Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002213
(1013 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001077241.1| glutathione S-transferase mu 1 [Bos taurus]. 402 e-112
Alignment gi|NP_787019.1| glutathione S-transferase Mu 1 [Bos taurus]. 398 e-111
Alignment gi|NP_001073823.1| glutathione S-transferase mu 1 [Bos taurus]. 389 e-108
Alignment gi|NP_001040025.1| glutathione S-transferase mu 3 [Bos taurus]. 345 5e-95
Alignment gi|XP_002686196.1| PREDICTED: glutathione S-transferase M2 [Bos... 313 1e-85
Alignment gi|XP_886532.1| PREDICTED: glutathione S-transferase M2 isoform... 313 1e-85
Alignment gi|XP_002686197.1| PREDICTED: GSTM2 protein-like [Bos taurus]. 306 2e-83
Alignment gi|XP_002703933.1| PREDICTED: GSTM2 protein-like [Bos taurus]. 306 2e-83
Alignment gi|NP_803482.1| glutathione S-transferase P [Bos taurus]. 106 3e-23
Alignment gi|XP_002699444.1| PREDICTED: glutathione S-transferase, pi 1-l... 100 2e-21
>ref|NP_001077241.1| glutathione S-transferase mu 1 [Bos taurus].
Length = 218
Score = 402 bits (1032), Expect = e-112
Identities = 189/218 (86%), Positives = 206/218 (94%)
Frame = +2
Query: 86 MTMILGYWDIRGLAHAIRLLLEYTDSSYEEKKYTLGDAPDYDRSQWLSDKFKLGLDFPNL 265
M MILGYWDIRGLAHAIRLLLEYTDS+YEEKKYT+GDAPDYDRSQWLS+KF LGLDFPNL
Sbjct: 1 MPMILGYWDIRGLAHAIRLLLEYTDSNYEEKKYTMGDAPDYDRSQWLSEKFTLGLDFPNL 60
Query: 266 PYLIDGAHKLTQSNAILRYIARKHNMCGETEEEKIRMDILENQAMDVRLQMARICYSPDF 445
PYLIDGAHKLTQSNAILRYIARKHNMCGETEEEKIR+DILENQ MDVRL MARICYSPDF
Sbjct: 61 PYLIDGAHKLTQSNAILRYIARKHNMCGETEEEKIRVDILENQTMDVRLHMARICYSPDF 120
Query: 446 EKLKPGYLKEIPEKMKPFSEFLGKRPWFAGDKLTYVDFLAYDVLDLYRIFDPKCLDEFPN 625
E LKPG+LKEIPEKMK FS+FL KRPWFAGDKLTYVDFLAYDVLD +RIF+P CLDEFPN
Sbjct: 121 ETLKPGFLKEIPEKMKLFSDFLAKRPWFAGDKLTYVDFLAYDVLDRHRIFEPTCLDEFPN 180
Query: 626 LKAFLSRFEGLERISAYMRSSRFLPHPVYSKMAMWGNK 739
LK F++RFEGL+RISAYM+SSRF P+P++ K+A+WGNK
Sbjct: 181 LKDFITRFEGLKRISAYMKSSRFHPNPMFLKLAVWGNK 218
>ref|NP_787019.1| glutathione S-transferase Mu 1 [Bos taurus].
Length = 218
Score = 398 bits (1022), Expect = e-111
Identities = 184/218 (84%), Positives = 207/218 (94%)
Frame = +2
Query: 86 MTMILGYWDIRGLAHAIRLLLEYTDSSYEEKKYTLGDAPDYDRSQWLSDKFKLGLDFPNL 265
M MILGYWDIRGLAHAIRLLLEYTD++YEE++Y++GDAPDYDRSQWL++KFKLGLDFPNL
Sbjct: 1 MPMILGYWDIRGLAHAIRLLLEYTDTNYEERQYSVGDAPDYDRSQWLNEKFKLGLDFPNL 60
Query: 266 PYLIDGAHKLTQSNAILRYIARKHNMCGETEEEKIRMDILENQAMDVRLQMARICYSPDF 445
PYLIDG HKLTQSNAILRYIARKHN+CGETEEE IR+DILENQ MDVRL MARICYSPDF
Sbjct: 61 PYLIDGTHKLTQSNAILRYIARKHNLCGETEEEMIRVDILENQVMDVRLAMARICYSPDF 120
Query: 446 EKLKPGYLKEIPEKMKPFSEFLGKRPWFAGDKLTYVDFLAYDVLDLYRIFDPKCLDEFPN 625
EKLKPG+LKEIPEK+K FSEFLGKRPWFAGDKLTYVDFL YDVLD++RIF+PKCLD FPN
Sbjct: 121 EKLKPGFLKEIPEKIKLFSEFLGKRPWFAGDKLTYVDFLVYDVLDMHRIFEPKCLDAFPN 180
Query: 626 LKAFLSRFEGLERISAYMRSSRFLPHPVYSKMAMWGNK 739
LK F+SRFEGL++ISAYM+SSRFLP P++ K+A+WGNK
Sbjct: 181 LKDFISRFEGLKKISAYMKSSRFLPGPLFMKLAVWGNK 218
>ref|NP_001073823.1| glutathione S-transferase mu 1 [Bos taurus].
Length = 218
Score = 389 bits (1000), Expect = e-108
Identities = 180/218 (82%), Positives = 202/218 (92%)
Frame = +2
Query: 86 MTMILGYWDIRGLAHAIRLLLEYTDSSYEEKKYTLGDAPDYDRSQWLSDKFKLGLDFPNL 265
M M LGYWDIRGLAHAIRLLLEYTDS+YEEKKYT+GDAPDYDRSQWL++KFKLGLDFPNL
Sbjct: 1 MAMTLGYWDIRGLAHAIRLLLEYTDSNYEEKKYTMGDAPDYDRSQWLNEKFKLGLDFPNL 60
Query: 266 PYLIDGAHKLTQSNAILRYIARKHNMCGETEEEKIRMDILENQAMDVRLQMARICYSPDF 445
PYLIDGAH+LTQS AILRYIARKHNMCGETEEEKIR+D+LENQ MD ++A +CY+P+F
Sbjct: 61 PYLIDGAHRLTQSKAILRYIARKHNMCGETEEEKIRVDVLENQTMDTANELAILCYNPEF 120
Query: 446 EKLKPGYLKEIPEKMKPFSEFLGKRPWFAGDKLTYVDFLAYDVLDLYRIFDPKCLDEFPN 625
EKLK YLKEIP KMK +SEFLG+RPWFAGDKLT+VDFL YDVLD++RIF+PKCLD FPN
Sbjct: 121 EKLKSQYLKEIPGKMKLYSEFLGRRPWFAGDKLTFVDFLVYDVLDIHRIFEPKCLDAFPN 180
Query: 626 LKAFLSRFEGLERISAYMRSSRFLPHPVYSKMAMWGNK 739
LK F+S FEGL+RISAYM+SSRFLPHPVYSKMA+WGNK
Sbjct: 181 LKDFISHFEGLKRISAYMKSSRFLPHPVYSKMAVWGNK 218
>ref|NP_001040025.1| glutathione S-transferase mu 3 [Bos taurus].
Length = 225
Score = 345 bits (884), Expect = 5e-95
Identities = 156/217 (71%), Positives = 191/217 (88%)
Frame = +2
Query: 89 TMILGYWDIRGLAHAIRLLLEYTDSSYEEKKYTLGDAPDYDRSQWLSDKFKLGLDFPNLP 268
+M+LGYWDIRGLAHAIR+LLE+TD+SYEEK+YT G+APDYD+SQWL KFKL LDFPNLP
Sbjct: 6 SMVLGYWDIRGLAHAIRMLLEFTDTSYEEKRYTCGEAPDYDKSQWLDVKFKLDLDFPNLP 65
Query: 269 YLIDGAHKLTQSNAILRYIARKHNMCGETEEEKIRMDILENQAMDVRLQMARICYSPDFE 448
YL+DG ++LTQSNAILRYIARKHNMCG+TEEE+IR+DI+ENQ MD R+Q+ ++CY+PD E
Sbjct: 66 YLMDGKNRLTQSNAILRYIARKHNMCGDTEEERIRVDIMENQIMDFRMQLVQLCYNPDHE 125
Query: 449 KLKPGYLKEIPEKMKPFSEFLGKRPWFAGDKLTYVDFLAYDVLDLYRIFDPKCLDEFPNL 628
KLKP YL+++P ++K FS FLGK WFAG+KLT+VDFL YDVLD R+F+PKCLDEFPNL
Sbjct: 126 KLKPRYLEQLPGQLKQFSLFLGKYSWFAGEKLTFVDFLTYDVLDQNRMFEPKCLDEFPNL 185
Query: 629 KAFLSRFEGLERISAYMRSSRFLPHPVYSKMAMWGNK 739
KAF+ RFE LE+I+ YM+S RFL PV +KMA WGN+
Sbjct: 186 KAFMCRFEALEKIATYMQSDRFLKMPVNNKMAQWGNR 222
>ref|XP_002686196.1| PREDICTED: glutathione S-transferase M2 [Bos taurus].
Length = 181
Score = 313 bits (803), Expect = 1e-85
Identities = 154/218 (70%), Positives = 171/218 (78%)
Frame = +2
Query: 86 MTMILGYWDIRGLAHAIRLLLEYTDSSYEEKKYTLGDAPDYDRSQWLSDKFKLGLDFPNL 265
M MILGYWDIRGLAHAIRLLLEYTD++YEE++Y++GDAPDYDRSQWL +KFKLGLDFPNL
Sbjct: 1 MPMILGYWDIRGLAHAIRLLLEYTDTNYEERQYSVGDAPDYDRSQWLDEKFKLGLDFPNL 60
Query: 266 PYLIDGAHKLTQSNAILRYIARKHNMCGETEEEKIRMDILENQAMDVRLQMARICYSPDF 445
PYLIDG HKLTQSNAILRYIARKHNMCGETEEE IR+DILENQ MDVR MARICYSPDF
Sbjct: 61 PYLIDGTHKLTQSNAILRYIARKHNMCGETEEEMIRVDILENQVMDVRFAMARICYSPDF 120
Query: 446 EKLKPGYLKEIPEKMKPFSEFLGKRPWFAGDKLTYVDFLAYDVLDLYRIFDPKCLDEFPN 625
EKLKPG+LKEIPEK+K FSEFLGKRPWFAGDK
Sbjct: 121 EKLKPGFLKEIPEKIKLFSEFLGKRPWFAGDK---------------------------- 152
Query: 626 LKAFLSRFEGLERISAYMRSSRFLPHPVYSKMAMWGNK 739
GL++ISAYM+SSRFLP P++ K+A+WGNK
Sbjct: 153 ---------GLKKISAYMKSSRFLPGPLFLKLAVWGNK 181
>ref|XP_886532.1| PREDICTED: glutathione S-transferase M2 isoform 2 [Bos taurus].
Length = 181
Score = 313 bits (803), Expect = 1e-85
Identities = 154/218 (70%), Positives = 171/218 (78%)
Frame = +2
Query: 86 MTMILGYWDIRGLAHAIRLLLEYTDSSYEEKKYTLGDAPDYDRSQWLSDKFKLGLDFPNL 265
M MILGYWDIRGLAHAIRLLLEYTD++YEE++Y++GDAPDYDRSQWL +KFKLGLDFPNL
Sbjct: 1 MPMILGYWDIRGLAHAIRLLLEYTDTNYEERQYSVGDAPDYDRSQWLDEKFKLGLDFPNL 60
Query: 266 PYLIDGAHKLTQSNAILRYIARKHNMCGETEEEKIRMDILENQAMDVRLQMARICYSPDF 445
PYLIDG HKLTQSNAILRYIARKHNMCGETEEE IR+DILENQ MDVR MARICYSPDF
Sbjct: 61 PYLIDGTHKLTQSNAILRYIARKHNMCGETEEEMIRVDILENQVMDVRFAMARICYSPDF 120
Query: 446 EKLKPGYLKEIPEKMKPFSEFLGKRPWFAGDKLTYVDFLAYDVLDLYRIFDPKCLDEFPN 625
EKLKPG+LKEIPEK+K FSEFLGKRPWFAGDK
Sbjct: 121 EKLKPGFLKEIPEKIKLFSEFLGKRPWFAGDK---------------------------- 152
Query: 626 LKAFLSRFEGLERISAYMRSSRFLPHPVYSKMAMWGNK 739
GL++ISAYM+SSRFLP P++ K+A+WGNK
Sbjct: 153 ---------GLKKISAYMKSSRFLPGPLFLKLAVWGNK 181
>ref|XP_002686197.1| PREDICTED: GSTM2 protein-like [Bos taurus].
Length = 181
Score = 306 bits (783), Expect = 2e-83
Identities = 152/218 (69%), Positives = 169/218 (77%)
Frame = +2
Query: 86 MTMILGYWDIRGLAHAIRLLLEYTDSSYEEKKYTLGDAPDYDRSQWLSDKFKLGLDFPNL 265
MTMILGYWDIRGLAHAIRLLLEYTDS+Y+EKKYT+GDAPDYDRSQWL++K KLGLDFPNL
Sbjct: 1 MTMILGYWDIRGLAHAIRLLLEYTDSNYKEKKYTMGDAPDYDRSQWLNEKSKLGLDFPNL 60
Query: 266 PYLIDGAHKLTQSNAILRYIARKHNMCGETEEEKIRMDILENQAMDVRLQMARICYSPDF 445
PYLIDG HKLTQSNAILR+IARKHNMCGETEEE IR+D+LENQ MDVRL MARICYSPDF
Sbjct: 61 PYLIDGTHKLTQSNAILRHIARKHNMCGETEEENIRVDLLENQVMDVRLHMARICYSPDF 120
Query: 446 EKLKPGYLKEIPEKMKPFSEFLGKRPWFAGDKLTYVDFLAYDVLDLYRIFDPKCLDEFPN 625
EKLKPGYLKEIP +MK FS FLGKR WFAG+K
Sbjct: 121 EKLKPGYLKEIPGRMKLFSVFLGKRCWFAGNK---------------------------- 152
Query: 626 LKAFLSRFEGLERISAYMRSSRFLPHPVYSKMAMWGNK 739
GL++ISAYM+SS FLP P++ K+A+WGNK
Sbjct: 153 ---------GLKKISAYMKSSHFLPGPLFLKLAVWGNK 181
>ref|XP_002703933.1| PREDICTED: GSTM2 protein-like [Bos taurus].
Length = 181
Score = 306 bits (783), Expect = 2e-83
Identities = 152/218 (69%), Positives = 169/218 (77%)
Frame = +2
Query: 86 MTMILGYWDIRGLAHAIRLLLEYTDSSYEEKKYTLGDAPDYDRSQWLSDKFKLGLDFPNL 265
MTMILGYWDIRGLAHAIRLLLEYTDS+Y+EKKYT+GDAPDYDRSQWL++K KLGLDFPNL
Sbjct: 1 MTMILGYWDIRGLAHAIRLLLEYTDSNYKEKKYTMGDAPDYDRSQWLNEKSKLGLDFPNL 60
Query: 266 PYLIDGAHKLTQSNAILRYIARKHNMCGETEEEKIRMDILENQAMDVRLQMARICYSPDF 445
PYLIDG HKLTQSNAILR+IARKHNMCGETEEE IR+D+LENQ MDVRL MARICYSPDF
Sbjct: 61 PYLIDGTHKLTQSNAILRHIARKHNMCGETEEENIRVDLLENQVMDVRLHMARICYSPDF 120
Query: 446 EKLKPGYLKEIPEKMKPFSEFLGKRPWFAGDKLTYVDFLAYDVLDLYRIFDPKCLDEFPN 625
EKLKPGYLKEIP +MK FS FLGKR WFAG+K
Sbjct: 121 EKLKPGYLKEIPGRMKLFSVFLGKRCWFAGNK---------------------------- 152
Query: 626 LKAFLSRFEGLERISAYMRSSRFLPHPVYSKMAMWGNK 739
GL++ISAYM+SS FLP P++ K+A+WGNK
Sbjct: 153 ---------GLKKISAYMKSSHFLPGPLFLKLAVWGNK 181
>ref|NP_803482.1| glutathione S-transferase P [Bos taurus].
Length = 210
Score = 106 bits (265), Expect = 3e-23
Identities = 57/206 (27%), Positives = 108/206 (52%), Gaps = 4/206 (1%)
Frame = +2
Query: 104 YWDIRGLAHAIRLLLEYTDSSYEEKKYTLGDAPDYDRSQWLSDKFKLGLDFPNLPYLIDG 283
Y+ ++G A+R+LL S++E+ + WL K + LP DG
Sbjct: 8 YFPVQGRCEAMRMLLADQGQSWKEEVVAM--------QSWLQGPLKASCLYGQLPKFQDG 59
Query: 284 AHKLTQSNAILRYIARKHNMCGETEEEKIRMDILENQAMDVRLQMARICYSPDFEKLKPG 463
L QSNAILR++ R + G+ ++E +D++ + D+R + + Y+ ++E K
Sbjct: 60 DLTLYQSNAILRHLGRTLGLYGKDQQEAALVDMVNDGVEDLRCKYVSLIYT-NYEAGKED 118
Query: 464 YLKEIPEKMKPFSEFL----GKRPWFAGDKLTYVDFLAYDVLDLYRIFDPKCLDEFPNLK 631
Y+K +P+ +KPF L G + + GD++++ D+ D+L ++++ P CLD FP L
Sbjct: 119 YVKALPQHLKPFETLLSQNKGGQAFIVGDQISFADYNLLDLLRIHQVLAPSCLDSFPLLS 178
Query: 632 AFLSRFEGLERISAYMRSSRFLPHPV 709
A+++R ++ A++ S + P+
Sbjct: 179 AYVARLNSRPKLKAFLASPEHMNRPI 204
>ref|XP_002699444.1| PREDICTED: glutathione S-transferase, pi 1-like [Bos taurus].
Length = 231
Score = 100 bits (250), Expect = 2e-21
Identities = 59/207 (28%), Positives = 104/207 (50%), Gaps = 4/207 (1%)
Frame = +2
Query: 104 YWDIRGLAHAIRLLLEYTDSSYEEKKYTLGDAPDYDRSQWLSDKFKLGLDFPNLPYLIDG 283
Y+ RG A+R+LL D S++E+ T + WL K + LP DG
Sbjct: 29 YFPTRGRCEALRMLLADQDQSWKEEVVT--------KESWLQGPLKASCLYGQLPKFQDG 80
Query: 284 AHKLTQSNAILRYIARKHNMCGETEEEKIRMDILENQAMDVRLQMARICYSPDFEKLKPG 463
L QSNAILR++ R + G E E +D++ + D+R + + E+ K
Sbjct: 81 DLTLYQSNAILRHLGRSFGLYGTDEREAALVDMVNDGLEDLRRHCGHLIHHKR-EEDKAQ 139
Query: 464 YLKEIPEKMKPFSEFL----GKRPWFAGDKLTYVDFLAYDVLDLYRIFDPKCLDEFPNLK 631
Y++E+P ++PF L G + + GD++++ D+ D+L +++ P CLD FP L
Sbjct: 140 YVQELPVHLQPFETLLSQNQGGQAFIVGDQISFADYNLLDLLLNHQVLVPGCLDPFPLLS 199
Query: 632 AFLSRFEGLERISAYMRSSRFLPHPVY 712
A+++R ++ A++ S + P++
Sbjct: 200 AYVARLSARPKLKAFLASPEHVNRPIF 226
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 42,108,467
Number of extensions: 1303465
Number of successful extensions: 4792
Number of sequences better than 1.0e-05: 16
Number of HSP's gapped: 4761
Number of HSP's successfully gapped: 18
Length of query: 337
Length of database: 17,681,374
Length adjustment: 103
Effective length of query: 234
Effective length of database: 14,273,310
Effective search space: 3339954540
Effective search space used: 3339954540
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002213
(1013 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_537038.2| PREDICTED: similar to Glutathione S-transferase... 383 e-106
Alignment gi|XP_537037.1| PREDICTED: similar to Glutathione S-transferase... 345 5e-95
Alignment gi|XP_865966.1| PREDICTED: similar to glutathione-S-transferase... 308 7e-84
Alignment gi|XP_865995.1| PREDICTED: similar to glutathione S-transferase... 306 2e-83
Alignment gi|XP_852576.1| PREDICTED: similar to Glutathione S-transferase... 213 2e-55
Alignment gi|XP_537961.2| PREDICTED: similar to Glutathione S-transferase... 106 3e-23
Alignment gi|XP_533213.2| PREDICTED: similar to Glutathione S-transferase... 106 3e-23
Alignment gi|XP_532423.2| PREDICTED: similar to Glutathione S-transferase... 104 1e-22
Alignment gi|XP_854117.1| PREDICTED: similar to Glutathione S-transferase... 104 2e-22
Alignment gi|XP_533214.1| PREDICTED: similar to glutathione S-transferase... 101 1e-21
>ref|XP_537038.2| PREDICTED: similar to Glutathione S-transferase Mu 1 (GSTM1-1) (GST
class-mu 1) (GSTM1a-1a) (GSTM1b-1b) (HB subunit 4)
(GTH4) isoform 1 [Canis familiaris].
Length = 218
Score = 383 bits (983), Expect = e-106
Identities = 175/218 (80%), Positives = 200/218 (91%)
Frame = +2
Query: 86 MTMILGYWDIRGLAHAIRLLLEYTDSSYEEKKYTLGDAPDYDRSQWLSDKFKLGLDFPNL 265
M MI GYWDIRGLAHA+RLLLEYTDS YEEKKYT+GDAPDYDRSQWL++KFKLGLDFPNL
Sbjct: 1 MVMIFGYWDIRGLAHAVRLLLEYTDSHYEEKKYTMGDAPDYDRSQWLNEKFKLGLDFPNL 60
Query: 266 PYLIDGAHKLTQSNAILRYIARKHNMCGETEEEKIRMDILENQAMDVRLQMARICYSPDF 445
PYLIDGAHK+TQSNAILRYIARKHN+CGETEEEKIR+DILEN+ MD R+ ARICYSPDF
Sbjct: 61 PYLIDGAHKITQSNAILRYIARKHNLCGETEEEKIRVDILENEVMDTRIYFARICYSPDF 120
Query: 446 EKLKPGYLKEIPEKMKPFSEFLGKRPWFAGDKLTYVDFLAYDVLDLYRIFDPKCLDEFPN 625
EKLKP Y+K IP+KMK +S+FLGKRPWFAG+KLTYVDFL YD+LDL+RIF+P LD FPN
Sbjct: 121 EKLKPEYVKAIPDKMKLYSQFLGKRPWFAGEKLTYVDFLVYDILDLHRIFEPTSLDAFPN 180
Query: 626 LKAFLSRFEGLERISAYMRSSRFLPHPVYSKMAMWGNK 739
LK F++RFEGL+ ISAYM+SSRF+P P++ K+AMWGNK
Sbjct: 181 LKEFMARFEGLKNISAYMKSSRFVPGPLFLKIAMWGNK 218
>ref|XP_537037.1| PREDICTED: similar to Glutathione S-transferase Mu 3 (GSTM3-3) (GST
class-mu 3) (hGSTM3-3) isoform 1 [Canis familiaris].
Length = 226
Score = 345 bits (884), Expect = 5e-95
Identities = 156/216 (72%), Positives = 190/216 (87%)
Frame = +2
Query: 92 MILGYWDIRGLAHAIRLLLEYTDSSYEEKKYTLGDAPDYDRSQWLSDKFKLGLDFPNLPY 271
M+LGYWDIRGLAHAIR+LLE+TD+ YEE++YT G+APDYD+SQWL KFKL LDFPNLPY
Sbjct: 8 MVLGYWDIRGLAHAIRMLLEFTDTCYEERRYTCGEAPDYDKSQWLDVKFKLDLDFPNLPY 67
Query: 272 LIDGAHKLTQSNAILRYIARKHNMCGETEEEKIRMDILENQAMDVRLQMARICYSPDFEK 451
L+DG +K+TQSNAILRYIARKHNMCGETEEE+IR+DI+ENQ MD R+Q+ ++CYSPD EK
Sbjct: 68 LMDGKNKITQSNAILRYIARKHNMCGETEEERIRVDIMENQIMDFRIQLVQLCYSPDLEK 127
Query: 452 LKPGYLKEIPEKMKPFSEFLGKRPWFAGDKLTYVDFLAYDVLDLYRIFDPKCLDEFPNLK 631
LKP YL+++P ++K FS FLGK WFAG+KLT+VDFL YDVLD R+F+PKCLDEFPNLK
Sbjct: 128 LKPRYLEQLPGQLKQFSLFLGKFSWFAGEKLTFVDFLTYDVLDQNRMFEPKCLDEFPNLK 187
Query: 632 AFLSRFEGLERISAYMRSSRFLPHPVYSKMAMWGNK 739
AF+ RFE LE+I+ YM+S RFL P+ +KMA+WGNK
Sbjct: 188 AFMCRFEALEKIANYMQSDRFLKMPINNKMALWGNK 223
>ref|XP_865966.1| PREDICTED: similar to glutathione-S-transferase, mu 5 isoform 2
[Canis familiaris].
Length = 194
Score = 308 bits (788), Expect = 7e-84
Identities = 139/187 (74%), Positives = 167/187 (89%)
Frame = +2
Query: 92 MILGYWDIRGLAHAIRLLLEYTDSSYEEKKYTLGDAPDYDRSQWLSDKFKLGLDFPNLPY 271
M+LGYWDIRGLAHAIR+LLE+TD+ YEE++YT G+APDYD+SQWL KFKL LDFPNLPY
Sbjct: 8 MVLGYWDIRGLAHAIRMLLEFTDTCYEERRYTCGEAPDYDKSQWLDVKFKLDLDFPNLPY 67
Query: 272 LIDGAHKLTQSNAILRYIARKHNMCGETEEEKIRMDILENQAMDVRLQMARICYSPDFEK 451
L+DG +K+TQSNAILRYIARKHNMCGETEEE+IR+DI+ENQ MD R+Q+ ++CYSPD EK
Sbjct: 68 LMDGKNKITQSNAILRYIARKHNMCGETEEERIRVDIMENQIMDFRIQLVQLCYSPDLEK 127
Query: 452 LKPGYLKEIPEKMKPFSEFLGKRPWFAGDKLTYVDFLAYDVLDLYRIFDPKCLDEFPNLK 631
LKP YL+++P ++K FS FLGK WFAG+KLT+VDFL YDVLD R+F+PKCLDEFPNLK
Sbjct: 128 LKPRYLEQLPGQLKQFSLFLGKFSWFAGEKLTFVDFLTYDVLDQNRMFEPKCLDEFPNLK 187
Query: 632 AFLSRFE 652
AF+ RFE
Sbjct: 188 AFMCRFE 194
>ref|XP_865995.1| PREDICTED: similar to glutathione S-transferase M1 isoform 2
isoform 2 [Canis familiaris].
Length = 181
Score = 306 bits (784), Expect = 2e-83
Identities = 148/218 (67%), Positives = 168/218 (77%)
Frame = +2
Query: 86 MTMILGYWDIRGLAHAIRLLLEYTDSSYEEKKYTLGDAPDYDRSQWLSDKFKLGLDFPNL 265
M MI GYWDIRGLAHA+RLLLEYTDS YEEKKYT+GDAPDYDRSQWL++KFKLGLDFPNL
Sbjct: 1 MVMIFGYWDIRGLAHAVRLLLEYTDSHYEEKKYTMGDAPDYDRSQWLNEKFKLGLDFPNL 60
Query: 266 PYLIDGAHKLTQSNAILRYIARKHNMCGETEEEKIRMDILENQAMDVRLQMARICYSPDF 445
PYLIDGAHK+TQSNAILRYIARKHN+CGETEEEKIR+DILEN+ MD R+ ARICYSPDF
Sbjct: 61 PYLIDGAHKITQSNAILRYIARKHNLCGETEEEKIRVDILENEVMDTRIYFARICYSPDF 120
Query: 446 EKLKPGYLKEIPEKMKPFSEFLGKRPWFAGDKLTYVDFLAYDVLDLYRIFDPKCLDEFPN 625
EKLKP Y+K IP+KMK +S+FLGKRPWFAG+K
Sbjct: 121 EKLKPEYVKAIPDKMKLYSQFLGKRPWFAGEK---------------------------- 152
Query: 626 LKAFLSRFEGLERISAYMRSSRFLPHPVYSKMAMWGNK 739
GL+ ISAYM+SSRF+P P++ K+AMWGNK
Sbjct: 153 ---------GLKNISAYMKSSRFVPGPLFLKIAMWGNK 181
>ref|XP_852576.1| PREDICTED: similar to Glutathione S-transferase Mu 1 (GSTM1-1) (GST
class-mu 1) (GSTM1a-1a) (GSTM1b-1b) (HB subunit 4)
(GTH4) [Canis familiaris].
Length = 218
Score = 213 bits (543), Expect = 2e-55
Identities = 105/158 (66%), Positives = 118/158 (74%)
Frame = +2
Query: 158 DSSYEEKKYTLGDAPDYDRSQWLSDKFKLGLDFPNLPYLIDGAHKLTQSNAILRYIARKH 337
DS YEEKKYT+GDAP YDRSQWL++KFKLGLDFPNLPYLIDGAHK+TQSNAILRYIARKH
Sbjct: 71 DSHYEEKKYTMGDAPGYDRSQWLNEKFKLGLDFPNLPYLIDGAHKITQSNAILRYIARKH 130
Query: 338 NMCGETEEEKIRMDILENQAMDVRLQMARICYSPDFEKLKPGYLKEIPEKMKPFSEFLGK 517
N+ G+ E ICYSPDFEKLKP Y+K P+KMK +S+ LGK
Sbjct: 131 NLWGDGRGED------------------SICYSPDFEKLKPEYVKANPDKMKLYSQLLGK 172
Query: 518 RPWFAGDKLTYVDFLAYDVLDLYRIFDPKCLDEFPNLK 631
RPWFAG+KLTYVDF D+LDL RI +P LD PNLK
Sbjct: 173 RPWFAGEKLTYVDFPVSDILDLPRIVEPTSLDALPNLK 210
>ref|XP_537961.2| PREDICTED: similar to Glutathione S-transferase P (GST 7-7) (Chain
7) (GST class-pi) [Canis familiaris].
Length = 231
Score = 106 bits (265), Expect = 3e-23
Identities = 58/206 (28%), Positives = 109/206 (52%), Gaps = 4/206 (1%)
Frame = +2
Query: 104 YWDIRGLAHAIRLLLEYTDSSYEEKKYTLGDAPDYDRSQWLSDKFKLGLDFPNLPYLIDG 283
Y+ +RG A+R+LL S++E+ T+ W+ K + LP DG
Sbjct: 29 YFPVRGRCEAMRMLLADQGQSWKEEVVTM--------ETWMKGSLKASCLYGQLPKFQDG 80
Query: 284 AHKLTQSNAILRYIARKHNMCGETEEEKIRMDILENQAMDVRLQMARICYSPDFEKLKPG 463
L QSNAILR++ R + G+ ++E +D++ + D+R + A + Y+ ++E K
Sbjct: 81 DLTLYQSNAILRHLGRSLGLYGKDQQEAALLDVVNDGVEDLRCKYALLIYT-NYEAGKEE 139
Query: 464 YLKEIPEKMKPFSEFL----GKRPWFAGDKLTYVDFLAYDVLDLYRIFDPKCLDEFPNLK 631
Y+K +P +KPF L G + + G+++++ D+ D+L ++++ P CLD FP L
Sbjct: 140 YVKALPGYLKPFETLLSQNEGGQAFIVGNQISFADYNLLDLLLIHQVLAPSCLDSFPLLS 199
Query: 632 AFLSRFEGLERISAYMRSSRFLPHPV 709
A+++R ++ A++ S + P+
Sbjct: 200 AYVARLSARPKLKAFLSSPEHVNRPI 225
>ref|XP_533213.2| PREDICTED: similar to Glutathione S-transferase P (GST 7-7) (Chain
7) (GST class-pi) [Canis familiaris].
Length = 317
Score = 106 bits (265), Expect = 3e-23
Identities = 58/206 (28%), Positives = 109/206 (52%), Gaps = 4/206 (1%)
Frame = +2
Query: 104 YWDIRGLAHAIRLLLEYTDSSYEEKKYTLGDAPDYDRSQWLSDKFKLGLDFPNLPYLIDG 283
Y+ +RG A+R+LL S++E+ T+ W+ K + LP DG
Sbjct: 115 YFPVRGRCEAMRMLLADQGQSWKEEVVTM--------ETWMKGSLKASCLYGQLPKFQDG 166
Query: 284 AHKLTQSNAILRYIARKHNMCGETEEEKIRMDILENQAMDVRLQMARICYSPDFEKLKPG 463
L QSNAILR++ R + G+ ++E +D++ + D+R + A + Y+ ++E K
Sbjct: 167 DLTLYQSNAILRHLGRSLGLYGKDQQEAALLDVVNDGVEDLRCKYALLIYT-NYEAGKEE 225
Query: 464 YLKEIPEKMKPFSEFL----GKRPWFAGDKLTYVDFLAYDVLDLYRIFDPKCLDEFPNLK 631
Y+K +P +KPF L G + + G+++++ D+ D+L ++++ P CLD FP L
Sbjct: 226 YVKALPGYLKPFETLLSQNEGGQAFIVGNQISFADYNLLDLLLIHQVLAPSCLDSFPLLS 285
Query: 632 AFLSRFEGLERISAYMRSSRFLPHPV 709
A+++R ++ A++ S + P+
Sbjct: 286 AYVARLSARPKLKAFLSSPEHVNRPI 311
>ref|XP_532423.2| PREDICTED: similar to Glutathione S-transferase P (GST 7-7) (Chain
7) (GST class-pi) [Canis familiaris].
Length = 210
Score = 104 bits (260), Expect = 1e-22
Identities = 57/206 (27%), Positives = 109/206 (52%), Gaps = 4/206 (1%)
Frame = +2
Query: 104 YWDIRGLAHAIRLLLEYTDSSYEEKKYTLGDAPDYDRSQWLSDKFKLGLDFPNLPYLIDG 283
Y+ +RG A+R+LL S++E+ T+ W+ K + LP DG
Sbjct: 8 YFPVRGRCEAMRMLLADQSQSWKEEVVTM--------ETWMKGSLKASCLYGQLPKFQDG 59
Query: 284 AHKLTQSNAILRYIARKHNMCGETEEEKIRMDILENQAMDVRLQMARICYSPDFEKLKPG 463
L QSNAILR++ R + G+ ++E +D++ + D+R + A + Y+ ++E K
Sbjct: 60 DLTLYQSNAILRHLGRSLGLYGKDQQEAALLDVVNDGVEDLRCKYALLIYT-NYEAGKEE 118
Query: 464 YLKEIPEKMKPFSEFL----GKRPWFAGDKLTYVDFLAYDVLDLYRIFDPKCLDEFPNLK 631
Y+K +P +KPF + L G + + G+++++ D+ D+L ++++ P CLD FP L
Sbjct: 119 YVKALPGYLKPFEKLLSQNEGGQAFIVGNQISFADYNLLDLLLIHQVLAPSCLDSFPLLS 178
Query: 632 AFLSRFEGLERISAYMRSSRFLPHPV 709
A+++ ++ A++ S + P+
Sbjct: 179 AYVACLSARPKLKAFLSSPEHVNRPI 204
>ref|XP_854117.1| PREDICTED: similar to Glutathione S-transferase P (GST 7-7) (Chain
7) (GST class-pi) [Canis familiaris].
Length = 318
Score = 104 bits (259), Expect = 2e-22
Identities = 57/206 (27%), Positives = 109/206 (52%), Gaps = 4/206 (1%)
Frame = +2
Query: 104 YWDIRGLAHAIRLLLEYTDSSYEEKKYTLGDAPDYDRSQWLSDKFKLGLDFPNLPYLIDG 283
Y+ +RG A+ +LL S++E+ T+ W++ K + LP DG
Sbjct: 116 YFPVRGRCEAMHMLLADQGQSWKEEVVTM--------ETWMNGSLKASCLYGQLPKFQDG 167
Query: 284 AHKLTQSNAILRYIARKHNMCGETEEEKIRMDILENQAMDVRLQMARICYSPDFEKLKPG 463
L QSNAILR++ R + G+ ++E +D++ + D+R + A + Y+ ++E K
Sbjct: 168 DLTLYQSNAILRHLGRSLGLYGKDQQEAALLDVVNDGVEDLRCKYALLIYT-NYEAGKEE 226
Query: 464 YLKEIPEKMKPFSEFL----GKRPWFAGDKLTYVDFLAYDVLDLYRIFDPKCLDEFPNLK 631
Y+K +P +KPF L G + + G+++++ D+ D+L ++++ P CLD FP L
Sbjct: 227 YVKALPGYLKPFEMLLSQNEGGQAFIVGNQISFADYNLLDLLLIHQVLAPSCLDSFPLLS 286
Query: 632 AFLSRFEGLERISAYMRSSRFLPHPV 709
A+++R ++ A++ S + P+
Sbjct: 287 AYVARLSARPKLKAFLLSPEHVNRPI 312
>ref|XP_533214.1| PREDICTED: similar to glutathione S-transferase, pi 1 [Canis
familiaris].
Length = 210
Score = 101 bits (252), Expect = 1e-21
Identities = 59/207 (28%), Positives = 106/207 (51%), Gaps = 4/207 (1%)
Frame = +2
Query: 104 YWDIRGLAHAIRLLLEYTDSSYEEKKYTLGDAPDYDRSQWLSDKFKLGLDFPNLPYLIDG 283
Y+ +RG A+R+LL S++E+ T + W+ K + LP DG
Sbjct: 8 YFPVRGRCEAMRMLLADQGQSWKEEVVT--------KDSWMQSPLKASCLYGQLPKFQDG 59
Query: 284 AHKLTQSNAILRYIARKHNMCGETEEEKIRMDILENQAMDVRLQMARICYSPDFEKLKPG 463
L QSNAILR++ R + G+ + E +D++ + DVR +++ + +E K
Sbjct: 60 DLTLYQSNAILRHLGRTFGLYGKDQREAALVDMVNDGVEDVRRHCSQLIHH-SYEGGKAR 118
Query: 464 YLKEIPEKMKPFSEFL----GKRPWFAGDKLTYVDFLAYDVLDLYRIFDPKCLDEFPNLK 631
Y++E+P +KPF L G + + GD++++ D+ D+L +++ P CLD P L
Sbjct: 119 YVQELPGYLKPFETLLIQNQGGQAFIVGDQISFADYNLLDLLLNHQVLAPGCLDSHPLLL 178
Query: 632 AFLSRFEGLERISAYMRSSRFLPHPVY 712
A+++R ++ AY+ S + PV+
Sbjct: 179 AYVTRLSARPKLKAYLASPEHVNRPVH 205
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 43,876,263
Number of extensions: 1336950
Number of successful extensions: 4969
Number of sequences better than 1.0e-05: 17
Number of HSP's gapped: 4938
Number of HSP's successfully gapped: 17
Length of query: 337
Length of database: 18,874,504
Length adjustment: 103
Effective length of query: 234
Effective length of database: 15,440,896
Effective search space: 3613169664
Effective search space used: 3613169664
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002213
(1013 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_000552.2| glutathione S-transferase Mu 1 isoform 1 [Homo ... 392 e-109
Alignment gi|NP_000841.1| glutathione S-transferase Mu 4 isoform 1 [Homo ... 391 e-109
Alignment gi|NP_000839.1| glutathione S-transferase Mu 2 isoform 1 [Homo ... 371 e-103
Alignment gi|NP_000842.2| glutathione S-transferase Mu 5 [Homo sapiens]. 369 e-102
Alignment gi|NP_000840.2| glutathione S-transferase Mu 3 [Homo sapiens]. 349 2e-96
Alignment gi|NP_671489.1| glutathione S-transferase Mu 4 isoform 2 [Homo ... 343 1e-94
Alignment gi|NP_001135840.1| glutathione S-transferase Mu 2 isoform 2 [Ho... 320 1e-87
Alignment gi|NP_666533.1| glutathione S-transferase Mu 1 isoform 2 [Homo ... 311 8e-85
Alignment gi|NP_000843.1| glutathione S-transferase P [Homo sapiens]. 102 7e-22
Alignment gi|NP_055300.1| hematopoietic prostaglandin D synthase [Homo sa... 71 1e-12
>ref|NP_000552.2| glutathione S-transferase Mu 1 isoform 1 [Homo sapiens].
Length = 218
Score = 392 bits (1008), Expect = e-109
Identities = 181/218 (83%), Positives = 205/218 (94%)
Frame = +2
Query: 86 MTMILGYWDIRGLAHAIRLLLEYTDSSYEEKKYTLGDAPDYDRSQWLSDKFKLGLDFPNL 265
M MILGYWDIRGLAHAIRLLLEYTDSSYEEKKYT+GDAPDYDRSQWL++KFKLGLDFPNL
Sbjct: 1 MPMILGYWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLNEKFKLGLDFPNL 60
Query: 266 PYLIDGAHKLTQSNAILRYIARKHNMCGETEEEKIRMDILENQAMDVRLQMARICYSPDF 445
PYLIDGAHK+TQSNAIL YIARKHN+CGETEEEKIR+DILENQ MD +Q+ ICY+P+F
Sbjct: 61 PYLIDGAHKITQSNAILCYIARKHNLCGETEEEKIRVDILENQTMDNHMQLGMICYNPEF 120
Query: 446 EKLKPGYLKEIPEKMKPFSEFLGKRPWFAGDKLTYVDFLAYDVLDLYRIFDPKCLDEFPN 625
EKLKP YL+E+PEK+K +SEFLGKRPWFAG+K+T+VDFL YDVLDL+RIF+PKCLD FPN
Sbjct: 121 EKLKPKYLEELPEKLKLYSEFLGKRPWFAGNKITFVDFLVYDVLDLHRIFEPKCLDAFPN 180
Query: 626 LKAFLSRFEGLERISAYMRSSRFLPHPVYSKMAMWGNK 739
LK F+SRFEGLE+ISAYM+SSRFLP PV+SKMA+WGNK
Sbjct: 181 LKDFISRFEGLEKISAYMKSSRFLPRPVFSKMAVWGNK 218
>ref|NP_000841.1| glutathione S-transferase Mu 4 isoform 1 [Homo sapiens].
Length = 218
Score = 391 bits (1004), Expect = e-109
Identities = 180/218 (82%), Positives = 205/218 (94%)
Frame = +2
Query: 86 MTMILGYWDIRGLAHAIRLLLEYTDSSYEEKKYTLGDAPDYDRSQWLSDKFKLGLDFPNL 265
M+M LGYWDIRGLAHAIRLLLEYTDSSYEEKKYT+GDAPDYDRSQWL++KFKLGLDFPNL
Sbjct: 1 MSMTLGYWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLNEKFKLGLDFPNL 60
Query: 266 PYLIDGAHKLTQSNAILRYIARKHNMCGETEEEKIRMDILENQAMDVRLQMARICYSPDF 445
PYLIDGAHK+TQSNAIL YIARKHN+CGETEEEKIR+DILENQAMDV Q+AR+CYSPDF
Sbjct: 61 PYLIDGAHKITQSNAILCYIARKHNLCGETEEEKIRVDILENQAMDVSNQLARVCYSPDF 120
Query: 446 EKLKPGYLKEIPEKMKPFSEFLGKRPWFAGDKLTYVDFLAYDVLDLYRIFDPKCLDEFPN 625
EKLKP YL+E+P M+ FS+FLGKRPWF GDK+T+VDFLAYDVLDL+RIF+P CLD FPN
Sbjct: 121 EKLKPEYLEELPTMMQHFSQFLGKRPWFVGDKITFVDFLAYDVLDLHRIFEPNCLDAFPN 180
Query: 626 LKAFLSRFEGLERISAYMRSSRFLPHPVYSKMAMWGNK 739
LK F+SRFEGLE+ISAYM+SSRFLP P+Y+++A+WGNK
Sbjct: 181 LKDFISRFEGLEKISAYMKSSRFLPKPLYTRVAVWGNK 218
>ref|NP_000839.1| glutathione S-transferase Mu 2 isoform 1 [Homo sapiens].
Length = 218
Score = 371 bits (952), Expect = e-103
Identities = 167/218 (76%), Positives = 200/218 (91%)
Frame = +2
Query: 86 MTMILGYWDIRGLAHAIRLLLEYTDSSYEEKKYTLGDAPDYDRSQWLSDKFKLGLDFPNL 265
M M LGYW+IRGLAH+IRLLLEYTDSSYEEKKYT+GDAPDYDRSQWL++KFKLGLDFPNL
Sbjct: 1 MPMTLGYWNIRGLAHSIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLNEKFKLGLDFPNL 60
Query: 266 PYLIDGAHKLTQSNAILRYIARKHNMCGETEEEKIRMDILENQAMDVRLQMARICYSPDF 445
PYLIDG HK+TQSNAILRYIARKHN+CGE+E+E+IR DILENQ MD R+Q+A++CY PDF
Sbjct: 61 PYLIDGTHKITQSNAILRYIARKHNLCGESEKEQIREDILENQFMDSRMQLAKLCYDPDF 120
Query: 446 EKLKPGYLKEIPEKMKPFSEFLGKRPWFAGDKLTYVDFLAYDVLDLYRIFDPKCLDEFPN 625
EKLKP YL+ +PE +K +S+FLGK+PWF GDK+T+VDF+AYDVL+ ++F+P CLD FPN
Sbjct: 121 EKLKPEYLQALPEMLKLYSQFLGKQPWFLGDKITFVDFIAYDVLERNQVFEPSCLDAFPN 180
Query: 626 LKAFLSRFEGLERISAYMRSSRFLPHPVYSKMAMWGNK 739
LK F+SRFEGLE+ISAYM+SSRFLP PV++KMA+WGNK
Sbjct: 181 LKDFISRFEGLEKISAYMKSSRFLPRPVFTKMAVWGNK 218
>ref|NP_000842.2| glutathione S-transferase Mu 5 [Homo sapiens].
Length = 218
Score = 369 bits (948), Expect = e-102
Identities = 172/218 (78%), Positives = 197/218 (90%)
Frame = +2
Query: 86 MTMILGYWDIRGLAHAIRLLLEYTDSSYEEKKYTLGDAPDYDRSQWLSDKFKLGLDFPNL 265
M M LGYWDIRGLAHAIRLLLEYTDSSY EKKYTLGDAPDYDRSQWL++KFKLGLDFPNL
Sbjct: 1 MPMTLGYWDIRGLAHAIRLLLEYTDSSYVEKKYTLGDAPDYDRSQWLNEKFKLGLDFPNL 60
Query: 266 PYLIDGAHKLTQSNAILRYIARKHNMCGETEEEKIRMDILENQAMDVRLQMARICYSPDF 445
PYLIDGAHK+TQSNAILRYIARKHN+CGETEEEKIR+DILENQ MD +++ R+CY PDF
Sbjct: 61 PYLIDGAHKITQSNAILRYIARKHNLCGETEEEKIRVDILENQVMDNHMELVRLCYDPDF 120
Query: 446 EKLKPGYLKEIPEKMKPFSEFLGKRPWFAGDKLTYVDFLAYDVLDLYRIFDPKCLDEFPN 625
EKLKP YL+E+PEK+K +SEFLGKRPWFAGDK+T+VDFLAYDVLD+ RIF+PKCLD F N
Sbjct: 121 EKLKPKYLEELPEKLKLYSEFLGKRPWFAGDKITFVDFLAYDVLDMKRIFEPKCLDAFLN 180
Query: 626 LKAFLSRFEGLERISAYMRSSRFLPHPVYSKMAMWGNK 739
LK F+SRFEGL++ISAYM+SS+FL ++ K A W +K
Sbjct: 181 LKDFISRFEGLKKISAYMKSSQFLRGLLFGKSATWNSK 218
>ref|NP_000840.2| glutathione S-transferase Mu 3 [Homo sapiens].
Length = 225
Score = 349 bits (896), Expect = 2e-96
Identities = 161/217 (74%), Positives = 189/217 (87%)
Frame = +2
Query: 89 TMILGYWDIRGLAHAIRLLLEYTDSSYEEKKYTLGDAPDYDRSQWLSDKFKLGLDFPNLP 268
+M+LGYWDIRGLAHAIRLLLE+TD+SYEEK+YT G+APDYDRSQWL KFKL LDFPNLP
Sbjct: 6 SMVLGYWDIRGLAHAIRLLLEFTDTSYEEKRYTCGEAPDYDRSQWLDVKFKLDLDFPNLP 65
Query: 269 YLIDGAHKLTQSNAILRYIARKHNMCGETEEEKIRMDILENQAMDVRLQMARICYSPDFE 448
YL+DG +K+TQSNAILRYIARKHNMCGETEEEKIR+DI+ENQ MD R Q+ R+CYS D E
Sbjct: 66 YLLDGKNKITQSNAILRYIARKHNMCGETEEEKIRVDIIENQVMDFRTQLIRLCYSSDHE 125
Query: 449 KLKPGYLKEIPEKMKPFSEFLGKRPWFAGDKLTYVDFLAYDVLDLYRIFDPKCLDEFPNL 628
KLKP YL+E+P ++K FS FLGK WFAG+KLT+VDFL YD+LD RIFDPKCLDEFPNL
Sbjct: 126 KLKPQYLEELPGQLKQFSMFLGKFSWFAGEKLTFVDFLTYDILDQNRIFDPKCLDEFPNL 185
Query: 629 KAFLSRFEGLERISAYMRSSRFLPHPVYSKMAMWGNK 739
KAF+ RFE LE+I+AY++S +F P+ +KMA WGNK
Sbjct: 186 KAFMCRFEALEKIAAYLQSDQFCKMPINNKMAQWGNK 222
>ref|NP_671489.1| glutathione S-transferase Mu 4 isoform 2 [Homo sapiens].
Length = 195
Score = 343 bits (880), Expect = 1e-94
Identities = 159/189 (84%), Positives = 177/189 (93%)
Frame = +2
Query: 86 MTMILGYWDIRGLAHAIRLLLEYTDSSYEEKKYTLGDAPDYDRSQWLSDKFKLGLDFPNL 265
M+M LGYWDIRGLAHAIRLLLEYTDSSYEEKKYT+GDAPDYDRSQWL++KFKLGLDFPNL
Sbjct: 1 MSMTLGYWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLNEKFKLGLDFPNL 60
Query: 266 PYLIDGAHKLTQSNAILRYIARKHNMCGETEEEKIRMDILENQAMDVRLQMARICYSPDF 445
PYLIDGAHK+TQSNAIL YIARKHN+CGETEEEKIR+DILENQAMDV Q+AR+CYSPDF
Sbjct: 61 PYLIDGAHKITQSNAILCYIARKHNLCGETEEEKIRVDILENQAMDVSNQLARVCYSPDF 120
Query: 446 EKLKPGYLKEIPEKMKPFSEFLGKRPWFAGDKLTYVDFLAYDVLDLYRIFDPKCLDEFPN 625
EKLKP YL+E+P M+ FS+FLGKRPWF GDK+T+VDFLAYDVLDL+RIF+P CLD FPN
Sbjct: 121 EKLKPEYLEELPTMMQHFSQFLGKRPWFVGDKITFVDFLAYDVLDLHRIFEPNCLDAFPN 180
Query: 626 LKAFLSRFE 652
LK F+SRFE
Sbjct: 181 LKDFISRFE 189
>ref|NP_001135840.1| glutathione S-transferase Mu 2 isoform 2 [Homo sapiens].
Length = 191
Score = 320 bits (821), Expect = 1e-87
Identities = 144/189 (76%), Positives = 172/189 (91%)
Frame = +2
Query: 86 MTMILGYWDIRGLAHAIRLLLEYTDSSYEEKKYTLGDAPDYDRSQWLSDKFKLGLDFPNL 265
M M LGYW+IRGLAH+IRLLLEYTDSSYEEKKYT+GDAPDYDRSQWL++KFKLGLDFPNL
Sbjct: 1 MPMTLGYWNIRGLAHSIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLNEKFKLGLDFPNL 60
Query: 266 PYLIDGAHKLTQSNAILRYIARKHNMCGETEEEKIRMDILENQAMDVRLQMARICYSPDF 445
PYLIDG HK+TQSNAILRYIARKHN+CGE+E+E+IR DILENQ MD R+Q+A++CY PDF
Sbjct: 61 PYLIDGTHKITQSNAILRYIARKHNLCGESEKEQIREDILENQFMDSRMQLAKLCYDPDF 120
Query: 446 EKLKPGYLKEIPEKMKPFSEFLGKRPWFAGDKLTYVDFLAYDVLDLYRIFDPKCLDEFPN 625
EKLKP YL+ +PE +K +S+FLGK+PWF GDK+T+VDF+AYDVL+ ++F+P CLD FPN
Sbjct: 121 EKLKPEYLQALPEMLKLYSQFLGKQPWFLGDKITFVDFIAYDVLERNQVFEPSCLDAFPN 180
Query: 626 LKAFLSRFE 652
LK F+SRFE
Sbjct: 181 LKDFISRFE 189
>ref|NP_666533.1| glutathione S-transferase Mu 1 isoform 2 [Homo sapiens].
Length = 181
Score = 311 bits (796), Expect = 8e-85
Identities = 152/218 (69%), Positives = 171/218 (78%)
Frame = +2
Query: 86 MTMILGYWDIRGLAHAIRLLLEYTDSSYEEKKYTLGDAPDYDRSQWLSDKFKLGLDFPNL 265
M MILGYWDIRGLAHAIRLLLEYTDSSYEEKKYT+GDAPDYDRSQWL++KFKLGLDFPNL
Sbjct: 1 MPMILGYWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLNEKFKLGLDFPNL 60
Query: 266 PYLIDGAHKLTQSNAILRYIARKHNMCGETEEEKIRMDILENQAMDVRLQMARICYSPDF 445
PYLIDGAHK+TQSNAIL YIARKHN+CGETEEEKIR+DILENQ MD +Q+ ICY+P+F
Sbjct: 61 PYLIDGAHKITQSNAILCYIARKHNLCGETEEEKIRVDILENQTMDNHMQLGMICYNPEF 120
Query: 446 EKLKPGYLKEIPEKMKPFSEFLGKRPWFAGDKLTYVDFLAYDVLDLYRIFDPKCLDEFPN 625
EKLKP YL+E+PEK+K +SEFLGKRPWFAG+K
Sbjct: 121 EKLKPKYLEELPEKLKLYSEFLGKRPWFAGNK---------------------------- 152
Query: 626 LKAFLSRFEGLERISAYMRSSRFLPHPVYSKMAMWGNK 739
GLE+ISAYM+SSRFLP PV+SKMA+WGNK
Sbjct: 153 ---------GLEKISAYMKSSRFLPRPVFSKMAVWGNK 181
>ref|NP_000843.1| glutathione S-transferase P [Homo sapiens].
Length = 210
Score = 102 bits (253), Expect = 7e-22
Identities = 57/206 (27%), Positives = 106/206 (51%), Gaps = 4/206 (1%)
Frame = +2
Query: 104 YWDIRGLAHAIRLLLEYTDSSYEEKKYTLGDAPDYDRSQWLSDKFKLGLDFPNLPYLIDG 283
Y+ +RG A+R+LL S++E+ T+ W K + LP DG
Sbjct: 8 YFPVRGRCAALRMLLADQGQSWKEEVVTV--------ETWQEGSLKASCLYGQLPKFQDG 59
Query: 284 AHKLTQSNAILRYIARKHNMCGETEEEKIRMDILENQAMDVRLQMARICYSPDFEKLKPG 463
L QSN ILR++ R + G+ ++E +D++ + D+R + + Y+ ++E K
Sbjct: 60 DLTLYQSNTILRHLGRTLGLYGKDQQEAALVDMVNDGVEDLRCKYISLIYT-NYEAGKDD 118
Query: 464 YLKEIPEKMKPFSEFL----GKRPWFAGDKLTYVDFLAYDVLDLYRIFDPKCLDEFPNLK 631
Y+K +P ++KPF L G + + GD++++ D+ D+L ++ + P CLD FP L
Sbjct: 119 YVKALPGQLKPFETLLSQNQGGKTFIVGDQISFADYNLLDLLLIHEVLAPGCLDAFPLLS 178
Query: 632 AFLSRFEGLERISAYMRSSRFLPHPV 709
A++ R ++ A++ S ++ P+
Sbjct: 179 AYVGRLSARPKLKAFLASPEYVNLPI 204
>ref|NP_055300.1| hematopoietic prostaglandin D synthase [Homo sapiens].
Length = 199
Score = 71.2 bits (173), Expect = 1e-12
Identities = 50/200 (25%), Positives = 86/200 (43%), Gaps = 5/200 (2%)
Frame = +2
Query: 98 LGYWDIRGLAHAIRLLLEYTDSSYEEKKYTLGDAPDYDRSQWLSDKFKLGLDFPNLPYLI 277
L Y+++RG A IR + Y D YE+ + D P+ K L F +P L
Sbjct: 6 LTYFNMRGRAEIIRYIFAYLDIQYEDHRIEQADWPE----------IKSTLPFGKIPILE 55
Query: 278 DGAHKLTQSNAILRYIARKHNMCGETEEEKIRMDILENQAMDVRLQMARICYSPDFEKLK 457
L QS AI RY+ + ++ G TE E+ +D + + D M+ ++ + +K
Sbjct: 56 VDGLTLHQSLAIARYLTKNTDLAGNTEMEQCHVDAIVDTLDDF---MSCFPWAEKKQDVK 112
Query: 458 PGYLKEI-----PEKMKPFSEFLGKRPWFAGDKLTYVDFLAYDVLDLYRIFDPKCLDEFP 622
E+ P M+ +LG R W G+ +T+ DF +F P LD P
Sbjct: 113 EQMFNELLTYNAPHLMQDLDTYLGGREWLIGNSVTWADFYWEICSTTLLVFKPDLLDNHP 172
Query: 623 NLKAFLSRFEGLERISAYMR 682
L + + + ++ +++
Sbjct: 173 RLVTLRKKVQAIPAVANWIK 192
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 43,051,118
Number of extensions: 1313682
Number of successful extensions: 4875
Number of sequences better than 1.0e-05: 14
Number of HSP's gapped: 4855
Number of HSP's successfully gapped: 15
Length of query: 337
Length of database: 18,297,164
Length adjustment: 103
Effective length of query: 234
Effective length of database: 14,901,872
Effective search space: 3487038048
Effective search space used: 3487038048
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002213
(1013 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_032209.1| glutathione S-transferase Mu 2 [Mus musculus]. 375 e-104
Alignment gi|NP_034488.1| glutathione S-transferase Mu 1 [Mus musculus]. 364 e-101
Alignment gi|NP_081040.1| glutathione S-transferase mu 4 isoform 1 [Mus m... 364 e-101
Alignment gi|NP_034489.1| glutathione S-transferase Mu 3 [Mus musculus]. 363 e-100
Alignment gi|NP_080948.2| glutathione S-transferase Mu 7 [Mus musculus]. 361 e-100
Alignment gi|NP_032210.3| glutathione S-transferase Mu 6 [Mus musculus]. 353 9e-98
Alignment gi|NP_034490.1| glutathione S-transferase Mu 5 [Mus musculus]. 338 3e-93
Alignment gi|NP_001153883.1| glutathione S-transferase mu 4 isoform 2 [Mu... 303 1e-82
Alignment gi|XP_136255.4| PREDICTED: glutathione S-transferase Mu 1-like ... 266 2e-71
Alignment gi|XP_920855.1| PREDICTED: glutathione S-transferase Mu 1-like ... 266 2e-71
>ref|NP_032209.1| glutathione S-transferase Mu 2 [Mus musculus].
Length = 218
Score = 375 bits (963), Expect = e-104
Identities = 171/218 (78%), Positives = 199/218 (91%)
Frame = +2
Query: 86 MTMILGYWDIRGLAHAIRLLLEYTDSSYEEKKYTLGDAPDYDRSQWLSDKFKLGLDFPNL 265
M M LGYWDIRGLAHAIRLLLEYTD+SYE+KKYT+GDAPDYDRSQWLS+KFKLGLDFPNL
Sbjct: 1 MPMTLGYWDIRGLAHAIRLLLEYTDTSYEDKKYTMGDAPDYDRSQWLSEKFKLGLDFPNL 60
Query: 266 PYLIDGAHKLTQSNAILRYIARKHNMCGETEEEKIRMDILENQAMDVRLQMARICYSPDF 445
PYLIDG+HK+TQSNAILRY+ARKHN+CGETEEE+IR+DILENQAMD R+Q+A +CYSPDF
Sbjct: 61 PYLIDGSHKITQSNAILRYLARKHNLCGETEEERIRVDILENQAMDTRIQLAMVCYSPDF 120
Query: 446 EKLKPGYLKEIPEKMKPFSEFLGKRPWFAGDKLTYVDFLAYDVLDLYRIFDPKCLDEFPN 625
EK KP YL+ +PEKMK +SEFLGK+PWFAG+K+TYVDFL YDVLD +RIF+PKCLD FPN
Sbjct: 121 EKKKPEYLEGLPEKMKLYSEFLGKQPWFAGNKVTYVDFLVYDVLDQHRIFEPKCLDAFPN 180
Query: 626 LKAFLSRFEGLERISAYMRSSRFLPHPVYSKMAMWGNK 739
LK F+ RFEGL++IS YM+SSRFL P+++KMA W K
Sbjct: 181 LKDFMGRFEGLKKISDYMKSSRFLSKPIFAKMAFWNPK 218
>ref|NP_034488.1| glutathione S-transferase Mu 1 [Mus musculus].
Length = 218
Score = 364 bits (935), Expect = e-101
Identities = 163/218 (74%), Positives = 198/218 (90%)
Frame = +2
Query: 86 MTMILGYWDIRGLAHAIRLLLEYTDSSYEEKKYTLGDAPDYDRSQWLSDKFKLGLDFPNL 265
M MILGYW++RGL H IR+LLEYTDSSY+EK+YT+GDAPD+DRSQWL++KFKLGLDFPNL
Sbjct: 1 MPMILGYWNVRGLTHPIRMLLEYTDSSYDEKRYTMGDAPDFDRSQWLNEKFKLGLDFPNL 60
Query: 266 PYLIDGAHKLTQSNAILRYIARKHNMCGETEEEKIRMDILENQAMDVRLQMARICYSPDF 445
PYLIDG+HK+TQSNAILRY+ARKH++ GETEEE+IR DI+ENQ MD R+Q+ +CY+PDF
Sbjct: 61 PYLIDGSHKITQSNAILRYLARKHHLDGETEEERIRADIVENQVMDTRMQLIMLCYNPDF 120
Query: 446 EKLKPGYLKEIPEKMKPFSEFLGKRPWFAGDKLTYVDFLAYDVLDLYRIFDPKCLDEFPN 625
EK KP +LK IPEKMK +SEFLGKRPWFAGDK+TYVDFLAYD+LD YR+F+PKCLD FPN
Sbjct: 121 EKQKPEFLKTIPEKMKLYSEFLGKRPWFAGDKVTYVDFLAYDILDQYRMFEPKCLDAFPN 180
Query: 626 LKAFLSRFEGLERISAYMRSSRFLPHPVYSKMAMWGNK 739
L+ FL+RFEGL++ISAYM+SSR++ P++SKMA W NK
Sbjct: 181 LRDFLARFEGLKKISAYMKSSRYIATPIFSKMAHWSNK 218
>ref|NP_081040.1| glutathione S-transferase mu 4 isoform 1 [Mus musculus].
Length = 218
Score = 364 bits (935), Expect = e-101
Identities = 169/218 (77%), Positives = 198/218 (90%)
Frame = +2
Query: 86 MTMILGYWDIRGLAHAIRLLLEYTDSSYEEKKYTLGDAPDYDRSQWLSDKFKLGLDFPNL 265
M M LGYWDIRGLAHAIRLLLEYT SSYEEK+YT+GDAPDYDRSQWLS+KFKLGLDFPNL
Sbjct: 1 MPMTLGYWDIRGLAHAIRLLLEYTGSSYEEKRYTMGDAPDYDRSQWLSEKFKLGLDFPNL 60
Query: 266 PYLIDGAHKLTQSNAILRYIARKHNMCGETEEEKIRMDILENQAMDVRLQMARICYSPDF 445
PYLIDG+HK+TQSNAILRYIARKHN+CGETEEEKIR+DILENQAMDV Q+AR+CYSPDF
Sbjct: 61 PYLIDGSHKITQSNAILRYIARKHNLCGETEEEKIRVDILENQAMDVSNQLARVCYSPDF 120
Query: 446 EKLKPGYLKEIPEKMKPFSEFLGKRPWFAGDKLTYVDFLAYDVLDLYRIFDPKCLDEFPN 625
EKLK YL+++P +K FS+FLG+R WF G+K+T+VDFLAYD+LDL+ IF+P CLD FPN
Sbjct: 121 EKLKVEYLEQLPGMVKLFSQFLGQRTWFVGEKITFVDFLAYDILDLHLIFEPTCLDAFPN 180
Query: 626 LKAFLSRFEGLERISAYMRSSRFLPHPVYSKMAMWGNK 739
LK F++RFE L+RISAYM++SRFL P+Y+K+A WGNK
Sbjct: 181 LKDFVARFEVLKRISAYMKTSRFLRTPLYTKVATWGNK 218
>ref|NP_034489.1| glutathione S-transferase Mu 3 [Mus musculus].
Length = 218
Score = 363 bits (932), Expect = e-100
Identities = 164/216 (75%), Positives = 194/216 (89%)
Frame = +2
Query: 86 MTMILGYWDIRGLAHAIRLLLEYTDSSYEEKKYTLGDAPDYDRSQWLSDKFKLGLDFPNL 265
M M LGYW+ RGL H+IRLLLEYTDSSYEEK+Y +GDAP++DRSQWLS+KF LGLDFPNL
Sbjct: 1 MPMTLGYWNTRGLTHSIRLLLEYTDSSYEEKRYVMGDAPNFDRSQWLSEKFNLGLDFPNL 60
Query: 266 PYLIDGAHKLTQSNAILRYIARKHNMCGETEEEKIRMDILENQAMDVRLQMARICYSPDF 445
PYLIDG+HK+TQSNAILRY+ RKHN+CGETEEE+IR+D LENQ MD R+Q+ +C SPDF
Sbjct: 61 PYLIDGSHKVTQSNAILRYLGRKHNLCGETEEERIRVDTLENQVMDTRIQLMIVCCSPDF 120
Query: 446 EKLKPGYLKEIPEKMKPFSEFLGKRPWFAGDKLTYVDFLAYDVLDLYRIFDPKCLDEFPN 625
EK KP +LK IPEKMK +SEFLGKRPWFAGDK+TYVDFLAYD+LD YR+F+PKCLD FPN
Sbjct: 121 EKQKPEFLKAIPEKMKLYSEFLGKRPWFAGDKVTYVDFLAYDILDQYRMFEPKCLDAFPN 180
Query: 626 LKAFLSRFEGLERISAYMRSSRFLPHPVYSKMAMWG 733
L+ FL+RFEGL++ISAYM+SSRFLP PV++K+A WG
Sbjct: 181 LRDFLARFEGLKKISAYMKSSRFLPRPVFTKIAQWG 216
>ref|NP_080948.2| glutathione S-transferase Mu 7 [Mus musculus].
Length = 218
Score = 361 bits (927), Expect = e-100
Identities = 161/217 (74%), Positives = 198/217 (91%)
Frame = +2
Query: 86 MTMILGYWDIRGLAHAIRLLLEYTDSSYEEKKYTLGDAPDYDRSQWLSDKFKLGLDFPNL 265
M M LGYWDIRGLAHAIRL LEYTDSSYEEK+YT+GDAPDYD+SQWL++KFKLGLDFPNL
Sbjct: 1 MPMTLGYWDIRGLAHAIRLFLEYTDSSYEEKRYTMGDAPDYDQSQWLNEKFKLGLDFPNL 60
Query: 266 PYLIDGAHKLTQSNAILRYIARKHNMCGETEEEKIRMDILENQAMDVRLQMARICYSPDF 445
PYLIDG+HK+TQSNAILRY+ RKHN+CGETEEE+IR+DILENQ MD R+ +AR+CY+ DF
Sbjct: 61 PYLIDGSHKITQSNAILRYLGRKHNLCGETEEERIRVDILENQLMDNRMVLARLCYNADF 120
Query: 446 EKLKPGYLKEIPEKMKPFSEFLGKRPWFAGDKLTYVDFLAYDVLDLYRIFDPKCLDEFPN 625
EKLKPGYL+++P M+ +SEFLGKRPWFAGDK+T+VDF+AYDVL+ ++F+ KCLD FPN
Sbjct: 121 EKLKPGYLEQLPGMMRLYSEFLGKRPWFAGDKITFVDFIAYDVLERNQVFEAKCLDAFPN 180
Query: 626 LKAFLSRFEGLERISAYMRSSRFLPHPVYSKMAMWGN 736
LK F++RFEGL++IS YM++SRFLP P+++KMA WG+
Sbjct: 181 LKDFIARFEGLKKISDYMKTSRFLPRPMFTKMATWGS 217
>ref|NP_032210.3| glutathione S-transferase Mu 6 [Mus musculus].
Length = 218
Score = 353 bits (907), Expect = 9e-98
Identities = 158/218 (72%), Positives = 190/218 (87%)
Frame = +2
Query: 86 MTMILGYWDIRGLAHAIRLLLEYTDSSYEEKKYTLGDAPDYDRSQWLSDKFKLGLDFPNL 265
M + LGYWDIRGL HAIRLLLEYT++ YEEK+Y +GDAPDYDRSQWL+DKFKL LDFPNL
Sbjct: 1 MPVTLGYWDIRGLGHAIRLLLEYTETGYEEKRYAMGDAPDYDRSQWLNDKFKLDLDFPNL 60
Query: 266 PYLIDGAHKLTQSNAILRYIARKHNMCGETEEEKIRMDILENQAMDVRLQMARICYSPDF 445
PYLIDG+HK+TQSNAILRY+ RKHN+CGETEEE+IR+DILE Q MD R+QM +CYS DF
Sbjct: 61 PYLIDGSHKVTQSNAILRYLGRKHNLCGETEEERIRVDILEKQVMDTRIQMGMLCYSADF 120
Query: 446 EKLKPGYLKEIPEKMKPFSEFLGKRPWFAGDKLTYVDFLAYDVLDLYRIFDPKCLDEFPN 625
EK KP +LK +P+++K +SEFLGK+PWFAGDK+T+ DFL YDVLD +R+F+P CLD FPN
Sbjct: 121 EKRKPEFLKGLPDQLKLYSEFLGKQPWFAGDKITFADFLVYDVLDQHRMFEPTCLDAFPN 180
Query: 626 LKAFLSRFEGLERISAYMRSSRFLPHPVYSKMAMWGNK 739
LK F++RFEGL +ISAYM++SRFLP PVY K A WGN+
Sbjct: 181 LKDFMARFEGLRKISAYMKTSRFLPSPVYLKQATWGNE 218
>ref|NP_034490.1| glutathione S-transferase Mu 5 [Mus musculus].
Length = 224
Score = 338 bits (868), Expect = 3e-93
Identities = 154/217 (70%), Positives = 188/217 (86%)
Frame = +2
Query: 89 TMILGYWDIRGLAHAIRLLLEYTDSSYEEKKYTLGDAPDYDRSQWLSDKFKLGLDFPNLP 268
+M+LGYWDIRGLAHAIR+LLE+TD+SYEEK+Y G+APDYDRSQWL KFKL LDFPNLP
Sbjct: 5 SMVLGYWDIRGLAHAIRMLLEFTDTSYEEKRYICGEAPDYDRSQWLDVKFKLDLDFPNLP 64
Query: 269 YLIDGAHKLTQSNAILRYIARKHNMCGETEEEKIRMDILENQAMDVRLQMARICYSPDFE 448
YL+DG +K+TQSNAILRYIARKHNMCG+TEEEKIR+DI+ENQ MD R+Q+ R+CY+ + E
Sbjct: 65 YLMDGKNKITQSNAILRYIARKHNMCGDTEEEKIRVDIMENQIMDFRMQLVRLCYNSNHE 124
Query: 449 KLKPGYLKEIPEKMKPFSEFLGKRPWFAGDKLTYVDFLAYDVLDLYRIFDPKCLDEFPNL 628
LKP YL+++P ++K FS FLGK WFAG+KLT+VDFL YDVLD RIF+PKCLDEFPNL
Sbjct: 125 NLKPQYLEQLPAQLKQFSLFLGKFTWFAGEKLTFVDFLTYDVLDQNRIFEPKCLDEFPNL 184
Query: 629 KAFLSRFEGLERISAYMRSSRFLPHPVYSKMAMWGNK 739
KAF+ RFE LE+I+A+++S RF P+ +KMA WGNK
Sbjct: 185 KAFMCRFEALEKIAAFLQSDRFFKMPINNKMAKWGNK 221
>ref|NP_001153883.1| glutathione S-transferase mu 4 isoform 2 [Mus musculus].
Length = 184
Score = 303 bits (777), Expect = 1e-82
Identities = 139/184 (75%), Positives = 167/184 (90%)
Frame = +2
Query: 188 LGDAPDYDRSQWLSDKFKLGLDFPNLPYLIDGAHKLTQSNAILRYIARKHNMCGETEEEK 367
+GDAPDYDRSQWLS+KFKLGLDFPNLPYLIDG+HK+TQSNAILRYIARKHN+CGETEEEK
Sbjct: 1 MGDAPDYDRSQWLSEKFKLGLDFPNLPYLIDGSHKITQSNAILRYIARKHNLCGETEEEK 60
Query: 368 IRMDILENQAMDVRLQMARICYSPDFEKLKPGYLKEIPEKMKPFSEFLGKRPWFAGDKLT 547
IR+DILENQAMDV Q+AR+CYSPDFEKLK YL+++P +K FS+FLG+R WF G+K+T
Sbjct: 61 IRVDILENQAMDVSNQLARVCYSPDFEKLKVEYLEQLPGMVKLFSQFLGQRTWFVGEKIT 120
Query: 548 YVDFLAYDVLDLYRIFDPKCLDEFPNLKAFLSRFEGLERISAYMRSSRFLPHPVYSKMAM 727
+VDFLAYD+LDL+ IF+P CLD FPNLK F++RFE L+RISAYM++SRFL P+Y+K+A
Sbjct: 121 FVDFLAYDILDLHLIFEPTCLDAFPNLKDFVARFEVLKRISAYMKTSRFLRTPLYTKVAT 180
Query: 728 WGNK 739
WGNK
Sbjct: 181 WGNK 184
>ref|XP_136255.4| PREDICTED: glutathione S-transferase Mu 1-like [Mus musculus].
Length = 196
Score = 266 bits (680), Expect = 2e-71
Identities = 133/204 (65%), Positives = 162/204 (79%)
Frame = +2
Query: 86 MTMILGYWDIRGLAHAIRLLLEYTDSSYEEKKYTLGDAPDYDRSQWLSDKFKLGLDFPNL 265
M M L YWDI GLAHAI LLLEYTDS YEEK+YT+ D P YDRSQWLS+ FKLGL+F NL
Sbjct: 1 MPMTLCYWDIHGLAHAIWLLLEYTDSCYEEKRYTMRDPPKYDRSQWLSE-FKLGLEFFNL 59
Query: 266 PYLIDGAHKLTQSNAILRYIARKHNMCGETEEEKIRMDILENQAMDVRLQMARICYSPDF 445
PYLIDG+HK+TQSNAILRY ARK+N+CGETEE K R++IL+NQ MDV Q+ R+CYSPDF
Sbjct: 60 PYLIDGSHKITQSNAILRYTARKNNLCGETEE-KSRVEILKNQVMDVSSQLGRVCYSPDF 118
Query: 446 EKLKPGYLKEIPEKMKPFSEFLGKRPWFAGDKLTYVDFLAYDVLDLYRIFDPKCLDEFPN 625
EKLK YL ++ S+FLGKR WF +K+T+VDFLAYD+LD + IF+P CLD F N
Sbjct: 119 EKLKAEYLVQLS------SQFLGKRTWFVSEKITFVDFLAYDILDRHLIFEPTCLDAFLN 172
Query: 626 LKAFLSRFEGLERISAYMRSSRFL 697
LK F++ E L+++S YM++S FL
Sbjct: 173 LKDFVACVEELKKMSDYMKTSYFL 196
>ref|XP_920855.1| PREDICTED: glutathione S-transferase Mu 1-like [Mus musculus].
Length = 196
Score = 266 bits (680), Expect = 2e-71
Identities = 133/204 (65%), Positives = 162/204 (79%)
Frame = +2
Query: 86 MTMILGYWDIRGLAHAIRLLLEYTDSSYEEKKYTLGDAPDYDRSQWLSDKFKLGLDFPNL 265
M M L YWDI GLAHAI LLLEYTDS YEEK+YT+ D P YDRSQWLS+ FKLGL+F NL
Sbjct: 1 MPMTLCYWDIHGLAHAIWLLLEYTDSCYEEKRYTMRDPPKYDRSQWLSE-FKLGLEFFNL 59
Query: 266 PYLIDGAHKLTQSNAILRYIARKHNMCGETEEEKIRMDILENQAMDVRLQMARICYSPDF 445
PYLIDG+HK+TQSNAILRY ARK+N+CGETEE K R++IL+NQ MDV Q+ R+CYSPDF
Sbjct: 60 PYLIDGSHKITQSNAILRYTARKNNLCGETEE-KSRVEILKNQVMDVSSQLGRVCYSPDF 118
Query: 446 EKLKPGYLKEIPEKMKPFSEFLGKRPWFAGDKLTYVDFLAYDVLDLYRIFDPKCLDEFPN 625
EKLK YL ++ S+FLGKR WF +K+T+VDFLAYD+LD + IF+P CLD F N
Sbjct: 119 EKLKAEYLVQLS------SQFLGKRTWFVSEKITFVDFLAYDILDRHLIFEPTCLDAFLN 172
Query: 626 LKAFLSRFEGLERISAYMRSSRFL 697
LK F++ E L+++S YM++S FL
Sbjct: 173 LKDFVACVEELKKMSDYMKTSYFL 196
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 36,312,856
Number of extensions: 1088462
Number of successful extensions: 3851
Number of sequences better than 1.0e-05: 23
Number of HSP's gapped: 3818
Number of HSP's successfully gapped: 23
Length of query: 337
Length of database: 15,617,559
Length adjustment: 102
Effective length of query: 235
Effective length of database: 12,553,887
Effective search space: 2950163445
Effective search space used: 2950163445
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002213
(1013 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001072152.1| glutathione S-transferase mu 2 [Sus scrofa]. 453 e-128
Alignment gi|XP_001924094.2| PREDICTED: glutathione S-transferase Mu 1-li... 374 e-104
Alignment gi|XP_003125913.1| PREDICTED: glutathione S-transferase Mu 5-li... 350 5e-97
Alignment gi|XP_003122501.1| PREDICTED: glutathione S-transferase P 1-lik... 95 7e-20
Alignment gi|XP_003357127.1| PREDICTED: hematopoietic prostaglandin D syn... 72 5e-13
Alignment gi|XP_003128840.1| PREDICTED: glutathione S-transferase A1-like... 69 5e-12
Alignment gi|XP_003128841.1| PREDICTED: glutathione S-transferase A4-like... 65 5e-11
Alignment gi|XP_003356871.1| PREDICTED: glutathione S-transferase A4-like... 65 5e-11
Alignment gi|NP_999554.1| glutathione S-transferase alpha M14 [Sus scrofa]. 60 1e-09
Alignment gi|NP_999015.1| glutathione S-transferase A2 [Sus scrofa]. 60 2e-09
>ref|NP_001072152.1| glutathione S-transferase mu 2 [Sus scrofa].
Length = 218
Score = 453 bits (1166), Expect = e-128
Identities = 217/218 (99%), Positives = 218/218 (100%)
Frame = +2
Query: 86 MTMILGYWDIRGLAHAIRLLLEYTDSSYEEKKYTLGDAPDYDRSQWLSDKFKLGLDFPNL 265
MTMILGYWDIRGLAHAIRLLLEYTDSSYEEKKYT+GDAPDYDRSQWLSDKFKLGLDFPNL
Sbjct: 1 MTMILGYWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLSDKFKLGLDFPNL 60
Query: 266 PYLIDGAHKLTQSNAILRYIARKHNMCGETEEEKIRMDILENQAMDVRLQMARICYSPDF 445
PYLIDGAHKLTQSNAILRYIARKHNMCGETEEEKIRMDILENQAMDVRLQMARICYSPDF
Sbjct: 61 PYLIDGAHKLTQSNAILRYIARKHNMCGETEEEKIRMDILENQAMDVRLQMARICYSPDF 120
Query: 446 EKLKPGYLKEIPEKMKPFSEFLGKRPWFAGDKLTYVDFLAYDVLDLYRIFDPKCLDEFPN 625
EKLKPGYLKEIPEKMKPFSEFLGKRPWFAGDKLTYVDFLAYDVLDLYRIFDPKCLDEFPN
Sbjct: 121 EKLKPGYLKEIPEKMKPFSEFLGKRPWFAGDKLTYVDFLAYDVLDLYRIFDPKCLDEFPN 180
Query: 626 LKAFLSRFEGLERISAYMRSSRFLPHPVYSKMAMWGNK 739
LKAFLSRFEGLERISAYMRSSRFLPHPVYSKMAMWGNK
Sbjct: 181 LKAFLSRFEGLERISAYMRSSRFLPHPVYSKMAMWGNK 218
>ref|XP_001924094.2| PREDICTED: glutathione S-transferase Mu 1-like [Sus scrofa].
Length = 389
Score = 374 bits (961), Expect = e-104
Identities = 173/214 (80%), Positives = 197/214 (92%)
Frame = +2
Query: 98 LGYWDIRGLAHAIRLLLEYTDSSYEEKKYTLGDAPDYDRSQWLSDKFKLGLDFPNLPYLI 277
LGYWDIRGLAHAIRLLLEYT S+YEE+KY +GD PDYDRSQWL+++ KLGLDFPNLPYLI
Sbjct: 176 LGYWDIRGLAHAIRLLLEYTGSNYEERKYMMGDPPDYDRSQWLNERSKLGLDFPNLPYLI 235
Query: 278 DGAHKLTQSNAILRYIARKHNMCGETEEEKIRMDILENQAMDVRLQMARICYSPDFEKLK 457
DG HKLTQSNAILRYIARKHNMCGETE+EKI++DILE+Q MDVRL MAR+CYS DFEKLK
Sbjct: 236 DGPHKLTQSNAILRYIARKHNMCGETEKEKIQVDILESQVMDVRLHMARVCYSSDFEKLK 295
Query: 458 PGYLKEIPEKMKPFSEFLGKRPWFAGDKLTYVDFLAYDVLDLYRIFDPKCLDEFPNLKAF 637
PGY+ EIPEKM+ FS FLGK PWFAG LTYVDFLAYD+LDL+RIF+PKCLDEFPNLK F
Sbjct: 296 PGYVDEIPEKMRLFSAFLGKGPWFAGHTLTYVDFLAYDILDLHRIFEPKCLDEFPNLKDF 355
Query: 638 LSRFEGLERISAYMRSSRFLPHPVYSKMAMWGNK 739
++RFEGL++ISAYM+SSRFLP P++ K+AMWGNK
Sbjct: 356 ITRFEGLKKISAYMKSSRFLPRPLFLKIAMWGNK 389
>ref|XP_003125913.1| PREDICTED: glutathione S-transferase Mu 5-like [Sus scrofa].
Length = 225
Score = 350 bits (899), Expect = 5e-97
Identities = 161/217 (74%), Positives = 191/217 (88%)
Frame = +2
Query: 89 TMILGYWDIRGLAHAIRLLLEYTDSSYEEKKYTLGDAPDYDRSQWLSDKFKLGLDFPNLP 268
+M+LGYWDIRGLAHAIR+LLE+TD+SYEEK+Y G+APDYDRSQWL K+KL LDFPNLP
Sbjct: 6 SMVLGYWDIRGLAHAIRMLLEFTDTSYEEKRYICGEAPDYDRSQWLDVKYKLDLDFPNLP 65
Query: 269 YLIDGAHKLTQSNAILRYIARKHNMCGETEEEKIRMDILENQAMDVRLQMARICYSPDFE 448
YL+DG +KLTQSNAILRYIARKHNMCGETEEEKIR+DI+ENQ MD R+Q+ R+CYSPD E
Sbjct: 66 YLMDGKNKLTQSNAILRYIARKHNMCGETEEEKIRVDIMENQIMDFRMQLIRLCYSPDHE 125
Query: 449 KLKPGYLKEIPEKMKPFSEFLGKRPWFAGDKLTYVDFLAYDVLDLYRIFDPKCLDEFPNL 628
KLKP YL+++P ++K FS FLGK WFAG+KLT+VDFL YDVLD RIF+P+CLDEFPNL
Sbjct: 126 KLKPQYLEQLPGQLKQFSLFLGKYSWFAGEKLTFVDFLTYDVLDQNRIFEPRCLDEFPNL 185
Query: 629 KAFLSRFEGLERISAYMRSSRFLPHPVYSKMAMWGNK 739
KAF+ RFE LE+I+AYM+S RFL P+ +KMA WGNK
Sbjct: 186 KAFMCRFEALEKIAAYMQSDRFLKMPINNKMAQWGNK 222
>ref|XP_003122501.1| PREDICTED: glutathione S-transferase P 1-like [Sus scrofa].
Length = 239
Score = 94.7 bits (234), Expect = 7e-20
Identities = 58/210 (27%), Positives = 105/210 (50%), Gaps = 7/210 (3%)
Frame = +2
Query: 104 YWDIRGLAHAIRLLLEYTDSSYEEKKYTLGDAPDYDRSQWLSDKFKLGLDFPNLPYLIDG 283
Y+ RG A+R+LL S++E+ T + WL K + LP DG
Sbjct: 37 YFPARGRCEAMRMLLADQGQSWKEEVVT--------KETWLQGPLKATCLYGQLPKFQDG 88
Query: 284 AHKLTQSNAILRYIARKHNMCGETEEEKIRMDILENQAMDVRLQMARIC---YSPDFEKL 454
L QSNAILR++ R + G+ E +D++ + D+R R+C ++E+
Sbjct: 89 DLTLYQSNAILRHLGRSLGLYGKDLREAALLDMVNDGVEDLR----RLCSHLIRHNYEED 144
Query: 455 KPGYLKEIPEKMKPFSEFL----GKRPWFAGDKLTYVDFLAYDVLDLYRIFDPKCLDEFP 622
K Y++E+P ++PF L G + + G ++++ D+ D+L +++ P CLD FP
Sbjct: 145 KARYVEELPGHLRPFETLLSQNQGGQAFIVGSQISFADYNLLDLLLSHQVLVPSCLDAFP 204
Query: 623 NLKAFLSRFEGLERISAYMRSSRFLPHPVY 712
L A+++R ++ A++ S + P++
Sbjct: 205 LLSAYVARLSARPKLKAFLASPEHVNRPIF 234
>ref|XP_003357127.1| PREDICTED: hematopoietic prostaglandin D synthase-like [Sus
scrofa].
Length = 199
Score = 72.0 bits (175), Expect = 5e-13
Identities = 52/201 (25%), Positives = 95/201 (47%), Gaps = 6/201 (2%)
Frame = +2
Query: 98 LGYWDIRGLAHAIRLLLEYTDSSYEEKKYTLGDAPDYDRSQWLSDKFKLGLDFPNLPYL- 274
L Y+++RG A IR + Y D YE+ + D P + K L F +P L
Sbjct: 6 LTYFNMRGRAEIIRYIFAYLDIKYEDHRIEQADWP----------QIKPTLPFGKIPILE 55
Query: 275 IDGAHKLTQSNAILRYIARKHNMCGETEEEKIRMDILENQAMDVRLQMARICYSPDFEKL 454
+DG + L QS AI RY+A+ ++ G+T+ E+ ++D + + D M+ ++ + +
Sbjct: 56 VDGLN-LHQSLAIARYLAKNTDLAGKTDLEQCQVDAIVDTLDDF---MSCFPWAEKKQDV 111
Query: 455 KPGYLKEI-----PEKMKPFSEFLGKRPWFAGDKLTYVDFLAYDVLDLYRIFDPKCLDEF 619
K E+ P ++ +LG++ WF G+ +T+ DF +F P LD
Sbjct: 112 KDQIFNELLTCEAPHLLQDLDTYLGEKEWFIGNSVTWADFYWEICSTTLLVFKPDLLDIH 171
Query: 620 PNLKAFLSRFEGLERISAYMR 682
P L + + + I+ +++
Sbjct: 172 PRLVTLRKKVQSIPAIANWIQ 192
>ref|XP_003128840.1| PREDICTED: glutathione S-transferase A1-like [Sus scrofa].
Length = 223
Score = 68.6 bits (166), Expect = 5e-12
Identities = 60/205 (29%), Positives = 91/205 (44%), Gaps = 10/205 (4%)
Frame = +2
Query: 98 LGYWDIRGLAHAIRLLLEYTDSSYEEKKYTLGDAPDYDRSQWLSDKFKLGLD----FPNL 265
L Y+D RG A IR LL +EEK L D KL D F +
Sbjct: 7 LHYFDGRGRAEVIRWLLASAGVEFEEKFVDT-----------LEDLEKLRNDGSLMFQQV 55
Query: 266 PYLIDGAHKLTQSNAILRYIARKHNMCGETEEEKIRMDILENQAMDV--RLQMARICYSP 439
P + KL Q+ AIL YIA K+++CG+ +E+ +D+ D+ + + IC P
Sbjct: 56 PMIEIDGMKLVQTRAILNYIATKYDLCGKDIKERAAVDMYTEGIADIGEMIMLLPIC-PP 114
Query: 440 DFEKLKPGYLKE-IPEKMKPFSEFLGK---RPWFAGDKLTYVDFLAYDVLDLYRIFDPKC 607
D + K +KE + P E + K + + G+KL+ D ++L DP
Sbjct: 115 DEKDAKMALIKERVSNHYLPAFEKVLKSHGQDYLVGNKLSRADIQLVELLYYVEELDPSL 174
Query: 608 LDEFPNLKAFLSRFEGLERISAYMR 682
L FP LKA +R L + +++
Sbjct: 175 LANFPLLKALKTRVSNLPTVKKFLQ 199
>ref|XP_003128841.1| PREDICTED: glutathione S-transferase A4-like [Sus scrofa].
Length = 222
Score = 65.5 bits (158), Expect = 5e-11
Identities = 54/202 (26%), Positives = 95/202 (47%), Gaps = 7/202 (3%)
Frame = +2
Query: 98 LGYWDIRGLAHAIRLLLEYTDSSYEEKKYTLGDAPDYDRSQWLSDKFKLGLDFPNLPYLI 277
L Y+ RG +IR LL +EE+ + R Q+ K L F +P +
Sbjct: 7 LYYFRGRGRMESIRWLLAAAGVEFEEEFFET-------REQYEKLKKDGLLLFGQVPLVE 59
Query: 278 DGAHKLTQSNAILRYIARKHNMCGETEEEKIRMDILENQAMDVRLQMARICYSPDFEKLK 457
LTQ+ AIL Y+A K+N+ G+ +E++R+D+ + +D+ + +A + P EK +
Sbjct: 60 IDGMALTQTRAILSYLAAKYNLHGKDLKERVRIDMYADGTLDLMMMVALAAFKPPGEKEE 119
Query: 458 PGYLKEIPEKMK----PFSEFLGK---RPWFAGDKLTYVDFLAYDVLDLYRIFDPKCLDE 616
L + EK K P E + K + G+K ++ D + + + D L +
Sbjct: 120 --NLALVVEKAKTRYFPVFEKILKDQGEDFLVGNKFSWADIQLLEAILMMEELDASVLSD 177
Query: 617 FPNLKAFLSRFEGLERISAYMR 682
FP L+AF +R + I +++
Sbjct: 178 FPLLQAFKTRISNIPTIKKFLQ 199
>ref|XP_003356871.1| PREDICTED: glutathione S-transferase A4-like [Sus scrofa].
Length = 222
Score = 65.5 bits (158), Expect = 5e-11
Identities = 54/202 (26%), Positives = 95/202 (47%), Gaps = 7/202 (3%)
Frame = +2
Query: 98 LGYWDIRGLAHAIRLLLEYTDSSYEEKKYTLGDAPDYDRSQWLSDKFKLGLDFPNLPYLI 277
L Y+ RG +IR LL +EE+ + R Q+ K L F +P +
Sbjct: 7 LYYFRGRGRMESIRWLLAAAGVEFEEEFFET-------REQYEKLKKDGLLLFGQVPLVE 59
Query: 278 DGAHKLTQSNAILRYIARKHNMCGETEEEKIRMDILENQAMDVRLQMARICYSPDFEKLK 457
LTQ+ AIL Y+A K+N+ G+ +E++R+D+ + +D+ + +A + P EK +
Sbjct: 60 IDGMALTQTRAILSYLAAKYNLHGKDLKERVRIDMYADGTLDLMMMVALAAFKPPGEKEE 119
Query: 458 PGYLKEIPEKMK----PFSEFLGK---RPWFAGDKLTYVDFLAYDVLDLYRIFDPKCLDE 616
L + EK K P E + K + G+K ++ D + + + D L +
Sbjct: 120 --NLALVVEKAKTRYFPVFEKILKDQGEDFLVGNKFSWADIQLLEAILMMEELDASVLSD 177
Query: 617 FPNLKAFLSRFEGLERISAYMR 682
FP L+AF +R + I +++
Sbjct: 178 FPLLQAFKTRISNIPTIKKFLQ 199
>ref|NP_999554.1| glutathione S-transferase alpha M14 [Sus scrofa].
Length = 222
Score = 60.5 bits (145), Expect = 1e-09
Identities = 58/213 (27%), Positives = 93/213 (43%), Gaps = 5/213 (2%)
Frame = +2
Query: 95 ILGYWDIRGLAHAIRLLLEYTDSSYEEKKYTLGDAPDYDRSQWLSDKFKLGLDFPNLPYL 274
IL Y++ RG IR LL +EEK + D + +D L F +P +
Sbjct: 6 ILHYFNGRGRMECIRWLLAAAGVEFEEKFIKTPE----DLDKLTNDGSLL---FQQVPMV 58
Query: 275 IDGAHKLTQSNAILRYIARKHNMCGETEEEKIRMDILENQAMDVRLQMARICYSPDFEK- 451
KL Q+ AIL YIA K+N+ G+ +E+ +D+ D+ + + P EK
Sbjct: 59 EIDGMKLVQTRAILNYIATKYNLYGKDAKERALIDMYTEGVADLGEMILLLPLCPPNEKD 118
Query: 452 LKPGYLKE-IPEKMKPFSEFLGK---RPWFAGDKLTYVDFLAYDVLDLYRIFDPKCLDEF 619
K +KE + P E + K + + G+KL+ D ++L DP L F
Sbjct: 119 AKVASIKEKSTNRYLPAFEKVLKSHGQDYLVGNKLSRADIQLVELLYYVEELDPSLLANF 178
Query: 620 PNLKAFLSRFEGLERISAYMRSSRFLPHPVYSK 718
P LKA +R L + +++ P+ +K
Sbjct: 179 PLLKALKTRVSNLPTVKKFLQPGSQRKPPMDAK 211
>ref|NP_999015.1| glutathione S-transferase A2 [Sus scrofa].
Length = 223
Score = 60.1 bits (144), Expect = 2e-09
Identities = 57/201 (28%), Positives = 92/201 (45%), Gaps = 5/201 (2%)
Frame = +2
Query: 95 ILGYWDIRGLAHAIRLLLEYTDSSYEEKKYTLGDAPDYDRSQWLSDKFKLGLDFPNLPYL 274
IL Y++ RG IR LL +EEK + P+ D ++ +D L F +P +
Sbjct: 6 ILHYFNGRGRMECIRWLLAAAGVEFEEKFI---ENPN-DLNKLTNDGSLL---FQQVPMV 58
Query: 275 IDGAHKLTQSNAILRYIARKHNMCGETEEEKIRMDILENQAMDVRLQMARICYSPDFEK- 451
KL Q+ AIL YIA K+N+ G+ +E+ +D+ D+ + + P EK
Sbjct: 59 EIDGMKLVQTRAILNYIATKYNLYGKDAKERALIDMYTEGVADLGEMILLLPLCPPNEKD 118
Query: 452 LKPGYLKE-IPEKMKPFSEFLGK---RPWFAGDKLTYVDFLAYDVLDLYRIFDPKCLDEF 619
K +KE + P E + K + + G+KL+ D ++L DP L F
Sbjct: 119 AKVASIKEKSTNRYLPAFEKVLKSHGQDYLVGNKLSRADIQLVELLYYVEELDPSLLANF 178
Query: 620 PNLKAFLSRFEGLERISAYMR 682
P LKA +R L + +++
Sbjct: 179 PLLKALKTRVSNLPTVKKFLQ 199
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 27,186,847
Number of extensions: 841743
Number of successful extensions: 3154
Number of sequences better than 1.0e-05: 10
Number of HSP's gapped: 3135
Number of HSP's successfully gapped: 10
Length of query: 337
Length of database: 11,343,932
Length adjustment: 100
Effective length of query: 237
Effective length of database: 8,854,232
Effective search space: 2098452984
Effective search space used: 2098452984
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002213
(1013 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr13 622 e-176
Sscrofa_Chr01 611 e-172
gb|GL892901.1| Sus scrofa unplaced genomic scaffold chrU_scaffol... 200 1e-48
Sscrofa_Chr04 170 9e-40
gb|GL896251.1| Sus scrofa unplaced genomic scaffold chrU_scaffold61 145 5e-32
>Sscrofa_Chr13
|| Length = 218635234
Score = 622 bits (314), Expect = e-176
Identities = 611/706 (86%), Gaps = 3/706 (0%)
Strand = Plus / Minus
Query: 101 ggttactgggacatccgcgggctggcccacgccatccgcctgctcctggagtacacagac 160
|||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||
Sbjct: 161088588 ggttactgggacatccgcgggctggctcacgccatccgcctgctcctggaatacacaggt 161088529
Query: 161 tccagctacgaggagaagaagtacacgctgggggacgctcccgactatgacagaagccag 220
|| | || ||||||| ||| |||| | |||| || |||| ||||||||||||||||||
Sbjct: 161088528 tcaaattatgaggagaggaaatacatgatgggagatcctcctgactatgacagaagccag 161088469
Query: 221 tggctgagtgacaaattcaagctgggcctggacttccccaatctgccctacttaattgac 280
||| ||| ||| | || ||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 161088468 tggttgaatgaaagatccaagctgggcctggacttccccaatttgccctacttaattgat 161088409
Query: 281 ggggctcacaagctgacccagagcaatgccatcctgcgctatattgctcgcaagcacaac 340
||| |||||||||| |||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 161088408 gggcctcacaagctcacccagagcaatgccatccttcgctacattgctcgcaagcacaac 161088349
Query: 341 atgtgtggggagacagaggaggagaagattcgaatggacattttggagaaccaagctatg 400
|||||||||||||||||| |||||||||||| | |||||||| |||||| ||| | ||||
Sbjct: 161088348 atgtgtggggagacagagaaggagaagattcaagtggacattctggagagccaggttatg 161088289
Query: 401 gatgtccgtttgcagatggccaggatctgctacagccctgactttgagaaactgaagcct 460
||||| || || || ||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 161088288 gatgtacgcttacacatggccagggtctgctacagctctgactttgagaaactgaagcct 161088229
Query: 461 gggtacttgaaggagatccctgaaaagatgaagcccttctccgagtttctggggaagagg 520
|| || || | ||||||||||| ||||||| || |||||| | |||| |||||||| ||
Sbjct: 161088228 ggttatgtggacgagatccctgagaagatgaggctcttctcagcgtttttggggaagggg 161088169
Query: 521 ccttggtttgcaggggacaagctcacctatgtggatttcctggcttacgatgtccttgac 580
|||||||||||||| ||| |||||||||||| ||||||||||||||||| |||||||
Sbjct: 161088168 ccttggtttgcaggacacacgctcacctatgtagatttcctggcttacgacatccttgat 161088109
Query: 581 ctgtaccgcatattcgatcccaagtgcctggatgaattcccaaacctgaaagccttcctc 640
|| | |||||||| || |||||||||||||||||||||||||||||||||| |||| ||
Sbjct: 161088108 ctacatcgcatatttgagcccaagtgcctggatgaattcccaaacctgaaagacttcatc 161088049
Query: 641 agccgctttgagggcctggagaggatctcagcctacatgaggtccagccgcttcctgcca 700
| |||||||||||| || ||| |||||| || ||||||| ||| || |||||||| |||
Sbjct: 161088048 acccgctttgaggggcttaagaagatctctgcttacatgaagtctagtcgcttcctccca 161087989
Query: 701 caccccgtgtattcaaagatggccatgtggggcaacaagtagtgccctg-aagcaggaga 759
| ||| ||| | |||||| ||||||||||| ||||||||||| |||| || ||||||
Sbjct: 161087988 cgccctttgtttctaaagattgccatgtggggtaacaagtagtggcctgtaaccaggagc 161087929
Query: 760 tggagtgaggag-ca-ggccctggaggacagctggccctccctgca 803
|||||||||||| || |||||||||| | |||||| || |||||||
Sbjct: 161087928 tggagtgaggagtcagggccctggagaagagctggaccaccctgca 161087883
>Sscrofa_Chr01
|| Length = 315321322
Score = 611 bits (308), Expect = e-172
Identities = 351/364 (96%), Gaps = 1/364 (0%)
Strand = Plus / Plus
Query: 651 agggcctggagaggatctcagcctacatgaggtccagccgcttcctgccacaccccgtgt 710
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69719648 agggcctggagaggatctcagcctacatgaggtccagccgcttcctgccacaccccgtgt 69719707
Query: 711 attcaaagatggccatgtggggcaacaagtagtgccctg-aagcaggagatggagtgagg 769
|| ||||| |||||| ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 69719708 atacaaaggtggccacgtggggcaacaagtagtgccctggaagcaggagatggagtgagg 69719767
Query: 770 agcaggccctggaggacagctggccctccctgcagcccacgaccagacgtcttgcttgtc 829
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69719768 agcagaccctggaggacagctggccctccctgcagcccacgaccagacgtcttgcttgtc 69719827
Query: 830 ctccttgttcccatcaggcctcacgtggcccctaagcctttcccaggccacattcaccag 889
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 69719828 ctccttgttcccatcaggcctcacgtggcccctaagcctttcccaggcagcattcaccag 69719887
Query: 890 gatcttgagcgctctgcagcctcctgcccttctgccgtgaagtcagcggctgaaggtatg 949
|||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||
Sbjct: 69719888 gatcttgagcgctctgcagcctcccgcccttctgctgtgaagtcagcggctgaaggtatc 69719947
Query: 950 ctttctgctctgaggccaaccagaccccccttcctttctgtgcttgcgcctgctgtgaac 1009
||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| |
Sbjct: 69719948 ctttctgctctgaggccaaccagacccgccttcctttctgtgcttgctcctgctgtgagc 69720007
Query: 1010 agcc 1013
||||
Sbjct: 69720008 agcc 69720011
>gb|GL892901.1| Sus scrofa unplaced genomic scaffold chrU_scaffold172
Length = 210
Score = 200 bits (101), Expect = 1e-48
Identities = 116/121 (95%)
Strand = Plus / Plus
Query: 1 cctttcatcggcgagcgggtcaggggagaaatttccagggcagcttccctgcagcctctc 60
||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79 cctttcaccagcgagcgggtcaggggagaaatttccagggcagcttccctgcagcctctc 138
Query: 61 ccttcggagctgggacagcagcagcatgacgatgatcctcggttactgggacatccgcgg 120
||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 139 ccttcggagctcagacagcagcaacatgacgatgatcctcggttactgggacatccgcgg 198
Query: 121 g 121
|
Sbjct: 199 g 199
>Sscrofa_Chr04
|| Length = 143465943
Score = 170 bits (86), Expect = 9e-40
Identities = 107/114 (93%)
Strand = Plus / Minus
Query: 540 agctcacctatgtggatttcctggcttacgatgtccttgacctgtaccgcatattcgatc 599
|||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| |
Sbjct: 120784400 agctcacctatgtggatttcctggcttacgatgtccttgaccggaaccgcatattcgaac 120784341
Query: 600 ccaagtgcctggatgaattcccaaacctgaaagccttcctcagccgctttgagg 653
||||||||||||||||||||||||||||||||| |||| ||| ||||||||||
Sbjct: 120784340 ccaagtgcctggatgaattcccaaacctgaaagacttcatcactcgctttgagg 120784287
Score = 143 bits (72), Expect = 2e-31
Identities = 90/96 (93%)
Strand = Plus / Minus
Query: 446 gagaaactgaagcctgggtacttgaaggagatccctgaaaagatgaagcccttctccgag 505
|||||||||||||||||||||||||||||||||||||||| ||||| |||||| |||
Sbjct: 120784580 gagaaactgaagcctgggtacttgaaggagatccctgaaatcctgaagtgcttctctgag 120784521
Query: 506 tttctggggaagaggccttggtttgcaggggacaag 541
||||||||||||||||||||||||||||||||||||
Sbjct: 120784520 tttctggggaagaggccttggtttgcaggggacaag 120784485
Score = 79.8 bits (40), Expect = 3e-12
Identities = 55/60 (91%)
Strand = Plus / Minus
Query: 288 acaagctgacccagagcaatgccatcctgcgctatattgctcgcaagcacaacatgtgtg 347
||||||| |||||||||||||||||| ||||||| || || |||||||||||||||||||
Sbjct: 120828915 acaagctcacccagagcaatgccatcttgcgctacatcgcccgcaagcacaacatgtgtg 120828856
>gb|GL896251.1| Sus scrofa unplaced genomic scaffold chrU_scaffold61
Length = 124
Score = 145 bits (73), Expect = 5e-32
Identities = 76/77 (98%)
Strand = Plus / Minus
Query: 121 gctggcccacgccatccgcctgctcctggagtacacagactccagctacgaggagaagaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110 gctggcccacgccatccgcctgctcctggagtacacagactccagctacgaggagaagaa 51
Query: 181 gtacacgctgggggacg 197
||||||| |||||||||
Sbjct: 50 gtacacgatgggggacg 34
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 29,021,614
Number of extensions: 229
Number of successful extensions: 229
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 227
Number of HSP's successfully gapped: 7
Length of query: 1013
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 992
Effective length of database: 2,808,413,156
Effective search space: 2785945850752
Effective search space used: 2785945850752
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 29 (58.0 bits)