K +SEFLGKRPWFAG+K+T+VDFL Y+VLDL+RIF+PKCLD FPN
Sbjct: 121 EKLKPKYLEELPEKLKLYSEFLGKRPWFAGNKITFVDFLVYDVLDLHRIFEPKCLDAFPN 180
Query: 620 LKAFLSRFEGLERISAYMRSSRFLPHPVYTKMAMWGNK 733
LK F+SRFEGLE+ISAYM+SSRFLP PV++KMA+WGNK
Sbjct: 181 LKDFISRFEGLEKISAYMKSSRFLPRPVFSKMAVWGNK 218
>ref|NP_000839.1| glutathione S-transferase Mu 2 isoform 1 [Homo sapiens].
Length = 218
Score = 363 bits (932), Expect = e-100
Identities = 165/218 (75%), Positives = 196/218 (89%)
Frame = +2
Query: 80 MTLILGYWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLSDKFKLGLDFPNL 259
M + LGYW+IRGLAH+IRLLLEYTDSSYEEKKYTMGDAPDYDRSQWL++KFKLGLDFPNL
Sbjct: 1 MPMTLGYWNIRGLAHSIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLNEKFKLGLDFPNL 60
Query: 260 PYLIDGAHKLTQSNAILRYIARKHNMCGETEEEKIRVDVLENQANDTSEALASLCYSPDF 439
PYLIDG HK+TQSNAILRYIARKHN+CGE+E+E+IR D+LENQ D+ LA LCY PDF
Sbjct: 61 PYLIDGTHKITQSNAILRYIARKHNLCGESEKEQIREDILENQFMDSRMQLAKLCYDPDF 120
Query: 440 EKLKPGYLKEIPEKMKPFSEFLGKRPWFAGDKLTYVDFLAYNVLDLYRIFDPKCLDEFPN 619
EKLKP YL+ +PE +K +S+FLGK+PWF GDK+T+VDF+AY+VL+ ++F+P CLD FPN
Sbjct: 121 EKLKPEYLQALPEMLKLYSQFLGKQPWFLGDKITFVDFIAYDVLERNQVFEPSCLDAFPN 180
Query: 620 LKAFLSRFEGLERISAYMRSSRFLPHPVYTKMAMWGNK 733
LK F+SRFEGLE+ISAYM+SSRFLP PV+TKMA+WGNK
Sbjct: 181 LKDFISRFEGLEKISAYMKSSRFLPRPVFTKMAVWGNK 218
>ref|NP_000842.2| glutathione S-transferase Mu 5 [Homo sapiens].
Length = 218
Score = 360 bits (924), Expect = 1e-99
Identities = 169/218 (77%), Positives = 193/218 (88%)
Frame = +2
Query: 80 MTLILGYWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLSDKFKLGLDFPNL 259
M + LGYWDIRGLAHAIRLLLEYTDSSY EKKYT+GDAPDYDRSQWL++KFKLGLDFPNL
Sbjct: 1 MPMTLGYWDIRGLAHAIRLLLEYTDSSYVEKKYTLGDAPDYDRSQWLNEKFKLGLDFPNL 60
Query: 260 PYLIDGAHKLTQSNAILRYIARKHNMCGETEEEKIRVDVLENQANDTSEALASLCYSPDF 439
PYLIDGAHK+TQSNAILRYIARKHN+CGETEEEKIRVD+LENQ D L LCY PDF
Sbjct: 61 PYLIDGAHKITQSNAILRYIARKHNLCGETEEEKIRVDILENQVMDNHMELVRLCYDPDF 120
Query: 440 EKLKPGYLKEIPEKMKPFSEFLGKRPWFAGDKLTYVDFLAYNVLDLYRIFDPKCLDEFPN 619
EKLKP YL+E+PEK+K +SEFLGKRPWFAGDK+T+VDFLAY+VLD+ RIF+PKCLD F N
Sbjct: 121 EKLKPKYLEELPEKLKLYSEFLGKRPWFAGDKITFVDFLAYDVLDMKRIFEPKCLDAFLN 180
Query: 620 LKAFLSRFEGLERISAYMRSSRFLPHPVYTKMAMWGNK 733
LK F+SRFEGL++ISAYM+SS+FL ++ K A W +K
Sbjct: 181 LKDFISRFEGLKKISAYMKSSQFLRGLLFGKSATWNSK 218
>ref|NP_000840.2| glutathione S-transferase Mu 3 [Homo sapiens].
Length = 225
Score = 338 bits (867), Expect = 5e-93
Identities = 157/217 (72%), Positives = 184/217 (84%)
Frame = +2
Query: 83 TLILGYWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLSDKFKLGLDFPNLP 262
+++LGYWDIRGLAHAIRLLLE+TD+SYEEK+YT G+APDYDRSQWL KFKL LDFPNLP
Sbjct: 6 SMVLGYWDIRGLAHAIRLLLEFTDTSYEEKRYTCGEAPDYDRSQWLDVKFKLDLDFPNLP 65
Query: 263 YLIDGAHKLTQSNAILRYIARKHNMCGETEEEKIRVDVLENQANDTSEALASLCYSPDFE 442
YL+DG +K+TQSNAILRYIARKHNMCGETEEEKIRVD++ENQ D L LCYS D E
Sbjct: 66 YLLDGKNKITQSNAILRYIARKHNMCGETEEEKIRVDIIENQVMDFRTQLIRLCYSSDHE 125
Query: 443 KLKPGYLKEIPEKMKPFSEFLGKRPWFAGDKLTYVDFLAYNVLDLYRIFDPKCLDEFPNL 622
KLKP YL+E+P ++K FS FLGK WFAG+KLT+VDFL Y++LD RIFDPKCLDEFPNL
Sbjct: 126 KLKPQYLEELPGQLKQFSMFLGKFSWFAGEKLTFVDFLTYDILDQNRIFDPKCLDEFPNL 185
Query: 623 KAFLSRFEGLERISAYMRSSRFLPHPVYTKMAMWGNK 733
KAF+ RFE LE+I+AY++S +F P+ KMA WGNK
Sbjct: 186 KAFMCRFEALEKIAAYLQSDQFCKMPINNKMAQWGNK 222
>ref|NP_671489.1| glutathione S-transferase Mu 4 isoform 2 [Homo sapiens].
Length = 195
Score = 336 bits (862), Expect = 2e-92
Identities = 156/189 (82%), Positives = 174/189 (92%)
Frame = +2
Query: 80 MTLILGYWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLSDKFKLGLDFPNL 259
M++ LGYWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWL++KFKLGLDFPNL
Sbjct: 1 MSMTLGYWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLNEKFKLGLDFPNL 60
Query: 260 PYLIDGAHKLTQSNAILRYIARKHNMCGETEEEKIRVDVLENQANDTSEALASLCYSPDF 439
PYLIDGAHK+TQSNAIL YIARKHN+CGETEEEKIRVD+LENQA D S LA +CYSPDF
Sbjct: 61 PYLIDGAHKITQSNAILCYIARKHNLCGETEEEKIRVDILENQAMDVSNQLARVCYSPDF 120
Query: 440 EKLKPGYLKEIPEKMKPFSEFLGKRPWFAGDKLTYVDFLAYNVLDLYRIFDPKCLDEFPN 619
EKLKP YL+E+P M+ FS+FLGKRPWF GDK+T+VDFLAY+VLDL+RIF+P CLD FPN
Sbjct: 121 EKLKPEYLEELPTMMQHFSQFLGKRPWFVGDKITFVDFLAYDVLDLHRIFEPNCLDAFPN 180
Query: 620 LKAFLSRFE 646
LK F+SRFE
Sbjct: 181 LKDFISRFE 189
>ref|NP_001135840.1| glutathione S-transferase Mu 2 isoform 2 [Homo sapiens].
Length = 191
Score = 311 bits (797), Expect = 7e-85
Identities = 141/189 (74%), Positives = 168/189 (88%)
Frame = +2
Query: 80 MTLILGYWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLSDKFKLGLDFPNL 259
M + LGYW+IRGLAH+IRLLLEYTDSSYEEKKYTMGDAPDYDRSQWL++KFKLGLDFPNL
Sbjct: 1 MPMTLGYWNIRGLAHSIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLNEKFKLGLDFPNL 60
Query: 260 PYLIDGAHKLTQSNAILRYIARKHNMCGETEEEKIRVDVLENQANDTSEALASLCYSPDF 439
PYLIDG HK+TQSNAILRYIARKHN+CGE+E+E+IR D+LENQ D+ LA LCY PDF
Sbjct: 61 PYLIDGTHKITQSNAILRYIARKHNLCGESEKEQIREDILENQFMDSRMQLAKLCYDPDF 120
Query: 440 EKLKPGYLKEIPEKMKPFSEFLGKRPWFAGDKLTYVDFLAYNVLDLYRIFDPKCLDEFPN 619
EKLKP YL+ +PE +K +S+FLGK+PWF GDK+T+VDF+AY+VL+ ++F+P CLD FPN
Sbjct: 121 EKLKPEYLQALPEMLKLYSQFLGKQPWFLGDKITFVDFIAYDVLERNQVFEPSCLDAFPN 180
Query: 620 LKAFLSRFE 646
LK F+SRFE
Sbjct: 181 LKDFISRFE 189
>ref|NP_666533.1| glutathione S-transferase Mu 1 isoform 2 [Homo sapiens].
Length = 181
Score = 305 bits (780), Expect = 7e-83
Identities = 149/218 (68%), Positives = 168/218 (77%)
Frame = +2
Query: 80 MTLILGYWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLSDKFKLGLDFPNL 259
M +ILGYWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWL++KFKLGLDFPNL
Sbjct: 1 MPMILGYWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLNEKFKLGLDFPNL 60
Query: 260 PYLIDGAHKLTQSNAILRYIARKHNMCGETEEEKIRVDVLENQANDTSEALASLCYSPDF 439
PYLIDGAHK+TQSNAIL YIARKHN+CGETEEEKIRVD+LENQ D L +CY+P+F
Sbjct: 61 PYLIDGAHKITQSNAILCYIARKHNLCGETEEEKIRVDILENQTMDNHMQLGMICYNPEF 120
Query: 440 EKLKPGYLKEIPEKMKPFSEFLGKRPWFAGDKLTYVDFLAYNVLDLYRIFDPKCLDEFPN 619
EKLKP YL+E+PEK+K +SEFLGKRPWFAG+K
Sbjct: 121 EKLKPKYLEELPEKLKLYSEFLGKRPWFAGNK---------------------------- 152
Query: 620 LKAFLSRFEGLERISAYMRSSRFLPHPVYTKMAMWGNK 733
GLE+ISAYM+SSRFLP PV++KMA+WGNK
Sbjct: 153 ---------GLEKISAYMKSSRFLPRPVFSKMAVWGNK 181
>ref|NP_000843.1| glutathione S-transferase P [Homo sapiens].
Length = 210
Score = 99.8 bits (247), Expect = 4e-21
Identities = 58/206 (28%), Positives = 104/206 (50%), Gaps = 4/206 (1%)
Frame = +2
Query: 98 YWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLSDKFKLGLDFPNLPYLIDG 277
Y+ +RG A+R+LL S++E+ T+ W K + LP DG
Sbjct: 8 YFPVRGRCAALRMLLADQGQSWKEEVVTV--------ETWQEGSLKASCLYGQLPKFQDG 59
Query: 278 AHKLTQSNAILRYIARKHNMCGETEEEKIRVDVLENQANDTSEALASLCYSPDFEKLKPG 457
L QSN ILR++ R + G+ ++E VD++ + D SL Y+ ++E K
Sbjct: 60 DLTLYQSNTILRHLGRTLGLYGKDQQEAALVDMVNDGVEDLRCKYISLIYT-NYEAGKDD 118
Query: 458 YLKEIPEKMKPFSEFL----GKRPWFAGDKLTYVDFLAYNVLDLYRIFDPKCLDEFPNLK 625
Y+K +P ++KPF L G + + GD++++ D+ ++L ++ + P CLD FP L
Sbjct: 119 YVKALPGQLKPFETLLSQNQGGKTFIVGDQISFADYNLLDLLLIHEVLAPGCLDAFPLLS 178
Query: 626 AFLSRFEGLERISAYMRSSRFLPHPV 703
A++ R ++ A++ S ++ P+
Sbjct: 179 AYVGRLSARPKLKAFLASPEYVNLPI 204
>ref|NP_055300.1| hematopoietic prostaglandin D synthase [Homo sapiens].
Length = 199
Score = 74.3 bits (181), Expect = 2e-13
Identities = 50/200 (25%), Positives = 87/200 (43%), Gaps = 5/200 (2%)
Frame = +2
Query: 92 LGYWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLSDKFKLGLDFPNLPYLI 271
L Y+++RG A IR + Y D YE+ + D P+ K L F +P L
Sbjct: 6 LTYFNMRGRAEIIRYIFAYLDIQYEDHRIEQADWPE----------IKSTLPFGKIPILE 55
Query: 272 DGAHKLTQSNAILRYIARKHNMCGETEEEKIRVDVLENQANDTSEALASLCYSPDFEKLK 451
L QS AI RY+ + ++ G TE E+ VD + + +D ++ ++ + +K
Sbjct: 56 VDGLTLHQSLAIARYLTKNTDLAGNTEMEQCHVDAIVDTLDD---FMSCFPWAEKKQDVK 112
Query: 452 PGYLKEI-----PEKMKPFSEFLGKRPWFAGDKLTYVDFLAYNVLDLYRIFDPKCLDEFP 616
E+ P M+ +LG R W G+ +T+ DF +F P LD P
Sbjct: 113 EQMFNELLTYNAPHLMQDLDTYLGGREWLIGNSVTWADFYWEICSTTLLVFKPDLLDNHP 172
Query: 617 NLKAFLSRFEGLERISAYMR 676
L + + + ++ +++
Sbjct: 173 RLVTLRKKVQAIPAVANWIK 192
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 51,332,747
Number of extensions: 1690069
Number of successful extensions: 7262
Number of sequences better than 1.0e-05: 14
Number of HSP's gapped: 7217
Number of HSP's successfully gapped: 15
Length of query: 381
Length of database: 18,297,164
Length adjustment: 104
Effective length of query: 277
Effective length of database: 14,868,908
Effective search space: 4118687516
Effective search space used: 4118687516
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002209
(1143 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_032209.1| glutathione S-transferase Mu 2 [Mus musculus]. 366 e-101
Alignment gi|NP_081040.1| glutathione S-transferase mu 4 isoform 1 [Mus m... 359 3e-99
Alignment gi|NP_034489.1| glutathione S-transferase Mu 3 [Mus musculus]. 357 7e-99
Alignment gi|NP_080948.2| glutathione S-transferase Mu 7 [Mus musculus]. 356 2e-98
Alignment gi|NP_034488.1| glutathione S-transferase Mu 1 [Mus musculus]. 356 2e-98
Alignment gi|NP_032210.3| glutathione S-transferase Mu 6 [Mus musculus]. 346 2e-95
Alignment gi|NP_034490.1| glutathione S-transferase Mu 5 [Mus musculus]. 326 2e-89
Alignment gi|NP_001153883.1| glutathione S-transferase mu 4 isoform 2 [Mu... 299 2e-81
Alignment gi|XP_136255.4| PREDICTED: glutathione S-transferase Mu 1-like ... 259 4e-69
Alignment gi|XP_920855.1| PREDICTED: glutathione S-transferase Mu 1-like ... 259 4e-69
>ref|NP_032209.1| glutathione S-transferase Mu 2 [Mus musculus].
Length = 218
Score = 366 bits (940), Expect = e-101
Identities = 169/218 (77%), Positives = 195/218 (89%)
Frame = +2
Query: 80 MTLILGYWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLSDKFKLGLDFPNL 259
M + LGYWDIRGLAHAIRLLLEYTD+SYE+KKYTMGDAPDYDRSQWLS+KFKLGLDFPNL
Sbjct: 1 MPMTLGYWDIRGLAHAIRLLLEYTDTSYEDKKYTMGDAPDYDRSQWLSEKFKLGLDFPNL 60
Query: 260 PYLIDGAHKLTQSNAILRYIARKHNMCGETEEEKIRVDVLENQANDTSEALASLCYSPDF 439
PYLIDG+HK+TQSNAILRY+ARKHN+CGETEEE+IRVD+LENQA DT LA +CYSPDF
Sbjct: 61 PYLIDGSHKITQSNAILRYLARKHNLCGETEEERIRVDILENQAMDTRIQLAMVCYSPDF 120
Query: 440 EKLKPGYLKEIPEKMKPFSEFLGKRPWFAGDKLTYVDFLAYNVLDLYRIFDPKCLDEFPN 619
EK KP YL+ +PEKMK +SEFLGK+PWFAG+K+TYVDFL Y+VLD +RIF+PKCLD FPN
Sbjct: 121 EKKKPEYLEGLPEKMKLYSEFLGKQPWFAGNKVTYVDFLVYDVLDQHRIFEPKCLDAFPN 180
Query: 620 LKAFLSRFEGLERISAYMRSSRFLPHPVYTKMAMWGNK 733
LK F+ RFEGL++IS YM+SSRFL P++ KMA W K
Sbjct: 181 LKDFMGRFEGLKKISDYMKSSRFLSKPIFAKMAFWNPK 218
>ref|NP_081040.1| glutathione S-transferase mu 4 isoform 1 [Mus musculus].
Length = 218
Score = 359 bits (921), Expect = 3e-99
Identities = 167/218 (76%), Positives = 195/218 (89%)
Frame = +2
Query: 80 MTLILGYWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLSDKFKLGLDFPNL 259
M + LGYWDIRGLAHAIRLLLEYT SSYEEK+YTMGDAPDYDRSQWLS+KFKLGLDFPNL
Sbjct: 1 MPMTLGYWDIRGLAHAIRLLLEYTGSSYEEKRYTMGDAPDYDRSQWLSEKFKLGLDFPNL 60
Query: 260 PYLIDGAHKLTQSNAILRYIARKHNMCGETEEEKIRVDVLENQANDTSEALASLCYSPDF 439
PYLIDG+HK+TQSNAILRYIARKHN+CGETEEEKIRVD+LENQA D S LA +CYSPDF
Sbjct: 61 PYLIDGSHKITQSNAILRYIARKHNLCGETEEEKIRVDILENQAMDVSNQLARVCYSPDF 120
Query: 440 EKLKPGYLKEIPEKMKPFSEFLGKRPWFAGDKLTYVDFLAYNVLDLYRIFDPKCLDEFPN 619
EKLK YL+++P +K FS+FLG+R WF G+K+T+VDFLAY++LDL+ IF+P CLD FPN
Sbjct: 121 EKLKVEYLEQLPGMVKLFSQFLGQRTWFVGEKITFVDFLAYDILDLHLIFEPTCLDAFPN 180
Query: 620 LKAFLSRFEGLERISAYMRSSRFLPHPVYTKMAMWGNK 733
LK F++RFE L+RISAYM++SRFL P+YTK+A WGNK
Sbjct: 181 LKDFVARFEVLKRISAYMKTSRFLRTPLYTKVATWGNK 218
>ref|NP_034489.1| glutathione S-transferase Mu 3 [Mus musculus].
Length = 218
Score = 357 bits (917), Expect = 7e-99
Identities = 164/216 (75%), Positives = 191/216 (88%)
Frame = +2
Query: 80 MTLILGYWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLSDKFKLGLDFPNL 259
M + LGYW+ RGL H+IRLLLEYTDSSYEEK+Y MGDAP++DRSQWLS+KF LGLDFPNL
Sbjct: 1 MPMTLGYWNTRGLTHSIRLLLEYTDSSYEEKRYVMGDAPNFDRSQWLSEKFNLGLDFPNL 60
Query: 260 PYLIDGAHKLTQSNAILRYIARKHNMCGETEEEKIRVDVLENQANDTSEALASLCYSPDF 439
PYLIDG+HK+TQSNAILRY+ RKHN+CGETEEE+IRVD LENQ DT L +C SPDF
Sbjct: 61 PYLIDGSHKVTQSNAILRYLGRKHNLCGETEEERIRVDTLENQVMDTRIQLMIVCCSPDF 120
Query: 440 EKLKPGYLKEIPEKMKPFSEFLGKRPWFAGDKLTYVDFLAYNVLDLYRIFDPKCLDEFPN 619
EK KP +LK IPEKMK +SEFLGKRPWFAGDK+TYVDFLAY++LD YR+F+PKCLD FPN
Sbjct: 121 EKQKPEFLKAIPEKMKLYSEFLGKRPWFAGDKVTYVDFLAYDILDQYRMFEPKCLDAFPN 180
Query: 620 LKAFLSRFEGLERISAYMRSSRFLPHPVYTKMAMWG 727
L+ FL+RFEGL++ISAYM+SSRFLP PV+TK+A WG
Sbjct: 181 LRDFLARFEGLKKISAYMKSSRFLPRPVFTKIAQWG 216
>ref|NP_080948.2| glutathione S-transferase Mu 7 [Mus musculus].
Length = 218
Score = 356 bits (914), Expect = 2e-98
Identities = 160/217 (73%), Positives = 194/217 (89%)
Frame = +2
Query: 80 MTLILGYWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLSDKFKLGLDFPNL 259
M + LGYWDIRGLAHAIRL LEYTDSSYEEK+YTMGDAPDYD+SQWL++KFKLGLDFPNL
Sbjct: 1 MPMTLGYWDIRGLAHAIRLFLEYTDSSYEEKRYTMGDAPDYDQSQWLNEKFKLGLDFPNL 60
Query: 260 PYLIDGAHKLTQSNAILRYIARKHNMCGETEEEKIRVDVLENQANDTSEALASLCYSPDF 439
PYLIDG+HK+TQSNAILRY+ RKHN+CGETEEE+IRVD+LENQ D LA LCY+ DF
Sbjct: 61 PYLIDGSHKITQSNAILRYLGRKHNLCGETEEERIRVDILENQLMDNRMVLARLCYNADF 120
Query: 440 EKLKPGYLKEIPEKMKPFSEFLGKRPWFAGDKLTYVDFLAYNVLDLYRIFDPKCLDEFPN 619
EKLKPGYL+++P M+ +SEFLGKRPWFAGDK+T+VDF+AY+VL+ ++F+ KCLD FPN
Sbjct: 121 EKLKPGYLEQLPGMMRLYSEFLGKRPWFAGDKITFVDFIAYDVLERNQVFEAKCLDAFPN 180
Query: 620 LKAFLSRFEGLERISAYMRSSRFLPHPVYTKMAMWGN 730
LK F++RFEGL++IS YM++SRFLP P++TKMA WG+
Sbjct: 181 LKDFIARFEGLKKISDYMKTSRFLPRPMFTKMATWGS 217
>ref|NP_034488.1| glutathione S-transferase Mu 1 [Mus musculus].
Length = 218
Score = 356 bits (913), Expect = 2e-98
Identities = 160/218 (73%), Positives = 195/218 (89%)
Frame = +2
Query: 80 MTLILGYWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLSDKFKLGLDFPNL 259
M +ILGYW++RGL H IR+LLEYTDSSY+EK+YTMGDAPD+DRSQWL++KFKLGLDFPNL
Sbjct: 1 MPMILGYWNVRGLTHPIRMLLEYTDSSYDEKRYTMGDAPDFDRSQWLNEKFKLGLDFPNL 60
Query: 260 PYLIDGAHKLTQSNAILRYIARKHNMCGETEEEKIRVDVLENQANDTSEALASLCYSPDF 439
PYLIDG+HK+TQSNAILRY+ARKH++ GETEEE+IR D++ENQ DT L LCY+PDF
Sbjct: 61 PYLIDGSHKITQSNAILRYLARKHHLDGETEEERIRADIVENQVMDTRMQLIMLCYNPDF 120
Query: 440 EKLKPGYLKEIPEKMKPFSEFLGKRPWFAGDKLTYVDFLAYNVLDLYRIFDPKCLDEFPN 619
EK KP +LK IPEKMK +SEFLGKRPWFAGDK+TYVDFLAY++LD YR+F+PKCLD FPN
Sbjct: 121 EKQKPEFLKTIPEKMKLYSEFLGKRPWFAGDKVTYVDFLAYDILDQYRMFEPKCLDAFPN 180
Query: 620 LKAFLSRFEGLERISAYMRSSRFLPHPVYTKMAMWGNK 733
L+ FL+RFEGL++ISAYM+SSR++ P+++KMA W NK
Sbjct: 181 LRDFLARFEGLKKISAYMKSSRYIATPIFSKMAHWSNK 218
>ref|NP_032210.3| glutathione S-transferase Mu 6 [Mus musculus].
Length = 218
Score = 346 bits (888), Expect = 2e-95
Identities = 156/218 (71%), Positives = 187/218 (85%)
Frame = +2
Query: 80 MTLILGYWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLSDKFKLGLDFPNL 259
M + LGYWDIRGL HAIRLLLEYT++ YEEK+Y MGDAPDYDRSQWL+DKFKL LDFPNL
Sbjct: 1 MPVTLGYWDIRGLGHAIRLLLEYTETGYEEKRYAMGDAPDYDRSQWLNDKFKLDLDFPNL 60
Query: 260 PYLIDGAHKLTQSNAILRYIARKHNMCGETEEEKIRVDVLENQANDTSEALASLCYSPDF 439
PYLIDG+HK+TQSNAILRY+ RKHN+CGETEEE+IRVD+LE Q DT + LCYS DF
Sbjct: 61 PYLIDGSHKVTQSNAILRYLGRKHNLCGETEEERIRVDILEKQVMDTRIQMGMLCYSADF 120
Query: 440 EKLKPGYLKEIPEKMKPFSEFLGKRPWFAGDKLTYVDFLAYNVLDLYRIFDPKCLDEFPN 619
EK KP +LK +P+++K +SEFLGK+PWFAGDK+T+ DFL Y+VLD +R+F+P CLD FPN
Sbjct: 121 EKRKPEFLKGLPDQLKLYSEFLGKQPWFAGDKITFADFLVYDVLDQHRMFEPTCLDAFPN 180
Query: 620 LKAFLSRFEGLERISAYMRSSRFLPHPVYTKMAMWGNK 733
LK F++RFEGL +ISAYM++SRFLP PVY K A WGN+
Sbjct: 181 LKDFMARFEGLRKISAYMKTSRFLPSPVYLKQATWGNE 218
>ref|NP_034490.1| glutathione S-transferase Mu 5 [Mus musculus].
Length = 224
Score = 326 bits (836), Expect = 2e-89
Identities = 150/220 (68%), Positives = 184/220 (83%)
Frame = +2
Query: 74 NTMTLILGYWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLSDKFKLGLDFP 253
++ +++LGYWDIRGLAHAIR+LLE+TD+SYEEK+Y G+APDYDRSQWL KFKL LDFP
Sbjct: 2 SSKSMVLGYWDIRGLAHAIRMLLEFTDTSYEEKRYICGEAPDYDRSQWLDVKFKLDLDFP 61
Query: 254 NLPYLIDGAHKLTQSNAILRYIARKHNMCGETEEEKIRVDVLENQANDTSEALASLCYSP 433
NLPYL+DG +K+TQSNAILRYIARKHNMCG+TEEEKIRVD++ENQ D L LCY+
Sbjct: 62 NLPYLMDGKNKITQSNAILRYIARKHNMCGDTEEEKIRVDIMENQIMDFRMQLVRLCYNS 121
Query: 434 DFEKLKPGYLKEIPEKMKPFSEFLGKRPWFAGDKLTYVDFLAYNVLDLYRIFDPKCLDEF 613
+ E LKP YL+++P ++K FS FLGK WFAG+KLT+VDFL Y+VLD RIF+PKCLDEF
Sbjct: 122 NHENLKPQYLEQLPAQLKQFSLFLGKFTWFAGEKLTFVDFLTYDVLDQNRIFEPKCLDEF 181
Query: 614 PNLKAFLSRFEGLERISAYMRSSRFLPHPVYTKMAMWGNK 733
PNLKAF+ RFE LE+I+A+++S RF P+ KMA WGNK
Sbjct: 182 PNLKAFMCRFEALEKIAAFLQSDRFFKMPINNKMAKWGNK 221
>ref|NP_001153883.1| glutathione S-transferase mu 4 isoform 2 [Mus musculus].
Length = 184
Score = 299 bits (766), Expect = 2e-81
Identities = 138/184 (75%), Positives = 164/184 (89%)
Frame = +2
Query: 182 MGDAPDYDRSQWLSDKFKLGLDFPNLPYLIDGAHKLTQSNAILRYIARKHNMCGETEEEK 361
MGDAPDYDRSQWLS+KFKLGLDFPNLPYLIDG+HK+TQSNAILRYIARKHN+CGETEEEK
Sbjct: 1 MGDAPDYDRSQWLSEKFKLGLDFPNLPYLIDGSHKITQSNAILRYIARKHNLCGETEEEK 60
Query: 362 IRVDVLENQANDTSEALASLCYSPDFEKLKPGYLKEIPEKMKPFSEFLGKRPWFAGDKLT 541
IRVD+LENQA D S LA +CYSPDFEKLK YL+++P +K FS+FLG+R WF G+K+T
Sbjct: 61 IRVDILENQAMDVSNQLARVCYSPDFEKLKVEYLEQLPGMVKLFSQFLGQRTWFVGEKIT 120
Query: 542 YVDFLAYNVLDLYRIFDPKCLDEFPNLKAFLSRFEGLERISAYMRSSRFLPHPVYTKMAM 721
+VDFLAY++LDL+ IF+P CLD FPNLK F++RFE L+RISAYM++SRFL P+YTK+A
Sbjct: 121 FVDFLAYDILDLHLIFEPTCLDAFPNLKDFVARFEVLKRISAYMKTSRFLRTPLYTKVAT 180
Query: 722 WGNK 733
WGNK
Sbjct: 181 WGNK 184
>ref|XP_136255.4| PREDICTED: glutathione S-transferase Mu 1-like [Mus musculus].
Length = 196
Score = 259 bits (661), Expect = 4e-69
Identities = 130/204 (63%), Positives = 159/204 (77%)
Frame = +2
Query: 80 MTLILGYWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLSDKFKLGLDFPNL 259
M + L YWDI GLAHAI LLLEYTDS YEEK+YTM D P YDRSQWLS+ FKLGL+F NL
Sbjct: 1 MPMTLCYWDIHGLAHAIWLLLEYTDSCYEEKRYTMRDPPKYDRSQWLSE-FKLGLEFFNL 59
Query: 260 PYLIDGAHKLTQSNAILRYIARKHNMCGETEEEKIRVDVLENQANDTSEALASLCYSPDF 439
PYLIDG+HK+TQSNAILRY ARK+N+CGETEE K RV++L+NQ D S L +CYSPDF
Sbjct: 60 PYLIDGSHKITQSNAILRYTARKNNLCGETEE-KSRVEILKNQVMDVSSQLGRVCYSPDF 118
Query: 440 EKLKPGYLKEIPEKMKPFSEFLGKRPWFAGDKLTYVDFLAYNVLDLYRIFDPKCLDEFPN 619
EKLK YL ++ S+FLGKR WF +K+T+VDFLAY++LD + IF+P CLD F N
Sbjct: 119 EKLKAEYLVQLS------SQFLGKRTWFVSEKITFVDFLAYDILDRHLIFEPTCLDAFLN 172
Query: 620 LKAFLSRFEGLERISAYMRSSRFL 691
LK F++ E L+++S YM++S FL
Sbjct: 173 LKDFVACVEELKKMSDYMKTSYFL 196
>ref|XP_920855.1| PREDICTED: glutathione S-transferase Mu 1-like [Mus musculus].
Length = 196
Score = 259 bits (661), Expect = 4e-69
Identities = 130/204 (63%), Positives = 159/204 (77%)
Frame = +2
Query: 80 MTLILGYWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLSDKFKLGLDFPNL 259
M + L YWDI GLAHAI LLLEYTDS YEEK+YTM D P YDRSQWLS+ FKLGL+F NL
Sbjct: 1 MPMTLCYWDIHGLAHAIWLLLEYTDSCYEEKRYTMRDPPKYDRSQWLSE-FKLGLEFFNL 59
Query: 260 PYLIDGAHKLTQSNAILRYIARKHNMCGETEEEKIRVDVLENQANDTSEALASLCYSPDF 439
PYLIDG+HK+TQSNAILRY ARK+N+CGETEE K RV++L+NQ D S L +CYSPDF
Sbjct: 60 PYLIDGSHKITQSNAILRYTARKNNLCGETEE-KSRVEILKNQVMDVSSQLGRVCYSPDF 118
Query: 440 EKLKPGYLKEIPEKMKPFSEFLGKRPWFAGDKLTYVDFLAYNVLDLYRIFDPKCLDEFPN 619
EKLK YL ++ S+FLGKR WF +K+T+VDFLAY++LD + IF+P CLD F N
Sbjct: 119 EKLKAEYLVQLS------SQFLGKRTWFVSEKITFVDFLAYDILDRHLIFEPTCLDAFLN 172
Query: 620 LKAFLSRFEGLERISAYMRSSRFL 691
LK F++ E L+++S YM++S FL
Sbjct: 173 LKDFVACVEELKKMSDYMKTSYFL 196
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 43,232,392
Number of extensions: 1397816
Number of successful extensions: 6062
Number of sequences better than 1.0e-05: 23
Number of HSP's gapped: 5989
Number of HSP's successfully gapped: 23
Length of query: 381
Length of database: 15,617,559
Length adjustment: 103
Effective length of query: 278
Effective length of database: 12,523,851
Effective search space: 3481630578
Effective search space used: 3481630578
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002209
(1143 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001072152.1| glutathione S-transferase mu 2 [Sus scrofa]. 432 e-121
Alignment gi|XP_001924094.2| PREDICTED: glutathione S-transferase Mu 1-li... 365 e-101
Alignment gi|XP_003125913.1| PREDICTED: glutathione S-transferase Mu 5-li... 340 1e-93
Alignment gi|XP_003122501.1| PREDICTED: glutathione S-transferase P 1-lik... 96 5e-20
Alignment gi|XP_003357127.1| PREDICTED: hematopoietic prostaglandin D syn... 75 7e-14
Alignment gi|XP_003128840.1| PREDICTED: glutathione S-transferase A1-like... 69 4e-12
Alignment gi|NP_999554.1| glutathione S-transferase alpha M14 [Sus scrofa]. 64 2e-10
Alignment gi|NP_999015.1| glutathione S-transferase A2 [Sus scrofa]. 64 2e-10
Alignment gi|XP_003128841.1| PREDICTED: glutathione S-transferase A4-like... 61 1e-09
Alignment gi|XP_003356871.1| PREDICTED: glutathione S-transferase A4-like... 61 1e-09
>ref|NP_001072152.1| glutathione S-transferase mu 2 [Sus scrofa].
Length = 218
Score = 432 bits (1112), Expect = e-121
Identities = 205/218 (94%), Positives = 212/218 (97%)
Frame = +2
Query: 80 MTLILGYWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLSDKFKLGLDFPNL 259
MT+ILGYWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLSDKFKLGLDFPNL
Sbjct: 1 MTMILGYWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLSDKFKLGLDFPNL 60
Query: 260 PYLIDGAHKLTQSNAILRYIARKHNMCGETEEEKIRVDVLENQANDTSEALASLCYSPDF 439
PYLIDGAHKLTQSNAILRYIARKHNMCGETEEEKIR+D+LENQA D +A +CYSPDF
Sbjct: 61 PYLIDGAHKLTQSNAILRYIARKHNMCGETEEEKIRMDILENQAMDVRLQMARICYSPDF 120
Query: 440 EKLKPGYLKEIPEKMKPFSEFLGKRPWFAGDKLTYVDFLAYNVLDLYRIFDPKCLDEFPN 619
EKLKPGYLKEIPEKMKPFSEFLGKRPWFAGDKLTYVDFLAY+VLDLYRIFDPKCLDEFPN
Sbjct: 121 EKLKPGYLKEIPEKMKPFSEFLGKRPWFAGDKLTYVDFLAYDVLDLYRIFDPKCLDEFPN 180
Query: 620 LKAFLSRFEGLERISAYMRSSRFLPHPVYTKMAMWGNK 733
LKAFLSRFEGLERISAYMRSSRFLPHPVY+KMAMWGNK
Sbjct: 181 LKAFLSRFEGLERISAYMRSSRFLPHPVYSKMAMWGNK 218
>ref|XP_001924094.2| PREDICTED: glutathione S-transferase Mu 1-like [Sus scrofa].
Length = 389
Score = 365 bits (936), Expect = e-101
Identities = 169/223 (75%), Positives = 197/223 (88%)
Frame = +2
Query: 65 SETNTMTLILGYWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLSDKFKLGL 244
+E +T + LGYWDIRGLAHAIRLLLEYT S+YEE+KY MGD PDYDRSQWL+++ KLGL
Sbjct: 167 TEPSTTAITLGYWDIRGLAHAIRLLLEYTGSNYEERKYMMGDPPDYDRSQWLNERSKLGL 226
Query: 245 DFPNLPYLIDGAHKLTQSNAILRYIARKHNMCGETEEEKIRVDVLENQANDTSEALASLC 424
DFPNLPYLIDG HKLTQSNAILRYIARKHNMCGETE+EKI+VD+LE+Q D +A +C
Sbjct: 227 DFPNLPYLIDGPHKLTQSNAILRYIARKHNMCGETEKEKIQVDILESQVMDVRLHMARVC 286
Query: 425 YSPDFEKLKPGYLKEIPEKMKPFSEFLGKRPWFAGDKLTYVDFLAYNVLDLYRIFDPKCL 604
YS DFEKLKPGY+ EIPEKM+ FS FLGK PWFAG LTYVDFLAY++LDL+RIF+PKCL
Sbjct: 287 YSSDFEKLKPGYVDEIPEKMRLFSAFLGKGPWFAGHTLTYVDFLAYDILDLHRIFEPKCL 346
Query: 605 DEFPNLKAFLSRFEGLERISAYMRSSRFLPHPVYTKMAMWGNK 733
DEFPNLK F++RFEGL++ISAYM+SSRFLP P++ K+AMWGNK
Sbjct: 347 DEFPNLKDFITRFEGLKKISAYMKSSRFLPRPLFLKIAMWGNK 389
>ref|XP_003125913.1| PREDICTED: glutathione S-transferase Mu 5-like [Sus scrofa].
Length = 225
Score = 340 bits (871), Expect = 1e-93
Identities = 158/220 (71%), Positives = 187/220 (85%)
Frame = +2
Query: 74 NTMTLILGYWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLSDKFKLGLDFP 253
+T +++LGYWDIRGLAHAIR+LLE+TD+SYEEK+Y G+APDYDRSQWL K+KL LDFP
Sbjct: 3 STKSMVLGYWDIRGLAHAIRMLLEFTDTSYEEKRYICGEAPDYDRSQWLDVKYKLDLDFP 62
Query: 254 NLPYLIDGAHKLTQSNAILRYIARKHNMCGETEEEKIRVDVLENQANDTSEALASLCYSP 433
NLPYL+DG +KLTQSNAILRYIARKHNMCGETEEEKIRVD++ENQ D L LCYSP
Sbjct: 63 NLPYLMDGKNKLTQSNAILRYIARKHNMCGETEEEKIRVDIMENQIMDFRMQLIRLCYSP 122
Query: 434 DFEKLKPGYLKEIPEKMKPFSEFLGKRPWFAGDKLTYVDFLAYNVLDLYRIFDPKCLDEF 613
D EKLKP YL+++P ++K FS FLGK WFAG+KLT+VDFL Y+VLD RIF+P+CLDEF
Sbjct: 123 DHEKLKPQYLEQLPGQLKQFSLFLGKYSWFAGEKLTFVDFLTYDVLDQNRIFEPRCLDEF 182
Query: 614 PNLKAFLSRFEGLERISAYMRSSRFLPHPVYTKMAMWGNK 733
PNLKAF+ RFE LE+I+AYM+S RFL P+ KMA WGNK
Sbjct: 183 PNLKAFMCRFEALEKIAAYMQSDRFLKMPINNKMAQWGNK 222
>ref|XP_003122501.1| PREDICTED: glutathione S-transferase P 1-like [Sus scrofa].
Length = 239
Score = 95.5 bits (236), Expect = 5e-20
Identities = 66/227 (29%), Positives = 112/227 (49%), Gaps = 10/227 (4%)
Frame = +2
Query: 56 GQGSETNTMTLILGYWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLSDKFK 235
G G + T++ Y+ RG A+R+LL S++E+ T + WL K
Sbjct: 25 GAGGTVPSYTIV--YFPARGRCEAMRMLLADQGQSWKEEVVT--------KETWLQGPLK 74
Query: 236 LGLDFPNLPYLIDGAHKLTQSNAILRYIARKHNMCGETEEEKIRVDVLENQANDTSEALA 415
+ LP DG L QSNAILR++ R + G+ E +D++ ND E L
Sbjct: 75 ATCLYGQLPKFQDGDLTLYQSNAILRHLGRSLGLYGKDLREAALLDMV----NDGVEDLR 130
Query: 416 SLC---YSPDFEKLKPGYLKEIPEKMKPFSEFL----GKRPWFAGDKLTYVDFLAYNVLD 574
LC ++E+ K Y++E+P ++PF L G + + G ++++ D YN+LD
Sbjct: 131 RLCSHLIRHNYEEDKARYVEELPGHLRPFETLLSQNQGGQAFIVGSQISFAD---YNLLD 187
Query: 575 L---YRIFDPKCLDEFPNLKAFLSRFEGLERISAYMRSSRFLPHPVY 706
L +++ P CLD FP L A+++R ++ A++ S + P++
Sbjct: 188 LLLSHQVLVPSCLDAFPLLSAYVARLSARPKLKAFLASPEHVNRPIF 234
>ref|XP_003357127.1| PREDICTED: hematopoietic prostaglandin D synthase-like [Sus
scrofa].
Length = 199
Score = 75.1 bits (183), Expect = 7e-14
Identities = 52/201 (25%), Positives = 96/201 (47%), Gaps = 6/201 (2%)
Frame = +2
Query: 92 LGYWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLSDKFKLGLDFPNLPYL- 268
L Y+++RG A IR + Y D YE+ + D P + K L F +P L
Sbjct: 6 LTYFNMRGRAEIIRYIFAYLDIKYEDHRIEQADWP----------QIKPTLPFGKIPILE 55
Query: 269 IDGAHKLTQSNAILRYIARKHNMCGETEEEKIRVDVLENQANDTSEALASLCYSPDFEKL 448
+DG + L QS AI RY+A+ ++ G+T+ E+ +VD + + +D ++ ++ + +
Sbjct: 56 VDGLN-LHQSLAIARYLAKNTDLAGKTDLEQCQVDAIVDTLDD---FMSCFPWAEKKQDV 111
Query: 449 KPGYLKEI-----PEKMKPFSEFLGKRPWFAGDKLTYVDFLAYNVLDLYRIFDPKCLDEF 613
K E+ P ++ +LG++ WF G+ +T+ DF +F P LD
Sbjct: 112 KDQIFNELLTCEAPHLLQDLDTYLGEKEWFIGNSVTWADFYWEICSTTLLVFKPDLLDIH 171
Query: 614 PNLKAFLSRFEGLERISAYMR 676
P L + + + I+ +++
Sbjct: 172 PRLVTLRKKVQSIPAIANWIQ 192
>ref|XP_003128840.1| PREDICTED: glutathione S-transferase A1-like [Sus scrofa].
Length = 223
Score = 69.3 bits (168), Expect = 4e-12
Identities = 62/204 (30%), Positives = 88/204 (43%), Gaps = 9/204 (4%)
Frame = +2
Query: 92 LGYWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLSDKFKLGLD----FPNL 259
L Y+D RG A IR LL +EEK L D KL D F +
Sbjct: 7 LHYFDGRGRAEVIRWLLASAGVEFEEKFVDT-----------LEDLEKLRNDGSLMFQQV 55
Query: 260 PYLIDGAHKLTQSNAILRYIARKHNMCGETEEEKIRVDVLENQANDTSEALASLCYSPDF 439
P + KL Q+ AIL YIA K+++CG+ +E+ VD+ D E + L P
Sbjct: 56 PMIEIDGMKLVQTRAILNYIATKYDLCGKDIKERAAVDMYTEGIADIGEMIMLLPICPPD 115
Query: 440 EK-LKPGYLKE-IPEKMKPFSEFLGK---RPWFAGDKLTYVDFLAYNVLDLYRIFDPKCL 604
EK K +KE + P E + K + + G+KL+ D +L DP L
Sbjct: 116 EKDAKMALIKERVSNHYLPAFEKVLKSHGQDYLVGNKLSRADIQLVELLYYVEELDPSLL 175
Query: 605 DEFPNLKAFLSRFEGLERISAYMR 676
FP LKA +R L + +++
Sbjct: 176 ANFPLLKALKTRVSNLPTVKKFLQ 199
>ref|NP_999554.1| glutathione S-transferase alpha M14 [Sus scrofa].
Length = 222
Score = 63.5 bits (153), Expect = 2e-10
Identities = 58/201 (28%), Positives = 88/201 (43%), Gaps = 5/201 (2%)
Frame = +2
Query: 89 ILGYWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLSDKFKLGLDFPNLPYL 268
IL Y++ RG IR LL +EEK + D + +D L F +P +
Sbjct: 6 ILHYFNGRGRMECIRWLLAAAGVEFEEKFIKTPE----DLDKLTNDGSLL---FQQVPMV 58
Query: 269 IDGAHKLTQSNAILRYIARKHNMCGETEEEKIRVDVLENQANDTSEALASLCYSPDFEK- 445
KL Q+ AIL YIA K+N+ G+ +E+ +D+ D E + L P EK
Sbjct: 59 EIDGMKLVQTRAILNYIATKYNLYGKDAKERALIDMYTEGVADLGEMILLLPLCPPNEKD 118
Query: 446 LKPGYLKE-IPEKMKPFSEFLGK---RPWFAGDKLTYVDFLAYNVLDLYRIFDPKCLDEF 613
K +KE + P E + K + + G+KL+ D +L DP L F
Sbjct: 119 AKVASIKEKSTNRYLPAFEKVLKSHGQDYLVGNKLSRADIQLVELLYYVEELDPSLLANF 178
Query: 614 PNLKAFLSRFEGLERISAYMR 676
P LKA +R L + +++
Sbjct: 179 PLLKALKTRVSNLPTVKKFLQ 199
>ref|NP_999015.1| glutathione S-transferase A2 [Sus scrofa].
Length = 223
Score = 63.5 bits (153), Expect = 2e-10
Identities = 59/201 (29%), Positives = 91/201 (45%), Gaps = 5/201 (2%)
Frame = +2
Query: 89 ILGYWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLSDKFKLGLDFPNLPYL 268
IL Y++ RG IR LL +EEK + P+ D ++ +D L F +P +
Sbjct: 6 ILHYFNGRGRMECIRWLLAAAGVEFEEKFI---ENPN-DLNKLTNDGSLL---FQQVPMV 58
Query: 269 IDGAHKLTQSNAILRYIARKHNMCGETEEEKIRVDVLENQANDTSEALASLCYSPDFEK- 445
KL Q+ AIL YIA K+N+ G+ +E+ +D+ D E + L P EK
Sbjct: 59 EIDGMKLVQTRAILNYIATKYNLYGKDAKERALIDMYTEGVADLGEMILLLPLCPPNEKD 118
Query: 446 LKPGYLKE-IPEKMKPFSEFLGK---RPWFAGDKLTYVDFLAYNVLDLYRIFDPKCLDEF 613
K +KE + P E + K + + G+KL+ D +L DP L F
Sbjct: 119 AKVASIKEKSTNRYLPAFEKVLKSHGQDYLVGNKLSRADIQLVELLYYVEELDPSLLANF 178
Query: 614 PNLKAFLSRFEGLERISAYMR 676
P LKA +R L + +++
Sbjct: 179 PLLKALKTRVSNLPTVKKFLQ 199
>ref|XP_003128841.1| PREDICTED: glutathione S-transferase A4-like [Sus scrofa].
Length = 222
Score = 60.8 bits (146), Expect = 1e-09
Identities = 54/202 (26%), Positives = 91/202 (45%), Gaps = 7/202 (3%)
Frame = +2
Query: 92 LGYWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLSDKFKLGLDFPNLPYLI 271
L Y+ RG +IR LL +EE+ + R Q+ K L F +P +
Sbjct: 7 LYYFRGRGRMESIRWLLAAAGVEFEEEFFET-------REQYEKLKKDGLLLFGQVPLVE 59
Query: 272 DGAHKLTQSNAILRYIARKHNMCGETEEEKIRVDVLENQANDTSEALASLCYSPDFEKLK 451
LTQ+ AIL Y+A K+N+ G+ +E++R+D+ + D +A + P EK +
Sbjct: 60 IDGMALTQTRAILSYLAAKYNLHGKDLKERVRIDMYADGTLDLMMMVALAAFKPPGEKEE 119
Query: 452 PGYLKEIPEKMK----PFSEFLGK---RPWFAGDKLTYVDFLAYNVLDLYRIFDPKCLDE 610
L + EK K P E + K + G+K ++ D + + D L +
Sbjct: 120 --NLALVVEKAKTRYFPVFEKILKDQGEDFLVGNKFSWADIQLLEAILMMEELDASVLSD 177
Query: 611 FPNLKAFLSRFEGLERISAYMR 676
FP L+AF +R + I +++
Sbjct: 178 FPLLQAFKTRISNIPTIKKFLQ 199
>ref|XP_003356871.1| PREDICTED: glutathione S-transferase A4-like [Sus scrofa].
Length = 222
Score = 60.8 bits (146), Expect = 1e-09
Identities = 54/202 (26%), Positives = 91/202 (45%), Gaps = 7/202 (3%)
Frame = +2
Query: 92 LGYWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLSDKFKLGLDFPNLPYLI 271
L Y+ RG +IR LL +EE+ + R Q+ K L F +P +
Sbjct: 7 LYYFRGRGRMESIRWLLAAAGVEFEEEFFET-------REQYEKLKKDGLLLFGQVPLVE 59
Query: 272 DGAHKLTQSNAILRYIARKHNMCGETEEEKIRVDVLENQANDTSEALASLCYSPDFEKLK 451
LTQ+ AIL Y+A K+N+ G+ +E++R+D+ + D +A + P EK +
Sbjct: 60 IDGMALTQTRAILSYLAAKYNLHGKDLKERVRIDMYADGTLDLMMMVALAAFKPPGEKEE 119
Query: 452 PGYLKEIPEKMK----PFSEFLGK---RPWFAGDKLTYVDFLAYNVLDLYRIFDPKCLDE 610
L + EK K P E + K + G+K ++ D + + D L +
Sbjct: 120 --NLALVVEKAKTRYFPVFEKILKDQGEDFLVGNKFSWADIQLLEAILMMEELDASVLSD 177
Query: 611 FPNLKAFLSRFEGLERISAYMR 676
FP L+AF +R + I +++
Sbjct: 178 FPLLQAFKTRISNIPTIKKFLQ 199
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 32,455,982
Number of extensions: 1081897
Number of successful extensions: 4900
Number of sequences better than 1.0e-05: 10
Number of HSP's gapped: 4871
Number of HSP's successfully gapped: 10
Length of query: 381
Length of database: 11,343,932
Length adjustment: 101
Effective length of query: 280
Effective length of database: 8,829,335
Effective search space: 2472213800
Effective search space used: 2472213800
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002209
(1143 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr01 777 0.0
Sscrofa_Chr13 535 e-149
Sscrofa_Chr04 155 6e-35
gb|GL896251.1| Sus scrofa unplaced genomic scaffold chrU_scaffold61 153 3e-34
>Sscrofa_Chr01
|| Length = 315321322
Score = 777 bits (392), Expect = 0.0
Identities = 474/500 (94%), Gaps = 1/500 (0%)
Strand = Plus / Plus
Query: 645 agggcctggagaggatctcagcctacatgaggtccagccgcttcctgccacaccccgtgt 704
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69719648 agggcctggagaggatctcagcctacatgaggtccagccgcttcctgccacaccccgtgt 69719707
Query: 705 atacaaagatggccatgtggggcaacaagtagtgccctg-aagcaggagatggagtgagg 763
|||||||| |||||| ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 69719708 atacaaaggtggccacgtggggcaacaagtagtgccctggaagcaggagatggagtgagg 69719767
Query: 764 agcaggccctggaggacagctggccctccctgcagcccacgaccagacgtcttgcttgtc 823
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69719768 agcagaccctggaggacagctggccctccctgcagcccacgaccagacgtcttgcttgtc 69719827
Query: 824 ctccttgttcccatcaggcctcacgtggcccctaagcctttcccaggccgcattcaccag 883
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 69719828 ctccttgttcccatcaggcctcacgtggcccctaagcctttcccaggcagcattcaccag 69719887
Query: 884 gatcttgagcgctctgcagcctcccgcccttctgccgtgaagtcagcagctgaaggtatg 943
||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 69719888 gatcttgagcgctctgcagcctcccgcccttctgctgtgaagtcagcggctgaaggtatc 69719947
Query: 944 ctttctgctctgagggccaccagacccgccttcctttctgttcctgctcctgctgtgagc 1003
||||||||||||||| | ||||||||||||||||||||||| | ||||||||||||||||
Sbjct: 69719948 ctttctgctctgaggccaaccagacccgccttcctttctgtgcttgctcctgctgtgagc 69720007
Query: 1004 agcctgacctggagagctcaggcctgacatgtgaagcctggccgttgcctgtggggctca 1063
|||||||||||||| ||||||||||||| |||| ||||||||| ||||||||||||||||
Sbjct: 69720008 agcctgacctggagggctcaggcctgacgtgtggagcctggcccttgcctgtggggctca 69720067
Query: 1064 atcctgagctgcccagccctgccttgaagaacagccctgaaccagcgtggaggccctggt 1123
|||||||||||||||||||||| |||||| ||||||||| || ||||| |||||||| |
Sbjct: 69720068 gtcctgagctgcccagccctgccctgaagaccagccctgacccggcgtgtaggccctgct 69720127
Query: 1124 ctcccagggtggtccccacc 1143
||||| ||||||||||||
Sbjct: 69720128 tccccagcgtggtccccacc 69720147
>Sscrofa_Chr13
|| Length = 218635234
Score = 535 bits (270), Expect = e-149
Identities = 603/710 (84%), Gaps = 3/710 (0%)
Strand = Plus / Minus
Query: 91 cctgggttactgggacatccgtgggctggcccacgccatccgcctgctcctggagtacac 150
||||||||||||||||||||| |||||||| ||||||||||||||||||||||| |||||
Sbjct: 161088592 cctgggttactgggacatccgcgggctggctcacgccatccgcctgctcctggaatacac 161088533
Query: 151 agactccagctacgaggagaagaagtacacgatgggggacgctcctgactatgacagaag 210
|| || | || ||||||| ||| |||| |||||| || |||||||||||||||||||
Sbjct: 161088532 aggttcaaattatgaggagaggaaatacatgatgggagatcctcctgactatgacagaag 161088473
Query: 211 ccagtggctgagtgacaaattcaagctggggctggacttccccaatctgccctacttaat 270
||||||| ||| ||| | || ||||||||| ||||||||||||||| |||||||||||||
Sbjct: 161088472 ccagtggttgaatgaaagatccaagctgggcctggacttccccaatttgccctacttaat 161088413
Query: 271 tgacggggctcacaagctgacccagagcaacgccatcctgcgctacattgctcgcaagca 330
||| ||| |||||||||| ||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 161088412 tgatgggcctcacaagctcacccagagcaatgccatccttcgctacattgctcgcaagca 161088353
Query: 331 caacatgtgtggggagacagaggaggagaagattcgagtggatgttttggagaaccaggc 390
|||||||||||||||||||||| |||||||||||| |||||| || |||||| |||||
Sbjct: 161088352 caacatgtgtggggagacagagaaggagaagattcaagtggacattctggagagccaggt 161088293
Query: 391 caacgacacatctgaagccttggccagtctttgctacagccctgactttgagaaactgaa 450
| || | | | ||||||| | ||||||||| |||||||||||||||||||
Sbjct: 161088292 tatggatgtacgcttacacatggccagggtctgctacagctctgactttgagaaactgaa 161088233
Query: 451 gcctgggtacttgaaggagatccctgaaaagatgaagcccttctccgagtttctggggaa 510
|||||| || || | ||||||||||| ||||||| || |||||| | |||| |||||||
Sbjct: 161088232 gcctggttatgtggacgagatccctgagaagatgaggctcttctcagcgtttttggggaa 161088173
Query: 511 gaggccttggtttgcaggggacaagctcacctatgtggatttcctggcttacaatgtcct 570
| |||||||||||||||| ||| |||||||||||| ||||||||||||||| | ||||
Sbjct: 161088172 ggggccttggtttgcaggacacacgctcacctatgtagatttcctggcttacgacatcct 161088113
Query: 571 tgacctgtaccgcatatttgatcccaagtgcctggatgaattcccaaacctgaaagcctt 630
||| || | ||||||||||| |||||||||||||||||||||||||||||||||| |||
Sbjct: 161088112 tgatctacatcgcatatttgagcccaagtgcctggatgaattcccaaacctgaaagactt 161088053
Query: 631 cctcagccgctttgagggcctggagaggatctcagcctacatgaggtccagccgcttcct 690
| ||| |||||||||||| || ||| |||||| || ||||||| ||| || ||||||||
Sbjct: 161088052 catcacccgctttgaggggcttaagaagatctctgcttacatgaagtctagtcgcttcct 161087993
Query: 691 gccacaccccgtgtatacaaagatggccatgtggggcaacaagtagtgccctg-aagcag 749
|||| ||| ||| | |||||| ||||||||||| ||||||||||| |||| || |||
Sbjct: 161087992 cccacgccctttgtttctaaagattgccatgtggggtaacaagtagtggcctgtaaccag 161087933
Query: 750 gagatggagtgaggag-ca-ggccctggaggacagctggccctccctgca 797
||| |||||||||||| || |||||||||| | |||||| || |||||||
Sbjct: 161087932 gagctggagtgaggagtcagggccctggagaagagctggaccaccctgca 161087883
>Sscrofa_Chr04
|| Length = 143465943
Score = 155 bits (78), Expect = 6e-35
Identities = 105/114 (92%)
Strand = Plus / Minus
Query: 534 agctcacctatgtggatttcctggcttacaatgtccttgacctgtaccgcatatttgatc 593
||||||||||||||||||||||||||||| |||||||||||| | |||||||||| || |
Sbjct: 120784400 agctcacctatgtggatttcctggcttacgatgtccttgaccggaaccgcatattcgaac 120784341
Query: 594 ccaagtgcctggatgaattcccaaacctgaaagccttcctcagccgctttgagg 647
||||||||||||||||||||||||||||||||| |||| ||| ||||||||||
Sbjct: 120784340 ccaagtgcctggatgaattcccaaacctgaaagacttcatcactcgctttgagg 120784287
Score = 143 bits (72), Expect = 2e-31
Identities = 90/96 (93%)
Strand = Plus / Minus
Query: 440 gagaaactgaagcctgggtacttgaaggagatccctgaaaagatgaagcccttctccgag 499
|||||||||||||||||||||||||||||||||||||||| ||||| |||||| |||
Sbjct: 120784580 gagaaactgaagcctgggtacttgaaggagatccctgaaatcctgaagtgcttctctgag 120784521
Query: 500 tttctggggaagaggccttggtttgcaggggacaag 535
||||||||||||||||||||||||||||||||||||
Sbjct: 120784520 tttctggggaagaggccttggtttgcaggggacaag 120784485
Score = 79.8 bits (40), Expect = 3e-12
Identities = 55/60 (91%)
Strand = Plus / Minus
Query: 282 acaagctgacccagagcaacgccatcctgcgctacattgctcgcaagcacaacatgtgtg 341
||||||| ||||||||||| |||||| |||||||||| || |||||||||||||||||||
Sbjct: 120828915 acaagctcacccagagcaatgccatcttgcgctacatcgcccgcaagcacaacatgtgtg 120828856
>gb|GL896251.1| Sus scrofa unplaced genomic scaffold chrU_scaffold61
Length = 124
Score = 153 bits (77), Expect = 3e-34
Identities = 77/77 (100%)
Strand = Plus / Minus
Query: 115 gctggcccacgccatccgcctgctcctggagtacacagactccagctacgaggagaagaa 174
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110 gctggcccacgccatccgcctgctcctggagtacacagactccagctacgaggagaagaa 51
Query: 175 gtacacgatgggggacg 191
|||||||||||||||||
Sbjct: 50 gtacacgatgggggacg 34
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 33,163,831
Number of extensions: 264
Number of successful extensions: 264
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 262
Number of HSP's successfully gapped: 7
Length of query: 1143
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 1122
Effective length of database: 2,808,413,156
Effective search space: 3151039561032
Effective search space used: 3151039561032
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)