Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002234
(2067 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001071580.1| acyl-CoA synthetase family member 2, mitocho... 1085 0.0
Alignment gi|XP_002698030.1| PREDICTED: acyl-CoA synthetase medium-chain ... 124 3e-28
Alignment gi|XP_002698062.1| PREDICTED: acyl-CoA synthetase medium-chain ... 122 2e-27
Alignment gi|NP_777107.1| acyl-coenzyme A synthetase ACSM1, mitochondrial... 118 2e-26
Alignment gi|NP_001095422.1| acyl-CoA synthetase medium-chain family memb... 102 1e-21
Alignment gi|XP_002698032.1| PREDICTED: acyl-coenzyme A synthetase ACSM2,... 102 1e-21
Alignment gi|XP_613318.4| PREDICTED: acyl-coenzyme A synthetase ACSM2, mi... 102 1e-21
Alignment gi|NP_777171.1| acetyl-coenzyme A synthetase 2-like, mitochondr... 101 3e-21
Alignment gi|NP_001030240.1| acyl-CoA synthetase family member 3, mitocho... 100 7e-21
Alignment gi|XP_586827.3| PREDICTED: acyl-CoA synthetase medium-chain fam... 89 1e-17
>ref|NP_001071580.1| acyl-CoA synthetase family member 2, mitochondrial precursor [Bos
taurus].
Length = 615
Score = 1085 bits (2806), Expect = 0.0
Identities = 532/615 (86%), Positives = 570/615 (92%)
Frame = +1
Query: 106 MAVYLGMLRVVRLCAGRPEVLGAGGGLSRVWQEARLWGVRPLSSGEVDHTAPLPIGGLSY 285
MAVY+GMLRV RLCA P VLGA GLSRVWQEARLWGVRPLSSGE+DHT PLP+GG SY
Sbjct: 1 MAVYVGMLRVARLCARSPRVLGARVGLSRVWQEARLWGVRPLSSGELDHTVPLPVGGFSY 60
Query: 286 IQGNTKLRLINKTVGWCLDATAQKIPDKEALVVFHENIRLTFAQLKEQVDKAAAGLLSIG 465
+QG+ L L NKTVG CLDATAQ++PD+EALVV HENIRLTFAQLKE+VDKAA+GLLSIG
Sbjct: 61 VQGHVGLHLSNKTVGRCLDATAQRVPDQEALVVHHENIRLTFAQLKEEVDKAASGLLSIG 120
Query: 466 LRKGDRLGMWGPNSYAWVLIQLATAQAGIILVSVNPAYQAPELEYALKKVGCKALVFPKQ 645
LRKGDRLGMWGPNSYAWVL+QLATAQAGIILVSVNPAYQA ELEYALKKVGCKALVFPKQ
Sbjct: 121 LRKGDRLGMWGPNSYAWVLMQLATAQAGIILVSVNPAYQAMELEYALKKVGCKALVFPKQ 180
Query: 646 FKTQQYYNILKQICPEVEKAKPGALKSQRLPDLTIVISVDTPLPGTLFLDDVVAAGNQEQ 825
FKTQQYYNILKQICPEVEKA+PGALKSQRLPDLT VISVD LPGTL LD+VVAAG+QEQ
Sbjct: 181 FKTQQYYNILKQICPEVEKAQPGALKSQRLPDLTTVISVDAHLPGTLLLDEVVAAGSQEQ 240
Query: 826 HLAQLRHTQKFLSCHDPINIQFTSGTTGSPKGATLSHYNIVNNSNMIGERLQLSQKTAEK 1005
+L +LRHTQ+FLSCHDPINIQFTSGTTGSPKGATLSHYNIVNN+NMIG+RL+L QKT E+
Sbjct: 241 NLTRLRHTQQFLSCHDPINIQFTSGTTGSPKGATLSHYNIVNNANMIGQRLRLHQKTPEE 300
Query: 1006 SRMVLPTPLYHCLGSVGGTMVSLMHGVTLILSSPVFDGKKALEAISRERGSFLYGTPTMF 1185
SR+VLP+PLYHCLGSVGGTMVSLMHGVTLIL SPVF+GKK LEAISRERG FLYGTPTMF
Sbjct: 301 SRVVLPSPLYHCLGSVGGTMVSLMHGVTLILCSPVFEGKKTLEAISRERGCFLYGTPTMF 360
Query: 1186 VDILNQPDFSSYDISAICGGVIAGSPVPPELIRAIINKMNMKELVVAYGTTENSPVTFMN 1365
VD+LNQPDFSSYDIS + GGVIAGSP PPELIRAIINK+NMKELVVAYGTTENSPVTFMN
Sbjct: 361 VDVLNQPDFSSYDISTMRGGVIAGSPAPPELIRAIINKLNMKELVVAYGTTENSPVTFMN 420
Query: 1366 FPEDTMEQKAESVGRVMPHTEAQIMNMETRTLAELNTPGELCIRGYCVMQGYWGDPQKTD 1545
F EDT+EQKAESVGRVMPHTEAQI+N ET TL ELNTPGELCIRGYCVM GYWG+PQKT+
Sbjct: 421 FTEDTVEQKAESVGRVMPHTEAQIVNTETGTLTELNTPGELCIRGYCVMLGYWGEPQKTE 480
Query: 1546 EVIGQDKWYRTGDIAVMDEQGFCRIVGRAKDMIIRGGENIYPAELEDFFHTHPXXXXXXX 1725
E IGQDKWYRTGDIA+MDEQGFC+IVGR+KDMIIRGGENIYPAELEDFFHTHP
Sbjct: 481 EAIGQDKWYRTGDIAMMDEQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPQVQEVQV 540
Query: 1726 XXXKDNRMGEEICACIRLKKGEKTTAEEIKAFCKGKISHFKIPRYIVFVTDYPLTVSGKV 1905
KD+RMGEEICACIRLK+GEKTTAEEIKAFCKGKISHFKIPRYIVFVT+YPLTVSGK+
Sbjct: 541 VGVKDDRMGEEICACIRLKEGEKTTAEEIKAFCKGKISHFKIPRYIVFVTNYPLTVSGKI 600
Query: 1906 QKFKLREQMEQRLNL 1950
QKFKLREQMEQ LNL
Sbjct: 601 QKFKLREQMEQHLNL 615
>ref|XP_002698030.1| PREDICTED: acyl-CoA synthetase medium-chain family member 5-like [Bos
taurus].
Length = 590
Score = 124 bits (311), Expect = 3e-28
Identities = 138/524 (26%), Positives = 224/524 (42%), Gaps = 13/524 (2%)
Frame = +1
Query: 397 IRLTFAQLKEQVDKAAAGLL-SIGLRKGDRLGMWGPNSYAWVLIQLATAQAGIILVSVNP 573
++ +F +L EQ KAA L + GL+ GDR+ + P W L+ +A + G I++
Sbjct: 88 VKWSFEELGEQSRKAANVLEGACGLQPGDRMMLVLPRLPEWWLVSVACMRTGAIMIPGIS 147
Query: 574 AYQAPELEYALKKVGCKALVFPKQFKTQQYYNILKQICPEVEKAKPGALKSQRLPDLTIV 753
+L++ L+ KA++ + + + CP ++ T +
Sbjct: 148 QLTEKDLKFRLQASRAKAIITSDSLAPR--VDAISADCPSLQ---------------TKL 190
Query: 754 ISVDTPLPGTLFLDDVVAAGNQEQHLAQLRHTQKFLSCHDPINIQFTSGTTGSPKGATLS 933
+ D+ PG + +++ E + A+ R DP+ I FTSGTTG+PK +
Sbjct: 191 LVSDSYRPGWMNFRELLWEAATEHNCARTRG-------QDPVAIYFTSGTTGTPK--MVE 241
Query: 934 HYNIVNNSNMIGERLQLSQKTAEKSRMVLPTPLYHCLGSVGGTMVSLMHGVTLILSS-PV 1110
H + + T +S + T + + + +G + + P
Sbjct: 242 HTQASYGLGFVASGRRWVALT--ESDIFWNTTDTGWVKAAWTLFSAWPNGSCIFVHELPR 299
Query: 1111 FDGKKALEAISRERGSFLYGTPTMFVDILNQPDFSSYDISAICGGVIAGSPVPPELIRAI 1290
FD K L +SR + L PTMF +L Q D + Y ++ V G + P+ +R
Sbjct: 300 FDAKFILNTLSRFPITTLCCVPTMF-RLLVQEDLTRYQFQSLRHCVTGGEALTPD-VREK 357
Query: 1291 INKMNMKELVVAYGTTENSPVTFMNFPEDTMEQKAESVGRVMPHTEAQIMNMETRTLAEL 1470
EL YG +E V P+ M+ K+ S+G+ P + Q+++ E L
Sbjct: 358 WKSQTGLELHEGYGQSET--VVICANPKG-MKIKSGSMGKASPPYDVQVVDEEGNILPP- 413
Query: 1471 NTPGELCIR-----GYCVMQGYWGDPQKTDEVIGQDKWYRTGDIAVMDEQGFCRIVGRAK 1635
G + IR +C Y +P+KT D +Y TGD A MD+ G+ +GR
Sbjct: 414 GEEGNVAIRVRPTRPFCFFTCYLDNPEKTAASERGD-FYITGDRAHMDKDGYFWFMGRND 472
Query: 1636 DMIIRGGENIYPAELEDFFHTHPXXXXXXXXXXKDNRMGEEICACIRLKKG------EKT 1797
D+I I P E+E HP D GE + A I L EK
Sbjct: 473 DVINSSSYRIGPVEVESALAEHPAVLESAVVSSPDPIRGEVVKAFIVLSPAYSSHDPEKL 532
Query: 1798 TAEEIKAFCKGKISHFKIPRYIVFVTDYPLTVSGKVQKFKLREQ 1929
T +E++ K + +K PR + FV++ P TVSGK+Q+ KLR Q
Sbjct: 533 T-QELQEHVKRVTAPYKYPRKMAFVSELPKTVSGKIQRSKLRSQ 575
>ref|XP_002698062.1| PREDICTED: acyl-CoA synthetase medium-chain family member 4 [Bos
taurus].
Length = 580
Score = 122 bits (305), Expect = 2e-27
Identities = 132/524 (25%), Positives = 219/524 (41%), Gaps = 12/524 (2%)
Frame = +1
Query: 391 ENIRLTFAQLKEQVDKAAAGLLS-IGLRKGDRLGMWGPNSYAWVLIQLATAQAGIILVSV 567
+ ++ +F +L KAA L GL +GDR+ + P W LI +A + G++ +
Sbjct: 85 DEVKWSFGELGSLSRKAANVLTKPCGLERGDRVAVILPRIPEWWLINVACMRTGLVFMPG 144
Query: 568 NPAYQAPELEYALKKVGCKALVFPKQFKTQQYYNILKQICPEVEKAKPGALKSQRLPDLT 747
A ++ Y L K +V +++ ++ I E K L S D
Sbjct: 145 TTQLTAKDILYRLHASKAKCIV-----ASEEVIPAVESIVSECPDLKTKLLVSPHSQD-- 197
Query: 748 IVISVDTPLPGTLFLDDVVAAGNQEQHLAQLRHTQKFLSCHDPINIQFTSGTTGSPKGAT 927
G L ++ + E H+ +P+ I FTSGTTGSPK A
Sbjct: 198 ----------GWLSFPELFQTASAE-------HSCVETGSQEPMAIYFTSGTTGSPKMAQ 240
Query: 928 LSHYNIVNNSNMIGERLQLSQKTAEKSRMVLPTPLYHCLGSVGGTMVSLMHGVTLILSSP 1107
S ++ + G R L K+ + + T ++G S + G + +
Sbjct: 241 HSQSSLGIGYTLCG-RYWLDLKSTDIIWNMSDTGWIKA--AIGSVFSSWLQGACVFVHRM 297
Query: 1108 V-FDGKKALEAISRERGSFLYGTPTMFVDILNQPDFSSYDISAICGGVIAGSPVPPELIR 1284
FD L+ ++ + L PT++ +L Q D Y + + G P+ PE++
Sbjct: 298 AQFDTDTFLDTLTTYPITTLCSAPTVY-RMLVQKDLKRYKFKKLRHCLTGGEPLNPEVLE 356
Query: 1285 AIINKMNMKELVVAYGTTENSPVTFMNFPEDTMEQKAESVGRVMPHTEAQIMNMETRTLA 1464
+ + EL YG TE V + + E K S+G+ + + QI++ E +
Sbjct: 357 QWKVQTGL-ELYEGYGQTE---VGIICANQKGQEIKPGSMGKGVLPYDVQIID-ENGNIL 411
Query: 1465 ELNTPGELCIR-----GYCVMQGYWGDPQKTDEVIGQDKWYRTGDIAVMDEQGFCRIVGR 1629
GE+ +R +C Y +P+KT I + +Y TGD VMD G+ VGR
Sbjct: 412 PPGKEGEIALRLTSTRPFCFFSEYVDNPEKTAATI-RGNFYVTGDRGVMDSDGYFWFVGR 470
Query: 1630 AKDMIIRGGENIYPAELEDFFHTHPXXXXXXXXXXKDNRMGEEICACIRLKKGEKTT--- 1800
A D+II G I P E+E HP D GE + A + L K++
Sbjct: 471 ADDVIISSGYRIGPFEVESALIEHPAVVESAVVSSPDPVRGEVVKAFVVLSAPFKSSNPE 530
Query: 1801 --AEEIKAFCKGKISHFKIPRYIVFVTDYPLTVSGKVQKFKLRE 1926
E++ K + +K PR + FV + P T++GK+++ LR+
Sbjct: 531 KLTLELQDHVKKSTAPYKYPRKVEFVKELPKTITGKIKRNVLRD 574
>ref|NP_777107.1| acyl-coenzyme A synthetase ACSM1, mitochondrial [Bos taurus].
Length = 577
Score = 118 bits (296), Expect = 2e-26
Identities = 140/537 (26%), Positives = 231/537 (43%), Gaps = 24/537 (4%)
Frame = +1
Query: 391 ENIRLTFAQLKEQVDKAAAGLL-SIGLRKGDRLGMWGPNSYAWVLIQLATAQAGIILVSV 567
+ ++ +F ++ + + A L + GL+ GDRL + P W L+ + + GII +
Sbjct: 82 DEVKWSFREMTDLTCRTANVLTQTCGLQTGDRLALILPRVPEWWLVCVGCIRTGIIFMPG 141
Query: 568 NPAYQAPELEYALKKVGCKALVFPKQFKTQQYYNILKQICPEVEKAKPGALKSQRLPDL- 744
+A ++ Y L+ G KA+V + PEVE P P L
Sbjct: 142 TTQMKAKDILYRLQVSGAKAIV------------TTDTLAPEVESVAP------ECPSLK 183
Query: 745 TIVISVDTPLPGTLFLDDVVAAGNQEQHLAQLRHTQKFLSCHDPINIQFTSGTTGSPKGA 924
T ++ D G L +V + + + H+ T DP+ I FTSGTTG PK A
Sbjct: 184 TKLLVSDHSREGWLDFRSLVKSASPD-HICIKSKTL------DPMAIFFTSGTTGFPKMA 236
Query: 925 TLSHYNIVNNSNMIGERLQLSQKTAEKSRMVLPTPLYHCLGSVGGTMVSL-------MHG 1083
SH G L+ K + + ++ CL G + +L G
Sbjct: 237 KHSH----------GFALRSYFPACRKLLQLKMSDVFWCLSDTGWILAALGSLLEPWTAG 286
Query: 1084 VTLILSS-PVFDGKKALEAISRERGSFLYGTPTMFVDILNQPDFSSYDISAICGGVIAGS 1260
T+ P FD K +E + + P+++ IL Q +++S + G
Sbjct: 287 STVFAHHLPQFDPKVIIETFFKYPITQCLAAPSVYRMILQQ-NYTSLRFPTLEHCCTGGE 345
Query: 1261 PVPPELIRAIINKMNMKELVVAYGTTEN--SPVTFMNFPEDTMEQKAESVGRVMPHTEAQ 1434
+ PE + + L AYG +E S T M+ K S+G+ +P + Q
Sbjct: 346 ALLPEEQEQWKRQTGVL-LYQAYGQSEAGISCGTLRG-----MKIKPGSMGKAIPPFDIQ 399
Query: 1435 IMNMETRTLAELNTPGELCIR-----GYCVMQGYWGDPQKTDEVIGQDKWYRTGDIAVMD 1599
I++ + + NT G + IR + Y +P+KT EV D +Y TGD A +D
Sbjct: 400 IID-DKGNIQPPNTEGNIGIRIKPTRPIGLFMYYENNPEKTAEVECGD-FYNTGDRATID 457
Query: 1600 EQGFCRIVGRAKDMIIRGGENIYPAELEDFFHTHPXXXXXXXXXXKDNRMGEEICACIRL 1779
E+G+ +GR+ D+I G + PAE+E+ HP D GE + A I L
Sbjct: 458 EEGYFWFLGRSDDVINASGYRVGPAEVENALAEHPAVAESAVVSSPDPVRGEVVKAFIVL 517
Query: 1780 K-------KGEKTTAEEIKAFCKGKISHFKIPRYIVFVTDYPLTVSGKVQKFKLREQ 1929
GE T +E++ K + +K PR + FV++ P T++GK+++ +LR++
Sbjct: 518 NPEFSSRDPGELT--KELQQHVKSVTAPYKYPRKVEFVSELPKTITGKIKRSELRKK 572
>ref|NP_001095422.1| acyl-CoA synthetase medium-chain family member 2A [Bos taurus].
Length = 550
Score = 102 bits (254), Expect = 1e-21
Identities = 124/514 (24%), Positives = 210/514 (40%), Gaps = 8/514 (1%)
Frame = +1
Query: 412 AQLKEQVDKAAAGLLSIGLRKGDRLGMWGPNSYAWVLIQLATAQAGIILVSVNPAYQAPE 591
++L +Q AG GL++GDR+ + P W L+ L +AG++ + +A +
Sbjct: 87 SELSQQTANVFAG--PCGLQRGDRVTVVLPRVPEWWLVILGCMRAGLVFMPGTIQMKAKD 144
Query: 592 LEYALKKVGCKALVFPKQFKTQQYYNILKQICPEVEKAKPGALKSQRLPDLTIVISVDTP 771
+ Y L+ KA+V + I+ + PE K L S++ D + T
Sbjct: 145 ILYRLQVSKAKAIV-----AGDEVAEIVDTVAPECPSLKTKLLVSEKKRDGWL--DFKTL 197
Query: 772 LPGTLFLDDVVAAGNQEQHLAQLRHTQKFLSCHDPINIQFTSGTTGSPKGATLSHYNIVN 951
L V G+QE I FTSGT+G PK A SH ++
Sbjct: 198 LWKASTTHCFVETGSQEAAA-----------------IYFTSGTSGLPKMAEHSHSSLGI 240
Query: 952 NSNM-IGERLQLSQKTAEKSRMVLPTPLYHCLGSVGGTMVS--LMHGVTLILSSPVFDGK 1122
+ M G+ L + S ++ P + ++ G+++ T I P FD
Sbjct: 241 KAKMDAGKWTDL-----QASDIIWPISDTAWIVNILGSLLEPWTSGACTFIHLLPKFDPV 295
Query: 1123 KALEAISRERGSFLYGTPTMFVDILNQPDFSSYDISAICGGVIAGSPVPPELIRAIINKM 1302
L+ +S +++ G P ++ +L Q D SSY + G + P+ + +
Sbjct: 296 IILKVLSSYPINYMVGAPIVYRMLLLQ-DLSSYKFPHLKCCFSGGETLLPDTLEKWKAQT 354
Query: 1303 NMKELVVAYGTTENSPVTFMNFPEDTMEQKAESVGRVMPHTEAQIMNMETRTLAELNTPG 1482
+ +++ YG TE + G V+P + + +
Sbjct: 355 GL-DILEFYGQTETV---------------IDDKGNVLPPGTEGDVGIRVKP-------- 390
Query: 1483 ELCIRGYCVMQGYWGDPQKTDEVIGQDKWYRTGDIAVMDEQGFCRIVGRAKDMIIRGGEN 1662
IR + GY + +KT+ I D W GD A+ D++G+ R +GR D+I G
Sbjct: 391 ---IRPIGIFSGYVDNLEKTEANIRGDFWV-LGDRAIKDQEGYFRFMGRTDDIINSSGYR 446
Query: 1663 IYPAELEDFFHTHPXXXXXXXXXXKDNRMGEEICACI-----RLKKGEKTTAEEIKAFCK 1827
I P+E+E+ HP D GE + A + L + +E++ K
Sbjct: 447 IGPSEVENALMEHPAVVETAVVSSPDPIRGEVVKAFVVLAPHFLSRDPDELTKELQQHVK 506
Query: 1828 GKISHFKIPRYIVFVTDYPLTVSGKVQKFKLREQ 1929
+ +K PR I FV D P T +GK+Q+ KLR++
Sbjct: 507 LVTAPYKYPRKIEFVLDLPKTNTGKIQRSKLRDK 540
>ref|XP_002698032.1| PREDICTED: acyl-coenzyme A synthetase ACSM2, mitochondrial-like [Bos
taurus].
Length = 580
Score = 102 bits (254), Expect = 1e-21
Identities = 127/525 (24%), Positives = 216/525 (41%), Gaps = 12/525 (2%)
Frame = +1
Query: 391 ENIRLTFAQLKEQVDKAAAGLL-SIGLRKGDRLGMWGPNSYAWVLIQLATAQAGIILVSV 567
E +R +F +L K A L + GL++GDR+ + P W L +A + G +L+
Sbjct: 85 EEVRWSFEELGSLSRKFANILTEACGLQRGDRVILLLPRIPEWWLANIACLRTGTVLIPG 144
Query: 568 NPAYQAPELEYALKKVGCKALVFPKQFKTQQYYNILKQICPEVEKAKPGALKSQRLPDLT 747
++ Y L+ K ++ + + P V+ A K + L
Sbjct: 145 TTQMTQKDILYRLQSSKAKCIITNEV------------LAPAVDAV---ASKCENLHSKL 189
Query: 748 IVISVDTPLPGTLFLDDVVAAGNQEQHLAQLRHTQKFLSCHDPINIQFTSGTTGSPKGAT 927
IV +P G L +++ + + +H + I FTSGT+G PK
Sbjct: 190 IVSQ--SPREGWENLKEMMKHASDNHTCVKTKHNEMMA-------IFFTSGTSGYPKMTG 240
Query: 928 LSHYNIVNNSNMIGERLQLSQKTAEKSRMVLPTPLYHCLGSVGGTMVSLMHGVTLILSS- 1104
+H + ++ G R L + T S + G +
Sbjct: 241 HTHSSFGLGLSING-RFWLDLTPLDVMWNTSDTGWAKSAWS--SVFSPWIQGACVFAHYL 297
Query: 1105 PVFDGKKALEAISRERGSFLYGTPTMFVDILNQPDFSSYDISAICGGVIAGSPVPPELIR 1284
P F+ L+ +S+ + PT + +L Q D +SY ++ V AG P+ PE+
Sbjct: 298 PRFEPTSILQTLSKFPITVFCSAPTAY-RMLVQNDKASYKFKSLKHCVSAGEPINPEVTE 356
Query: 1285 AIINKMNMKELVVAYGTTENSPVTFMNFPEDTMEQKAESVGRVMPHTEAQIMNMETRTLA 1464
N+ + ++ YG TE + NF M+ K S+G+ P + +I+++ L
Sbjct: 357 QWRNRTGL-DIYEGYGQTETVLICG-NFKG--MKIKPGSMGKPSPAFDVKILDVNGNVLP 412
Query: 1465 ELNTPGELCIR-----GYCVMQGYWGDPQKTDEVIGQDKWYRTGDIAVMDEQGFCRIVGR 1629
G++ IR + Y +P KT + + +Y TGD MDE G+ V R
Sbjct: 413 P-GKEGDIGIRVRPNRPLGLFTHYIDNPTKTASTL-RGNFYITGDRGYMDEDGYFWFVSR 470
Query: 1630 AKDMIIRGGENIYPAELEDFFHTHPXXXXXXXXXXKDNRMGEEICACIRLKKGEKT---- 1797
A D+I+ G I P E+E HP D GE + A I L K+
Sbjct: 471 ADDIILSSGYRIGPFEVESALIEHPAVAESAVVSSPDPIRGEVVKAFIVLNPDYKSHDQE 530
Query: 1798 -TAEEIKAFCKGKISHFKIPRYIVFVTDYPLTVSGKVQKFKLREQ 1929
+EI+ K + +K PR + F+ + P T+SGK+++ +LR++
Sbjct: 531 QLKKEIQEHVKRNTAPYKYPRKVEFIQELPKTISGKIKRNELRKK 575
>ref|XP_613318.4| PREDICTED: acyl-coenzyme A synthetase ACSM2, mitochondrial-like [Bos
taurus].
Length = 580
Score = 102 bits (254), Expect = 1e-21
Identities = 127/525 (24%), Positives = 216/525 (41%), Gaps = 12/525 (2%)
Frame = +1
Query: 391 ENIRLTFAQLKEQVDKAAAGLL-SIGLRKGDRLGMWGPNSYAWVLIQLATAQAGIILVSV 567
E +R +F +L K A L + GL++GDR+ + P W L +A + G +L+
Sbjct: 85 EEVRWSFEELGSLSRKFANILTEACGLQRGDRVILLLPRIPEWWLANIACLRTGTVLIPG 144
Query: 568 NPAYQAPELEYALKKVGCKALVFPKQFKTQQYYNILKQICPEVEKAKPGALKSQRLPDLT 747
++ Y L+ K ++ + + P V+ A K + L
Sbjct: 145 TTQMTQKDILYRLQSSKAKCIITNEV------------LAPAVDAV---ASKCENLHSKL 189
Query: 748 IVISVDTPLPGTLFLDDVVAAGNQEQHLAQLRHTQKFLSCHDPINIQFTSGTTGSPKGAT 927
IV +P G L +++ + + +H + I FTSGT+G PK
Sbjct: 190 IVSQ--SPREGWENLKEMMKHASDNHTCVKTKHNEMMA-------IFFTSGTSGYPKMTG 240
Query: 928 LSHYNIVNNSNMIGERLQLSQKTAEKSRMVLPTPLYHCLGSVGGTMVSLMHGVTLILSS- 1104
+H + ++ G R L + T S + G +
Sbjct: 241 HTHSSFGLGLSING-RFWLDLTPLDVMWNTSDTGWAKSAWS--SVFSPWIQGACVFAHYL 297
Query: 1105 PVFDGKKALEAISRERGSFLYGTPTMFVDILNQPDFSSYDISAICGGVIAGSPVPPELIR 1284
P F+ L+ +S+ + PT + +L Q D +SY ++ V AG P+ PE+
Sbjct: 298 PRFEPTSILQTLSKFPITVFCSAPTAY-RMLVQNDKASYKFKSLKHCVSAGEPINPEVTE 356
Query: 1285 AIINKMNMKELVVAYGTTENSPVTFMNFPEDTMEQKAESVGRVMPHTEAQIMNMETRTLA 1464
N+ + ++ YG TE + NF M+ K S+G+ P + +I+++ L
Sbjct: 357 QWRNRTGL-DIYEGYGQTETVLICG-NFKG--MKIKPGSMGKPSPAFDVKILDVNGNVLP 412
Query: 1465 ELNTPGELCIR-----GYCVMQGYWGDPQKTDEVIGQDKWYRTGDIAVMDEQGFCRIVGR 1629
G++ IR + Y +P KT + + +Y TGD MDE G+ V R
Sbjct: 413 P-GKEGDIGIRVRPNRPLGLFTHYIDNPTKTASTL-RGNFYITGDRGYMDEDGYFWFVSR 470
Query: 1630 AKDMIIRGGENIYPAELEDFFHTHPXXXXXXXXXXKDNRMGEEICACIRLKKGEKT---- 1797
A D+I+ G I P E+E HP D GE + A I L K+
Sbjct: 471 ADDIILSSGYRIGPFEVESALIEHPAVAESAVVSSPDPIRGEVVKAFIVLNPDYKSHDQE 530
Query: 1798 -TAEEIKAFCKGKISHFKIPRYIVFVTDYPLTVSGKVQKFKLREQ 1929
+EI+ K + +K PR + F+ + P T+SGK+++ +LR++
Sbjct: 531 QLKKEIQEHVKRNTAPYKYPRKVEFIQELPKTISGKIKRNELRKK 575
>ref|NP_777171.1| acetyl-coenzyme A synthetase 2-like, mitochondrial [Bos taurus].
Length = 675
Score = 101 bits (251), Expect = 3e-21
Identities = 131/561 (23%), Positives = 223/561 (39%), Gaps = 30/561 (5%)
Frame = +1
Query: 334 CLDATAQKIPDKEALVVFHEN----IRLTFAQLKEQVDKAAAGLLSIGLRKGDRLGMWGP 501
CLD QK P+ AL+ + +++T+ +L E + A L G+R+GDR+ ++ P
Sbjct: 100 CLDQHVQKSPESIALIWERDEPGTEVKITYRELLETTCRLANTLKRYGVRRGDRVAIYMP 159
Query: 502 NSYAWVLIQLATAQAGIILVSVNPAYQAPELEYALKKVGCKALVFPKQFKTQQYYNILKQ 681
S V LA A+ G I + + L + CK ++ Q LK+
Sbjct: 160 VSPLAVAAMLACARIGAIHNVIFAGFSVGSLAGRINDAQCKVVITFNQGLRGGRVVQLKK 219
Query: 682 ICPEVEKAKPGA---LKSQRLPDLTIVISVDTPLPGTLFLDDVVAAGNQEQHLAQLRHTQ 852
I E K P L + R + + +D L + ++ V A
Sbjct: 220 IVDEAIKVCPSVQHVLVAHRTDNKVHMGHLDVSLEQEMAKEEPVCAPES----------- 268
Query: 853 KFLSCHDPINIQFTSGTTGSPKGATLSHYNIVNNSNMIGERLQLSQKTAEKSRMVLPTPL 1032
+ D + + +TSG+TG PKG + + + + RL + P +
Sbjct: 269 --MGSEDILFLLYTSGSTGKPKGLVHTQAGYLLYAALT-HRLVFDYR---------PGDI 316
Query: 1033 YHCLGSVGG-------TMVSLMHGVTLIL--SSPVF-DGKKALEAISRERGSFLYGTPTM 1182
+ C+ +G L +G T +L S+PV+ D + E + R + + YG PT
Sbjct: 317 FGCVADIGWITGHSYVVYGPLCNGATSVLFESTPVYPDAGRYWETVQRLKINQFYGAPTA 376
Query: 1183 FVDILNQPD--FSSYDISAICGGVIAGSPVPPEL---IRAIINKMNMKELVVAYGTTENS 1347
+ +L D YD S++ G P+ E + ++ LV + TE
Sbjct: 377 YRLLLKFEDSWVKKYDRSSLRTLGSVGEPINHEAWEWLHRVVGDSRCT-LVDTWWQTETG 435
Query: 1348 PVTFMNFP-EDTMEQKAESVGRVMPHTEAQIMNMETRTLAELNTPGELCIRGYC--VMQG 1518
+ P E+ E R + +M+ + L + G LC+ + +
Sbjct: 436 GICISPRPSEEGAEILPCMAMRPLFGIVPVLMDEKGNVLEGGDVSGALCLSQAWPGMART 495
Query: 1519 YWGDPQKTDEVIGQDK--WYRTGDIAVMDEQGFCRIVGRAKDMIIRGGENIYPAELEDFF 1692
+GD Q+ + + +Y TGD A E+G+ I GR D+I G + AE+ED
Sbjct: 496 IYGDHQRFLDAYFETYPGYYFTGDGAYRTEEGYYEITGRMDDVINISGHRLGTAEIEDAM 555
Query: 1693 HTHPXXXXXXXXXXKDNRMGEEICACIRLKK---GEKTTAEEIKAFCKGKISHFKIPRYI 1863
HP + GE A + LK +E+++ KI+ + +P +
Sbjct: 556 ADHPAVPETAVIGYPHDIKGEAAFAFVVLKDDVGDVDVVVKELRSVVADKIAKYAVPDQV 615
Query: 1864 VFVTDYPLTVSGKVQKFKLRE 1926
+ V P T SGKV + LR+
Sbjct: 616 LVVKRLPKTRSGKVMRRLLRK 636
>ref|NP_001030240.1| acyl-CoA synthetase family member 3, mitochondrial precursor [Bos
taurus].
Length = 586
Score = 100 bits (248), Expect = 7e-21
Identities = 101/391 (25%), Positives = 163/391 (41%), Gaps = 41/391 (10%)
Frame = +1
Query: 883 IQFTSGTTGSPKGATLSHYNIVNNSNMIGERLQLSQKTA-EKSRMVLPT-PLYHCLGSVG 1056
I +TSGTTG PKG +H NI + + G L K A K ++L PL+H G V
Sbjct: 200 IIYTSGTTGRPKGVLSTHDNI--RAVVTG----LVHKWAWTKDDVILHVLPLHHVHGVVN 253
Query: 1057 GTMVSLMHGVTLILSSPVFDGKKALEAISRERG---SFLYGTPTMFVDILN-------QP 1206
+ L G T ++ P F + E + PT++ +++ QP
Sbjct: 254 KLLCPLWVGATCVML-PEFSAQLVWEKFLSSEAPQINVFMAVPTIYSKLMDYYDKHFTQP 312
Query: 1207 DFSSYDISAICGG----VIAGSPVPPELIRAIINKMNMKELVVAYGTTE-----NSPVTF 1359
+ + A+C +++GS P + + L+ YG TE ++P+T
Sbjct: 313 HVQDF-VRAVCEEKIRLMVSGSAALPLPVLEKWKGITGHTLLERYGMTEIGMALSNPLTA 371
Query: 1360 MNFPEDTMEQKAESVGRVMPHTEAQIMNMETRTLA----------ELNTP---------G 1482
P SVG +P E +I++ + + E NT G
Sbjct: 372 ARLPG--------SVGTPLPGVEVRIVSENPQKDSSPYLIHAEGSEENTKVTPGFEEKEG 423
Query: 1483 ELCIRGYCVMQGYWGDPQKTDEVIGQDKWYRTGDIAVMDEQGFCRIVGRAK-DMIIRGGE 1659
EL +RG V + YW P++T D W++TGD V + G I GR D+I GG
Sbjct: 424 ELLVRGPSVFREYWDKPEETKAAFTSDGWFKTGDTVVFKD-GCYWIRGRTSVDIIKSGGY 482
Query: 1660 NIYPAELEDFFHTHPXXXXXXXXXXKDNRMGEEICACIRLKKGEKTTAEEIKAFCKGKIS 1839
+ E+E HP D G+ + A + L++G + E+K + +G ++
Sbjct: 483 KVSALEVERLLLAHPSITDVAVIGVPDMTWGQRVTAVVTLQEGHSLSHRELKEWARGVLA 542
Query: 1840 HFKIPRYIVFVTDYPLTVSGKVQKFKLREQM 1932
+ +P ++ V + P GKV K L Q+
Sbjct: 543 PYAVPSELLLVEEIPRNQMGKVNKRDLVRQL 573
>ref|XP_586827.3| PREDICTED: acyl-CoA synthetase medium-chain family member 5 isoform
1, partial [Bos taurus].
Length = 283
Score = 89.4 bits (220), Expect = 1e-17
Identities = 81/263 (30%), Positives = 119/263 (45%), Gaps = 11/263 (4%)
Frame = +1
Query: 1174 PTMFVDILNQPDFSSYDISAICGGVIAGSPVPPELIRAIINKMNMKELVVAYGTTENSPV 1353
PTMF +L Q D + Y ++ V G + P+ +R EL YG +E V
Sbjct: 14 PTMF-RLLVQEDLTRYQFQSLRHCVTGGEALTPD-VREKWKSQTGLELHEGYGQSET--V 69
Query: 1354 TFMNFPEDTMEQKAESVGRVMPHTEAQIMNMETRTLAELNTPGELCIR-----GYCVMQG 1518
P+ M+ K+ S+G+ P + Q+++ E L G + IR +C
Sbjct: 70 VICANPKG-MKIKSGSMGKASPPYDVQVVDEEGNILPP-GEEGNVAIRVRPTRPFCFFTC 127
Query: 1519 YWGDPQKTDEVIGQDKWYRTGDIAVMDEQGFCRIVGRAKDMIIRGGENIYPAELEDFFHT 1698
Y +P+KT D +Y TGD A MD+ G+ +GR D+I I P E+E
Sbjct: 128 YLDNPEKTAASERGD-FYITGDRAHMDKDGYFWFMGRNDDVINSSSYRIGPVEVESALAE 186
Query: 1699 HPXXXXXXXXXXKDNRMGEEICACIRLKKG------EKTTAEEIKAFCKGKISHFKIPRY 1860
HP D GE + A I L EK T +E++ K + +K PR
Sbjct: 187 HPAVLESAVVSSPDPIRGEVVKAFIVLSPAYSSHDPEKLT-QELQEHVKRVTAPYKYPRK 245
Query: 1861 IVFVTDYPLTVSGKVQKFKLREQ 1929
+ FV++ P TVSGK+Q+ KLR Q
Sbjct: 246 MAFVSELPKTVSGKIQRSKLRSQ 268
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 87,293,799
Number of extensions: 2792474
Number of successful extensions: 13445
Number of sequences better than 1.0e-05: 26
Number of HSP's gapped: 13286
Number of HSP's successfully gapped: 30
Length of query: 689
Length of database: 17,681,374
Length adjustment: 109
Effective length of query: 580
Effective length of database: 14,074,782
Effective search space: 8163373560
Effective search space used: 8163373560
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002234
(2067 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_537673.2| PREDICTED: similar to F46E10.1a [Canis familiar... 1018 0.0
Alignment gi|XP_536948.2| PREDICTED: similar to olfactory specific medium... 121 3e-27
Alignment gi|XP_851280.1| PREDICTED: similar to Acetyl-coenzyme A synthet... 112 1e-24
Alignment gi|XP_536949.2| PREDICTED: similar to kidney-specific protein (... 105 1e-22
Alignment gi|XP_533936.2| PREDICTED: similar to bubblegum related protein... 105 2e-22
Alignment gi|XP_851120.1| PREDICTED: similar to SA hypertension-associate... 100 5e-21
Alignment gi|XP_534200.2| PREDICTED: similar to acetyl-CoA synthetase 2-l... 94 5e-19
Alignment gi|XP_857339.1| PREDICTED: similar to acyl-CoA synthetase long-... 90 7e-18
Alignment gi|XP_532845.2| PREDICTED: similar to acyl-CoA synthetase long-... 83 9e-16
Alignment gi|XP_848838.1| PREDICTED: similar to acyl-CoA synthetase long-... 83 9e-16
>ref|XP_537673.2| PREDICTED: similar to F46E10.1a [Canis familiaris].
Length = 652
Score = 1018 bits (2631), Expect = 0.0
Identities = 499/617 (80%), Positives = 553/617 (89%)
Frame = +1
Query: 100 RAMAVYLGMLRVVRLCAGRPEVLGAGGGLSRVWQEARLWGVRPLSSGEVDHTAPLPIGGL 279
RA+A+Y+GMLR+ RLCAG P LGA L+R WQEARL GVRP SSGE DHT LP GGL
Sbjct: 36 RALAIYVGMLRLGRLCAGTPGALGARTVLARGWQEARLQGVRPFSSGEADHTVLLPTGGL 95
Query: 280 SYIQGNTKLRLINKTVGWCLDATAQKIPDKEALVVFHENIRLTFAQLKEQVDKAAAGLLS 459
SYIQG T+ LI+KTVG CL+ATAQ++PD EALV+ ENIR+TFAQL+E+VDKAA+GLLS
Sbjct: 96 SYIQGPTRHSLIHKTVGQCLEATAQRMPDIEALVIPQENIRVTFAQLQEEVDKAASGLLS 155
Query: 460 IGLRKGDRLGMWGPNSYAWVLIQLATAQAGIILVSVNPAYQAPELEYALKKVGCKALVFP 639
IGL KGDRLGMWGPNSYAWVL+QLATA+AGIILVSVNPAYQA ELEYALKKVGCKAL FP
Sbjct: 156 IGLCKGDRLGMWGPNSYAWVLLQLATARAGIILVSVNPAYQAMELEYALKKVGCKALAFP 215
Query: 640 KQFKTQQYYNILKQICPEVEKAKPGALKSQRLPDLTIVISVDTPLPGTLFLDDVVAAGNQ 819
KQFKTQQYYNILKQICPE+EKA+PG+LKSQRLP+LT VISVD PLPGTL LD+VV G++
Sbjct: 216 KQFKTQQYYNILKQICPELEKAQPGSLKSQRLPELTTVISVDDPLPGTLLLDEVVETGSK 275
Query: 820 EQHLAQLRHTQKFLSCHDPINIQFTSGTTGSPKGATLSHYNIVNNSNMIGERLQLSQKTA 999
EQHLAQLR+TQ+FLSCHDPINIQFTSGTTG+PKGATLSHYNIVNNSN+IG+RL++ K
Sbjct: 276 EQHLAQLRYTQQFLSCHDPINIQFTSGTTGNPKGATLSHYNIVNNSNLIGDRLKMHLKPP 335
Query: 1000 EKSRMVLPTPLYHCLGSVGGTMVSLMHGVTLILSSPVFDGKKALEAISRERGSFLYGTPT 1179
E+ RM+LP+PLYHCLGSVGGTMVS+M+G TLILSSP F+GKKALEAIS+ERGSFLYGTPT
Sbjct: 336 EEKRMILPSPLYHCLGSVGGTMVSVMYGTTLILSSPTFNGKKALEAISKERGSFLYGTPT 395
Query: 1180 MFVDILNQPDFSSYDISAICGGVIAGSPVPPELIRAIINKMNMKELVVAYGTTENSPVTF 1359
MFVDILNQPDFSSYDIS I GGVIAGSP PPELIR II+K+NMK+LVVAYGTTENSPVTF
Sbjct: 396 MFVDILNQPDFSSYDISTIRGGVIAGSPAPPELIRTIIDKLNMKDLVVAYGTTENSPVTF 455
Query: 1360 MNFPEDTMEQKAESVGRVMPHTEAQIMNMETRTLAELNTPGELCIRGYCVMQGYWGDPQK 1539
MNF EDT+EQKAE+VGR++PHTEAQI+NM+T L ELNTPGEL IRGYCVM GYWG+P+K
Sbjct: 456 MNFEEDTVEQKAETVGRILPHTEAQIVNMKTGNLVELNTPGELFIRGYCVMLGYWGEPEK 515
Query: 1540 TDEVIGQDKWYRTGDIAVMDEQGFCRIVGRAKDMIIRGGENIYPAELEDFFHTHPXXXXX 1719
T E IG DKWYRTGDIA +D+QGFC+IVGR+KDMIIRGGENIYPAELEDFFH HP
Sbjct: 516 TKEAIGPDKWYRTGDIAAIDKQGFCKIVGRSKDMIIRGGENIYPAELEDFFHKHPQVLEV 575
Query: 1720 XXXXXKDNRMGEEICACIRLKKGEKTTAEEIKAFCKGKISHFKIPRYIVFVTDYPLTVSG 1899
KD RMGEEICACIRLKKGEKTT EEIKAFCKGKISHFKIPRYIVFVTDYPLTVSG
Sbjct: 576 QVVGVKDARMGEEICACIRLKKGEKTTEEEIKAFCKGKISHFKIPRYIVFVTDYPLTVSG 635
Query: 1900 KVQKFKLREQMEQRLNL 1950
K+QKFKLREQMEQ LNL
Sbjct: 636 KIQKFKLREQMEQHLNL 652
>ref|XP_536948.2| PREDICTED: similar to olfactory specific medium-chain acyl CoA
synthetase [Canis familiaris].
Length = 583
Score = 121 bits (303), Expect = 3e-27
Identities = 130/524 (24%), Positives = 221/524 (42%), Gaps = 12/524 (2%)
Frame = +1
Query: 391 ENIRLTFAQLKEQVDKAAAGLLS-IGLRKGDRLGMWGPNSYAWVLIQLATAQAGIILVSV 567
+ ++ +F +L KAA L GL++GDR+ + P W L+ +A + G++ +
Sbjct: 88 DEVKWSFEELGSFSRKAANVLTKPCGLKRGDRVAVILPRIPEWWLVNVACMRTGLVFMPG 147
Query: 568 NPAYQAPELEYALKKVGCKALVFPKQFKTQQYYNILKQICPEVEKAKPGALKSQRLPDLT 747
A ++ Y L+ K +V ++ ++ I E K L S D
Sbjct: 148 TTQLTAKDILYRLQASKAKCVVV-----SEDVVPAVESIMSECPNLKTKLLVSSHSQD-- 200
Query: 748 IVISVDTPLPGTLFLDDVVAAGNQEQHLAQLRHTQKFLSCHDPINIQFTSGTTGSPKGAT 927
G L ++ + + E + + +P+ I FTSGTTGSPK A
Sbjct: 201 ----------GWLNFQELFQSASSEHNCVET-------GSQEPMAIYFTSGTTGSPKMAL 243
Query: 928 LSHYNIVNNSNMIGERLQLSQKTAEKSRMVLPTPLYHCLGSVGGTMVSLMHGVTLILSSP 1107
S ++ + G R L+ K+++ V T ++G S + G + +
Sbjct: 244 HSQSSLGIGYTICG-RYWLNLKSSDIIWNVSDTGWIKA--AIGSVFSSWLQGACVFVHRM 300
Query: 1108 V-FDGKKALEAISRERGSFLYGTPTMFVDILNQPDFSSYDISAICGGVIAGSPVPPELIR 1284
D L+ ++ + L PT++ +L Q D Y + + G P+ PE++
Sbjct: 301 AQLDTDALLDTLTTYPITTLCAAPTVY-RMLVQKDLKRYKFKKLQHCLTGGEPLNPEVLE 359
Query: 1285 AIINKMNMKELVVAYGTTENSPVTFMNFPEDTMEQKAESVGRVMPHTEAQIMNMETRTLA 1464
+ + EL YG TE V + + E K S+G+ + + QI++ E +
Sbjct: 360 QWKVQTGL-ELYEGYGQTE---VGIICANQKGQEIKPGSMGKGVLPYDVQIID-ENGNVL 414
Query: 1465 ELNTPGELCIR-----GYCVMQGYWGDPQKTDEVIGQDKWYRTGDIAVMDEQGFCRIVGR 1629
GE+ +R +C Y +P+KT I D +Y TGD +MD G+ V R
Sbjct: 415 PPGKEGEIALRLKSTRPFCFFSEYVDNPEKTAATIRGD-FYVTGDRGIMDSDGYFWFVSR 473
Query: 1630 AKDMIIRGGENIYPAELEDFFHTHPXXXXXXXXXXKDNRMGEEICACIRLKKGEKTT--- 1800
A D+II G I P E+E HP D GE + A + L K++
Sbjct: 474 ADDVIISSGYRIGPFEVESALIEHPAVVESAVVSSPDPIRGEVVKAFVVLSAPFKSSNPE 533
Query: 1801 --AEEIKAFCKGKISHFKIPRYIVFVTDYPLTVSGKVQKFKLRE 1926
E++ K + +K PR + FV + P TV+GK+++ LR+
Sbjct: 534 KLTLELQDHVKKTTAPYKYPRKVEFVPELPKTVTGKIKRHVLRD 577
>ref|XP_851280.1| PREDICTED: similar to Acetyl-coenzyme A synthetase (Acetate--CoA
ligase) (Acyl-activating enzyme) (Acetyl-CoA synthetase)
(ACS) (AceCS) [Canis familiaris].
Length = 616
Score = 112 bits (280), Expect = 1e-24
Identities = 125/525 (23%), Positives = 221/525 (42%), Gaps = 12/525 (2%)
Frame = +1
Query: 391 ENIRLTFAQLKEQVDKAAAGLLSI-GLRKGDRLGMWGPNSYAWVLIQLATAQAGIILVSV 567
E I+ +F +L +Q KAA L + GL+ GDR+ + P W L+ +A + G +++
Sbjct: 114 EEIKWSFEELGKQSRKAANVLQGMCGLQPGDRIMLVLPRLPEWWLVSVACIRTGAVMIPG 173
Query: 568 NPAYQAPELEYALKKVGCKALVFPKQFKTQQYYNILKQICPEVEKAKPGALKSQRLPDLT 747
+L+Y L+ K+++ + + + CP ++
Sbjct: 174 VSQLTEKDLKYRLQASRAKSIITSDSLAPR--VDAISADCPSLQSK-------------- 217
Query: 748 IVISVDTPLPGTLFLDDVVAAGNQEQHLAQLRHTQKFLSCHDPINIQFTSGTTGSPKGAT 927
++ ++ PG + +++ + E + + + +P+ I FTSGTTG+PK
Sbjct: 218 -LLVSNSSRPGWMNFRELLREASTEHNCVRTKS-------QNPMAIYFTSGTTGAPK--M 267
Query: 928 LSHYNIVNNSNMIGERLQLSQKTAEKSRMVLPTPLYHCLGSVGGTMVSLMHGVTLILSS- 1104
+ H + Q T KS + T + + + +G + +
Sbjct: 268 VEHSQASYGLGFVASGRQWVDLT--KSDIFWNTSDTGWVKAAWTLFSAWSNGSCIFVHEL 325
Query: 1105 PVFDGKKALEAISRERGSFLYGTPTMFVDILNQPDFSSYDISAICGGVIAGSPVPPELIR 1284
P D K L +SR + PT+F +L Q D + Y ++ V G + P++
Sbjct: 326 PRVDVKVILNTLSRFPITTFCCVPTIF-RLLVQEDLTRYQFQSLRHCVTGGEALNPDVRE 384
Query: 1285 AIINKMNMKELVVAYGTTENSPVTFMNFPEDTMEQKAESVGRVMPHTEAQIMNMETRTLA 1464
+++ + EL YG +E + N M+ KA S+G+ P + Q+++ E L
Sbjct: 385 KWKSQVGL-ELHEGYGQSETVLIC-ANLKG--MKIKAGSMGKAFPPYDVQVVDDEGNILP 440
Query: 1465 ELNTPGELCIR-----GYCVMQGYWGDPQKTDEVIGQDKWYRTGDIAVMDEQGFCRIVGR 1629
G + +R +C Y +P+KT D +Y TGD A D+ G+ GR
Sbjct: 441 P-GEQGNIAVRVKPTQPFCFFSCYLDNPEKTKATERGD-FYITGDQAHKDKDGYFWFTGR 498
Query: 1630 AKDMIIRGGENIYPAELEDFFHTHPXXXXXXXXXXKDNRMGEEICACIRL-----KKGEK 1794
D+I I P E+E+ HP D GE + A I L + K
Sbjct: 499 NDDVINSSSYRIGPVEVENALAEHPAVLEAAVVSSPDPIRGEVVKAFIVLSPAYSSQDPK 558
Query: 1795 TTAEEIKAFCKGKISHFKIPRYIVFVTDYPLTVSGKVQKFKLREQ 1929
+E++ K + + +K PR + FV++ P T SGK+Q+ LR Q
Sbjct: 559 KLTQELQEHVKRETAPYKYPRKMAFVSELPKTTSGKIQRNILRRQ 603
>ref|XP_536949.2| PREDICTED: similar to kidney-specific protein (KS) [Canis
familiaris].
Length = 616
Score = 105 bits (263), Expect = 1e-22
Identities = 130/530 (24%), Positives = 219/530 (41%), Gaps = 23/530 (4%)
Frame = +1
Query: 409 FAQLKEQVDKAAAGLLS--IGLRKGDRLGMWGPNSYAWVLIQLATAQAGIILVSVNPAYQ 582
F+QL E + + AA +LS L++GDR+ M P W L+ L +AG++ + +
Sbjct: 121 FSQLSE-LSQQAANVLSGACSLQRGDRVMMVLPRVPEWWLVTLGCMRAGLVFIPGTIQMR 179
Query: 583 APELEYALKKVGCKALVFPKQFKTQQYYNILKQICPEVEKAKPGALKSQRLPDLTIVISV 762
++ Y L+ +A+V + Q + + CP + K L S++ D +
Sbjct: 180 TKDILYRLQVSKARAIVAGDE--VAQLVDTIASDCPSL---KTKLLVSEKSRDGWL--DF 232
Query: 763 DTPLPGTLFLDDVVAAGNQEQHLAQLRHTQKFLSCHDPINIQFTSGTTGSPKGATLSHYN 942
T L V G+QE I FTSGTTG PK A SH +
Sbjct: 233 RTLLREASTTHCCVETGSQEAAA-----------------IYFTSGTTGLPKMAEHSHSS 275
Query: 943 IVNNSNM-IGERLQLSQKTAEKSRMVLPTPLYHCLGSVGGTMVSL--------MHGVTLI 1095
+ + M IG + P+ + + + L + + I
Sbjct: 276 LGLKAKMDIGVWTDMQ-----------PSDIIWVISDTAWILNILASFLEPWAVGACSFI 324
Query: 1096 LSSPVFDGKKALEAISRERGSFLYGTPTMFVDILNQPDFSSYDISAICGGVIAGSPVPPE 1275
P FD L+ +S + G P ++ +L Q DF SY + G + P+
Sbjct: 325 HLLPKFDPVIILKVLSSYPINNFVGAPIIY-QMLIQQDFPSYKFPHLQNCYSGGDALLPD 383
Query: 1276 LIR--AIINKMNMKELVVAYGTTENSPVTFMNFPEDTMEQKAESVGRVMPHTEAQIMNME 1449
++ ++++EL YG TE ++ M+ K +G +PH + Q+++ +
Sbjct: 384 ILENWRARTGLDIREL---YGQTETGITCRVS---KNMKIKPGYLGTAIPHYDVQVLDDK 437
Query: 1450 TRTLAELNTPGELCIR-----GYCVMQGYWGDPQKTDEVIGQDKWYRTGDIAVMDEQGFC 1614
L G++ IR + GY P+KT I D W GD A+ D+ G+
Sbjct: 438 GNVLPP-GIEGDIGIRVKPIRPIGIFSGYVDSPEKTAASIRGDFWI-LGDRAIKDQDGYF 495
Query: 1615 RIVGRAKDMIIRGGENIYPAELEDFFHTHPXXXXXXXXXXKDNRMGEEICACIRLK---- 1782
R +GR+ D+I G I P+E+E+ HP D E + A + L
Sbjct: 496 RFIGRSDDIINSSGYRIGPSEVENALMEHPAVIETAVISSPDPVRKEVVKAFVVLAPQFL 555
Query: 1783 -KGEKTTAEEIKAFCKGKISHFKIPRYIVFVTDYPLTVSGKVQKFKLREQ 1929
+E++ K + +K PR + FV++ P T +GK+Q+ KLR++
Sbjct: 556 FHNLDQLTKELQQHVKSVTAPYKYPRKVEFVSELPKTNTGKIQRKKLRDK 605
>ref|XP_533936.2| PREDICTED: similar to bubblegum related protein [Canis familiaris].
Length = 689
Score = 105 bits (261), Expect = 2e-22
Identities = 109/480 (22%), Positives = 182/480 (37%), Gaps = 52/480 (10%)
Frame = +1
Query: 403 LTFAQLKEQVDKAAAGLLSIGLRKGDRLGMWGPNSYAWVLIQLATAQAGIILVSVNPAYQ 582
L F Q E KAA L+ +GL++ +G+ G NS W++ L AG + V +
Sbjct: 94 LNFNQYYEACRKAARALIKLGLQRFHGVGILGFNSVEWLIASLGAILAGGLCVGIYATNS 153
Query: 583 APELEYALKKVGCKALVFPKQFKTQQYYNILKQICPEVEKAKPGALKSQRLPDLTIVISV 762
A +Y + L+ + Q+ +I P+ A+ +LP V
Sbjct: 154 ADACQYVITNAKVNVLLVENDLQLQKILSI-----PQSRMETLKAIIQYKLP-------V 201
Query: 763 DTPLPGTLFLDDVVAAGNQ--EQHLAQLRHTQKFLSCHDPINIQFTSGTTGSPKGATLSH 936
+D + GN + L Q+ +Q+ C I +TSGT G+PKG LSH
Sbjct: 202 KESNNNLYSWNDFMELGNSIPDSQLDQIIESQRANQC---AVIIYTSGTLGNPKGVMLSH 258
Query: 937 YNIVNNSNMIGERLQLSQKTAEKSRMVLPTPLYHCLGSVGGTMVSLMHGVTLILSSPVFD 1116
NI + + + LS ++ +V PL H + + + G + + P
Sbjct: 259 DNITWTAGAVAKNCSLSNAAEKQEVVVSYLPLSHVAAQMMDVWIPMKIGAFIYFAQPDAL 318
Query: 1117 GKKALEAISRERGSFLYGTPTMFVDILNQPDFSSYDISAICGGVIAGSPVPPELIRAIIN 1296
+ + + + G P ++ + + S S++ V + R I
Sbjct: 319 TGTLINTLLEVKPTAFLGVPRIWEKMQEKIKESGAKCSSLRKKVFSWG-------RIIGL 371
Query: 1297 KMNMKELVVAYGTTENSPVT------------------------------------FMNF 1368
K+N K + + TT + V ++
Sbjct: 372 KVNTKRMFGVHDTTMSYRVAKALVFSKVRNALGLDQCQIPISGAAPLNPETSEFFLSLDI 431
Query: 1369 PEDTMEQKAESVGRVMPHTEAQIMNMETRTLAEL-------------NTPGELCIRGYCV 1509
P M +ES G PHT + N + + ++ + GE+CI G V
Sbjct: 432 PIGEMYGMSESTG---PHTTSSRNNYKIHSCGKIMSGCKNMLYQQSKDGTGEICIWGRHV 488
Query: 1510 MQGYWGDPQKTDEVIGQDKWYRTGDIAVMDEQGFCRIVGRAKDMII-RGGENIYPAELED 1686
GY T E I ++ W TGD+ +D GF I GR K+++I GGEN+ P +E+
Sbjct: 489 FMGYLEMEDATMEAIDEEGWLHTGDLGRVDSHGFLYITGRIKEILITAGGENVAPVPIEN 548
>ref|XP_851120.1| PREDICTED: similar to SA hypertension-associated homolog isoform 1
[Canis familiaris].
Length = 580
Score = 100 bits (249), Expect = 5e-21
Identities = 121/526 (23%), Positives = 216/526 (41%), Gaps = 13/526 (2%)
Frame = +1
Query: 391 ENIRLTFAQLKEQVDKAAAGLL-SIGLRKGDRLGMWGPNSYAWVLIQLATAQAGIILVSV 567
E +R +F +L K A L + L++GDR+ + P W L +A + G +L+
Sbjct: 85 EEVRWSFEELGSLSRKFANILTEACALQRGDRVIVILPKIPEWWLANVACLRTGTVLIPG 144
Query: 568 NPAYQAPELEYALKKVGCKALVFPKQFKTQQYYNILKQICPEVEKAKPGALKSQRLPDLT 747
++ Y L+ K ++ + + + + + E + SQ+
Sbjct: 145 TTQLTQKDILYRLQSSKAKCII-----TNEVLASAVDAVASKCENLHSKLIVSQK----- 194
Query: 748 IVISVDTPLPGTLFLDDVVAAGNQEQHLAQLRHTQKFLSCHDPINIQFTSGTTGSPKGAT 927
P G L +++ + +H + I FTSGT+GSPK
Sbjct: 195 -------PKDGWGNLKEMIKHASDNHTCVNTKHDEMMA-------IYFTSGTSGSPKMTG 240
Query: 928 LSHYNIVNNSNMIGERLQLSQKTAEKSRMVLPTPLYHCLGSVGGTMVS--LMHGVTLILS 1101
SH + ++ G R L ++ ++ T S ++ S +
Sbjct: 241 HSHSSFGLGLSVNG-RFWLDLTPSD---VIWNTSDTGWAKSAWSSVFSPWIQGACVFAHY 296
Query: 1102 SPVFDGKKALEAISRERGSFLYGTPTMFVDILNQPDFSSYDISAICGGVIAGSPVPPELI 1281
P F+ + +S+ + PT + +L Q D +SY ++ V AG P+ PE+
Sbjct: 297 LPRFEPTSIFQTLSKFPITVFCSAPTAY-RMLIQSDMTSYKFKSLKHCVSAGEPINPEVT 355
Query: 1282 RAIINKMNMKELVVAYGTTENSPVTFMNFPEDTMEQKAESVGRVMPHTEAQIMNMETRTL 1461
+ + ++ YG TE + NF M+ K S+G+ P + +I+++ L
Sbjct: 356 EQWRKRTGL-DIYEGYGQTETVLICG-NFKG--MKIKPGSMGKPSPAFDVKILDVNGNVL 411
Query: 1462 AELNTPGELCI-----RGYCVMQGYWGDPQKTDEVIGQDKWYRTGDIAVMDEQGFCRIVG 1626
G++ I R + + Y +P KT + + +Y TGD MDE G+ V
Sbjct: 412 PP-GQEGDIGIQVLPNRPFGLFTHYVDNPTKTASTL-RGNFYITGDRGYMDEDGYFWFVA 469
Query: 1627 RAKDMIIRGGENIYPAELEDFFHTHPXXXXXXXXXXKDNRMGEEICACIRLKKGEKT--- 1797
R+ D+I+ G I P E+E HP D GE + A I L K+
Sbjct: 470 RSDDIILSSGYRIGPFEVESALTEHPAVAEAAVVSSPDPIRGEVVKAFIVLTPDYKSCDQ 529
Query: 1798 --TAEEIKAFCKGKISHFKIPRYIVFVTDYPLTVSGKVQKFKLREQ 1929
+EI+ K + +K PR + F+ + P T+SGK+++ +LR++
Sbjct: 530 EQLKKEIQEHVKKTTAPYKYPRKVEFIQELPKTISGKIKRNELRKK 575
>ref|XP_534200.2| PREDICTED: similar to acetyl-CoA synthetase 2-like [Canis
familiaris].
Length = 628
Score = 94.0 bits (232), Expect = 5e-19
Identities = 131/535 (24%), Positives = 206/535 (38%), Gaps = 31/535 (5%)
Frame = +1
Query: 415 QLKEQVDKAAAGLLSIGLRKGDRLGMWGPNSYAWVLIQLATAQAGIILVSVNPAYQAPEL 594
+L E + A L G+R+GDR+ ++ P S V LA A+ G + V + A L
Sbjct: 85 ELLETTCRLANTLKRHGIRRGDRVAIYMPVSPLAVAAMLACARIGAVHTVVFAGFSAESL 144
Query: 595 EYALKKVGCKALVFPKQFKTQQYYNILKQICPEVEKAKPGA---LKSQRLPDLTIVISVD 765
+ CK ++ Q LK+I E K P L + R + + +D
Sbjct: 145 AGRINDAKCKVVITFNQGLRGGRVVELKKIVDEAVKHCPTVQHVLVAHRTDNKVHMGHLD 204
Query: 766 TPLPGTLFLDDVVAAGNQEQHLAQLRHTQKFLSCHDPINIQFTSGTTGSPKGATLSHYNI 945
PL + +D V A + D + + +TSG+TG+PKG +
Sbjct: 205 IPLEQEMAKEDPVCAPES-------------MGSEDMLFLLYTSGSTGTPKGLVHTQAGY 251
Query: 946 VNNSNMIGERLQLSQKTAEKSRMVLPTPLYHCLGSVGG-------TMVSLMHGVTLIL-- 1098
+ + L+ K R P ++ C+ +G L +G T +L
Sbjct: 252 LLYA-------ALTHKLVFDYR---PGDVFGCVADIGWITGHSYVVYGPLCNGATSVLFE 301
Query: 1099 SSPVF-DGKKALEAISRERGSFLYGTPTMFVDILNQPD--FSSYDISAICGGVIAGSPVP 1269
S+PV+ D + E + R + + YG PT +L D YD S++ G P+
Sbjct: 302 STPVYPDAGRYWEMVQRLKINQFYGAPTAVRLLLKYGDSWVKKYDRSSLRTLGSVGEPIN 361
Query: 1270 PEL---IRAIINKMNMKELVVAYGTTENSPVTFMNFP-EDTMEQKAESVGRVMPHTEAQI 1437
E + ++ LV + TE + P E+ E R +
Sbjct: 362 FEAWEWLHKVVGDGRCT-LVDTWWQTETGGICIAPRPSEEGAEILPGMAMRPFFGIVPVL 420
Query: 1438 MNMETRTLAELNTPGELCIRGYCVMQGYWGDPQKTDEVIGQDKW---------YRTGDIA 1590
M+ + + + N G LC+ W +T +D W Y TGD A
Sbjct: 421 MDEKGKVVEGGNISGALCL------SQAWPGMARTIYGDHRDSWRPTSALPSHYFTGDGA 474
Query: 1591 VMDEQGFCRIVGRAKDMIIRGGENIYPAELEDFFHTHPXXXXXXXXXXKDNRMGEEICAC 1770
E G+ +I GR D+I G + AE+ED HP + GE A
Sbjct: 475 YRTEDGYYQITGRMDDVINISGHRLGTAEIEDAMANHPAVPETAVIGYPHDIKGEGAFAF 534
Query: 1771 IRLKKGEKTT---AEEIKAFCKGKISHFKIPRYIVFVTDYPLTVSGKVQKFKLRE 1926
I LK T +E+K+ KI+ + +P I+ V P T SGKV + LR+
Sbjct: 535 IVLKDNTGDTDAVVKELKSAVATKIAKYAVPDQILVVKRLPKTRSGKVMRRLLRK 589
>ref|XP_857339.1| PREDICTED: similar to acyl-CoA synthetase long-chain family member 1
isoform 4 [Canis familiaris].
Length = 666
Score = 90.1 bits (222), Expect = 7e-18
Identities = 110/457 (24%), Positives = 189/457 (41%), Gaps = 27/457 (5%)
Frame = +1
Query: 403 LTFAQLKEQVDKAAAGLLSIGLRKGDR--LGMWGPNSYAWVLIQLATAQAGIILVSVNPA 576
L++ Q+ E + + L+ G + +G++ N WV+I+ +++V +
Sbjct: 121 LSYKQVAEIAECVGSALIQKGFKTAPDQFIGIFAQNRPEWVIIEQGCFAYSMVVVPLYDT 180
Query: 577 YQAPELEYALKKVGCKALVFPKQFKTQQYYNILKQICPEVEKAKPGALKSQRLPDLTIVI 756
+ Y + K + K K N+L ++++ +P L I++
Sbjct: 181 LGTEAITYIINKAELSLIFVDKPDKA----NLLLD-----------GVENKLIPGLKIIV 225
Query: 757 SVDTPLPGTLFLD-------DVVAAGNQEQHLAQLRHTQKFLSCHDPINIQFTSGTTGSP 915
+D+ G L+ ++++ E R K + D I FTSGTTG+P
Sbjct: 226 LMDSY--GIDLLERGKRCGVEIISMKAMEDLGRANRQRPKPPAPEDLAVICFTSGTTGNP 283
Query: 916 KGATLSHYNIVNNSNMIGERLQ--LSQKTAEKSRMVLPTP-----LYHCLGSVGGTMVSL 1074
KGA ++H NIV++ + + + L+ ++ LP L C+ G +
Sbjct: 284 KGAMITHRNIVSDCSAFVKVTEKVLALNASDTHISFLPLAHMYEQLLQCVMLCHGAKIGF 343
Query: 1075 MHGVTLILSSPVFDGKKALEAISRERGSFLYGTPTMFVDILNQP---------DFSSYDI 1227
G +L D KAL+ L MF I Q DF+S
Sbjct: 344 FQGDIRLL----MDDLKALQPTIFPVVPRLLNR--MFDRIFGQANTTLKRWLLDFASKRK 397
Query: 1228 SA-ICGGVIAGSPVPPELIRAIINKMNMKELVVAYGTTENSPVTFMNFPEDTMEQKAESV 1404
A + G+I + + +LI +K+ E YG TE + + P D A V
Sbjct: 398 EAELRSGIIRNNSLWDKLI---FHKIQFYE---GYGQTECTAGCCLTVPGDWT---AGHV 448
Query: 1405 GRVMPHTEAQIMNMETRTLAELNTPGELCIRGYCVMQGYWGDPQKTDEVIGQDKWYRTGD 1584
G MP +++++E GE+C++G V +GY DP KT EV+ +D W TGD
Sbjct: 449 GSPMPCNLIKLVDVEEMNYLAAKGEGEVCVKGPNVFKGYLKDPAKTAEVLDKDGWLHTGD 508
Query: 1585 IAVMDEQGFCRIVGRAKDMI-IRGGENIYPAELEDFF 1692
I G +I+ R K + + GE I P ++E+ +
Sbjct: 509 IGKWLPNGTLKIIDRKKHIFKLAQGEYIAPEKIENIY 545
>ref|XP_532845.2| PREDICTED: similar to acyl-CoA synthetase long-chain family member 1
isoform 1 [Canis familiaris].
Length = 658
Score = 83.2 bits (204), Expect = 9e-16
Identities = 98/446 (21%), Positives = 182/446 (40%), Gaps = 16/446 (3%)
Frame = +1
Query: 403 LTFAQLKEQVDKAAAGLLSIGLRKGDR--LGMWGPNSYAWVLIQLATAQAGIILVSVNPA 576
L++ Q+ E + + L+ G + +G++ N WV+I+ +++V +
Sbjct: 121 LSYKQVAEIAECVGSALIQKGFKTAPDQFIGIFAQNRPEWVIIEQGCFAYSMVVVPLYDT 180
Query: 577 YQAPELEYALKKVGCKALVFPKQFKTQQYYNILKQICPEVEKAKPGALKSQRLPDLTIVI 756
+ Y + K + K K N+L ++++ +P L I++
Sbjct: 181 LGTEAITYIINKAELSLIFVDKPDKA----NLLLD-----------GVENKLIPGLKIIV 225
Query: 757 SVDTPLPGTLFLD-------DVVAAGNQEQHLAQLRHTQKFLSCHDPINIQFTSGTTGSP 915
+D+ G L+ ++++ E R K + D I FTSGTTG+P
Sbjct: 226 LMDSY--GIDLLERGKRCGVEIISMKAMEDLGRANRQRPKPPAPEDLAVICFTSGTTGNP 283
Query: 916 KGATLSHYNIVNNSNMIGERLQLSQKTAEKSRMVLPTPLYHCLGSVGGTMVSLMHG-VTL 1092
KGA ++H NIV++ + + + + L ++ + + M + G
Sbjct: 284 KGAMITHRNIVSDCSAFVKVTEGDIRLLMDDLKALQPTIFPVVPRLLNRMFDRIFGQANT 343
Query: 1093 ILSSPVFD-GKKALEAISRERGSFLYGTPTMFVDILNQPDFSSYDISAICGG----VIAG 1257
L + D K EA E S + +++ ++ + I + GG +I G
Sbjct: 344 TLKRWLLDFASKRKEA---ELRSGIIRNNSLWDKLI------FHKIQSSLGGKVRLMITG 394
Query: 1258 SPVPPELIRAIINKMNMKELVVAYGTTENSPVTFMNFPEDTMEQKAESVGRVMPHTEAQI 1437
+ + + + YG TE + + P D A VG MP ++
Sbjct: 395 AAPVSATVLTFLRAALGCQFYEGYGQTECTAGCCLTVPGDWT---AGHVGSPMPCNLIKL 451
Query: 1438 MNMETRTLAELNTPGELCIRGYCVMQGYWGDPQKTDEVIGQDKWYRTGDIAVMDEQGFCR 1617
+++E GE+C++G V +GY DP KT EV+ +D W TGDI G +
Sbjct: 452 VDVEEMNYLAAKGEGEVCVKGPNVFKGYLKDPAKTAEVLDKDGWLHTGDIGKWLPNGTLK 511
Query: 1618 IVGRAKDMI-IRGGENIYPAELEDFF 1692
I+ R K + + GE I P ++E+ +
Sbjct: 512 IIDRKKHIFKLAQGEYIAPEKIENIY 537
>ref|XP_848838.1| PREDICTED: similar to acyl-CoA synthetase long-chain family member 1
isoform 2 [Canis familiaris].
Length = 698
Score = 83.2 bits (204), Expect = 9e-16
Identities = 107/483 (22%), Positives = 186/483 (38%), Gaps = 53/483 (10%)
Frame = +1
Query: 403 LTFAQLKEQVDKAAAGLLSIGLRKGDR--LGMWGPNSYAWVLIQLATAQAGIILVSVNPA 576
L++ Q+ E + + L+ G + +G++ N WV+I+ +++V +
Sbjct: 121 LSYKQVAEIAECVGSALIQKGFKTAPDQFIGIFAQNRPEWVIIEQGCFAYSMVVVPLYDT 180
Query: 577 YQAPELEYALKKVGCKALVFPKQFKTQQYYNILKQICPEVEKAKPGALKSQRLPDLTIVI 756
+ Y + K + K K N+L ++++ +P L I++
Sbjct: 181 LGTEAITYIINKAELSLIFVDKPDKA----NLLLD-----------GVENKLIPGLKIIV 225
Query: 757 SVDTPLPGTLFLD-------DVVAAGNQEQHLAQLRHTQKFLSCHDPINIQFTSGTTGSP 915
+D+ G L+ ++++ E R K + D I FTSGTTG+P
Sbjct: 226 LMDSY--GIDLLERGKRCGVEIISMKAMEDLGRANRQRPKPPAPEDLAVICFTSGTTGNP 283
Query: 916 KGATLSHYNIVNNSNMIGERLQLSQKTAEKSRMVLPTPLYH-------CLGSVGGTMVSL 1074
KGA ++H NIV++ + + + + ++ PL H C+ G +
Sbjct: 284 KGAMITHRNIVSDCSAFVKVTENIISPSPDDTLISFLPLAHMFERVVECVMLCHGAKIGF 343
Query: 1075 MHGVTLILSSPVFDGKKALEAISRERGSFLYGTPTMFVDILNQP---------DFSS--- 1218
G +L D KAL+ L MF I Q DF+S
Sbjct: 344 FQGDIRLL----MDDLKALQPTIFPVVPRLLNR--MFDRIFGQANTTLKRWLLDFASKRK 397
Query: 1219 --------------------YDISAICGG----VIAGSPVPPELIRAIINKMNMKELVVA 1326
+ I + GG +I G+ + + +
Sbjct: 398 EAELRSGIIRNNSLWDKLIFHKIQSSLGGKVRLMITGAAPVSATVLTFLRAALGCQFYEG 457
Query: 1327 YGTTENSPVTFMNFPEDTMEQKAESVGRVMPHTEAQIMNMETRTLAELNTPGELCIRGYC 1506
YG TE + + P D A VG MP +++++E GE+C++G
Sbjct: 458 YGQTECTAGCCLTVPGDWT---AGHVGSPMPCNLIKLVDVEEMNYLAAKGEGEVCVKGPN 514
Query: 1507 VMQGYWGDPQKTDEVIGQDKWYRTGDIAVMDEQGFCRIVGRAKDMI-IRGGENIYPAELE 1683
V +GY DP KT EV+ +D W TGDI G +I+ R K + + GE I P ++E
Sbjct: 515 VFKGYLKDPAKTAEVLDKDGWLHTGDIGKWLPNGTLKIIDRKKHIFKLAQGEYIAPEKIE 574
Query: 1684 DFF 1692
+ +
Sbjct: 575 NIY 577
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 91,148,016
Number of extensions: 2860248
Number of successful extensions: 13596
Number of sequences better than 1.0e-05: 31
Number of HSP's gapped: 13455
Number of HSP's successfully gapped: 33
Length of query: 689
Length of database: 18,874,504
Length adjustment: 110
Effective length of query: 579
Effective length of database: 15,207,544
Effective search space: 8805167976
Effective search space used: 8805167976
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002234
(2067 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_079425.3| acyl-CoA synthetase family member 2, mitochondr... 1018 0.0
Alignment gi|NP_001073923.1| acyl-coenzyme A synthetase ACSM4, mitochondr... 127 4e-29
Alignment gi|NP_443188.2| acyl-coenzyme A synthetase ACSM1, mitochondrial... 120 5e-27
Alignment gi|NP_060358.2| acyl-coenzyme A synthetase ACSM5, mitochondrial... 117 3e-26
Alignment gi|NP_001010845.1| acyl-coenzyme A synthetase ACSM2A, mitochond... 109 1e-23
Alignment gi|NP_001098539.1| acyl-coenzyme A synthetase ACSM2B, mitochond... 108 2e-23
Alignment gi|NP_872423.3| acyl-coenzyme A synthetase ACSM2B, mitochondria... 108 2e-23
Alignment gi|NP_115890.2| acetyl-coenzyme A synthetase 2-like, mitochondr... 104 4e-22
Alignment gi|NP_005613.2| acyl-coenzyme A synthetase ACSM3, mitochondrial... 99 2e-20
Alignment gi|NP_001120686.1| acyl-CoA synthetase family member 3, mitocho... 99 2e-20
>ref|NP_079425.3| acyl-CoA synthetase family member 2, mitochondrial precursor [Homo
sapiens].
Length = 615
Score = 1018 bits (2633), Expect = 0.0
Identities = 496/615 (80%), Positives = 551/615 (89%)
Frame = +1
Query: 106 MAVYLGMLRVVRLCAGRPEVLGAGGGLSRVWQEARLWGVRPLSSGEVDHTAPLPIGGLSY 285
MAVY+GMLR+ RLCAG VLGA LSR WQEARL GVR LSS EVD PIGGLSY
Sbjct: 1 MAVYVGMLRLGRLCAGSSGVLGARAALSRSWQEARLQGVRFLSSREVDRMVSTPIGGLSY 60
Query: 286 IQGNTKLRLINKTVGWCLDATAQKIPDKEALVVFHENIRLTFAQLKEQVDKAAAGLLSIG 465
+QG TK L +KTVG CL+ TAQ++P++EALVV HE++RLTFAQLKE+VDKAA+GLLSIG
Sbjct: 61 VQGCTKKHLNSKTVGQCLETTAQRVPEREALVVLHEDVRLTFAQLKEEVDKAASGLLSIG 120
Query: 466 LRKGDRLGMWGPNSYAWVLIQLATAQAGIILVSVNPAYQAPELEYALKKVGCKALVFPKQ 645
L KGDRLGMWGPNSYAWVL+QLATAQAGIILVSVNPAYQA ELEY LKKVGCKALVFPKQ
Sbjct: 121 LCKGDRLGMWGPNSYAWVLMQLATAQAGIILVSVNPAYQAMELEYVLKKVGCKALVFPKQ 180
Query: 646 FKTQQYYNILKQICPEVEKAKPGALKSQRLPDLTIVISVDTPLPGTLFLDDVVAAGNQEQ 825
FKTQQYYN+LKQICPEVE A+PGALKSQRLPDLT VISVD PLPGTL LD+VVAAG+ Q
Sbjct: 181 FKTQQYYNVLKQICPEVENAQPGALKSQRLPDLTTVISVDAPLPGTLLLDEVVAAGSTRQ 240
Query: 826 HLAQLRHTQKFLSCHDPINIQFTSGTTGSPKGATLSHYNIVNNSNMIGERLQLSQKTAEK 1005
HL QL++ Q+FLSCHDPINIQFTSGTTGSPKGATLSHYNIVNNSN++GERL+L +KT E+
Sbjct: 241 HLDQLQYNQQFLSCHDPINIQFTSGTTGSPKGATLSHYNIVNNSNILGERLKLHEKTPEQ 300
Query: 1006 SRMVLPTPLYHCLGSVGGTMVSLMHGVTLILSSPVFDGKKALEAISRERGSFLYGTPTMF 1185
RM+LP PLYHCLGSV GTM+ LM+G TLIL+SP+F+GKKALEAISRERG+FLYGTPTMF
Sbjct: 301 LRMILPNPLYHCLGSVAGTMMCLMYGATLILASPIFNGKKALEAISRERGTFLYGTPTMF 360
Query: 1186 VDILNQPDFSSYDISAICGGVIAGSPVPPELIRAIINKMNMKELVVAYGTTENSPVTFMN 1365
VDILNQPDFSSYDIS +CGGVIAGSP PPELIRAIINK+NMK+LVVAYGTTENSPVTF +
Sbjct: 361 VDILNQPDFSSYDISTMCGGVIAGSPAPPELIRAIINKINMKDLVVAYGTTENSPVTFAH 420
Query: 1366 FPEDTMEQKAESVGRVMPHTEAQIMNMETRTLAELNTPGELCIRGYCVMQGYWGDPQKTD 1545
FPEDT+EQKAESVGR+MPHTEA+IMNME TLA+LNTPGELCIRGYCVM GYWG+PQKT+
Sbjct: 421 FPEDTVEQKAESVGRIMPHTEARIMNMEAGTLAKLNTPGELCIRGYCVMLGYWGEPQKTE 480
Query: 1546 EVIGQDKWYRTGDIAVMDEQGFCRIVGRAKDMIIRGGENIYPAELEDFFHTHPXXXXXXX 1725
E + QDKWY TGD+A M+EQGFC+IVGR+KDMIIRGGENIYPAELEDFFHTHP
Sbjct: 481 EAVDQDKWYWTGDVATMNEQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPKVQEVQV 540
Query: 1726 XXXKDNRMGEEICACIRLKKGEKTTAEEIKAFCKGKISHFKIPRYIVFVTDYPLTVSGKV 1905
KD+RMGEEICACIRLK GE+TT EEIKAFCKGKISHFKIP+YIVFVT+YPLT+SGK+
Sbjct: 541 VGVKDDRMGEEICACIRLKDGEETTVEEIKAFCKGKISHFKIPKYIVFVTNYPLTISGKI 600
Query: 1906 QKFKLREQMEQRLNL 1950
QKFKLREQME+ LNL
Sbjct: 601 QKFKLREQMERHLNL 615
>ref|NP_001073923.1| acyl-coenzyme A synthetase ACSM4, mitochondrial precursor [Homo
sapiens].
Length = 580
Score = 127 bits (319), Expect = 4e-29
Identities = 140/527 (26%), Positives = 224/527 (42%), Gaps = 14/527 (2%)
Frame = +1
Query: 391 ENIRLTFAQLKEQVDKAAAGLLS-IGLRKGDRLGMWGPNSYAWVLIQLATAQAGIILVSV 567
+ ++ +F +L KAA L GL++GDRL + P W L+ +A + GII +
Sbjct: 85 DEVKWSFRELGSLSRKAANVLTKPCGLQRGDRLAVILPRIPEWWLVNVACIRTGIIFMPG 144
Query: 568 NPAYQAPELEYALKKVGCKALVFPKQFKTQQYYNILKQICPEVEKAKPGALKSQRLPDLT 747
A ++ Y L+ K +V ++ + P VE PDL
Sbjct: 145 TIQLTAKDILYRLRASKAKCIVASEE------------VAPAVESIV------LECPDLK 186
Query: 748 IVISVDTPL-PGTLFLDDVVAAGNQEQHLAQLRHTQKFLSCHDPINIQFTSGTTGSPKGA 924
+ V G L ++ ++E H+ +P+ I FTSGTTG PK A
Sbjct: 187 TKLLVSPQSWNGWLSFQELFQFASEE-------HSCVETGSQEPMTIYFTSGTTGFPKMA 239
Query: 925 TLSHYNIVNNSNMIGERLQLSQKTAEKSRMVLPTPLYHCLGSVGGTMVSLMHGVTLILSS 1104
S ++ + G R L K+++ + T ++G S + G + +
Sbjct: 240 QHSQSSLGIGFTLCG-RYWLDLKSSDIIWNMSDTGWVKA--AIGSVFSSWLCGACVFVHR 296
Query: 1105 PV-FDGKKALEAISRERGSFLYGTPTMFVDILNQPDFSSYDISAICGGVIAGSPVPPELI 1281
FD L+ ++ + L PT++ +L Q D Y ++ + G P+ PE++
Sbjct: 297 MAQFDTDTFLDTLTTYPITTLCSPPTVY-RMLVQKDLKRYKFKSLRHCLTGGEPLNPEVL 355
Query: 1282 RAIINKMNMKELVVAYGTTENSPVTFMNFPEDTMEQKAESVGRVMPHTEAQIMNMETRTL 1461
+ + EL YG TE V + + E K S+G+ M + QI++ E +
Sbjct: 356 EQWRVQTGL-ELYEGYGQTE---VGMICANQKGQEIKPGSMGKGMLPYDVQIID-ENGNV 410
Query: 1462 AELNTPGELCIR-----GYCVMQGYWGDPQKTDEVIGQDKWYRTGDIAVMDEQGFCRIVG 1626
GE+ +R +C Y +PQKT I D +Y TGD VMD G+ VG
Sbjct: 411 LPPGKEGEIALRLKPTRPFCFFSKYVDNPQKTAATIRGD-FYVTGDRGVMDSDGYFWFVG 469
Query: 1627 RAKDMIIRGGENIYPAELEDFFHTHPXXXXXXXXXXKDNRMGEEICACIRLK------KG 1788
RA D+II G I P E+E HP D GE + A + L
Sbjct: 470 RADDVIISSGYRIGPFEVESALIEHPAVVESAVVSSPDQIRGEVVKAFVVLAAPFKSYNP 529
Query: 1789 EKTTAEEIKAFCKGKISHFKIPRYIVFVTDYPLTVSGKVQKFKLREQ 1929
EK T E++ K + +K PR + FV + P T++GK+++ LR+Q
Sbjct: 530 EKLTL-ELQDHVKKSTAPYKYPRKVEFVQELPKTITGKIKRNVLRDQ 575
>ref|NP_443188.2| acyl-coenzyme A synthetase ACSM1, mitochondrial [Homo sapiens].
Length = 577
Score = 120 bits (301), Expect = 5e-27
Identities = 128/507 (25%), Positives = 217/507 (42%), Gaps = 18/507 (3%)
Frame = +1
Query: 463 GLRKGDRLGMWGPNSYAWVLIQLATAQAGIILVSVNPAYQAPELEYALKKVGCKALVFPK 642
GL++GD L + P W L+ + + GII + +A ++ Y L+ K +V
Sbjct: 107 GLQQGDHLALMLPRVPEWWLVAVGCMRTGIIFIPATILLKAKDILYRLQLSKAKGIVTID 166
Query: 643 QFKTQQYYNILKQICPEVEKAKPGALKSQRLPDLTIVISVDTPLPGTLFLDDVVAAGNQE 822
++ + + CP ++ T ++ D G L +V + + E
Sbjct: 167 ALASE--VDSIASQCPSLK---------------TKLLVSDHSREGWLDFRSLVKSASPE 209
Query: 823 QHLAQLRHTQKFLSCHDPINIQFTSGTTGSPKGATLSHYNIVNNSNMIGERLQLSQKTAE 1002
HT DP+ I FTSGTTG PK A SH G LQ S +
Sbjct: 210 -------HTCVKSKTLDPMVIFFTSGTTGFPKMAKHSH----------GLALQPSFPGSR 252
Query: 1003 KSRMVLPTPLYHCLGSVGGTMVSLMH-------GVTLILSS-PVFDGKKALEAISRERGS 1158
K R + + + CL G + ++ G T+ + P FD K ++ + + +
Sbjct: 253 KLRSLKTSDVSWCLSDSGWIVATIWTLVEPWTAGCTVFIHHLPQFDTKVIIQTLLKYPIN 312
Query: 1159 FLYGTPTMFVDILNQPDFSSYDISAICGGVIAGSPVPPELIRAIINKMNMKELVVAYGTT 1338
+G +++ IL Q DF+S A+ G V P+ + + L YG +
Sbjct: 313 HFWGVSSIYRMILQQ-DFTSIRFPALEHCYTGGEVVLPKDQEEWKRRTGLL-LYENYGQS 370
Query: 1339 ENSPVTFMNFPEDTMEQKAESVGRVMPHTEAQIMNMETRTLAELNTPGELCIR-----GY 1503
E + + M+ K +G+ P + Q+++ + ++ NT G + IR
Sbjct: 371 ETGLICATYWG---MKIKPGFMGKATPPYDVQVID-DKGSILPPNTEGNIGIRIKPVRPV 426
Query: 1504 CVMQGYWGDPQKTDEVIGQDKWYRTGDIAVMDEQGFCRIVGRAKDMIIRGGENIYPAELE 1683
+ Y GDP+KT +V D +Y TGD MDE+G+ +GR+ D+I G I PAE+E
Sbjct: 427 SLFMCYEGDPEKTAKVECGD-FYNTGDRGKMDEEGYICFLGRSDDIINASGYRIGPAEVE 485
Query: 1684 DFFHTHPXXXXXXXXXXKDNRMGEEICACI-----RLKKGEKTTAEEIKAFCKGKISHFK 1848
HP D GE + A I L + +E++ K + +K
Sbjct: 486 SALVEHPAVAESAVVGSPDPIRGEVVKAFIVLTPQFLSHDKDQLTKELQQHVKSVTAPYK 545
Query: 1849 IPRYIVFVTDYPLTVSGKVQKFKLREQ 1929
PR + FV++ P T++GK+++ +LR++
Sbjct: 546 YPRKVEFVSELPKTITGKIERKELRKK 572
>ref|NP_060358.2| acyl-coenzyme A synthetase ACSM5, mitochondrial precursor [Homo
sapiens].
Length = 579
Score = 117 bits (294), Expect = 3e-26
Identities = 130/523 (24%), Positives = 219/523 (41%), Gaps = 12/523 (2%)
Frame = +1
Query: 397 IRLTFAQLKEQVDKAAAGLL-SIGLRKGDRLGMWGPNSYAWVLIQLATAQAGIILVSVNP 573
I+ +F +L +Q KAA L + GL+ GDR+ + P W L+ +A + G +++
Sbjct: 88 IKWSFEELGKQSRKAANVLGGACGLQPGDRMMLVLPRLPEWWLVSVACMRTGTVMIPGVT 147
Query: 574 AYQAPELEYALKKVGCKALVFPKQFKTQQYYNILKQICPEVEKAKPGALKSQRLPDLTIV 753
+L+Y L+ K+++ + + + CP ++ T +
Sbjct: 148 QLTEKDLKYRLQASRAKSIITSDSLAPR--VDAISAECPSLQ---------------TKL 190
Query: 754 ISVDTPLPGTLFLDDVVAAGNQEQHLAQLRHTQKFLSCHDPINIQFTSGTTGSPKGATLS 933
+ D+ PG L +++ + E + + + DP+ I FTSGTTG+PK S
Sbjct: 191 LVSDSSRPGWLNFRELLREASTEHNCMRTKS-------RDPLAIYFTSGTTGAPKMVEHS 243
Query: 934 HYNIVNNSNMIGERLQLSQKTAEKSRMVLPTPLYHCLGSVGGTMVSLMHGVTLILSS-PV 1110
+ G R +S + T + + + +G + + P
Sbjct: 244 QSSYGLGFVASGRRWV----ALTESDIFWNTTDTGWVKAAWTLFSAWPNGSCIFVHELPR 299
Query: 1111 FDGKKALEAISRERGSFLYGTPTMFVDILNQPDFSSYDISAICGGVIAGSPVPPELIRAI 1290
D K L +S+ + L PT+F +L Q D + Y ++ + G + P+ +R
Sbjct: 300 VDAKVILNTLSKFPITTLCCVPTIF-RLLVQEDLTRYQFQSLRHCLTGGEALNPD-VREK 357
Query: 1291 INKMNMKELVVAYGTTENSPVTFMNFPEDTMEQKAESVGRVMPHTEAQIMNMETRTLAEL 1470
EL YG +E V P+ M+ K+ S+G+ P + QI++ E L
Sbjct: 358 WKHQTGVELYEGYGQSET--VVICANPKG-MKIKSGSMGKASPPYDVQIVDDEGNVLPP- 413
Query: 1471 NTPGELCIR-----GYCVMQGYWGDPQKTDEVIGQDKWYRTGDIAVMDEQGFCRIVGRAK 1635
G + +R +C Y +P+KT Q +Y TGD A MD+ G+ +GR
Sbjct: 414 GEEGNVAVRIRPTRPFCFFNCYLDNPEKT-AASEQGDFYITGDRARMDKDGYFWFMGRND 472
Query: 1636 DMIIRGGENIYPAELEDFFHTHPXXXXXXXXXXKDNRMGEEICACIRLKKG-----EKTT 1800
D+I I P E+E HP D GE + A I L +
Sbjct: 473 DVINSSSYRIGPVEVESALAEHPAVLESAVVSSPDPIRGEVVKAFIVLTPAYSSHDPEAL 532
Query: 1801 AEEIKAFCKGKISHFKIPRYIVFVTDYPLTVSGKVQKFKLREQ 1929
E++ K + +K PR + FV++ P TVSGK+Q+ KLR Q
Sbjct: 533 TRELQEHVKRVTAPYKYPRKVAFVSELPKTVSGKIQRSKLRSQ 575
>ref|NP_001010845.1| acyl-coenzyme A synthetase ACSM2A, mitochondrial [Homo sapiens].
Length = 577
Score = 109 bits (272), Expect = 1e-23
Identities = 130/524 (24%), Positives = 218/524 (41%), Gaps = 17/524 (3%)
Frame = +1
Query: 409 FAQLKEQVDKAAAGLL-SIGLRKGDRLGMWGPNSYAWVLIQLATAQAGIILVSVNPAYQA 585
F +L E +AA L + GL++GDR+ + P W L+ L +AG+I + ++
Sbjct: 83 FRELSENSQQAANVLSGACGLQRGDRVAVVLPRVPEWWLVILGCIRAGLIFMPGTIQMKS 142
Query: 586 PELEYALKKVGCKALVFPKQFKTQQYYNILKQICPEVEKAKPGALKSQRLPDLTIVISV- 762
++ Y L+ KA+V + + EV+ + P L I + V
Sbjct: 143 TDILYRLQMSKAKAIVAGDE------------VIQEVDTV------ASECPSLRIKLLVS 184
Query: 763 DTPLPGTLFLDDVVAAGNQEQHLAQLRHTQKFLSCHDPINIQFTSGTTGSPKGATLSHYN 942
+ G L ++ + H + + I FTSGT+G PK A S+ +
Sbjct: 185 EKSCDGWLNFKKLLNEASTTHHCVET-------GSQEASAIYFTSGTSGLPKMAEHSYSS 237
Query: 943 IVNNSNMIGERLQLSQKTAEKSRMVLPTPLYHCLGSVGGTMVSLMH-----GVTLILSSP 1107
+ + M L + ++ + T G + + SLM T + P
Sbjct: 238 LGLKAKMDAGWTGL--QASDIMWTISDT------GWILNILCSLMEPWALGACTFVHLLP 289
Query: 1108 VFDGKKALEAISRERGSFLYGTPTMFVDILNQPDFSSYDISAICGGVIAGSPVPPELIRA 1287
FD L+ +S + G P ++ +L Q D SSY + V G + PE +
Sbjct: 290 KFDPLVILKTLSSYPIKSMMGAPIVYRMLLQQ-DLSSYKFPHLQNCVTVGESLLPETLEN 348
Query: 1288 IINKMNMKELVVAYGTTENSPVTFMNFPEDTMEQKAESVGRVMPHTEAQIMNMETRTLAE 1467
+ + ++ +YG TE ++ TM+ K +G + QI++ + L
Sbjct: 349 WRAQTGL-DIRESYGQTETGLTCMVS---KTMKIKPGYMGTAASCYDVQIIDDKGNVLPP 404
Query: 1468 LNTPGELCIR-----GYCVMQGYWGDPQKTDEVIGQDKWYRTGDIAVMDEQGFCRIVGRA 1632
T G++ IR + GY +P KT I D W GD + DE G+ + +GRA
Sbjct: 405 -GTEGDIGIRVKPIRPIGIFSGYVDNPDKTAANIRGDFWL-LGDRGIKDEDGYFQFMGRA 462
Query: 1633 KDMIIRGGENIYPAELEDFFHTHPXXXXXXXXXXKDNRMGEEICACI-----RLKKGEKT 1797
D+I G I P+E+E+ HP D GE + A + L +
Sbjct: 463 DDIINSSGYRIGPSEVENALMEHPAVVETAVISSPDPVRGEVVKAFVVLASQFLSHDPEQ 522
Query: 1798 TAEEIKAFCKGKISHFKIPRYIVFVTDYPLTVSGKVQKFKLREQ 1929
+E++ K + +K PR I FV + P TV+GK+Q+ KLR++
Sbjct: 523 LTKELQQHVKSVTAPYKYPRKIEFVLNLPKTVTGKIQRAKLRDK 566
>ref|NP_001098539.1| acyl-coenzyme A synthetase ACSM2B, mitochondrial [Homo sapiens].
Length = 577
Score = 108 bits (270), Expect = 2e-23
Identities = 129/521 (24%), Positives = 215/521 (41%), Gaps = 14/521 (2%)
Frame = +1
Query: 409 FAQLKEQVDKAAAGLLS--IGLRKGDRLGMWGPNSYAWVLIQLATAQAGIILVSVNPAYQ 582
F +L E + AA +LS GL++GDR+ + P W L+ L +AG+I + +
Sbjct: 83 FRELSEN-SQQAANILSGACGLQRGDRVAVMLPRVPEWWLVILGCIRAGLIFMPGTIQMK 141
Query: 583 APELEYALKKVGCKALVFPKQFKTQQYYNILKQICPEVEKAKPGALKSQRLPDLTIVISV 762
+ ++ Y L+ KA+V + + EV+ + P L I + V
Sbjct: 142 STDILYRLQMSKAKAIVAGDE------------VIQEVDTV------ASECPSLRIKLLV 183
Query: 763 -DTPLPGTLFLDDVVAAGNQEQHLAQLRHTQKFLSCHDPINIQFTSGTTGSPKGATLSHY 939
+ G L ++ + H + + I FTSGT+G PK A S+
Sbjct: 184 SEKSCDGWLNFKKLLNEASTTHHCVET-------GSQEASAIYFTSGTSGLPKMAEHSYS 236
Query: 940 NIVNNSNMIGERLQLSQKTAEKSRMVLPTPLYHCLGSVGGTMVSLMHGV-TLILSSPVFD 1116
++ + M L M + L +G + S G T + P FD
Sbjct: 237 SLGLKAKMDAGWTGLQASDI----MWTISDTGWILNILGSLLESWTLGACTFVHLLPKFD 292
Query: 1117 GKKALEAISRERGSFLYGTPTMFVDILNQPDFSSYDISAICGGVIAGSPVPPELIRAIIN 1296
L+ +S + G P ++ +L Q D SSY + + G + PE +
Sbjct: 293 PLVILKTLSSYPIKSMMGAPIVYRMLLQQ-DLSSYKFPHLQNCLAGGESLLPETLENWRA 351
Query: 1297 KMNMKELVVAYGTTENSPVTFMNFPEDTMEQKAESVGRVMPHTEAQIMNMETRTLAELNT 1476
+ + ++ YG TE ++ TM+ K +G + Q+++ + L T
Sbjct: 352 QTGL-DIREFYGQTETGLTCMVS---KTMKIKPGYMGTAASCYDVQVIDDKGNVLPP-GT 406
Query: 1477 PGELCIR-----GYCVMQGYWGDPQKTDEVIGQDKWYRTGDIAVMDEQGFCRIVGRAKDM 1641
G++ IR + GY +P KT I D W GD + DE G+ + +GRA D+
Sbjct: 407 EGDIGIRVKPIRPIGIFSGYVENPDKTAANIRGDFWL-LGDRGIKDEDGYFQFMGRADDI 465
Query: 1642 IIRGGENIYPAELEDFFHTHPXXXXXXXXXXKDNRMGEEICACI-----RLKKGEKTTAE 1806
I G I P+E+E+ HP D GE + A + L + +
Sbjct: 466 INSSGYRIGPSEVENALMKHPAVVETAVISSPDPVRGEVVKAFVILASQFLSHDPEQLTK 525
Query: 1807 EIKAFCKGKISHFKIPRYIVFVTDYPLTVSGKVQKFKLREQ 1929
E++ K + +K PR I FV + P TV+GK+Q+ KLR++
Sbjct: 526 ELQQHVKSVTAPYKYPRKIEFVLNLPKTVTGKIQRTKLRDK 566
>ref|NP_872423.3| acyl-coenzyme A synthetase ACSM2B, mitochondrial [Homo sapiens].
Length = 577
Score = 108 bits (270), Expect = 2e-23
Identities = 129/521 (24%), Positives = 215/521 (41%), Gaps = 14/521 (2%)
Frame = +1
Query: 409 FAQLKEQVDKAAAGLLS--IGLRKGDRLGMWGPNSYAWVLIQLATAQAGIILVSVNPAYQ 582
F +L E + AA +LS GL++GDR+ + P W L+ L +AG+I + +
Sbjct: 83 FRELSEN-SQQAANILSGACGLQRGDRVAVMLPRVPEWWLVILGCIRAGLIFMPGTIQMK 141
Query: 583 APELEYALKKVGCKALVFPKQFKTQQYYNILKQICPEVEKAKPGALKSQRLPDLTIVISV 762
+ ++ Y L+ KA+V + + EV+ + P L I + V
Sbjct: 142 STDILYRLQMSKAKAIVAGDE------------VIQEVDTV------ASECPSLRIKLLV 183
Query: 763 -DTPLPGTLFLDDVVAAGNQEQHLAQLRHTQKFLSCHDPINIQFTSGTTGSPKGATLSHY 939
+ G L ++ + H + + I FTSGT+G PK A S+
Sbjct: 184 SEKSCDGWLNFKKLLNEASTTHHCVET-------GSQEASAIYFTSGTSGLPKMAEHSYS 236
Query: 940 NIVNNSNMIGERLQLSQKTAEKSRMVLPTPLYHCLGSVGGTMVSLMHGV-TLILSSPVFD 1116
++ + M L M + L +G + S G T + P FD
Sbjct: 237 SLGLKAKMDAGWTGLQASDI----MWTISDTGWILNILGSLLESWTLGACTFVHLLPKFD 292
Query: 1117 GKKALEAISRERGSFLYGTPTMFVDILNQPDFSSYDISAICGGVIAGSPVPPELIRAIIN 1296
L+ +S + G P ++ +L Q D SSY + + G + PE +
Sbjct: 293 PLVILKTLSSYPIKSMMGAPIVYRMLLQQ-DLSSYKFPHLQNCLAGGESLLPETLENWRA 351
Query: 1297 KMNMKELVVAYGTTENSPVTFMNFPEDTMEQKAESVGRVMPHTEAQIMNMETRTLAELNT 1476
+ + ++ YG TE ++ TM+ K +G + Q+++ + L T
Sbjct: 352 QTGL-DIREFYGQTETGLTCMVS---KTMKIKPGYMGTAASCYDVQVIDDKGNVLPP-GT 406
Query: 1477 PGELCIR-----GYCVMQGYWGDPQKTDEVIGQDKWYRTGDIAVMDEQGFCRIVGRAKDM 1641
G++ IR + GY +P KT I D W GD + DE G+ + +GRA D+
Sbjct: 407 EGDIGIRVKPIRPIGIFSGYVENPDKTAANIRGDFWL-LGDRGIKDEDGYFQFMGRADDI 465
Query: 1642 IIRGGENIYPAELEDFFHTHPXXXXXXXXXXKDNRMGEEICACI-----RLKKGEKTTAE 1806
I G I P+E+E+ HP D GE + A + L + +
Sbjct: 466 INSSGYRIGPSEVENALMKHPAVVETAVISSPDPVRGEVVKAFVILASQFLSHDPEQLTK 525
Query: 1807 EIKAFCKGKISHFKIPRYIVFVTDYPLTVSGKVQKFKLREQ 1929
E++ K + +K PR I FV + P TV+GK+Q+ KLR++
Sbjct: 526 ELQQHVKSVTAPYKYPRKIEFVLNLPKTVTGKIQRTKLRDK 566
>ref|NP_115890.2| acetyl-coenzyme A synthetase 2-like, mitochondrial precursor [Homo
sapiens].
Length = 689
Score = 104 bits (259), Expect = 4e-22
Identities = 136/561 (24%), Positives = 222/561 (39%), Gaps = 30/561 (5%)
Frame = +1
Query: 334 CLDATAQKIPDKEALVVFHEN----IRLTFAQLKEQVDKAAAGLLSIGLRKGDRLGMWGP 501
CLD +K P+ AL+ + +R+T+ +L E + A L G+ +GDR+ ++ P
Sbjct: 114 CLDQHVRKSPESVALIWERDEPGTEVRITYRELLETTCRLANTLKRHGVHRGDRVAIYMP 173
Query: 502 NSYAWVLIQLATAQAGIILVSVNPAYQAPELEYALKKVGCKALVFPKQFKTQQYYNILKQ 681
S V LA A+ G + + + A L + CK ++ Q LK+
Sbjct: 174 VSPLAVAAMLACARIGAVHTVIFAGFSAESLAGRINDAKCKVVITFNQGLRGGRVVELKK 233
Query: 682 ICPEVEKAKP---GALKSQRLPDLTIVISVDTPLPGTLFLDDVVAAGNQEQHLAQLRHTQ 852
I E K P L + R + + +D PL + +D V A
Sbjct: 234 IVDEAVKHCPTVQHVLVAHRTDNKVHMGDLDVPLEQEMAKEDPVCA-------------P 280
Query: 853 KFLSCHDPINIQFTSGTTGSPKGATLSHYNIVNNSNMIGERLQLSQKTAEKSRMVLPTPL 1032
+ + D + + +TSG+TG PKG IV+ L+ K + P +
Sbjct: 281 ESMGSEDMLFMLYTSGSTGMPKG-------IVHTQAGYLLYAALTHKLVFDHQ---PGDI 330
Query: 1033 YHCLGSVGG-------TMVSLMHGVTLIL--SSPVF-DGKKALEAISRERGSFLYGTPTM 1182
+ C+ +G L +G T +L S+PV+ + + E + R + + YG PT
Sbjct: 331 FGCVADIGWITGHSYVVYGPLCNGATSVLFESTPVYPNAGRYWETVERLKINQFYGAPTA 390
Query: 1183 FVDILNQPD--FSSYDISAICGGVIAGSPVPPEL---IRAIINKMNMKELVVAYGTTENS 1347
+L D YD S++ G P+ E + ++ LV + TE
Sbjct: 391 VRLLLKYGDAWVKKYDRSSLRTLGSVGEPINCEAWEWLHRVVGDSRC-TLVDTWWQTETG 449
Query: 1348 PVTFMNFP-EDTMEQKAESVGRVMPHTEAQIMNMETRTLAELNTPGELCIRGYC--VMQG 1518
+ P E+ E R +M+ + + N G LCI + +
Sbjct: 450 GICIAPRPSEEGAEILPAMAMRPFFGIVPVLMDEKGSVVEGSNVSGALCISQAWPGMART 509
Query: 1519 YWGDPQKTDEVI--GQDKWYRTGDIAVMDEQGFCRIVGRAKDMIIRGGENIYPAELEDFF 1692
+GD Q+ + +Y TGD A E G+ +I GR D+I G + AE+ED
Sbjct: 510 IYGDHQRFVDAYFKAYPGYYFTGDGAYRTEGGYYQITGRMDDVINISGHRLGTAEIEDAI 569
Query: 1693 HTHPXXXXXXXXXXKDNRMGEEICACIRLKKG---EKTTAEEIKAFCKGKISHFKIPRYI 1863
HP + GE A I +K +E+K+ KI+ + +P I
Sbjct: 570 ADHPAVPESAVIGYPHDIKGEAAFAFIVVKDSAGDSDVVVQELKSMVATKIAKYAVPDEI 629
Query: 1864 VFVTDYPLTVSGKVQKFKLRE 1926
+ V P T SGKV + LR+
Sbjct: 630 LVVKRLPKTRSGKVMRRLLRK 650
>ref|NP_005613.2| acyl-coenzyme A synthetase ACSM3, mitochondrial isoform 1 [Homo
sapiens].
Length = 586
Score = 98.6 bits (244), Expect = 2e-20
Identities = 124/531 (23%), Positives = 221/531 (41%), Gaps = 18/531 (3%)
Frame = +1
Query: 391 ENIRLTFAQLKEQVDKAAAGLLS--IGLRKGDRLGMWGPNSYAWVLIQLATAQAGIILVS 564
E +R +F +L + + A +LS L++GDR+ + P W L +A + G +L+
Sbjct: 91 EEMRWSFEELGS-LSRKFANILSEACSLQRGDRVILILPRVPEWWLANVACLRTGTVLIP 149
Query: 565 VNPAYQAPELEYALKKVGCKALVFPKQFKTQQYYNILKQICPEVEKAKPGALKSQRLPDL 744
++ Y L+ ++ + P V+ A K + L
Sbjct: 150 GTTQLTQKDILYRLQSSKANCIITNDV------------LAPAVDAV---ASKCENLHSK 194
Query: 745 TIVISVDTPLPGTLFLDDVVAAGNQEQHLAQLRHTQKFLSCHDPINIQFTSGTTGSPKGA 924
IV + G L +++ + + +H ++ + I FTSGT+G PK
Sbjct: 195 LIVS--ENSREGWGNLKELMKHASDSHTCVKTKH-------NEIMAIFFTSGTSGYPKMT 245
Query: 925 TLSHYNIVNNSNMIGERLQLSQKTAEKSRMVLPTPLYHCLGS------VGGTMVSLMHGV 1086
+H + ++ G R L ++ T S + G V H
Sbjct: 246 AHTHSSFGLGLSVNG-RFWLDLTPSDVMWNTSDTGWAKSAWSSVFSPWIQGACVFTHH-- 302
Query: 1087 TLILSSPVFDGKKALEAISRERGSFLYGTPTMFVDILNQPDFSSYDISAICGGVIAGSPV 1266
P F+ L+ +S+ + PT++ +L Q D +SY ++ V AG P+
Sbjct: 303 -----LPRFEPTSILQTLSKYPITVFCSAPTVY-RMLVQNDITSYKFKSLKHCVSAGEPI 356
Query: 1267 PPELIRAIINKMNMKELVVAYGTTENSPVTFMNFPEDTMEQKAESVGRVMPHTEAQIMNM 1446
P++ NK + ++ YG TE + NF M+ K S+G+ P + +I+++
Sbjct: 357 TPDVTEKWRNKTGL-DIYEGYGQTETVLICG-NFKG--MKIKPGSMGKPSPAFDVKIVDV 412
Query: 1447 ETRTLAELNTPGELCI-----RGYCVMQGYWGDPQKTDEVIGQDKWYRTGDIAVMDEQGF 1611
L G++ I R + + Y +P KT + + +Y TGD MD+ G+
Sbjct: 413 NGNVLPP-GQEGDIGIQVLPNRPFGLFTHYVDNPSKTASTL-RGNFYITGDRGYMDKDGY 470
Query: 1612 CRIVGRAKDMIIRGGENIYPAELEDFFHTHPXXXXXXXXXXKDNRMGEEICACIRLKKGE 1791
V RA D+I+ G I P E+E+ + HP D GE + A + L
Sbjct: 471 FWFVARADDVILSSGYRIGPFEVENALNEHPSVAESAVVSSPDPIRGEVVKAFVVLNPDY 530
Query: 1792 KT-----TAEEIKAFCKGKISHFKIPRYIVFVTDYPLTVSGKVQKFKLREQ 1929
K+ +EI+ K + +K PR + F+ + P T+SGK ++ +LR++
Sbjct: 531 KSHDQEQLIKEIQEHVKKTTAPYKYPRKVEFIQELPKTISGKTKRNELRKK 581
>ref|NP_001120686.1| acyl-CoA synthetase family member 3, mitochondrial precursor [Homo
sapiens].
Length = 576
Score = 98.6 bits (244), Expect = 2e-20
Identities = 98/379 (25%), Positives = 160/379 (42%), Gaps = 36/379 (9%)
Frame = +1
Query: 883 IQFTSGTTGSPKGATLSHYNIVNNSNMIGERLQLSQKTA-EKSRMVLPT-PLYHCLGSVG 1056
I +TSGTTG PKG +H NI + + G L K A K ++L PL+H G V
Sbjct: 199 IIYTSGTTGRPKGVLSTHQNI--RAVVTG----LVHKWAWTKDDVILHVLPLHHVHGVVN 252
Query: 1057 GTMVSLMHGVTLILSSPVFDGKKALEA-ISRE--RGSFLYGTPTMFVDILN-------QP 1206
+ L G T ++ P F ++ E +S E R + PT++ ++ QP
Sbjct: 253 ALLCPLWVGATCVMM-PEFSPQQVWEKFLSSETPRINVFMAVPTIYTKLMEYYDRHFTQP 311
Query: 1207 DFSSYDISAICGG----VIAGSPVPPELIRAIINKMNMKELVVAYGTTENSPVTFMNFPE 1374
+ + A+C +++GS P + + L+ YG TE ++ P
Sbjct: 312 HAQDF-LRAVCEEKIRLMVSGSAALPLPVLEKWKNITGHTLLERYGMTEIGMA--LSGPL 368
Query: 1375 DTMEQKAESVGRVMPHTEAQIMNMETRTLAELNT-------------------PGELCIR 1497
T + SVG +P + +I++ + A T GEL +R
Sbjct: 369 TTAVRLPGSVGTPLPGVQVRIVSENPQREACSYTIHAEGDERGTKVTPGFEEKEGELLVR 428
Query: 1498 GYCVMQGYWGDPQKTDEVIGQDKWYRTGDIAVMDEQGFCRIVGRAK-DMIIRGGENIYPA 1674
G V + YW P++T D W++TGD V + G I GR D+I GG +
Sbjct: 429 GPSVFREYWNKPEETKSAFTLDGWFKTGDTVVFKD-GQYWIRGRTSVDIIKTGGYKVSAL 487
Query: 1675 ELEDFFHTHPXXXXXXXXXXKDNRMGEEICACIRLKKGEKTTAEEIKAFCKGKISHFKIP 1854
E+E HP D G+ + A + L++G + E+K + + ++ + +P
Sbjct: 488 EVEWHLLAHPSITDVAVIGVPDMTWGQRVTAVVTLREGHSLSHRELKEWARNVLAPYAVP 547
Query: 1855 RYIVFVTDYPLTVSGKVQK 1911
+V V + P GK+ K
Sbjct: 548 SELVLVEEIPRNQMGKIDK 566
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 89,140,862
Number of extensions: 2791864
Number of successful extensions: 12358
Number of sequences better than 1.0e-05: 30
Number of HSP's gapped: 12225
Number of HSP's successfully gapped: 33
Length of query: 689
Length of database: 18,297,164
Length adjustment: 109
Effective length of query: 580
Effective length of database: 14,704,088
Effective search space: 8528371040
Effective search space used: 8528371040
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002234
(2067 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_722502.1| acyl-CoA synthetase family member 2, mitochondr... 982 0.0
Alignment gi|NP_848873.1| acyl-coenzyme A synthetase ACSM5, mitochondrial... 125 1e-28
Alignment gi|NP_848501.1| acyl-coenzyme A synthetase ACSM4, mitochondrial... 124 2e-28
Alignment gi|NP_542142.1| acetyl-coenzyme A synthetase 2-like, mitochondr... 111 2e-24
Alignment gi|NP_001171448.1| acyl-coenzyme A synthetase ACSM2, mitochondr... 109 9e-24
Alignment gi|NP_666309.1| acyl-coenzyme A synthetase ACSM2, mitochondrial... 109 9e-24
Alignment gi|NP_473435.1| acyl-coenzyme A synthetase ACSM1, mitochondrial... 106 6e-23
Alignment gi|NP_659181.2| acyl-CoA synthetase family member 3, mitochondr... 106 6e-23
Alignment gi|NP_001171449.1| acyl-coenzyme A synthetase ACSM2, mitochondr... 103 5e-22
Alignment gi|NP_997607.2| acyl-coenzyme A synthetase ACSM3, mitochondrial... 101 2e-21
>ref|NP_722502.1| acyl-CoA synthetase family member 2, mitochondrial precursor [Mus
musculus].
Length = 615
Score = 982 bits (2539), Expect = 0.0
Identities = 485/615 (78%), Positives = 536/615 (87%)
Frame = +1
Query: 106 MAVYLGMLRVVRLCAGRPEVLGAGGGLSRVWQEARLWGVRPLSSGEVDHTAPLPIGGLSY 285
MAVY GMLR RLC G LSR ++L VR LSSG V+ T PLPIGGLSY
Sbjct: 1 MAVYHGMLRFGRLCIASLGARGPRTLLSRPRPNSKLQSVRALSSGMVNCTNPLPIGGLSY 60
Query: 286 IQGNTKLRLINKTVGWCLDATAQKIPDKEALVVFHENIRLTFAQLKEQVDKAAAGLLSIG 465
IQG+T L+N TVG CLDATAQ+ PD+EALV+ HENIRL FAQLKE+VDKAA+GLLSIG
Sbjct: 61 IQGHTDSHLVNTTVGECLDATAQRFPDREALVILHENIRLNFAQLKEEVDKAASGLLSIG 120
Query: 466 LRKGDRLGMWGPNSYAWVLIQLATAQAGIILVSVNPAYQAPELEYALKKVGCKALVFPKQ 645
LRKGDRLGMWGPNSYAWVLIQLATAQAGIILVSVNPAYQ+ ELEY L+KVGCK +VFPKQ
Sbjct: 121 LRKGDRLGMWGPNSYAWVLIQLATAQAGIILVSVNPAYQSSELEYVLRKVGCKGIVFPKQ 180
Query: 646 FKTQQYYNILKQICPEVEKAKPGALKSQRLPDLTIVISVDTPLPGTLFLDDVVAAGNQEQ 825
FKTQQYY+ILKQ+CPE+EKA+PGALKS+RLPDLT VISVD PLPGTL LDD+VAAG +EQ
Sbjct: 181 FKTQQYYDILKQVCPELEKAQPGALKSERLPDLTTVISVDAPLPGTLLLDDIVAAGGKEQ 240
Query: 826 HLAQLRHTQKFLSCHDPINIQFTSGTTGSPKGATLSHYNIVNNSNMIGERLQLSQKTAEK 1005
+LAQLR+ Q+FLSC+DPINIQFTSGTTG+PKGATLSH+NIVNNS +IG+RL++ KTAE+
Sbjct: 241 NLAQLRYNQRFLSCYDPINIQFTSGTTGNPKGATLSHHNIVNNSMLIGQRLKMPTKTAEE 300
Query: 1006 SRMVLPTPLYHCLGSVGGTMVSLMHGVTLILSSPVFDGKKALEAISRERGSFLYGTPTMF 1185
R+VLP+PLYHCLGSVGGTMVS+MHG TL+LSSP F+GKKALEAISRE+G+ LYGTPTMF
Sbjct: 301 LRLVLPSPLYHCLGSVGGTMVSMMHGATLLLSSPSFNGKKALEAISREKGTLLYGTPTMF 360
Query: 1186 VDILNQPDFSSYDISAICGGVIAGSPVPPELIRAIINKMNMKELVVAYGTTENSPVTFMN 1365
VDILNQPDFSSYD ++I GGVIAGSP PPELIRAIINKMNMKELVV YGTTENSPVTFMN
Sbjct: 361 VDILNQPDFSSYDFTSIRGGVIAGSPAPPELIRAIINKMNMKELVVVYGTTENSPVTFMN 420
Query: 1366 FPEDTMEQKAESVGRVMPHTEAQIMNMETRTLAELNTPGELCIRGYCVMQGYWGDPQKTD 1545
FPEDT+EQKA SVGR+MPHTEAQI+N+ET L LN PGEL IRGYCVMQGYWG+PQKT
Sbjct: 421 FPEDTLEQKAGSVGRIMPHTEAQIVNVETGELTNLNVPGELYIRGYCVMQGYWGEPQKTF 480
Query: 1546 EVIGQDKWYRTGDIAVMDEQGFCRIVGRAKDMIIRGGENIYPAELEDFFHTHPXXXXXXX 1725
E +GQDKWYRTGDIA+MDEQGFC+IVGR+KDMIIRGGENIYPAELEDFF HP
Sbjct: 481 ETVGQDKWYRTGDIALMDEQGFCKIVGRSKDMIIRGGENIYPAELEDFFLKHPQVQEAQV 540
Query: 1726 XXXKDNRMGEEICACIRLKKGEKTTAEEIKAFCKGKISHFKIPRYIVFVTDYPLTVSGKV 1905
KD RMGEEICACIRLK GE TTAEEIKAFCKGKISHFKIPRYIVFV YPLT+SGK+
Sbjct: 541 VGVKDERMGEEICACIRLKSGETTTAEEIKAFCKGKISHFKIPRYIVFVEGYPLTISGKI 600
Query: 1906 QKFKLREQMEQRLNL 1950
QKFKLREQMEQ L L
Sbjct: 601 QKFKLREQMEQHLKL 615
>ref|NP_848873.1| acyl-coenzyme A synthetase ACSM5, mitochondrial precursor [Mus
musculus].
Length = 578
Score = 125 bits (315), Expect = 1e-28
Identities = 134/523 (25%), Positives = 218/523 (41%), Gaps = 12/523 (2%)
Frame = +1
Query: 397 IRLTFAQLKEQVDKAAAGLLSI-GLRKGDRLGMWGPNSYAWVLIQLATAQAGIILVSVNP 573
++ TF +L +Q KAA L + GL+ GDR+ + P W LI +A + G++++
Sbjct: 87 VKWTFEELGKQSRKAANVLEGVCGLQPGDRMMLVLPRLPDWWLISVACMRTGVVMIPGVS 146
Query: 574 AYQAPELEYALKKVGCKALVFPKQFKTQQYYNILKQICPEVEKAKPGALKSQRLPDLTIV 753
A +L+Y L+ K++V Q + + CP ++ T +
Sbjct: 147 QLTAKDLKYRLQAARAKSIVTSDALAPQ--VDAISADCPSLQ---------------TKL 189
Query: 754 ISVDTPLPGTLFLDDVVAAGNQEQHLAQLRHTQKFLSCHDPINIQFTSGTTGSPKGATLS 933
+ DT PG + +++ A + E + + R D + I FTSGTTG+PK S
Sbjct: 190 LVSDTSRPGWINFRELLRAASPEHNCVRTRSG-------DSVAIYFTSGTTGAPKMVEHS 242
Query: 934 HYNIVNNSNMIGERLQLSQKTAEKSRMVLPTPLYHCLGSVGGTMVSLMHGVTLILSS-PV 1110
+ G R +S + T + + + +G + + P
Sbjct: 243 QSSYGLGFVASGRRWM----ALTESDIFWNTTDTGWVKAAWTLFSAWSNGACIFVHELPR 298
Query: 1111 FDGKKALEAISRERGSFLYGTPTMFVDILNQPDFSSYDISAICGGVIAGSPVPPELIRAI 1290
D K L + R + L PT+F +L Q D + Y + + G + P+ +R
Sbjct: 299 VDAKTILNTLCRFPITTLCCVPTLF-RLLVQEDLTRYKFQCLRHCLTGGEALNPD-VRDK 356
Query: 1291 INKMNMKELVVAYGTTENSPVTFMNFPEDTMEQKAESVGRVMPHTEAQIMNMETRTLAEL 1470
EL YG +E + V N T+ K+ S+G+ P + QI++ E L
Sbjct: 357 WKSQTGLELHEGYGQSE-TVVICGNSRNSTI--KSGSMGKASPPYDVQIVDEEGNVLPP- 412
Query: 1471 NTPGELCIR-----GYCVMQGYWGDPQKTDEVIGQDKWYRTGDIAVMDEQGFCRIVGRAK 1635
G + +R +C Y +P+KT Q +Y TGD A MDE G+ +GR
Sbjct: 413 GKEGNIAVRIKPTRPFCFFNCYLDNPEKT-AASEQGDFYITGDRAHMDEDGYFWFLGRND 471
Query: 1636 DMIIRGGENIYPAELEDFFHTHPXXXXXXXXXXKDNRMGEEICACIRLKKG-----EKTT 1800
D+I I P E+E HP D GE + A I L +
Sbjct: 472 DVINSSSYRIGPVEVESALAEHPAVLESAVVSSPDPIRGEVVKAFIVLSPAYASHDPEAL 531
Query: 1801 AEEIKAFCKGKISHFKIPRYIVFVTDYPLTVSGKVQKFKLREQ 1929
E++ K + +K PR + F+++ P TVSGK+ + KLR Q
Sbjct: 532 TRELQEHVKTVTAPYKYPRKVAFISELPKTVSGKILRSKLRNQ 574
>ref|NP_848501.1| acyl-coenzyme A synthetase ACSM4, mitochondrial precursor [Mus
musculus].
Length = 580
Score = 124 bits (312), Expect = 2e-28
Identities = 135/526 (25%), Positives = 225/526 (42%), Gaps = 13/526 (2%)
Frame = +1
Query: 391 ENIRLTFAQLKEQVDKAAAGLLS-IGLRKGDRLGMWGPNSYAWVLIQLATAQAGIILVSV 567
+ ++ +F +L KAA L GL++GDR+ + P W LI +A + G++ +
Sbjct: 85 DEVKWSFQELGSLSRKAANVLTKPCGLQRGDRVAVILPRIPEWWLINVACMRTGLVFMPG 144
Query: 568 NPAYQAPELEYALKKVGCKALVFPKQFKTQQYYNILKQICPEVEKAKPGALKSQRLPDLT 747
++ Y L+ K +V +++ + I E K L S D
Sbjct: 145 TIQLTRKDILYRLQASKAKCIV-----ASEEVAPAVDSIVSECPSLKTKLLVSPHHWD-- 197
Query: 748 IVISVDTPLPGTLFLDDVVAAGNQEQHLAQLRHTQKFLSCHDPINIQFTSGTTGSPKGAT 927
G L +++ + ++E + + +P+ I FTSGTTGSPK A
Sbjct: 198 ----------GWLNFQELLQSASEEHNCVET-------GSQEPMAIYFTSGTTGSPKMAQ 240
Query: 928 LSHYNIVNNSNMIGERLQLSQKTAEKSRMVLPTP-LYHCLGSVGGTMVSLMHGVTLILSS 1104
S ++ + G R L +++ + T + +GSV T L +
Sbjct: 241 HSQGSLGIGYTLCG-RYWLDLTSSDIMWNMSDTGWIKAAIGSVFSTW--LRGACVFVHRM 297
Query: 1105 PVFDGKKALEAISRERGSFLYGTPTMFVDILNQPDFSSYDISAICGGVIAGSPVPPELIR 1284
FD L+ ++ + L PT++ +L Q D Y + + G P+ PE++
Sbjct: 298 AQFDTDIFLDTLTTYPITTLCSAPTVY-RMLVQKDLKRYQFKRLRHCLTGGEPLNPEVLE 356
Query: 1285 AIINKMNMKELVVAYGTTENSPVTFMNFPEDTMEQKAESVGRVMPHTEAQIMNMETRTLA 1464
+ + EL YG TE + E K S+G+ + + QI++ E +
Sbjct: 357 QWKMQTGL-ELYEGYGQTEVGIICANRKGEAI---KPGSMGKGVVPYDVQIID-ENGNIL 411
Query: 1465 ELNTPGELCIR-----GYCVMQGYWGDPQKTDEVIGQDKWYRTGDIAVMDEQGFCRIVGR 1629
GE+ +R +C Y +P+KTD I ++ +Y TGD VMD+ G+ VGR
Sbjct: 412 PSGKEGEIALRLKSDRPFCFFSEYVDNPEKTDATIRRN-FYVTGDRGVMDDDGYFWFVGR 470
Query: 1630 AKDMIIRGGENIYPAELEDFFHTHPXXXXXXXXXXKDNRMGEEICACI------RLKKGE 1791
A D+II G I P E+E HP D GE + A I + E
Sbjct: 471 ADDVIISSGYRIGPFEVESALIEHPAVVESAVVSSPDPIRGEVVKAFIVLAAPYKCSNRE 530
Query: 1792 KTTAEEIKAFCKGKISHFKIPRYIVFVTDYPLTVSGKVQKFKLREQ 1929
K TA E++ K + +K PR + FV + P T++GK+++ LR+Q
Sbjct: 531 KLTA-ELQDHVKNSTAPYKYPRKVEFVQELPKTITGKIKRNVLRDQ 575
>ref|NP_542142.1| acetyl-coenzyme A synthetase 2-like, mitochondrial precursor [Mus
musculus].
Length = 682
Score = 111 bits (278), Expect = 2e-24
Identities = 144/566 (25%), Positives = 226/566 (39%), Gaps = 30/566 (5%)
Frame = +1
Query: 334 CLDATAQKIPDKEALVVFHEN----IRLTFAQLKEQVDKAAAGLLSIGLRKGDRLGMWGP 501
CLD QK P+ AL+ + +R+T+ +L E + A L G+ +GDR+ ++ P
Sbjct: 107 CLDQHVQKSPETIALIWERDEPGTEVRITYRELLETTCRLANTLKRHGVHRGDRVAIYMP 166
Query: 502 NSYAWVLIQLATAQAGIILVSVNPAYQAPELEYALKKVGCKALVFPKQFKTQQYYNILKQ 681
S V LA A+ G I V + A L + CKA++ Q LK+
Sbjct: 167 VSPLAVAAMLACARIGAIHTVVFAGFSAESLAGRINDAKCKAVITFNQGLRGGRVVELKK 226
Query: 682 ICPEVEKAKP---GALKSQRLPDLTIVISVDTPLPGTLFLDDVVAAGNQEQHLAQLRHTQ 852
I E K+ P L + R + S+D PL + + V T
Sbjct: 227 IVDEAVKSCPTVQHVLVAHRTDTKVPMGSLDIPLEQEMAKEAPVC-------------TP 273
Query: 853 KFLSCHDPINIQFTSGTTGSPKGATLSHYNIVNNSNMIGERLQLSQKTAEKSRMVLPTPL 1032
+ +S D + + +TSG+TG+PKG + + + M + + Q P +
Sbjct: 274 ESMSSEDMLFMLYTSGSTGTPKGLVHTQAGYLLYAAMTHKLVFDYQ----------PGDV 323
Query: 1033 YHCLGSVGG-------TMVSLMHGVTLIL--SSPVF-DGKKALEAISRERGSFLYGTPTM 1182
+ C+ +G L +G T +L S+PV+ D + E + R + + YG PT
Sbjct: 324 FGCVADIGWITGHSYVVYGPLCNGATTVLFESTPVYPDAGRYWETVQRLKINQFYGAPTA 383
Query: 1183 FVDILNQPD--FSSYDISAICGGVIAGSPVPPEL---IRAIINKMNMKELVVAYGTTENS 1347
+L D YD S++ G P+ E + ++ LV + TE
Sbjct: 384 VRLLLKYGDAWVKKYDRSSLRTLGSVGEPINHEAWEWLHKVVGD-GRCTLVDTWWQTETG 442
Query: 1348 PVTFMNFP-EDTMEQKAESVGRVMPHTEAQIMNMETRTLAELNTPGELCIRGYC--VMQG 1518
+ P ED E R +M+ + L + G LCI + +
Sbjct: 443 GICIAPRPSEDGAEILPGMAMRPFFGIVPVLMDEKGNVLEGGDVSGALCISQAWPGMART 502
Query: 1519 YWGDPQKTDEVI--GQDKWYRTGDIAVMDEQGFCRIVGRAKDMIIRGGENIYPAELEDFF 1692
+GD Q+ + +Y TGD A E G+ +I GR D+I G + AE+ED
Sbjct: 503 IYGDHQRFVDAYFRAYPGYYFTGDGAHRTEGGYYQITGRMDDVINISGHRLGTAEIEDAM 562
Query: 1693 HTHPXXXXXXXXXXKDNRMGEEICACIRLK---KGEKTTAEEIKAFCKGKISHFKIPRYI 1863
HP + GE A I LK E E+K KI+ + +P I
Sbjct: 563 ADHPAVPETAVIGYPHDIKGEAAFAFIVLKDNISDENMVVNELKLSVATKIAKYAVPDQI 622
Query: 1864 VFVTDYPLTVSGKVQKFKLREQMEQR 1941
+ V P T SGKV + LR+ + R
Sbjct: 623 LVVKRLPKTRSGKVMRRLLRKIITSR 648
>ref|NP_001171448.1| acyl-coenzyme A synthetase ACSM2, mitochondrial isoform 1 [Mus
musculus].
Length = 600
Score = 109 bits (272), Expect = 9e-24
Identities = 124/526 (23%), Positives = 220/526 (41%), Gaps = 15/526 (2%)
Frame = +1
Query: 391 ENIRLTFAQLKEQVDKAAAGLLS--IGLRKGDRLGMWGPNSYAWVLIQLATAQAGIILVS 564
+ I+ +F +L E K A +LS GL +GDR+ + P W L+ L + G++ +
Sbjct: 102 KEIKWSFRELSE-ASKQTANVLSGACGLHRGDRVAVVLPRIPEWWLMILGCMRTGLVFMP 160
Query: 565 VNPAYQAPELEYALKKVGCKALVFPKQFKTQQYYNILKQICPEVEKAKPGALKSQRLPDL 744
++ ++ Y L+ +A+V + + + + P+ K L S+ +
Sbjct: 161 GTIQMRSSDILYRLQASKARAIVAGDEVAQE-----VDAVAPDCSFLKIKLLVSENSRE- 214
Query: 745 TIVISVDTPLPGTLFLDDVVAAGNQEQHLAQLRHTQKFLSCHDPINIQFTSGTTGSPKGA 924
G L + A + + Q T+ + I FTSGT+G PK A
Sbjct: 215 -----------GWL---NFKALLKEASTIHQCVETES----RESAAIYFTSGTSGPPKMA 256
Query: 925 TLSHYNIVNNSNMIGERLQLSQKTAEKSRMVLPT--PLYHCLGSVGGTMVSLMHGVTLIL 1098
SH ++ I ++ + T + ++ T + +G + + G + +
Sbjct: 257 EHSHCSLG-----IKAKMDAASWTGLSTSDIIWTISDTAWIMNILGAFLEPWVLGACIFV 311
Query: 1099 SS-PVFDGKKALEAISRERGSFLYGTPTMFVDILNQPDFSSYDISAICGGVIAGSPVPPE 1275
P FD + L+ +S + L G P ++ +L Q D SSY + G + PE
Sbjct: 312 HLLPKFDSQTVLKVLSSYPINTLVGAPIIYRMLLQQ-DLSSYKFPHLHSCFSGGETLLPE 370
Query: 1276 LIRAIINKMNMKELVVAYGTTENSPVTFMNFPEDTMEQKAESVGRVMPHTEAQIMNMETR 1455
+ K + E+ YG TE + ++ TM+ K +G H + Q+++ +
Sbjct: 371 TLENWKAKTGL-EIREIYGQTETGLICRVS---RTMKVKPGYLGTAFAHYDVQVIDEQGN 426
Query: 1456 TLAELNTPGELCIRGYCV-----MQGYWGDPQKTDEVIGQDKWYRTGDIAVMDEQGFCRI 1620
L G++ IR + GY +P+KT + I D W GD + D +G+
Sbjct: 427 VLPP-GKEGDIAIRVKPIWPIGMFSGYVDNPKKTQDNIRGDFWLM-GDRGIKDPEGYFHF 484
Query: 1621 VGRAKDMIIRGGENIYPAELEDFFHTHPXXXXXXXXXXKDNRMGEEICACI-----RLKK 1785
+GR+ D+I G I P+E+E+ HP D GE + A + L
Sbjct: 485 IGRSDDIINSSGYRIGPSEVENALMEHPAVSETAVISSPDPSRGEVVKAFVVLAPEFLSH 544
Query: 1786 GEKTTAEEIKAFCKGKISHFKIPRYIVFVTDYPLTVSGKVQKFKLR 1923
+ ++ K + +K PR + FV D P TV+GK+++ KLR
Sbjct: 545 DRDQLTKVLQEHVKSVTAPYKYPRKVEFVLDLPKTVTGKIERAKLR 590
>ref|NP_666309.1| acyl-coenzyme A synthetase ACSM2, mitochondrial isoform 3 [Mus
musculus].
Length = 575
Score = 109 bits (272), Expect = 9e-24
Identities = 124/526 (23%), Positives = 220/526 (41%), Gaps = 15/526 (2%)
Frame = +1
Query: 391 ENIRLTFAQLKEQVDKAAAGLLS--IGLRKGDRLGMWGPNSYAWVLIQLATAQAGIILVS 564
+ I+ +F +L E K A +LS GL +GDR+ + P W L+ L + G++ +
Sbjct: 77 KEIKWSFRELSE-ASKQTANVLSGACGLHRGDRVAVVLPRIPEWWLMILGCMRTGLVFMP 135
Query: 565 VNPAYQAPELEYALKKVGCKALVFPKQFKTQQYYNILKQICPEVEKAKPGALKSQRLPDL 744
++ ++ Y L+ +A+V + + + + P+ K L S+ +
Sbjct: 136 GTIQMRSSDILYRLQASKARAIVAGDEVAQE-----VDAVAPDCSFLKIKLLVSENSRE- 189
Query: 745 TIVISVDTPLPGTLFLDDVVAAGNQEQHLAQLRHTQKFLSCHDPINIQFTSGTTGSPKGA 924
G L + A + + Q T+ + I FTSGT+G PK A
Sbjct: 190 -----------GWL---NFKALLKEASTIHQCVETES----RESAAIYFTSGTSGPPKMA 231
Query: 925 TLSHYNIVNNSNMIGERLQLSQKTAEKSRMVLPT--PLYHCLGSVGGTMVSLMHGVTLIL 1098
SH ++ I ++ + T + ++ T + +G + + G + +
Sbjct: 232 EHSHCSLG-----IKAKMDAASWTGLSTSDIIWTISDTAWIMNILGAFLEPWVLGACIFV 286
Query: 1099 SS-PVFDGKKALEAISRERGSFLYGTPTMFVDILNQPDFSSYDISAICGGVIAGSPVPPE 1275
P FD + L+ +S + L G P ++ +L Q D SSY + G + PE
Sbjct: 287 HLLPKFDSQTVLKVLSSYPINTLVGAPIIYRMLLQQ-DLSSYKFPHLHSCFSGGETLLPE 345
Query: 1276 LIRAIINKMNMKELVVAYGTTENSPVTFMNFPEDTMEQKAESVGRVMPHTEAQIMNMETR 1455
+ K + E+ YG TE + ++ TM+ K +G H + Q+++ +
Sbjct: 346 TLENWKAKTGL-EIREIYGQTETGLICRVS---RTMKVKPGYLGTAFAHYDVQVIDEQGN 401
Query: 1456 TLAELNTPGELCIRGYCV-----MQGYWGDPQKTDEVIGQDKWYRTGDIAVMDEQGFCRI 1620
L G++ IR + GY +P+KT + I D W GD + D +G+
Sbjct: 402 VLPP-GKEGDIAIRVKPIWPIGMFSGYVDNPKKTQDNIRGDFWLM-GDRGIKDPEGYFHF 459
Query: 1621 VGRAKDMIIRGGENIYPAELEDFFHTHPXXXXXXXXXXKDNRMGEEICACI-----RLKK 1785
+GR+ D+I G I P+E+E+ HP D GE + A + L
Sbjct: 460 IGRSDDIINSSGYRIGPSEVENALMEHPAVSETAVISSPDPSRGEVVKAFVVLAPEFLSH 519
Query: 1786 GEKTTAEEIKAFCKGKISHFKIPRYIVFVTDYPLTVSGKVQKFKLR 1923
+ ++ K + +K PR + FV D P TV+GK+++ KLR
Sbjct: 520 DRDQLTKVLQEHVKSVTAPYKYPRKVEFVLDLPKTVTGKIERAKLR 565
>ref|NP_473435.1| acyl-coenzyme A synthetase ACSM1, mitochondrial [Mus musculus].
Length = 573
Score = 106 bits (265), Expect = 6e-23
Identities = 130/526 (24%), Positives = 224/526 (42%), Gaps = 13/526 (2%)
Frame = +1
Query: 391 ENIRLTFAQLKEQVDKAAAGLLSI-GLRKGDRLGMWGPNSYAWVLIQLATAQAGIILVSV 567
+ I+ +F +L++ + A I GL++GD L + P W L+ + + GII +
Sbjct: 78 DEIKWSFRKLRDLTCRTANVFEQICGLQQGDHLALILPRVPEWWLVTVGCMRTGIIFMPG 137
Query: 568 NPAYQAPELEYALKKVGCKALVFPKQFKTQQYYNILKQICPEVEKAKPGALKSQRLPDL- 744
+A ++ Y ++ KA+V + PEVE + PDL
Sbjct: 138 TTQLKAKDILYRIQISRAKAIV------------TTASLVPEVESV------ASECPDLK 179
Query: 745 TIVISVDTPLPGTLFLDDVVAAGNQEQHLAQLRHTQKFLSCHDPINIQFTSGTTGSPKGA 924
T ++ D G L ++ + + + HT DP+ I FTSGTTG PK A
Sbjct: 180 TKLVVSDHSHEGWLDFCSLIKSASPD-------HTCIKSKMKDPMAIFFTSGTTGYPKMA 232
Query: 925 TLSHYNIVNNSNMIGERLQLSQKTAEKSRMVLPTPLYHCLGSVGGTMVSLMHGVTLILSS 1104
+ + S + R L KT++ + P + L +VG + G T+ +
Sbjct: 233 K-HNQGLAFRSYIPSCRKLLKLKTSD-ILWCMSDPGW-ILATVGCLIEPWTSGCTVFIHH 289
Query: 1105 -PVFDGKKALEAISRERGSFLYGTPTMFVDILNQPDFSSYDISAICGGVIAGSPVPPELI 1281
P FD K +E + + + P ++ +L Q S+ + G + PE
Sbjct: 290 LPQFDPKVIVEVLFKYPITQCLAAPGVYRMVLQQKT-SNLRFPTLEHCTTGGESLLPEEY 348
Query: 1282 RAIINKMNMKELVVAYGTTENSPVTFMNFPEDTMEQKAESVGRVMPHTEAQIMNMETRTL 1461
+ + + YG +E ++ E M+ K S+G+ + + QI++ E +
Sbjct: 349 EQWKQRTGLS-IHEVYGQSETG-ISSATLRE--MKIKRGSIGKAILPFDLQIID-EKGNI 403
Query: 1462 AELNTPGELCIR-----GYCVMQGYWGDPQKTDEVIGQDKWYRTGDIAVMDEQGFCRIVG 1626
NT G + IR + Y P+ T EV D +Y +GD A +DE+G+ +G
Sbjct: 404 LPPNTEGYIGIRIKPTRPLGLFMEYENSPESTSEVECGD-FYNSGDRATIDEEGYIWFLG 462
Query: 1627 RAKDMIIRGGENIYPAELEDFFHTHPXXXXXXXXXXKDNRMGEEICACI-----RLKKGE 1791
R D+I G I P E+E+ HP D GE + A I L +
Sbjct: 463 RGDDVINASGYRIGPVEVENALAEHPAVAESAVVSSPDKDRGEVVKAFIVLNPEFLSHDQ 522
Query: 1792 KTTAEEIKAFCKGKISHFKIPRYIVFVTDYPLTVSGKVQKFKLREQ 1929
+ +E++ K + +K PR + FV++ P TV+GK+++ +LR +
Sbjct: 523 EQLIKELQHHVKSVTAPYKYPRKVEFVSELPKTVTGKIKRKELRNK 568
>ref|NP_659181.2| acyl-CoA synthetase family member 3, mitochondrial precursor [Mus
musculus].
Length = 583
Score = 106 bits (265), Expect = 6e-23
Identities = 100/388 (25%), Positives = 164/388 (42%), Gaps = 38/388 (9%)
Frame = +1
Query: 883 IQFTSGTTGSPKGATLSHYNIVNNSNMIGERLQLSQKTAEKSRMVLPTPLYHCLGSVGGT 1062
I +TSGTTG PKGA +H N+ + L S + ++ PL+H G V
Sbjct: 199 IFYTSGTTGRPKGALSTHRNLA----AVVTGLVHSWAWTKNDVILHVLPLHHVHGVVNKL 254
Query: 1063 MVSLMHGVTLILSSPVFDGKKALEAISRERG---SFLYGTPTMFVDILN-------QPDF 1212
+ L G T ++ P F ++ E + PT++ +L+ QP
Sbjct: 255 LCPLWVGATCVML-PEFSAQQVWEKFLSSEAPQITVFMAVPTVYSKLLDYYDKHFTQPHV 313
Query: 1213 SSYDISAICGG----VIAGSPVPPELIRAIINKMNMKELVVAYGTTE-----NSPVTFMN 1365
+ + A+C +++GS P + L+ YG TE ++P+T
Sbjct: 314 QDF-VRAVCKERIRLMVSGSAALPVPLLEKWRSATGHTLLERYGMTEIGMALSNPLTEAR 372
Query: 1366 FPEDTMEQKAESVGRVMPHTEAQIMNMETRT------LAELN------TPG------ELC 1491
P SVG +P E +I++ + AE N TPG EL
Sbjct: 373 VPG--------SVGTPLPGVEVRIISENPQKGSPYIIHAEGNERGTKVTPGFEEKEGELL 424
Query: 1492 IRGYCVMQGYWGDPQKTDEVIGQDKWYRTGDIAVMDEQGFCRIVGRAK-DMIIRGGENIY 1668
+RG V + YW P++T D W+RTGD AV + + I GR D+I GG +
Sbjct: 425 VRGPSVFREYWDKPEETKSAFTSDGWFRTGDTAVFKDARYW-IRGRTSVDIIKTGGYKVS 483
Query: 1669 PAELEDFFHTHPXXXXXXXXXXKDNRMGEEICACIRLKKGEKTTAEEIKAFCKGKISHFK 1848
E+E HP D G+ + A + L++G + ++K + +G ++ +
Sbjct: 484 ALEIERHLLAHPSITDVAVIGVPDMTWGQRVTAVVALQEGHSLSHGDLKEWARGVLAPYA 543
Query: 1849 IPRYIVFVTDYPLTVSGKVQKFKLREQM 1932
+P ++ V + P GKV K +L +Q+
Sbjct: 544 VPSELLLVEEIPRNQMGKVNKKELLKQL 571
>ref|NP_001171449.1| acyl-coenzyme A synthetase ACSM2, mitochondrial isoform 2 [Mus
musculus].
Length = 580
Score = 103 bits (257), Expect = 5e-22
Identities = 124/531 (23%), Positives = 220/531 (41%), Gaps = 20/531 (3%)
Frame = +1
Query: 391 ENIRLTFAQLKEQVDKAAAGLLS--IGLRKGDRLGMWGPNSYAWVLIQLATAQAGIILVS 564
+ I+ +F +L E K A +LS GL +GDR+ + P W L+ L + G++ +
Sbjct: 77 KEIKWSFRELSE-ASKQTANVLSGACGLHRGDRVAVVLPRIPEWWLMILGCMRTGLVFMP 135
Query: 565 VNPAYQAPELEYALKKVGCKALVFPKQFKTQQYYNILKQICPEVEKAKPGALKSQRLPDL 744
++ ++ Y L+ +A+V + + + + P+ K L S+ +
Sbjct: 136 GTIQMRSSDILYRLQASKARAIVAGDEVAQE-----VDAVAPDCSFLKIKLLVSENSRE- 189
Query: 745 TIVISVDTPLPGTLFLDDVVAAGNQEQHLAQLRHTQKFLSCHDPINIQFTSGTTGSPKGA 924
G L + A + + Q T+ + I FTSGT+G PK A
Sbjct: 190 -----------GWL---NFKALLKEASTIHQCVETES----RESAAIYFTSGTSGPPKMA 231
Query: 925 TLSHYNIVNNSNMIGERLQLSQKTAEKSRMVLPT--PLYHCLGSVGGTMVSLMHGVTLIL 1098
SH ++ I ++ + T + ++ T + +G + + G + +
Sbjct: 232 EHSHCSLG-----IKAKMDAASWTGLSTSDIIWTISDTAWIMNILGAFLEPWVLGACIFV 286
Query: 1099 SS-PVFDGKKALEAISRERGSFLYGTPTMFVDILNQPDFSSYDISAICGGVIAGSPVPPE 1275
P FD + L+ +S + L G P ++ +L Q D SSY + G + PE
Sbjct: 287 HLLPKFDSQTVLKVLSSYPINTLVGAPIIYRMLLQQ-DLSSYKFPHLHSCFSGGETLLPE 345
Query: 1276 LIRAIINKMNMKELVVAYGTTENSPVTFMNFPEDTMEQKAESVGRVMPHTEAQIMNMETR 1455
+ K + E+ YG TE + ++ TM+ K +G H + Q+++ +
Sbjct: 346 TLENWKAKTGL-EIREIYGQTETGLICRVS---RTMKVKPGYLGTAFAHYDVQVIDEQGN 401
Query: 1456 TLAELNTPGELCIRGYCV-----MQGYWGDPQKTDEVIGQDKWYRTGDIAVMDEQGFCRI 1620
L G++ IR + GY +P+KT + I D W GD + D +G+
Sbjct: 402 VLPP-GKEGDIAIRVKPIWPIGMFSGYVDNPKKTQDNIRGDFWLM-GDRGIKDPEGYFHF 459
Query: 1621 VGRAKDMIIRGGE-----NIYPAELEDFFHTHPXXXXXXXXXXKDNRMGEEICACIRL-- 1779
+GR+ D+I G I P+E+E+ HP D GE + A + L
Sbjct: 460 IGRSDDIINSSGAYFCRYRIGPSEVENALMEHPAVSETAVISSPDPSRGEVVKAFVVLAP 519
Query: 1780 ---KKGEKTTAEEIKAFCKGKISHFKIPRYIVFVTDYPLTVSGKVQKFKLR 1923
+ ++ K + +K PR + FV D P TV+GK+++ KLR
Sbjct: 520 EFLSHDRDQLTKVLQEHVKSVTAPYKYPRKVEFVLDLPKTVTGKIERAKLR 570
>ref|NP_997607.2| acyl-coenzyme A synthetase ACSM3, mitochondrial [Mus musculus].
Length = 580
Score = 101 bits (252), Expect = 2e-21
Identities = 130/526 (24%), Positives = 217/526 (41%), Gaps = 13/526 (2%)
Frame = +1
Query: 391 ENIRLTFAQLKEQVDKAAAGLL-SIGLRKGDRLGMWGPNSYAWVLIQLATAQAGIILVSV 567
E +R +F +L K A L + L++GDR+ + P W L +A + G +L+
Sbjct: 85 EELRWSFEELGLLSRKFANILTEACSLQRGDRVMVILPKIPEWWLANVACLRTGTVLIPG 144
Query: 568 NPAYQAPELEYALKKVGCKALVFPKQFKTQQYYNILKQICPEVEKAKPGALKSQRLPDLT 747
++ Y L+ K ++ + P V+ A K + L
Sbjct: 145 TTQLTQKDILYRLQSSKAKCIITDDT------------LAPAVDAV---AAKCENLHSKL 189
Query: 748 IVISVDTPLPGTLFLDDVVAAGNQEQHLAQLRHTQKFLSCHDPINIQFTSGTTGSPKGAT 927
IV G L + A HT + + I FTSGTTG PK
Sbjct: 190 IVSQHSREGWGNL---------KEMMKYASDSHTCVDTKHDEMMAIYFTSGTTGPPKMIG 240
Query: 928 LSHYNIVNNSNMIGERLQLSQKTAEKSRMVLPTPLYHCLGSVGGTMVSLMHGVTLILSS- 1104
+H + ++ G R L ++ ++ T S ++ S + +
Sbjct: 241 HTHSSFGLGLSVNG-RFWLDLIASD---VMWNTSDTGWAKSAWSSVFSPWTQGACVFAHY 296
Query: 1105 -PVFDGKKALEAISRERGSFLYGTPTMFVDILNQPDFSSYDISAICGGVIAGSPVPPELI 1281
P F+ L+ +S+ + PT + +L Q D SSY +++ V AG P+ PE++
Sbjct: 297 LPRFESTSILQTLSKFPITVFCSAPTAY-RMLVQNDMSSYKFNSLKHCVSAGEPINPEVM 355
Query: 1282 RAIINKMNMKELVVAYGTTENSPVTFMNFPEDTMEQKAESVGRVMPHTEAQIMNMETRTL 1461
K + ++ YG TE + NF M+ K S+G+ P + +I++ TL
Sbjct: 356 EQWRKKTGL-DIYEGYGQTETVLICG-NFKG--MKIKPGSMGKPSPAFDVKILDENGATL 411
Query: 1462 AELNTPGELCI-----RGYCVMQGYWGDPQKTDEVIGQDKWYRTGDIAVMDEQGFCRIVG 1626
G++ + R + + Y +P KT + + +Y TGD MDE G+ V
Sbjct: 412 PP-GQEGDIALQVLPERPFGLFTHYVDNPSKTASTL-RGSFYITGDRGYMDEDGYFWFVA 469
Query: 1627 RAKDMIIRGGENIYPAELEDFFHTHPXXXXXXXXXXKDNRMGEEICACIRLKKGEKT--- 1797
R+ D+I+ G I P E+E HP D GE + A I L K+
Sbjct: 470 RSDDIILSSGYRIGPFEVESALIEHPSIAESAVVSSPDPIRGEVVKAFIVLNPDYKSHDQ 529
Query: 1798 --TAEEIKAFCKGKISHFKIPRYIVFVTDYPLTVSGKVQKFKLREQ 1929
+EI+ K + +K PR + F+ + P TVSGKV++ +LR++
Sbjct: 530 EQLKKEIQEHVKKTTAPYKYPRKVEFIEELPKTVSGKVKRNELRKK 575
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 74,979,343
Number of extensions: 2302983
Number of successful extensions: 10278
Number of sequences better than 1.0e-05: 25
Number of HSP's gapped: 10137
Number of HSP's successfully gapped: 28
Length of query: 689
Length of database: 15,617,559
Length adjustment: 108
Effective length of query: 581
Effective length of database: 12,373,671
Effective search space: 7189102851
Effective search space used: 7189102851
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002234
(2067 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_003131621.2| PREDICTED: acyl-CoA synthetase family member... 387 e-107
Alignment gi|NP_001229951.1| acyl-CoA synthetase medium-chain family memb... 121 2e-27
Alignment gi|XP_003124609.2| PREDICTED: acyl-coenzyme A synthetase ACSM2B... 115 1e-25
Alignment gi|XP_001927148.2| PREDICTED: acetyl-coenzyme A synthetase 2-li... 111 1e-24
Alignment gi|XP_003124611.2| PREDICTED: acyl-coenzyme A synthetase ACSM5,... 94 2e-19
Alignment gi|XP_003124616.2| PREDICTED: acyl-coenzyme A synthetase ACSM3,... 94 2e-19
Alignment gi|NP_001161101.2| long-chain-fatty-acid--CoA ligase 1 [Sus scr... 86 6e-17
Alignment gi|XP_003359417.1| PREDICTED: long-chain-fatty-acid--CoA ligase... 85 1e-16
Alignment gi|NP_001182250.1| long-chain-fatty-acid--CoA ligase 5 [Sus scr... 84 2e-16
Alignment gi|XP_003123156.2| PREDICTED: long-chain-fatty-acid--CoA ligase... 80 3e-15
>ref|XP_003131621.2| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial-like
[Sus scrofa].
Length = 197
Score = 387 bits (995), Expect = e-107
Identities = 187/197 (94%), Positives = 187/197 (94%)
Frame = +1
Query: 1360 MNFPEDTMEQKAESVGRVMPHTEAQIMNMETRTLAELNTPGELCIRGYCVMQGYWGDPQK 1539
MNFPEDTMEQKAESVGRVMPHTEAQIMNMETRTLAELNTPGELCIRGYCVMQGYWGDPQK
Sbjct: 1 MNFPEDTMEQKAESVGRVMPHTEAQIMNMETRTLAELNTPGELCIRGYCVMQGYWGDPQK 60
Query: 1540 TDEVIGQDKWYRTGDIAVMDEQGFCRIVGRAKDMIIRGGENIYPAELEDFFHTHPXXXXX 1719
TDEVIGQDKWYRTGDIAVMDEQGFCRIVGRAKDMIIRGGENIYPAELEDFFHTHP
Sbjct: 61 TDEVIGQDKWYRTGDIAVMDEQGFCRIVGRAKDMIIRGGENIYPAELEDFFHTHPQVQDV 120
Query: 1720 XXXXXKDNRMGEEICACIRLKKGEKTTAEEIKAFCKGKISHFKIPRYIVFVTDYPLTVSG 1899
KDNRMGEEICACIRLKKGEKTTAEEIKAFCKGKISHFKIPRYIVFVTDYPLTVSG
Sbjct: 121 QVVGVKDNRMGEEICACIRLKKGEKTTAEEIKAFCKGKISHFKIPRYIVFVTDYPLTVSG 180
Query: 1900 KVQKFKLREQMEQRLNL 1950
KVQKFKLREQMEQRLNL
Sbjct: 181 KVQKFKLREQMEQRLNL 197
>ref|NP_001229951.1| acyl-CoA synthetase medium-chain family member 4 [Sus scrofa].
Length = 580
Score = 121 bits (303), Expect = 2e-27
Identities = 139/524 (26%), Positives = 221/524 (42%), Gaps = 13/524 (2%)
Frame = +1
Query: 397 IRLTFAQLKEQVDKAAAGLL-SIGLRKGDRLGMWGPNSYAWVLIQLATAQAGIILVSVNP 573
++ +F +L KAA L S GL +GDR+ M P W L+ +A + G++ +
Sbjct: 87 VKWSFRELGSLSRKAANVLTKSCGLERGDRVAMILPRIPEWWLLNVACMRTGLVFMPGTT 146
Query: 574 AYQAPELEYALKKVGCKALVFPKQFKTQQYYNILKQICPEVEKAKPGALKSQRLPDLTIV 753
A +L Y L+ K +V + + P VE A + PDL
Sbjct: 147 QLTAKDLLYRLRASKAKCIVASDE------------VVPAVESA------ASECPDLKTK 188
Query: 754 ISVDT-PLPGTLFLDDVVAAGNQEQHLAQLRHTQKFLSCHDPINIQFTSGTTGSPKGATL 930
+ V G L ++ + E H+ + + I FTSGT+GSPK A
Sbjct: 189 LLVSPHSRNGWLSFQELFQNASTE-------HSCVETGSQESMAIFFTSGTSGSPKMAQH 241
Query: 931 SHYNIVNNSNMIGERLQLSQKTAEKSRMVLPTP-LYHCLGSVGGTMVSLMHGVTLILSSP 1107
S ++ S G R K+++ + T + LGS+ LM +
Sbjct: 242 SQSSLGIGSTHCG-RHWFDLKSSDTMWNISDTGWIKASLGSLFSPW--LMGSCVFVHRMA 298
Query: 1108 VFDGKKALEAISRERGSFLYGTPTMFVDILNQPDFSSYDISAICGGVIAGSPVPPELIRA 1287
FD L+ ++ + L G PT++ +L Q D Y ++ + G P+ PE++
Sbjct: 299 QFDTDTVLDVLATYPITTLCGPPTVY-RMLVQKDLRRYKFKSLKHCLTGGEPLNPEVLEQ 357
Query: 1288 IINKMNMKELVVAYGTTENSPVTFMNFPEDTMEQKAESVGRVMPHTEAQIMNMETRTLAE 1467
+ + L YG TE V + E K S+G P + QI++ E +
Sbjct: 358 WRAQTGLN-LYEGYGQTE---VGLICASYKGQEIKPGSMGIRAPPHDVQIID-ENGDVLP 412
Query: 1468 LNTPGELCIR-----GYCVMQGYWGDPQKTDEVIGQDKWYRTGDIAVMDEQGFCRIVGRA 1632
GE+ IR + + Y +P+KT I + +Y TGD VMD G+ R VGRA
Sbjct: 413 PGKEGEISIRLTPTRHFSLFSKYVDNPEKTAATI-RGGFYVTGDRGVMDSDGYFRFVGRA 471
Query: 1633 KDMIIRGGENIYPAELEDFFHTHPXXXXXXXXXXKDNRMGEEICACIRLKKGEKTT---- 1800
D+II G I P E+E HP D GE + A + L K++
Sbjct: 472 DDVIISAGYRIGPFEVESALIEHPAVAESAVVSSPDPIRGEVVKAFVVLSAPFKSSNPEQ 531
Query: 1801 -AEEIKAFCKGKISHFKIPRYIVFVTDYPLTVSGKVQKFKLREQ 1929
E++ K + +K PR + FV + P TV+GK+++ LR++
Sbjct: 532 LTLELQDHVKKSTAPYKYPRKVEFVQELPKTVTGKIKRNILRDR 575
>ref|XP_003124609.2| PREDICTED: acyl-coenzyme A synthetase ACSM2B, mitochondrial [Sus
scrofa].
Length = 587
Score = 115 bits (287), Expect = 1e-25
Identities = 131/534 (24%), Positives = 221/534 (41%), Gaps = 19/534 (3%)
Frame = +1
Query: 397 IRLTFAQLKEQVDKAAAGLLSI-GLRKGDRLGMWGPNSYAWVLIQLATAQAGIILVSVNP 573
++ +F +L EQ KAA L + GL+ GDR+ + P W L+ +A + G +++
Sbjct: 88 VQWSFEELGEQSRKAANVLGGMCGLQPGDRMMLVLPRLPEWWLVSVACMRTGAVMIPGIS 147
Query: 574 AYQAPELEYALKKVGCKALVFPKQFKTQQYYNILKQICPEVEKAKPGALKSQRLPDLTIV 753
+L++ L+ K+++ + + + CP ++ T +
Sbjct: 148 QLTEKDLKFRLQASRAKSIITSDSLAPR--VDAISADCPSLQ---------------TKL 190
Query: 754 ISVDTPLPGTLFLDDVVAAGNQEQHLAQLRHTQKFLSCHDPINIQFTSGTTGSPKGATLS 933
+ D+ PG + ++ A H + I FTSGT+G PK A S
Sbjct: 191 LVSDSSRPGWMNFRQLLRE-------ASTTHCCMETGSQESAAIYFTSGTSGLPKMAEHS 243
Query: 934 HYNIVNNSNMIGERLQLSQKTAEKSRMVLPTPLYHCLGSVGGTMVSLMH--------GVT 1089
H ++ + M A K + T + + G + L T
Sbjct: 244 HASLGIKAKM----------DAGKWTDLQATDIIWTISDTGWILNMLSSFLEPWTSGACT 293
Query: 1090 LILSSPVFDGKKALEAISRERGSFLYGTPTMFVDILNQPDFSSYDISAICGGVIAGSPVP 1269
I P FD L+ +S + + G P ++ +L Q D SSY + G +
Sbjct: 294 FIHHLPTFDPLVILKVLSSYPINSMVGAPIVYRMLLLQ-DLSSYKFPHLKYCFTGGETLL 352
Query: 1270 PELIRAIINKMNMKELVVAYGTTENSPVTFMNFPEDTMEQKAESVGRVMPHTEAQIMNME 1449
P+ + + + +L YG TE ++ TM+ K +G +PH + Q+++ +
Sbjct: 353 PDTLENWRAQTGL-DLREFYGQTETGLTCRVS---KTMKVKPGHLGTAIPHYDVQVIDDK 408
Query: 1450 TRTLAELNTPGELCIRGYCV-----MQGYWGDPQKTDEVIGQDKWYRTGDIAVMDEQGFC 1614
L T GEL IR + GY + +KT I D W TGD + D+ G+
Sbjct: 409 GNVLPP-GTEGELGIRVKPIRPVGFFSGYVDNLEKTIANIRGDFWL-TGDRGIKDQDGYF 466
Query: 1615 RIVGRAKDMIIRGGENIYPAELEDFFHTHPXXXXXXXXXXKDNRMGEEICACI-----RL 1779
+ +GRA D+I G I P+E+E+ HP D GE + A + L
Sbjct: 467 QFLGRADDIINSSGYRIGPSEVENALMEHPAVVETAVISSPDPIRGEVVKAFVVLDPQFL 526
Query: 1780 KKGEKTTAEEIKAFCKGKISHFKIPRYIVFVTDYPLTVSGKVQKFKLREQMEQR 1941
+E++ K + +K PR I FV D P TV+GK+Q+ KLR++ +R
Sbjct: 527 SHDLDQLTKELQQHVKLVTAPYKYPRKIEFVLDLPKTVTGKIQRAKLRDKEWKR 580
>ref|XP_001927148.2| PREDICTED: acetyl-coenzyme A synthetase 2-like, mitochondrial-like
[Sus scrofa].
Length = 672
Score = 111 bits (278), Expect = 1e-24
Identities = 134/561 (23%), Positives = 228/561 (40%), Gaps = 30/561 (5%)
Frame = +1
Query: 334 CLDATAQKIPDKEALVVFHEN----IRLTFAQLKEQVDKAAAGLLSIGLRKGDRLGMWGP 501
CLD QK P+ AL+ + +R+T+ +L E + A L G+ +GDR+ ++ P
Sbjct: 98 CLDQHVQKSPESVALIWERDEPGTAVRITYRELLETTCRLANTLKRHGVCRGDRVAIYMP 157
Query: 502 NSYAWVLIQLATAQAGIILVSVNPAYQAPELEYALKKVGCKALVFPKQFKTQQYYNILKQ 681
S V LA A+ G + + + A L + CK L+ Q LK+
Sbjct: 158 VSPMAVAAMLACARIGAVHTVIFAGFSAGSLAGRINDAKCKVLITFNQGLRGGRVVELKR 217
Query: 682 ICPEVEKAKPG---ALKSQRLPDLTIVISVDTPLPGTLFLDDVVAAGNQEQHLAQLRHTQ 852
I E K P L + R + + ++D PL + ++ V A
Sbjct: 218 IVDEAVKLCPSIQHVLVAHRTDNKVPMGNLDIPLEQEMAKEEPVCA-------------P 264
Query: 853 KFLSCHDPINIQFTSGTTGSPKGATLSHYNIVNNSNMIGERLQLSQKTAEKSRMVLPTPL 1032
+ + D + + +TSG+TG PKG + + + + RL + P +
Sbjct: 265 ESMGSEDTLFLLYTSGSTGKPKGLVHTQAGYLLYA-ALTHRLVFDYR---------PGDI 314
Query: 1033 YHCLGSVGG-------TMVSLMHGVTLIL--SSPVF-DGKKALEAISRERGSFLYGTPTM 1182
+ C+ +G L +G T +L S+PV+ D + E + R + + YG PT
Sbjct: 315 FGCMADIGWITGHSYVVYGPLCNGATSVLFESTPVYPDAGRYWETVQRLKINQFYGAPTA 374
Query: 1183 FVDILNQPD--FSSYDISAICGGVIAGSPVPPEL---IRAIINKMNMKELVVAYGTTENS 1347
F +L D YD S++ G P+ E + ++ LV + TE
Sbjct: 375 FRLLLKYSDSWVKKYDRSSLRTLGSVGEPINHEAWEWLHQVVGD-GRCTLVDTWWQTETG 433
Query: 1348 PVTFMNFPEDTMEQKAESVG-RVMPHTEAQIMNMETRTLAELNTPGELCIRGYC--VMQG 1518
+ P + + R + +M+ + + L + G LC+ + +
Sbjct: 434 GICISPRPSEEGANILPCMAMRPLFGIVPVLMDEKGKVLEGGDVSGALCLSQAWPGMART 493
Query: 1519 YWGDPQKTDEVIGQ--DKWYRTGDIAVMDEQGFCRIVGRAKDMIIRGGENIYPAELEDFF 1692
+GD Q+ + + +Y TGD A E+G+ +I GR D+I G + AE+ED
Sbjct: 494 IYGDHQRFIDAYFKAFPGYYFTGDGAYRTEEGYYQITGRMDDVINISGHRLGTAEIEDAM 553
Query: 1693 HTHPXXXXXXXXXXKDNRMGEEICACIRLKKGE---KTTAEEIKAFCKGKISHFKIPRYI 1863
HP + GE A I LK G +E+++ KI+ + +P +
Sbjct: 554 ADHPAVPETAVIGYPHDIKGEAAFAFIVLKDGTGDVDVVVKELRSVVADKIAKYAVPDQV 613
Query: 1864 VFVTDYPLTVSGKVQKFKLRE 1926
+ V P T SGKV + LR+
Sbjct: 614 LVVKRLPKTRSGKVMRRLLRK 634
>ref|XP_003124611.2| PREDICTED: acyl-coenzyme A synthetase ACSM5, mitochondrial [Sus
scrofa].
Length = 440
Score = 94.4 bits (233), Expect = 2e-19
Identities = 103/381 (27%), Positives = 159/381 (41%), Gaps = 11/381 (2%)
Frame = +1
Query: 832 AQLRHTQKFLSCHDPINIQFTSGTTGSPKGATLSHYNIVNNSNMIGERLQLSQKTAEKSR 1011
A H+ DP+ I FTSGTTG+PK + H + + T +S
Sbjct: 71 ASSEHSCARTKSQDPLAIYFTSGTTGAPK--MVEHTQASYGLGFVASGRRWVALT--ESD 126
Query: 1012 MVLPTPLYHCLGSVGGTMVSLMHGVTLILSS-PVFDGKKALEAISRERGSFLYGTPTMFV 1188
+ T + + + +G + + P D K L +S + PT+F
Sbjct: 127 IFWNTTDTGWVKAAWTLFSAWPNGSCIFVHELPRVDAKVILNTLSSFPITTFCCIPTIF- 185
Query: 1189 DILNQPDFSSYDISAICGGVIAGSPVPPELIRAIINKMNMKELVVAYGTTENSPVTFMNF 1368
+L Q D + Y ++ + G + P+ +R EL YG +E V
Sbjct: 186 RLLVQEDLTRYQFQSLKHCLTGGEALNPD-VRGKWKSQTGLELHEGYGQSET--VVICAN 242
Query: 1369 PEDTMEQKAESVGRVMPHTEAQIMNMETRTLAELNTPGELCIR-----GYCVMQGYWGDP 1533
P+ + + KA S+G+ P E QI++ E L G + IR +C + Y +P
Sbjct: 243 PKGS-KIKAGSMGQASPPYEVQIVDDEGNVLPP-GEEGNIAIRVRPARPFCFFRCYLDNP 300
Query: 1534 QKTDEVIGQDKWYRTGDIAVMDEQGFCRIVGRAKDMIIRGGENIYPAELEDFFHTHPXXX 1713
+KT D +Y TGD A +D+ G+ +GR D+I I P E+E HP
Sbjct: 301 EKTAASERGD-FYITGDRAHIDKDGYFWFMGRNDDVINSSSYRIGPVEVESALAEHPAVL 359
Query: 1714 XXXXXXXKDNRMGEEICACIRLKKG-----EKTTAEEIKAFCKGKISHFKIPRYIVFVTD 1878
D GE + A I L K E++ K + +K PR + FV++
Sbjct: 360 EAAVVSSPDPIRGEVVKAFIVLSPAYTSHDPKKLTWELQEHVKRVTAPYKYPRKVAFVSE 419
Query: 1879 YPLTVSGKVQKFKLREQMEQR 1941
P TVSGK+Q+ KLR Q +R
Sbjct: 420 LPKTVSGKIQRSKLRSQEWRR 440
>ref|XP_003124616.2| PREDICTED: acyl-coenzyme A synthetase ACSM3, mitochondrial-like [Sus
scrofa].
Length = 581
Score = 94.4 bits (233), Expect = 2e-19
Identities = 121/526 (23%), Positives = 219/526 (41%), Gaps = 13/526 (2%)
Frame = +1
Query: 391 ENIRLTFAQLKEQVDKAAAGLLSIG--LRKGDRLGMWGPNSYAWVLIQLATAQAGIILVS 564
+ +R +F +L + + A +L+ G L++GDR+ + P W L +A + G +L+
Sbjct: 85 KEVRWSFEELGS-LSRKFANILTEGCALQRGDRVILILPRIPEWWLANVACLRTGTVLIP 143
Query: 565 VNPAYQAPELEYALKKVGCKALVFPKQFKTQQYYNILKQICPEVEKAKPGALKSQRLPDL 744
++ Y L+ +V + + P V+ A K + L
Sbjct: 144 GTTQLTQKDILYRLQTSKANCIVTDEI------------LAPAVDAI---ASKCENLHSK 188
Query: 745 TIVISVDTPLPGTLFLDDVVAAGNQEQHLAQLRHTQKFLSCHDPINIQFTSGTTGSPKGA 924
IV + P G L +++ + + + +H ++ + I FTSGT+G PK
Sbjct: 189 IIVS--EKPRKGWKNLKEMMKHASDKHTCVKTKH-------NEIMAIFFTSGTSGPPKMT 239
Query: 925 TLSHYNIVNNSNMIGERLQLSQKTAEKSRMVLPTPLYHCLGSVGGTMVSLMHGVTLILSS 1104
+H + ++ G R L ++ T S G + +
Sbjct: 240 GHTHSSFGLGLSING-RFWLDLTPSDVMWNASDTGWAKSAWS--SVFAPWTQGACVFVHF 296
Query: 1105 -PVFDGKKALEAISRERGSFLYGTPTMFVDILNQPDFSSYDISAICGGVIAGSPVPPELI 1281
P F+ L+ +S+ + PT + ++ + ++ V AG P+ PE+
Sbjct: 297 LPRFEPTSILQTLSKFPITVFCSAPTAYRMLVQNDKTRNCKFKSLKHCVSAGEPINPEVT 356
Query: 1282 RAIINKMNMKELVVAYGTTENSPVTFMNFPEDTMEQKAESVGRVMPHTEAQIMNMETRTL 1461
N + ++ YG TE + NF M+ K S+G+ P + +I+++ L
Sbjct: 357 EQWRNLTGL-DIYEGYGQTETVLICG-NFKG--MKIKPGSMGKPSPAFDVKILDVNGNVL 412
Query: 1462 AELNTPGELCIR-----GYCVMQGYWGDPQKTDEVIGQDKWYRTGDIAVMDEQGFCRIVG 1626
G++ IR + + Y +P KT + D +Y TGD MDE G+ V
Sbjct: 413 PP-GQEGDIGIRVSPNRPFGLFTHYIDNPTKTASTLRGD-FYITGDRGYMDEDGYFWFVA 470
Query: 1627 RAKDMIIRGGENIYPAELEDFFHTHPXXXXXXXXXXKDNRMGEEICACIRLKKGEKT--- 1797
R+ D+I+ G I P+E+E+ HP D GE + A I L K+
Sbjct: 471 RSDDIILSSGYRIGPSEVENALIEHPAVEESAVISSPDPVRGEVVKAFIVLNPDYKSHDQ 530
Query: 1798 --TAEEIKAFCKGKISHFKIPRYIVFVTDYPLTVSGKVQKFKLREQ 1929
+EI+ K + +K PR I F+ + P T+SGK+++ +LR++
Sbjct: 531 EQLKKEIQEHVKRTTAPYKYPRKIEFIQELPKTISGKIKRNELRKK 576
>ref|NP_001161101.2| long-chain-fatty-acid--CoA ligase 1 [Sus scrofa].
Length = 699
Score = 86.3 bits (212), Expect = 6e-17
Identities = 110/484 (22%), Positives = 190/484 (39%), Gaps = 54/484 (11%)
Frame = +1
Query: 403 LTFAQLKEQVDKAAAGLLSIGLRKGDR--LGMWGPNSYAWVLIQLATAQAGIILVSVNPA 576
L++ Q+++ + + L+ G + G +G++ N WV+I+ +++V +
Sbjct: 122 LSYKQVEDMSECVGSALIHKGFKAGPENFVGIFAQNRPEWVIIEQGCFAYSMVVVPLYDT 181
Query: 577 YQAPELEYALKKVGCKALVFPKQFKTQQYYNILKQICPEVEKAKPGALKSQRLPDLTIVI 756
+ Y + K G +LVF + PE ++++ +P L +I
Sbjct: 182 LGTEAITYIINK-GELSLVFVDK--------------PEKANLLLEGVENKLIPGLKTII 226
Query: 757 SVDTPLPGTLFLDDVVAAGNQEQHLAQL-------RHTQKFLSCHDPINIQFTSGTTGSP 915
+D+ G L+ G + + L R K + D I FTSGTTG+P
Sbjct: 227 LMDSY--GIDLLERGKKCGVEIMSMKALEDLGRANRRKPKPPAPEDLAVICFTSGTTGNP 284
Query: 916 KGATLSHYNIVNNSNMIGERLQLSQKTAEKSRMVLPTPLYH-------CLGSVGGTMVSL 1074
KGA ++H N+V++ + + + + ++ PL H C+ G +
Sbjct: 285 KGAMITHRNVVSDCSAFVKVTDKTFSPSSDDTLISFLPLAHMFERVVECVMLCHGAKIGF 344
Query: 1075 MHGVTLILSSPVFDGKKALEAISRERGSFLYGTPTMFVDILNQP---------DFSS--- 1218
G +L D KAL+ L MF I Q DF+S
Sbjct: 345 FQGDIRLL----MDDLKALQPTIFPVVPRLLNR--MFDRIFGQANTTLKRWLLDFASKRK 398
Query: 1219 --------------------YDISAICGG-----VIAGSPVPPELIRAIINKMNMKELVV 1323
+ I + GG V +PV ++ + + +
Sbjct: 399 EAELRSGIIRNNSLWDKLIFHKIQSSLGGKVRLMVTGAAPVSATVLTFLRAALGC-QFYE 457
Query: 1324 AYGTTENSPVTFMNFPEDTMEQKAESVGRVMPHTEAQIMNMETRTLAELNTPGELCIRGY 1503
YG TE + + P D A VG MP + +++++E GE+C++G
Sbjct: 458 GYGQTECTAGCSLTVPGDWT---AGHVGAPMPCSLIKLVDVEEMNYLAAKGEGEVCVKGP 514
Query: 1504 CVMQGYWGDPQKTDEVIGQDKWYRTGDIAVMDEQGFCRIVGRAKDMI-IRGGENIYPAEL 1680
V QGY DP KT E + +D W TGDI G +I+ R K + + GE I P ++
Sbjct: 515 NVFQGYLKDPAKTAEALDKDGWLHTGDIGKWLPNGTLKIIDRKKHIFKLAQGEYIAPEKI 574
Query: 1681 EDFF 1692
E+ +
Sbjct: 575 ENIY 578
>ref|XP_003359417.1| PREDICTED: long-chain-fatty-acid--CoA ligase 5-like [Sus scrofa].
Length = 683
Score = 85.1 bits (209), Expect = 1e-16
Identities = 105/484 (21%), Positives = 188/484 (38%), Gaps = 54/484 (11%)
Frame = +1
Query: 403 LTFAQLKEQVDKAAAGLLSIGLRKG--DRLGMWGPNSYAWVLIQLATAQAGIILVSVNPA 576
L++ Q+ ++ + + LL G + + +G++ N W++ + A ++ V +
Sbjct: 106 LSYKQVSDRAEYLGSFLLHKGYKPSPDELIGIFAQNRPEWIISEYACYTYSMVAVPLYET 165
Query: 577 YQAPELEYALKKVGCKALVFPKQFKTQQYYNILKQICPEVEKAKPGALKSQR--LPDLTI 750
A ++Y + K I IC + EKA ++ +P L +
Sbjct: 166 LGAEAIKYIINKA-----------------EIATVICDKPEKALILIKDMEKGLIPSLKM 208
Query: 751 VISVDTPLPGTLFLDDVVAAGNQEQ-HLAQLRHTQKF----------LSCHDPINIQFTS 897
+I +D F DD+ G + + + L + S D + FTS
Sbjct: 209 IIIMDP------FEDDLKERGEKSRIEILSLLDAENIGKENFRKPVPPSPEDLSIVCFTS 262
Query: 898 GTTGSPKGATLSHYNIVNNSNMIGERLQLSQKTAEKSRMVLPTPLYHCLGSVG------- 1056
GTTG PKGA ++H NIV+N +RL+ + + + + PL H +
Sbjct: 263 GTTGDPKGAMITHQNIVSNVASFLKRLEYTFQPTPEDVSISYLPLAHMFDRIVQAIMFSC 322
Query: 1057 GTMVSLMHGVTLILSSPVFDGKKALEAISRERGSFLY------GTPTMFVDILNQPDFSS 1218
G V G +L + K L + + +Y + +LN S
Sbjct: 323 GARVGFFQGDIQLLPDDMKTLKPTLFPVVPRLLNKIYDKVQSEAKSPLKKFLLNLAIASK 382
Query: 1219 YD--------------------ISAICGG-----VIAGSPVPPELIRAIINKMNMKELVV 1323
++ I GG + A +PV ++ M +
Sbjct: 383 FNEVKRGVIRRDSFWDKLIFAKIQESLGGRIHFMITAAAPVSSPVLMFFRAAMGCP-VFE 441
Query: 1324 AYGTTENSPVTFMNFPEDTMEQKAESVGRVMPHTEAQIMNMETRTLAELNTPGELCIRGY 1503
AYG TE + + P D + VG + ++ ++ +N GE+CI+G
Sbjct: 442 AYGQTECTAGCTLTSPGDWT---SGHVGVPLDCNHVKLEDVADMNYYSVNNEGEICIKGI 498
Query: 1504 CVMQGYWGDPQKTDEVIGQDKWYRTGDIAVMDEQGFCRIVGRAKDMI-IRGGENIYPAEL 1680
V +GY +P+KT+E + +D W TGDI G +I+ R K++ + GE I P ++
Sbjct: 499 NVFKGYLKEPEKTEEALDKDGWLHTGDIGRWLPNGTLKIIDRKKNIFKLAQGEYITPEKI 558
Query: 1681 EDFF 1692
E +
Sbjct: 559 ESIY 562
>ref|NP_001182250.1| long-chain-fatty-acid--CoA ligase 5 [Sus scrofa].
Length = 683
Score = 84.3 bits (207), Expect = 2e-16
Identities = 103/484 (21%), Positives = 190/484 (39%), Gaps = 54/484 (11%)
Frame = +1
Query: 403 LTFAQLKEQVDKAAAGLLSIGLRKG--DRLGMWGPNSYAWVLIQLATAQAGIILVSVNPA 576
L++ Q+ ++ + + LL G + + +G++ N W++ + A ++ V +
Sbjct: 106 LSYKQVSDRAEYLGSFLLHKGYKPSPDELIGIFAQNRPEWIISEYACYTYSMVAVPLYET 165
Query: 577 YQAPELEYALKKVGCKALVFPKQFKTQQYYNILKQICPEVEKAKPGALKSQR--LPDLTI 750
A ++Y + K I IC + EKA ++ +P L +
Sbjct: 166 LGAEAIKYIINKA-----------------EIATVICDKPEKALILIKDMEKGLIPSLKM 208
Query: 751 VISVDTPLPGTLFLDDVVAAGNQE----------QHLAQLRHTQKFLSCHDPINIQ-FTS 897
+I +D F DD+ G + +++ + + + ++I FTS
Sbjct: 209 IIIMDP------FEDDLKERGEKSGIEILSLLDAENIGKENFRKPVPPSPEDLSIVCFTS 262
Query: 898 GTTGSPKGATLSHYNIVNNSNMIGERLQLSQKTAEKSRMVLPTPLYHCLGSVG------- 1056
GTTG PKGA ++H NIV+N +RL+ + + + + PL H +
Sbjct: 263 GTTGDPKGAMITHQNIVSNVASFLKRLEYTFQPTPEDVSISYLPLAHMFDRIVQAIMFSC 322
Query: 1057 GTMVSLMHGVTLILSSPVFDGKKALEAISRERGSFLY------GTPTMFVDILNQPDFSS 1218
G V G +L + K L + + +Y + +LN S
Sbjct: 323 GARVGFFQGDIQLLPDDMKTLKPTLFPVVPRLLNKIYDKVQSEAKSPLKKFLLNLTIASK 382
Query: 1219 YD--------------------ISAICGG-----VIAGSPVPPELIRAIINKMNMKELVV 1323
++ I GG + A +PV ++ M +
Sbjct: 383 FNEVKRGVIRRDSFWDKLIFAKIQESLGGRIHFMITAAAPVSSPVLMFFRAAMGCP-VFE 441
Query: 1324 AYGTTENSPVTFMNFPEDTMEQKAESVGRVMPHTEAQIMNMETRTLAELNTPGELCIRGY 1503
AYG TE + + P D + VG + ++ ++ +N GE+CI+G
Sbjct: 442 AYGQTECTAGCTLTSPGDWT---SGHVGVPLDCNHVKLEDVADMNYYSVNNEGEICIKGI 498
Query: 1504 CVMQGYWGDPQKTDEVIGQDKWYRTGDIAVMDEQGFCRIVGRAKDMI-IRGGENIYPAEL 1680
V +GY +P+KT+E + +D W TGDI G +I+ R K++ + GE I P ++
Sbjct: 499 NVFKGYLKEPEKTEEALDKDGWLHTGDIGRWLPNGTLKIIDRKKNIFKLAQGEYITPEKI 558
Query: 1681 EDFF 1692
E +
Sbjct: 559 ESIY 562
>ref|XP_003123156.2| PREDICTED: long-chain-fatty-acid--CoA ligase ACSBG2 [Sus scrofa].
Length = 673
Score = 80.5 bits (197), Expect = 3e-15
Identities = 111/486 (22%), Positives = 187/486 (38%), Gaps = 58/486 (11%)
Frame = +1
Query: 403 LTFAQLKEQVDKAAAGLLSIGLRKGDRLGMWGPNSYAWVLIQLATAQAGIILVSVNPAYQ 582
L F Q E KA ++ +GL +G+ G NS W++ L AG V +
Sbjct: 83 LNFNQYYEACRKAGKAMMKLGLEPFHSVGILGFNSVEWLIAALGAILAGGFCVGIYATNS 142
Query: 583 APELEYALKKVGCKALVFPKQFKTQQYYNILKQICPEVEKAKPGALKSQRLPDLTIVISV 762
+Y + L+ + Q+ A+ R+ L +I
Sbjct: 143 TDACQYVITHAKVNILIVENDMQLQKIL----------------AIPKSRMETLKAIIQY 186
Query: 763 DTPLPGT-----LFLDDVVAAGNQ--EQHLAQLRHTQKFLSCHDPINIQFTSGTTGSPK- 918
P+ + DD + G + L Q+ QK C I +TSGT G+PK
Sbjct: 187 KVPVKESKSNNLYSWDDFMELGRSIPDAQLDQIIRNQKANQC---AVIIYTSGTIGNPKG 243
Query: 919 ------------GATLSHYNIV---NNSNMIGERLQLSQKTAEKSRMVLPTPLYHCL--- 1044
GA YN+ ++ L LS A+ + +P + +
Sbjct: 244 VMLSHDNITWMAGAAAREYNLAYACERQEVVVSYLPLSHIAAQMMDVWIPMKVGAFIYFA 303
Query: 1045 --GSVGGTMVSLMHGV--TLILSSP-VFDG-----KKALEAISRERGSFLYGTPTMFVDI 1194
++ GT+V+ + V T L P +++ K+A++ S R T +
Sbjct: 304 QPNALKGTLVNTLQEVKPTAFLGVPRIWEKMHEKIKEAIDKSSSLRKKVFSWARTTGFKV 363
Query: 1195 LNQPDFSSYDI----------------SAI----CGGVIAGSPVPPELIRAIINKMNMKE 1314
+ +D S++ C I+G+ + ++++
Sbjct: 364 NTKRMMGGHDTPMSYRMAKALVFSKVKSSVGLDHCHIFISGAAPLNQETAEFFLSLDIR- 422
Query: 1315 LVVAYGTTENS-PVTFMNFPEDTMEQKAESVGRVMPHTEAQIMNMETRTLAELNTPGELC 1491
+ AYG TE+S P T N K S G+V+P + ++ +T+ + GE+C
Sbjct: 423 IGEAYGMTESSGPHTLSNHEN----YKILSSGKVIPGCK-NMLYQQTK-----DGVGEIC 472
Query: 1492 IRGYCVMQGYWGDPQKTDEVIGQDKWYRTGDIAVMDEQGFCRIVGRAKDMII-RGGENIY 1668
+ G + GY T E I ++ W +GD+ MD QGF I GR K++II GGEN+
Sbjct: 473 LWGRHIFMGYLEREDATMEAIDEEGWLHSGDLGRMDNQGFLFITGRIKEIIITAGGENVA 532
Query: 1669 PAELED 1686
P +E+
Sbjct: 533 PIPIEN 538
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 56,566,485
Number of extensions: 1819578
Number of successful extensions: 8553
Number of sequences better than 1.0e-05: 18
Number of HSP's gapped: 8457
Number of HSP's successfully gapped: 22
Length of query: 689
Length of database: 11,343,932
Length adjustment: 106
Effective length of query: 583
Effective length of database: 8,704,850
Effective search space: 5074927550
Effective search space used: 5074927550
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002234
(2067 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr12 454 e-125
>Sscrofa_Chr12
|| Length = 63588571
Score = 454 bits (229), Expect = e-125
Identities = 232/233 (99%)
Strand = Plus / Plus
Query: 1 tccgcaacccataggcagaggcgaccctcccgcctccccgcgcttcgccccgcctcggcg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26802527 tccgcaacccataggcagaggcgaccctcccgcctccccgcgcttcgccccgcctcggcg 26802586
Query: 61 cgctttaaaagtttactccgggccgggacgctgacgtcgcgagccatggccgtctacctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26802587 cgctttaaaagtttactccgggccgggacgctgacgtcgcgagccatggccgtctacctc 26802646
Query: 121 gggatgctgcgcgtcgtgaggctgtgcgccgggaggccggaggtgctgggggccgggggc 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 26802647 gggatgctgcgcgtcgtgaggctgtgcgccgggaggccggaggtgctgggggcccggggc 26802706
Query: 181 ggcctctcccgggtttggcaggaagcgaggctgtggggcgtccgtcccctcag 233
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26802707 ggcctctcccgggtttggcaggaagcgaggctgtggggcgtccgtcccctcag 26802759
Score = 406 bits (205), Expect = e-110
Identities = 208/209 (99%)
Strand = Plus / Plus
Query: 225 tcccctcagttctggagaggtggatcacaccgcccccctgcccatcggaggcctcagcta 284
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26826631 tccccacagttctggagaggtggatcacaccgcccccctgcccatcggaggcctcagcta 26826690
Query: 285 catccagggcaacaccaaattgcgccttattaacaagactgtggggtggtgcctggatgc 344
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26826691 catccagggcaacaccaaattgcgccttattaacaagactgtggggtggtgcctggatgc 26826750
Query: 345 cacagcacagaagatcccggacaaagaggccttggttgtcttccacgaaaacataaggtt 404
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26826751 cacagcacagaagatcccggacaaagaggccttggttgtcttccacgaaaacataaggtt 26826810
Query: 405 gacctttgcccagctcaaggagcaggtgg 433
|||||||||||||||||||||||||||||
Sbjct: 26826811 gacctttgcccagctcaaggagcaggtgg 26826839
Score = 327 bits (165), Expect = 1e-86
Identities = 168/169 (99%)
Strand = Plus / Plus
Query: 730 aggctcccggacctgaccatcgtcatctcagtggacacccctctgccagggaccctgttt 789
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 26828498 aggctcccggacctgaccatcgtcatctcagtggacacccctctgccagggaccctgctt 26828557
Query: 790 ctggatgacgtggtggcagctggcaatcaagagcagcatctggctcagctccggcacacg 849
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26828558 ctggatgacgtggtggcagctggcaatcaagagcagcatctggctcagctccggcacacg 26828617
Query: 850 cagaagttcctgtcctgccatgaccccatcaacatccagttcacctcgg 898
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26828618 cagaagttcctgtcctgccatgaccccatcaacatccagttcacctcgg 26828666
Score = 317 bits (160), Expect = 1e-83
Identities = 160/160 (100%)
Strand = Plus / Plus
Query: 992 agacggcagagaagtcaaggatggtcctgcccacccccctgtaccactgcctgggttccg 1051
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26829424 agacggcagagaagtcaaggatggtcctgcccacccccctgtaccactgcctgggttccg 26829483
Query: 1052 tggggggcacaatggtgagcttgatgcatggggtcaccctcatcctgtcctctccggtct 1111
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26829484 tggggggcacaatggtgagcttgatgcatggggtcaccctcatcctgtcctctccggtct 26829543
Query: 1112 tcgatggcaagaaggcgctggaggccattagcagagagag 1151
||||||||||||||||||||||||||||||||||||||||
Sbjct: 26829544 tcgatggcaagaaggcgctggaggccattagcagagagag 26829583
Score = 297 bits (150), Expect = 1e-77
Identities = 153/154 (99%)
Strand = Plus / Plus
Query: 1427 aggcccagatcatgaatatggagacgaggacactggcagagctgaacacacctggagagc 1486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26838591 aggcccagatcatgaatatggagacgaggacactggcagagctgaacacacctggagagc 26838650
Query: 1487 tgtgtatccggggctactgcgtcatgcagggctactggggtgatcctcagaagacggacg 1546
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 26838651 tgtgtatccggggctactgcgtcatgcagggctactggggtgatcctcagaagacagacg 26838710
Query: 1547 aagtaatcggacaggacaagtggtatcggacagg 1580
||||||||||||||||||||||||||||||||||
Sbjct: 26838711 aagtaatcggacaggacaagtggtatcggacagg 26838744
Score = 289 bits (146), Expect = 3e-75
Identities = 146/146 (100%)
Strand = Plus / Plus
Query: 1580 gagacatcgctgtgatggacgagcagggcttctgcaggatcgtgggtcgcgccaaggata 1639
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26840114 gagacatcgctgtgatggacgagcagggcttctgcaggatcgtgggtcgcgccaaggata 26840173
Query: 1640 tgatcatccgaggtggtgagaacatctaccctgcggagctggaggacttctttcacactc 1699
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26840174 tgatcatccgaggtggtgagaacatctaccctgcggagctggaggacttctttcacactc 26840233
Query: 1700 acccacaggtgcaggatgtgcaggtg 1725
||||||||||||||||||||||||||
Sbjct: 26840234 acccacaggtgcaggatgtgcaggtg 26840259
Score = 268 bits (135), Expect = 1e-68
Identities = 135/135 (100%)
Strand = Plus / Plus
Query: 427 caggtggacaaagctgctgctgggctcttgagtatcggcctccgcaagggtgaccggctg 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26827475 caggtggacaaagctgctgctgggctcttgagtatcggcctccgcaagggtgaccggctg 26827534
Query: 487 ggcatgtggggacccaactcctatgcatgggtactcattcagctggccacagcccaggca 546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26827535 ggcatgtggggacccaactcctatgcatgggtactcattcagctggccacagcccaggca 26827594
Query: 547 ggcatcattctggtg 561
|||||||||||||||
Sbjct: 26827595 ggcatcattctggtg 26827609
Score = 252 bits (127), Expect = 7e-64
Identities = 134/135 (99%), Gaps = 1/135 (0%)
Strand = Plus / Plus
Query: 1901 aggtccagaaattcaaacttcgagagcagatggaacaacgtctaaacctgtgaataagag 1960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26840999 aggtccagaaattcaaacttcgagagcagatggaacaacgtctaaacctgtgaataagag 26841058
Query: 1961 aggggggcagtcctcccaggccctccctgccctttt-ccacatcccccctcttgtccctg 2019
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 26841059 aggggggcagtcctcccaggccctccctgcccttttcccacatcccccctcttgtccctg 26841118
Query: 2020 tgatcctggcataaa 2034
|||||||||||||||
Sbjct: 26841119 tgatcctggcataaa 26841133
Score = 242 bits (122), Expect = 6e-61
Identities = 122/122 (100%)
Strand = Plus / Plus
Query: 611 aggtgggctgcaaagccctcgtgttccccaagcaattcaagacccagcagtactacaaca 670
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26828248 aggtgggctgcaaagccctcgtgttccccaagcaattcaagacccagcagtactacaaca 26828307
Query: 671 tcctgaagcagatctgtccagaggtggagaaggccaagccaggggccttgaagagccaga 730
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26828308 tcctgaagcagatctgtccagaggtggagaaggccaagccaggggccttgaagagccaga 26828367
Query: 731 gg 732
||
Sbjct: 26828368 gg 26828369
Score = 224 bits (113), Expect = 2e-55
Identities = 113/113 (100%)
Strand = Plus / Plus
Query: 1721 aggtggtgggagtgaaggacaaccggatgggggaggaaatctgtgcctgcattcggctca 1780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26840358 aggtggtgggagtgaaggacaaccggatgggggaggaaatctgtgcctgcattcggctca 26840417
Query: 1781 agaagggggagaagaccacggcggaggagatcaaggctttctgcaaagggaag 1833
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26840418 agaagggggagaagaccacggcggaggagatcaaggctttctgcaaagggaag 26840470
Score = 218 bits (110), Expect = 9e-54
Identities = 110/110 (100%)
Strand = Plus / Plus
Query: 1320 ggtggcttatggaaccacagaaaatagtcctgtcactttcatgaactttcccgaggacac 1379
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26837017 ggtggcttatggaaccacagaaaatagtcctgtcactttcatgaactttcccgaggacac 26837076
Query: 1380 catggagcagaaggcagaaagtgtgggcagagttatgccccacaccgagg 1429
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26837077 catggagcagaaggcagaaagtgtgggcagagttatgccccacaccgagg 26837126
Score = 192 bits (97), Expect = 5e-46
Identities = 97/97 (100%)
Strand = Plus / Plus
Query: 1150 agaggctccttcctgtatggcacccctaccatgttcgtggacattctgaaccaaccggac 1209
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26829873 agaggctccttcctgtatggcacccctaccatgttcgtggacattctgaaccaaccggac 26829932
Query: 1210 ttctccagttacgacatctcagccatttgtggaggtg 1246
|||||||||||||||||||||||||||||||||||||
Sbjct: 26829933 ttctccagttacgacatctcagccatttgtggaggtg 26829969
Score = 184 bits (93), Expect = 1e-43
Identities = 96/97 (98%)
Strand = Plus / Plus
Query: 897 ggggacaaccggcagtcccaagggggccacgctctcccactacaacatcgtcaacaactc 956
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 26829186 ggggacaaccggcagtcccaagggggccacgctctcccactacaacatcgtaaacaactc 26829245
Query: 957 caacatgataggggagcgcctgcaactgtcacagaag 993
|||||||||||||||||||||||||||||||||||||
Sbjct: 26829246 caacatgataggggagcgcctgcaactgtcacagaag 26829282
Score = 163 bits (82), Expect = 5e-37
Identities = 82/82 (100%)
Strand = Plus / Plus
Query: 1242 aggtgttattgccgggtcacccgtacccccagagctgatccgcgccatcatcaacaagat 1301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26830236 aggtgttattgccgggtcacccgtacccccagagctgatccgcgccatcatcaacaagat 26830295
Query: 1302 gaacatgaaggagctggtggtg 1323
||||||||||||||||||||||
Sbjct: 26830296 gaacatgaaggagctggtggtg 26830317
Score = 145 bits (73), Expect = 1e-31
Identities = 73/73 (100%)
Strand = Plus / Plus
Query: 1832 agatctcccactttaagattcctcggtacatcgtgtttgtgacagactaccccctcaccg 1891
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26840637 agatctcccactttaagattcctcggtacatcgtgtttgtgacagactaccccctcaccg 26840696
Query: 1892 tctcgggaaaggt 1904
|||||||||||||
Sbjct: 26840697 tctcgggaaaggt 26840709
Score = 113 bits (57), Expect = 4e-22
Identities = 57/57 (100%)
Strand = Plus / Plus
Query: 558 ggtgtccgtgaacccagcctaccaggctccagagctggagtatgccctcaagaaggt 614
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26827851 ggtgtccgtgaacccagcctaccaggctccagagctggagtatgccctcaagaaggt 26827907
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 53,476,672
Number of extensions: 336
Number of successful extensions: 336
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 335
Number of HSP's successfully gapped: 16
Length of query: 2067
Length of database: 2,808,509,378
Length adjustment: 22
Effective length of query: 2045
Effective length of database: 2,808,408,574
Effective search space: 5743195533830
Effective search space used: 5743195533830
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)