Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002235
(1428 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_777096.1| mitochondrial 2-oxoglutarate/malate carrier pro... 601 e-172
Alignment gi|NP_001039610.1| brain mitochondrial carrier protein 1 [Bos t... 191 1e-48
Alignment gi|NP_776635.1| mitochondrial uncoupling protein 3 [Bos taurus]. 178 1e-44
Alignment gi|NP_001092365.1| kidney mitochondrial carrier protein 1 [Bos ... 174 2e-43
Alignment gi|NP_001028783.1| mitochondrial uncoupling protein 2 [Bos taur... 158 1e-38
Alignment gi|NP_001029669.1| solute carrier family 25 member 34 [Bos taur... 154 1e-37
Alignment gi|XP_002705973.1| PREDICTED: solute carrier family 25 (mitocho... 152 5e-37
Alignment gi|NP_001193123.1| mitochondrial uncoupling protein 4 [Bos taur... 148 1e-35
Alignment gi|XP_002697311.1| PREDICTED: solute carrier family 25, member ... 148 1e-35
Alignment gi|NP_001160000.1| mitochondrial brown fat uncoupling protein 1... 147 2e-35
>ref|NP_777096.1| mitochondrial 2-oxoglutarate/malate carrier protein [Bos taurus].
Length = 314
Score = 601 bits (1550), Expect = e-172
Identities = 302/313 (96%), Positives = 306/313 (97%)
Frame = +2
Query: 140 MAATASPGAGGMDAKPRTSPKSVKFLFGGLAGMGATVFVQPLDLVKNRMQLSGEGAKTRE 319
MAATASPGA GMD KPRTSPKSVKFLFGGLAGMGATVFVQPLDLVKNRMQLSGEGAKTRE
Sbjct: 1 MAATASPGASGMDGKPRTSPKSVKFLFGGLAGMGATVFVQPLDLVKNRMQLSGEGAKTRE 60
Query: 320 YKTSFHALTSILRAEGLRGIYTGLSAGLLRQATYTTTRLGIYTVLFERLTGADGTPPGFL 499
YKTSFHAL SILRAEGLRGIYTGLSAGLLRQATYTTTRLGIYTVLFERLTGADGTPPGFL
Sbjct: 61 YKTSFHALISILRAEGLRGIYTGLSAGLLRQATYTTTRLGIYTVLFERLTGADGTPPGFL 120
Query: 500 LKALIGMTAGATGAFVGTPAEVALIRMTADGRLPPDQRRGYKNVFDALIRIVREEGVPTL 679
LKA+IGMTAGATGAFVGTPAEVALIRMTADGRLP DQRRGYKNVF+AL RIV+EEGVPTL
Sbjct: 121 LKAVIGMTAGATGAFVGTPAEVALIRMTADGRLPVDQRRGYKNVFNALFRIVQEEGVPTL 180
Query: 680 WRGCIPTMARAVVVNAAQLASYSQSKQFLLDSGYFSDNILCHFCASMISGLVTTAASMPV 859
WRGCIPTMARAVVVNAAQLASYSQSKQFLLDSGYFSDNILCHFCASMISGLVTTAASMPV
Sbjct: 181 WRGCIPTMARAVVVNAAQLASYSQSKQFLLDSGYFSDNILCHFCASMISGLVTTAASMPV 240
Query: 860 DIAKTRIQNMRTIDGKPEYKNGLDVLVKVIRYEGFFSLWKGFTPYYARLGPHTVLTFIFL 1039
DI KTRIQNMR IDGKPEYKNGLDVLVKV+RYEGFFSLWKGFTPYYARLGPHTVLTFIFL
Sbjct: 241 DIVKTRIQNMRMIDGKPEYKNGLDVLVKVVRYEGFFSLWKGFTPYYARLGPHTVLTFIFL 300
Query: 1040 EQMNKAYKRLFLS 1078
EQMNKAYKRLFLS
Sbjct: 301 EQMNKAYKRLFLS 313
>ref|NP_001039610.1| brain mitochondrial carrier protein 1 [Bos taurus].
Length = 325
Score = 191 bits (486), Expect = 1e-48
Identities = 115/309 (37%), Positives = 170/309 (55%), Gaps = 5/309 (1%)
Frame = +2
Query: 143 AATASPGAGGMDAKPRTSPKSVKFLFGGLAGMGATVFVQPLDLVKNRMQLSGEGAKTR-- 316
+AT S G++ KP F++GGLA + A P+DL K R+Q+ G+ R
Sbjct: 29 SATVSHEMSGLNWKP--------FVYGGLASIVAEFGTFPVDLTKTRLQVQGQSIDVRFK 80
Query: 317 --EYKTSFHALTSILRAEGLRGIYTGLSAGLLRQATYTTTRLGIYTVLFERLTGADGTPP 490
+Y+ FHAL I + EG+ +Y+G++ LLRQA+Y T ++GIY L +RL
Sbjct: 81 EIKYRGMFHALFRIYKEEGVLALYSGIAPALLRQASYGTIKIGIYQSL-KRLFVERLEDE 139
Query: 491 GFLLKALIGMTAGATGAFVGTPAEVALIRMTADGRLPPDQRRGYKNVFDALIRIVREEGV 670
L+ + G+ +G + + P +V IRM A G L G + I I ++EG
Sbjct: 140 TLLINMICGVVSGVISSAIANPTDVLKIRMQAQGSLFQGSMIG------SFIDIYQQEGT 193
Query: 671 PTLWRGCIPTMARAVVVNAAQLASYSQSKQFLLDSGYFSDNILCHFCASMISGLVTTAAS 850
LWRG +PT RA +V +L Y +K+ L+ SG D IL HF +S GL AS
Sbjct: 194 RGLWRGVVPTAQRAAIVVGVELPVYDITKKHLILSGLMGDTILTHFVSSFTCGLAGALAS 253
Query: 851 MPVDIAKTRIQNMRTIDGKPE-YKNGLDVLVKVIRYEGFFSLWKGFTPYYARLGPHTVLT 1027
PVD+ +TR+ N R I G + YK LD ++K+ ++EGFF+L+KGF P + RLGP ++
Sbjct: 254 NPVDVVRTRMMNQRAIVGHVDLYKGTLDGILKMWKHEGFFALYKGFWPNWLRLGPWNIIF 313
Query: 1028 FIFLEQMNK 1054
FI EQ+ +
Sbjct: 314 FITYEQLKR 322
>ref|NP_776635.1| mitochondrial uncoupling protein 3 [Bos taurus].
Length = 311
Score = 178 bits (451), Expect = 1e-44
Identities = 101/305 (33%), Positives = 153/305 (50%), Gaps = 5/305 (1%)
Frame = +2
Query: 170 GMDAKPRTSPKSVKFLFGGLAGMGATVFVQPLDLVKNRMQLSGEG-----AKTREYKTSF 334
G+ R SVKFL G A A + PLD K R+Q+ GE A++ +Y+
Sbjct: 3 GLQPSERPPTTSVKFLAAGTAACFADLLTFPLDTAKVRLQIQGENQAALAARSAQYRGVL 62
Query: 335 HALTSILRAEGLRGIYTGLSAGLLRQATYTTTRLGIYTVLFERLTGADGTPPGFLLKALI 514
+ +++R EG R +Y+GL AGL RQ ++ + R+G+Y + + T + + L
Sbjct: 63 GTILTMVRTEGPRSLYSGLVAGLQRQMSFASIRIGLYDSVKQFYTPKGSDHSSIITRILA 122
Query: 515 GMTAGATGAFVGTPAEVALIRMTADGRLPPDQRRGYKNVFDALIRIVREEGVPTLWRGCI 694
G T GA P +V IR A R Y DA I REEGV LW+G +
Sbjct: 123 GCTTGAMAVTCAQPTDVVKIRFQASMHTGLGGNRKYSGTMDAYRTIAREEGVRGLWKGIL 182
Query: 695 PTMARAVVVNAAQLASYSQSKQFLLDSGYFSDNILCHFCASMISGLVTTAASMPVDIAKT 874
P + R +VN ++ +Y K+ LLD +DN CHF ++ +G T + PVD+ KT
Sbjct: 183 PNITRNAIVNCGEMVTYDIIKEKLLDYHLLTDNFPCHFVSAFGAGFCATLVASPVDVVKT 242
Query: 875 RIQNMRTIDGKPEYKNGLDVLVKVIRYEGFFSLWKGFTPYYARLGPHTVLTFIFLEQMNK 1054
R N +Y + D ++K++ EG + +KGFTP + RLG V+ F+ EQM +
Sbjct: 243 RYMN----SPPGQYHSPFDCMLKMVTQEGPTAFYKGFTPSFLRLGSWNVVMFVTYEQMKR 298
Query: 1055 AYKRL 1069
A ++
Sbjct: 299 ALMKV 303
>ref|NP_001092365.1| kidney mitochondrial carrier protein 1 [Bos taurus].
Length = 291
Score = 174 bits (440), Expect = 2e-43
Identities = 104/287 (36%), Positives = 153/287 (53%), Gaps = 6/287 (2%)
Frame = +2
Query: 212 FLFGGLAGMGATVFVQPLDLVKNRMQLSGE----GAKTREYKTSFHALTSILRAEGLRGI 379
F++GGLA + A P+DL K R+Q+ G+ K Y+ HAL I R EGL+ +
Sbjct: 9 FVYGGLASITAECGTFPIDLTKTRLQIQGQKNDANFKEIRYRGMLHALVRIGREEGLKAL 68
Query: 380 YTGLSAGLLRQATYTTTRLGIYTVLFERLTGADGTPPGFLLKALIGMTAGATGAFVGTPA 559
Y+G++ +LRQA+Y T ++G Y L +RL L+ + G+ +G + + P
Sbjct: 69 YSGIAPAMLRQASYGTIKIGTYQSL-KRLFVERPEDETLLINVVCGILSGVISSSIANPT 127
Query: 560 EVALIRMTADGRLPPDQRRGYKNVFDALIRIVREEGVPTLWRGCIPTMARAVVVNAAQLA 739
+V IRM A G I I ++EG LW+G T RA +V +L
Sbjct: 128 DVLKIRMQAQSSTLQGGMIGN------FINIYQQEGTRGLWKGVSLTAQRAAIVVGVELP 181
Query: 740 SYSQSKQFLLDSGYFSDNILCHFCASMISGLVTTAASMPVDIAKTRIQNMRTI-DGK-PE 913
Y +K+ L+ SG D + HF +S GL AS PVD+ +TR+ N R + DGK P
Sbjct: 182 VYDLTKKHLILSGLMGDTVYTHFLSSFTCGLAGALASNPVDVVRTRMMNQRVLRDGKCPG 241
Query: 914 YKNGLDVLVKVIRYEGFFSLWKGFTPYYARLGPHTVLTFIFLEQMNK 1054
YK LD L++ + EGFF+L+KGF P + RLGP ++ F+ EQ+ K
Sbjct: 242 YKGTLDCLLQTWKNEGFFALYKGFWPNWLRLGPWNIIFFVAYEQLKK 288
Score = 59.3 bits (142), Expect = 8e-09
Identities = 57/244 (23%), Positives = 92/244 (37%), Gaps = 10/244 (4%)
Frame = +2
Query: 59 LLRAQCHLGRERGRARTGPGAEGH*VAMAATASPGAGGMDA-------KPRTSPKSVKFL 217
+L A +GRE G G + A+ + G + +P + +
Sbjct: 52 MLHALVRIGREEGLKALYSGIAPAMLRQASYGTIKIGTYQSLKRLFVERPEDETLLINVV 111
Query: 218 FGGLAGMGATVFVQPLDLVKNRMQLSG---EGAKTREYKTSFHALTSILRAEGLRGIYTG 388
G L+G+ ++ P D++K RMQ +G + +I + EG RG++ G
Sbjct: 112 CGILSGVISSSIANPTDVLKIRMQAQSSTLQGGMIGNF-------INIYQQEGTRGLWKG 164
Query: 389 LSAGLLRQATYTTTRLGIYTVLFERLTGADGTPPGFLLKALIGMTAGATGAFVGTPAEVA 568
+S R A L +Y + + L + L T G GA P +V
Sbjct: 165 VSLTAQRAAIVVGVELPVYDLTKKHLILSGLMGDTVYTHFLSSFTCGLAGALASNPVDVV 224
Query: 569 LIRMTADGRLPPDQRRGYKNVFDALIRIVREEGVPTLWRGCIPTMARAVVVNAAQLASYS 748
RM L + GYK D L++ + EG L++G P R N +Y
Sbjct: 225 RTRMMNQRVLRDGKCPGYKGTLDCLLQTWKNEGFFALYKGFWPNWLRLGPWNIIFFVAYE 284
Query: 749 QSKQ 760
Q K+
Sbjct: 285 QLKK 288
>ref|NP_001028783.1| mitochondrial uncoupling protein 2 [Bos taurus].
Length = 309
Score = 158 bits (400), Expect = 1e-38
Identities = 96/291 (32%), Positives = 150/291 (51%), Gaps = 6/291 (2%)
Frame = +2
Query: 203 SVKFLFGGLAGMGATVFVQPLDLVKNRMQLSGE------GAKTREYKTSFHALTSILRAE 364
+VKFL G A A + PLD K R+Q+ GE A + +Y+ + +++R E
Sbjct: 14 TVKFLGAGTAACIADLITFPLDTAKVRLQIQGERQGPMQAAASAQYRGVLGTILTMVRTE 73
Query: 365 GLRGIYTGLSAGLLRQATYTTTRLGIYTVLFERLTGADGTPPGFLLKALIGMTAGATGAF 544
G R +Y+GL AGL RQ ++ + R+G+Y + + T G + L G T GA
Sbjct: 74 GPRSLYSGLVAGLQRQMSFASVRIGLYDSVKQFYTKGS-EHAGIGSRLLAGSTTGALAVA 132
Query: 545 VGTPAEVALIRMTADGRLPPDQRRGYKNVFDALIRIVREEGVPTLWRGCIPTMARAVVVN 724
V P +V +R A R +R Y++ +A I REEG LW+G P +AR +VN
Sbjct: 133 VAQPTDVVKVRFQAQARAGAGRR--YQSTVEAYKTIAREEGFRGLWKGTSPNVARNAIVN 190
Query: 725 AAQLASYSQSKQFLLDSGYFSDNILCHFCASMISGLVTTAASMPVDIAKTRIQNMRTIDG 904
A+L +Y K LL + +D++ CHF ++ +G TT + PVD+ KTR N
Sbjct: 191 CAELVTYDLIKDTLLKAHLMTDDLPCHFTSAFGAGFCTTVIASPVDVVKTRYMN----SA 246
Query: 905 KPEYKNGLDVLVKVIRYEGFFSLWKGFTPYYARLGPHTVLTFIFLEQMNKA 1057
+Y + + +++ EG + +KGF P + RLG V+ F+ EQ+ +A
Sbjct: 247 LGQYSSAGHCALTMLQKEGPQAFYKGFMPSFLRLGSWNVVMFVTYEQLKRA 297
Score = 62.4 bits (150), Expect = 1e-09
Identities = 46/189 (24%), Positives = 76/189 (40%), Gaps = 2/189 (1%)
Frame = +2
Query: 209 KFLFGGLAGMGATVFVQPLDLVKNRMQLSGEGAKTREYKTSFHALTSILRAEGLRGIYTG 388
+ L G G A QP D+VK R Q R Y+++ A +I R EG RG++ G
Sbjct: 119 RLLAGSTTGALAVAVAQPTDVVKVRFQAQARAGAGRRYQSTVEAYKTIAREEGFRGLWKG 178
Query: 389 LSAGLLRQATYTTTRLGIYTVLFERLTGADGTPPGFLLKALIGMTAGATGAFVGTPAEVA 568
S + R A L Y ++ + L A AG + +P +V
Sbjct: 179 TSPNVARNAIVNCAELVTYDLIKDTLLKAHLMTDDLPCHFTSAFGAGFCTTVIASPVDVV 238
Query: 569 LIRM--TADGRLPPDQRRGYKNVFDALIRIVREEGVPTLWRGCIPTMARAVVVNAAQLAS 742
R +A G+ Y + + ++++EG ++G +P+ R N +
Sbjct: 239 KTRYMNSALGQ--------YSSAGHCALTMLQKEGPQAFYKGFMPSFLRLGSWNVVMFVT 290
Query: 743 YSQSKQFLL 769
Y Q K+ L+
Sbjct: 291 YEQLKRALM 299
>ref|NP_001029669.1| solute carrier family 25 member 34 [Bos taurus].
Length = 304
Score = 154 bits (390), Expect = 1e-37
Identities = 103/298 (34%), Positives = 161/298 (54%), Gaps = 10/298 (3%)
Frame = +2
Query: 191 TSPKSVKFLFGGLAGMGATVFVQPLDLVKNRMQLSGE----GAKTREYKTSFHALTSILR 358
T P +V + G A A VF PL++VK R+QL GE G R Y+ ++ +++R
Sbjct: 3 TVPPAVDLVLGASACCLACVFTNPLEVVKTRLQLQGELQKRGTYPRLYRGFVASVVAVVR 62
Query: 359 AEGLRGIYTGLSAGLLRQATYTTTRLGIYTVLFERLTGADGTPPGFLLKALIGMTAGATG 538
A+GL G+ GL+AGLL Q R Y++ + G P G ++ G AGA G
Sbjct: 63 ADGLCGLQKGLAAGLLYQGLMNGVRFYCYSLACQ--AGLSQQPGGTVVA---GAVAGALG 117
Query: 539 AFVGTPAEVALIRMTAD--GRLPPDQRRGYKNVFDALIRIVREEGVPTLWRGCIPTMARA 712
AFVG+PA + ++ A + + ++++ AL I R++G+ LWRG + R
Sbjct: 118 AFVGSPAYLVKTQLQAQTVAAMAVGHQHHHESLLGALETIWRQQGLAGLWRGVGGAVPRV 177
Query: 713 VVVNAAQLASYSQSKQFLLDSGYF-SDNILCHFCASMISGLVTTAASMPVDIAKTRIQNM 889
+V +AAQLA+++ +K ++ + + D+ L MIS + A P D+ TR+ N
Sbjct: 178 MVGSAAQLATFASAKAWVQERQWLPEDSWLVALAGGMISSIAVVAVMTPFDVVSTRLYN- 236
Query: 890 RTIDGKPEYK--NGL-DVLVKVIRYEGFFSLWKGFTPYYARLGPHTVLTFIFLEQMNK 1054
+ +DG K GL D LVK+ R EG +L+KG P Y RLGPHT+L+ +F +++ K
Sbjct: 237 QPVDGAGRGKLYGGLTDCLVKIWRQEGPLALYKGLGPVYLRLGPHTILSMLFWDELRK 294
>ref|XP_002705973.1| PREDICTED: solute carrier family 25 (mitochondrial carrier, brain),
member 14-like [Bos taurus].
Length = 253
Score = 152 bits (385), Expect = 5e-37
Identities = 93/250 (37%), Positives = 135/250 (54%), Gaps = 5/250 (2%)
Frame = +2
Query: 212 FLFGGLAGMGATVFVQPLDLVKNRMQLSGEGAKTR----EYKTSFHALTSILRAEGLRGI 379
F++GGLA + A P+DL K R+Q+ G+ R +Y+ FHAL I + EG+ +
Sbjct: 9 FVYGGLASIVAEFGTFPVDLTKTRLQVQGQSIDVRFKEIKYRGMFHALFRIYKEEGVLAL 68
Query: 380 YTGLSAGLLRQATYTTTRLGIYTVLFERLTGADGTPPGFLLKALIGMTAGATGAFVGTPA 559
Y+G++ LLRQA+Y T ++GIY L +RL L+ + G+ +G + + P
Sbjct: 69 YSGIAPALLRQASYGTIKIGIYQSL-KRLFVERLEDETLLINMICGVVSGVISSAIANPT 127
Query: 560 EVALIRMTADGRLPPDQRRGYKNVFDALIRIVREEGVPTLWRGCIPTMARAVVVNAAQLA 739
+V IRM A G L G + I I ++EG LWRG +PT RA +V +L
Sbjct: 128 DVLKIRMQAQGSLFQGSMIG------SFIDIYQQEGTRGLWRGVVPTAQRAAIVVGVELP 181
Query: 740 SYSQSKQFLLDSGYFSDNILCHFCASMISGLVTTAASMPVDIAKTRIQNMRTIDGKPE-Y 916
Y +K+ L+ SG D IL HF +S GL AS PVD+ +TR+ N R I G + Y
Sbjct: 182 VYDITKKHLILSGLMGDTILTHFVSSFTCGLAGALASNPVDVVRTRMMNQRAIVGHVDLY 241
Query: 917 KNGLDVLVKV 946
K LD ++KV
Sbjct: 242 KGTLDGILKV 251
>ref|NP_001193123.1| mitochondrial uncoupling protein 4 [Bos taurus].
Length = 323
Score = 148 bits (374), Expect = 1e-35
Identities = 92/299 (30%), Positives = 154/299 (51%), Gaps = 13/299 (4%)
Frame = +2
Query: 197 PKSVKFLFGGLAGMGATVFVQPLDLVKNRMQLSGEGAKTR---------EYKTSFHALTS 349
P++ KFL G A A + PLDL K R+Q+ GE A R Y+
Sbjct: 18 PRACKFLLSGCAATVAELATFPLDLTKTRLQIQGEAALARLGDGATESAPYRGMVRTALG 77
Query: 350 ILRAEGLRGIYTGLSAGLLRQATYTTTRLGIYTVLFERLTGADGTPPGFLLKALIG-MTA 526
I++ EG ++ G++ + R Y+ R+ Y L E + G L K++IG M A
Sbjct: 78 IVQEEGFLKLWQGVTPAIYRHIVYSGGRMVTYEHLREVVFGKSEDKHYPLWKSVIGGMMA 137
Query: 527 GATGAFVGTPAEVALIRMTADGRLPPDQRR-GYKNVFDALIRIVREEGVPTLWRGCIPTM 703
G G F+ P ++ ++M +G+ + + ++ V A +I+ E G+ LW G +P +
Sbjct: 138 GVVGQFLANPTDLVKVQMQMEGKRKLEGKPLRFRGVHHAFAKILAEGGIRGLWAGWVPNI 197
Query: 704 ARAVVVNAAQLASYSQSKQFLLDSGYFSDNILCHFCASMISGLVTTAASMPVDIAKTRIQ 883
RA +VN L +Y K +L+ + DNI+ H +S+ SGLV + P D+ K+RI
Sbjct: 198 QRAALVNMGDLTTYDTVKHYLVLNTPLEDNIVTHGLSSLCSGLVASILGTPADVIKSRIM 257
Query: 884 NM-RTIDGKP-EYKNGLDVLVKVIRYEGFFSLWKGFTPYYARLGPHTVLTFIFLEQMNK 1054
N R G+ YK+ D L++ ++ EGF SL+KGF P + R+ P +++ ++ E++ +
Sbjct: 258 NQPRDKQGRGLLYKSSTDCLIQAVQGEGFLSLYKGFLPSWLRMTPWSLVFWLTYEKIRE 316
>ref|XP_002697311.1| PREDICTED: solute carrier family 25, member 27 [Bos taurus].
Length = 323
Score = 148 bits (374), Expect = 1e-35
Identities = 92/299 (30%), Positives = 154/299 (51%), Gaps = 13/299 (4%)
Frame = +2
Query: 197 PKSVKFLFGGLAGMGATVFVQPLDLVKNRMQLSGEGAKTR---------EYKTSFHALTS 349
P++ KFL G A A + PLDL K R+Q+ GE A R Y+
Sbjct: 18 PRACKFLLSGCAATVAELATFPLDLTKTRLQIQGEAALARLGDGATESAPYRGMVRTALG 77
Query: 350 ILRAEGLRGIYTGLSAGLLRQATYTTTRLGIYTVLFERLTGADGTPPGFLLKALIG-MTA 526
I++ EG ++ G++ + R Y+ R+ Y L E + G L K++IG M A
Sbjct: 78 IVQEEGFLKLWQGVTPAIYRHIVYSGGRMVTYEHLREVVFGKSEDKHYPLWKSVIGGMMA 137
Query: 527 GATGAFVGTPAEVALIRMTADGRLPPDQRR-GYKNVFDALIRIVREEGVPTLWRGCIPTM 703
G G F+ P ++ ++M +G+ + + ++ V A +I+ E G+ LW G +P +
Sbjct: 138 GVVGQFLANPTDLVKVQMQMEGKRKLEGKPLRFRGVHHAFAKILAEGGIRGLWAGWVPNI 197
Query: 704 ARAVVVNAAQLASYSQSKQFLLDSGYFSDNILCHFCASMISGLVTTAASMPVDIAKTRIQ 883
RA +VN L +Y K +L+ + DNI+ H +S+ SGLV + P D+ K+RI
Sbjct: 198 QRAALVNMGDLTTYDTVKHYLVLNTPLEDNIVTHGLSSLCSGLVASILGTPADVIKSRIM 257
Query: 884 NM-RTIDGKP-EYKNGLDVLVKVIRYEGFFSLWKGFTPYYARLGPHTVLTFIFLEQMNK 1054
N R G+ YK+ D L++ ++ EGF SL+KGF P + R+ P +++ ++ E++ +
Sbjct: 258 NQPRDKQGRGLLYKSSTDCLIQAVQGEGFLSLYKGFLPSWLRMTPWSLVFWLTYEKIRE 316
>ref|NP_001160000.1| mitochondrial brown fat uncoupling protein 1 [Bos taurus].
Length = 309
Score = 147 bits (372), Expect = 2e-35
Identities = 87/290 (30%), Positives = 146/290 (50%), Gaps = 6/290 (2%)
Frame = +2
Query: 203 SVKFLFGGLAGMGATVFVQPLDLVKNRMQ----LSGEG--AKTREYKTSFHALTSILRAE 364
+VK G+A A + PLD K R+Q + GE + YK + ++ + E
Sbjct: 14 AVKIFSAGVAACVADIITFPLDTAKVRLQVGSAIQGECLISSAIRYKGVLGTIITLAKTE 73
Query: 365 GLRGIYTGLSAGLLRQATYTTTRLGIYTVLFERLTGADGTPPGFLLKALIGMTAGATGAF 544
G +Y+GL AGL RQ ++ + R+G+Y + E T G + A G+ G F
Sbjct: 74 GPVKLYSGLPAGLQRQISFASLRIGLYDTVQEFFTTGKEASLGSKISA--GLMTGGVAVF 131
Query: 545 VGTPAEVALIRMTADGRLPPDQRRGYKNVFDALIRIVREEGVPTLWRGCIPTMARAVVVN 724
+G P EV +R+ A L + R Y ++A I EG+ LW+G P + R V++N
Sbjct: 132 IGQPTEVVKVRLQAQSHLHGPKPR-YTGTYNAYRIIATTEGLTGLWKGTTPNLTRNVIIN 190
Query: 725 AAQLASYSQSKQFLLDSGYFSDNILCHFCASMISGLVTTAASMPVDIAKTRIQNMRTIDG 904
+L +Y K+ L+ + +D++ CHF +++++G TT S PVD+ KTR N
Sbjct: 191 CTELVTYDLMKEALVKNKLLADDVPCHFVSAVVAGFCTTVLSSPVDVVKTRFVN----SS 246
Query: 905 KPEYKNGLDVLVKVIRYEGFFSLWKGFTPYYARLGPHTVLTFIFLEQMNK 1054
+Y + + + ++ EG + +KGF P + RLG ++ F+ EQ+ +
Sbjct: 247 PGQYTSVPNCAMMMLTREGPSAFFKGFVPSFLRLGSWNIIMFVCFEQLKQ 296
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 57,438,864
Number of extensions: 1731804
Number of successful extensions: 7367
Number of sequences better than 1.0e-05: 64
Number of HSP's gapped: 7136
Number of HSP's successfully gapped: 114
Length of query: 476
Length of database: 17,681,374
Length adjustment: 106
Effective length of query: 370
Effective length of database: 14,174,046
Effective search space: 5244397020
Effective search space used: 5244397020
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002235
(1428 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_536607.1| PREDICTED: similar to Mitochondrial 2-oxoglutar... 610 e-175
Alignment gi|XP_856284.1| PREDICTED: similar to Mitochondrial 2-oxoglutar... 481 e-136
Alignment gi|XP_865863.1| PREDICTED: similar to Brain mitochondrial carri... 191 1e-48
Alignment gi|XP_852497.1| PREDICTED: similar to Brain mitochondrial carri... 191 1e-48
Alignment gi|NP_001003047.1| mitochondrial uncoupling protein 3 [Canis lu... 172 9e-43
Alignment gi|XP_546609.2| PREDICTED: similar to solute carrier family 25,... 162 7e-40
Alignment gi|NP_001003048.1| mitochondrial uncoupling protein 2 [Canis lu... 160 3e-39
Alignment gi|XP_851381.1| PREDICTED: similar to solute carrier family 25,... 160 4e-39
Alignment gi|XP_865850.1| PREDICTED: similar to Brain mitochondrial carri... 159 6e-39
Alignment gi|NP_001003046.1| mitochondrial brown fat uncoupling protein 1... 159 8e-39
>ref|XP_536607.1| PREDICTED: similar to Mitochondrial 2-oxoglutarate/malate carrier
protein (OGCP) isoform 1 [Canis familiaris].
Length = 314
Score = 610 bits (1574), Expect = e-175
Identities = 306/313 (97%), Positives = 309/313 (98%)
Frame = +2
Query: 140 MAATASPGAGGMDAKPRTSPKSVKFLFGGLAGMGATVFVQPLDLVKNRMQLSGEGAKTRE 319
MAATASPGAGG+D KPRTSPKSVKFLFGGLAGMGATVFVQPLDLVKNRMQLSGEGAKTRE
Sbjct: 1 MAATASPGAGGVDGKPRTSPKSVKFLFGGLAGMGATVFVQPLDLVKNRMQLSGEGAKTRE 60
Query: 320 YKTSFHALTSILRAEGLRGIYTGLSAGLLRQATYTTTRLGIYTVLFERLTGADGTPPGFL 499
YKTSFHALTSILRAEGLRGIYTGLSAGLLRQATYTTTRLGIYTVLFERLTGADGTPPGFL
Sbjct: 61 YKTSFHALTSILRAEGLRGIYTGLSAGLLRQATYTTTRLGIYTVLFERLTGADGTPPGFL 120
Query: 500 LKALIGMTAGATGAFVGTPAEVALIRMTADGRLPPDQRRGYKNVFDALIRIVREEGVPTL 679
LKALIGMTAGATGAFVGTPAEVALIRMTADGRLPPDQRRGYKNVF+ALIRI REEGVPTL
Sbjct: 121 LKALIGMTAGATGAFVGTPAEVALIRMTADGRLPPDQRRGYKNVFNALIRIAREEGVPTL 180
Query: 680 WRGCIPTMARAVVVNAAQLASYSQSKQFLLDSGYFSDNILCHFCASMISGLVTTAASMPV 859
WRGCIPTMARAVVVNAAQLASYSQSKQFLLDSGYFSDNILCHFCASMISGLVTTAASMPV
Sbjct: 181 WRGCIPTMARAVVVNAAQLASYSQSKQFLLDSGYFSDNILCHFCASMISGLVTTAASMPV 240
Query: 860 DIAKTRIQNMRTIDGKPEYKNGLDVLVKVIRYEGFFSLWKGFTPYYARLGPHTVLTFIFL 1039
DI KTRIQNMR IDGKPEYKNGLDVLVKV+RYEGFFSLWKGFTPYYARLGPHTVLTFIFL
Sbjct: 241 DIVKTRIQNMRMIDGKPEYKNGLDVLVKVVRYEGFFSLWKGFTPYYARLGPHTVLTFIFL 300
Query: 1040 EQMNKAYKRLFLS 1078
EQMNKAYKRLFLS
Sbjct: 301 EQMNKAYKRLFLS 313
>ref|XP_856284.1| PREDICTED: similar to Mitochondrial 2-oxoglutarate/malate carrier
protein (OGCP) isoform 2 [Canis familiaris].
Length = 263
Score = 481 bits (1237), Expect = e-136
Identities = 252/313 (80%), Positives = 255/313 (81%)
Frame = +2
Query: 140 MAATASPGAGGMDAKPRTSPKSVKFLFGGLAGMGATVFVQPLDLVKNRMQLSGEGAKTRE 319
MAATASPGAGG+D KPRTSPKSVKFLF
Sbjct: 1 MAATASPGAGGVDGKPRTSPKSVKFLF--------------------------------- 27
Query: 320 YKTSFHALTSILRAEGLRGIYTGLSAGLLRQATYTTTRLGIYTVLFERLTGADGTPPGFL 499
G GLSAGLLRQATYTTTRLGIYTVLFERLTGADGTPPGFL
Sbjct: 28 ------------------GGLAGLSAGLLRQATYTTTRLGIYTVLFERLTGADGTPPGFL 69
Query: 500 LKALIGMTAGATGAFVGTPAEVALIRMTADGRLPPDQRRGYKNVFDALIRIVREEGVPTL 679
LKALIGMTAGATGAFVGTPAEVALIRMTADGRLPPDQRRGYKNVF+ALIRI REEGVPTL
Sbjct: 70 LKALIGMTAGATGAFVGTPAEVALIRMTADGRLPPDQRRGYKNVFNALIRIAREEGVPTL 129
Query: 680 WRGCIPTMARAVVVNAAQLASYSQSKQFLLDSGYFSDNILCHFCASMISGLVTTAASMPV 859
WRGCIPTMARAVVVNAAQLASYSQSKQFLLDSGYFSDNILCHFCASMISGLVTTAASMPV
Sbjct: 130 WRGCIPTMARAVVVNAAQLASYSQSKQFLLDSGYFSDNILCHFCASMISGLVTTAASMPV 189
Query: 860 DIAKTRIQNMRTIDGKPEYKNGLDVLVKVIRYEGFFSLWKGFTPYYARLGPHTVLTFIFL 1039
DI KTRIQNMR IDGKPEYKNGLDVLVKV+RYEGFFSLWKGFTPYYARLGPHTVLTFIFL
Sbjct: 190 DIVKTRIQNMRMIDGKPEYKNGLDVLVKVVRYEGFFSLWKGFTPYYARLGPHTVLTFIFL 249
Query: 1040 EQMNKAYKRLFLS 1078
EQMNKAYKRLFLS
Sbjct: 250 EQMNKAYKRLFLS 262
>ref|XP_865863.1| PREDICTED: similar to Brain mitochondrial carrier protein-1 (BMCP-1)
(Mitochondrial uncoupling protein 5) (UCP 5) (Solute
carrier family 25, member 14) isoform 5 [Canis
familiaris].
Length = 325
Score = 191 bits (486), Expect = 1e-48
Identities = 115/309 (37%), Positives = 170/309 (55%), Gaps = 5/309 (1%)
Frame = +2
Query: 143 AATASPGAGGMDAKPRTSPKSVKFLFGGLAGMGATVFVQPLDLVKNRMQLSGEGAKTR-- 316
+AT S G++ KP F++GGLA + A P+DL K R+Q+ G+ R
Sbjct: 29 SATVSHEMSGLNWKP--------FVYGGLASIVAEFGTFPVDLTKTRLQVQGQSIDVRFK 80
Query: 317 --EYKTSFHALTSILRAEGLRGIYTGLSAGLLRQATYTTTRLGIYTVLFERLTGADGTPP 490
+Y+ FHAL I + EG+ +Y+G++ LLRQA+Y T ++GIY L +RL
Sbjct: 81 EIKYRGMFHALFRIYKEEGVLALYSGIAPALLRQASYGTIKIGIYQSL-KRLFVERLEDE 139
Query: 491 GFLLKALIGMTAGATGAFVGTPAEVALIRMTADGRLPPDQRRGYKNVFDALIRIVREEGV 670
L+ + G+ +G + + P +V IRM A G L G + I I ++EG
Sbjct: 140 TLLINMICGVVSGVISSTIANPTDVLKIRMQAQGSLFQGSMIG------SFIDIYQQEGT 193
Query: 671 PTLWRGCIPTMARAVVVNAAQLASYSQSKQFLLDSGYFSDNILCHFCASMISGLVTTAAS 850
LWRG +PT RA +V +L Y +K+ L+ SG D IL HF +S GL AS
Sbjct: 194 RGLWRGVVPTAQRAAIVVGVELPVYDITKKHLILSGVMGDTILTHFVSSFTCGLAGALAS 253
Query: 851 MPVDIAKTRIQNMRTIDGKPE-YKNGLDVLVKVIRYEGFFSLWKGFTPYYARLGPHTVLT 1027
PVD+ +TR+ N R I G + YK LD ++K+ ++EGFF+L+KGF P + RLGP ++
Sbjct: 254 NPVDVVRTRMMNQRAIVGHVDLYKGTLDGILKMWKHEGFFALYKGFWPNWLRLGPWNIIF 313
Query: 1028 FIFLEQMNK 1054
FI EQ+ +
Sbjct: 314 FITYEQLKR 322
>ref|XP_852497.1| PREDICTED: similar to Brain mitochondrial carrier protein-1 (BMCP-1)
(Mitochondrial uncoupling protein 5) (UCP 5) (Solute
carrier family 25, member 14) isoform 2 [Canis
familiaris].
Length = 325
Score = 191 bits (486), Expect = 1e-48
Identities = 115/309 (37%), Positives = 170/309 (55%), Gaps = 5/309 (1%)
Frame = +2
Query: 143 AATASPGAGGMDAKPRTSPKSVKFLFGGLAGMGATVFVQPLDLVKNRMQLSGEGAKTR-- 316
+AT S G++ KP F++GGLA + A P+DL K R+Q+ G+ R
Sbjct: 29 SATVSHEMSGLNWKP--------FVYGGLASIVAEFGTFPVDLTKTRLQVQGQSIDVRFK 80
Query: 317 --EYKTSFHALTSILRAEGLRGIYTGLSAGLLRQATYTTTRLGIYTVLFERLTGADGTPP 490
+Y+ FHAL I + EG+ +Y+G++ LLRQA+Y T ++GIY L +RL
Sbjct: 81 EIKYRGMFHALFRIYKEEGVLALYSGIAPALLRQASYGTIKIGIYQSL-KRLFVERLEDE 139
Query: 491 GFLLKALIGMTAGATGAFVGTPAEVALIRMTADGRLPPDQRRGYKNVFDALIRIVREEGV 670
L+ + G+ +G + + P +V IRM A G L G + I I ++EG
Sbjct: 140 TLLINMICGVVSGVISSTIANPTDVLKIRMQAQGSLFQGSMIG------SFIDIYQQEGT 193
Query: 671 PTLWRGCIPTMARAVVVNAAQLASYSQSKQFLLDSGYFSDNILCHFCASMISGLVTTAAS 850
LWRG +PT RA +V +L Y +K+ L+ SG D IL HF +S GL AS
Sbjct: 194 RGLWRGVVPTAQRAAIVVGVELPVYDITKKHLILSGVMGDTILTHFVSSFTCGLAGALAS 253
Query: 851 MPVDIAKTRIQNMRTIDGKPE-YKNGLDVLVKVIRYEGFFSLWKGFTPYYARLGPHTVLT 1027
PVD+ +TR+ N R I G + YK LD ++K+ ++EGFF+L+KGF P + RLGP ++
Sbjct: 254 NPVDVVRTRMMNQRAIVGHVDLYKGTLDGILKMWKHEGFFALYKGFWPNWLRLGPWNIIF 313
Query: 1028 FIFLEQMNK 1054
FI EQ+ +
Sbjct: 314 FITYEQLKR 322
>ref|NP_001003047.1| mitochondrial uncoupling protein 3 [Canis lupus familiaris].
Length = 311
Score = 172 bits (435), Expect = 9e-43
Identities = 101/303 (33%), Positives = 151/303 (49%), Gaps = 7/303 (2%)
Frame = +2
Query: 182 KPRTSPKS--VKFLFGGLAGMGATVFVQPLDLVKNRMQLSGEGAKTR-----EYKTSFHA 340
KP P + VKFL G A A + PLD K R+Q+ GE T+ +Y+
Sbjct: 5 KPSEVPPTTAVKFLGAGTAACFADLLTFPLDTAKVRLQIQGENQATQAARRIQYRGVLGT 64
Query: 341 LTSILRAEGLRGIYTGLSAGLLRQATYTTTRLGIYTVLFERLTGADGTPPGFLLKALIGM 520
+ +++R EG R Y GL AGL RQ ++ + R+G+Y + + T + L G
Sbjct: 65 ILTMVRTEGPRSPYNGLVAGLQRQMSFASIRIGLYDSVKQFYTPKGSDHSSITTRILAGC 124
Query: 521 TAGATGAFVGTPAEVALIRMTADGRLPPDQRRGYKNVFDALIRIVREEGVPTLWRGCIPT 700
T GA P +V +R A L R Y DA I REEGV LW+G +P
Sbjct: 125 TTGAMAVSCAQPTDVVKVRFQASIHLGAGSNRKYSGTMDAYRTIAREEGVRGLWKGTLPN 184
Query: 701 MARAVVVNAAQLASYSQSKQFLLDSGYFSDNILCHFCASMISGLVTTAASMPVDIAKTRI 880
+ R +VN A++ +Y K+ LLD +DN CH ++ +G T + PVD+ KTR
Sbjct: 185 ITRNAIVNCAEMVTYDIIKEKLLDYHLLTDNFPCHLISAFGAGFCATVVASPVDVVKTRY 244
Query: 881 QNMRTIDGKPEYKNGLDVLVKVIRYEGFFSLWKGFTPYYARLGPHTVLTFIFLEQMNKAY 1060
N +Y + LD ++K++ EG + +KGFTP + RLG V+ F+ EQ+ +A
Sbjct: 245 MN----SPPGQYCSPLDCMLKMVTQEGPTAFYKGFTPSFLRLGTWNVVMFVTYEQLKRAL 300
Query: 1061 KRL 1069
++
Sbjct: 301 MKV 303
>ref|XP_546609.2| PREDICTED: similar to solute carrier family 25, member 35 [Canis
familiaris].
Length = 300
Score = 162 bits (410), Expect = 7e-40
Identities = 106/297 (35%), Positives = 154/297 (51%), Gaps = 14/297 (4%)
Frame = +2
Query: 212 FLFGGLAGMGATVFVQPLDLVKNRMQLSGE----GAKTREYKTSFHALTSILRAEGLRGI 379
FL GLA GA VF PL++VK RMQL GE G R Y+ FHA +I R +GL +
Sbjct: 3 FLMSGLAACGACVFTNPLEVVKTRMQLQGELKAPGTYQRHYRNVFHAFITIGRVDGLAAL 62
Query: 380 YTGLSAGLLRQATYTTTRLGIYTVLFER--LTGADGT--PPGFLLKALIGMTAGATGAFV 547
GL+ LL Q RLG Y++ R L A+GT PP A G AG GA++
Sbjct: 63 QKGLAPALLYQFLMNGIRLGTYSLAEARGYLHTAEGTLSPPR---SAAAGALAGVMGAYL 119
Query: 548 GTPAEVALIRMTADGRLPPDQRRGYKN--VFDALIRIVREEGVPTLWRGCIPTMARAVVV 721
G+P + + A YK+ +F AL +I ++ G+ LWRG + + R ++
Sbjct: 120 GSPIYMVKTHLQAQAASEIAVGHQYKHQGMFQALSKIGQKHGLVGLWRGALGGLPRVIIG 179
Query: 722 NAAQLASYSQSKQFLLDSGYFS-DNILCHFCASMISGLVTTAASMPVDIAKTRIQNMRTI 898
++ QL ++S +K F+ F + A+M+SG+ A P D+A TR+ N T
Sbjct: 180 SSTQLCTFSSTKDFITQWEIFPPQSWKVALVAAMVSGIAVVLAMTPFDVASTRLYNQPT- 238
Query: 899 DGKPE---YKNGLDVLVKVIRYEGFFSLWKGFTPYYARLGPHTVLTFIFLEQMNKAY 1060
D + + Y+ LD L++ R EG F ++KG Y RLGPHT+L+ F +Q+ Y
Sbjct: 239 DARGKGLMYRGILDALLQTARTEGIFGMYKGIGASYFRLGPHTILSLFFWDQLRTLY 295
>ref|NP_001003048.1| mitochondrial uncoupling protein 2 [Canis lupus familiaris].
Length = 309
Score = 160 bits (405), Expect = 3e-39
Identities = 97/291 (33%), Positives = 150/291 (51%), Gaps = 6/291 (2%)
Frame = +2
Query: 203 SVKFLFGGLAGMGATVFVQPLDLVKNRMQLSGE------GAKTREYKTSFHALTSILRAE 364
+VKFL G A A + PLD K R+Q+ GE A + +Y+ + +++R E
Sbjct: 14 TVKFLGAGTAACIADLITFPLDTAKVRLQIQGERQGPVRAAASAQYRGVLCTILTMVRTE 73
Query: 365 GLRGIYTGLSAGLLRQATYTTTRLGIYTVLFERLTGADGTPPGFLLKALIGMTAGATGAF 544
G R +Y+GL AGL RQ ++ + R+G+Y + + T G + L G T GA
Sbjct: 74 GPRSLYSGLVAGLQRQMSFASVRIGLYDSVKQFYTKGS-EHAGIGSRLLAGSTTGALAVA 132
Query: 545 VGTPAEVALIRMTADGRLPPDQRRGYKNVFDALIRIVREEGVPTLWRGCIPTMARAVVVN 724
V P +V +R A R +R Y++ DA I REEG LW+G P +AR +VN
Sbjct: 133 VAQPTDVVKVRFQAQARAGSGRR--YQSTVDAYKTIAREEGFRGLWKGTSPNVARNAIVN 190
Query: 725 AAQLASYSQSKQFLLDSGYFSDNILCHFCASMISGLVTTAASMPVDIAKTRIQNMRTIDG 904
A+L +Y K LL + +D++ CHF ++ +G TT + PVD+ KTR N
Sbjct: 191 CAELVTYDLIKDALLKANLMTDDLPCHFTSAFGAGFCTTVIASPVDVVKTRYMN----SA 246
Query: 905 KPEYKNGLDVLVKVIRYEGFFSLWKGFTPYYARLGPHTVLTFIFLEQMNKA 1057
+Y + + +++ EG + +KGF P + RLG V+ F+ EQ+ +A
Sbjct: 247 LGQYSSAGHCALTMLQKEGPRAFYKGFMPSFLRLGSWNVVMFVTYEQLKRA 297
Score = 62.8 bits (151), Expect = 8e-10
Identities = 46/189 (24%), Positives = 77/189 (40%), Gaps = 2/189 (1%)
Frame = +2
Query: 209 KFLFGGLAGMGATVFVQPLDLVKNRMQLSGEGAKTREYKTSFHALTSILRAEGLRGIYTG 388
+ L G G A QP D+VK R Q R Y+++ A +I R EG RG++ G
Sbjct: 119 RLLAGSTTGALAVAVAQPTDVVKVRFQAQARAGSGRRYQSTVDAYKTIAREEGFRGLWKG 178
Query: 389 LSAGLLRQATYTTTRLGIYTVLFERLTGADGTPPGFLLKALIGMTAGATGAFVGTPAEVA 568
S + R A L Y ++ + L A+ AG + +P +V
Sbjct: 179 TSPNVARNAIVNCAELVTYDLIKDALLKANLMTDDLPCHFTSAFGAGFCTTVIASPVDVV 238
Query: 569 LIRM--TADGRLPPDQRRGYKNVFDALIRIVREEGVPTLWRGCIPTMARAVVVNAAQLAS 742
R +A G+ Y + + ++++EG ++G +P+ R N +
Sbjct: 239 KTRYMNSALGQ--------YSSAGHCALTMLQKEGPRAFYKGFMPSFLRLGSWNVVMFVT 290
Query: 743 YSQSKQFLL 769
Y Q K+ L+
Sbjct: 291 YEQLKRALM 299
>ref|XP_851381.1| PREDICTED: similar to solute carrier family 25, member 30 [Canis
familiaris].
Length = 510
Score = 160 bits (404), Expect = 4e-39
Identities = 97/277 (35%), Positives = 145/277 (52%), Gaps = 6/277 (2%)
Frame = +2
Query: 212 FLFGGLAGMGATVFVQPLDLVKNRMQLSGE----GAKTREYKTSFHALTSILRAEGLRGI 379
F++GGLA + A P+DL K R+Q+ G+ K Y+ HAL I R EGL+ +
Sbjct: 84 FVYGGLASITAECGTFPIDLTKTRLQIQGQTNDANFKEIRYRGMLHALVRIGREEGLKAL 143
Query: 380 YTGLSAGLLRQATYTTTRLGIYTVLFERLTGADGTPPGFLLKALIGMTAGATGAFVGTPA 559
Y+G++ +LRQA+Y T ++G Y L +RL L+ + G+ +G + + P
Sbjct: 144 YSGIAPAMLRQASYGTIKIGTYQSL-KRLFVEHPEDETLLINVVCGILSGVVSSTIANPT 202
Query: 560 EVALIRMTADGRLPPDQRRGYKNVFDALIRIVREEGVPTLWRGCIPTMARAVVVNAAQLA 739
+V IRM A G I I ++EG LW+G T RA +V +L
Sbjct: 203 DVLKIRMQAQSSTIQGGMIGN------FINIYQQEGARGLWKGVSLTAQRAAIVVGVELP 256
Query: 740 SYSQSKQFLLDSGYFSDNILCHFCASMISGLVTTAASMPVDIAKTRIQNMRTI-DGK-PE 913
Y +K+ L+ SG D + HF +S GL AS PVD+ +TR+ N R + DG+
Sbjct: 257 VYDLTKKHLILSGLMGDTVYTHFLSSFTCGLAGALASNPVDVVRTRMMNQRVLRDGRCSG 316
Query: 914 YKNGLDVLVKVIRYEGFFSLWKGFTPYYARLGPHTVL 1024
Y LD L++ + EGFF+L+KGF P + RLGP ++
Sbjct: 317 YTGTLDCLLQTWKNEGFFALYKGFWPNWLRLGPWNII 353
Score = 53.9 bits (128), Expect = 4e-07
Identities = 52/227 (22%), Positives = 84/227 (37%), Gaps = 10/227 (4%)
Frame = +2
Query: 59 LLRAQCHLGRERGRARTGPGAEGH*VAMAATASPGAGGMDA-------KPRTSPKSVKFL 217
+L A +GRE G G + A+ + G + P + +
Sbjct: 127 MLHALVRIGREEGLKALYSGIAPAMLRQASYGTIKIGTYQSLKRLFVEHPEDETLLINVV 186
Query: 218 FGGLAGMGATVFVQPLDLVKNRMQLSG---EGAKTREYKTSFHALTSILRAEGLRGIYTG 388
G L+G+ ++ P D++K RMQ +G + +I + EG RG++ G
Sbjct: 187 CGILSGVVSSTIANPTDVLKIRMQAQSSTIQGGMIGNF-------INIYQQEGARGLWKG 239
Query: 389 LSAGLLRQATYTTTRLGIYTVLFERLTGADGTPPGFLLKALIGMTAGATGAFVGTPAEVA 568
+S R A L +Y + + L + L T G GA P +V
Sbjct: 240 VSLTAQRAAIVVGVELPVYDLTKKHLILSGLMGDTVYTHFLSSFTCGLAGALASNPVDVV 299
Query: 569 LIRMTADGRLPPDQRRGYKNVFDALIRIVREEGVPTLWRGCIPTMAR 709
RM L + GY D L++ + EG L++G P R
Sbjct: 300 RTRMMNQRVLRDGRCSGYTGTLDCLLQTWKNEGFFALYKGFWPNWLR 346
>ref|XP_865850.1| PREDICTED: similar to Brain mitochondrial carrier protein-1 (BMCP-1)
(Mitochondrial uncoupling protein 5) (UCP 5) (Solute
carrier family 25, member 14) isoform 4 [Canis
familiaris].
Length = 290
Score = 159 bits (402), Expect = 6e-39
Identities = 100/299 (33%), Positives = 152/299 (50%), Gaps = 5/299 (1%)
Frame = +2
Query: 143 AATASPGAGGMDAKPRTSPKSVKFLFGGLAGMGATVFVQPLDLVKNRMQLSGEGAKTR-- 316
+AT S G++ KP F++GGLA + A P+DL K R+Q+ G+ R
Sbjct: 29 SATVSHEMSGLNWKP--------FVYGGLASIVAEFGTFPVDLTKTRLQVQGQSIDVRFK 80
Query: 317 --EYKTSFHALTSILRAEGLRGIYTGLSAGLLRQATYTTTRLGIYTVLFERLTGADGTPP 490
+Y+ FHAL I + EG+ +Y+G++ LLRQA+Y T ++GIY L +RL
Sbjct: 81 EIKYRGMFHALFRIYKEEGVLALYSGIAPALLRQASYGTIKIGIYQSL-KRLFVERLEDE 139
Query: 491 GFLLKALIGMTAGATGAFVGTPAEVALIRMTADGRLPPDQRRGYKNVFDALIRIVREEGV 670
L+ + G+ +G + + P +V +R+T G
Sbjct: 140 TLLINMICGVVSGVISSTIANPTDVLKVRLTVVG-------------------------- 173
Query: 671 PTLWRGCIPTMARAVVVNAAQLASYSQSKQFLLDSGYFSDNILCHFCASMISGLVTTAAS 850
G +PT RA +V +L Y +K+ L+ SG D IL HF +S GL AS
Sbjct: 174 -----GVVPTAQRAAIVVGVELPVYDITKKHLILSGVMGDTILTHFVSSFTCGLAGALAS 228
Query: 851 MPVDIAKTRIQNMRTIDGKPE-YKNGLDVLVKVIRYEGFFSLWKGFTPYYARLGPHTVL 1024
PVD+ +TR+ N R I G + YK LD ++K+ ++EGFF+L+KGF P + RLGP ++
Sbjct: 229 NPVDVVRTRMMNQRAIVGHVDLYKGTLDGILKMWKHEGFFALYKGFWPNWLRLGPWNII 287
>ref|NP_001003046.1| mitochondrial brown fat uncoupling protein 1 [Canis lupus
familiaris].
Length = 309
Score = 159 bits (401), Expect = 8e-39
Identities = 93/301 (30%), Positives = 151/301 (50%), Gaps = 4/301 (1%)
Frame = +2
Query: 164 AGGMDAKPRTSPKSVKFLFGGLAGMGATVFVQPLDLVKNRMQLSGEGA----KTREYKTS 331
A G DA P S V+ A A + PLD K R+Q+ GEG + Y+
Sbjct: 4 APGSDAPPTLS---VRIAAAAGAACLADMITFPLDTAKVRLQIQGEGQGQPPRAPRYRGV 60
Query: 332 FHALTSILRAEGLRGIYTGLSAGLLRQATYTTTRLGIYTVLFERLTGADGTPPGFLLKAL 511
+ ++ R EGL+ +Y+GL AGL RQ + + R+G+Y + E L+ G +
Sbjct: 61 LGTVATLARTEGLQKLYSGLPAGLQRQVGFASLRIGLYDSVREWLSPGQGAAASLGSRIS 120
Query: 512 IGMTAGATGAFVGTPAEVALIRMTADGRLPPDQRRGYKNVFDALIRIVREEGVPTLWRGC 691
G+ G F+G P EV +R+ A L + R Y ++A I EG+ LW+G
Sbjct: 121 AGVMTGGAAVFIGQPTEVVKVRLQAQSHLHGRKPR-YTGTYNAYRIIATTEGLTGLWKGT 179
Query: 692 IPTMARAVVVNAAQLASYSQSKQFLLDSGYFSDNILCHFCASMISGLVTTAASMPVDIAK 871
P + R V++N +L +Y K+ L+ + +D++ CHF +++++G TT S PVD+ K
Sbjct: 180 TPNLMRNVIINCTELVTYDLMKEALVKNHLLADDLPCHFLSALVAGFCTTVLSSPVDVVK 239
Query: 872 TRIQNMRTIDGKPEYKNGLDVLVKVIRYEGFFSLWKGFTPYYARLGPHTVLTFIFLEQMN 1051
TR N +Y + + + ++ EG + +KGF P + RLG V+ F+ EQ+
Sbjct: 240 TRFVN----SVPEQYTSVPNCAMTMLTKEGPLAFFKGFVPSFLRLGSWNVIMFVCFEQLK 295
Query: 1052 K 1054
+
Sbjct: 296 R 296
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 59,958,185
Number of extensions: 1784052
Number of successful extensions: 7960
Number of sequences better than 1.0e-05: 80
Number of HSP's gapped: 7651
Number of HSP's successfully gapped: 148
Length of query: 476
Length of database: 18,874,504
Length adjustment: 107
Effective length of query: 369
Effective length of database: 15,307,552
Effective search space: 5648486688
Effective search space used: 5648486688
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002235
(1428 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_003553.2| mitochondrial 2-oxoglutarate/malate carrier pro... 598 e-171
Alignment gi|NP_001158889.1| mitochondrial 2-oxoglutarate/malate carrier ... 568 e-162
Alignment gi|NP_001158890.1| mitochondrial 2-oxoglutarate/malate carrier ... 469 e-132
Alignment gi|NP_036272.2| mitochondrial dicarboxylate carrier [Homo sapie... 201 2e-51
Alignment gi|NP_003942.1| brain mitochondrial carrier protein 1 isoform U... 189 7e-48
Alignment gi|NP_073721.1| brain mitochondrial carrier protein 1 isoform U... 189 7e-48
Alignment gi|NP_068605.1| mitochondrial brown fat uncoupling protein 1 [H... 169 4e-42
Alignment gi|NP_003347.1| mitochondrial uncoupling protein 3 isoform UCP3... 169 8e-42
Alignment gi|NP_001010875.1| kidney mitochondrial carrier protein 1 [Homo... 164 1e-40
Alignment gi|NP_003346.2| mitochondrial uncoupling protein 2 [Homo sapien... 157 3e-38
>ref|NP_003553.2| mitochondrial 2-oxoglutarate/malate carrier protein isoform 1 [Homo
sapiens].
Length = 314
Score = 598 bits (1541), Expect = e-171
Identities = 301/313 (96%), Positives = 306/313 (97%)
Frame = +2
Query: 140 MAATASPGAGGMDAKPRTSPKSVKFLFGGLAGMGATVFVQPLDLVKNRMQLSGEGAKTRE 319
MAATAS GAGG+D KPRTSPKSVKFLFGGLAGMGATVFVQPLDLVKNRMQLSGEGAKTRE
Sbjct: 1 MAATASAGAGGIDGKPRTSPKSVKFLFGGLAGMGATVFVQPLDLVKNRMQLSGEGAKTRE 60
Query: 320 YKTSFHALTSILRAEGLRGIYTGLSAGLLRQATYTTTRLGIYTVLFERLTGADGTPPGFL 499
YKTSFHALTSIL+AEGLRGIYTGLSAGLLRQATYTTTRLGIYTVLFERLTGADGTPPGFL
Sbjct: 61 YKTSFHALTSILKAEGLRGIYTGLSAGLLRQATYTTTRLGIYTVLFERLTGADGTPPGFL 120
Query: 500 LKALIGMTAGATGAFVGTPAEVALIRMTADGRLPPDQRRGYKNVFDALIRIVREEGVPTL 679
LKA+IGMTAGATGAFVGTPAEVALIRMTADGRLP DQRRGYKNVF+ALIRI REEGV TL
Sbjct: 121 LKAVIGMTAGATGAFVGTPAEVALIRMTADGRLPADQRRGYKNVFNALIRITREEGVLTL 180
Query: 680 WRGCIPTMARAVVVNAAQLASYSQSKQFLLDSGYFSDNILCHFCASMISGLVTTAASMPV 859
WRGCIPTMARAVVVNAAQLASYSQSKQFLLDSGYFSDNILCHFCASMISGLVTTAASMPV
Sbjct: 181 WRGCIPTMARAVVVNAAQLASYSQSKQFLLDSGYFSDNILCHFCASMISGLVTTAASMPV 240
Query: 860 DIAKTRIQNMRTIDGKPEYKNGLDVLVKVIRYEGFFSLWKGFTPYYARLGPHTVLTFIFL 1039
DIAKTRIQNMR IDGKPEYKNGLDVL KV+RYEGFFSLWKGFTPYYARLGPHTVLTFIFL
Sbjct: 241 DIAKTRIQNMRMIDGKPEYKNGLDVLFKVVRYEGFFSLWKGFTPYYARLGPHTVLTFIFL 300
Query: 1040 EQMNKAYKRLFLS 1078
EQMNKAYKRLFLS
Sbjct: 301 EQMNKAYKRLFLS 313
>ref|NP_001158889.1| mitochondrial 2-oxoglutarate/malate carrier protein isoform 2 [Homo
sapiens].
Length = 303
Score = 568 bits (1464), Expect = e-162
Identities = 290/313 (92%), Positives = 295/313 (94%)
Frame = +2
Query: 140 MAATASPGAGGMDAKPRTSPKSVKFLFGGLAGMGATVFVQPLDLVKNRMQLSGEGAKTRE 319
MAATAS GAGG+D KPRTSPK MGATVFVQPLDLVKNRMQLSGEGAKTRE
Sbjct: 1 MAATASAGAGGIDGKPRTSPK-----------MGATVFVQPLDLVKNRMQLSGEGAKTRE 49
Query: 320 YKTSFHALTSILRAEGLRGIYTGLSAGLLRQATYTTTRLGIYTVLFERLTGADGTPPGFL 499
YKTSFHALTSIL+AEGLRGIYTGLSAGLLRQATYTTTRLGIYTVLFERLTGADGTPPGFL
Sbjct: 50 YKTSFHALTSILKAEGLRGIYTGLSAGLLRQATYTTTRLGIYTVLFERLTGADGTPPGFL 109
Query: 500 LKALIGMTAGATGAFVGTPAEVALIRMTADGRLPPDQRRGYKNVFDALIRIVREEGVPTL 679
LKA+IGMTAGATGAFVGTPAEVALIRMTADGRLP DQRRGYKNVF+ALIRI REEGV TL
Sbjct: 110 LKAVIGMTAGATGAFVGTPAEVALIRMTADGRLPADQRRGYKNVFNALIRITREEGVLTL 169
Query: 680 WRGCIPTMARAVVVNAAQLASYSQSKQFLLDSGYFSDNILCHFCASMISGLVTTAASMPV 859
WRGCIPTMARAVVVNAAQLASYSQSKQFLLDSGYFSDNILCHFCASMISGLVTTAASMPV
Sbjct: 170 WRGCIPTMARAVVVNAAQLASYSQSKQFLLDSGYFSDNILCHFCASMISGLVTTAASMPV 229
Query: 860 DIAKTRIQNMRTIDGKPEYKNGLDVLVKVIRYEGFFSLWKGFTPYYARLGPHTVLTFIFL 1039
DIAKTRIQNMR IDGKPEYKNGLDVL KV+RYEGFFSLWKGFTPYYARLGPHTVLTFIFL
Sbjct: 230 DIAKTRIQNMRMIDGKPEYKNGLDVLFKVVRYEGFFSLWKGFTPYYARLGPHTVLTFIFL 289
Query: 1040 EQMNKAYKRLFLS 1078
EQMNKAYKRLFLS
Sbjct: 290 EQMNKAYKRLFLS 302
>ref|NP_001158890.1| mitochondrial 2-oxoglutarate/malate carrier protein isoform 3 [Homo
sapiens].
Length = 263
Score = 469 bits (1207), Expect = e-132
Identities = 248/313 (79%), Positives = 252/313 (80%)
Frame = +2
Query: 140 MAATASPGAGGMDAKPRTSPKSVKFLFGGLAGMGATVFVQPLDLVKNRMQLSGEGAKTRE 319
MAATAS GAGG+D KPRTSPKSVKFLF
Sbjct: 1 MAATASAGAGGIDGKPRTSPKSVKFLF--------------------------------- 27
Query: 320 YKTSFHALTSILRAEGLRGIYTGLSAGLLRQATYTTTRLGIYTVLFERLTGADGTPPGFL 499
G GLSAGLLRQATYTTTRLGIYTVLFERLTGADGTPPGFL
Sbjct: 28 ------------------GGLAGLSAGLLRQATYTTTRLGIYTVLFERLTGADGTPPGFL 69
Query: 500 LKALIGMTAGATGAFVGTPAEVALIRMTADGRLPPDQRRGYKNVFDALIRIVREEGVPTL 679
LKA+IGMTAGATGAFVGTPAEVALIRMTADGRLP DQRRGYKNVF+ALIRI REEGV TL
Sbjct: 70 LKAVIGMTAGATGAFVGTPAEVALIRMTADGRLPADQRRGYKNVFNALIRITREEGVLTL 129
Query: 680 WRGCIPTMARAVVVNAAQLASYSQSKQFLLDSGYFSDNILCHFCASMISGLVTTAASMPV 859
WRGCIPTMARAVVVNAAQLASYSQSKQFLLDSGYFSDNILCHFCASMISGLVTTAASMPV
Sbjct: 130 WRGCIPTMARAVVVNAAQLASYSQSKQFLLDSGYFSDNILCHFCASMISGLVTTAASMPV 189
Query: 860 DIAKTRIQNMRTIDGKPEYKNGLDVLVKVIRYEGFFSLWKGFTPYYARLGPHTVLTFIFL 1039
DIAKTRIQNMR IDGKPEYKNGLDVL KV+RYEGFFSLWKGFTPYYARLGPHTVLTFIFL
Sbjct: 190 DIAKTRIQNMRMIDGKPEYKNGLDVLFKVVRYEGFFSLWKGFTPYYARLGPHTVLTFIFL 249
Query: 1040 EQMNKAYKRLFLS 1078
EQMNKAYKRLFLS
Sbjct: 250 EQMNKAYKRLFLS 262
>ref|NP_036272.2| mitochondrial dicarboxylate carrier [Homo sapiens].
Length = 287
Score = 201 bits (510), Expect = 2e-51
Identities = 118/296 (39%), Positives = 162/296 (54%)
Frame = +2
Query: 173 MDAKPRTSPKSVKFLFGGLAGMGATVFVQPLDLVKNRMQLSGEGAKTREYKTSFHALTSI 352
M A+ R S ++ FGGLA GA PLDL+K +Q E K R + +
Sbjct: 1 MAAEARVS----RWYFGGLASCGAACCTHPLDLLKVHLQTQQE-VKLRMTGMALR----V 51
Query: 353 LRAEGLRGIYTGLSAGLLRQATYTTTRLGIYTVLFERLTGADGTPPGFLLKALIGMTAGA 532
+R +G+ +Y+GLSA L RQ TY+ TR IY + +R+ P F K L+G +G
Sbjct: 52 VRTDGILALYSGLSASLCRQMTYSLTRFAIYETVRDRVAKGSQGPLPFHEKVLLGSVSGL 111
Query: 533 TGAFVGTPAEVALIRMTADGRLPPDQRRGYKNVFDALIRIVREEGVPTLWRGCIPTMARA 712
G FVGTPA++ +RM D +LP QRR Y + D L R+ REEG+ L+ G +R
Sbjct: 112 AGGFVGTPADLVNVRMQNDVKLPQGQRRNYAHALDGLYRVAREEGLRRLFSGATMASSRG 171
Query: 713 VVVNAAQLASYSQSKQFLLDSGYFSDNILCHFCASMISGLVTTAASMPVDIAKTRIQNMR 892
+V QL+ Y Q+KQ +L +GY SDNI HF AS I+G T P+D+ KTR+ N
Sbjct: 172 ALVTVGQLSCYDQAKQLVLSTGYLSDNIFTHFVASFIAGGCATFLCQPLDVLKTRLMN-- 229
Query: 893 TIDGKPEYKNGLDVLVKVIRYEGFFSLWKGFTPYYARLGPHTVLTFIFLEQMNKAY 1060
K EY+ V+ + G + +KG P RL PHTVLTF+FLEQ+ K +
Sbjct: 230 ---SKGEYQGVFHCAVETAKL-GPLAFYKGLVPAGIRLIPHTVLTFVFLEQLRKNF 281
>ref|NP_003942.1| brain mitochondrial carrier protein 1 isoform UCP5L [Homo sapiens].
Length = 325
Score = 189 bits (479), Expect = 7e-48
Identities = 113/309 (36%), Positives = 169/309 (54%), Gaps = 5/309 (1%)
Frame = +2
Query: 143 AATASPGAGGMDAKPRTSPKSVKFLFGGLAGMGATVFVQPLDLVKNRMQLSGEGAKTR-- 316
+ T S G++ KP F++GGLA + A P+DL K R+Q+ G+ R
Sbjct: 29 STTVSHEMSGLNWKP--------FVYGGLASIVAEFGTFPVDLTKTRLQVQGQSIDARFK 80
Query: 317 --EYKTSFHALTSILRAEGLRGIYTGLSAGLLRQATYTTTRLGIYTVLFERLTGADGTPP 490
+Y+ FHAL I + EG+ +Y+G++ LLRQA+Y T ++GIY L +RL
Sbjct: 81 EIKYRGMFHALFRICKEEGVLALYSGIAPALLRQASYGTIKIGIYQSL-KRLFVERLEDE 139
Query: 491 GFLLKALIGMTAGATGAFVGTPAEVALIRMTADGRLPPDQRRGYKNVFDALIRIVREEGV 670
L+ + G+ +G + + P +V IRM A G L G + I I ++EG
Sbjct: 140 TLLINMICGVVSGVISSTIANPTDVLKIRMQAQGSLFQGSMIG------SFIDIYQQEGT 193
Query: 671 PTLWRGCIPTMARAVVVNAAQLASYSQSKQFLLDSGYFSDNILCHFCASMISGLVTTAAS 850
LWRG +PT RA +V +L Y +K+ L+ SG D IL HF +S GL AS
Sbjct: 194 RGLWRGVVPTAQRAAIVVGVELPVYDITKKHLILSGMMGDTILTHFVSSFTCGLAGALAS 253
Query: 851 MPVDIAKTRIQNMRTIDGKPE-YKNGLDVLVKVIRYEGFFSLWKGFTPYYARLGPHTVLT 1027
PVD+ +TR+ N R I G + YK +D ++K+ ++EGFF+L+KGF P + RLGP ++
Sbjct: 254 NPVDVVRTRMMNQRAIVGHVDLYKGTVDGILKMWKHEGFFALYKGFWPNWLRLGPWNIIF 313
Query: 1028 FIFLEQMNK 1054
FI EQ+ +
Sbjct: 314 FITYEQLKR 322
>ref|NP_073721.1| brain mitochondrial carrier protein 1 isoform UCP5S [Homo sapiens].
Length = 322
Score = 189 bits (479), Expect = 7e-48
Identities = 113/309 (36%), Positives = 169/309 (54%), Gaps = 5/309 (1%)
Frame = +2
Query: 143 AATASPGAGGMDAKPRTSPKSVKFLFGGLAGMGATVFVQPLDLVKNRMQLSGEGAKTR-- 316
+ T S G++ KP F++GGLA + A P+DL K R+Q+ G+ R
Sbjct: 26 STTVSHEMSGLNWKP--------FVYGGLASIVAEFGTFPVDLTKTRLQVQGQSIDARFK 77
Query: 317 --EYKTSFHALTSILRAEGLRGIYTGLSAGLLRQATYTTTRLGIYTVLFERLTGADGTPP 490
+Y+ FHAL I + EG+ +Y+G++ LLRQA+Y T ++GIY L +RL
Sbjct: 78 EIKYRGMFHALFRICKEEGVLALYSGIAPALLRQASYGTIKIGIYQSL-KRLFVERLEDE 136
Query: 491 GFLLKALIGMTAGATGAFVGTPAEVALIRMTADGRLPPDQRRGYKNVFDALIRIVREEGV 670
L+ + G+ +G + + P +V IRM A G L G + I I ++EG
Sbjct: 137 TLLINMICGVVSGVISSTIANPTDVLKIRMQAQGSLFQGSMIG------SFIDIYQQEGT 190
Query: 671 PTLWRGCIPTMARAVVVNAAQLASYSQSKQFLLDSGYFSDNILCHFCASMISGLVTTAAS 850
LWRG +PT RA +V +L Y +K+ L+ SG D IL HF +S GL AS
Sbjct: 191 RGLWRGVVPTAQRAAIVVGVELPVYDITKKHLILSGMMGDTILTHFVSSFTCGLAGALAS 250
Query: 851 MPVDIAKTRIQNMRTIDGKPE-YKNGLDVLVKVIRYEGFFSLWKGFTPYYARLGPHTVLT 1027
PVD+ +TR+ N R I G + YK +D ++K+ ++EGFF+L+KGF P + RLGP ++
Sbjct: 251 NPVDVVRTRMMNQRAIVGHVDLYKGTVDGILKMWKHEGFFALYKGFWPNWLRLGPWNIIF 310
Query: 1028 FIFLEQMNK 1054
FI EQ+ +
Sbjct: 311 FITYEQLKR 319
>ref|NP_068605.1| mitochondrial brown fat uncoupling protein 1 [Homo sapiens].
Length = 307
Score = 169 bits (429), Expect = 4e-42
Identities = 97/298 (32%), Positives = 152/298 (51%), Gaps = 2/298 (0%)
Frame = +2
Query: 167 GGMDAKPRTSPKSVKFLFGGLAGMGATVFVQPLDLVKNRMQLSGE--GAKTREYKTSFHA 340
GG+ A V+ G+A A V PLD K R+Q+ GE + YK
Sbjct: 2 GGLTASDVHPTLGVQLFSAGIAACLADVITFPLDTAKVRLQVQGECPTSSVIRYKGVLGT 61
Query: 341 LTSILRAEGLRGIYTGLSAGLLRQATYTTTRLGIYTVLFERLTGADGTPPGFLLKALIGM 520
+T++++ EG +Y+GL AGL RQ + + R+G+Y + E LT T P K L G+
Sbjct: 62 ITAVVKTEGRMKLYSGLPAGLQRQISSASLRIGLYDTVQEFLTAGKETAPSLGSKILAGL 121
Query: 521 TAGATGAFVGTPAEVALIRMTADGRLPPDQRRGYKNVFDALIRIVREEGVPTLWRGCIPT 700
T G F+G P EV +R+ A L + R Y ++A I EG+ LW+G P
Sbjct: 122 TTGGVAVFIGQPTEVVKVRLQAQSHLHGIKPR-YTGTYNAYRIIATTEGLTGLWKGTTPN 180
Query: 701 MARAVVVNAAQLASYSQSKQFLLDSGYFSDNILCHFCASMISGLVTTAASMPVDIAKTRI 880
+ R+V++N +L +Y K+ + + +D++ CH +++I+G TA S PVD+ KTR
Sbjct: 181 LMRSVIINCTELVTYDLMKEAFVKNNILADDVPCHLVSALIAGFCATAMSSPVDVVKTRF 240
Query: 881 QNMRTIDGKPEYKNGLDVLVKVIRYEGFFSLWKGFTPYYARLGPHTVLTFIFLEQMNK 1054
N +YK+ + +KV EG + +KG P + RLG V+ F+ EQ+ +
Sbjct: 241 IN----SPPGQYKSVPNCAMKVFTNEGPTAFFKGLVPSFLRLGSWNVIMFVCFEQLKR 294
>ref|NP_003347.1| mitochondrial uncoupling protein 3 isoform UCP3L [Homo sapiens].
Length = 312
Score = 169 bits (427), Expect = 8e-42
Identities = 102/304 (33%), Positives = 153/304 (50%), Gaps = 8/304 (2%)
Frame = +2
Query: 182 KPRTSPKS--VKFLFGGLAGMGATVFVQPLDLVKNRMQLSGEG-----AKTREYKTSFHA 340
KP P + VKFL G A A + PLD K R+Q+ GE A+ +Y+
Sbjct: 5 KPSDVPPTMAVKFLGAGTAACFADLVTFPLDTAKVRLQIQGENQAVQTARLVQYRGVLGT 64
Query: 341 LTSILRAEGLRGIYTGLSAGLLRQATYTTTRLGIYTVLFERLTGADGTPPGFLLKALIGM 520
+ +++R EG Y GL AGL RQ ++ + R+G+Y + + T + L G
Sbjct: 65 ILTMVRTEGPCSPYNGLVAGLQRQMSFASIRIGLYDSVKQVYTPKGADNSSLTTRILAGC 124
Query: 521 TAGATGAFVGTPAEVALIRMTADGRLPPDQR-RGYKNVFDALIRIVREEGVPTLWRGCIP 697
T GA P +V +R A L P + R Y DA I REEGV LW+G +P
Sbjct: 125 TTGAMAVTCAQPTDVVKVRFQASIHLGPSRSDRKYSGTMDAYRTIAREEGVRGLWKGTLP 184
Query: 698 TMARAVVVNAAQLASYSQSKQFLLDSGYFSDNILCHFCASMISGLVTTAASMPVDIAKTR 877
+ R +VN A++ +Y K+ LLD +DN CHF ++ +G T + PVD+ KTR
Sbjct: 185 NIMRNAIVNCAEVVTYDILKEKLLDYHLLTDNFPCHFVSAFGAGFCATVVASPVDVVKTR 244
Query: 878 IQNMRTIDGKPEYKNGLDVLVKVIRYEGFFSLWKGFTPYYARLGPHTVLTFIFLEQMNKA 1057
N +Y + LD ++K++ EG + +KGFTP + RLG V+ F+ EQ+ +A
Sbjct: 245 YMN----SPPGQYFSPLDCMIKMVAQEGPTAFYKGFTPSFLRLGSWNVVMFVTYEQLKRA 300
Query: 1058 YKRL 1069
++
Sbjct: 301 LMKV 304
>ref|NP_001010875.1| kidney mitochondrial carrier protein 1 [Homo sapiens].
Length = 291
Score = 164 bits (416), Expect = 1e-40
Identities = 101/287 (35%), Positives = 153/287 (53%), Gaps = 6/287 (2%)
Frame = +2
Query: 212 FLFGGLAGMGATVFVQPLDLVKNRMQLSGE--GAKTRE--YKTSFHALTSILRAEGLRGI 379
F++GGLA + A P+DL K R+Q+ G+ AK +E Y+ HAL I R EGL+ +
Sbjct: 9 FVYGGLASITAECGTFPIDLTKTRLQIQGQTNDAKFKEIRYRGMLHALVRIGREEGLKAL 68
Query: 380 YTGLSAGLLRQATYTTTRLGIYTVLFERLTGADGTPPGFLLKALIGMTAGATGAFVGTPA 559
Y+G++ +LRQA+Y T ++G Y L +RL + + G+ +G + + P
Sbjct: 69 YSGIAPAMLRQASYGTIKIGTYQSL-KRLFIERPEDETLPINVICGILSGVISSTIANPT 127
Query: 560 EVALIRMTADGRLPPDQRRGYKNVFDALIRIVREEGVPTLWRGCIPTMARAVVVNAAQLA 739
+V IRM A G + I ++EG LW+G T RA +V +L
Sbjct: 128 DVLKIRMQAQSNTIQGGMIGN------FMNIYQQEGTRGLWKGVSLTAQRAAIVVGVELP 181
Query: 740 SYSQSKQFLLDSGYFSDNILCHFCASMISGLVTTAASMPVDIAKTRIQNMRTI-DGK-PE 913
Y +K+ L+ SG D + HF +S GL AS PVD+ +TR+ N R + DG+
Sbjct: 182 VYDITKKHLILSGLMGDTVYTHFLSSFTCGLAGALASNPVDVVRTRMMNQRVLRDGRCSG 241
Query: 914 YKNGLDVLVKVIRYEGFFSLWKGFTPYYARLGPHTVLTFIFLEQMNK 1054
Y LD L++ + EGFF+L+KGF P + RLGP ++ F+ EQ+ K
Sbjct: 242 YTGTLDCLLQTWKNEGFFALYKGFWPNWLRLGPWNIIFFVTYEQLKK 288
Score = 59.7 bits (143), Expect = 7e-09
Identities = 56/244 (22%), Positives = 91/244 (37%), Gaps = 10/244 (4%)
Frame = +2
Query: 59 LLRAQCHLGRERGRARTGPGAEGH*VAMAATASPGAGGMDA-------KPRTSPKSVKFL 217
+L A +GRE G G + A+ + G + +P + +
Sbjct: 52 MLHALVRIGREEGLKALYSGIAPAMLRQASYGTIKIGTYQSLKRLFIERPEDETLPINVI 111
Query: 218 FGGLAGMGATVFVQPLDLVKNRMQLSG---EGAKTREYKTSFHALTSILRAEGLRGIYTG 388
G L+G+ ++ P D++K RMQ +G + +I + EG RG++ G
Sbjct: 112 CGILSGVISSTIANPTDVLKIRMQAQSNTIQGGMIGNF-------MNIYQQEGTRGLWKG 164
Query: 389 LSAGLLRQATYTTTRLGIYTVLFERLTGADGTPPGFLLKALIGMTAGATGAFVGTPAEVA 568
+S R A L +Y + + L + L T G GA P +V
Sbjct: 165 VSLTAQRAAIVVGVELPVYDITKKHLILSGLMGDTVYTHFLSSFTCGLAGALASNPVDVV 224
Query: 569 LIRMTADGRLPPDQRRGYKNVFDALIRIVREEGVPTLWRGCIPTMARAVVVNAAQLASYS 748
RM L + GY D L++ + EG L++G P R N +Y
Sbjct: 225 RTRMMNQRVLRDGRCSGYTGTLDCLLQTWKNEGFFALYKGFWPNWLRLGPWNIIFFVTYE 284
Query: 749 QSKQ 760
Q K+
Sbjct: 285 QLKK 288
>ref|NP_003346.2| mitochondrial uncoupling protein 2 [Homo sapiens].
Length = 309
Score = 157 bits (396), Expect = 3e-38
Identities = 97/292 (33%), Positives = 151/292 (51%), Gaps = 7/292 (2%)
Frame = +2
Query: 203 SVKFLFGGLAGMGATVFVQPLDLVKNRMQLSGEG------AKTREYKTSFHALTSILRAE 364
+VKFL G A A + PLD K R+Q+ GE + +Y+ + +++R E
Sbjct: 14 TVKFLGAGTAACIADLITFPLDTAKVRLQIQGESQGPVRATASAQYRGVMGTILTMVRTE 73
Query: 365 GLRGIYTGLSAGLLRQATYTTTRLGIYTVLFERLT-GADGTPPGFLLKALIGMTAGATGA 541
G R +Y GL AGL RQ ++ + R+G+Y + + T G++ G L L G T GA
Sbjct: 74 GPRSLYNGLVAGLQRQMSFASVRIGLYDSVKQFYTKGSEHASIGSRL--LAGSTTGALAV 131
Query: 542 FVGTPAEVALIRMTADGRLPPDQRRGYKNVFDALIRIVREEGVPTLWRGCIPTMARAVVV 721
V P +V +R A R +R Y++ +A I REEG LW+G P +AR +V
Sbjct: 132 AVAQPTDVVKVRFQAQARAGGGRR--YQSTVNAYKTIAREEGFRGLWKGTSPNVARNAIV 189
Query: 722 NAAQLASYSQSKQFLLDSGYFSDNILCHFCASMISGLVTTAASMPVDIAKTRIQNMRTID 901
N A+L +Y K LL + +D++ CHF ++ +G TT + PVD+ KTR N
Sbjct: 190 NCAELVTYDLIKDALLKANLMTDDLPCHFTSAFGAGFCTTVIASPVDVVKTRYMN----S 245
Query: 902 GKPEYKNGLDVLVKVIRYEGFFSLWKGFTPYYARLGPHTVLTFIFLEQMNKA 1057
+Y + + +++ EG + +KGF P + RLG V+ F+ EQ+ +A
Sbjct: 246 ALGQYSSAGHCALTMLQKEGPRAFYKGFMPSFLRLGSWNVVMFVTYEQLKRA 297
Score = 62.8 bits (151), Expect = 8e-10
Identities = 46/189 (24%), Positives = 78/189 (41%), Gaps = 2/189 (1%)
Frame = +2
Query: 209 KFLFGGLAGMGATVFVQPLDLVKNRMQLSGEGAKTREYKTSFHALTSILRAEGLRGIYTG 388
+ L G G A QP D+VK R Q R Y+++ +A +I R EG RG++ G
Sbjct: 119 RLLAGSTTGALAVAVAQPTDVVKVRFQAQARAGGGRRYQSTVNAYKTIAREEGFRGLWKG 178
Query: 389 LSAGLLRQATYTTTRLGIYTVLFERLTGADGTPPGFLLKALIGMTAGATGAFVGTPAEVA 568
S + R A L Y ++ + L A+ AG + +P +V
Sbjct: 179 TSPNVARNAIVNCAELVTYDLIKDALLKANLMTDDLPCHFTSAFGAGFCTTVIASPVDVV 238
Query: 569 LIRM--TADGRLPPDQRRGYKNVFDALIRIVREEGVPTLWRGCIPTMARAVVVNAAQLAS 742
R +A G+ Y + + ++++EG ++G +P+ R N +
Sbjct: 239 KTRYMNSALGQ--------YSSAGHCALTMLQKEGPRAFYKGFMPSFLRLGSWNVVMFVT 290
Query: 743 YSQSKQFLL 769
Y Q K+ L+
Sbjct: 291 YEQLKRALM 299
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 58,455,443
Number of extensions: 1727464
Number of successful extensions: 7259
Number of sequences better than 1.0e-05: 67
Number of HSP's gapped: 6971
Number of HSP's successfully gapped: 123
Length of query: 476
Length of database: 18,297,164
Length adjustment: 106
Effective length of query: 370
Effective length of database: 14,802,980
Effective search space: 5477102600
Effective search space used: 5477102600
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002235
(1428 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_077173.1| mitochondrial 2-oxoglutarate/malate carrier pro... 600 e-172
Alignment gi|NP_038798.2| mitochondrial dicarboxylate carrier [Mus muscul... 196 3e-50
Alignment gi|NP_035528.1| brain mitochondrial carrier protein 1 isoform 2... 191 2e-48
Alignment gi|NP_001159922.1| brain mitochondrial carrier protein 1 isofor... 191 2e-48
Alignment gi|NP_033490.1| mitochondrial uncoupling protein 3 [Mus musculu... 176 5e-44
Alignment gi|NP_080508.1| kidney mitochondrial carrier protein 1 [Mus mus... 173 3e-43
Alignment gi|NP_035801.3| mitochondrial uncoupling protein 2 [Mus musculu... 161 1e-39
Alignment gi|NP_001013802.1| solute carrier family 25 member 34 [Mus musc... 160 3e-39
Alignment gi|NP_033489.1| mitochondrial brown fat uncoupling protein 1 [M... 159 7e-39
Alignment gi|NP_082324.1| solute carrier family 25 member 35 [Mus musculu... 154 2e-37
>ref|NP_077173.1| mitochondrial 2-oxoglutarate/malate carrier protein [Mus musculus].
Length = 314
Score = 600 bits (1548), Expect = e-172
Identities = 300/313 (95%), Positives = 306/313 (97%)
Frame = +2
Query: 140 MAATASPGAGGMDAKPRTSPKSVKFLFGGLAGMGATVFVQPLDLVKNRMQLSGEGAKTRE 319
MAATASPGAG MD KPRTSPKSVKFLFGGLAGMGATVFVQPLDLVKNRMQLSGEGAKTRE
Sbjct: 1 MAATASPGAGRMDGKPRTSPKSVKFLFGGLAGMGATVFVQPLDLVKNRMQLSGEGAKTRE 60
Query: 320 YKTSFHALTSILRAEGLRGIYTGLSAGLLRQATYTTTRLGIYTVLFERLTGADGTPPGFL 499
YKTSFHALTSIL+ EGL+GIYTGLSAGLLRQATYTTTRLGIYTVLFERLTGADGTPPGFL
Sbjct: 61 YKTSFHALTSILKTEGLKGIYTGLSAGLLRQATYTTTRLGIYTVLFERLTGADGTPPGFL 120
Query: 500 LKALIGMTAGATGAFVGTPAEVALIRMTADGRLPPDQRRGYKNVFDALIRIVREEGVPTL 679
LKALIGMTAGATGAFVGTPAEVALIRMTADGRLP DQRRGYKNVF+AL+RI REEGVPTL
Sbjct: 121 LKALIGMTAGATGAFVGTPAEVALIRMTADGRLPADQRRGYKNVFNALVRIAREEGVPTL 180
Query: 680 WRGCIPTMARAVVVNAAQLASYSQSKQFLLDSGYFSDNILCHFCASMISGLVTTAASMPV 859
WRGCIPTMARAVVVNAAQLASYSQSKQFLLDSGYFSDNILCHFCASMISGLVTTAASMPV
Sbjct: 181 WRGCIPTMARAVVVNAAQLASYSQSKQFLLDSGYFSDNILCHFCASMISGLVTTAASMPV 240
Query: 860 DIAKTRIQNMRTIDGKPEYKNGLDVLVKVIRYEGFFSLWKGFTPYYARLGPHTVLTFIFL 1039
DI KTRIQNMR IDGKPEYKNGLDVL+KV+RYEGFFSLWKGFTPYYARLGPHTVLTFIFL
Sbjct: 241 DIVKTRIQNMRMIDGKPEYKNGLDVLLKVVRYEGFFSLWKGFTPYYARLGPHTVLTFIFL 300
Query: 1040 EQMNKAYKRLFLS 1078
EQMNKAYKRLFLS
Sbjct: 301 EQMNKAYKRLFLS 313
>ref|NP_038798.2| mitochondrial dicarboxylate carrier [Mus musculus].
Length = 287
Score = 196 bits (499), Expect = 3e-50
Identities = 113/287 (39%), Positives = 158/287 (55%)
Frame = +2
Query: 200 KSVKFLFGGLAGMGATVFVQPLDLVKNRMQLSGEGAKTREYKTSFHALTSILRAEGLRGI 379
++ ++ FGGLA GA PLDL+K +Q E K R + ++R +G +
Sbjct: 5 RASRWYFGGLASCGAACCTHPLDLLKVHLQTQQE-VKLRMTGMALQ----VVRTDGFLAL 59
Query: 380 YTGLSAGLLRQATYTTTRLGIYTVLFERLTGADGTPPGFLLKALIGMTAGATGAFVGTPA 559
Y GLSA L RQ TY+ TR IY + + +T P F K L+G +G TG FVGTPA
Sbjct: 60 YNGLSASLCRQMTYSLTRFAIYETMRDYMTKDSQGPLPFYNKVLLGGISGLTGGFVGTPA 119
Query: 560 EVALIRMTADGRLPPDQRRGYKNVFDALIRIVREEGVPTLWRGCIPTMARAVVVNAAQLA 739
++ +RM D +LPP QRR Y + D L R+ REE + L+ G +R +V QL+
Sbjct: 120 DLVNVRMQNDMKLPPSQRRNYSHALDGLYRVAREESLRKLFSGATMASSRGALVTVGQLS 179
Query: 740 SYSQSKQFLLDSGYFSDNILCHFCASMISGLVTTAASMPVDIAKTRIQNMRTIDGKPEYK 919
Y Q+KQ +L +GY SDNI HF +S I+G T P+D+ KTR+ N K EY+
Sbjct: 180 CYDQAKQLVLSTGYLSDNIFTHFVSSFIAGGCATFLCQPLDVLKTRLMN-----SKGEYQ 234
Query: 920 NGLDVLVKVIRYEGFFSLWKGFTPYYARLGPHTVLTFIFLEQMNKAY 1060
++ + G + +KG P RL PHTVLTF+FLEQ+ K +
Sbjct: 235 GVFHCAMETAKL-GPQAFFKGLFPAGIRLIPHTVLTFMFLEQLRKHF 280
>ref|NP_035528.1| brain mitochondrial carrier protein 1 isoform 2 [Mus musculus].
Length = 322
Score = 191 bits (484), Expect = 2e-48
Identities = 114/309 (36%), Positives = 170/309 (55%), Gaps = 5/309 (1%)
Frame = +2
Query: 143 AATASPGAGGMDAKPRTSPKSVKFLFGGLAGMGATVFVQPLDLVKNRMQLSGEGAKTR-- 316
++T S G++ KP F++GGLA + A P+DL K R+Q+ G+ R
Sbjct: 26 SSTLSHEMSGLNWKP--------FVYGGLASIVAEFGTFPVDLTKTRLQVQGQSIDVRFK 77
Query: 317 --EYKTSFHALTSILRAEGLRGIYTGLSAGLLRQATYTTTRLGIYTVLFERLTGADGTPP 490
+Y+ FHAL I + EG+ +Y+G++ LLRQA+Y T ++GIY L +RL
Sbjct: 78 EIKYRGMFHALFRIYKEEGILALYSGIAPALLRQASYGTIKIGIYQSL-KRLFVERLEDE 136
Query: 491 GFLLKALIGMTAGATGAFVGTPAEVALIRMTADGRLPPDQRRGYKNVFDALIRIVREEGV 670
L+ + G+ +G + + P +V IRM A G L G + I I ++EG
Sbjct: 137 TLLINMICGVVSGVISSTIANPTDVLKIRMQAQGSLFQGSMIG------SFIDIYQQEGT 190
Query: 671 PTLWRGCIPTMARAVVVNAAQLASYSQSKQFLLDSGYFSDNILCHFCASMISGLVTTAAS 850
LWRG +PT RA +V +L Y +K+ L+ SG D IL HF +S GL AS
Sbjct: 191 RGLWRGVVPTAQRAAIVVGVELPVYDITKKHLIVSGMLGDTILTHFVSSFTCGLAGALAS 250
Query: 851 MPVDIAKTRIQNMRTIDGKPE-YKNGLDVLVKVIRYEGFFSLWKGFTPYYARLGPHTVLT 1027
PVD+ +TR+ N R I G + YK LD ++K+ ++EGFF+L+KGF P + RLGP ++
Sbjct: 251 NPVDVVRTRMMNQRAIVGHVDLYKGTLDGILKMWKHEGFFALYKGFWPNWLRLGPWNIIF 310
Query: 1028 FIFLEQMNK 1054
FI EQ+ +
Sbjct: 311 FITYEQLKR 319
>ref|NP_001159922.1| brain mitochondrial carrier protein 1 isoform 1 [Mus musculus].
Length = 325
Score = 191 bits (484), Expect = 2e-48
Identities = 114/309 (36%), Positives = 170/309 (55%), Gaps = 5/309 (1%)
Frame = +2
Query: 143 AATASPGAGGMDAKPRTSPKSVKFLFGGLAGMGATVFVQPLDLVKNRMQLSGEGAKTR-- 316
++T S G++ KP F++GGLA + A P+DL K R+Q+ G+ R
Sbjct: 29 SSTLSHEMSGLNWKP--------FVYGGLASIVAEFGTFPVDLTKTRLQVQGQSIDVRFK 80
Query: 317 --EYKTSFHALTSILRAEGLRGIYTGLSAGLLRQATYTTTRLGIYTVLFERLTGADGTPP 490
+Y+ FHAL I + EG+ +Y+G++ LLRQA+Y T ++GIY L +RL
Sbjct: 81 EIKYRGMFHALFRIYKEEGILALYSGIAPALLRQASYGTIKIGIYQSL-KRLFVERLEDE 139
Query: 491 GFLLKALIGMTAGATGAFVGTPAEVALIRMTADGRLPPDQRRGYKNVFDALIRIVREEGV 670
L+ + G+ +G + + P +V IRM A G L G + I I ++EG
Sbjct: 140 TLLINMICGVVSGVISSTIANPTDVLKIRMQAQGSLFQGSMIG------SFIDIYQQEGT 193
Query: 671 PTLWRGCIPTMARAVVVNAAQLASYSQSKQFLLDSGYFSDNILCHFCASMISGLVTTAAS 850
LWRG +PT RA +V +L Y +K+ L+ SG D IL HF +S GL AS
Sbjct: 194 RGLWRGVVPTAQRAAIVVGVELPVYDITKKHLIVSGMLGDTILTHFVSSFTCGLAGALAS 253
Query: 851 MPVDIAKTRIQNMRTIDGKPE-YKNGLDVLVKVIRYEGFFSLWKGFTPYYARLGPHTVLT 1027
PVD+ +TR+ N R I G + YK LD ++K+ ++EGFF+L+KGF P + RLGP ++
Sbjct: 254 NPVDVVRTRMMNQRAIVGHVDLYKGTLDGILKMWKHEGFFALYKGFWPNWLRLGPWNIIF 313
Query: 1028 FIFLEQMNK 1054
FI EQ+ +
Sbjct: 314 FITYEQLKR 322
>ref|NP_033490.1| mitochondrial uncoupling protein 3 [Mus musculus].
Length = 308
Score = 176 bits (445), Expect = 5e-44
Identities = 100/290 (34%), Positives = 153/290 (52%), Gaps = 2/290 (0%)
Frame = +2
Query: 206 VKFLFGGLAGMGATVFVQPLDLVKNRMQLSGE--GAKTREYKTSFHALTSILRAEGLRGI 379
VKFL G A A + PLD K R+Q+ GE GA++ +Y+ + +++R EG R
Sbjct: 15 VKFLGAGTAACFADLLTFPLDTAKVRLQIQGENPGAQSVQYRGVLGTILTMVRTEGPRSP 74
Query: 380 YTGLSAGLLRQATYTTTRLGIYTVLFERLTGADGTPPGFLLKALIGMTAGATGAFVGTPA 559
Y+GL AGL RQ ++ + R+G+Y + + T ++ L G T GA P
Sbjct: 75 YSGLVAGLHRQMSFASIRIGLYDSVKQFYTPKGADHSSVAIRILAGCTTGAMAVTCAQPT 134
Query: 560 EVALIRMTADGRLPPDQRRGYKNVFDALIRIVREEGVPTLWRGCIPTMARAVVVNAAQLA 739
+V +R A RL R Y+ DA I REEGV LW+G P + R +VN A++
Sbjct: 135 DVVKVRFQAMIRLGTGGERKYRGTMDAYRTIAREEGVRGLWKGTWPNITRNAIVNCAEMV 194
Query: 740 SYSQSKQFLLDSGYFSDNILCHFCASMISGLVTTAASMPVDIAKTRIQNMRTIDGKPEYK 919
+Y K+ LL+S F+DN CHF ++ +G T + PVD+ KTR N Y+
Sbjct: 195 TYDIIKEKLLESHLFTDNFPCHFVSAFGAGFCATVVASPVDVVKTRYMNAPL----GRYR 250
Query: 920 NGLDVLVKVIRYEGFFSLWKGFTPYYARLGPHTVLTFIFLEQMNKAYKRL 1069
+ L ++K++ EG + +KGF P + RLG V+ F+ EQ+ +A ++
Sbjct: 251 SPLHCMLKMVAQEGPTAFYKGFVPSFLRLGAWNVMMFVTYEQLKRALMKV 300
Score = 73.6 bits (179), Expect = 4e-13
Identities = 45/175 (25%), Positives = 75/175 (42%), Gaps = 2/175 (1%)
Frame = +2
Query: 485 PPGFLLKALIGMTAGATGAFVGTPAEVALIRMTADGRLPPDQRRGYKNVFDALIRIVREE 664
PP ++K L TA + P + A +R+ G P Q Y+ V ++ +VR E
Sbjct: 10 PPTTVVKFLGAGTAACFADLLTFPLDTAKVRLQIQGENPGAQSVQYRGVLGTILTMVRTE 69
Query: 665 GVPTLWRGCIPTMARAVVVNAAQLASYSQSKQFLLDSGYFSDNILCHFCASMISGLVTTA 844
G + + G + + R + + ++ Y KQF G ++ A +G +
Sbjct: 70 GPRSPYSGLVAGLHRQMSFASIRIGLYDSVKQFYTPKGADHSSVAIRILAGCTTGAMAVT 129
Query: 845 ASMPVDIAKTRIQNMRTI--DGKPEYKNGLDVLVKVIRYEGFFSLWKGFTPYYAR 1003
+ P D+ K R Q M + G+ +Y+ +D + R EG LWKG P R
Sbjct: 130 CAQPTDVVKVRFQAMIRLGTGGERKYRGTMDAYRTIAREEGVRGLWKGTWPNITR 184
>ref|NP_080508.1| kidney mitochondrial carrier protein 1 [Mus musculus].
Length = 291
Score = 173 bits (439), Expect = 3e-43
Identities = 104/287 (36%), Positives = 157/287 (54%), Gaps = 6/287 (2%)
Frame = +2
Query: 212 FLFGGLAGMGATVFVQPLDLVKNRMQLSGE--GAKTRE--YKTSFHALTSILRAEGLRGI 379
F++GGLA + A P+DL K R+Q+ G+ A RE Y+ HAL I R EGL+ +
Sbjct: 9 FVYGGLASITAECGTFPIDLTKTRLQIQGQTNDANFREIRYRGMLHALMRIGREEGLKAL 68
Query: 380 YTGLSAGLLRQATYTTTRLGIYTVLFERLTGADGTPPGFLLKALIGMTAGATGAFVGTPA 559
Y+G++ +LRQA+Y T ++G Y L +RL L+ + G+ +G + + P
Sbjct: 69 YSGIAPAMLRQASYGTIKIGTYQSL-KRLAVERPEDETLLVNVVCGILSGVISSAIANPT 127
Query: 560 EVALIRMTADGRLPPDQRRGYKNVFDALIRIVREEGVPTLWRGCIPTMARAVVVNAAQLA 739
+V IRM A + D+ + I ++EG LW+G T RA +V +L
Sbjct: 128 DVLKIRMQAQNSAVQG------GMIDSFMSIYQQEGTRGLWKGVSLTAQRAAIVVGVELP 181
Query: 740 SYSQSKQFLLDSGYFSDNILCHFCASMISGLVTTAASMPVDIAKTRIQNMRTI-DGK-PE 913
Y +K+ L+ SG D + HF +S GLV AS PVD+ +TR+ N R + DG+
Sbjct: 182 VYDITKKHLILSGLMGDTVATHFLSSFTCGLVGALASNPVDVVRTRMMNQRALRDGRCAG 241
Query: 914 YKNGLDVLVKVIRYEGFFSLWKGFTPYYARLGPHTVLTFIFLEQMNK 1054
YK LD L++ + EGFF+L+KGF P + RLGP ++ F+ EQ+ K
Sbjct: 242 YKGTLDCLLQTWKNEGFFALYKGFWPNWLRLGPWNIIFFLTYEQLKK 288
Score = 65.5 bits (158), Expect = 1e-10
Identities = 58/241 (24%), Positives = 91/241 (37%), Gaps = 7/241 (2%)
Frame = +2
Query: 59 LLRAQCHLGRERGRARTGPGAEGH*VAMAATASPGAGGMDA-------KPRTSPKSVKFL 217
+L A +GRE G G + A+ + G + +P V +
Sbjct: 52 MLHALMRIGREEGLKALYSGIAPAMLRQASYGTIKIGTYQSLKRLAVERPEDETLLVNVV 111
Query: 218 FGGLAGMGATVFVQPLDLVKNRMQLSGEGAKTREYKTSFHALTSILRAEGLRGIYTGLSA 397
G L+G+ ++ P D++K RMQ + + SI + EG RG++ G+S
Sbjct: 112 CGILSGVISSAIANPTDVLKIRMQAQNSAVQ----GGMIDSFMSIYQQEGTRGLWKGVSL 167
Query: 398 GLLRQATYTTTRLGIYTVLFERLTGADGTPPGFLLKALIGMTAGATGAFVGTPAEVALIR 577
R A L +Y + + L + L T G GA P +V R
Sbjct: 168 TAQRAAIVVGVELPVYDITKKHLILSGLMGDTVATHFLSSFTCGLVGALASNPVDVVRTR 227
Query: 578 MTADGRLPPDQRRGYKNVFDALIRIVREEGVPTLWRGCIPTMARAVVVNAAQLASYSQSK 757
M L + GYK D L++ + EG L++G P R N +Y Q K
Sbjct: 228 MMNQRALRDGRCAGYKGTLDCLLQTWKNEGFFALYKGFWPNWLRLGPWNIIFFLTYEQLK 287
Query: 758 Q 760
+
Sbjct: 288 K 288
>ref|NP_035801.3| mitochondrial uncoupling protein 2 [Mus musculus].
Length = 309
Score = 161 bits (408), Expect = 1e-39
Identities = 98/298 (32%), Positives = 152/298 (51%), Gaps = 6/298 (2%)
Frame = +2
Query: 203 SVKFLFGGLAGMGATVFVQPLDLVKNRMQLSGEG------AKTREYKTSFHALTSILRAE 364
+VKFL G A A + PLD K R+Q+ GE A + +Y+ + +++R E
Sbjct: 14 TVKFLGAGTAACIADLITFPLDTAKVRLQIQGESQGLVRTAASAQYRGVLGTILTMVRTE 73
Query: 365 GLRGIYTGLSAGLLRQATYTTTRLGIYTVLFERLTGADGTPPGFLLKALIGMTAGATGAF 544
G R +Y GL AGL RQ ++ + R+G+Y + + T G + L G T GA
Sbjct: 74 GPRSLYNGLVAGLQRQMSFASVRIGLYDSVKQFYTKGS-EHAGIGSRLLAGSTTGALAVA 132
Query: 545 VGTPAEVALIRMTADGRLPPDQRRGYKNVFDALIRIVREEGVPTLWRGCIPTMARAVVVN 724
V P +V +R A R +R Y++ +A I REEG+ LW+G P +AR +VN
Sbjct: 133 VAQPTDVVKVRFQAQARAGGGRR--YQSTVEAYKTIAREEGIRGLWKGTSPNVARNAIVN 190
Query: 725 AAQLASYSQSKQFLLDSGYFSDNILCHFCASMISGLVTTAASMPVDIAKTRIQNMRTIDG 904
A+L +Y K LL + +D++ CHF ++ +G TT + PVD+ KTR N
Sbjct: 191 CAELVTYDLIKDTLLKANLMTDDLPCHFTSAFGAGFCTTVIASPVDVVKTRYMN----SA 246
Query: 905 KPEYKNGLDVLVKVIRYEGFFSLWKGFTPYYARLGPHTVLTFIFLEQMNKAYKRLFLS 1078
+Y + + ++R EG + +KGF P + RLG V+ F+ EQ+ +A + S
Sbjct: 247 LGQYHSAGHCALTMLRKEGPRAFYKGFMPSFLRLGSWNVVMFVTYEQLKRALMAAYQS 304
>ref|NP_001013802.1| solute carrier family 25 member 34 [Mus musculus].
Length = 318
Score = 160 bits (404), Expect = 3e-39
Identities = 110/319 (34%), Positives = 168/319 (52%), Gaps = 10/319 (3%)
Frame = +2
Query: 140 MAATASPGAGGMDAKPRTSPKSVKFLFGGLAGMGATVFVQPLDLVKNRMQLSGE----GA 307
M T + A MD++ SP +V + G A A VF PL++VK R+QL GE G
Sbjct: 1 MKPTQAQMAPAMDSREMVSP-AVDLVLGASACCLACVFTNPLEVVKTRLQLQGELQAPGT 59
Query: 308 KTREYKTSFHALTSILRAEGLRGIYTGLSAGLLRQATYTTTRLGIYTVLFERLTGADGTP 487
R Y+ ++ ++ RA+GL G+ GL+AGLL Q R Y++ + G P
Sbjct: 60 YPRPYRGFVSSVAAVARADGLWGLQKGLAAGLLYQGLMNGVRFYCYSLACQ--AGLTQQP 117
Query: 488 PGFLLKALIGMTAGATGAFVGTPAEVALIRMTAD--GRLPPDQRRGYKNVFDALIRIVRE 661
G ++ G AGA GAFVG+PA + ++ A + + ++ V AL I R+
Sbjct: 118 GGTVVA---GAAAGALGAFVGSPAYLVKTQLQAQTVATMAVGHQHQHQGVLSALETIWRQ 174
Query: 662 EGVPTLWRGCIPTMARAVVVNAAQLASYSQSKQFLLDSGYF-SDNILCHFCASMISGLVT 838
+G+ LWRG + R V +AAQLA+++ +K ++ D +F D+ L MIS +
Sbjct: 175 QGMLGLWRGVGGAVPRVTVGSAAQLATFTSAKAWVQDRQWFLEDSWLVTLAGGMISSIAV 234
Query: 839 TAASMPVDIAKTRIQNMRTID--GKPEYKNGL-DVLVKVIRYEGFFSLWKGFTPYYARLG 1009
A P+D+ TR+ N + +D G+ + GL D LVK + EG +L+KG P Y RLG
Sbjct: 235 VAVMTPLDVVSTRLYN-QPVDRAGRGQLYGGLADCLVKTCQQEGPLALYKGLGPAYLRLG 293
Query: 1010 PHTVLTFIFLEQMNKAYKR 1066
PHT+L+ F +++ K R
Sbjct: 294 PHTILSMFFWDELRKLVAR 312
>ref|NP_033489.1| mitochondrial brown fat uncoupling protein 1 [Mus musculus].
Length = 307
Score = 159 bits (401), Expect = 7e-39
Identities = 90/285 (31%), Positives = 148/285 (51%), Gaps = 2/285 (0%)
Frame = +2
Query: 206 VKFLFGGLAGMGATVFVQPLDLVKNRMQLSGEG--AKTREYKTSFHALTSILRAEGLRGI 379
VK G++ A + PLD K R+Q+ GEG + T YK +T++ + EGL +
Sbjct: 15 VKIFSAGVSACLADIITFPLDTAKVRLQIQGEGQASSTIRYKGVLGTITTLAKTEGLPKL 74
Query: 380 YTGLSAGLLRQATYTTTRLGIYTVLFERLTGADGTPPGFLLKALIGMTAGATGAFVGTPA 559
Y+GL AG+ RQ ++ + R+G+Y + E + TP K G+ G F+G P
Sbjct: 75 YSGLPAGIQRQISFASLRIGLYDSVQEYFSSGRETPASLGNKISAGLMTGGVAVFIGQPT 134
Query: 560 EVALIRMTADGRLPPDQRRGYKNVFDALIRIVREEGVPTLWRGCIPTMARAVVVNAAQLA 739
EV +RM A L + R Y ++A I E + TLW+G P + R V++N +L
Sbjct: 135 EVVKVRMQAQSHLHGIKPR-YTGTYNAYRVIATTESLSTLWKGTTPNLMRNVIINCTELV 193
Query: 740 SYSQSKQFLLDSGYFSDNILCHFCASMISGLVTTAASMPVDIAKTRIQNMRTIDGKPEYK 919
+Y K L+++ +D++ CH +++++G TT + PVD+ KTR N ++ G +Y
Sbjct: 194 TYDLMKGALVNNKILADDVPCHLLSALVAGFCTTLLASPVDVVKTRFIN--SLPG--QYP 249
Query: 920 NGLDVLVKVIRYEGFFSLWKGFTPYYARLGPHTVLTFIFLEQMNK 1054
+ + + EG + +KGF + RLG V+ F+ EQ+ K
Sbjct: 250 SVPSCAMSMYTKEGPTAFFKGFVASFLRLGSWNVIMFVCFEQLKK 294
>ref|NP_082324.1| solute carrier family 25 member 35 [Mus musculus].
Length = 300
Score = 154 bits (389), Expect = 2e-37
Identities = 104/294 (35%), Positives = 147/294 (50%), Gaps = 11/294 (3%)
Frame = +2
Query: 212 FLFGGLAGMGATVFVQPLDLVKNRMQLSGE----GAKTREYKTSFHALTSILRAEGLRGI 379
FL G+A GA VF PL++VK RMQL GE G R Y+ FHA +I + +GL +
Sbjct: 3 FLMSGVAACGACVFTNPLEVVKTRMQLQGELQAPGTYQRHYRNVFHAFFTIGKVDGLAAL 62
Query: 380 YTGLSAGLLRQATYTTTRLGIYTVLFER--LTGADGTPPGFLLKALIGMTAGATGAFVGT 553
GL LL Q RLG Y + R L +GT + A G AG GA++G+
Sbjct: 63 QKGLGPALLYQFLMNGIRLGTYGLAESRGYLHTNEGTHSP-VRSAAAGALAGVMGAYLGS 121
Query: 554 PAEVALIRMTADGRLPPDQRRGYKN--VFDALIRIVREEGVPTLWRGCIPTMARAVVVNA 727
P + + A YK+ +F AL I ++ G+ LWRG + + R V+ ++
Sbjct: 122 PIYMVKTHLQAQAASEIAVGHQYKHQGMFQALTEIGQKHGLVGLWRGAVGGLPRVVIGSS 181
Query: 728 AQLASYSQSKQFLLDSGYFS-DNILCHFCASMISGLVTTAASMPVDIAKTRIQNMRT-ID 901
QL ++S K L F + A+M+SG+ A P D+A TR+ N T
Sbjct: 182 TQLCTFSSIKDLLSQWEIFPPQSWKVALAAAMVSGVAIVVAMTPFDVASTRLYNQPTDTR 241
Query: 902 GKP-EYKNGLDVLVKVIRYEGFFSLWKGFTPYYARLGPHTVLTFIFLEQMNKAY 1060
GK Y+ LD L++ R EGFF ++KG Y RLGPHT+L+ F +Q+ Y
Sbjct: 242 GKGLMYRGILDALLQTARTEGFFGMYKGIGASYFRLGPHTILSLFFWDQLRSFY 295
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 49,056,422
Number of extensions: 1417165
Number of successful extensions: 5683
Number of sequences better than 1.0e-05: 53
Number of HSP's gapped: 5445
Number of HSP's successfully gapped: 86
Length of query: 476
Length of database: 15,617,559
Length adjustment: 105
Effective length of query: 371
Effective length of database: 12,463,779
Effective search space: 4624062009
Effective search space used: 4624062009
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002235
(1428 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_003131953.2| PREDICTED: LOW QUALITY PROTEIN: mitochondria... 619 e-177
Alignment gi|XP_003360489.1| PREDICTED: brain mitochondrial carrier prote... 189 3e-48
Alignment gi|XP_003135426.2| PREDICTED: brain mitochondrial carrier prote... 189 3e-48
Alignment gi|NP_999214.1| mitochondrial uncoupling protein 3 [Sus scrofa]. 177 1e-44
Alignment gi|XP_003361343.1| PREDICTED: brain mitochondrial carrier prote... 163 3e-40
Alignment gi|NP_999454.1| mitochondrial uncoupling protein 2 [Sus scrofa]. 162 6e-40
Alignment gi|XP_003127686.1| PREDICTED: solute carrier family 25 member 3... 158 6e-39
Alignment gi|NP_001230286.1| solute carrier family 25, member 35 [Sus scr... 154 2e-37
Alignment gi|NP_001182044.1| mitochondrial uncoupling protein 4 [Sus scro... 143 3e-34
Alignment gi|XP_003133528.2| PREDICTED: calcium-binding mitochondrial car... 106 3e-23
>ref|XP_003131953.2| PREDICTED: LOW QUALITY PROTEIN: mitochondrial 2-oxoglutarate/malate
carrier protein [Sus scrofa].
Length = 314
Score = 619 bits (1596), Expect = e-177
Identities = 312/313 (99%), Positives = 312/313 (99%)
Frame = +2
Query: 140 MAATASPGAGGMDAKPRTSPKSVKFLFGGLAGMGATVFVQPLDLVKNRMQLSGEGAKTRE 319
MAATASPGAGGMDAKPRTSPKSVKFLFGGLAGMGATVFVQPLDLVKNRMQLSGEGAKTRE
Sbjct: 1 MAATASPGAGGMDAKPRTSPKSVKFLFGGLAGMGATVFVQPLDLVKNRMQLSGEGAKTRE 60
Query: 320 YKTSFHALTSILRAEGLRGIYTGLSAGLLRQATYTTTRLGIYTVLFERLTGADGTPPGFL 499
YKTSFHALTSILRAEGLRGIYTGLSAGLLRQATYTTTRLGIYTVLFERLTGADGTPPGFL
Sbjct: 61 YKTSFHALTSILRAEGLRGIYTGLSAGLLRQATYTTTRLGIYTVLFERLTGADGTPPGFL 120
Query: 500 LKALIGMTAGATGAFVGTPAEVALIRMTADGRLPPDQRRGYKNVFDALIRIVREEGVPTL 679
LKALIGMTAGATGAFVGTPAEVALIRMTADGRLPPDQRRGYKNVFDALIRIVREEGVPTL
Sbjct: 121 LKALIGMTAGATGAFVGTPAEVALIRMTADGRLPPDQRRGYKNVFDALIRIVREEGVPTL 180
Query: 680 WRGCIPTMARAVVVNAAQLASYSQSKQFLLDSGYFSDNILCHFCASMISGLVTTAASMPV 859
WRGCIPTMARAVVVNAAQLASYSQSKQFLLDSGYFSDNILCHFCASMISGLVTTAASMPV
Sbjct: 181 WRGCIPTMARAVVVNAAQLASYSQSKQFLLDSGYFSDNILCHFCASMISGLVTTAASMPV 240
Query: 860 DIAKTRIQNMRTIDGKPEYKNGLDVLVKVIRYEGFFSLWKGFTPYYARLGPHTVLTFIFL 1039
DIAKTRIQNMRTIDGKPEYKNGLDVLVKVIRYEGFFSLWKGFTPYYARLGPHTVLTFIFL
Sbjct: 241 DIAKTRIQNMRTIDGKPEYKNGLDVLVKVIRYEGFFSLWKGFTPYYARLGPHTVLTFIFL 300
Query: 1040 EQMNKAYKRLFLS 1078
EQMNKAY RLFLS
Sbjct: 301 EQMNKAYXRLFLS 313
>ref|XP_003360489.1| PREDICTED: brain mitochondrial carrier protein 1-like isoform 2 [Sus
scrofa].
Length = 325
Score = 189 bits (480), Expect = 3e-48
Identities = 114/309 (36%), Positives = 169/309 (54%), Gaps = 5/309 (1%)
Frame = +2
Query: 143 AATASPGAGGMDAKPRTSPKSVKFLFGGLAGMGATVFVQPLDLVKNRMQLSGEGAKTR-- 316
+A S G++ KP F++GGLA + A P+DL K R+Q+ G+ R
Sbjct: 29 SAIVSHEMSGLNWKP--------FVYGGLASIVAEFGTFPVDLTKTRLQVQGQSIDVRFK 80
Query: 317 --EYKTSFHALTSILRAEGLRGIYTGLSAGLLRQATYTTTRLGIYTVLFERLTGADGTPP 490
+Y+ FHAL I + EG+ +Y+G++ LLRQA+Y T ++GIY L +RL
Sbjct: 81 EIKYRGMFHALFRIYKEEGVLALYSGIAPALLRQASYGTIKIGIYQSL-KRLFVERLEDE 139
Query: 491 GFLLKALIGMTAGATGAFVGTPAEVALIRMTADGRLPPDQRRGYKNVFDALIRIVREEGV 670
L+ + G+ +G + + P +V IRM A G L G + I I ++EG
Sbjct: 140 TLLINMICGVVSGVISSTIANPTDVLKIRMQAQGSLFQGSMIG------SFIDIYQQEGT 193
Query: 671 PTLWRGCIPTMARAVVVNAAQLASYSQSKQFLLDSGYFSDNILCHFCASMISGLVTTAAS 850
LWRG +PT RA +V +L Y +K+ L+ SG D IL HF +S GL AS
Sbjct: 194 RGLWRGVVPTAQRAAIVVGVELPVYDITKKHLILSGVLGDTILTHFVSSFTCGLAGALAS 253
Query: 851 MPVDIAKTRIQNMRTIDGKPE-YKNGLDVLVKVIRYEGFFSLWKGFTPYYARLGPHTVLT 1027
PVD+ +TR+ N R I G + YK LD ++K+ ++EGFF+L+KGF P + RLGP ++
Sbjct: 254 NPVDVVRTRMMNQRAIVGHVDLYKGTLDGILKMWKHEGFFALYKGFWPNWLRLGPWNIIF 313
Query: 1028 FIFLEQMNK 1054
FI EQ+ +
Sbjct: 314 FITYEQLKR 322
>ref|XP_003135426.2| PREDICTED: brain mitochondrial carrier protein 1-like isoform 1 [Sus
scrofa].
Length = 325
Score = 189 bits (480), Expect = 3e-48
Identities = 114/309 (36%), Positives = 169/309 (54%), Gaps = 5/309 (1%)
Frame = +2
Query: 143 AATASPGAGGMDAKPRTSPKSVKFLFGGLAGMGATVFVQPLDLVKNRMQLSGEGAKTR-- 316
+A S G++ KP F++GGLA + A P+DL K R+Q+ G+ R
Sbjct: 29 SAIVSHEMSGLNWKP--------FVYGGLASIVAEFGTFPVDLTKTRLQVQGQSIDVRFK 80
Query: 317 --EYKTSFHALTSILRAEGLRGIYTGLSAGLLRQATYTTTRLGIYTVLFERLTGADGTPP 490
+Y+ FHAL I + EG+ +Y+G++ LLRQA+Y T ++GIY L +RL
Sbjct: 81 EIKYRGMFHALFRIYKEEGVLALYSGIAPALLRQASYGTIKIGIYQSL-KRLFVERLEDE 139
Query: 491 GFLLKALIGMTAGATGAFVGTPAEVALIRMTADGRLPPDQRRGYKNVFDALIRIVREEGV 670
L+ + G+ +G + + P +V IRM A G L G + I I ++EG
Sbjct: 140 TLLINMICGVVSGVISSTIANPTDVLKIRMQAQGSLFQGSMIG------SFIDIYQQEGT 193
Query: 671 PTLWRGCIPTMARAVVVNAAQLASYSQSKQFLLDSGYFSDNILCHFCASMISGLVTTAAS 850
LWRG +PT RA +V +L Y +K+ L+ SG D IL HF +S GL AS
Sbjct: 194 RGLWRGVVPTAQRAAIVVGVELPVYDITKKHLILSGVLGDTILTHFVSSFTCGLAGALAS 253
Query: 851 MPVDIAKTRIQNMRTIDGKPE-YKNGLDVLVKVIRYEGFFSLWKGFTPYYARLGPHTVLT 1027
PVD+ +TR+ N R I G + YK LD ++K+ ++EGFF+L+KGF P + RLGP ++
Sbjct: 254 NPVDVVRTRMMNQRAIVGHVDLYKGTLDGILKMWKHEGFFALYKGFWPNWLRLGPWNIIF 313
Query: 1028 FIFLEQMNK 1054
FI EQ+ +
Sbjct: 314 FITYEQLKR 322
>ref|NP_999214.1| mitochondrial uncoupling protein 3 [Sus scrofa].
Length = 308
Score = 177 bits (449), Expect = 1e-44
Identities = 98/291 (33%), Positives = 151/291 (51%), Gaps = 2/291 (0%)
Frame = +2
Query: 203 SVKFLFGGLAGMGATVFVQPLDLVKNRMQLSGEG--AKTREYKTSFHALTSILRAEGLRG 376
+VK L G A A + PLD K R+Q+ GE A++ +Y+ + +++R EG R
Sbjct: 14 AVKLLGAGTAACFADLLTFPLDTAKVRLQIQGENQAARSAQYRGVLGTILTMVRNEGPRS 73
Query: 377 IYTGLSAGLLRQATYTTTRLGIYTVLFERLTGADGTPPGFLLKALIGMTAGATGAFVGTP 556
Y GL AGL RQ ++ + R+G+Y + + T + L G T GA P
Sbjct: 74 PYNGLVAGLQRQMSFASIRIGLYDSVKQLYTPKGSDHSSITTRILAGCTTGAMAVTCAQP 133
Query: 557 AEVALIRMTADGRLPPDQRRGYKNVFDALIRIVREEGVPTLWRGCIPTMARAVVVNAAQL 736
+V +R A P R Y DA I REEGV LW+G +P + R +VN A++
Sbjct: 134 TDVVKVRFQASIHAGPRSNRKYSGTMDAYRTIAREEGVRGLWKGILPNITRNAIVNCAEM 193
Query: 737 ASYSQSKQFLLDSGYFSDNILCHFCASMISGLVTTAASMPVDIAKTRIQNMRTIDGKPEY 916
+Y K+ +LD +DN+ CHF ++ +G T + PVD+ KTR N +Y
Sbjct: 194 VTYDVIKEKVLDYHLLTDNLPCHFVSAFGAGFCATVVASPVDVVKTRYMN----SPPGQY 249
Query: 917 KNGLDVLVKVIRYEGFFSLWKGFTPYYARLGPHTVLTFIFLEQMNKAYKRL 1069
+N LD ++K++ EG + +KGFTP + RLG V+ F+ EQ+ +A ++
Sbjct: 250 QNPLDCMLKMVTQEGPTAFYKGFTPSFLRLGSWNVVMFVSYEQLKRALMKV 300
>ref|XP_003361343.1| PREDICTED: brain mitochondrial carrier protein 1-like [Sus scrofa].
Length = 310
Score = 163 bits (412), Expect = 3e-40
Identities = 108/309 (34%), Positives = 161/309 (52%), Gaps = 5/309 (1%)
Frame = +2
Query: 143 AATASPGAGGMDAKPRTSPKSVKFLFGGLAGMGATVFVQPLDLVKNRMQLSGEGAKTR-- 316
+A S G++ KP F++GGLA + A P+DL K R+Q+ G+ R
Sbjct: 29 SAIVSHEMSGLNWKP--------FVYGGLASIVAEFGTFPVDLTKTRLQVQGQSIDVRFK 80
Query: 317 --EYKTSFHALTSILRAEGLRGIYTGLSAGLLRQATYTTTRLGIYTVLFERLTGADGTPP 490
+Y+ FHAL I + EG+ +Y+G++ LLRQA+Y T ++GIY L +RL
Sbjct: 81 EIKYRGMFHALFRIYKEEGVLALYSGIAPALLRQASYGTIKIGIYQSL-KRLFVERLEDE 139
Query: 491 GFLLKALIGMTAGATGAFVGTPAEVALIRMTADGRLPPDQRRGYKNVFDALIRIVREEGV 670
L+ + G+ +G + + P +V IRM A G L G + I I ++EG
Sbjct: 140 TLLINMICGVVSGVISSTIANPTDVLKIRMQAQGSLFQGSMIG------SFIDIYQQEGT 193
Query: 671 PTLWRGCIPTMARAVVVNAAQLASYSQSKQFLLDSGYFSDNILCHFCASMISGLVTTAAS 850
LWR V+ L + K+ L+ SG D IL HF +S GL AS
Sbjct: 194 RGLWR-----------VSTLSLIT----KKHLILSGVLGDTILTHFVSSFTCGLAGALAS 238
Query: 851 MPVDIAKTRIQNMRTIDGKPE-YKNGLDVLVKVIRYEGFFSLWKGFTPYYARLGPHTVLT 1027
PVD+ +TR+ N R I G + YK LD ++K+ ++EGFF+L+KGF P + RLGP ++
Sbjct: 239 NPVDVVRTRMMNQRAIVGHVDLYKGTLDGILKMWKHEGFFALYKGFWPNWLRLGPWNIIF 298
Query: 1028 FIFLEQMNK 1054
FI EQ+ +
Sbjct: 299 FITYEQLKR 307
>ref|NP_999454.1| mitochondrial uncoupling protein 2 [Sus scrofa].
Length = 309
Score = 162 bits (409), Expect = 6e-40
Identities = 98/291 (33%), Positives = 150/291 (51%), Gaps = 6/291 (2%)
Frame = +2
Query: 203 SVKFLFGGLAGMGATVFVQPLDLVKNRMQLSGE------GAKTREYKTSFHALTSILRAE 364
+VKFL G A A + PLD K R+Q+ GE A + +Y+ + +++R E
Sbjct: 14 TVKFLGAGTAACIADLITFPLDTAKVRLQIQGERRGPVQAAASAQYRGVLGTILTMVRNE 73
Query: 365 GLRGIYTGLSAGLLRQATYTTTRLGIYTVLFERLTGADGTPPGFLLKALIGMTAGATGAF 544
G R +Y GL AGL RQ ++ + R+G+Y + T G + L G T GA
Sbjct: 74 GPRSLYNGLVAGLQRQMSFASVRIGLYDSVKHFYTKGS-EHAGIGSRLLAGSTTGALAVA 132
Query: 545 VGTPAEVALIRMTADGRLPPDQRRGYKNVFDALIRIVREEGVPTLWRGCIPTMARAVVVN 724
V P +V +R A R +R Y++ DA I REEG+ LW+G P +AR +VN
Sbjct: 133 VAQPTDVVKVRFQAQARAGGGRR--YRSTVDAYKTIAREEGLRGLWKGTSPNVARNAIVN 190
Query: 725 AAQLASYSQSKQFLLDSGYFSDNILCHFCASMISGLVTTAASMPVDIAKTRIQNMRTIDG 904
A+L +Y K LL + +D++ CHF ++ +G TT + PVD+ KTR N
Sbjct: 191 CAELVTYDLIKDTLLKADLMTDDLPCHFTSAFGAGFCTTVIASPVDVVKTRYMN----SA 246
Query: 905 KPEYKNGLDVLVKVIRYEGFFSLWKGFTPYYARLGPHTVLTFIFLEQMNKA 1057
+Y + + +++ EG + +KGFTP + RLG V+ F+ EQ+ +A
Sbjct: 247 PGQYSSAGHCALTMLQKEGPRAFYKGFTPSFLRLGSWNVVMFVTYEQLKRA 297
Score = 66.6 bits (161), Expect = 3e-11
Identities = 48/187 (25%), Positives = 75/187 (40%)
Frame = +2
Query: 209 KFLFGGLAGMGATVFVQPLDLVKNRMQLSGEGAKTREYKTSFHALTSILRAEGLRGIYTG 388
+ L G G A QP D+VK R Q R Y+++ A +I R EGLRG++ G
Sbjct: 119 RLLAGSTTGALAVAVAQPTDVVKVRFQAQARAGGGRRYRSTVDAYKTIAREEGLRGLWKG 178
Query: 389 LSAGLLRQATYTTTRLGIYTVLFERLTGADGTPPGFLLKALIGMTAGATGAFVGTPAEVA 568
S + R A L Y ++ + L AD AG + +P +V
Sbjct: 179 TSPNVARNAIVNCAELVTYDLIKDTLLKADLMTDDLPCHFTSAFGAGFCTTVIASPVDVV 238
Query: 569 LIRMTADGRLPPDQRRGYKNVFDALIRIVREEGVPTLWRGCIPTMARAVVVNAAQLASYS 748
R P Q Y + + ++++EG ++G P+ R N +Y
Sbjct: 239 KTRYMNSA---PGQ---YSSAGHCALTMLQKEGPRAFYKGFTPSFLRLGSWNVVMFVTYE 292
Query: 749 QSKQFLL 769
Q K+ L+
Sbjct: 293 QLKRALM 299
>ref|XP_003127686.1| PREDICTED: solute carrier family 25 member 34-like [Sus scrofa].
Length = 304
Score = 158 bits (400), Expect = 6e-39
Identities = 104/302 (34%), Positives = 165/302 (54%), Gaps = 10/302 (3%)
Frame = +2
Query: 191 TSPKSVKFLFGGLAGMGATVFVQPLDLVKNRMQLSGE----GAKTREYKTSFHALTSILR 358
T P +V + G A A VF PL++VK R+QL GE G R Y+ ++ ++ R
Sbjct: 3 TVPPAVDLVLGASACCLACVFTNPLEVVKTRLQLQGELQARGTYPRHYRGFVASVAAVAR 62
Query: 359 AEGLRGIYTGLSAGLLRQATYTTTRLGIYTVLFERLTGADGTPPGFLLKALIGMTAGATG 538
A+GL G+ GL+AGLL Q R Y+++ + G + P G ++ G AGA G
Sbjct: 63 ADGLFGLQKGLAAGLLYQGLMNGVRFYCYSLVCQ--AGLNQQPGGTVVA---GAVAGALG 117
Query: 539 AFVGTPAEVALIRMTAD--GRLPPDQRRGYKNVFDALIRIVREEGVPTLWRGCIPTMARA 712
AFVG+PA + ++ A + + +++V AL I R++G+ LWRG + R
Sbjct: 118 AFVGSPAYLVKTQLQAQTVAAMAVGHQHHHQSVLGALETIWRQQGLAGLWRGVGGAVPRV 177
Query: 713 VVVNAAQLASYSQSKQFLLDSGYF-SDNILCHFCASMISGLVTTAASMPVDIAKTRIQNM 889
+V +AAQLA+++ +K ++ + + D+ L MIS + A P D+ TR+ N
Sbjct: 178 MVGSAAQLATFASAKAWVQEQQWLPEDSWLVALAGGMISSVAVVAVMTPFDVVSTRLYN- 236
Query: 890 RTIDG--KPEYKNGL-DVLVKVIRYEGFFSLWKGFTPYYARLGPHTVLTFIFLEQMNKAY 1060
+ +DG + + GL D LVK+ R EG +L+KG P Y RLGPHT+L+ +F +++ K
Sbjct: 237 QPVDGAGRGQLYGGLTDCLVKIWRQEGPLALYKGLGPAYLRLGPHTILSMLFWDELRKLA 296
Query: 1061 KR 1066
+R
Sbjct: 297 RR 298
>ref|NP_001230286.1| solute carrier family 25, member 35 [Sus scrofa].
Length = 318
Score = 154 bits (388), Expect = 2e-37
Identities = 102/297 (34%), Positives = 150/297 (50%), Gaps = 11/297 (3%)
Frame = +2
Query: 203 SVKFLFGGLAGMGATVFVQPLDLVKNRMQLSGE----GAKTREYKTSFHALTSILRAEGL 370
++ FL GLA GA +F PL++VK RMQL GE G R Y+ FHA +I R +GL
Sbjct: 18 TMDFLMSGLAACGACLFTNPLEVVKTRMQLQGELQAPGTYQRHYRNVFHAFITIGRVDGL 77
Query: 371 RGIYTGLSAGLLRQATYTTTRLGIYTVLFER--LTGADGTPPGFLLKALIGMTAGATGAF 544
+ GL+ LL Q RLG Y + L A+GT + A G AG GA+
Sbjct: 78 AALQKGLAPALLYQFLMNGIRLGTYGLAEAGGYLHTAEGTLSP-VRSAAAGALAGVMGAY 136
Query: 545 VGTPAEVALIRMTADGRLPPDQRRGYKN--VFDALIRIVREEGVPTLWRGCIPTMARAVV 718
+G+P + + A YK+ +F AL +I ++ G+ LWRG + + R +V
Sbjct: 137 LGSPIYMVKTHLQAQAASEIAVGHQYKHQGMFQALTKIGQKHGLVGLWRGALGGLPRVIV 196
Query: 719 VNAAQLASYSQSKQFLLDSGYFS-DNILCHFCASMISGLVTTAASMPVDIAKTRIQNMRT 895
++ QL ++S +K + F + A+M+SG+ A P D+ TR+ N T
Sbjct: 197 GSSTQLCTFSSTKDLMTQWEIFPPQSWKVALAAAMVSGIAVVLAMTPFDVVSTRLYNQPT 256
Query: 896 -IDGKP-EYKNGLDVLVKVIRYEGFFSLWKGFTPYYARLGPHTVLTFIFLEQMNKAY 1060
GK Y+ LD L++ R EG F ++KG Y RLGPHT+L+ F +Q+ Y
Sbjct: 257 DAQGKGLMYRGLLDALLQTARTEGIFGMYKGLGASYFRLGPHTILSLFFWDQLRMLY 313
>ref|NP_001182044.1| mitochondrial uncoupling protein 4 [Sus scrofa].
Length = 328
Score = 143 bits (360), Expect = 3e-34
Identities = 92/283 (32%), Positives = 144/283 (50%), Gaps = 13/283 (4%)
Frame = +2
Query: 197 PKSVKFLFGGLAGMGATVFVQPLDLVKNRMQLSGEGAKTRE---------YKTSFHALTS 349
P++ KFL G A A + PLDL K R+Q+ GE A R Y+
Sbjct: 18 PRASKFLLSGCAATVAELATFPLDLTKTRLQIQGEAALARLGHGAREAALYRGMVRTALG 77
Query: 350 ILRAEGLRGIYTGLSAGLLRQATYTTTRLGIYTVLFERLTGADGTPPGFLLKALIG-MTA 526
I++ EG ++ G++ + R Y+ R+ Y L E + G L K++IG M A
Sbjct: 78 IVQEEGFLKLWQGVTPAIYRHIVYSGGRMVTYEHLREVVFGKGEDKHYPLWKSVIGGMMA 137
Query: 527 GATGAFVGTPAEVALIRMTADGRLPPDQRR-GYKNVFDALIRIVREEGVPTLWRGCIPTM 703
G G F+ P ++ ++M +G+ + + ++ V A +I+ E GV LW G +P +
Sbjct: 138 GVVGQFLANPTDLVKVQMQMEGKRKLEGKPLRFRGVHHAFAKILPEGGVRGLWAGWVPNI 197
Query: 704 ARAVVVNAAQLASYSQSKQFLLDSGYFSDNILCHFCASMISGLVTTAASMPVDIAKTRIQ 883
RA +VN L +Y K +L+ + DNI+ H +S+ SGLV + P D+ K+RI
Sbjct: 198 QRAALVNMGDLTTYDTVKHYLVLNTPLEDNIMTHGLSSLCSGLVASILGTPADVIKSRIM 257
Query: 884 NM-RTIDGKP-EYKNGLDVLVKVIRYEGFFSLWKGFTPYYARL 1006
N R G+ YK+ D LV+ ++ EGF SL+KGF P + R+
Sbjct: 258 NQPRDKQGRGLLYKSSTDCLVQAVQGEGFMSLYKGFLPSWLRM 300
Score = 67.0 bits (162), Expect = 2e-11
Identities = 48/173 (27%), Positives = 78/173 (45%), Gaps = 4/173 (2%)
Frame = +2
Query: 209 KFLFGGL-AGMGATVFVQPLDLVKNRMQLSGEG---AKTREYKTSFHALTSILRAEGLRG 376
K + GG+ AG+ P DLVK +MQ+ G+ K ++ HA IL G+RG
Sbjct: 129 KSVIGGMMAGVVGQFLANPTDLVKVQMQMEGKRKLEGKPLRFRGVHHAFAKILPEGGVRG 188
Query: 377 IYTGLSAGLLRQATYTTTRLGIYTVLFERLTGADGTPPGFLLKALIGMTAGATGAFVGTP 556
++ G + R A L Y + L + L + +G + +GTP
Sbjct: 189 LWAGWVPNIQRAALVNMGDLTTYDTVKHYLVLNTPLEDNIMTHGLSSLCSGLVASILGTP 248
Query: 557 AEVALIRMTADGRLPPDQRRGYKNVFDALIRIVREEGVPTLWRGCIPTMARAV 715
A+V R+ R + YK+ D L++ V+ EG +L++G +P+ R V
Sbjct: 249 ADVIKSRIMNQPRDKQGRGLLYKSSTDCLVQAVQGEGFMSLYKGFLPSWLRMV 301
>ref|XP_003133528.2| PREDICTED: calcium-binding mitochondrial carrier protein Aralar1-like
[Sus scrofa].
Length = 520
Score = 106 bits (265), Expect = 3e-23
Identities = 91/307 (29%), Positives = 137/307 (44%), Gaps = 7/307 (2%)
Frame = +2
Query: 209 KFLFGGLAGMGATVFVQPLDLVKNRMQLS-GEGAKTRE--YKTSFHALTSILRAEGLRGI 379
+F G +AG V P+DLVK RMQ G G+ E YK SF +LR EG G+
Sbjct: 172 RFTLGSVAGAVGATAVYPIDLVKTRMQNQRGSGSVVGELMYKNSFDCFKKVLRYEGFFGL 231
Query: 380 YTGLSAGLLRQATYTTTRLGIYTVLFERLTGADGTPPGFLLKALIGMTAGATGAFVGTPA 559
Y GL L+ A +L + + ++ T DG+ P L + L G AG + P
Sbjct: 232 YRGLIPQLIGVAPEKAIKLTVNDFVRDKFTRRDGSIP-LLAEVLAGGCAGGSQVIFTNPL 290
Query: 560 EVALIRMTADGRLPPDQRRGYKNVFDALIRIVREEGVPTLWRGCIPTMARAVVVNAAQLA 739
E+ IR+ G + R NV +R+ G+ L++G R + +A
Sbjct: 291 EIVKIRLQVAGEITTGPRVSALNV-------LRDLGLFGLYKGAKACFLRDIPFSAIYFP 343
Query: 740 SYSQSKQFLLD-SGYFSD-NILCHFCASMISGLVTTAASMPVDIAKTRIQNMRTIDGKPE 913
Y+ K L D +G+ N+L A ++G+ + P D+ KTR+Q + G+
Sbjct: 344 VYAHCKLLLADENGHVGGLNLL---AAGAMAGVPAASLVTPADVIKTRLQ-VAARAGQTT 399
Query: 914 YKNGLDVLVKVIRYEGFFSLWKGFTPYYARLGPHTVLTFIFLEQMNKAYKRLFLSD*GGS 1093
Y +D K++R EG + WKG R P +T + E + +R F D GG
Sbjct: 400 YSGVIDCFRKILREEGPSAFWKGTAARVFRSSPQFGVTLVTYELL----QRWFYIDFGGL 455
Query: 1094 R--GPEP 1108
+ G EP
Sbjct: 456 KPSGSEP 462
Score = 71.2 bits (173), Expect = 1e-12
Identities = 58/198 (29%), Positives = 86/198 (43%), Gaps = 4/198 (2%)
Frame = +2
Query: 197 PKSVKFLFGGLAGMGATVFVQPLDLVKNRMQLSGE---GAKTREYKTSFHALTSILRAEG 367
P + L GG AG +F PL++VK R+Q++GE G + + ++LR G
Sbjct: 268 PLLAEVLAGGCAGGSQVIFTNPLEIVKIRLQVAGEITTGPRV--------SALNVLRDLG 319
Query: 368 LRGIYTGLSAGLLRQATYTTTRLGIYTVLFERLTGADGTPPGFLLKALIGMTAGATGAFV 547
L G+Y G A LR ++ +Y L +G G L A G AG A +
Sbjct: 320 LFGLYKGAKACFLRDIPFSAIYFPVYAHCKLLLADENGHVGGLNLLA-AGAMAGVPAASL 378
Query: 548 GTPAEVALIRMTADGRLPPDQRRGYKNVFDALIRIVREEGVPTLWRGCIPTMARAVVVNA 727
TPA+V R+ R + Y V D +I+REEG W+G + R+
Sbjct: 379 VTPADVIKTRLQVAARA---GQTTYSGVIDCFRKILREEGPSAFWKGTAARVFRSSPQFG 435
Query: 728 AQLASYS-QSKQFLLDSG 778
L +Y + F +D G
Sbjct: 436 VTLVTYELLQRWFYIDFG 453
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 37,208,315
Number of extensions: 1121219
Number of successful extensions: 4765
Number of sequences better than 1.0e-05: 46
Number of HSP's gapped: 4583
Number of HSP's successfully gapped: 80
Length of query: 476
Length of database: 11,343,932
Length adjustment: 103
Effective length of query: 373
Effective length of database: 8,779,541
Effective search space: 3274768793
Effective search space used: 3274768793
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002235
(1428 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr12 529 e-147
>Sscrofa_Chr12
|| Length = 63588571
Score = 529 bits (267), Expect = e-147
Identities = 323/341 (94%), Gaps = 3/341 (0%)
Strand = Plus / Plus
Query: 1068 tcttcctcagtgactgaggcgggagcagaggcccggagccgctgtgccgggggctcccac 1127
|||||||| ||| |||||| ||||||||||||||||||||||||||| ||||||||||||
Sbjct: 54042097 tcttcctc-gtggctgaggtgggagcagaggcccggagccgctgtgcagggggctcccac 54042155
Query: 1128 ttgcccgctgcttctacagtcagtgcgnnnnnnnngggggacctagactctgctgccctg 1187
||||||||||||||||||||||||||| ||||| |||||||||||||||||||
Sbjct: 54042156 ttgcccgctgcttctacagtcagtgcgccccccccggggggcctagactctgctgccctg 54042215
Query: 1188 ngcccctctatttattacccctccaccgtgtggtcccctcctctgcggtaaagaccttgg 1247
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 54042216 ggcccctctatttattacccctccaccgtgtggtcccctcctctgcggtaaagaccttgg 54042275
Query: 1248 tgtgtcctgcccctgctccagcttgccctgccccacttgtcgccatcgtcatgatctctg 1307
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 54042276 tgtgtcctgcccctgctccagcttgccctgcccaacttgtcgccatcgtcatgatctctg 54042335
Query: 1308 tccccggctgtaccttgngggagctgggaggctccacgcggaatttccggcttcccc-tg 1366
||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| ||
Sbjct: 54042336 tccccggctgtaccttgggggagctgggaggctccacgcgg-atttccggcttccccttg 54042394
Query: 1367 ggtattagttgagggcacagaggacagcaggcgacctgtgc 1407
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 54042395 ggtattagttgagggcacagaggacagcaggcgacctgtgc 54042435
Score = 414 bits (209), Expect = e-113
Identities = 209/209 (100%)
Strand = Plus / Plus
Query: 387 ggctgtcagctggcctgcttcgccaggccacctataccaccactcgccttggtatctata 446
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 54040609 ggctgtcagctggcctgcttcgccaggccacctataccaccactcgccttggtatctata 54040668
Query: 447 ccgtgctgtttgagcgcctgactggggctgacggtacaccccctggctttctgctgaagg 506
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 54040669 ccgtgctgtttgagcgcctgactggggctgacggtacaccccctggctttctgctgaagg 54040728
Query: 507 ccctgattggcatgactgcaggcgcaactggtgcctttgtgggaacgccagctgaggtgg 566
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 54040729 ccctgattggcatgactgcaggcgcaactggtgcctttgtgggaacgccagctgaggtgg 54040788
Query: 567 ctcttatccgcatgactgctgatggccgg 595
|||||||||||||||||||||||||||||
Sbjct: 54040789 ctcttatccgcatgactgctgatggccgg 54040817
Score = 394 bits (199), Expect = e-107
Identities = 220/227 (96%)
Strand = Plus / Plus
Query: 928 ggatgtgctggtgaaggtcatccgctatgagggcttcttcagcctatggaagggctttac 987
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 54041725 ggatgtgctggtgaaggtcatccgctatgagggcttcttcagcctatggaagggctttac 54041784
Query: 988 gccgtactatgcccgtctgggcccccacaccgtcctcaccttcatcttcttggagcagat 1047
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 54041785 gccgtactatgcccgtctgggcccccacaccgtcctcaccttcatcttcttggagcagat 54041844
Query: 1048 gaacaaggcctacaagcgtctcttcctcagtgactgaggcgggagcagaggcccggagcc 1107
||||||||||||| |||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 54041845 gaacaaggcctactagcgtctcttcctcagtggctgaggcgttagcagaggcccggagcc 54041904
Query: 1108 gctgtgccgggggctcccacttgcccgctgcttctacagtcagtgcg 1154
||||||||| | |||||||||||| ||||||||||||||||||||||
Sbjct: 54041905 gctgtgccgcgtgctcccacttgcacgctgcttctacagtcagtgcg 54041951
Score = 307 bits (155), Expect = 9e-81
Identities = 155/155 (100%)
Strand = Plus / Plus
Query: 234 ggatgggagcaacagtttttgtacagcccctggacctggtgaagaaccggatgcagttga 293
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 54040370 ggatgggagcaacagtttttgtacagcccctggacctggtgaagaaccggatgcagttga 54040429
Query: 294 gtggagaaggagccaagacacgagagtacaaaaccagcttccatgccctcacgagcatcc 353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 54040430 gtggagaaggagccaagacacgagagtacaaaaccagcttccatgccctcacgagcatcc 54040489
Query: 354 tgagggcggaaggcctgaggggcatttatacaggg 388
|||||||||||||||||||||||||||||||||||
Sbjct: 54040490 tgagggcggaaggcctgaggggcatttatacaggg 54040524
Score = 256 bits (129), Expect = 3e-65
Identities = 129/129 (100%)
Strand = Plus / Plus
Query: 107 acgggaccgggagccgagggccattgagtggcgatggcggcgacggcgagtcccggggcc 166
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 54039641 acgggaccgggagccgagggccattgagtggcgatggcggcgacggcgagtcccggggcc 54039700
Query: 167 ggtgggatggacgcgaagccccgtacctcccctaagtcggtcaagttcctgtttgggggc 226
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 54039701 ggtgggatggacgcgaagccccgtacctcccctaagtcggtcaagttcctgtttgggggc 54039760
Query: 227 ctggccggg 235
|||||||||
Sbjct: 54039761 ctggccggg 54039769
Score = 206 bits (104), Expect = 2e-50
Identities = 104/104 (100%)
Strand = Plus / Plus
Query: 774 caggctacttctctgacaacatcctgtgccacttctgtgccagcatgatcagtggcctgg 833
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 54041352 caggctacttctctgacaacatcctgtgccacttctgtgccagcatgatcagtggcctgg 54041411
Query: 834 tcaccactgccgcctctatgcctgtggacattgccaagacccgg 877
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 54041412 tcaccactgccgcctctatgcctgtggacattgccaagacccgg 54041455
Score = 184 bits (93), Expect = 9e-44
Identities = 93/93 (100%)
Strand = Plus / Plus
Query: 594 ggcttccacctgaccagcgccggggctacaaaaatgtatttgacgccttgattcgaattg 653
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 54041002 ggcttccacctgaccagcgccggggctacaaaaatgtatttgacgccttgattcgaattg 54041061
Query: 654 tccgggaagaaggggtccccacactatggaggg 686
|||||||||||||||||||||||||||||||||
Sbjct: 54041062 tccgggaagaaggggtccccacactatggaggg 54041094
Score = 184 bits (93), Expect = 9e-44
Identities = 93/93 (100%)
Strand = Plus / Plus
Query: 685 gggctgcatccctaccatggctcgggccgtcgtcgtcaatgccgcccagctcgcctccta 744
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 54041177 gggctgcatccctaccatggctcgggccgtcgtcgtcaatgccgcccagctcgcctccta 54041236
Query: 745 ctctcagtccaagcagtttttactggactcagg 777
|||||||||||||||||||||||||||||||||
Sbjct: 54041237 ctctcagtccaagcagtttttactggactcagg 54041269
Score = 107 bits (54), Expect = 2e-20
Identities = 54/54 (100%)
Strand = Plus / Plus
Query: 876 ggatccagaacatgcgaacgattgacgggaagccggaatacaagaacgggctgg 929
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 54041535 ggatccagaacatgcgaacgattgacgggaagccggaatacaagaacgggctgg 54041588
Score = 75.8 bits (38), Expect = 6e-11
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 3 cttccagctagcgctggacctgagagccggaggggtgt 40
||||||||||||||||||||||||||||||||||||||
Sbjct: 54039537 cttccagctagcgctggacctgagagccggaggggtgt 54039574
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 30,260,776
Number of extensions: 161
Number of successful extensions: 161
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 160
Number of HSP's successfully gapped: 11
Length of query: 1428
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 1407
Effective length of database: 2,808,413,156
Effective search space: 3951437310492
Effective search space used: 3951437310492
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)