Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002214
(994 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001077241.1| glutathione S-transferase mu 1 [Bos taurus]. 422 e-118
Alignment gi|NP_787019.1| glutathione S-transferase Mu 1 [Bos taurus]. 404 e-113
Alignment gi|NP_001073823.1| glutathione S-transferase mu 1 [Bos taurus]. 379 e-105
Alignment gi|NP_001040025.1| glutathione S-transferase mu 3 [Bos taurus]. 337 1e-92
Alignment gi|XP_002686196.1| PREDICTED: glutathione S-transferase M2 [Bos... 318 5e-87
Alignment gi|XP_886532.1| PREDICTED: glutathione S-transferase M2 isoform... 318 5e-87
Alignment gi|XP_002686197.1| PREDICTED: GSTM2 protein-like [Bos taurus]. 311 6e-85
Alignment gi|XP_002703933.1| PREDICTED: GSTM2 protein-like [Bos taurus]. 311 6e-85
Alignment gi|NP_803482.1| glutathione S-transferase P [Bos taurus]. 100 3e-21
Alignment gi|XP_002699444.1| PREDICTED: glutathione S-transferase, pi 1-l... 97 2e-20
>ref|NP_001077241.1| glutathione S-transferase mu 1 [Bos taurus].
Length = 218
Score = 422 bits (1084), Expect = e-118
Identities = 200/218 (91%), Positives = 208/218 (95%)
Frame = +1
Query: 97 MTMIFGYWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLSDKFKLGLDFPNL 276
M MI GYWDIRGLAHAIRLLLEYTDS+YEEKKYTMGDAPDYDRSQWLS+KF LGLDFPNL
Sbjct: 1 MPMILGYWDIRGLAHAIRLLLEYTDSNYEEKKYTMGDAPDYDRSQWLSEKFTLGLDFPNL 60
Query: 277 PYLIDGAHKLTQSNAILRYIARKHNMCGETEEEKIRVDILENQAMDVRLQMARICYSPDF 456
PYLIDGAHKLTQSNAILRYIARKHNMCGETEEEKIRVDILENQ MDVRL MARICYSPDF
Sbjct: 61 PYLIDGAHKLTQSNAILRYIARKHNMCGETEEEKIRVDILENQTMDVRLHMARICYSPDF 120
Query: 457 EKLKPGYLKEIPEILKCFSEFLGKRPWFAGDKLTYVDFLAYDVLDRNRIFEPKCLDEFPN 636
E LKPG+LKEIPE +K FS+FL KRPWFAGDKLTYVDFLAYDVLDR+RIFEP CLDEFPN
Sbjct: 121 ETLKPGFLKEIPEKMKLFSDFLAKRPWFAGDKLTYVDFLAYDVLDRHRIFEPTCLDEFPN 180
Query: 637 LKDFITRFEGLKKISAYMKSSRFHPNPMFLKIAVWGNK 750
LKDFITRFEGLK+ISAYMKSSRFHPNPMFLK+AVWGNK
Sbjct: 181 LKDFITRFEGLKRISAYMKSSRFHPNPMFLKLAVWGNK 218
>ref|NP_787019.1| glutathione S-transferase Mu 1 [Bos taurus].
Length = 218
Score = 404 bits (1037), Expect = e-113
Identities = 189/218 (86%), Positives = 205/218 (94%)
Frame = +1
Query: 97 MTMIFGYWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLSDKFKLGLDFPNL 276
M MI GYWDIRGLAHAIRLLLEYTD++YEE++Y++GDAPDYDRSQWL++KFKLGLDFPNL
Sbjct: 1 MPMILGYWDIRGLAHAIRLLLEYTDTNYEERQYSVGDAPDYDRSQWLNEKFKLGLDFPNL 60
Query: 277 PYLIDGAHKLTQSNAILRYIARKHNMCGETEEEKIRVDILENQAMDVRLQMARICYSPDF 456
PYLIDG HKLTQSNAILRYIARKHN+CGETEEE IRVDILENQ MDVRL MARICYSPDF
Sbjct: 61 PYLIDGTHKLTQSNAILRYIARKHNLCGETEEEMIRVDILENQVMDVRLAMARICYSPDF 120
Query: 457 EKLKPGYLKEIPEILKCFSEFLGKRPWFAGDKLTYVDFLAYDVLDRNRIFEPKCLDEFPN 636
EKLKPG+LKEIPE +K FSEFLGKRPWFAGDKLTYVDFL YDVLD +RIFEPKCLD FPN
Sbjct: 121 EKLKPGFLKEIPEKIKLFSEFLGKRPWFAGDKLTYVDFLVYDVLDMHRIFEPKCLDAFPN 180
Query: 637 LKDFITRFEGLKKISAYMKSSRFHPNPMFLKIAVWGNK 750
LKDFI+RFEGLKKISAYMKSSRF P P+F+K+AVWGNK
Sbjct: 181 LKDFISRFEGLKKISAYMKSSRFLPGPLFMKLAVWGNK 218
>ref|NP_001073823.1| glutathione S-transferase mu 1 [Bos taurus].
Length = 218
Score = 379 bits (973), Expect = e-105
Identities = 177/218 (81%), Positives = 198/218 (90%)
Frame = +1
Query: 97 MTMIFGYWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLSDKFKLGLDFPNL 276
M M GYWDIRGLAHAIRLLLEYTDS+YEEKKYTMGDAPDYDRSQWL++KFKLGLDFPNL
Sbjct: 1 MAMTLGYWDIRGLAHAIRLLLEYTDSNYEEKKYTMGDAPDYDRSQWLNEKFKLGLDFPNL 60
Query: 277 PYLIDGAHKLTQSNAILRYIARKHNMCGETEEEKIRVDILENQAMDVRLQMARICYSPDF 456
PYLIDGAH+LTQS AILRYIARKHNMCGETEEEKIRVD+LENQ MD ++A +CY+P+F
Sbjct: 61 PYLIDGAHRLTQSKAILRYIARKHNMCGETEEEKIRVDVLENQTMDTANELAILCYNPEF 120
Query: 457 EKLKPGYLKEIPEILKCFSEFLGKRPWFAGDKLTYVDFLAYDVLDRNRIFEPKCLDEFPN 636
EKLK YLKEIP +K +SEFLG+RPWFAGDKLT+VDFL YDVLD +RIFEPKCLD FPN
Sbjct: 121 EKLKSQYLKEIPGKMKLYSEFLGRRPWFAGDKLTFVDFLVYDVLDIHRIFEPKCLDAFPN 180
Query: 637 LKDFITRFEGLKKISAYMKSSRFHPNPMFLKIAVWGNK 750
LKDFI+ FEGLK+ISAYMKSSRF P+P++ K+AVWGNK
Sbjct: 181 LKDFISHFEGLKRISAYMKSSRFLPHPVYSKMAVWGNK 218
>ref|NP_001040025.1| glutathione S-transferase mu 3 [Bos taurus].
Length = 225
Score = 337 bits (864), Expect = 1e-92
Identities = 155/217 (71%), Positives = 188/217 (86%)
Frame = +1
Query: 100 TMIFGYWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLSDKFKLGLDFPNLP 279
+M+ GYWDIRGLAHAIR+LLE+TD+SYEEK+YT G+APDYD+SQWL KFKL LDFPNLP
Sbjct: 6 SMVLGYWDIRGLAHAIRMLLEFTDTSYEEKRYTCGEAPDYDKSQWLDVKFKLDLDFPNLP 65
Query: 280 YLIDGAHKLTQSNAILRYIARKHNMCGETEEEKIRVDILENQAMDVRLQMARICYSPDFE 459
YL+DG ++LTQSNAILRYIARKHNMCG+TEEE+IRVDI+ENQ MD R+Q+ ++CY+PD E
Sbjct: 66 YLMDGKNRLTQSNAILRYIARKHNMCGDTEEERIRVDIMENQIMDFRMQLVQLCYNPDHE 125
Query: 460 KLKPGYLKEIPEILKCFSEFLGKRPWFAGDKLTYVDFLAYDVLDRNRIFEPKCLDEFPNL 639
KLKP YL+++P LK FS FLGK WFAG+KLT+VDFL YDVLD+NR+FEPKCLDEFPNL
Sbjct: 126 KLKPRYLEQLPGQLKQFSLFLGKYSWFAGEKLTFVDFLTYDVLDQNRMFEPKCLDEFPNL 185
Query: 640 KDFITRFEGLKKISAYMKSSRFHPNPMFLKIAVWGNK 750
K F+ RFE L+KI+ YM+S RF P+ K+A WGN+
Sbjct: 186 KAFMCRFEALEKIATYMQSDRFLKMPVNNKMAQWGNR 222
>ref|XP_002686196.1| PREDICTED: glutathione S-transferase M2 [Bos taurus].
Length = 181
Score = 318 bits (815), Expect = 5e-87
Identities = 158/218 (72%), Positives = 169/218 (77%)
Frame = +1
Query: 97 MTMIFGYWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLSDKFKLGLDFPNL 276
M MI GYWDIRGLAHAIRLLLEYTD++YEE++Y++GDAPDYDRSQWL +KFKLGLDFPNL
Sbjct: 1 MPMILGYWDIRGLAHAIRLLLEYTDTNYEERQYSVGDAPDYDRSQWLDEKFKLGLDFPNL 60
Query: 277 PYLIDGAHKLTQSNAILRYIARKHNMCGETEEEKIRVDILENQAMDVRLQMARICYSPDF 456
PYLIDG HKLTQSNAILRYIARKHNMCGETEEE IRVDILENQ MDVR MARICYSPDF
Sbjct: 61 PYLIDGTHKLTQSNAILRYIARKHNMCGETEEEMIRVDILENQVMDVRFAMARICYSPDF 120
Query: 457 EKLKPGYLKEIPEILKCFSEFLGKRPWFAGDKLTYVDFLAYDVLDRNRIFEPKCLDEFPN 636
EKLKPG+LKEIPE +K FSEFLGKRPWFAGDK
Sbjct: 121 EKLKPGFLKEIPEKIKLFSEFLGKRPWFAGDK---------------------------- 152
Query: 637 LKDFITRFEGLKKISAYMKSSRFHPNPMFLKIAVWGNK 750
GLKKISAYMKSSRF P P+FLK+AVWGNK
Sbjct: 153 ---------GLKKISAYMKSSRFLPGPLFLKLAVWGNK 181
>ref|XP_886532.1| PREDICTED: glutathione S-transferase M2 isoform 2 [Bos taurus].
Length = 181
Score = 318 bits (815), Expect = 5e-87
Identities = 158/218 (72%), Positives = 169/218 (77%)
Frame = +1
Query: 97 MTMIFGYWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLSDKFKLGLDFPNL 276
M MI GYWDIRGLAHAIRLLLEYTD++YEE++Y++GDAPDYDRSQWL +KFKLGLDFPNL
Sbjct: 1 MPMILGYWDIRGLAHAIRLLLEYTDTNYEERQYSVGDAPDYDRSQWLDEKFKLGLDFPNL 60
Query: 277 PYLIDGAHKLTQSNAILRYIARKHNMCGETEEEKIRVDILENQAMDVRLQMARICYSPDF 456
PYLIDG HKLTQSNAILRYIARKHNMCGETEEE IRVDILENQ MDVR MARICYSPDF
Sbjct: 61 PYLIDGTHKLTQSNAILRYIARKHNMCGETEEEMIRVDILENQVMDVRFAMARICYSPDF 120
Query: 457 EKLKPGYLKEIPEILKCFSEFLGKRPWFAGDKLTYVDFLAYDVLDRNRIFEPKCLDEFPN 636
EKLKPG+LKEIPE +K FSEFLGKRPWFAGDK
Sbjct: 121 EKLKPGFLKEIPEKIKLFSEFLGKRPWFAGDK---------------------------- 152
Query: 637 LKDFITRFEGLKKISAYMKSSRFHPNPMFLKIAVWGNK 750
GLKKISAYMKSSRF P P+FLK+AVWGNK
Sbjct: 153 ---------GLKKISAYMKSSRFLPGPLFLKLAVWGNK 181
>ref|XP_002686197.1| PREDICTED: GSTM2 protein-like [Bos taurus].
Length = 181
Score = 311 bits (797), Expect = 6e-85
Identities = 157/218 (72%), Positives = 167/218 (76%)
Frame = +1
Query: 97 MTMIFGYWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLSDKFKLGLDFPNL 276
MTMI GYWDIRGLAHAIRLLLEYTDS+Y+EKKYTMGDAPDYDRSQWL++K KLGLDFPNL
Sbjct: 1 MTMILGYWDIRGLAHAIRLLLEYTDSNYKEKKYTMGDAPDYDRSQWLNEKSKLGLDFPNL 60
Query: 277 PYLIDGAHKLTQSNAILRYIARKHNMCGETEEEKIRVDILENQAMDVRLQMARICYSPDF 456
PYLIDG HKLTQSNAILR+IARKHNMCGETEEE IRVD+LENQ MDVRL MARICYSPDF
Sbjct: 61 PYLIDGTHKLTQSNAILRHIARKHNMCGETEEENIRVDLLENQVMDVRLHMARICYSPDF 120
Query: 457 EKLKPGYLKEIPEILKCFSEFLGKRPWFAGDKLTYVDFLAYDVLDRNRIFEPKCLDEFPN 636
EKLKPGYLKEIP +K FS FLGKR WFAG+K
Sbjct: 121 EKLKPGYLKEIPGRMKLFSVFLGKRCWFAGNK---------------------------- 152
Query: 637 LKDFITRFEGLKKISAYMKSSRFHPNPMFLKIAVWGNK 750
GLKKISAYMKSS F P P+FLK+AVWGNK
Sbjct: 153 ---------GLKKISAYMKSSHFLPGPLFLKLAVWGNK 181
>ref|XP_002703933.1| PREDICTED: GSTM2 protein-like [Bos taurus].
Length = 181
Score = 311 bits (797), Expect = 6e-85
Identities = 157/218 (72%), Positives = 167/218 (76%)
Frame = +1
Query: 97 MTMIFGYWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLSDKFKLGLDFPNL 276
MTMI GYWDIRGLAHAIRLLLEYTDS+Y+EKKYTMGDAPDYDRSQWL++K KLGLDFPNL
Sbjct: 1 MTMILGYWDIRGLAHAIRLLLEYTDSNYKEKKYTMGDAPDYDRSQWLNEKSKLGLDFPNL 60
Query: 277 PYLIDGAHKLTQSNAILRYIARKHNMCGETEEEKIRVDILENQAMDVRLQMARICYSPDF 456
PYLIDG HKLTQSNAILR+IARKHNMCGETEEE IRVD+LENQ MDVRL MARICYSPDF
Sbjct: 61 PYLIDGTHKLTQSNAILRHIARKHNMCGETEEENIRVDLLENQVMDVRLHMARICYSPDF 120
Query: 457 EKLKPGYLKEIPEILKCFSEFLGKRPWFAGDKLTYVDFLAYDVLDRNRIFEPKCLDEFPN 636
EKLKPGYLKEIP +K FS FLGKR WFAG+K
Sbjct: 121 EKLKPGYLKEIPGRMKLFSVFLGKRCWFAGNK---------------------------- 152
Query: 637 LKDFITRFEGLKKISAYMKSSRFHPNPMFLKIAVWGNK 750
GLKKISAYMKSS F P P+FLK+AVWGNK
Sbjct: 153 ---------GLKKISAYMKSSHFLPGPLFLKLAVWGNK 181
>ref|NP_803482.1| glutathione S-transferase P [Bos taurus].
Length = 210
Score = 100 bits (248), Expect = 3e-21
Identities = 59/206 (28%), Positives = 103/206 (50%), Gaps = 4/206 (1%)
Frame = +1
Query: 115 YWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLSDKFKLGLDFPNLPYLIDG 294
Y+ ++G A+R+LL S++E+ M WL K + LP DG
Sbjct: 8 YFPVQGRCEAMRMLLADQGQSWKEEVVAM--------QSWLQGPLKASCLYGQLPKFQDG 59
Query: 295 AHKLTQSNAILRYIARKHNMCGETEEEKIRVDILENQAMDVRLQMARICYSPDFEKLKPG 474
L QSNAILR++ R + G+ ++E VD++ + D+R + + Y+ ++E K
Sbjct: 60 DLTLYQSNAILRHLGRTLGLYGKDQQEAALVDMVNDGVEDLRCKYVSLIYT-NYEAGKED 118
Query: 475 YLKEIPEILKCFSEFL----GKRPWFAGDKLTYVDFLAYDVLDRNRIFEPKCLDEFPNLK 642
Y+K +P+ LK F L G + + GD++++ D+ D+L +++ P CLD FP L
Sbjct: 119 YVKALPQHLKPFETLLSQNKGGQAFIVGDQISFADYNLLDLLRIHQVLAPSCLDSFPLLS 178
Query: 643 DFITRFEGLKKISAYMKSSRFHPNPM 720
++ R K+ A++ S P+
Sbjct: 179 AYVARLNSRPKLKAFLASPEHMNRPI 204
>ref|XP_002699444.1| PREDICTED: glutathione S-transferase, pi 1-like [Bos taurus].
Length = 231
Score = 97.4 bits (241), Expect = 2e-20
Identities = 61/207 (29%), Positives = 100/207 (48%), Gaps = 4/207 (1%)
Frame = +1
Query: 115 YWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLSDKFKLGLDFPNLPYLIDG 294
Y+ RG A+R+LL D S++E+ T + WL K + LP DG
Sbjct: 29 YFPTRGRCEALRMLLADQDQSWKEEVVT--------KESWLQGPLKASCLYGQLPKFQDG 80
Query: 295 AHKLTQSNAILRYIARKHNMCGETEEEKIRVDILENQAMDVRLQMARICYSPDFEKLKPG 474
L QSNAILR++ R + G E E VD++ + D+R + + E+ K
Sbjct: 81 DLTLYQSNAILRHLGRSFGLYGTDEREAALVDMVNDGLEDLRRHCGHLIHHKR-EEDKAQ 139
Query: 475 YLKEIPEILKCFSEFL----GKRPWFAGDKLTYVDFLAYDVLDRNRIFEPKCLDEFPNLK 642
Y++E+P L+ F L G + + GD++++ D+ D+L +++ P CLD FP L
Sbjct: 140 YVQELPVHLQPFETLLSQNQGGQAFIVGDQISFADYNLLDLLLNHQVLVPGCLDPFPLLS 199
Query: 643 DFITRFEGLKKISAYMKSSRFHPNPMF 723
++ R K+ A++ S P+F
Sbjct: 200 AYVARLSARPKLKAFLASPEHVNRPIF 226
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 38,227,269
Number of extensions: 1078892
Number of successful extensions: 4204
Number of sequences better than 1.0e-05: 16
Number of HSP's gapped: 4172
Number of HSP's successfully gapped: 20
Length of query: 331
Length of database: 17,681,374
Length adjustment: 103
Effective length of query: 228
Effective length of database: 14,273,310
Effective search space: 3254314680
Effective search space used: 3254314680
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002214
(994 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_537038.2| PREDICTED: similar to Glutathione S-transferase... 388 e-108
Alignment gi|XP_537037.1| PREDICTED: similar to Glutathione S-transferase... 338 6e-93
Alignment gi|XP_865995.1| PREDICTED: similar to glutathione S-transferase... 313 2e-85
Alignment gi|XP_865966.1| PREDICTED: similar to glutathione-S-transferase... 308 4e-84
Alignment gi|XP_852576.1| PREDICTED: similar to Glutathione S-transferase... 211 9e-55
Alignment gi|XP_537961.2| PREDICTED: similar to Glutathione S-transferase... 100 3e-21
Alignment gi|XP_533213.2| PREDICTED: similar to Glutathione S-transferase... 100 3e-21
Alignment gi|XP_533214.1| PREDICTED: similar to glutathione S-transferase... 99 6e-21
Alignment gi|XP_532423.2| PREDICTED: similar to Glutathione S-transferase... 98 1e-20
Alignment gi|XP_854117.1| PREDICTED: similar to Glutathione S-transferase... 97 2e-20
>ref|XP_537038.2| PREDICTED: similar to Glutathione S-transferase Mu 1 (GSTM1-1) (GST
class-mu 1) (GSTM1a-1a) (GSTM1b-1b) (HB subunit 4)
(GTH4) isoform 1 [Canis familiaris].
Length = 218
Score = 388 bits (997), Expect = e-108
Identities = 180/218 (82%), Positives = 199/218 (91%)
Frame = +1
Query: 97 MTMIFGYWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLSDKFKLGLDFPNL 276
M MIFGYWDIRGLAHA+RLLLEYTDS YEEKKYTMGDAPDYDRSQWL++KFKLGLDFPNL
Sbjct: 1 MVMIFGYWDIRGLAHAVRLLLEYTDSHYEEKKYTMGDAPDYDRSQWLNEKFKLGLDFPNL 60
Query: 277 PYLIDGAHKLTQSNAILRYIARKHNMCGETEEEKIRVDILENQAMDVRLQMARICYSPDF 456
PYLIDGAHK+TQSNAILRYIARKHN+CGETEEEKIRVDILEN+ MD R+ ARICYSPDF
Sbjct: 61 PYLIDGAHKITQSNAILRYIARKHNLCGETEEEKIRVDILENEVMDTRIYFARICYSPDF 120
Query: 457 EKLKPGYLKEIPEILKCFSEFLGKRPWFAGDKLTYVDFLAYDVLDRNRIFEPKCLDEFPN 636
EKLKP Y+K IP+ +K +S+FLGKRPWFAG+KLTYVDFL YD+LD +RIFEP LD FPN
Sbjct: 121 EKLKPEYVKAIPDKMKLYSQFLGKRPWFAGEKLTYVDFLVYDILDLHRIFEPTSLDAFPN 180
Query: 637 LKDFITRFEGLKKISAYMKSSRFHPNPMFLKIAVWGNK 750
LK+F+ RFEGLK ISAYMKSSRF P P+FLKIA+WGNK
Sbjct: 181 LKEFMARFEGLKNISAYMKSSRFVPGPLFLKIAMWGNK 218
>ref|XP_537037.1| PREDICTED: similar to Glutathione S-transferase Mu 3 (GSTM3-3) (GST
class-mu 3) (hGSTM3-3) isoform 1 [Canis familiaris].
Length = 226
Score = 338 bits (866), Expect = 6e-93
Identities = 156/216 (72%), Positives = 187/216 (86%)
Frame = +1
Query: 103 MIFGYWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLSDKFKLGLDFPNLPY 282
M+ GYWDIRGLAHAIR+LLE+TD+ YEE++YT G+APDYD+SQWL KFKL LDFPNLPY
Sbjct: 8 MVLGYWDIRGLAHAIRMLLEFTDTCYEERRYTCGEAPDYDKSQWLDVKFKLDLDFPNLPY 67
Query: 283 LIDGAHKLTQSNAILRYIARKHNMCGETEEEKIRVDILENQAMDVRLQMARICYSPDFEK 462
L+DG +K+TQSNAILRYIARKHNMCGETEEE+IRVDI+ENQ MD R+Q+ ++CYSPD EK
Sbjct: 68 LMDGKNKITQSNAILRYIARKHNMCGETEEERIRVDIMENQIMDFRIQLVQLCYSPDLEK 127
Query: 463 LKPGYLKEIPEILKCFSEFLGKRPWFAGDKLTYVDFLAYDVLDRNRIFEPKCLDEFPNLK 642
LKP YL+++P LK FS FLGK WFAG+KLT+VDFL YDVLD+NR+FEPKCLDEFPNLK
Sbjct: 128 LKPRYLEQLPGQLKQFSLFLGKFSWFAGEKLTFVDFLTYDVLDQNRMFEPKCLDEFPNLK 187
Query: 643 DFITRFEGLKKISAYMKSSRFHPNPMFLKIAVWGNK 750
F+ RFE L+KI+ YM+S RF P+ K+A+WGNK
Sbjct: 188 AFMCRFEALEKIANYMQSDRFLKMPINNKMALWGNK 223
>ref|XP_865995.1| PREDICTED: similar to glutathione S-transferase M1 isoform 2
isoform 2 [Canis familiaris].
Length = 181
Score = 313 bits (801), Expect = 2e-85
Identities = 153/218 (70%), Positives = 168/218 (77%)
Frame = +1
Query: 97 MTMIFGYWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLSDKFKLGLDFPNL 276
M MIFGYWDIRGLAHA+RLLLEYTDS YEEKKYTMGDAPDYDRSQWL++KFKLGLDFPNL
Sbjct: 1 MVMIFGYWDIRGLAHAVRLLLEYTDSHYEEKKYTMGDAPDYDRSQWLNEKFKLGLDFPNL 60
Query: 277 PYLIDGAHKLTQSNAILRYIARKHNMCGETEEEKIRVDILENQAMDVRLQMARICYSPDF 456
PYLIDGAHK+TQSNAILRYIARKHN+CGETEEEKIRVDILEN+ MD R+ ARICYSPDF
Sbjct: 61 PYLIDGAHKITQSNAILRYIARKHNLCGETEEEKIRVDILENEVMDTRIYFARICYSPDF 120
Query: 457 EKLKPGYLKEIPEILKCFSEFLGKRPWFAGDKLTYVDFLAYDVLDRNRIFEPKCLDEFPN 636
EKLKP Y+K IP+ +K +S+FLGKRPWFAG+K
Sbjct: 121 EKLKPEYVKAIPDKMKLYSQFLGKRPWFAGEK---------------------------- 152
Query: 637 LKDFITRFEGLKKISAYMKSSRFHPNPMFLKIAVWGNK 750
GLK ISAYMKSSRF P P+FLKIA+WGNK
Sbjct: 153 ---------GLKNISAYMKSSRFVPGPLFLKIAMWGNK 181
>ref|XP_865966.1| PREDICTED: similar to glutathione-S-transferase, mu 5 isoform 2
[Canis familiaris].
Length = 194
Score = 308 bits (790), Expect = 4e-84
Identities = 141/187 (75%), Positives = 166/187 (88%)
Frame = +1
Query: 103 MIFGYWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLSDKFKLGLDFPNLPY 282
M+ GYWDIRGLAHAIR+LLE+TD+ YEE++YT G+APDYD+SQWL KFKL LDFPNLPY
Sbjct: 8 MVLGYWDIRGLAHAIRMLLEFTDTCYEERRYTCGEAPDYDKSQWLDVKFKLDLDFPNLPY 67
Query: 283 LIDGAHKLTQSNAILRYIARKHNMCGETEEEKIRVDILENQAMDVRLQMARICYSPDFEK 462
L+DG +K+TQSNAILRYIARKHNMCGETEEE+IRVDI+ENQ MD R+Q+ ++CYSPD EK
Sbjct: 68 LMDGKNKITQSNAILRYIARKHNMCGETEEERIRVDIMENQIMDFRIQLVQLCYSPDLEK 127
Query: 463 LKPGYLKEIPEILKCFSEFLGKRPWFAGDKLTYVDFLAYDVLDRNRIFEPKCLDEFPNLK 642
LKP YL+++P LK FS FLGK WFAG+KLT+VDFL YDVLD+NR+FEPKCLDEFPNLK
Sbjct: 128 LKPRYLEQLPGQLKQFSLFLGKFSWFAGEKLTFVDFLTYDVLDQNRMFEPKCLDEFPNLK 187
Query: 643 DFITRFE 663
F+ RFE
Sbjct: 188 AFMCRFE 194
>ref|XP_852576.1| PREDICTED: similar to Glutathione S-transferase Mu 1 (GSTM1-1) (GST
class-mu 1) (GSTM1a-1a) (GSTM1b-1b) (HB subunit 4)
(GTH4) [Canis familiaris].
Length = 218
Score = 211 bits (537), Expect = 9e-55
Identities = 104/159 (65%), Positives = 117/159 (73%)
Frame = +1
Query: 169 DSSYEEKKYTMGDAPDYDRSQWLSDKFKLGLDFPNLPYLIDGAHKLTQSNAILRYIARKH 348
DS YEEKKYTMGDAP YDRSQWL++KFKLGLDFPNLPYLIDGAHK+TQSNAILRYIARKH
Sbjct: 71 DSHYEEKKYTMGDAPGYDRSQWLNEKFKLGLDFPNLPYLIDGAHKITQSNAILRYIARKH 130
Query: 349 NMCGETEEEKIRVDILENQAMDVRLQMARICYSPDFEKLKPGYLKEIPEILKCFSEFLGK 528
N+ G+ E ICYSPDFEKLKP Y+K P+ +K +S+ LGK
Sbjct: 131 NLWGDGRGED------------------SICYSPDFEKLKPEYVKANPDKMKLYSQLLGK 172
Query: 529 RPWFAGDKLTYVDFLAYDVLDRNRIFEPKCLDEFPNLKD 645
RPWFAG+KLTYVDF D+LD RI EP LD PNLK+
Sbjct: 173 RPWFAGEKLTYVDFPVSDILDLPRIVEPTSLDALPNLKE 211
>ref|XP_537961.2| PREDICTED: similar to Glutathione S-transferase P (GST 7-7) (Chain
7) (GST class-pi) [Canis familiaris].
Length = 231
Score = 100 bits (248), Expect = 3e-21
Identities = 59/206 (28%), Positives = 104/206 (50%), Gaps = 4/206 (1%)
Frame = +1
Query: 115 YWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLSDKFKLGLDFPNLPYLIDG 294
Y+ +RG A+R+LL S++E+ TM W+ K + LP DG
Sbjct: 29 YFPVRGRCEAMRMLLADQGQSWKEEVVTM--------ETWMKGSLKASCLYGQLPKFQDG 80
Query: 295 AHKLTQSNAILRYIARKHNMCGETEEEKIRVDILENQAMDVRLQMARICYSPDFEKLKPG 474
L QSNAILR++ R + G+ ++E +D++ + D+R + A + Y+ ++E K
Sbjct: 81 DLTLYQSNAILRHLGRSLGLYGKDQQEAALLDVVNDGVEDLRCKYALLIYT-NYEAGKEE 139
Query: 475 YLKEIPEILKCFSEFL----GKRPWFAGDKLTYVDFLAYDVLDRNRIFEPKCLDEFPNLK 642
Y+K +P LK F L G + + G+++++ D+ D+L +++ P CLD FP L
Sbjct: 140 YVKALPGYLKPFETLLSQNEGGQAFIVGNQISFADYNLLDLLLIHQVLAPSCLDSFPLLS 199
Query: 643 DFITRFEGLKKISAYMKSSRFHPNPM 720
++ R K+ A++ S P+
Sbjct: 200 AYVARLSARPKLKAFLSSPEHVNRPI 225
>ref|XP_533213.2| PREDICTED: similar to Glutathione S-transferase P (GST 7-7) (Chain
7) (GST class-pi) [Canis familiaris].
Length = 317
Score = 100 bits (248), Expect = 3e-21
Identities = 59/206 (28%), Positives = 104/206 (50%), Gaps = 4/206 (1%)
Frame = +1
Query: 115 YWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLSDKFKLGLDFPNLPYLIDG 294
Y+ +RG A+R+LL S++E+ TM W+ K + LP DG
Sbjct: 115 YFPVRGRCEAMRMLLADQGQSWKEEVVTM--------ETWMKGSLKASCLYGQLPKFQDG 166
Query: 295 AHKLTQSNAILRYIARKHNMCGETEEEKIRVDILENQAMDVRLQMARICYSPDFEKLKPG 474
L QSNAILR++ R + G+ ++E +D++ + D+R + A + Y+ ++E K
Sbjct: 167 DLTLYQSNAILRHLGRSLGLYGKDQQEAALLDVVNDGVEDLRCKYALLIYT-NYEAGKEE 225
Query: 475 YLKEIPEILKCFSEFL----GKRPWFAGDKLTYVDFLAYDVLDRNRIFEPKCLDEFPNLK 642
Y+K +P LK F L G + + G+++++ D+ D+L +++ P CLD FP L
Sbjct: 226 YVKALPGYLKPFETLLSQNEGGQAFIVGNQISFADYNLLDLLLIHQVLAPSCLDSFPLLS 285
Query: 643 DFITRFEGLKKISAYMKSSRFHPNPM 720
++ R K+ A++ S P+
Sbjct: 286 AYVARLSARPKLKAFLSSPEHVNRPI 311
>ref|XP_533214.1| PREDICTED: similar to glutathione S-transferase, pi 1 [Canis
familiaris].
Length = 210
Score = 99.0 bits (245), Expect = 6e-21
Identities = 60/206 (29%), Positives = 102/206 (49%), Gaps = 4/206 (1%)
Frame = +1
Query: 115 YWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLSDKFKLGLDFPNLPYLIDG 294
Y+ +RG A+R+LL S++E+ T + W+ K + LP DG
Sbjct: 8 YFPVRGRCEAMRMLLADQGQSWKEEVVT--------KDSWMQSPLKASCLYGQLPKFQDG 59
Query: 295 AHKLTQSNAILRYIARKHNMCGETEEEKIRVDILENQAMDVRLQMARICYSPDFEKLKPG 474
L QSNAILR++ R + G+ + E VD++ + DVR +++ + +E K
Sbjct: 60 DLTLYQSNAILRHLGRTFGLYGKDQREAALVDMVNDGVEDVRRHCSQLIHH-SYEGGKAR 118
Query: 475 YLKEIPEILKCFSEFL----GKRPWFAGDKLTYVDFLAYDVLDRNRIFEPKCLDEFPNLK 642
Y++E+P LK F L G + + GD++++ D+ D+L +++ P CLD P L
Sbjct: 119 YVQELPGYLKPFETLLIQNQGGQAFIVGDQISFADYNLLDLLLNHQVLAPGCLDSHPLLL 178
Query: 643 DFITRFEGLKKISAYMKSSRFHPNPM 720
++TR K+ AY+ S P+
Sbjct: 179 AYVTRLSARPKLKAYLASPEHVNRPV 204
>ref|XP_532423.2| PREDICTED: similar to Glutathione S-transferase P (GST 7-7) (Chain
7) (GST class-pi) [Canis familiaris].
Length = 210
Score = 98.2 bits (243), Expect = 1e-20
Identities = 58/206 (28%), Positives = 104/206 (50%), Gaps = 4/206 (1%)
Frame = +1
Query: 115 YWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLSDKFKLGLDFPNLPYLIDG 294
Y+ +RG A+R+LL S++E+ TM W+ K + LP DG
Sbjct: 8 YFPVRGRCEAMRMLLADQSQSWKEEVVTM--------ETWMKGSLKASCLYGQLPKFQDG 59
Query: 295 AHKLTQSNAILRYIARKHNMCGETEEEKIRVDILENQAMDVRLQMARICYSPDFEKLKPG 474
L QSNAILR++ R + G+ ++E +D++ + D+R + A + Y+ ++E K
Sbjct: 60 DLTLYQSNAILRHLGRSLGLYGKDQQEAALLDVVNDGVEDLRCKYALLIYT-NYEAGKEE 118
Query: 475 YLKEIPEILKCFSEFL----GKRPWFAGDKLTYVDFLAYDVLDRNRIFEPKCLDEFPNLK 642
Y+K +P LK F + L G + + G+++++ D+ D+L +++ P CLD FP L
Sbjct: 119 YVKALPGYLKPFEKLLSQNEGGQAFIVGNQISFADYNLLDLLLIHQVLAPSCLDSFPLLS 178
Query: 643 DFITRFEGLKKISAYMKSSRFHPNPM 720
++ K+ A++ S P+
Sbjct: 179 AYVACLSARPKLKAFLSSPEHVNRPI 204
>ref|XP_854117.1| PREDICTED: similar to Glutathione S-transferase P (GST 7-7) (Chain
7) (GST class-pi) [Canis familiaris].
Length = 318
Score = 97.4 bits (241), Expect = 2e-20
Identities = 58/206 (28%), Positives = 104/206 (50%), Gaps = 4/206 (1%)
Frame = +1
Query: 115 YWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLSDKFKLGLDFPNLPYLIDG 294
Y+ +RG A+ +LL S++E+ TM W++ K + LP DG
Sbjct: 116 YFPVRGRCEAMHMLLADQGQSWKEEVVTM--------ETWMNGSLKASCLYGQLPKFQDG 167
Query: 295 AHKLTQSNAILRYIARKHNMCGETEEEKIRVDILENQAMDVRLQMARICYSPDFEKLKPG 474
L QSNAILR++ R + G+ ++E +D++ + D+R + A + Y+ ++E K
Sbjct: 168 DLTLYQSNAILRHLGRSLGLYGKDQQEAALLDVVNDGVEDLRCKYALLIYT-NYEAGKEE 226
Query: 475 YLKEIPEILKCFSEFL----GKRPWFAGDKLTYVDFLAYDVLDRNRIFEPKCLDEFPNLK 642
Y+K +P LK F L G + + G+++++ D+ D+L +++ P CLD FP L
Sbjct: 227 YVKALPGYLKPFEMLLSQNEGGQAFIVGNQISFADYNLLDLLLIHQVLAPSCLDSFPLLS 286
Query: 643 DFITRFEGLKKISAYMKSSRFHPNPM 720
++ R K+ A++ S P+
Sbjct: 287 AYVARLSARPKLKAFLLSPEHVNRPI 312
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 39,910,228
Number of extensions: 1108625
Number of successful extensions: 4782
Number of sequences better than 1.0e-05: 16
Number of HSP's gapped: 4682
Number of HSP's successfully gapped: 17
Length of query: 331
Length of database: 18,874,504
Length adjustment: 103
Effective length of query: 228
Effective length of database: 15,440,896
Effective search space: 3520524288
Effective search space used: 3520524288
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002214
(994 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_000841.1| glutathione S-transferase Mu 4 isoform 1 [Homo ... 390 e-109
Alignment gi|NP_000552.2| glutathione S-transferase Mu 1 isoform 1 [Homo ... 388 e-108
Alignment gi|NP_000839.1| glutathione S-transferase Mu 2 isoform 1 [Homo ... 379 e-105
Alignment gi|NP_000842.2| glutathione S-transferase Mu 5 [Homo sapiens]. 372 e-103
Alignment gi|NP_671489.1| glutathione S-transferase Mu 4 isoform 2 [Homo ... 344 6e-95
Alignment gi|NP_000840.2| glutathione S-transferase Mu 3 [Homo sapiens]. 341 5e-94
Alignment gi|NP_001135840.1| glutathione S-transferase Mu 2 isoform 2 [Ho... 332 3e-91
Alignment gi|NP_666533.1| glutathione S-transferase Mu 1 isoform 2 [Homo ... 305 3e-83
Alignment gi|NP_000843.1| glutathione S-transferase P [Homo sapiens]. 94 2e-19
Alignment gi|NP_055300.1| hematopoietic prostaglandin D synthase [Homo sa... 72 8e-13
>ref|NP_000841.1| glutathione S-transferase Mu 4 isoform 1 [Homo sapiens].
Length = 218
Score = 390 bits (1003), Expect = e-109
Identities = 181/218 (83%), Positives = 203/218 (93%)
Frame = +1
Query: 97 MTMIFGYWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLSDKFKLGLDFPNL 276
M+M GYWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWL++KFKLGLDFPNL
Sbjct: 1 MSMTLGYWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLNEKFKLGLDFPNL 60
Query: 277 PYLIDGAHKLTQSNAILRYIARKHNMCGETEEEKIRVDILENQAMDVRLQMARICYSPDF 456
PYLIDGAHK+TQSNAIL YIARKHN+CGETEEEKIRVDILENQAMDV Q+AR+CYSPDF
Sbjct: 61 PYLIDGAHKITQSNAILCYIARKHNLCGETEEEKIRVDILENQAMDVSNQLARVCYSPDF 120
Query: 457 EKLKPGYLKEIPEILKCFSEFLGKRPWFAGDKLTYVDFLAYDVLDRNRIFEPKCLDEFPN 636
EKLKP YL+E+P +++ FS+FLGKRPWF GDK+T+VDFLAYDVLD +RIFEP CLD FPN
Sbjct: 121 EKLKPEYLEELPTMMQHFSQFLGKRPWFVGDKITFVDFLAYDVLDLHRIFEPNCLDAFPN 180
Query: 637 LKDFITRFEGLKKISAYMKSSRFHPNPMFLKIAVWGNK 750
LKDFI+RFEGL+KISAYMKSSRF P P++ ++AVWGNK
Sbjct: 181 LKDFISRFEGLEKISAYMKSSRFLPKPLYTRVAVWGNK 218
>ref|NP_000552.2| glutathione S-transferase Mu 1 isoform 1 [Homo sapiens].
Length = 218
Score = 388 bits (997), Expect = e-108
Identities = 182/218 (83%), Positives = 201/218 (92%)
Frame = +1
Query: 97 MTMIFGYWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLSDKFKLGLDFPNL 276
M MI GYWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWL++KFKLGLDFPNL
Sbjct: 1 MPMILGYWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLNEKFKLGLDFPNL 60
Query: 277 PYLIDGAHKLTQSNAILRYIARKHNMCGETEEEKIRVDILENQAMDVRLQMARICYSPDF 456
PYLIDGAHK+TQSNAIL YIARKHN+CGETEEEKIRVDILENQ MD +Q+ ICY+P+F
Sbjct: 61 PYLIDGAHKITQSNAILCYIARKHNLCGETEEEKIRVDILENQTMDNHMQLGMICYNPEF 120
Query: 457 EKLKPGYLKEIPEILKCFSEFLGKRPWFAGDKLTYVDFLAYDVLDRNRIFEPKCLDEFPN 636
EKLKP YL+E+PE LK +SEFLGKRPWFAG+K+T+VDFL YDVLD +RIFEPKCLD FPN
Sbjct: 121 EKLKPKYLEELPEKLKLYSEFLGKRPWFAGNKITFVDFLVYDVLDLHRIFEPKCLDAFPN 180
Query: 637 LKDFITRFEGLKKISAYMKSSRFHPNPMFLKIAVWGNK 750
LKDFI+RFEGL+KISAYMKSSRF P P+F K+AVWGNK
Sbjct: 181 LKDFISRFEGLEKISAYMKSSRFLPRPVFSKMAVWGNK 218
>ref|NP_000839.1| glutathione S-transferase Mu 2 isoform 1 [Homo sapiens].
Length = 218
Score = 379 bits (974), Expect = e-105
Identities = 172/218 (78%), Positives = 201/218 (92%)
Frame = +1
Query: 97 MTMIFGYWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLSDKFKLGLDFPNL 276
M M GYW+IRGLAH+IRLLLEYTDSSYEEKKYTMGDAPDYDRSQWL++KFKLGLDFPNL
Sbjct: 1 MPMTLGYWNIRGLAHSIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLNEKFKLGLDFPNL 60
Query: 277 PYLIDGAHKLTQSNAILRYIARKHNMCGETEEEKIRVDILENQAMDVRLQMARICYSPDF 456
PYLIDG HK+TQSNAILRYIARKHN+CGE+E+E+IR DILENQ MD R+Q+A++CY PDF
Sbjct: 61 PYLIDGTHKITQSNAILRYIARKHNLCGESEKEQIREDILENQFMDSRMQLAKLCYDPDF 120
Query: 457 EKLKPGYLKEIPEILKCFSEFLGKRPWFAGDKLTYVDFLAYDVLDRNRIFEPKCLDEFPN 636
EKLKP YL+ +PE+LK +S+FLGK+PWF GDK+T+VDF+AYDVL+RN++FEP CLD FPN
Sbjct: 121 EKLKPEYLQALPEMLKLYSQFLGKQPWFLGDKITFVDFIAYDVLERNQVFEPSCLDAFPN 180
Query: 637 LKDFITRFEGLKKISAYMKSSRFHPNPMFLKIAVWGNK 750
LKDFI+RFEGL+KISAYMKSSRF P P+F K+AVWGNK
Sbjct: 181 LKDFISRFEGLEKISAYMKSSRFLPRPVFTKMAVWGNK 218
>ref|NP_000842.2| glutathione S-transferase Mu 5 [Homo sapiens].
Length = 218
Score = 372 bits (955), Expect = e-103
Identities = 176/218 (80%), Positives = 194/218 (88%)
Frame = +1
Query: 97 MTMIFGYWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLSDKFKLGLDFPNL 276
M M GYWDIRGLAHAIRLLLEYTDSSY EKKYT+GDAPDYDRSQWL++KFKLGLDFPNL
Sbjct: 1 MPMTLGYWDIRGLAHAIRLLLEYTDSSYVEKKYTLGDAPDYDRSQWLNEKFKLGLDFPNL 60
Query: 277 PYLIDGAHKLTQSNAILRYIARKHNMCGETEEEKIRVDILENQAMDVRLQMARICYSPDF 456
PYLIDGAHK+TQSNAILRYIARKHN+CGETEEEKIRVDILENQ MD +++ R+CY PDF
Sbjct: 61 PYLIDGAHKITQSNAILRYIARKHNLCGETEEEKIRVDILENQVMDNHMELVRLCYDPDF 120
Query: 457 EKLKPGYLKEIPEILKCFSEFLGKRPWFAGDKLTYVDFLAYDVLDRNRIFEPKCLDEFPN 636
EKLKP YL+E+PE LK +SEFLGKRPWFAGDK+T+VDFLAYDVLD RIFEPKCLD F N
Sbjct: 121 EKLKPKYLEELPEKLKLYSEFLGKRPWFAGDKITFVDFLAYDVLDMKRIFEPKCLDAFLN 180
Query: 637 LKDFITRFEGLKKISAYMKSSRFHPNPMFLKIAVWGNK 750
LKDFI+RFEGLKKISAYMKSS+F +F K A W +K
Sbjct: 181 LKDFISRFEGLKKISAYMKSSQFLRGLLFGKSATWNSK 218
>ref|NP_671489.1| glutathione S-transferase Mu 4 isoform 2 [Homo sapiens].
Length = 195
Score = 344 bits (883), Expect = 6e-95
Identities = 160/189 (84%), Positives = 177/189 (93%)
Frame = +1
Query: 97 MTMIFGYWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLSDKFKLGLDFPNL 276
M+M GYWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWL++KFKLGLDFPNL
Sbjct: 1 MSMTLGYWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLNEKFKLGLDFPNL 60
Query: 277 PYLIDGAHKLTQSNAILRYIARKHNMCGETEEEKIRVDILENQAMDVRLQMARICYSPDF 456
PYLIDGAHK+TQSNAIL YIARKHN+CGETEEEKIRVDILENQAMDV Q+AR+CYSPDF
Sbjct: 61 PYLIDGAHKITQSNAILCYIARKHNLCGETEEEKIRVDILENQAMDVSNQLARVCYSPDF 120
Query: 457 EKLKPGYLKEIPEILKCFSEFLGKRPWFAGDKLTYVDFLAYDVLDRNRIFEPKCLDEFPN 636
EKLKP YL+E+P +++ FS+FLGKRPWF GDK+T+VDFLAYDVLD +RIFEP CLD FPN
Sbjct: 121 EKLKPEYLEELPTMMQHFSQFLGKRPWFVGDKITFVDFLAYDVLDLHRIFEPNCLDAFPN 180
Query: 637 LKDFITRFE 663
LKDFI+RFE
Sbjct: 181 LKDFISRFE 189
>ref|NP_000840.2| glutathione S-transferase Mu 3 [Homo sapiens].
Length = 225
Score = 341 bits (875), Expect = 5e-94
Identities = 160/217 (73%), Positives = 187/217 (86%)
Frame = +1
Query: 100 TMIFGYWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLSDKFKLGLDFPNLP 279
+M+ GYWDIRGLAHAIRLLLE+TD+SYEEK+YT G+APDYDRSQWL KFKL LDFPNLP
Sbjct: 6 SMVLGYWDIRGLAHAIRLLLEFTDTSYEEKRYTCGEAPDYDRSQWLDVKFKLDLDFPNLP 65
Query: 280 YLIDGAHKLTQSNAILRYIARKHNMCGETEEEKIRVDILENQAMDVRLQMARICYSPDFE 459
YL+DG +K+TQSNAILRYIARKHNMCGETEEEKIRVDI+ENQ MD R Q+ R+CYS D E
Sbjct: 66 YLLDGKNKITQSNAILRYIARKHNMCGETEEEKIRVDIIENQVMDFRTQLIRLCYSSDHE 125
Query: 460 KLKPGYLKEIPEILKCFSEFLGKRPWFAGDKLTYVDFLAYDVLDRNRIFEPKCLDEFPNL 639
KLKP YL+E+P LK FS FLGK WFAG+KLT+VDFL YD+LD+NRIF+PKCLDEFPNL
Sbjct: 126 KLKPQYLEELPGQLKQFSMFLGKFSWFAGEKLTFVDFLTYDILDQNRIFDPKCLDEFPNL 185
Query: 640 KDFITRFEGLKKISAYMKSSRFHPNPMFLKIAVWGNK 750
K F+ RFE L+KI+AY++S +F P+ K+A WGNK
Sbjct: 186 KAFMCRFEALEKIAAYLQSDQFCKMPINNKMAQWGNK 222
>ref|NP_001135840.1| glutathione S-transferase Mu 2 isoform 2 [Homo sapiens].
Length = 191
Score = 332 bits (851), Expect = 3e-91
Identities = 149/189 (78%), Positives = 175/189 (92%)
Frame = +1
Query: 97 MTMIFGYWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLSDKFKLGLDFPNL 276
M M GYW+IRGLAH+IRLLLEYTDSSYEEKKYTMGDAPDYDRSQWL++KFKLGLDFPNL
Sbjct: 1 MPMTLGYWNIRGLAHSIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLNEKFKLGLDFPNL 60
Query: 277 PYLIDGAHKLTQSNAILRYIARKHNMCGETEEEKIRVDILENQAMDVRLQMARICYSPDF 456
PYLIDG HK+TQSNAILRYIARKHN+CGE+E+E+IR DILENQ MD R+Q+A++CY PDF
Sbjct: 61 PYLIDGTHKITQSNAILRYIARKHNLCGESEKEQIREDILENQFMDSRMQLAKLCYDPDF 120
Query: 457 EKLKPGYLKEIPEILKCFSEFLGKRPWFAGDKLTYVDFLAYDVLDRNRIFEPKCLDEFPN 636
EKLKP YL+ +PE+LK +S+FLGK+PWF GDK+T+VDF+AYDVL+RN++FEP CLD FPN
Sbjct: 121 EKLKPEYLQALPEMLKLYSQFLGKQPWFLGDKITFVDFIAYDVLERNQVFEPSCLDAFPN 180
Query: 637 LKDFITRFE 663
LKDFI+RFE
Sbjct: 181 LKDFISRFE 189
>ref|NP_666533.1| glutathione S-transferase Mu 1 isoform 2 [Homo sapiens].
Length = 181
Score = 305 bits (782), Expect = 3e-83
Identities = 152/218 (69%), Positives = 167/218 (76%)
Frame = +1
Query: 97 MTMIFGYWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLSDKFKLGLDFPNL 276
M MI GYWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWL++KFKLGLDFPNL
Sbjct: 1 MPMILGYWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLNEKFKLGLDFPNL 60
Query: 277 PYLIDGAHKLTQSNAILRYIARKHNMCGETEEEKIRVDILENQAMDVRLQMARICYSPDF 456
PYLIDGAHK+TQSNAIL YIARKHN+CGETEEEKIRVDILENQ MD +Q+ ICY+P+F
Sbjct: 61 PYLIDGAHKITQSNAILCYIARKHNLCGETEEEKIRVDILENQTMDNHMQLGMICYNPEF 120
Query: 457 EKLKPGYLKEIPEILKCFSEFLGKRPWFAGDKLTYVDFLAYDVLDRNRIFEPKCLDEFPN 636
EKLKP YL+E+PE LK +SEFLGKRPWFAG+K
Sbjct: 121 EKLKPKYLEELPEKLKLYSEFLGKRPWFAGNK---------------------------- 152
Query: 637 LKDFITRFEGLKKISAYMKSSRFHPNPMFLKIAVWGNK 750
GL+KISAYMKSSRF P P+F K+AVWGNK
Sbjct: 153 ---------GLEKISAYMKSSRFLPRPVFSKMAVWGNK 181
>ref|NP_000843.1| glutathione S-transferase P [Homo sapiens].
Length = 210
Score = 94.0 bits (232), Expect = 2e-19
Identities = 60/215 (27%), Positives = 105/215 (48%), Gaps = 4/215 (1%)
Frame = +1
Query: 115 YWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLSDKFKLGLDFPNLPYLIDG 294
Y+ +RG A+R+LL S++E+ T+ W K + LP DG
Sbjct: 8 YFPVRGRCAALRMLLADQGQSWKEEVVTV--------ETWQEGSLKASCLYGQLPKFQDG 59
Query: 295 AHKLTQSNAILRYIARKHNMCGETEEEKIRVDILENQAMDVRLQMARICYSPDFEKLKPG 474
L QSN ILR++ R + G+ ++E VD++ + D+R + + Y+ ++E K
Sbjct: 60 DLTLYQSNTILRHLGRTLGLYGKDQQEAALVDMVNDGVEDLRCKYISLIYT-NYEAGKDD 118
Query: 475 YLKEIPEILKCFSEFL----GKRPWFAGDKLTYVDFLAYDVLDRNRIFEPKCLDEFPNLK 642
Y+K +P LK F L G + + GD++++ D+ D+L + + P CLD FP L
Sbjct: 119 YVKALPGQLKPFETLLSQNQGGKTFIVGDQISFADYNLLDLLLIHEVLAPGCLDAFPLLS 178
Query: 643 DFITRFEGLKKISAYMKSSRFHPNPMFLKIAVWGN 747
++ R K+ A++ S P ++ + + GN
Sbjct: 179 AYVGRLSARPKLKAFLAS------PEYVNLPINGN 207
>ref|NP_055300.1| hematopoietic prostaglandin D synthase [Homo sapiens].
Length = 199
Score = 72.0 bits (175), Expect = 8e-13
Identities = 50/198 (25%), Positives = 87/198 (43%), Gaps = 5/198 (2%)
Frame = +1
Query: 115 YWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLSDKFKLGLDFPNLPYLIDG 294
Y+++RG A IR + Y D YE+ + D P+ K L F +P L
Sbjct: 8 YFNMRGRAEIIRYIFAYLDIQYEDHRIEQADWPE----------IKSTLPFGKIPILEVD 57
Query: 295 AHKLTQSNAILRYIARKHNMCGETEEEKIRVDILENQAMDVRLQMARICYSPDFEKLKPG 474
L QS AI RY+ + ++ G TE E+ VD + + D M+ ++ + +K
Sbjct: 58 GLTLHQSLAIARYLTKNTDLAGNTEMEQCHVDAIVDTLDDF---MSCFPWAEKKQDVKEQ 114
Query: 475 YLKEI-----PEILKCFSEFLGKRPWFAGDKLTYVDFLAYDVLDRNRIFEPKCLDEFPNL 639
E+ P +++ +LG R W G+ +T+ DF +F+P LD P L
Sbjct: 115 MFNELLTYNAPHLMQDLDTYLGGREWLIGNSVTWADFYWEICSTTLLVFKPDLLDNHPRL 174
Query: 640 KDFITRFEGLKKISAYMK 693
+ + + ++ ++K
Sbjct: 175 VTLRKKVQAIPAVANWIK 192
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 39,228,011
Number of extensions: 1100142
Number of successful extensions: 4199
Number of sequences better than 1.0e-05: 14
Number of HSP's gapped: 4132
Number of HSP's successfully gapped: 15
Length of query: 331
Length of database: 18,297,164
Length adjustment: 103
Effective length of query: 228
Effective length of database: 14,901,872
Effective search space: 3397626816
Effective search space used: 3397626816
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002214
(994 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_032209.1| glutathione S-transferase Mu 2 [Mus musculus]. 375 e-104
Alignment gi|NP_080948.2| glutathione S-transferase Mu 7 [Mus musculus]. 375 e-104
Alignment gi|NP_081040.1| glutathione S-transferase mu 4 isoform 1 [Mus m... 367 e-102
Alignment gi|NP_034489.1| glutathione S-transferase Mu 3 [Mus musculus]. 362 e-100
Alignment gi|NP_034488.1| glutathione S-transferase Mu 1 [Mus musculus]. 360 e-100
Alignment gi|NP_032210.3| glutathione S-transferase Mu 6 [Mus musculus]. 358 3e-99
Alignment gi|NP_034490.1| glutathione S-transferase Mu 5 [Mus musculus]. 334 7e-92
Alignment gi|NP_001153883.1| glutathione S-transferase mu 4 isoform 2 [Mu... 308 4e-84
Alignment gi|XP_136255.4| PREDICTED: glutathione S-transferase Mu 1-like ... 276 2e-74
Alignment gi|XP_920855.1| PREDICTED: glutathione S-transferase Mu 1-like ... 276 2e-74
>ref|NP_032209.1| glutathione S-transferase Mu 2 [Mus musculus].
Length = 218
Score = 375 bits (964), Expect = e-104
Identities = 174/218 (79%), Positives = 197/218 (90%)
Frame = +1
Query: 97 MTMIFGYWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLSDKFKLGLDFPNL 276
M M GYWDIRGLAHAIRLLLEYTD+SYE+KKYTMGDAPDYDRSQWLS+KFKLGLDFPNL
Sbjct: 1 MPMTLGYWDIRGLAHAIRLLLEYTDTSYEDKKYTMGDAPDYDRSQWLSEKFKLGLDFPNL 60
Query: 277 PYLIDGAHKLTQSNAILRYIARKHNMCGETEEEKIRVDILENQAMDVRLQMARICYSPDF 456
PYLIDG+HK+TQSNAILRY+ARKHN+CGETEEE+IRVDILENQAMD R+Q+A +CYSPDF
Sbjct: 61 PYLIDGSHKITQSNAILRYLARKHNLCGETEEERIRVDILENQAMDTRIQLAMVCYSPDF 120
Query: 457 EKLKPGYLKEIPEILKCFSEFLGKRPWFAGDKLTYVDFLAYDVLDRNRIFEPKCLDEFPN 636
EK KP YL+ +PE +K +SEFLGK+PWFAG+K+TYVDFL YDVLD++RIFEPKCLD FPN
Sbjct: 121 EKKKPEYLEGLPEKMKLYSEFLGKQPWFAGNKVTYVDFLVYDVLDQHRIFEPKCLDAFPN 180
Query: 637 LKDFITRFEGLKKISAYMKSSRFHPNPMFLKIAVWGNK 750
LKDF+ RFEGLKKIS YMKSSRF P+F K+A W K
Sbjct: 181 LKDFMGRFEGLKKISDYMKSSRFLSKPIFAKMAFWNPK 218
>ref|NP_080948.2| glutathione S-transferase Mu 7 [Mus musculus].
Length = 218
Score = 375 bits (962), Expect = e-104
Identities = 169/217 (77%), Positives = 198/217 (91%)
Frame = +1
Query: 97 MTMIFGYWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLSDKFKLGLDFPNL 276
M M GYWDIRGLAHAIRL LEYTDSSYEEK+YTMGDAPDYD+SQWL++KFKLGLDFPNL
Sbjct: 1 MPMTLGYWDIRGLAHAIRLFLEYTDSSYEEKRYTMGDAPDYDQSQWLNEKFKLGLDFPNL 60
Query: 277 PYLIDGAHKLTQSNAILRYIARKHNMCGETEEEKIRVDILENQAMDVRLQMARICYSPDF 456
PYLIDG+HK+TQSNAILRY+ RKHN+CGETEEE+IRVDILENQ MD R+ +AR+CY+ DF
Sbjct: 61 PYLIDGSHKITQSNAILRYLGRKHNLCGETEEERIRVDILENQLMDNRMVLARLCYNADF 120
Query: 457 EKLKPGYLKEIPEILKCFSEFLGKRPWFAGDKLTYVDFLAYDVLDRNRIFEPKCLDEFPN 636
EKLKPGYL+++P +++ +SEFLGKRPWFAGDK+T+VDF+AYDVL+RN++FE KCLD FPN
Sbjct: 121 EKLKPGYLEQLPGMMRLYSEFLGKRPWFAGDKITFVDFIAYDVLERNQVFEAKCLDAFPN 180
Query: 637 LKDFITRFEGLKKISAYMKSSRFHPNPMFLKIAVWGN 747
LKDFI RFEGLKKIS YMK+SRF P PMF K+A WG+
Sbjct: 181 LKDFIARFEGLKKISDYMKTSRFLPRPMFTKMATWGS 217
>ref|NP_081040.1| glutathione S-transferase mu 4 isoform 1 [Mus musculus].
Length = 218
Score = 367 bits (943), Expect = e-102
Identities = 170/218 (77%), Positives = 195/218 (89%)
Frame = +1
Query: 97 MTMIFGYWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLSDKFKLGLDFPNL 276
M M GYWDIRGLAHAIRLLLEYT SSYEEK+YTMGDAPDYDRSQWLS+KFKLGLDFPNL
Sbjct: 1 MPMTLGYWDIRGLAHAIRLLLEYTGSSYEEKRYTMGDAPDYDRSQWLSEKFKLGLDFPNL 60
Query: 277 PYLIDGAHKLTQSNAILRYIARKHNMCGETEEEKIRVDILENQAMDVRLQMARICYSPDF 456
PYLIDG+HK+TQSNAILRYIARKHN+CGETEEEKIRVDILENQAMDV Q+AR+CYSPDF
Sbjct: 61 PYLIDGSHKITQSNAILRYIARKHNLCGETEEEKIRVDILENQAMDVSNQLARVCYSPDF 120
Query: 457 EKLKPGYLKEIPEILKCFSEFLGKRPWFAGDKLTYVDFLAYDVLDRNRIFEPKCLDEFPN 636
EKLK YL+++P ++K FS+FLG+R WF G+K+T+VDFLAYD+LD + IFEP CLD FPN
Sbjct: 121 EKLKVEYLEQLPGMVKLFSQFLGQRTWFVGEKITFVDFLAYDILDLHLIFEPTCLDAFPN 180
Query: 637 LKDFITRFEGLKKISAYMKSSRFHPNPMFLKIAVWGNK 750
LKDF+ RFE LK+ISAYMK+SRF P++ K+A WGNK
Sbjct: 181 LKDFVARFEVLKRISAYMKTSRFLRTPLYTKVATWGNK 218
>ref|NP_034489.1| glutathione S-transferase Mu 3 [Mus musculus].
Length = 218
Score = 362 bits (929), Expect = e-100
Identities = 166/216 (76%), Positives = 190/216 (87%)
Frame = +1
Query: 97 MTMIFGYWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLSDKFKLGLDFPNL 276
M M GYW+ RGL H+IRLLLEYTDSSYEEK+Y MGDAP++DRSQWLS+KF LGLDFPNL
Sbjct: 1 MPMTLGYWNTRGLTHSIRLLLEYTDSSYEEKRYVMGDAPNFDRSQWLSEKFNLGLDFPNL 60
Query: 277 PYLIDGAHKLTQSNAILRYIARKHNMCGETEEEKIRVDILENQAMDVRLQMARICYSPDF 456
PYLIDG+HK+TQSNAILRY+ RKHN+CGETEEE+IRVD LENQ MD R+Q+ +C SPDF
Sbjct: 61 PYLIDGSHKVTQSNAILRYLGRKHNLCGETEEERIRVDTLENQVMDTRIQLMIVCCSPDF 120
Query: 457 EKLKPGYLKEIPEILKCFSEFLGKRPWFAGDKLTYVDFLAYDVLDRNRIFEPKCLDEFPN 636
EK KP +LK IPE +K +SEFLGKRPWFAGDK+TYVDFLAYD+LD+ R+FEPKCLD FPN
Sbjct: 121 EKQKPEFLKAIPEKMKLYSEFLGKRPWFAGDKVTYVDFLAYDILDQYRMFEPKCLDAFPN 180
Query: 637 LKDFITRFEGLKKISAYMKSSRFHPNPMFLKIAVWG 744
L+DF+ RFEGLKKISAYMKSSRF P P+F KIA WG
Sbjct: 181 LRDFLARFEGLKKISAYMKSSRFLPRPVFTKIAQWG 216
>ref|NP_034488.1| glutathione S-transferase Mu 1 [Mus musculus].
Length = 218
Score = 360 bits (925), Expect = e-100
Identities = 163/218 (74%), Positives = 194/218 (88%)
Frame = +1
Query: 97 MTMIFGYWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLSDKFKLGLDFPNL 276
M MI GYW++RGL H IR+LLEYTDSSY+EK+YTMGDAPD+DRSQWL++KFKLGLDFPNL
Sbjct: 1 MPMILGYWNVRGLTHPIRMLLEYTDSSYDEKRYTMGDAPDFDRSQWLNEKFKLGLDFPNL 60
Query: 277 PYLIDGAHKLTQSNAILRYIARKHNMCGETEEEKIRVDILENQAMDVRLQMARICYSPDF 456
PYLIDG+HK+TQSNAILRY+ARKH++ GETEEE+IR DI+ENQ MD R+Q+ +CY+PDF
Sbjct: 61 PYLIDGSHKITQSNAILRYLARKHHLDGETEEERIRADIVENQVMDTRMQLIMLCYNPDF 120
Query: 457 EKLKPGYLKEIPEILKCFSEFLGKRPWFAGDKLTYVDFLAYDVLDRNRIFEPKCLDEFPN 636
EK KP +LK IPE +K +SEFLGKRPWFAGDK+TYVDFLAYD+LD+ R+FEPKCLD FPN
Sbjct: 121 EKQKPEFLKTIPEKMKLYSEFLGKRPWFAGDKVTYVDFLAYDILDQYRMFEPKCLDAFPN 180
Query: 637 LKDFITRFEGLKKISAYMKSSRFHPNPMFLKIAVWGNK 750
L+DF+ RFEGLKKISAYMKSSR+ P+F K+A W NK
Sbjct: 181 LRDFLARFEGLKKISAYMKSSRYIATPIFSKMAHWSNK 218
>ref|NP_032210.3| glutathione S-transferase Mu 6 [Mus musculus].
Length = 218
Score = 358 bits (920), Expect = 3e-99
Identities = 162/218 (74%), Positives = 191/218 (87%)
Frame = +1
Query: 97 MTMIFGYWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLSDKFKLGLDFPNL 276
M + GYWDIRGL HAIRLLLEYT++ YEEK+Y MGDAPDYDRSQWL+DKFKL LDFPNL
Sbjct: 1 MPVTLGYWDIRGLGHAIRLLLEYTETGYEEKRYAMGDAPDYDRSQWLNDKFKLDLDFPNL 60
Query: 277 PYLIDGAHKLTQSNAILRYIARKHNMCGETEEEKIRVDILENQAMDVRLQMARICYSPDF 456
PYLIDG+HK+TQSNAILRY+ RKHN+CGETEEE+IRVDILE Q MD R+QM +CYS DF
Sbjct: 61 PYLIDGSHKVTQSNAILRYLGRKHNLCGETEEERIRVDILEKQVMDTRIQMGMLCYSADF 120
Query: 457 EKLKPGYLKEIPEILKCFSEFLGKRPWFAGDKLTYVDFLAYDVLDRNRIFEPKCLDEFPN 636
EK KP +LK +P+ LK +SEFLGK+PWFAGDK+T+ DFL YDVLD++R+FEP CLD FPN
Sbjct: 121 EKRKPEFLKGLPDQLKLYSEFLGKQPWFAGDKITFADFLVYDVLDQHRMFEPTCLDAFPN 180
Query: 637 LKDFITRFEGLKKISAYMKSSRFHPNPMFLKIAVWGNK 750
LKDF+ RFEGL+KISAYMK+SRF P+P++LK A WGN+
Sbjct: 181 LKDFMARFEGLRKISAYMKTSRFLPSPVYLKQATWGNE 218
>ref|NP_034490.1| glutathione S-transferase Mu 5 [Mus musculus].
Length = 224
Score = 334 bits (856), Expect = 7e-92
Identities = 155/217 (71%), Positives = 186/217 (85%)
Frame = +1
Query: 100 TMIFGYWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLSDKFKLGLDFPNLP 279
+M+ GYWDIRGLAHAIR+LLE+TD+SYEEK+Y G+APDYDRSQWL KFKL LDFPNLP
Sbjct: 5 SMVLGYWDIRGLAHAIRMLLEFTDTSYEEKRYICGEAPDYDRSQWLDVKFKLDLDFPNLP 64
Query: 280 YLIDGAHKLTQSNAILRYIARKHNMCGETEEEKIRVDILENQAMDVRLQMARICYSPDFE 459
YL+DG +K+TQSNAILRYIARKHNMCG+TEEEKIRVDI+ENQ MD R+Q+ R+CY+ + E
Sbjct: 65 YLMDGKNKITQSNAILRYIARKHNMCGDTEEEKIRVDIMENQIMDFRMQLVRLCYNSNHE 124
Query: 460 KLKPGYLKEIPEILKCFSEFLGKRPWFAGDKLTYVDFLAYDVLDRNRIFEPKCLDEFPNL 639
LKP YL+++P LK FS FLGK WFAG+KLT+VDFL YDVLD+NRIFEPKCLDEFPNL
Sbjct: 125 NLKPQYLEQLPAQLKQFSLFLGKFTWFAGEKLTFVDFLTYDVLDQNRIFEPKCLDEFPNL 184
Query: 640 KDFITRFEGLKKISAYMKSSRFHPNPMFLKIAVWGNK 750
K F+ RFE L+KI+A+++S RF P+ K+A WGNK
Sbjct: 185 KAFMCRFEALEKIAAFLQSDRFFKMPINNKMAKWGNK 221
>ref|NP_001153883.1| glutathione S-transferase mu 4 isoform 2 [Mus musculus].
Length = 184
Score = 308 bits (789), Expect = 4e-84
Identities = 141/184 (76%), Positives = 165/184 (89%)
Frame = +1
Query: 199 MGDAPDYDRSQWLSDKFKLGLDFPNLPYLIDGAHKLTQSNAILRYIARKHNMCGETEEEK 378
MGDAPDYDRSQWLS+KFKLGLDFPNLPYLIDG+HK+TQSNAILRYIARKHN+CGETEEEK
Sbjct: 1 MGDAPDYDRSQWLSEKFKLGLDFPNLPYLIDGSHKITQSNAILRYIARKHNLCGETEEEK 60
Query: 379 IRVDILENQAMDVRLQMARICYSPDFEKLKPGYLKEIPEILKCFSEFLGKRPWFAGDKLT 558
IRVDILENQAMDV Q+AR+CYSPDFEKLK YL+++P ++K FS+FLG+R WF G+K+T
Sbjct: 61 IRVDILENQAMDVSNQLARVCYSPDFEKLKVEYLEQLPGMVKLFSQFLGQRTWFVGEKIT 120
Query: 559 YVDFLAYDVLDRNRIFEPKCLDEFPNLKDFITRFEGLKKISAYMKSSRFHPNPMFLKIAV 738
+VDFLAYD+LD + IFEP CLD FPNLKDF+ RFE LK+ISAYMK+SRF P++ K+A
Sbjct: 121 FVDFLAYDILDLHLIFEPTCLDAFPNLKDFVARFEVLKRISAYMKTSRFLRTPLYTKVAT 180
Query: 739 WGNK 750
WGNK
Sbjct: 181 WGNK 184
>ref|XP_136255.4| PREDICTED: glutathione S-transferase Mu 1-like [Mus musculus].
Length = 196
Score = 276 bits (706), Expect = 2e-74
Identities = 139/203 (68%), Positives = 161/203 (79%)
Frame = +1
Query: 97 MTMIFGYWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLSDKFKLGLDFPNL 276
M M YWDI GLAHAI LLLEYTDS YEEK+YTM D P YDRSQWLS+ FKLGL+F NL
Sbjct: 1 MPMTLCYWDIHGLAHAIWLLLEYTDSCYEEKRYTMRDPPKYDRSQWLSE-FKLGLEFFNL 59
Query: 277 PYLIDGAHKLTQSNAILRYIARKHNMCGETEEEKIRVDILENQAMDVRLQMARICYSPDF 456
PYLIDG+HK+TQSNAILRY ARK+N+CGETEE K RV+IL+NQ MDV Q+ R+CYSPDF
Sbjct: 60 PYLIDGSHKITQSNAILRYTARKNNLCGETEE-KSRVEILKNQVMDVSSQLGRVCYSPDF 118
Query: 457 EKLKPGYLKEIPEILKCFSEFLGKRPWFAGDKLTYVDFLAYDVLDRNRIFEPKCLDEFPN 636
EKLK YL ++ S+FLGKR WF +K+T+VDFLAYD+LDR+ IFEP CLD F N
Sbjct: 119 EKLKAEYLVQLS------SQFLGKRTWFVSEKITFVDFLAYDILDRHLIFEPTCLDAFLN 172
Query: 637 LKDFITRFEGLKKISAYMKSSRF 705
LKDF+ E LKK+S YMK+S F
Sbjct: 173 LKDFVACVEELKKMSDYMKTSYF 195
>ref|XP_920855.1| PREDICTED: glutathione S-transferase Mu 1-like [Mus musculus].
Length = 196
Score = 276 bits (706), Expect = 2e-74
Identities = 139/203 (68%), Positives = 161/203 (79%)
Frame = +1
Query: 97 MTMIFGYWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLSDKFKLGLDFPNL 276
M M YWDI GLAHAI LLLEYTDS YEEK+YTM D P YDRSQWLS+ FKLGL+F NL
Sbjct: 1 MPMTLCYWDIHGLAHAIWLLLEYTDSCYEEKRYTMRDPPKYDRSQWLSE-FKLGLEFFNL 59
Query: 277 PYLIDGAHKLTQSNAILRYIARKHNMCGETEEEKIRVDILENQAMDVRLQMARICYSPDF 456
PYLIDG+HK+TQSNAILRY ARK+N+CGETEE K RV+IL+NQ MDV Q+ R+CYSPDF
Sbjct: 60 PYLIDGSHKITQSNAILRYTARKNNLCGETEE-KSRVEILKNQVMDVSSQLGRVCYSPDF 118
Query: 457 EKLKPGYLKEIPEILKCFSEFLGKRPWFAGDKLTYVDFLAYDVLDRNRIFEPKCLDEFPN 636
EKLK YL ++ S+FLGKR WF +K+T+VDFLAYD+LDR+ IFEP CLD F N
Sbjct: 119 EKLKAEYLVQLS------SQFLGKRTWFVSEKITFVDFLAYDILDRHLIFEPTCLDAFLN 172
Query: 637 LKDFITRFEGLKKISAYMKSSRF 705
LKDF+ E LKK+S YMK+S F
Sbjct: 173 LKDFVACVEELKKMSDYMKTSYF 195
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 33,208,380
Number of extensions: 918202
Number of successful extensions: 3534
Number of sequences better than 1.0e-05: 23
Number of HSP's gapped: 3502
Number of HSP's successfully gapped: 23
Length of query: 331
Length of database: 15,617,559
Length adjustment: 102
Effective length of query: 229
Effective length of database: 12,553,887
Effective search space: 2874840123
Effective search space used: 2874840123
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002214
(994 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001072152.1| glutathione S-transferase mu 2 [Sus scrofa]. 414 e-116
Alignment gi|XP_001924094.2| PREDICTED: glutathione S-transferase Mu 1-li... 380 e-106
Alignment gi|XP_003125913.1| PREDICTED: glutathione S-transferase Mu 5-li... 343 9e-95
Alignment gi|XP_003122501.1| PREDICTED: glutathione S-transferase P 1-lik... 89 4e-18
Alignment gi|XP_003357127.1| PREDICTED: hematopoietic prostaglandin D syn... 74 2e-13
Alignment gi|XP_003128840.1| PREDICTED: glutathione S-transferase A1-like... 65 4e-11
Alignment gi|XP_003128841.1| PREDICTED: glutathione S-transferase A4-like... 64 2e-10
Alignment gi|XP_003356871.1| PREDICTED: glutathione S-transferase A4-like... 64 2e-10
Alignment gi|NP_999554.1| glutathione S-transferase alpha M14 [Sus scrofa]. 59 4e-09
Alignment gi|NP_999015.1| glutathione S-transferase A2 [Sus scrofa]. 57 2e-08
>ref|NP_001072152.1| glutathione S-transferase mu 2 [Sus scrofa].
Length = 218
Score = 414 bits (1065), Expect = e-116
Identities = 197/218 (90%), Positives = 210/218 (96%)
Frame = +1
Query: 97 MTMIFGYWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLSDKFKLGLDFPNL 276
MTMI GYWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLSDKFKLGLDFPNL
Sbjct: 1 MTMILGYWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLSDKFKLGLDFPNL 60
Query: 277 PYLIDGAHKLTQSNAILRYIARKHNMCGETEEEKIRVDILENQAMDVRLQMARICYSPDF 456
PYLIDGAHKLTQSNAILRYIARKHNMCGETEEEKIR+DILENQAMDVRLQMARICYSPDF
Sbjct: 61 PYLIDGAHKLTQSNAILRYIARKHNMCGETEEEKIRMDILENQAMDVRLQMARICYSPDF 120
Query: 457 EKLKPGYLKEIPEILKCFSEFLGKRPWFAGDKLTYVDFLAYDVLDRNRIFEPKCLDEFPN 636
EKLKPGYLKEIPE +K FSEFLGKRPWFAGDKLTYVDFLAYDVLD RIF+PKCLDEFPN
Sbjct: 121 EKLKPGYLKEIPEKMKPFSEFLGKRPWFAGDKLTYVDFLAYDVLDLYRIFDPKCLDEFPN 180
Query: 637 LKDFITRFEGLKKISAYMKSSRFHPNPMFLKIAVWGNK 750
LK F++RFEGL++ISAYM+SSRF P+P++ K+A+WGNK
Sbjct: 181 LKAFLSRFEGLERISAYMRSSRFLPHPVYSKMAMWGNK 218
>ref|XP_001924094.2| PREDICTED: glutathione S-transferase Mu 1-like [Sus scrofa].
Length = 389
Score = 380 bits (977), Expect = e-106
Identities = 189/252 (75%), Positives = 209/252 (82%), Gaps = 4/252 (1%)
Frame = +1
Query: 7 CLLS---PASGSGEKFPGQL-PCXXXXXXXXXXNMTMIFGYWDIRGLAHAIRLLLEYTDS 174
CLL+ PA + FP L P +T+ GYWDIRGLAHAIRLLLEYT S
Sbjct: 140 CLLTARNPAQTVPQFFPDSLLPLPKASTEPSTTAITL--GYWDIRGLAHAIRLLLEYTGS 197
Query: 175 SYEEKKYTMGDAPDYDRSQWLSDKFKLGLDFPNLPYLIDGAHKLTQSNAILRYIARKHNM 354
+YEE+KY MGD PDYDRSQWL+++ KLGLDFPNLPYLIDG HKLTQSNAILRYIARKHNM
Sbjct: 198 NYEERKYMMGDPPDYDRSQWLNERSKLGLDFPNLPYLIDGPHKLTQSNAILRYIARKHNM 257
Query: 355 CGETEEEKIRVDILENQAMDVRLQMARICYSPDFEKLKPGYLKEIPEILKCFSEFLGKRP 534
CGETE+EKI+VDILE+Q MDVRL MAR+CYS DFEKLKPGY+ EIPE ++ FS FLGK P
Sbjct: 258 CGETEKEKIQVDILESQVMDVRLHMARVCYSSDFEKLKPGYVDEIPEKMRLFSAFLGKGP 317
Query: 535 WFAGDKLTYVDFLAYDVLDRNRIFEPKCLDEFPNLKDFITRFEGLKKISAYMKSSRFHPN 714
WFAG LTYVDFLAYD+LD +RIFEPKCLDEFPNLKDFITRFEGLKKISAYMKSSRF P
Sbjct: 318 WFAGHTLTYVDFLAYDILDLHRIFEPKCLDEFPNLKDFITRFEGLKKISAYMKSSRFLPR 377
Query: 715 PMFLKIAVWGNK 750
P+FLKIA+WGNK
Sbjct: 378 PLFLKIAMWGNK 389
>ref|XP_003125913.1| PREDICTED: glutathione S-transferase Mu 5-like [Sus scrofa].
Length = 225
Score = 343 bits (880), Expect = 9e-95
Identities = 161/217 (74%), Positives = 188/217 (86%)
Frame = +1
Query: 100 TMIFGYWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLSDKFKLGLDFPNLP 279
+M+ GYWDIRGLAHAIR+LLE+TD+SYEEK+Y G+APDYDRSQWL K+KL LDFPNLP
Sbjct: 6 SMVLGYWDIRGLAHAIRMLLEFTDTSYEEKRYICGEAPDYDRSQWLDVKYKLDLDFPNLP 65
Query: 280 YLIDGAHKLTQSNAILRYIARKHNMCGETEEEKIRVDILENQAMDVRLQMARICYSPDFE 459
YL+DG +KLTQSNAILRYIARKHNMCGETEEEKIRVDI+ENQ MD R+Q+ R+CYSPD E
Sbjct: 66 YLMDGKNKLTQSNAILRYIARKHNMCGETEEEKIRVDIMENQIMDFRMQLIRLCYSPDHE 125
Query: 460 KLKPGYLKEIPEILKCFSEFLGKRPWFAGDKLTYVDFLAYDVLDRNRIFEPKCLDEFPNL 639
KLKP YL+++P LK FS FLGK WFAG+KLT+VDFL YDVLD+NRIFEP+CLDEFPNL
Sbjct: 126 KLKPQYLEQLPGQLKQFSLFLGKYSWFAGEKLTFVDFLTYDVLDQNRIFEPRCLDEFPNL 185
Query: 640 KDFITRFEGLKKISAYMKSSRFHPNPMFLKIAVWGNK 750
K F+ RFE L+KI+AYM+S RF P+ K+A WGNK
Sbjct: 186 KAFMCRFEALEKIAAYMQSDRFLKMPINNKMAQWGNK 222
>ref|XP_003122501.1| PREDICTED: glutathione S-transferase P 1-like [Sus scrofa].
Length = 239
Score = 89.0 bits (219), Expect = 4e-18
Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 7/210 (3%)
Frame = +1
Query: 115 YWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLSDKFKLGLDFPNLPYLIDG 294
Y+ RG A+R+LL S++E+ T + WL K + LP DG
Sbjct: 37 YFPARGRCEAMRMLLADQGQSWKEEVVT--------KETWLQGPLKATCLYGQLPKFQDG 88
Query: 295 AHKLTQSNAILRYIARKHNMCGETEEEKIRVDILENQAMDVRLQMARIC---YSPDFEKL 465
L QSNAILR++ R + G+ E +D++ + D+R R+C ++E+
Sbjct: 89 DLTLYQSNAILRHLGRSLGLYGKDLREAALLDMVNDGVEDLR----RLCSHLIRHNYEED 144
Query: 466 KPGYLKEIPEILKCFSEFL----GKRPWFAGDKLTYVDFLAYDVLDRNRIFEPKCLDEFP 633
K Y++E+P L+ F L G + + G ++++ D+ D+L +++ P CLD FP
Sbjct: 145 KARYVEELPGHLRPFETLLSQNQGGQAFIVGSQISFADYNLLDLLLSHQVLVPSCLDAFP 204
Query: 634 NLKDFITRFEGLKKISAYMKSSRFHPNPMF 723
L ++ R K+ A++ S P+F
Sbjct: 205 LLSAYVARLSARPKLKAFLASPEHVNRPIF 234
>ref|XP_003357127.1| PREDICTED: hematopoietic prostaglandin D synthase-like [Sus
scrofa].
Length = 199
Score = 73.6 bits (179), Expect = 2e-13
Identities = 53/199 (26%), Positives = 96/199 (48%), Gaps = 6/199 (3%)
Frame = +1
Query: 115 YWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLSDKFKLGLDFPNLPYL-ID 291
Y+++RG A IR + Y D YE+ + D P + K L F +P L +D
Sbjct: 8 YFNMRGRAEIIRYIFAYLDIKYEDHRIEQADWP----------QIKPTLPFGKIPILEVD 57
Query: 292 GAHKLTQSNAILRYIARKHNMCGETEEEKIRVDILENQAMDVRLQMARICYSPDFEKLKP 471
G + L QS AI RY+A+ ++ G+T+ E+ +VD + + D M+ ++ + +K
Sbjct: 58 GLN-LHQSLAIARYLAKNTDLAGKTDLEQCQVDAIVDTLDDF---MSCFPWAEKKQDVKD 113
Query: 472 GYLKEI-----PEILKCFSEFLGKRPWFAGDKLTYVDFLAYDVLDRNRIFEPKCLDEFPN 636
E+ P +L+ +LG++ WF G+ +T+ DF +F+P LD P
Sbjct: 114 QIFNELLTCEAPHLLQDLDTYLGEKEWFIGNSVTWADFYWEICSTTLLVFKPDLLDIHPR 173
Query: 637 LKDFITRFEGLKKISAYMK 693
L + + + I+ +++
Sbjct: 174 LVTLRKKVQSIPAIANWIQ 192
>ref|XP_003128840.1| PREDICTED: glutathione S-transferase A1-like [Sus scrofa].
Length = 223
Score = 65.5 bits (158), Expect = 4e-11
Identities = 59/203 (29%), Positives = 88/203 (43%), Gaps = 10/203 (4%)
Frame = +1
Query: 115 YWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLSDKFKLGLD----FPNLPY 282
Y+D RG A IR LL +EEK L D KL D F +P
Sbjct: 9 YFDGRGRAEVIRWLLASAGVEFEEKFVDT-----------LEDLEKLRNDGSLMFQQVPM 57
Query: 283 LIDGAHKLTQSNAILRYIARKHNMCGETEEEKIRVDILENQAMDV--RLQMARICYSPDF 456
+ KL Q+ AIL YIA K+++CG+ +E+ VD+ D+ + + IC PD
Sbjct: 58 IEIDGMKLVQTRAILNYIATKYDLCGKDIKERAAVDMYTEGIADIGEMIMLLPIC-PPDE 116
Query: 457 EKLKPGYLKE--IPEILKCFSEFLGK--RPWFAGDKLTYVDFLAYDVLDRNRIFEPKCLD 624
+ K +KE L F + L + + G+KL+ D ++L +P L
Sbjct: 117 KDAKMALIKERVSNHYLPAFEKVLKSHGQDYLVGNKLSRADIQLVELLYYVEELDPSLLA 176
Query: 625 EFPNLKDFITRFEGLKKISAYMK 693
FP LK TR L + +++
Sbjct: 177 NFPLLKALKTRVSNLPTVKKFLQ 199
>ref|XP_003128841.1| PREDICTED: glutathione S-transferase A4-like [Sus scrofa].
Length = 222
Score = 63.5 bits (153), Expect = 2e-10
Identities = 54/212 (25%), Positives = 93/212 (43%), Gaps = 11/212 (5%)
Frame = +1
Query: 115 YWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLSDKFKLGLDFPNLPYLIDG 294
Y+ RG +IR LL +EE+ + R Q+ K L F +P +
Sbjct: 9 YFRGRGRMESIRWLLAAAGVEFEEEFFET-------REQYEKLKKDGLLLFGQVPLVEID 61
Query: 295 AHKLTQSNAILRYIARKHNMCGETEEEKIRVDILENQAMDVRLQMARICYSPD------- 453
LTQ+ AIL Y+A K+N+ G+ +E++R+D+ + +D+ + +A + P
Sbjct: 62 GMALTQTRAILSYLAAKYNLHGKDLKERVRIDMYADGTLDLMMMVALAAFKPPGEKEENL 121
Query: 454 ---FEKLKPGYLKEIPEILKCFSEFLGKRPWFAGDKLTYVDFLAYDVLDRNRIFEPKCLD 624
EK K Y +ILK E + G+K ++ D + + + L
Sbjct: 122 ALVVEKAKTRYFPVFEKILKDQGE-----DFLVGNKFSWADIQLLEAILMMEELDASVLS 176
Query: 625 EFPNLKDFITRFEGLKKISAYMK-SSRFHPNP 717
+FP L+ F TR + I +++ S+ P P
Sbjct: 177 DFPLLQAFKTRISNIPTIKKFLQPGSQRKPPP 208
>ref|XP_003356871.1| PREDICTED: glutathione S-transferase A4-like [Sus scrofa].
Length = 222
Score = 63.5 bits (153), Expect = 2e-10
Identities = 54/212 (25%), Positives = 93/212 (43%), Gaps = 11/212 (5%)
Frame = +1
Query: 115 YWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLSDKFKLGLDFPNLPYLIDG 294
Y+ RG +IR LL +EE+ + R Q+ K L F +P +
Sbjct: 9 YFRGRGRMESIRWLLAAAGVEFEEEFFET-------REQYEKLKKDGLLLFGQVPLVEID 61
Query: 295 AHKLTQSNAILRYIARKHNMCGETEEEKIRVDILENQAMDVRLQMARICYSPD------- 453
LTQ+ AIL Y+A K+N+ G+ +E++R+D+ + +D+ + +A + P
Sbjct: 62 GMALTQTRAILSYLAAKYNLHGKDLKERVRIDMYADGTLDLMMMVALAAFKPPGEKEENL 121
Query: 454 ---FEKLKPGYLKEIPEILKCFSEFLGKRPWFAGDKLTYVDFLAYDVLDRNRIFEPKCLD 624
EK K Y +ILK E + G+K ++ D + + + L
Sbjct: 122 ALVVEKAKTRYFPVFEKILKDQGE-----DFLVGNKFSWADIQLLEAILMMEELDASVLS 176
Query: 625 EFPNLKDFITRFEGLKKISAYMK-SSRFHPNP 717
+FP L+ F TR + I +++ S+ P P
Sbjct: 177 DFPLLQAFKTRISNIPTIKKFLQPGSQRKPPP 208
>ref|NP_999554.1| glutathione S-transferase alpha M14 [Sus scrofa].
Length = 222
Score = 58.9 bits (141), Expect = 4e-09
Identities = 57/213 (26%), Positives = 89/213 (41%), Gaps = 5/213 (2%)
Frame = +1
Query: 106 IFGYWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLSDKFKLGLDFPNLPYL 285
I Y++ RG IR LL +EEK + D + +D L F +P +
Sbjct: 6 ILHYFNGRGRMECIRWLLAAAGVEFEEKFIKTPE----DLDKLTNDGSLL---FQQVPMV 58
Query: 286 IDGAHKLTQSNAILRYIARKHNMCGETEEEKIRVDILENQAMDVRLQMARICYSPDFEK- 462
KL Q+ AIL YIA K+N+ G+ +E+ +D+ D+ + + P EK
Sbjct: 59 EIDGMKLVQTRAILNYIATKYNLYGKDAKERALIDMYTEGVADLGEMILLLPLCPPNEKD 118
Query: 463 LKPGYLKE--IPEILKCFSEFLGK--RPWFAGDKLTYVDFLAYDVLDRNRIFEPKCLDEF 630
K +KE L F + L + + G+KL+ D ++L +P L F
Sbjct: 119 AKVASIKEKSTNRYLPAFEKVLKSHGQDYLVGNKLSRADIQLVELLYYVEELDPSLLANF 178
Query: 631 PNLKDFITRFEGLKKISAYMKSSRFHPNPMFLK 729
P LK TR L + +++ PM K
Sbjct: 179 PLLKALKTRVSNLPTVKKFLQPGSQRKPPMDAK 211
>ref|NP_999015.1| glutathione S-transferase A2 [Sus scrofa].
Length = 223
Score = 57.0 bits (136), Expect = 2e-08
Identities = 55/201 (27%), Positives = 89/201 (44%), Gaps = 5/201 (2%)
Frame = +1
Query: 106 IFGYWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLSDKFKLGLDFPNLPYL 285
I Y++ RG IR LL +EEK + P+ D ++ +D L F +P +
Sbjct: 6 ILHYFNGRGRMECIRWLLAAAGVEFEEKFI---ENPN-DLNKLTNDGSLL---FQQVPMV 58
Query: 286 IDGAHKLTQSNAILRYIARKHNMCGETEEEKIRVDILENQAMDVRLQMARICYSPDFEK- 462
KL Q+ AIL YIA K+N+ G+ +E+ +D+ D+ + + P EK
Sbjct: 59 EIDGMKLVQTRAILNYIATKYNLYGKDAKERALIDMYTEGVADLGEMILLLPLCPPNEKD 118
Query: 463 LKPGYLKE--IPEILKCFSEFLGK--RPWFAGDKLTYVDFLAYDVLDRNRIFEPKCLDEF 630
K +KE L F + L + + G+KL+ D ++L +P L F
Sbjct: 119 AKVASIKEKSTNRYLPAFEKVLKSHGQDYLVGNKLSRADIQLVELLYYVEELDPSLLANF 178
Query: 631 PNLKDFITRFEGLKKISAYMK 693
P LK TR L + +++
Sbjct: 179 PLLKALKTRVSNLPTVKKFLQ 199
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 24,621,083
Number of extensions: 690897
Number of successful extensions: 2521
Number of sequences better than 1.0e-05: 10
Number of HSP's gapped: 2505
Number of HSP's successfully gapped: 10
Length of query: 331
Length of database: 11,343,932
Length adjustment: 99
Effective length of query: 232
Effective length of database: 8,879,129
Effective search space: 2059957928
Effective search space used: 2059957928
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002214
(994 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr13 638 e-180
Sscrofa_Chr04 605 e-170
gb|GL892901.1| Sus scrofa unplaced genomic scaffold chrU_scaffol... 254 8e-65
gb|GL896251.1| Sus scrofa unplaced genomic scaffold chrU_scaffold61 153 2e-34
>Sscrofa_Chr13
|| Length = 218635234
Score = 638 bits (322), Expect = e-180
Identities = 562/642 (87%)
Strand = Plus / Minus
Query: 112 ggttactgggacatccgcgggctggcccacgccatccgcctgctcctggagtacacagac 171
|||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||
Sbjct: 161088588 ggttactgggacatccgcgggctggctcacgccatccgcctgctcctggaatacacaggt 161088529
Query: 172 tccagctacgaggagaagaagtacacgatgggggacgctcccgactatgacagaagccag 231
|| | || ||||||| ||| |||| |||||| || |||| ||||||||||||||||||
Sbjct: 161088528 tcaaattatgaggagaggaaatacatgatgggagatcctcctgactatgacagaagccag 161088469
Query: 232 tggctgagtgacaaattcaagctgggcctggacttccccaatctgccctacttaattgac 291
||| ||| ||| | || ||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 161088468 tggttgaatgaaagatccaagctgggcctggacttccccaatttgccctacttaattgat 161088409
Query: 292 ggggctcacaagctgacccagagcaacgccatcctgcgctacattgctcgcaagcacaac 351
||| |||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 161088408 gggcctcacaagctcacccagagcaatgccatccttcgctacattgctcgcaagcacaac 161088349
Query: 352 atgtgtggggagacagaggaggagaagattcgagtggacattttggagaaccaagctatg 411
|||||||||||||||||| |||||||||||| |||||||||| |||||| ||| | ||||
Sbjct: 161088348 atgtgtggggagacagagaaggagaagattcaagtggacattctggagagccaggttatg 161088289
Query: 412 gatgtccgtttgcagatggccaggatctgctacagccctgactttgagaaactgaagcct 471
||||| || || || ||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 161088288 gatgtacgcttacacatggccagggtctgctacagctctgactttgagaaactgaagcct 161088229
Query: 472 gggtacttgaaggagatccctgaaatcctgaagtgcttctctgagtttctggggaagagg 531
|| || || | ||||||||||| | ||| | |||||| | |||| |||||||| ||
Sbjct: 161088228 ggttatgtggacgagatccctgagaagatgaggctcttctcagcgtttttggggaagggg 161088169
Query: 532 ccttggtttgcaggggacaagctcacctatgtggatttcctggcttacgatgtccttgac 591
|||||||||||||| ||| |||||||||||| ||||||||||||||||| |||||||
Sbjct: 161088168 ccttggtttgcaggacacacgctcacctatgtagatttcctggcttacgacatccttgat 161088109
Query: 592 cggaaccgcatatttgaacccaagtgcctggatgaattcccaaacctgaaagacttcatc 651
| | ||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 161088108 ctacatcgcatatttgagcccaagtgcctggatgaattcccaaacctgaaagacttcatc 161088049
Query: 652 actcgctttgagggcctaaagaagatctctgcctacatgaagtccagccgcttccaccca 711
|| ||||||||||| || |||||||||||||| ||||||||||| || ||||||| ||||
Sbjct: 161088048 acccgctttgaggggcttaagaagatctctgcttacatgaagtctagtcgcttcctccca 161087989
Query: 712 aacccaatgtttctaaagattgctgtgtggggcaacaagtag 753
||| |||||||||||||||| ||||||| |||||||||
Sbjct: 161087988 cgccctttgtttctaaagattgccatgtggggtaacaagtag 161087947
>Sscrofa_Chr04
|| Length = 143465943
Score = 605 bits (305), Expect = e-170
Identities = 326/333 (97%)
Strand = Plus / Minus
Query: 662 agggcctaaagaagatctctgcctacatgaagtccagccgcttccacccaaacccaatgt 721
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120751524 agggcctaaagaagatctctgcctacatgaagtccagccgcttccacccaaacccaatgt 120751465
Query: 722 ttctaaagattgctgtgtggggcaacaagtagagtcctggaagaccaggagatggaataa 781
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120751464 ttctaaagattgctgtgtggggcaacaagtagagtcctggaagaccaggagatggaataa 120751405
Query: 782 ggagccagtgctgtgtttgctgtgccagcaccctggagaacacctggacttcttgcaccc 841
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120751404 ggagccagtgctgtgtttgctgtgccagcaccctggagaacacctggacttcttgcaccc 120751345
Query: 842 agaaccatctttccttttctttccccttctattcactctaggtgccctattgaccccctt 901
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120751344 agaaccatctttccttttctttccccttctattcactctaggtgccctattgaccccctt 120751285
Query: 902 atctccctcccaaccccttttccatccatccctttcagcttcagtccccacttatcttca 961
||||||||||||||||| ||||||||||||| || ||||||||||||||||||||||||
Sbjct: 120751284 atctccctcccaaccccctttccatccatcctttcaagcttcagtccccacttatcttca 120751225
Query: 962 gcaaagtccttctctcaccccatgttatccctc 994
||||||| | |||||||||| ||||||||||||
Sbjct: 120751224 gcaaagttcctctctcacccaatgttatccctc 120751192
Score = 218 bits (110), Expect = 4e-54
Identities = 113/114 (99%)
Strand = Plus / Minus
Query: 551 agctcacctatgtggatttcctggcttacgatgtccttgaccggaaccgcatatttgaac 610
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 120784400 agctcacctatgtggatttcctggcttacgatgtccttgaccggaaccgcatattcgaac 120784341
Query: 611 ccaagtgcctggatgaattcccaaacctgaaagacttcatcactcgctttgagg 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120784340 ccaagtgcctggatgaattcccaaacctgaaagacttcatcactcgctttgagg 120784287
Score = 190 bits (96), Expect = 1e-45
Identities = 96/96 (100%)
Strand = Plus / Minus
Query: 457 gagaaactgaagcctgggtacttgaaggagatccctgaaatcctgaagtgcttctctgag 516
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120784580 gagaaactgaagcctgggtacttgaaggagatccctgaaatcctgaagtgcttctctgag 120784521
Query: 517 tttctggggaagaggccttggtttgcaggggacaag 552
||||||||||||||||||||||||||||||||||||
Sbjct: 120784520 tttctggggaagaggccttggtttgcaggggacaag 120784485
Score = 79.8 bits (40), Expect = 3e-12
Identities = 55/60 (91%)
Strand = Plus / Minus
Query: 299 acaagctgacccagagcaacgccatcctgcgctacattgctcgcaagcacaacatgtgtg 358
||||||| ||||||||||| |||||| |||||||||| || |||||||||||||||||||
Sbjct: 120828915 acaagctcacccagagcaatgccatcttgcgctacatcgcccgcaagcacaacatgtgtg 120828856
>gb|GL892901.1| Sus scrofa unplaced genomic scaffold chrU_scaffold172
Length = 210
Score = 254 bits (128), Expect = 8e-65
Identities = 131/132 (99%)
Strand = Plus / Plus
Query: 1 gtttcctgtctcctttcaccagcgagcgggtcaggggagaaatttccagggcagcttccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68 gtttcctgtctcctttcaccagcgagcgggtcaggggagaaatttccagggcagcttccc 127
Query: 61 tgcagcctctcccttcggagctcagacagcagcaacatgacgatgatcttcggttactgg 120
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 128 tgcagcctctcccttcggagctcagacagcagcaacatgacgatgatcctcggttactgg 187
Query: 121 gacatccgcggg 132
||||||||||||
Sbjct: 188 gacatccgcggg 199
>gb|GL896251.1| Sus scrofa unplaced genomic scaffold chrU_scaffold61
Length = 124
Score = 153 bits (77), Expect = 2e-34
Identities = 77/77 (100%)
Strand = Plus / Minus
Query: 132 gctggcccacgccatccgcctgctcctggagtacacagactccagctacgaggagaagaa 191
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110 gctggcccacgccatccgcctgctcctggagtacacagactccagctacgaggagaagaa 51
Query: 192 gtacacgatgggggacg 208
|||||||||||||||||
Sbjct: 50 gtacacgatgggggacg 34
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 30,383,179
Number of extensions: 304
Number of successful extensions: 304
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 302
Number of HSP's successfully gapped: 8
Length of query: 994
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 973
Effective length of database: 2,808,413,156
Effective search space: 2732586000788
Effective search space used: 2732586000788
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 29 (58.0 bits)