Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002326
(1088 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001039856.1| leukotriene-B(4) omega-hydroxylase 2 [Bos ta... 629 e-180
Alignment gi|NP_001030214.1| cytochrome P450, family 4, subfamily F, poly... 534 e-152
Alignment gi|XP_002688602.1| PREDICTED: cytochrome P450, family 4, subfam... 532 e-151
Alignment gi|XP_002704774.1| PREDICTED: cytochrome P450, family 4, subfam... 532 e-151
Alignment gi|XP_002688601.1| PREDICTED: cytochrome P450, family 4, subfam... 523 e-148
Alignment gi|XP_586481.3| PREDICTED: cytochrome P450, family 4, subfamily... 523 e-148
Alignment gi|NP_001068790.1| cytochrome P450, family 4, subfamily F, poly... 515 e-146
Alignment gi|XP_002688603.1| PREDICTED: cytochrome P450, family 4, subfam... 417 e-117
Alignment gi|NP_001092460.1| cytochrome P450, family 4, subfamily A, poly... 243 2e-64
Alignment gi|NP_001071376.1| cytochrome P450, family 4, subfamily A, poly... 242 5e-64
>ref|NP_001039856.1| leukotriene-B(4) omega-hydroxylase 2 [Bos taurus].
Length = 522
Score = 629 bits (1622), Expect = e-180
Identities = 296/350 (84%), Positives = 323/350 (92%)
Frame = +3
Query: 39 MLQLSLSWLGLGPVSASPWLLLQLVGATWLLSRILSWIYNFYDNCCRLRCFPQPPKRNWF 218
ML+LSLSWLGLGPV+ASPWLLL LVGA+W+L+RIL+WIY FYDNCCRLRCFPQPPKR+WF
Sbjct: 1 MLELSLSWLGLGPVAASPWLLLLLVGASWILARILAWIYAFYDNCCRLRCFPQPPKRSWF 60
Query: 219 WGHLGLAKNNEEGMRLVEDLGHCFRDVHLWWLGPLYPVLRLVHPNFVAPLLQAPATIIPK 398
WGHLGLA++NEE MRLVE+LGH FRDVHLWW+GP +P+LRLVHPNFVAPLLQA ATIIPK
Sbjct: 61 WGHLGLAQSNEESMRLVEELGHYFRDVHLWWMGPFFPILRLVHPNFVAPLLQASATIIPK 120
Query: 399 DMLFYSFLKPWLGVGLLLSAGEKWSHQRRLLTPAFHFDILKSYVKIFNRSADIMHAKWQH 578
DM FYSFLKPWLG GLLLSAG+KWS RRLLTPAFHF+ILK Y+KIFN+SADIMHAKWQ
Sbjct: 121 DMFFYSFLKPWLGDGLLLSAGDKWSSHRRLLTPAFHFEILKPYMKIFNKSADIMHAKWQR 180
Query: 579 LASEGHTRLDMFEHISLMTLDSLQKCVFSFDSNCQEKPSEYIAAISELSALVTKRNEQIF 758
LA EG TRLDMFEHISLMTLDSLQKCVFS+DSNCQEKPSEYIAAI ELSALV KR + IF
Sbjct: 181 LALEGSTRLDMFEHISLMTLDSLQKCVFSYDSNCQEKPSEYIAAILELSALVMKRIKHIF 240
Query: 759 LHKDFLYYLTPEGRRFRKACRLVHDFTDAVIQERRRTLISQGSQDFLRAKAKAKTLDFID 938
LH DFLYYLT +G+RF +ACRLVHDFTDA+IQ+RRRTLISQGSQ+FL+ K KAKTLDFID
Sbjct: 241 LHVDFLYYLTRDGQRFYRACRLVHDFTDAIIQKRRRTLISQGSQEFLKTKTKAKTLDFID 300
Query: 939 VLLLAKDEDGKGLSDEDIRTEADTFMFAGHDTTASGLSWVLYNLXKHPEY 1088
VLLLAKDEDGKGL DEDIR EADTFMF GHDTTASGLSW+LYNL KHPEY
Sbjct: 301 VLLLAKDEDGKGLPDEDIRAEADTFMFEGHDTTASGLSWILYNLAKHPEY 350
>ref|NP_001030214.1| cytochrome P450, family 4, subfamily F, polypeptide 2 [Bos taurus].
Length = 524
Score = 534 bits (1375), Expect = e-152
Identities = 252/350 (72%), Positives = 288/350 (82%)
Frame = +3
Query: 39 MLQLSLSWLGLGPVSASPWLLLQLVGATWLLSRILSWIYNFYDNCCRLRCFPQPPKRNWF 218
ML+LSLSWLGLGPV+ASPWLLL GA+WLL+RIL+W Y FY+N RL+CFPQPPKRNWF
Sbjct: 1 MLELSLSWLGLGPVAASPWLLLLFTGASWLLARILAWTYTFYNNSRRLQCFPQPPKRNWF 60
Query: 219 WGHLGLAKNNEEGMRLVEDLGHCFRDVHLWWLGPLYPVLRLVHPNFVAPLLQAPATIIPK 398
GHLGL E+GM + +L + W+GP+ P++ HP+ + + A A + PK
Sbjct: 61 LGHLGLVPPTEQGMSKLTELVAKYSQGFRIWMGPITPIIVFCHPDLIRIVANASAAVAPK 120
Query: 399 DMLFYSFLKPWLGVGLLLSAGEKWSHQRRLLTPAFHFDILKSYVKIFNRSADIMHAKWQH 578
D++FY LKPWLG GLLLSAG+KWS RR+LTPAFHF+ILK Y+KIF +S DIMHAKWQH
Sbjct: 121 DVIFYEVLKPWLGDGLLLSAGDKWSRHRRMLTPAFHFNILKPYMKIFTKSTDIMHAKWQH 180
Query: 579 LASEGHTRLDMFEHISLMTLDSLQKCVFSFDSNCQEKPSEYIAAISELSALVTKRNEQIF 758
L EGHT LDMFEHISLMTLDSLQKC+FS+DSNCQEKPSEYIAAI ELSALV KR+++IF
Sbjct: 181 LIKEGHTHLDMFEHISLMTLDSLQKCIFSYDSNCQEKPSEYIAAILELSALVAKRHQEIF 240
Query: 759 LHKDFLYYLTPEGRRFRKACRLVHDFTDAVIQERRRTLISQGSQDFLRAKAKAKTLDFID 938
LH DFLYYLTP+GRRFR+ACRLVHDFTDAVIQE RTL S+ DFL+AKAK KTLDFID
Sbjct: 241 LHMDFLYYLTPDGRRFRRACRLVHDFTDAVIQEWHRTLPSESIDDFLKAKAKTKTLDFID 300
Query: 939 VLLLAKDEDGKGLSDEDIRTEADTFMFAGHDTTASGLSWVLYNLXKHPEY 1088
VLLL KDEDGKGLSDEDIR EADTFMF GHDTTASGLSW+LYNL KH EY
Sbjct: 301 VLLLTKDEDGKGLSDEDIRAEADTFMFEGHDTTASGLSWILYNLAKHQEY 350
>ref|XP_002688602.1| PREDICTED: cytochrome P450, family 4, subfamily F, polypeptide 2-like
[Bos taurus].
Length = 524
Score = 532 bits (1371), Expect = e-151
Identities = 254/350 (72%), Positives = 288/350 (82%)
Frame = +3
Query: 39 MLQLSLSWLGLGPVSASPWLLLQLVGATWLLSRILSWIYNFYDNCCRLRCFPQPPKRNWF 218
ML+LSLSWLGLGPV+ASPWLLL LVGA+W+L+ +L+W Y Y+N RLRCFPQPPKRNWF
Sbjct: 1 MLELSLSWLGLGPVAASPWLLLLLVGASWILAHVLAWTYTSYNNSLRLRCFPQPPKRNWF 60
Query: 219 WGHLGLAKNNEEGMRLVEDLGHCFRDVHLWWLGPLYPVLRLVHPNFVAPLLQAPATIIPK 398
GHLGL E+G+ V L + +L W+GP+ P++ HP+ + A A I PK
Sbjct: 61 LGHLGLVPPTEQGLSKVTQLVTNYPQGYLMWMGPIIPLVIFCHPDLIRTFASASAAIAPK 120
Query: 399 DMLFYSFLKPWLGVGLLLSAGEKWSHQRRLLTPAFHFDILKSYVKIFNRSADIMHAKWQH 578
+++FY+FLKPWLG GLLLSAG+KWS RR+LTPAFHF+ILK Y+KIF +SADIMHAKWQ
Sbjct: 121 NVVFYNFLKPWLGDGLLLSAGDKWSSHRRMLTPAFHFNILKPYMKIFTKSADIMHAKWQR 180
Query: 579 LASEGHTRLDMFEHISLMTLDSLQKCVFSFDSNCQEKPSEYIAAISELSALVTKRNEQIF 758
L EGHT LDMFEHISLMTLDSLQKCVFS+DSNCQEKPS+YIAAI ELSALV KR +QIF
Sbjct: 181 LIIEGHTHLDMFEHISLMTLDSLQKCVFSYDSNCQEKPSDYIAAILELSALVAKRYQQIF 240
Query: 759 LHKDFLYYLTPEGRRFRKACRLVHDFTDAVIQERRRTLISQGSQDFLRAKAKAKTLDFID 938
LH DFLYYLTP+G RFR+ACRLVHDFT AVIQERRRTL + DFL+AK K KTLDFID
Sbjct: 241 LHMDFLYYLTPDGWRFRRACRLVHDFTGAVIQERRRTLPKEDIDDFLKAKEKTKTLDFID 300
Query: 939 VLLLAKDEDGKGLSDEDIRTEADTFMFAGHDTTASGLSWVLYNLXKHPEY 1088
VLLL KDEDGKGLSDEDIR EADTFMF GHDTTASGLSWVLYNL KHPEY
Sbjct: 301 VLLLTKDEDGKGLSDEDIRAEADTFMFEGHDTTASGLSWVLYNLAKHPEY 350
>ref|XP_002704774.1| PREDICTED: cytochrome P450, family 4, subfamily F, polypeptide 2-like
[Bos taurus].
Length = 524
Score = 532 bits (1371), Expect = e-151
Identities = 254/350 (72%), Positives = 288/350 (82%)
Frame = +3
Query: 39 MLQLSLSWLGLGPVSASPWLLLQLVGATWLLSRILSWIYNFYDNCCRLRCFPQPPKRNWF 218
ML+LSLSWLGLGPV+ASPWLLL LVGA+W+L+ +L+W Y Y+N RLRCFPQPPKRNWF
Sbjct: 1 MLELSLSWLGLGPVAASPWLLLLLVGASWILAHVLAWTYTSYNNSLRLRCFPQPPKRNWF 60
Query: 219 WGHLGLAKNNEEGMRLVEDLGHCFRDVHLWWLGPLYPVLRLVHPNFVAPLLQAPATIIPK 398
GHLGL E+G+ V L + +L W+GP+ P++ HP+ + A A I PK
Sbjct: 61 LGHLGLVPPTEQGLSKVTQLVTNYPQGYLMWMGPIIPLVIFCHPDLIRTFASASAAIAPK 120
Query: 399 DMLFYSFLKPWLGVGLLLSAGEKWSHQRRLLTPAFHFDILKSYVKIFNRSADIMHAKWQH 578
+++FY+FLKPWLG GLLLSAG+KWS RR+LTPAFHF+ILK Y+KIF +SADIMHAKWQ
Sbjct: 121 NVVFYNFLKPWLGDGLLLSAGDKWSSHRRMLTPAFHFNILKPYMKIFTKSADIMHAKWQR 180
Query: 579 LASEGHTRLDMFEHISLMTLDSLQKCVFSFDSNCQEKPSEYIAAISELSALVTKRNEQIF 758
L EGHT LDMFEHISLMTLDSLQKCVFS+DSNCQEKPS+YIAAI ELSALV KR +QIF
Sbjct: 181 LIIEGHTHLDMFEHISLMTLDSLQKCVFSYDSNCQEKPSDYIAAILELSALVAKRYQQIF 240
Query: 759 LHKDFLYYLTPEGRRFRKACRLVHDFTDAVIQERRRTLISQGSQDFLRAKAKAKTLDFID 938
LH DFLYYLTP+G RFR+ACRLVHDFT AVIQERRRTL + DFL+AK K KTLDFID
Sbjct: 241 LHMDFLYYLTPDGWRFRRACRLVHDFTGAVIQERRRTLPKEDIDDFLKAKEKTKTLDFID 300
Query: 939 VLLLAKDEDGKGLSDEDIRTEADTFMFAGHDTTASGLSWVLYNLXKHPEY 1088
VLLL KDEDGKGLSDEDIR EADTFMF GHDTTASGLSWVLYNL KHPEY
Sbjct: 301 VLLLTKDEDGKGLSDEDIRAEADTFMFEGHDTTASGLSWVLYNLAKHPEY 350
>ref|XP_002688601.1| PREDICTED: cytochrome P450, family 4, subfamily F, polypeptide 2-like
[Bos taurus].
Length = 523
Score = 523 bits (1347), Expect = e-148
Identities = 250/350 (71%), Positives = 286/350 (81%)
Frame = +3
Query: 39 MLQLSLSWLGLGPVSASPWLLLQLVGATWLLSRILSWIYNFYDNCCRLRCFPQPPKRNWF 218
ML+LSLSWLGL PV+ASPWLLL LVGA+W+L+ +L+W Y FY+N L+CFPQPPKRNWF
Sbjct: 1 MLELSLSWLGLRPVAASPWLLLVLVGASWILAHVLAWTYTFYNNSRHLQCFPQPPKRNWF 60
Query: 219 WGHLGLAKNNEEGMRLVEDLGHCFRDVHLWWLGPLYPVLRLVHPNFVAPLLQAPATIIPK 398
GH+G E+G+R L + LGP P++ HP+ + + A A PK
Sbjct: 61 LGHMGQYPPTEKGLRDFTQLVANYPQGFRICLGPAIPIIIFCHPDMIRIVANASAAAAPK 120
Query: 399 DMLFYSFLKPWLGVGLLLSAGEKWSHQRRLLTPAFHFDILKSYVKIFNRSADIMHAKWQH 578
D++FY FLKPWLG GLLLSAG+KWS RR+LTPAFHF+ILK Y+KIF +SADIMHAKWQ
Sbjct: 121 DVIFYDFLKPWLGDGLLLSAGDKWSRHRRMLTPAFHFNILKPYMKIFTKSADIMHAKWQR 180
Query: 579 LASEGHTRLDMFEHISLMTLDSLQKCVFSFDSNCQEKPSEYIAAISELSALVTKRNEQIF 758
L +EGHT LDMFEHISLMTLDSLQKCVFS+DSNCQEKP+EYIA+I ELSALV KRN+QIF
Sbjct: 181 LITEGHTHLDMFEHISLMTLDSLQKCVFSYDSNCQEKPNEYIASILELSALVAKRNQQIF 240
Query: 759 LHKDFLYYLTPEGRRFRKACRLVHDFTDAVIQERRRTLISQGSQDFLRAKAKAKTLDFID 938
LH DFLY+LTP+ RRFR+ACRLVHDFTDAVIQERR TL S+G+ DFL+AK K KTLDFID
Sbjct: 241 LHMDFLYFLTPDWRRFRRACRLVHDFTDAVIQERRHTLPSEGTDDFLKAKVKTKTLDFID 300
Query: 939 VLLLAKDEDGKGLSDEDIRTEADTFMFAGHDTTASGLSWVLYNLXKHPEY 1088
VLLL KDEDGKGLSDEDIR EADTFMF GHDTTASGLSWVLYNL KHPEY
Sbjct: 301 VLLLTKDEDGKGLSDEDIRAEADTFMFEGHDTTASGLSWVLYNLAKHPEY 350
>ref|XP_586481.3| PREDICTED: cytochrome P450, family 4, subfamily F, polypeptide 2-like
[Bos taurus].
Length = 523
Score = 523 bits (1347), Expect = e-148
Identities = 250/350 (71%), Positives = 286/350 (81%)
Frame = +3
Query: 39 MLQLSLSWLGLGPVSASPWLLLQLVGATWLLSRILSWIYNFYDNCCRLRCFPQPPKRNWF 218
ML+LSLSWLGL PV+ASPWLLL LVGA+W+L+ +L+W Y FY+N L+CFPQPPKRNWF
Sbjct: 1 MLELSLSWLGLRPVAASPWLLLVLVGASWILAHVLAWTYTFYNNSRHLQCFPQPPKRNWF 60
Query: 219 WGHLGLAKNNEEGMRLVEDLGHCFRDVHLWWLGPLYPVLRLVHPNFVAPLLQAPATIIPK 398
GH+G E+G+R L + LGP P++ HP+ + + A A PK
Sbjct: 61 LGHMGQYPPTEKGLRDFTQLVANYPQGFRICLGPAIPIIIFCHPDMIRIVANASAAAAPK 120
Query: 399 DMLFYSFLKPWLGVGLLLSAGEKWSHQRRLLTPAFHFDILKSYVKIFNRSADIMHAKWQH 578
D++FY FLKPWLG GLLLSAG+KWS RR+LTPAFHF+ILK Y+KIF +SADIMHAKWQ
Sbjct: 121 DVIFYDFLKPWLGDGLLLSAGDKWSRHRRMLTPAFHFNILKPYMKIFTKSADIMHAKWQR 180
Query: 579 LASEGHTRLDMFEHISLMTLDSLQKCVFSFDSNCQEKPSEYIAAISELSALVTKRNEQIF 758
L +EGHT LDMFEHISLMTLDSLQKCVFS+DSNCQEKP+EYIA+I ELSALV KRN+QIF
Sbjct: 181 LITEGHTHLDMFEHISLMTLDSLQKCVFSYDSNCQEKPNEYIASILELSALVAKRNQQIF 240
Query: 759 LHKDFLYYLTPEGRRFRKACRLVHDFTDAVIQERRRTLISQGSQDFLRAKAKAKTLDFID 938
LH DFLY+LTP+ RRFR+ACRLVHDFTDAVIQERR TL S+G+ DFL+AK K KTLDFID
Sbjct: 241 LHMDFLYFLTPDWRRFRRACRLVHDFTDAVIQERRHTLPSEGTDDFLKAKVKTKTLDFID 300
Query: 939 VLLLAKDEDGKGLSDEDIRTEADTFMFAGHDTTASGLSWVLYNLXKHPEY 1088
VLLL KDEDGKGLSDEDIR EADTFMF GHDTTASGLSWVLYNL KHPEY
Sbjct: 301 VLLLTKDEDGKGLSDEDIRAEADTFMFEGHDTTASGLSWVLYNLAKHPEY 350
>ref|NP_001068790.1| cytochrome P450, family 4, subfamily F, polypeptide 2 [Bos taurus].
Length = 523
Score = 515 bits (1327), Expect = e-146
Identities = 244/350 (69%), Positives = 285/350 (81%)
Frame = +3
Query: 39 MLQLSLSWLGLGPVSASPWLLLQLVGATWLLSRILSWIYNFYDNCCRLRCFPQPPKRNWF 218
ML+LSLS LGLGP++ASPWLL L G +W+L+R+L+W Y FY+N RLRCF QPPK NWF
Sbjct: 1 MLELSLSRLGLGPLAASPWLLPLLAGVSWILARVLAWTYTFYNNSRRLRCFLQPPKPNWF 60
Query: 219 WGHLGLAKNNEEGMRLVEDLGHCFRDVHLWWLGPLYPVLRLVHPNFVAPLLQAPATIIPK 398
GH+ L + E+G+ + + +L W GP+ P++ HP+ + + A A I PK
Sbjct: 61 LGHMNLVPSTEQGLIYFTQMAANYPRGYLIWFGPIIPMVIFCHPDMLRSITNASAAIAPK 120
Query: 399 DMLFYSFLKPWLGVGLLLSAGEKWSHQRRLLTPAFHFDILKSYVKIFNRSADIMHAKWQH 578
DM FY LKPWLG GLLLSAG+KWS RR+LTPAFHF+ILK Y+KIF +SA+IMHAKW+H
Sbjct: 121 DMQFYGTLKPWLGDGLLLSAGDKWSSHRRMLTPAFHFNILKPYIKIFTKSAEIMHAKWEH 180
Query: 579 LASEGHTRLDMFEHISLMTLDSLQKCVFSFDSNCQEKPSEYIAAISELSALVTKRNEQIF 758
L +EGHT LDMFEHISL+TLD+LQKCVFSFDSNCQEKPSEYIAAI ELSALV+KRN+Q+F
Sbjct: 181 LITEGHTHLDMFEHISLLTLDNLQKCVFSFDSNCQEKPSEYIAAILELSALVSKRNQQLF 240
Query: 759 LHKDFLYYLTPEGRRFRKACRLVHDFTDAVIQERRRTLISQGSQDFLRAKAKAKTLDFID 938
L+ DFLYYLT +G+RFR ACRLVHDFTDAVIQERRRTL + DFL+AKAK KTLDFID
Sbjct: 241 LYMDFLYYLTSDGQRFRNACRLVHDFTDAVIQERRRTLPKENIDDFLKAKAKTKTLDFID 300
Query: 939 VLLLAKDEDGKGLSDEDIRTEADTFMFAGHDTTASGLSWVLYNLXKHPEY 1088
VLLL KDEDGKGLSDEDIR EADTFMF GHDTTASGLSW+LYNL KHPEY
Sbjct: 301 VLLLTKDEDGKGLSDEDIRAEADTFMFEGHDTTASGLSWILYNLAKHPEY 350
>ref|XP_002688603.1| PREDICTED: cytochrome P450, family 4, subfamily F, polypeptide
22-like [Bos taurus].
Length = 531
Score = 417 bits (1073), Expect = e-117
Identities = 207/325 (63%), Positives = 249/325 (76%), Gaps = 4/325 (1%)
Frame = +3
Query: 126 LLSRILSWIYNFYDNCCRLRCFPQPPKRNWFWGHLGLAKNNEEGM----RLVEDLGHCFR 293
LL + L + FY C RLRCFPQPP+RNW GHLG+ NE G+ ++++D+ H
Sbjct: 38 LLLQFLRLCWGFYITCRRLRCFPQPPRRNWLLGHLGMYLPNERGLQDEKKVLDDMHH--- 94
Query: 294 DVHLWWLGPLYPVLRLVHPNFVAPLLQAPATIIPKDMLFYSFLKPWLGVGLLLSAGEKWS 473
V L WLGP+ P++ LVHP+++ PL+ A A + PKD LFY FLKPWLG GLLLS G+KWS
Sbjct: 95 -VILVWLGPVLPLVVLVHPDYIKPLVGASAAVAPKDDLFYGFLKPWLGDGLLLSRGDKWS 153
Query: 474 HQRRLLTPAFHFDILKSYVKIFNRSADIMHAKWQHLASEGHTRLDMFEHISLMTLDSLQK 653
RRLLTPAFHFDILK Y+KIFN+ AD MHAKW+ LA LDMFEH+SLMTLD LQK
Sbjct: 154 RHRRLLTPAFHFDILKPYMKIFNQCADTMHAKWRGLAEGSEVSLDMFEHVSLMTLDCLQK 213
Query: 654 CVFSFDSNCQEKPSEYIAAISELSALVTKRNEQIFLHKDFLYYLTPEGRRFRKACRLVHD 833
CVFS++SNCQEK S+YI+AI ELSALV +R ++ + DF+YY T +GRRFR+AC VH
Sbjct: 214 CVFSYNSNCQEKMSDYISAIIELSALVVRRQYRLHHYLDFIYYRTADGRRFRQACDTVHG 273
Query: 834 FTDAVIQERRRTLISQGSQDFLRAKAKAKTLDFIDVLLLAKDEDGKGLSDEDIRTEADTF 1013
FT VIQERRR L QG++ + +AK + KTLDFIDVLLLAKDEDGK LSDEDIR EADTF
Sbjct: 274 FTTEVIQERRRALRQQGAEAWFKAK-QGKTLDFIDVLLLAKDEDGKELSDEDIRAEADTF 332
Query: 1014 MFAGHDTTASGLSWVLYNLXKHPEY 1088
MF GHDTT+SGLSWVL+NL K+PEY
Sbjct: 333 MFEGHDTTSSGLSWVLFNLAKYPEY 357
>ref|NP_001092460.1| cytochrome P450, family 4, subfamily A, polypeptide 22 [Bos taurus].
Length = 515
Score = 243 bits (620), Expect = 2e-64
Identities = 148/361 (40%), Positives = 207/361 (57%), Gaps = 2/361 (0%)
Frame = +3
Query: 12 VGLVAPDRRMLQLSLSWLGLGPVSASPWLLLQLVGATWLLSRILSWIYNFYDNCCRLRCF 191
V +++P R + +S GL V + L+L L+ A L R W+ L F
Sbjct: 3 VSVLSPTRALGGVS----GLLQVVSLLGLVLLLLKAAQLYLR-RQWLLK------ALHQF 51
Query: 192 PQPPKRNWFWGHLGLAKNNEEGMRLVEDLGHCFRDVHLWWLGPLYPVLRLVHPNFVAPLL 371
P PP +WF+GH + E L+E + + + WL ++ + P+++ L
Sbjct: 52 PSPPS-HWFYGHKKEFQKESELPPLLERVEK-YPKACVRWLWGTKALVLVYDPDYMKVFL 109
Query: 372 QAPATIIPKDMLFYSFLKPWLGVGLLLSAGEKWSHQRRLLTPAFHFDILKSYVKIFNRSA 551
PK Y +L PW+G GLLL G+KW RR+LTPAF +DILK+YV I S
Sbjct: 110 GRSD---PKPHRTYKYLAPWIGTGLLLLEGQKWFQHRRMLTPAFRYDILKAYVGIMADSV 166
Query: 552 DIMHAKWQHLASEGHTRLDMFEHISLMTLDSLQKCVFSFDSNCQEKPSE--YIAAISELS 725
+M KW+ L S+ + L++F H+SLMTLD++ KC FS + Q S YI AI +LS
Sbjct: 167 RVMLDKWEELVSQD-SHLEIFGHVSLMTLDTIMKCAFSHQGSVQMDRSSQSYIQAIRDLS 225
Query: 726 ALVTKRNEQIFLHKDFLYYLTPEGRRFRKACRLVHDFTDAVIQERRRTLISQGSQDFLRA 905
L+ R F D +Y LTPEGR +AC+L H TDAVI+ER+ L +G + +R+
Sbjct: 226 HLIVSRLRNAFHQNDLIYRLTPEGRWNHRACQLTHQHTDAVIKERKAHLQKEGELEKVRS 285
Query: 906 KAKAKTLDFIDVLLLAKDEDGKGLSDEDIRTEADTFMFAGHDTTASGLSWVLYNLXKHPE 1085
+ + LDF+D+LLLA+ E+G LSDED+R E DTFMF GHDTTASG+SW+LY L HPE
Sbjct: 286 R---RHLDFLDILLLARMENGSSLSDEDLRAEVDTFMFEGHDTTASGISWILYALASHPE 342
Query: 1086 Y 1088
+
Sbjct: 343 H 343
>ref|NP_001071376.1| cytochrome P450, family 4, subfamily A, polypeptide 11 [Bos taurus].
Length = 514
Score = 242 bits (617), Expect = 5e-64
Identities = 147/367 (40%), Positives = 207/367 (56%), Gaps = 8/367 (2%)
Frame = +3
Query: 12 VGLVAPDRRMLQLSLSWLGLGPVSASPWLLLQLVGATWLLSRILSWIYNFYDNCCRLRCF 191
V ++P R + +S GL V + L+L L+ A L R W+ L F
Sbjct: 3 VSALSPSRALGGVS----GLLQVVSLLGLVLLLIKAAQLYLR-RQWLLK------ALHHF 51
Query: 192 PQPPKRNWFWGHLGLAKNNEEGMRLVEDLGHCFRDVHLW------WLGPLYPVLRLVHPN 353
P PP +WF+GH + EEG +L H + V + W+ +L + P+
Sbjct: 52 PSPPS-HWFYGHK--REFQEEG-----ELPHLLKRVEKYPRACVRWMWGTRALLLVYDPD 103
Query: 354 FVAPLLQAPATIIPKDMLFYSFLKPWLGVGLLLSAGEKWSHQRRLLTPAFHFDILKSYVK 533
++ +L PK + + F+KPW+G GLLL G+ W RR+LTPAFH+DILK YV
Sbjct: 104 YMKMVLGRSD---PKAQIIHRFVKPWIGTGLLLLEGQTWFQHRRMLTPAFHYDILKPYVG 160
Query: 534 IFNRSADIMHAKWQHLASEGHTRLDMFEHISLMTLDSLQKCVFSFDSNCQ--EKPSEYIA 707
I S +M KW+ L S+ + L++F H+SLMTLD++ KC FS + Q YI
Sbjct: 161 IMADSVRVMLDKWEELVSQD-SHLEIFGHVSLMTLDTIMKCAFSQQGSVQTDRNSQSYIQ 219
Query: 708 AISELSALVTKRNEQIFLHKDFLYYLTPEGRRFRKACRLVHDFTDAVIQERRRTLISQGS 887
AI ++S L+ R F D +Y LTPEG +AC+L H TDAVI+ER+ L +G
Sbjct: 220 AIKDVSHLIISRLRNAFHQNDLIYRLTPEGHWNHRACQLAHQHTDAVIKERKVRLQKEGE 279
Query: 888 QDFLRAKAKAKTLDFIDVLLLAKDEDGKGLSDEDIRTEADTFMFAGHDTTASGLSWVLYN 1067
+ +R++ + LDF+D+LL A+ E+G LSDED+R E DTFMF GHDTTASG+SW+LY
Sbjct: 280 LEKVRSR---RHLDFLDILLFARMENGSSLSDEDLRAEVDTFMFEGHDTTASGISWILYA 336
Query: 1068 LXKHPEY 1088
L HPE+
Sbjct: 337 LASHPEH 343
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 49,369,809
Number of extensions: 1595912
Number of successful extensions: 7511
Number of sequences better than 1.0e-05: 15
Number of HSP's gapped: 7462
Number of HSP's successfully gapped: 15
Length of query: 362
Length of database: 17,681,374
Length adjustment: 103
Effective length of query: 259
Effective length of database: 14,273,310
Effective search space: 3696787290
Effective search space used: 3696787290
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002326
(1088 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_541983.2| PREDICTED: similar to Cytochrome P450 4F6 (CYPI... 615 e-176
Alignment gi|XP_541982.2| PREDICTED: similar to Cytochrome P450 4F3 (CYPI... 545 e-155
Alignment gi|XP_541984.2| PREDICTED: similar to cytochrome P450, family 2... 417 e-117
Alignment gi|NP_001041499.1| cytochrome P450, family 4, subfamily A, poly... 244 1e-64
Alignment gi|NP_001041482.1| cytochrome P450 4A38 [Canis lupus familiaris]. 240 2e-63
Alignment gi|NP_001041490.1| cytochrome P450 4A37 [Canis lupus familiaris]. 239 4e-63
Alignment gi|XP_850244.1| PREDICTED: similar to cytochrome P450, family 4... 228 6e-60
Alignment gi|XP_860991.1| PREDICTED: similar to cytochrome P450, family 4... 213 3e-55
Alignment gi|NP_001193862.1| cytochrome P450 4X1 [Canis lupus familiaris]. 202 6e-52
Alignment gi|XP_849364.1| PREDICTED: similar to cytochrome P450, family 4... 173 2e-43
>ref|XP_541983.2| PREDICTED: similar to Cytochrome P450 4F6 (CYPIVF6) [Canis
familiaris].
Length = 540
Score = 615 bits (1587), Expect = e-176
Identities = 290/355 (81%), Positives = 319/355 (89%)
Frame = +3
Query: 24 APDRRMLQLSLSWLGLGPVSASPWLLLQLVGATWLLSRILSWIYNFYDNCCRLRCFPQPP 203
AP MLQ+SLSWLGLG ++ASPW+LL L GATWLL+R+L+W Y+FYDNCCRLRCFPQPP
Sbjct: 16 APFHVMLQVSLSWLGLGQLAASPWVLLLLAGATWLLARVLTWSYSFYDNCCRLRCFPQPP 75
Query: 204 KRNWFWGHLGLAKNNEEGMRLVEDLGHCFRDVHLWWLGPLYPVLRLVHPNFVAPLLQAPA 383
KRNWFWGHLGL K+NEEG+R++EDLGH FRDVHLWW+GP YPVLRLVHP FVAPLLQAPA
Sbjct: 76 KRNWFWGHLGLVKSNEEGLRMIEDLGHYFRDVHLWWIGPFYPVLRLVHPKFVAPLLQAPA 135
Query: 384 TIIPKDMLFYSFLKPWLGVGLLLSAGEKWSHQRRLLTPAFHFDILKSYVKIFNRSADIMH 563
TI+PKDM FY+FLKPWLG GLLLSAG+KWSH RRLLTPAFHF+ILKSYVKIFNRSADIMH
Sbjct: 136 TIVPKDMFFYNFLKPWLGDGLLLSAGDKWSHHRRLLTPAFHFEILKSYVKIFNRSADIMH 195
Query: 564 AKWQHLASEGHTRLDMFEHISLMTLDSLQKCVFSFDSNCQEKPSEYIAAISELSALVTKR 743
AKW+ L SEG T LDMFEHISLMTLDSLQKCVFSFDSNCQE PSEYIAAI ELSALV KR
Sbjct: 196 AKWKRLVSEGSTHLDMFEHISLMTLDSLQKCVFSFDSNCQESPSEYIAAILELSALVVKR 255
Query: 744 NEQIFLHKDFLYYLTPEGRRFRKACRLVHDFTDAVIQERRRTLISQGSQDFLRAKAKAKT 923
NEQ+ L+ DFLY L+P+GRRFR+AC LVH+FTDA+IQERR TLIS+GS DFL K+KT
Sbjct: 256 NEQVLLYLDFLYNLSPDGRRFRRACELVHNFTDAIIQERRHTLISRGSCDFL----KSKT 311
Query: 924 LDFIDVLLLAKDEDGKGLSDEDIRTEADTFMFAGHDTTASGLSWVLYNLXKHPEY 1088
+DFIDVLLLAKDE GK LSDEDIR EADTFMF GHDTTASGLSWVL+NL KHPEY
Sbjct: 312 MDFIDVLLLAKDEAGKQLSDEDIRAEADTFMFEGHDTTASGLSWVLFNLAKHPEY 366
>ref|XP_541982.2| PREDICTED: similar to Cytochrome P450 4F3 (CYPIVF3) (Leukotriene-B(4)
omega-hydroxylase) (Leukotriene-B(4) 20-monooxygenase)
(Cytochrome P450-LTB-omega) [Canis familiaris].
Length = 465
Score = 545 bits (1405), Expect = e-155
Identities = 259/350 (74%), Positives = 300/350 (85%)
Frame = +3
Query: 39 MLQLSLSWLGLGPVSASPWLLLQLVGATWLLSRILSWIYNFYDNCCRLRCFPQPPKRNWF 218
MLQLSLSWLGLG ++ASPW+LL LVGATWLL+R+L+W Y+FYD RL+CFPQPPKRNWF
Sbjct: 1 MLQLSLSWLGLGQLAASPWVLLLLVGATWLLTRVLAWSYSFYDIRRRLQCFPQPPKRNWF 60
Query: 219 WGHLGLAKNNEEGMRLVEDLGHCFRDVHLWWLGPLYPVLRLVHPNFVAPLLQAPATIIPK 398
WGH+GL +++EEG+ ++L + DV WW+GP + V+R+ HP ++ P+L + A I PK
Sbjct: 61 WGHVGLIQSSEEGLLYTQELASTYGDVCCWWVGPWHAVIRIFHPTYIKPVLFSSAAIAPK 120
Query: 399 DMLFYSFLKPWLGVGLLLSAGEKWSHQRRLLTPAFHFDILKSYVKIFNRSADIMHAKWQH 578
DM+FYS LKPWLG GLLLSAG+KWS RR+LTPAFHF+ILK YVKIFN S ++MHAKW+
Sbjct: 121 DMVFYSLLKPWLGDGLLLSAGDKWSSHRRMLTPAFHFNILKPYVKIFNYSTNVMHAKWKR 180
Query: 579 LASEGHTRLDMFEHISLMTLDSLQKCVFSFDSNCQEKPSEYIAAISELSALVTKRNEQIF 758
L SEG T LDMFEHISLMTLDSLQKCVFSFDSNCQEKPSEYIAAI ELSALV KR++QI
Sbjct: 181 LVSEGSTHLDMFEHISLMTLDSLQKCVFSFDSNCQEKPSEYIAAILELSALVAKRHQQI- 239
Query: 759 LHKDFLYYLTPEGRRFRKACRLVHDFTDAVIQERRRTLISQGSQDFLRAKAKAKTLDFID 938
LH DFLYYLTP+G+RFR+ACRLVH+FTDAVIQERRRTL QG DFL KAK+KTLDFID
Sbjct: 240 LHMDFLYYLTPDGQRFRRACRLVHNFTDAVIQERRRTLPVQGVDDFLMTKAKSKTLDFID 299
Query: 939 VLLLAKDEDGKGLSDEDIRTEADTFMFAGHDTTASGLSWVLYNLXKHPEY 1088
VLLL+KDEDGK LSD+DIR EADTFMF GHDTTASGLSWVL+NL KHPEY
Sbjct: 300 VLLLSKDEDGKQLSDKDIRAEADTFMFEGHDTTASGLSWVLFNLAKHPEY 349
>ref|XP_541984.2| PREDICTED: similar to cytochrome P450, family 2, subfamily E,
polypeptide 2 homolog [Canis familiaris].
Length = 531
Score = 417 bits (1072), Expect = e-117
Identities = 208/332 (62%), Positives = 253/332 (76%), Gaps = 1/332 (0%)
Frame = +3
Query: 96 LLLQLVGATW-LLSRILSWIYNFYDNCCRLRCFPQPPKRNWFWGHLGLAKNNEEGMRLVE 272
LLL L+ ++ LL + L + + FY C RL CFPQPP+RNW GHLG+ NE G++ +
Sbjct: 27 LLLSLLFFSFRLLMQFLRFCWRFYITCRRLSCFPQPPRRNWLLGHLGMYLPNETGLQDEK 86
Query: 273 DLGHCFRDVHLWWLGPLYPVLRLVHPNFVAPLLQAPATIIPKDMLFYSFLKPWLGVGLLL 452
+ V L W+GP+ P+L LVHP+++ PL+ A A I PKD LFY FLKPWLG GLLL
Sbjct: 87 KVLDNMHHVILVWIGPVLPLLVLVHPDYIKPLVGASAAIAPKDDLFYGFLKPWLGDGLLL 146
Query: 453 SAGEKWSHQRRLLTPAFHFDILKSYVKIFNRSADIMHAKWQHLASEGHTRLDMFEHISLM 632
S G+KWS RRLLTPAFHFDILK Y+KIFN+ DIMH KW+ LA LDMFEH+SLM
Sbjct: 147 SKGDKWSRHRRLLTPAFHFDILKPYMKIFNQCTDIMHGKWRRLAQGSVISLDMFEHVSLM 206
Query: 633 TLDSLQKCVFSFDSNCQEKPSEYIAAISELSALVTKRNEQIFLHKDFLYYLTPEGRRFRK 812
TLDSLQKCVFS++SNCQEK S+YI+AI ELSALV +R ++ H DF+YYLT +GRRFR+
Sbjct: 207 TLDSLQKCVFSYNSNCQEKMSDYISAIIELSALVVRRQYRLHHHIDFIYYLTADGRRFRQ 266
Query: 813 ACRLVHDFTDAVIQERRRTLISQGSQDFLRAKAKAKTLDFIDVLLLAKDEDGKGLSDEDI 992
AC VH FT VIQERR+ L QG++ +L+ K + KTLDFIDVLLLA+DEDG+ LSDEDI
Sbjct: 267 ACDTVHRFTTEVIQERRQALRQQGAETWLKGK-QGKTLDFIDVLLLARDEDGRELSDEDI 325
Query: 993 RTEADTFMFAGHDTTASGLSWVLYNLXKHPEY 1088
R EADTFMF GHDTT+SGLSWVL+NL K+PEY
Sbjct: 326 RAEADTFMFEGHDTTSSGLSWVLFNLAKYPEY 357
>ref|NP_001041499.1| cytochrome P450, family 4, subfamily A, polypeptide 11 [Canis lupus
familiaris].
Length = 510
Score = 244 bits (622), Expect = 1e-64
Identities = 134/305 (43%), Positives = 183/305 (60%), Gaps = 5/305 (1%)
Frame = +3
Query: 189 FPQPPKRNWFWGHLGLAKNNEEGMRL---VEDLGHCFRDVHLWWLGPLYPVLRLVHPNFV 359
FP PP +W +GH + +E L +ED F W+ + + P+++
Sbjct: 51 FPSPPS-HWLFGHKRELQKGDELQLLLKWIEDFPCAFSR----WIWGTEAEIMIYDPDYM 105
Query: 360 APLLQAPATIIPKDMLFYSFLKPWLGVGLLLSAGEKWSHQRRLLTPAFHFDILKSYVKIF 539
+L PK Y + PW+G GLLL GE WS RR+LTPAFH+DILK YV++
Sbjct: 106 KLILGRSD---PKPDGSYKLMAPWIGYGLLLLNGETWSQHRRMLTPAFHYDILKPYVRLM 162
Query: 540 NRSADIMHAKWQHLASEGHTRLDMFEHISLMTLDSLQKCVFSFDSNCQ--EKPSEYIAAI 713
S +M KW+ L S+ ++ L++F+H+SLMTLD++ KC FS+ N Q YI AI
Sbjct: 163 ADSVQVMLDKWEELLSQ-NSHLEIFDHVSLMTLDTIMKCAFSYQGNHQADRNSQAYIQAI 221
Query: 714 SELSALVTKRNEQIFLHKDFLYYLTPEGRRFRKACRLVHDFTDAVIQERRRTLISQGSQD 893
+L+ LV R +F KD Y LT EGRR KAC+L H TD VI+ R+ L +G +
Sbjct: 222 RDLNNLVFARMRNVFYQKDIFYGLTSEGRRNHKACQLAHQHTDRVIKLRKAQLQDKGELE 281
Query: 894 FLRAKAKAKTLDFIDVLLLAKDEDGKGLSDEDIRTEADTFMFAGHDTTASGLSWVLYNLX 1073
+R K + LDF+D+LL AK E+G+GLSD+D+R E DTFMF GHDTTASG+SW+LY L
Sbjct: 282 KVRNK---RHLDFLDILLFAKVENGRGLSDKDLRAEVDTFMFEGHDTTASGISWILYALA 338
Query: 1074 KHPEY 1088
HPE+
Sbjct: 339 THPEH 343
>ref|NP_001041482.1| cytochrome P450 4A38 [Canis lupus familiaris].
Length = 510
Score = 240 bits (613), Expect = 2e-63
Identities = 136/329 (41%), Positives = 194/329 (58%), Gaps = 2/329 (0%)
Frame = +3
Query: 108 LVGATWLLSRILSWIYNFYDNCCRLRCFPQPPKRNWFWGHLGLAKNNEEGMRLVEDLGHC 287
L+G LL + + ++ ++ FP PP +WF+GH + E ++ ++
Sbjct: 24 LLGLALLLLKAAQFYWHRQWLLKAIQQFPSPPS-HWFFGHRQEFQKGRE-LQELKKRTEK 81
Query: 288 FRDVHLWWLGPLYPVLRLVHPNFVAPLLQAPATIIPKDMLFYSFLKPWLGVGLLLSAGEK 467
+ WL L + P+++ +L PK Y + PW+G GLLL GE
Sbjct: 82 YPCASPRWLWGSRVSLVVYDPDYMRMILGRSD---PKSDGSYRLMAPWIGYGLLLLNGEI 138
Query: 468 WSHQRRLLTPAFHFDILKSYVKIFNRSADIMHAKWQHLASEGHTRLDMFEHISLMTLDSL 647
W RR+LTPAFH+DILK YV++ S +M KW+ L ++ ++ L++FEH+SLMTLD++
Sbjct: 139 WFQHRRMLTPAFHYDILKPYVRLMADSVQVMLDKWEELLTQ-NSHLEIFEHVSLMTLDTI 197
Query: 648 QKCVFSFDSNCQ--EKPSEYIAAISELSALVTKRNEQIFLHKDFLYYLTPEGRRFRKACR 821
KC FS+ N Q YI AI +L+ LV R +F KD Y LT EGRR KAC+
Sbjct: 198 MKCAFSYQGNHQADRNSQAYIQAIRDLNNLVFARVRNVFYQKDIFYGLTSEGRRNHKACQ 257
Query: 822 LVHDFTDAVIQERRRTLISQGSQDFLRAKAKAKTLDFIDVLLLAKDEDGKGLSDEDIRTE 1001
L H+ TD VI+ R+ L +G + +R K + LDF+D+LL AK E+G+GLSD+D+R E
Sbjct: 258 LAHEHTDRVIKLRKAQLQDEGELEKIRNK---RHLDFLDILLFAKMENGRGLSDKDLRAE 314
Query: 1002 ADTFMFAGHDTTASGLSWVLYNLXKHPEY 1088
DTFMF GHDTTASG+SW+LY L HPE+
Sbjct: 315 VDTFMFEGHDTTASGISWILYALATHPEH 343
>ref|NP_001041490.1| cytochrome P450 4A37 [Canis lupus familiaris].
Length = 510
Score = 239 bits (609), Expect = 4e-63
Identities = 131/302 (43%), Positives = 184/302 (60%), Gaps = 2/302 (0%)
Frame = +3
Query: 189 FPQPPKRNWFWGHLGLAKNNEEGMRLVEDLGHCFRDVHLWWLGPLYPVLRLVHPNFVAPL 368
FP PP +WF+GH + +E +++ + + WL L + P+++ +
Sbjct: 51 FPSPPS-HWFFGHKQEFQTGQE-LQVFQKWTEKYPCASPRWLWGSRVSLVVYDPDYMKMI 108
Query: 369 LQAPATIIPKDMLFYSFLKPWLGVGLLLSAGEKWSHQRRLLTPAFHFDILKSYVKIFNRS 548
L PK Y+F+ PW+G GLLL GE W RR+LTPAFH+DILK YV++ S
Sbjct: 109 LGRSD---PKAGGSYTFITPWIGYGLLLLHGEAWFQHRRMLTPAFHYDILKPYVRLMADS 165
Query: 549 ADIMHAKWQHLASEGHTRLDMFEHISLMTLDSLQKCVFSFDSNCQ--EKPSEYIAAISEL 722
+M KW+ L ++ ++ L++FEH+SLMTLD++ KC FS+ N Q YI AI ++
Sbjct: 166 VQVMLDKWEELLTQ-NSHLEIFEHVSLMTLDTIMKCAFSYQGNHQADRNSQAYIQAIRDM 224
Query: 723 SALVTKRNEQIFLHKDFLYYLTPEGRRFRKACRLVHDFTDAVIQERRRTLISQGSQDFLR 902
+ LV R +F KD Y LT EGRR KA ++ H TD VI+ R+ L +G + +R
Sbjct: 225 NNLVFARVRNVFYQKDIFYGLTSEGRRNHKARQIAHQHTDRVIKLRKAQLQDEGELEKVR 284
Query: 903 AKAKAKTLDFIDVLLLAKDEDGKGLSDEDIRTEADTFMFAGHDTTASGLSWVLYNLXKHP 1082
K + LDF+D+LL AK E+GKGLSD+D+R E DTFMF GHDTTASG+SW+LY L HP
Sbjct: 285 NK---RHLDFLDILLFAKMENGKGLSDKDLRAEVDTFMFEGHDTTASGISWILYALATHP 341
Query: 1083 EY 1088
E+
Sbjct: 342 EH 343
>ref|XP_850244.1| PREDICTED: similar to cytochrome P450, family 4, subfamily B,
polypeptide 1 isoform 2 [Canis familiaris].
Length = 511
Score = 228 bits (582), Expect = 6e-60
Identities = 123/301 (40%), Positives = 173/301 (57%), Gaps = 1/301 (0%)
Frame = +3
Query: 189 FPQPPKRNWFWGHLGLAKNNEEGMRLVEDLGHCFRDVHLWWLGPLYPVLRLVHPNFVAPL 368
FP PP +W +GH + ++V H + H WLGP L + P++ +
Sbjct: 46 FPGPPT-HWLFGHAQEIQQTGSLDKVVT-WAHQYDYAHPLWLGPFLGFLNIYEPDYAKAV 103
Query: 369 LQAPATIIPKDMLFYSFLKPWLGVGLLLSAGEKWSHQRRLLTPAFHFDILKSYVKIFNRS 548
PK Y F W+G GLL+ G KW R+LLTP FH+D+LKSYV +F S
Sbjct: 104 YSRGD---PKAADVYDFFLQWIGKGLLVLQGPKWYQHRKLLTPGFHYDVLKSYVAVFTNS 160
Query: 549 ADIMHAKWQHLASEGHTRLDMFEHISLMTLDSLQKCVFSF-DSNCQEKPSEYIAAISELS 725
M KW+ A E + D+F + M LDSL KC F DS+ + S Y +A+ +L+
Sbjct: 161 THAMLDKWEEKAREDKS-FDIFCDVGYMALDSLMKCTFGKGDSSLGHRDSSYYSAVRDLT 219
Query: 726 ALVTKRNEQIFLHKDFLYYLTPEGRRFRKACRLVHDFTDAVIQERRRTLISQGSQDFLRA 905
L+ +R E H DF+Y+LTP GRRF +AC+ HD TD VI+ER+ L + Q+ ++
Sbjct: 220 LLMQQRIESFQYHNDFIYWLTPHGRRFLRACQAAHDHTDQVIRERKAALQDEKEQEKIQN 279
Query: 906 KAKAKTLDFIDVLLLAKDEDGKGLSDEDIRTEADTFMFAGHDTTASGLSWVLYNLXKHPE 1085
+ + LDF+D+LL A+DE+G LSD D+R E DTFMF GHDTT SG+SW LY + +P+
Sbjct: 280 R---RHLDFLDILLGARDENGIKLSDADLRAEVDTFMFEGHDTTTSGISWFLYCMALYPQ 336
Query: 1086 Y 1088
+
Sbjct: 337 H 337
>ref|XP_860991.1| PREDICTED: similar to cytochrome P450, family 4, subfamily B,
polypeptide 1 isoform 3 [Canis familiaris].
Length = 496
Score = 213 bits (542), Expect = 3e-55
Identities = 118/301 (39%), Positives = 167/301 (55%), Gaps = 1/301 (0%)
Frame = +3
Query: 189 FPQPPKRNWFWGHLGLAKNNEEGMRLVEDLGHCFRDVHLWWLGPLYPVLRLVHPNFVAPL 368
FP PP +W +GH + ++V H + H WLGP L + P++ +
Sbjct: 46 FPGPPT-HWLFGHAQEIQQTGSLDKVVT-WAHQYDYAHPLWLGPFLGFLNIYEPDYAKAV 103
Query: 369 LQAPATIIPKDMLFYSFLKPWLGVGLLLSAGEKWSHQRRLLTPAFHFDILKSYVKIFNRS 548
G GLL+ G KW R+LLTP FH+D+LKSYV +F S
Sbjct: 104 YSRG------------------GKGLLVLQGPKWYQHRKLLTPGFHYDVLKSYVAVFTNS 145
Query: 549 ADIMHAKWQHLASEGHTRLDMFEHISLMTLDSLQKCVFSF-DSNCQEKPSEYIAAISELS 725
M KW+ A E + D+F + M LDSL KC F DS+ + S Y +A+ +L+
Sbjct: 146 THAMLDKWEEKAREDKS-FDIFCDVGYMALDSLMKCTFGKGDSSLGHRDSSYYSAVRDLT 204
Query: 726 ALVTKRNEQIFLHKDFLYYLTPEGRRFRKACRLVHDFTDAVIQERRRTLISQGSQDFLRA 905
L+ +R E H DF+Y+LTP GRRF +AC+ HD TD VI+ER+ L + Q+ ++
Sbjct: 205 LLMQQRIESFQYHNDFIYWLTPHGRRFLRACQAAHDHTDQVIRERKAALQDEKEQEKIQN 264
Query: 906 KAKAKTLDFIDVLLLAKDEDGKGLSDEDIRTEADTFMFAGHDTTASGLSWVLYNLXKHPE 1085
+ + LDF+D+LL A+DE+G LSD D+R E DTFMF GHDTT SG+SW LY + +P+
Sbjct: 265 R---RHLDFLDILLGARDENGIKLSDADLRAEVDTFMFEGHDTTTSGISWFLYCMALYPQ 321
Query: 1086 Y 1088
+
Sbjct: 322 H 322
>ref|NP_001193862.1| cytochrome P450 4X1 [Canis lupus familiaris].
Length = 507
Score = 202 bits (513), Expect = 6e-52
Identities = 107/302 (35%), Positives = 169/302 (55%), Gaps = 2/302 (0%)
Frame = +3
Query: 189 FPQPPKRNWFWGHLGLAKNNEEGMRLVEDLGHCFRDVHLWWLGPLYPVLRLVHPNFVAPL 368
FP PP +WF+GH L ++ + + +E+L + +W+GP + P++
Sbjct: 46 FPAPPT-HWFYGHQKLLQDGK--IEKLEELVEKYPCAFPYWVGPFQAFFYIYDPDYAKTF 102
Query: 369 LQAPATIIPKDMLFYSFLKPWLGVGLLLSAGEKWSHQRRLLTPAFHFDILKSYVKIFNRS 548
L PK Y FL P LG GL+ G KW R LLTP F+ +ILKSY+K+ S
Sbjct: 103 L---GRTDPKSKYLYKFLIPCLGNGLVNLEGSKWFQHRCLLTPGFNVNILKSYIKVMAHS 159
Query: 549 ADIMHAKWQHLASEGHTRLDMFEHISLMTLDSLQKCVFSFDSNCQEKPSE--YIAAISEL 722
+ M KW+ + T +++FEHI+LMTLD L KC FS ++NCQ + Y+ E
Sbjct: 160 VNTMLGKWEKICGTQDTVVEVFEHINLMTLDVLMKCAFSQETNCQISSNHDLYVKTTFEA 219
Query: 723 SALVTKRNEQIFLHKDFLYYLTPEGRRFRKACRLVHDFTDAVIQERRRTLISQGSQDFLR 902
S + R H D ++ +P+G R ++ +++H +T+ VIQ+R++ L + +
Sbjct: 220 SKINFYRLYSFLHHHDIIFKFSPQGHRLQELVKILHQYTEKVIQDRKKLLKDEKKHGNTQ 279
Query: 903 AKAKAKTLDFIDVLLLAKDEDGKGLSDEDIRTEADTFMFAGHDTTASGLSWVLYNLXKHP 1082
K K D++D++L A+ E+G SD D+R+E +TF+ AGHDT A +SW+LY+L +P
Sbjct: 280 ---KRKDQDYLDIILSAQAENGNSFSDTDLRSEVNTFILAGHDTMAGSISWLLYHLALNP 336
Query: 1083 EY 1088
E+
Sbjct: 337 EH 338
>ref|XP_849364.1| PREDICTED: similar to cytochrome P450, family 4, subfamily v,
polypeptide 2 [Canis familiaris].
Length = 575
Score = 173 bits (439), Expect = 2e-43
Identities = 119/361 (32%), Positives = 183/361 (50%), Gaps = 14/361 (3%)
Frame = +3
Query: 45 QLSLSWLGLGPVSASPWLLLQLVGATWLLSRILSWIYNFYDNCCRLRCFPQPPKRNWFWG 224
Q L W LGP S +G L+ R L + ++ C ++R FP P
Sbjct: 57 QKLLLWGALGPPS---------LGGPPLVVRFLQMLASYAQKCHQMRAFPSLPGAYPLVE 107
Query: 225 HL------GLAKNNEEGMRLV---EDLGHCFRDVHLWWLGPLYPVLRLVHPNFVAPLLQA 377
H G + E +++ E+ H + WLGP+ P++ + V +L +
Sbjct: 108 HSLLINPPGKVRGREFFQQVILYSEESRHL--PLLKLWLGPI-PIVAIYSAENVEVILTS 164
Query: 378 PATIIPKDMLFYSFLKPWLGVGLLLSAGEKWSHQRRLLTPAFHFDILKSYVKIFNRSADI 557
I Y FL+PWLG+GLL S G KW +R++LTP FHF IL+ ++ + N A+I
Sbjct: 165 SRQI--DKSYVYKFLEPWLGLGLLTSTGNKWRSRRKMLTPTFHFTILEDFLDVMNEHANI 222
Query: 558 MHAKWQ-HLASEGHTRLDMFEHISLMTLDSLQKCVFSFDSNCQE-KPSEYIAAISELSAL 731
+ K + H+ E + F +I+L LD + + + Q + SEY+ AI +S
Sbjct: 223 LVNKLEKHVNQEA---FNCFFYITLCALDIICETAMGKNIGAQNNEDSEYVRAIYRMSDT 279
Query: 732 VTKRNEQIFLHKDFLYYLTPEGRRFRKACRLVHDFTDAVIQERRRTLI---SQGSQDFLR 902
+ +R + +L DFL+ + EGR ++ ++H+FT+ VI ER L GS D
Sbjct: 280 IHRRMKMPWLWLDFLFLMFKEGREHKRNLEILHNFTNNVITERASELKRDEEHGSADKDC 339
Query: 903 AKAKAKTLDFIDVLLLAKDEDGKGLSDEDIRTEADTFMFAGHDTTASGLSWVLYNLXKHP 1082
+ +K K F+D+LL D++G L ED+R E DTFMF GHDTTA+ ++W LY L +P
Sbjct: 340 SPSKNKRRAFLDLLLNVTDDEGNKLRHEDVREEVDTFMFEGHDTTAAAINWSLYLLGSYP 399
Query: 1083 E 1085
E
Sbjct: 400 E 400
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 51,254,800
Number of extensions: 1625952
Number of successful extensions: 7284
Number of sequences better than 1.0e-05: 16
Number of HSP's gapped: 7228
Number of HSP's successfully gapped: 17
Length of query: 362
Length of database: 18,874,504
Length adjustment: 104
Effective length of query: 258
Effective length of database: 15,407,560
Effective search space: 3975150480
Effective search space used: 3975150480
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002326
(1088 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_000887.2| leukotriene-B(4) omega-hydroxylase 2 isoform a ... 563 e-160
Alignment gi|NP_001186138.1| leukotriene-B(4) omega-hydroxylase 2 isoform... 555 e-158
Alignment gi|NP_001186137.1| leukotriene-B(4) omega-hydroxylase 2 isoform... 555 e-158
Alignment gi|NP_001122404.1| cytochrome P450 4F11 [Homo sapiens]. 545 e-155
Alignment gi|NP_067010.3| cytochrome P450 4F11 [Homo sapiens]. 545 e-155
Alignment gi|NP_001073.3| leukotriene-B(4) omega-hydroxylase 1 [Homo sapi... 542 e-154
Alignment gi|NP_009184.1| cytochrome P450 4F8 [Homo sapiens]. 516 e-146
Alignment gi|NP_076433.3| cytochrome P450 4F12 [Homo sapiens]. 511 e-145
Alignment gi|NP_775754.2| cytochrome P450 4F22 [Homo sapiens]. 426 e-119
Alignment gi|NP_000769.2| cytochrome P450 4A11 [Homo sapiens]. 228 1e-59
>ref|NP_000887.2| leukotriene-B(4) omega-hydroxylase 2 isoform a [Homo sapiens].
Length = 520
Score = 563 bits (1451), Expect = e-160
Identities = 269/350 (76%), Positives = 304/350 (86%)
Frame = +3
Query: 39 MLQLSLSWLGLGPVSASPWLLLQLVGATWLLSRILSWIYNFYDNCCRLRCFPQPPKRNWF 218
M QLSLS LGL P++ASPWLLL LVGA+WLL+RIL+W Y FYDNCCRLRCFPQPPKRNWF
Sbjct: 1 MPQLSLSSLGLWPMAASPWLLLLLVGASWLLARILAWTYTFYDNCCRLRCFPQPPKRNWF 60
Query: 219 WGHLGLAKNNEEGMRLVEDLGHCFRDVHLWWLGPLYPVLRLVHPNFVAPLLQAPATIIPK 398
GHLGL ++EEG+ + L F D+ WW+GP + ++R+ HP ++ P+L APA I+PK
Sbjct: 61 LGHLGLIHSSEEGLLYTQSLACTFGDMCCWWVGPWHAIVRIFHPTYIKPVLFAPAAIVPK 120
Query: 399 DMLFYSFLKPWLGVGLLLSAGEKWSHQRRLLTPAFHFDILKSYVKIFNRSADIMHAKWQH 578
D +FYSFLKPWLG GLLLSAGEKWS RR+LTPAFHF+ILK Y+KIFN S +IMHAKWQ
Sbjct: 121 DKVFYSFLKPWLGDGLLLSAGEKWSRHRRMLTPAFHFNILKPYMKIFNESVNIMHAKWQL 180
Query: 579 LASEGHTRLDMFEHISLMTLDSLQKCVFSFDSNCQEKPSEYIAAISELSALVTKRNEQIF 758
LASEG RLDMFEHISLMTLDSLQKCVFSFDS+CQEKPSEYIAAI ELSALVTKR++QI
Sbjct: 181 LASEGSARLDMFEHISLMTLDSLQKCVFSFDSHCQEKPSEYIAAILELSALVTKRHQQIL 240
Query: 759 LHKDFLYYLTPEGRRFRKACRLVHDFTDAVIQERRRTLISQGSQDFLRAKAKAKTLDFID 938
L+ DFLYYLTP+G+RFR+ACRLVHDFTDAVIQERRRTL SQG DFL+AKAK+KTLDFID
Sbjct: 241 LYIDFLYYLTPDGQRFRRACRLVHDFTDAVIQERRRTLPSQGVDDFLQAKAKSKTLDFID 300
Query: 939 VLLLAKDEDGKGLSDEDIRTEADTFMFAGHDTTASGLSWVLYNLXKHPEY 1088
VLLL+KDEDGK LSDEDIR EADTFMF GHDTTASGLSWVLY+L KHPEY
Sbjct: 301 VLLLSKDEDGKKLSDEDIRAEADTFMFEGHDTTASGLSWVLYHLAKHPEY 350
>ref|NP_001186138.1| leukotriene-B(4) omega-hydroxylase 2 isoform b [Homo sapiens].
Length = 520
Score = 555 bits (1429), Expect = e-158
Identities = 267/350 (76%), Positives = 300/350 (85%)
Frame = +3
Query: 39 MLQLSLSWLGLGPVSASPWLLLQLVGATWLLSRILSWIYNFYDNCCRLRCFPQPPKRNWF 218
M QLSLS LGL P++ASPWLLL LVGA+WLL+RIL+W Y FYDNCCRLRCFPQPPKRNWF
Sbjct: 1 MPQLSLSSLGLWPMAASPWLLLLLVGASWLLARILAWTYTFYDNCCRLRCFPQPPKRNWF 60
Query: 219 WGHLGLAKNNEEGMRLVEDLGHCFRDVHLWWLGPLYPVLRLVHPNFVAPLLQAPATIIPK 398
GHLGL E+GMR++ L + W+GP++PV+R HPN + ++ A A I+PK
Sbjct: 61 LGHLGLVTPTEQGMRVLTQLVATYPQGFKVWMGPIFPVIRFCHPNIIRSVINASAAIVPK 120
Query: 399 DMLFYSFLKPWLGVGLLLSAGEKWSHQRRLLTPAFHFDILKSYVKIFNRSADIMHAKWQH 578
D +FYSFLKPWLG GLLLSAGEKWS RR+LTPAFHF+ILK Y+KIFN S +IMHAKWQ
Sbjct: 121 DKVFYSFLKPWLGDGLLLSAGEKWSRHRRMLTPAFHFNILKPYMKIFNESVNIMHAKWQL 180
Query: 579 LASEGHTRLDMFEHISLMTLDSLQKCVFSFDSNCQEKPSEYIAAISELSALVTKRNEQIF 758
LASEG RLDMFEHISLMTLDSLQKCVFSFDS+CQEKPSEYIAAI ELSALVTKR++QI
Sbjct: 181 LASEGSARLDMFEHISLMTLDSLQKCVFSFDSHCQEKPSEYIAAILELSALVTKRHQQIL 240
Query: 759 LHKDFLYYLTPEGRRFRKACRLVHDFTDAVIQERRRTLISQGSQDFLRAKAKAKTLDFID 938
L+ DFLYYLTP+G+RFR+ACRLVHDFTDAVIQERRRTL SQG DFL+AKAK+KTLDFID
Sbjct: 241 LYIDFLYYLTPDGQRFRRACRLVHDFTDAVIQERRRTLPSQGVDDFLQAKAKSKTLDFID 300
Query: 939 VLLLAKDEDGKGLSDEDIRTEADTFMFAGHDTTASGLSWVLYNLXKHPEY 1088
VLLL+KDEDGK LSDEDIR EADTFMF GHDTTASGLSWVLY+L KHPEY
Sbjct: 301 VLLLSKDEDGKKLSDEDIRAEADTFMFEGHDTTASGLSWVLYHLAKHPEY 350
>ref|NP_001186137.1| leukotriene-B(4) omega-hydroxylase 2 isoform b [Homo sapiens].
Length = 520
Score = 555 bits (1429), Expect = e-158
Identities = 267/350 (76%), Positives = 300/350 (85%)
Frame = +3
Query: 39 MLQLSLSWLGLGPVSASPWLLLQLVGATWLLSRILSWIYNFYDNCCRLRCFPQPPKRNWF 218
M QLSLS LGL P++ASPWLLL LVGA+WLL+RIL+W Y FYDNCCRLRCFPQPPKRNWF
Sbjct: 1 MPQLSLSSLGLWPMAASPWLLLLLVGASWLLARILAWTYTFYDNCCRLRCFPQPPKRNWF 60
Query: 219 WGHLGLAKNNEEGMRLVEDLGHCFRDVHLWWLGPLYPVLRLVHPNFVAPLLQAPATIIPK 398
GHLGL E+GMR++ L + W+GP++PV+R HPN + ++ A A I+PK
Sbjct: 61 LGHLGLVTPTEQGMRVLTQLVATYPQGFKVWMGPIFPVIRFCHPNIIRSVINASAAIVPK 120
Query: 399 DMLFYSFLKPWLGVGLLLSAGEKWSHQRRLLTPAFHFDILKSYVKIFNRSADIMHAKWQH 578
D +FYSFLKPWLG GLLLSAGEKWS RR+LTPAFHF+ILK Y+KIFN S +IMHAKWQ
Sbjct: 121 DKVFYSFLKPWLGDGLLLSAGEKWSRHRRMLTPAFHFNILKPYMKIFNESVNIMHAKWQL 180
Query: 579 LASEGHTRLDMFEHISLMTLDSLQKCVFSFDSNCQEKPSEYIAAISELSALVTKRNEQIF 758
LASEG RLDMFEHISLMTLDSLQKCVFSFDS+CQEKPSEYIAAI ELSALVTKR++QI
Sbjct: 181 LASEGSARLDMFEHISLMTLDSLQKCVFSFDSHCQEKPSEYIAAILELSALVTKRHQQIL 240
Query: 759 LHKDFLYYLTPEGRRFRKACRLVHDFTDAVIQERRRTLISQGSQDFLRAKAKAKTLDFID 938
L+ DFLYYLTP+G+RFR+ACRLVHDFTDAVIQERRRTL SQG DFL+AKAK+KTLDFID
Sbjct: 241 LYIDFLYYLTPDGQRFRRACRLVHDFTDAVIQERRRTLPSQGVDDFLQAKAKSKTLDFID 300
Query: 939 VLLLAKDEDGKGLSDEDIRTEADTFMFAGHDTTASGLSWVLYNLXKHPEY 1088
VLLL+KDEDGK LSDEDIR EADTFMF GHDTTASGLSWVLY+L KHPEY
Sbjct: 301 VLLLSKDEDGKKLSDEDIRAEADTFMFEGHDTTASGLSWVLYHLAKHPEY 350
>ref|NP_001122404.1| cytochrome P450 4F11 [Homo sapiens].
Length = 524
Score = 545 bits (1403), Expect = e-155
Identities = 258/350 (73%), Positives = 291/350 (83%)
Frame = +3
Query: 39 MLQLSLSWLGLGPVSASPWLLLQLVGATWLLSRILSWIYNFYDNCCRLRCFPQPPKRNWF 218
M QLSLSWLGLGPV+ASPWLLL LVG +WLL+R+L+W Y FYDNC RL+CFPQPPK+NWF
Sbjct: 1 MPQLSLSWLGLGPVAASPWLLLLLVGGSWLLARVLAWTYTFYDNCRRLQCFPQPPKQNWF 60
Query: 219 WGHLGLAKNNEEGMRLVEDLGHCFRDVHLWWLGPLYPVLRLVHPNFVAPLLQAPATIIPK 398
WGH GL EEGM+ + L + WLGP +P+L L HP+ + P+ A A + PK
Sbjct: 61 WGHQGLVTPTEEGMKTLTQLVTTYPQGFKLWLGPTFPLLILCHPDIIRPITSASAAVAPK 120
Query: 399 DMLFYSFLKPWLGVGLLLSAGEKWSHQRRLLTPAFHFDILKSYVKIFNRSADIMHAKWQH 578
DM+FY FLKPWLG GLLLS G+KWS RR+LTPAFHF+ILK Y+KIFN+S +IMH KWQ
Sbjct: 121 DMIFYGFLKPWLGDGLLLSGGDKWSRHRRMLTPAFHFNILKPYMKIFNKSVNIMHDKWQR 180
Query: 579 LASEGHTRLDMFEHISLMTLDSLQKCVFSFDSNCQEKPSEYIAAISELSALVTKRNEQIF 758
LASEG RLDMFEHISLMTLDSLQKCVFSF+SNCQEKPSEYIAAI ELSA V KRN+QI
Sbjct: 181 LASEGSARLDMFEHISLMTLDSLQKCVFSFESNCQEKPSEYIAAILELSAFVEKRNQQIL 240
Query: 759 LHKDFLYYLTPEGRRFRKACRLVHDFTDAVIQERRRTLISQGSQDFLRAKAKAKTLDFID 938
LH DFLYYLTP+G+RFR+AC LVHDFTDAVIQERR TL +QG DFL+ KAK+KTLDFID
Sbjct: 241 LHTDFLYYLTPDGQRFRRACHLVHDFTDAVIQERRCTLPTQGIDDFLKNKAKSKTLDFID 300
Query: 939 VLLLAKDEDGKGLSDEDIRTEADTFMFAGHDTTASGLSWVLYNLXKHPEY 1088
VLLL+KDEDGK LSDEDIR EADTFMF GHDTTASGLSWVLY+L KHPEY
Sbjct: 301 VLLLSKDEDGKELSDEDIRAEADTFMFEGHDTTASGLSWVLYHLAKHPEY 350
>ref|NP_067010.3| cytochrome P450 4F11 [Homo sapiens].
Length = 524
Score = 545 bits (1403), Expect = e-155
Identities = 258/350 (73%), Positives = 291/350 (83%)
Frame = +3
Query: 39 MLQLSLSWLGLGPVSASPWLLLQLVGATWLLSRILSWIYNFYDNCCRLRCFPQPPKRNWF 218
M QLSLSWLGLGPV+ASPWLLL LVG +WLL+R+L+W Y FYDNC RL+CFPQPPK+NWF
Sbjct: 1 MPQLSLSWLGLGPVAASPWLLLLLVGGSWLLARVLAWTYTFYDNCRRLQCFPQPPKQNWF 60
Query: 219 WGHLGLAKNNEEGMRLVEDLGHCFRDVHLWWLGPLYPVLRLVHPNFVAPLLQAPATIIPK 398
WGH GL EEGM+ + L + WLGP +P+L L HP+ + P+ A A + PK
Sbjct: 61 WGHQGLVTPTEEGMKTLTQLVTTYPQGFKLWLGPTFPLLILCHPDIIRPITSASAAVAPK 120
Query: 399 DMLFYSFLKPWLGVGLLLSAGEKWSHQRRLLTPAFHFDILKSYVKIFNRSADIMHAKWQH 578
DM+FY FLKPWLG GLLLS G+KWS RR+LTPAFHF+ILK Y+KIFN+S +IMH KWQ
Sbjct: 121 DMIFYGFLKPWLGDGLLLSGGDKWSRHRRMLTPAFHFNILKPYMKIFNKSVNIMHDKWQR 180
Query: 579 LASEGHTRLDMFEHISLMTLDSLQKCVFSFDSNCQEKPSEYIAAISELSALVTKRNEQIF 758
LASEG RLDMFEHISLMTLDSLQKCVFSF+SNCQEKPSEYIAAI ELSA V KRN+QI
Sbjct: 181 LASEGSARLDMFEHISLMTLDSLQKCVFSFESNCQEKPSEYIAAILELSAFVEKRNQQIL 240
Query: 759 LHKDFLYYLTPEGRRFRKACRLVHDFTDAVIQERRRTLISQGSQDFLRAKAKAKTLDFID 938
LH DFLYYLTP+G+RFR+AC LVHDFTDAVIQERR TL +QG DFL+ KAK+KTLDFID
Sbjct: 241 LHTDFLYYLTPDGQRFRRACHLVHDFTDAVIQERRCTLPTQGIDDFLKNKAKSKTLDFID 300
Query: 939 VLLLAKDEDGKGLSDEDIRTEADTFMFAGHDTTASGLSWVLYNLXKHPEY 1088
VLLL+KDEDGK LSDEDIR EADTFMF GHDTTASGLSWVLY+L KHPEY
Sbjct: 301 VLLLSKDEDGKELSDEDIRAEADTFMFEGHDTTASGLSWVLYHLAKHPEY 350
>ref|NP_001073.3| leukotriene-B(4) omega-hydroxylase 1 [Homo sapiens].
Length = 520
Score = 542 bits (1397), Expect = e-154
Identities = 260/350 (74%), Positives = 294/350 (84%)
Frame = +3
Query: 39 MLQLSLSWLGLGPVSASPWLLLQLVGATWLLSRILSWIYNFYDNCCRLRCFPQPPKRNWF 218
M QLSLSWLGL PV+ASPWLLL LVGA+WLL+ +L+W Y FYDNC RLRCFPQPP+RNWF
Sbjct: 1 MSQLSLSWLGLWPVAASPWLLLLLVGASWLLAHVLAWTYAFYDNCRRLRCFPQPPRRNWF 60
Query: 219 WGHLGLAKNNEEGMRLVEDLGHCFRDVHLWWLGPLYPVLRLVHPNFVAPLLQAPATIIPK 398
WGH G+ EEGMR++ L + W+GP+ P+L L HP+ + ++ A A I PK
Sbjct: 61 WGHQGMVNPTEEGMRVLTQLVATYPQGFKVWMGPISPLLSLCHPDIIRSVINASAAIAPK 120
Query: 399 DMLFYSFLKPWLGVGLLLSAGEKWSHQRRLLTPAFHFDILKSYVKIFNRSADIMHAKWQH 578
D FYSFL+PWLG GLLLSAG+KWS RR+LTPAFHF+ILK Y+KIFN S +IMHAKWQ
Sbjct: 121 DKFFYSFLEPWLGDGLLLSAGDKWSRHRRMLTPAFHFNILKPYMKIFNESVNIMHAKWQL 180
Query: 579 LASEGHTRLDMFEHISLMTLDSLQKCVFSFDSNCQEKPSEYIAAISELSALVTKRNEQIF 758
LASEG LDMFEHISLMTLDSLQKCVFSFDS+CQEKPSEYIAAI ELSALV+KR+ +I
Sbjct: 181 LASEGSACLDMFEHISLMTLDSLQKCVFSFDSHCQEKPSEYIAAILELSALVSKRHHEIL 240
Query: 759 LHKDFLYYLTPEGRRFRKACRLVHDFTDAVIQERRRTLISQGSQDFLRAKAKAKTLDFID 938
LH DFLYYLTP+G+RFR+ACRLVHDFTDAVIQERRRTL SQG DFL+AKAK+KTLDFID
Sbjct: 241 LHIDFLYYLTPDGQRFRRACRLVHDFTDAVIQERRRTLPSQGVDDFLQAKAKSKTLDFID 300
Query: 939 VLLLAKDEDGKGLSDEDIRTEADTFMFAGHDTTASGLSWVLYNLXKHPEY 1088
VLLL+KDEDGK LSDEDIR EADTFMF GHDTTASGLSWVLY+L KHPEY
Sbjct: 301 VLLLSKDEDGKKLSDEDIRAEADTFMFEGHDTTASGLSWVLYHLAKHPEY 350
>ref|NP_009184.1| cytochrome P450 4F8 [Homo sapiens].
Length = 520
Score = 516 bits (1329), Expect = e-146
Identities = 249/350 (71%), Positives = 286/350 (81%)
Frame = +3
Query: 39 MLQLSLSWLGLGPVSASPWLLLQLVGATWLLSRILSWIYNFYDNCCRLRCFPQPPKRNWF 218
M LSLSWLGL PV+ASPWLLL +VGA+WLL+RIL+W Y FY N RLRCFPQP K+NWF
Sbjct: 1 MSLLSLSWLGLRPVAASPWLLLLVVGASWLLARILAWTYAFYHNGRRLRCFPQPRKQNWF 60
Query: 219 WGHLGLAKNNEEGMRLVEDLGHCFRDVHLWWLGPLYPVLRLVHPNFVAPLLQAPATIIPK 398
GHLGL EEG+R++ L + + WLGP+ P++ L HP+ V ++ I K
Sbjct: 61 LGHLGLVTPTEEGLRVLTQLVATYPQGFVRWLGPITPIINLCHPDIVRSVINTSDAITDK 120
Query: 399 DMLFYSFLKPWLGVGLLLSAGEKWSHQRRLLTPAFHFDILKSYVKIFNRSADIMHAKWQH 578
D++FY LKPWLG GLLLS G+KW H RRLLTPAFHF+ILK Y+KIF++SA+IMHAKWQ
Sbjct: 121 DIVFYKTLKPWLGDGLLLSVGDKWRHHRRLLTPAFHFNILKPYIKIFSKSANIMHAKWQR 180
Query: 579 LASEGHTRLDMFEHISLMTLDSLQKCVFSFDSNCQEKPSEYIAAISELSALVTKRNEQIF 758
LA EG T LD+FEHISLMTLDSLQKC+FSFDSNCQEKPSEYI AI ELSALV KRN Q F
Sbjct: 181 LAMEGSTCLDVFEHISLMTLDSLQKCIFSFDSNCQEKPSEYITAIMELSALVVKRNNQFF 240
Query: 759 LHKDFLYYLTPEGRRFRKACRLVHDFTDAVIQERRRTLISQGSQDFLRAKAKAKTLDFID 938
+KDFLY+LTP GRRF +ACRLVHDFTDAVIQERRRTL SQG DFL+AKAK+KTLDFID
Sbjct: 241 RYKDFLYFLTPCGRRFHRACRLVHDFTDAVIQERRRTLTSQGVDDFLQAKAKSKTLDFID 300
Query: 939 VLLLAKDEDGKGLSDEDIRTEADTFMFAGHDTTASGLSWVLYNLXKHPEY 1088
VLLL++D++GK LSDEDIR EADTFMF GHDTTASGLSWVLYNL +HPEY
Sbjct: 301 VLLLSEDKNGKELSDEDIRAEADTFMFGGHDTTASGLSWVLYNLARHPEY 350
>ref|NP_076433.3| cytochrome P450 4F12 [Homo sapiens].
Length = 524
Score = 511 bits (1317), Expect = e-145
Identities = 244/350 (69%), Positives = 281/350 (80%)
Frame = +3
Query: 39 MLQLSLSWLGLGPVSASPWLLLQLVGATWLLSRILSWIYNFYDNCCRLRCFPQPPKRNWF 218
M LSL WLGL PV+ SPWLLL LV +WLL+RIL+W Y FY+NC RL+CFPQPPKRNWF
Sbjct: 1 MSLLSLPWLGLRPVATSPWLLLLLVVGSWLLARILAWTYAFYNNCRRLQCFPQPPKRNWF 60
Query: 219 WGHLGLAKNNEEGMRLVEDLGHCFRDVHLWWLGPLYPVLRLVHPNFVAPLLQAPATIIPK 398
WGHLGL EEG++ + + WLGP+ P + L HP+ + + A A I PK
Sbjct: 61 WGHLGLITPTEEGLKNSTQMSATYSQGFTVWLGPIIPFIVLCHPDTIRSITNASAAIAPK 120
Query: 399 DMLFYSFLKPWLGVGLLLSAGEKWSHQRRLLTPAFHFDILKSYVKIFNRSADIMHAKWQH 578
D LF FLKPWLG G+LLS G+KWS RR+LTPAFHF+ILKSY+ IFN+SA+IM KWQH
Sbjct: 121 DNLFIRFLKPWLGEGILLSGGDKWSRHRRMLTPAFHFNILKSYITIFNKSANIMLDKWQH 180
Query: 579 LASEGHTRLDMFEHISLMTLDSLQKCVFSFDSNCQEKPSEYIAAISELSALVTKRNEQIF 758
LASEG +RLDMFEHISLMTLDSLQKC+FSFDS+CQE+PSEYIA I ELSALV KR++ I
Sbjct: 181 LASEGSSRLDMFEHISLMTLDSLQKCIFSFDSHCQERPSEYIATILELSALVEKRSQHIL 240
Query: 759 LHKDFLYYLTPEGRRFRKACRLVHDFTDAVIQERRRTLISQGSQDFLRAKAKAKTLDFID 938
H DFLYYL+ +GRRF +ACRLVHDFTDAVI+ERRRTL +QG DF + KAK+KTLDFID
Sbjct: 241 QHMDFLYYLSHDGRRFHRACRLVHDFTDAVIRERRRTLPTQGIDDFFKDKAKSKTLDFID 300
Query: 939 VLLLAKDEDGKGLSDEDIRTEADTFMFAGHDTTASGLSWVLYNLXKHPEY 1088
VLLL+KDEDGK LSDEDIR EADTFMF GHDTTASGLSWVLYNL +HPEY
Sbjct: 301 VLLLSKDEDGKALSDEDIRAEADTFMFGGHDTTASGLSWVLYNLARHPEY 350
>ref|NP_775754.2| cytochrome P450 4F22 [Homo sapiens].
Length = 531
Score = 426 bits (1094), Expect = e-119
Identities = 217/353 (61%), Positives = 260/353 (73%)
Frame = +3
Query: 30 DRRMLQLSLSWLGLGPVSASPWLLLQLVGATWLLSRILSWIYNFYDNCCRLRCFPQPPKR 209
DR + L L + S LL L LL R L +FY C RLRCFPQPP+R
Sbjct: 6 DRLLHLLGLEKTAFRIYAVSTLLLFLLFFLFRLLLRFLRLCRSFYITCRRLRCFPQPPRR 65
Query: 210 NWFWGHLGLAKNNEEGMRLVEDLGHCFRDVHLWWLGPLYPVLRLVHPNFVAPLLQAPATI 389
NW GHLG+ NE G++ + + V L W+GP+ P+L LVHP+++ PLL A A I
Sbjct: 66 NWLLGHLGMYLPNEAGLQDEKKVLDNMHHVLLVWMGPVLPLLVLVHPDYIKPLLGASAAI 125
Query: 390 IPKDMLFYSFLKPWLGVGLLLSAGEKWSHQRRLLTPAFHFDILKSYVKIFNRSADIMHAK 569
PKD LFY FLKPWLG GLLLS G+KWS RRLLTPAFHFDILK Y+KIFN+SADIMHAK
Sbjct: 126 APKDDLFYGFLKPWLGDGLLLSKGDKWSRHRRLLTPAFHFDILKPYMKIFNQSADIMHAK 185
Query: 570 WQHLASEGHTRLDMFEHISLMTLDSLQKCVFSFDSNCQEKPSEYIAAISELSALVTKRNE 749
W+HLA LDMFEHISLMTLDSLQKCVFS++SNCQEK S+YI+AI ELSAL +R
Sbjct: 186 WRHLAEGSAVSLDMFEHISLMTLDSLQKCVFSYNSNCQEKMSDYISAIIELSALSVRRQY 245
Query: 750 QIFLHKDFLYYLTPEGRRFRKACRLVHDFTDAVIQERRRTLISQGSQDFLRAKAKAKTLD 929
++ + DF+YY + +GRRFR+AC +VH FT VIQERRR L QG++ +L+AK + KTLD
Sbjct: 246 RLHHYLDFIYYRSADGRRFRQACDMVHHFTTEVIQERRRALRQQGAEAWLKAK-QGKTLD 304
Query: 930 FIDVLLLAKDEDGKGLSDEDIRTEADTFMFAGHDTTASGLSWVLYNLXKHPEY 1088
FIDVLLLA+DEDGK LSDEDIR EADTFMF GHDTT+SG+SW+L+NL K+PEY
Sbjct: 305 FIDVLLLARDEDGKELSDEDIRAEADTFMFEGHDTTSSGISWMLFNLAKYPEY 357
>ref|NP_000769.2| cytochrome P450 4A11 [Homo sapiens].
Length = 519
Score = 228 bits (580), Expect = 1e-59
Identities = 129/305 (42%), Positives = 180/305 (59%), Gaps = 2/305 (0%)
Frame = +3
Query: 180 LRCFPQPPKRNWFWGHLGLAKNNEEGMRLVEDLGHCFRDVHLWWLGPLYPVLRLVHPNFV 359
L+ FP PP +W +GH+ + ++E R ++ F WL ++L P+++
Sbjct: 48 LQQFPCPPS-HWLFGHIQELQQDQELQR-IQKWVETFPSACPHWLWGGKVRVQLYDPDYM 105
Query: 360 APLLQAPATIIPKDMLFYSFLKPWLGVGLLLSAGEKWSHQRRLLTPAFHFDILKSYVKIF 539
+L PK Y FL PW+G GLLL G+ W RR+LTPAFH+DILK YV +
Sbjct: 106 KVILGRSD---PKSHGSYRFLAPWIGYGLLLLNGQTWFQHRRMLTPAFHYDILKPYVGLM 162
Query: 540 NRSADIMHAKWQHLASEGHTRLDMFEHISLMTLDSLQKCVFSFDSNCQ--EKPSEYIAAI 713
S +M KW+ L + + L++F+H+SLMTLD++ KC FS + Q YI AI
Sbjct: 163 ADSVRVMLDKWEELLGQD-SPLEVFQHVSLMTLDTIMKCAFSHQGSIQVDRNSQSYIQAI 221
Query: 714 SELSALVTKRNEQIFLHKDFLYYLTPEGRRFRKACRLVHDFTDAVIQERRRTLISQGSQD 893
S+L+ LV R F D +Y LT GR +AC+L H TD VIQ R+ L +G +
Sbjct: 222 SDLNNLVFSRVRNAFHQNDTIYSLTSAGRWTHRACQLAHQHTDQVIQLRKAQLQKEGELE 281
Query: 894 FLRAKAKAKTLDFIDVLLLAKDEDGKGLSDEDIRTEADTFMFAGHDTTASGLSWVLYNLX 1073
++ K + LDF+D+LLLAK E+G LSD+D+R E DTFMF GHDTTASG+SW+LY L
Sbjct: 282 KIKRK---RHLDFLDILLLAKMENGSILSDKDLRAEVDTFMFEGHDTTASGISWILYALA 338
Query: 1074 KHPEY 1088
HP++
Sbjct: 339 THPKH 343
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 50,294,351
Number of extensions: 1591928
Number of successful extensions: 6912
Number of sequences better than 1.0e-05: 19
Number of HSP's gapped: 6862
Number of HSP's successfully gapped: 19
Length of query: 362
Length of database: 18,297,164
Length adjustment: 104
Effective length of query: 258
Effective length of database: 14,868,908
Effective search space: 3836178264
Effective search space used: 3836178264
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002326
(1088 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_570952.1| cytochrome P450, family 4, subfamily f, polypep... 553 e-158
Alignment gi|NP_001094915.1| cytochrome P450, family 4, subfamily f, poly... 541 e-154
Alignment gi|NP_077762.1| cytochrome P450, family 4, subfamily f, polypep... 530 e-150
Alignment gi|NP_077764.2| leukotriene-B(4) omega-hydroxylase 2 [Mus muscu... 521 e-148
Alignment gi|NP_001093657.1| predicted gene 9705 [Mus musculus]. 519 e-147
Alignment gi|NP_001095058.1| cytochrome P450, family 4, subfamily f, poly... 503 e-143
Alignment gi|NP_598888.1| cytochrome P450, family 4, subfamily f, polypep... 480 e-136
Alignment gi|NP_001191265.1| leukotriene-B4 omega-hydroxylase 3 [Mus musc... 479 e-135
Alignment gi|NP_001191264.1| leukotriene-B4 omega-hydroxylase 3 [Mus musc... 479 e-135
Alignment gi|NP_001191263.1| leukotriene-B4 omega-hydroxylase 3 [Mus musc... 479 e-135
>ref|NP_570952.1| cytochrome P450, family 4, subfamily f, polypeptide 13 [Mus
musculus].
Length = 523
Score = 553 bits (1426), Expect = e-158
Identities = 262/350 (74%), Positives = 300/350 (85%)
Frame = +3
Query: 39 MLQLSLSWLGLGPVSASPWLLLQLVGATWLLSRILSWIYNFYDNCCRLRCFPQPPKRNWF 218
MLQL LSWLG+G ++ASPW LL L GA+W+L+RIL+WIY FYDNC RLRCFPQPPK +WF
Sbjct: 1 MLQLCLSWLGMGSLTASPWHLLLLGGASWILARILAWIYAFYDNCSRLRCFPQPPKPSWF 60
Query: 219 WGHLGLAKNNEEGMRLVEDLGHCFRDVHLWWLGPLYPVLRLVHPNFVAPLLQAPATIIPK 398
WGHL L KNNEE M+ + LGH F DVHL W+GP+YP+LRLVHPNF+APLLQA A + PK
Sbjct: 61 WGHLALMKNNEESMQFITHLGHDFHDVHLSWVGPVYPILRLVHPNFIAPLLQASAAVAPK 120
Query: 399 DMLFYSFLKPWLGVGLLLSAGEKWSHQRRLLTPAFHFDILKSYVKIFNRSADIMHAKWQH 578
+M Y FLKPWLG GLL+SAG+KWSH RRLLTPAFHFDILKSYVKIFN+S +IMHAKWQ
Sbjct: 121 EMTLYGFLKPWLGDGLLMSAGDKWSHHRRLLTPAFHFDILKSYVKIFNKSVNIMHAKWQC 180
Query: 579 LASEGHTRLDMFEHISLMTLDSLQKCVFSFDSNCQEKPSEYIAAISELSALVTKRNEQIF 758
LAS+G +RLDMFEHISLMTLDSLQKC+FS DSNCQE S+YIAAI ELS+LV KR+ Q F
Sbjct: 181 LASKGTSRLDMFEHISLMTLDSLQKCIFSVDSNCQESDSKYIAAILELSSLVVKRHRQPF 240
Query: 759 LHKDFLYYLTPEGRRFRKACRLVHDFTDAVIQERRRTLISQGSQDFLRAKAKAKTLDFID 938
L+ D LYYLT +GRRFRKAC LVH+FTDAVI+ERR TL +QG +FL+AKAK KTLDFID
Sbjct: 241 LYLDLLYYLTADGRRFRKACDLVHNFTDAVIKERRSTLNTQG-VEFLKAKAKTKTLDFID 299
Query: 939 VLLLAKDEDGKGLSDEDIRTEADTFMFAGHDTTASGLSWVLYNLXKHPEY 1088
VLL+A+DE GKGLS+EDIR EADTFMF GHDTT S LSW+LYNL +HPEY
Sbjct: 300 VLLMAEDEHGKGLSNEDIRAEADTFMFGGHDTTTSALSWILYNLARHPEY 349
>ref|NP_001094915.1| cytochrome P450, family 4, subfamily f, polypeptide 17 [Mus
musculus].
Length = 524
Score = 541 bits (1395), Expect = e-154
Identities = 252/350 (72%), Positives = 291/350 (83%)
Frame = +3
Query: 39 MLQLSLSWLGLGPVSASPWLLLQLVGATWLLSRILSWIYNFYDNCCRLRCFPQPPKRNWF 218
MLQL LSWLGLGP +A PW LLQLVGA+ L+RIL+WI FYDN CRLRCFP+PP R+WF
Sbjct: 1 MLQLGLSWLGLGPGAAFPWQLLQLVGASLFLARILTWICAFYDNYCRLRCFPEPPSRHWF 60
Query: 219 WGHLGLAKNNEEGMRLVEDLGHCFRDVHLWWLGPLYPVLRLVHPNFVAPLLQAPATIIPK 398
WGH+ + KNNEEG++L+ + H F DVHL W+GP YP+LRL+HP F+ P+LQA A + PK
Sbjct: 61 WGHMSMVKNNEEGLQLLTERSHQFHDVHLCWIGPFYPILRLIHPKFIGPILQASAAVAPK 120
Query: 399 DMLFYSFLKPWLGVGLLLSAGEKWSHQRRLLTPAFHFDILKSYVKIFNRSADIMHAKWQH 578
+M+FY FLKPWLG GLL+SAGEKWS R LLTPAFHFDILK Y+K FN+S +IMHAKWQ
Sbjct: 121 EMIFYGFLKPWLGDGLLVSAGEKWSRHRHLLTPAFHFDILKPYMKNFNKSVNIMHAKWQR 180
Query: 579 LASEGHTRLDMFEHISLMTLDSLQKCVFSFDSNCQEKPSEYIAAISELSALVTKRNEQIF 758
L ++G LDM EHISLMTLDSLQ CVFSFDSNCQE PSEYIAAI ELS+L+ KR+ Q F
Sbjct: 181 LTTKGTACLDMLEHISLMTLDSLQNCVFSFDSNCQESPSEYIAAIQELSSLIVKRHHQPF 240
Query: 759 LHKDFLYYLTPEGRRFRKACRLVHDFTDAVIQERRRTLISQGSQDFLRAKAKAKTLDFID 938
L+ DFLYY T +GRRFRKAC LVH+FTDAVI+ERRRTL SQ +FL++K K+KTLDFID
Sbjct: 241 LYLDFLYYCTADGRRFRKACDLVHNFTDAVIRERRRTLSSQNLDEFLKSKTKSKTLDFID 300
Query: 939 VLLLAKDEDGKGLSDEDIRTEADTFMFAGHDTTASGLSWVLYNLXKHPEY 1088
VLLLAKDE GK LSDEDIR EADTFMF GHDTTAS LSW+LYNL +HPEY
Sbjct: 301 VLLLAKDEHGKELSDEDIRAEADTFMFGGHDTTASALSWILYNLARHPEY 350
>ref|NP_077762.1| cytochrome P450, family 4, subfamily f, polypeptide 16 [Mus
musculus].
Length = 524
Score = 530 bits (1364), Expect = e-150
Identities = 252/350 (72%), Positives = 294/350 (84%)
Frame = +3
Query: 39 MLQLSLSWLGLGPVSASPWLLLQLVGATWLLSRILSWIYNFYDNCCRLRCFPQPPKRNWF 218
ML+LS+S L LG V S W LL L A+W+L+RIL+W Y+FY+NC RL CFPQPPK+NWF
Sbjct: 1 MLRLSVSGLDLGSVVTSSWHLLLLGVASWILARILAWTYSFYENCSRLSCFPQPPKKNWF 60
Query: 219 WGHLGLAKNNEEGMRLVEDLGHCFRDVHLWWLGPLYPVLRLVHPNFVAPLLQAPATIIPK 398
GHLG+ ++NEEGM+LV ++G F+DVHL+WLGP+ PVLR+V P FVAPLLQAPA + PK
Sbjct: 61 SGHLGMIQSNEEGMQLVTEMGQTFQDVHLFWLGPVIPVLRIVDPAFVAPLLQAPALVAPK 120
Query: 399 DMLFYSFLKPWLGVGLLLSAGEKWSHQRRLLTPAFHFDILKSYVKIFNRSADIMHAKWQH 578
DM F FLKPWLG GL LS+G+KWS RRLLTPAFHFDILK YVKIFN+S +IMHAKW+H
Sbjct: 121 DMTFLRFLKPWLGDGLFLSSGDKWSRHRRLLTPAFHFDILKPYVKIFNQSVNIMHAKWKH 180
Query: 579 LASEGHTRLDMFEHISLMTLDSLQKCVFSFDSNCQEKPSEYIAAISELSALVTKRNEQIF 758
L+SEG RL+MFEHISLMTLDSLQKC+F FDSNCQE PSEYI+AI ELS+L+ KR+ Q+F
Sbjct: 181 LSSEGSARLEMFEHISLMTLDSLQKCLFGFDSNCQESPSEYISAILELSSLIIKRSLQLF 240
Query: 759 LHKDFLYYLTPEGRRFRKACRLVHDFTDAVIQERRRTLISQGSQDFLRAKAKAKTLDFID 938
L DFLYY T +GRRFRKAC LVH+FTDAVI+ERR TL SQ +FL++K K+KTLDFID
Sbjct: 241 LFVDFLYYHTADGRRFRKACDLVHNFTDAVIRERRHTLSSQNHDEFLKSKTKSKTLDFID 300
Query: 939 VLLLAKDEDGKGLSDEDIRTEADTFMFAGHDTTASGLSWVLYNLXKHPEY 1088
VLLLAKDE GK LSDEDIR EADTFMF GHDTTAS LSW+LYNL +HPEY
Sbjct: 301 VLLLAKDEHGKELSDEDIRAEADTFMFGGHDTTASALSWILYNLARHPEY 350
>ref|NP_077764.2| leukotriene-B(4) omega-hydroxylase 2 [Mus musculus].
Length = 524
Score = 521 bits (1341), Expect = e-148
Identities = 245/350 (70%), Positives = 288/350 (82%)
Frame = +3
Query: 39 MLQLSLSWLGLGPVSASPWLLLQLVGATWLLSRILSWIYNFYDNCCRLRCFPQPPKRNWF 218
M QLS+SW+GLG +ASPWLLL L GA+ LL+ IL+ IY ++N RLRCFPQPPKRNW
Sbjct: 1 MSQLSMSWMGLGHTAASPWLLLLLAGASCLLAYILTPIYGVFENSLRLRCFPQPPKRNWI 60
Query: 219 WGHLGLAKNNEEGMRLVEDLGHCFRDVHLWWLGPLYPVLRLVHPNFVAPLLQAPATIIPK 398
GHLGL +++EEG+ ++ L FRD WW+GPL+PV+R+ HP F+ P++ APA + PK
Sbjct: 61 LGHLGLIQSSEEGLLYIQSLVRTFRDACCWWVGPLHPVIRIFHPAFIKPVVLAPALVAPK 120
Query: 399 DMLFYSFLKPWLGVGLLLSAGEKWSHQRRLLTPAFHFDILKSYVKIFNRSADIMHAKWQH 578
D +FY FLKPWLG GLL+S G+KWS RR+LTPAFHF+ILK YVK+FN S +IMHAKWQ
Sbjct: 121 DTVFYRFLKPWLGDGLLMSTGDKWSRHRRMLTPAFHFNILKPYVKVFNDSTNIMHAKWQR 180
Query: 579 LASEGHTRLDMFEHISLMTLDSLQKCVFSFDSNCQEKPSEYIAAISELSALVTKRNEQIF 758
LAS+G L+MFEHISLMTLDSLQKCVFSFDSNCQEKPSEYI AI ELS LV +R++++
Sbjct: 181 LASKGSAYLNMFEHISLMTLDSLQKCVFSFDSNCQEKPSEYITAILELSTLVARRHQRLL 240
Query: 759 LHKDFLYYLTPEGRRFRKACRLVHDFTDAVIQERRRTLISQGSQDFLRAKAKAKTLDFID 938
LH D YYLT +G RFRKACRLVHDFTDAVI+ERRRTL+ QG D L+AKAKAKTLDFID
Sbjct: 241 LHVDLFYYLTHDGMRFRKACRLVHDFTDAVIRERRRTLLDQGGVDVLKAKAKAKTLDFID 300
Query: 939 VLLLAKDEDGKGLSDEDIRTEADTFMFAGHDTTASGLSWVLYNLXKHPEY 1088
VLLL+KDE GK LSDEDIR EADTFMF GHDTTASGLSW+LYNL +HPEY
Sbjct: 301 VLLLSKDEHGKALSDEDIRAEADTFMFGGHDTTASGLSWILYNLARHPEY 350
>ref|NP_001093657.1| predicted gene 9705 [Mus musculus].
Length = 546
Score = 519 bits (1336), Expect = e-147
Identities = 247/350 (70%), Positives = 290/350 (82%)
Frame = +3
Query: 39 MLQLSLSWLGLGPVSASPWLLLQLVGATWLLSRILSWIYNFYDNCCRLRCFPQPPKRNWF 218
ML+LS+S L LG V W LL L A+W+L+RIL+W Y+F +NC RLRCFPQPPKRNWF
Sbjct: 1 MLRLSVSGLDLGSVVTLSWHLLLLGAASWILARILAWTYSFCENCSRLRCFPQPPKRNWF 60
Query: 219 WGHLGLAKNNEEGMRLVEDLGHCFRDVHLWWLGPLYPVLRLVHPNFVAPLLQAPATIIPK 398
GHLG+ ++NEEGM+L+ + G +RDVHL WLGP+ PVLR+V P FVAPLL A A + PK
Sbjct: 61 LGHLGMIEHNEEGMQLMTEAGQTYRDVHLCWLGPVIPVLRIVDPAFVAPLLLASALVAPK 120
Query: 399 DMLFYSFLKPWLGVGLLLSAGEKWSHQRRLLTPAFHFDILKSYVKIFNRSADIMHAKWQH 578
D F++F+KPWLG GL L++G+KWS RRLLTPAFHFDILK YVKIFN+S +IMHAKW+H
Sbjct: 121 DTTFHTFVKPWLGDGLFLNSGDKWSRHRRLLTPAFHFDILKPYVKIFNQSVNIMHAKWKH 180
Query: 579 LASEGHTRLDMFEHISLMTLDSLQKCVFSFDSNCQEKPSEYIAAISELSALVTKRNEQIF 758
L+SEG RL+MFEHISLMTLDSLQKC+F FDSNCQE PSEYI+AI ELS+LV KR+ Q+F
Sbjct: 181 LSSEGSARLEMFEHISLMTLDSLQKCLFGFDSNCQESPSEYISAILELSSLVIKRSHQLF 240
Query: 759 LHKDFLYYLTPEGRRFRKACRLVHDFTDAVIQERRRTLISQGSQDFLRAKAKAKTLDFID 938
L DFLYY T +GRRFRKAC LVH+FTDAVI+ERR TL SQ +FL++K K+KTLDFID
Sbjct: 241 LFVDFLYYHTADGRRFRKACDLVHNFTDAVIRERRHTLSSQNHDEFLKSKTKSKTLDFID 300
Query: 939 VLLLAKDEDGKGLSDEDIRTEADTFMFAGHDTTASGLSWVLYNLXKHPEY 1088
VLLLAKDE GK LSDEDIR EADTFMF GHDTTAS LSW+LYNL +HPEY
Sbjct: 301 VLLLAKDEHGKELSDEDIRAEADTFMFGGHDTTASALSWILYNLARHPEY 350
>ref|NP_001095058.1| cytochrome P450, family 4, subfamily f, polypeptide 40 [Mus
musculus].
Length = 524
Score = 503 bits (1296), Expect = e-143
Identities = 239/350 (68%), Positives = 280/350 (80%)
Frame = +3
Query: 39 MLQLSLSWLGLGPVSASPWLLLQLVGATWLLSRILSWIYNFYDNCCRLRCFPQPPKRNWF 218
M L LSWLGLGP+SASPWLL LVG +W L+R L+ +Y Y C RL FPQPPK+NWF
Sbjct: 1 MRYLDLSWLGLGPMSASPWLLFFLVGISWFLARFLTQLYTLYAKCQRLCGFPQPPKKNWF 60
Query: 219 WGHLGLAKNNEEGMRLVEDLGHCFRDVHLWWLGPLYPVLRLVHPNFVAPLLQAPATIIPK 398
WGHLG++ EEGM+ V +L + + WLGP+ P++ L HP+ + +L A A + PK
Sbjct: 61 WGHLGMSPPTEEGMKQVTELVTTYPQGFMTWLGPIVPLITLCHPDIIRSVLSASAAVAPK 120
Query: 399 DMLFYSFLKPWLGVGLLLSAGEKWSHQRRLLTPAFHFDILKSYVKIFNRSADIMHAKWQH 578
D +FYSFLKPWLG GLL+SAG+KW+ RR+LTPAFHF+ILK YVKIFN S +IMHAKW
Sbjct: 121 DDIFYSFLKPWLGDGLLVSAGDKWNRHRRMLTPAFHFNILKPYVKIFNDSTNIMHAKWLR 180
Query: 579 LASEGHTRLDMFEHISLMTLDSLQKCVFSFDSNCQEKPSEYIAAISELSALVTKRNEQIF 758
LAS G TRL+MFE+ISLMTLD+LQKCVFSF+SNCQEKPS+YIAAI ELS L KRNEQ+
Sbjct: 181 LASGGSTRLNMFENISLMTLDTLQKCVFSFNSNCQEKPSQYIAAILELSTLAVKRNEQLL 240
Query: 759 LHKDFLYYLTPEGRRFRKACRLVHDFTDAVIQERRRTLISQGSQDFLRAKAKAKTLDFID 938
+H D LY LTP+G RF KACRLVHDFTDAVIQERRRTL+ G D ++AKAK+KTLDFID
Sbjct: 241 MHVDLLYRLTPDGMRFYKACRLVHDFTDAVIQERRRTLLKHGGDDIIKAKAKSKTLDFID 300
Query: 939 VLLLAKDEDGKGLSDEDIRTEADTFMFAGHDTTASGLSWVLYNLXKHPEY 1088
VLLL KDEDGK LSDEDIR EADTFMF GHDTTASGLSW+LYNL +HPE+
Sbjct: 301 VLLLTKDEDGKELSDEDIRAEADTFMFRGHDTTASGLSWILYNLARHPEH 350
>ref|NP_598888.1| cytochrome P450, family 4, subfamily f, polypeptide 15 [Mus
musculus].
Length = 534
Score = 480 bits (1235), Expect = e-136
Identities = 237/351 (67%), Positives = 276/351 (78%)
Frame = +3
Query: 36 RMLQLSLSWLGLGPVSASPWLLLQLVGATWLLSRILSWIYNFYDNCCRLRCFPQPPKRNW 215
RM QL LSWLGL ++SPWLLL L+GA+WLL+R+L+ Y FY L FPQPPK NW
Sbjct: 5 RMPQLDLSWLGLRLEASSPWLLLLLIGASWLLARVLTQTYIFYRTYHHLCDFPQPPKWNW 64
Query: 216 FWGHLGLAKNNEEGMRLVEDLGHCFRDVHLWWLGPLYPVLRLVHPNFVAPLLQAPATIIP 395
F GHLG+ E G++ V +L + + WLGP+ P++ L HP+ + +L A A++
Sbjct: 65 FLGHLGMITPTEHGLKEVTNLVATYPQGFMTWLGPIIPIITLCHPDIIRSVLNASASVAL 124
Query: 396 KDMLFYSFLKPWLGVGLLLSAGEKWSHQRRLLTPAFHFDILKSYVKIFNRSADIMHAKWQ 575
K+++FYSFLKPWLG GLLLS G+KWS RR+LTPAFHF+ILK YVKIFN S +IMHAKWQ
Sbjct: 125 KEVVFYSFLKPWLGDGLLLSDGDKWSSHRRMLTPAFHFNILKPYVKIFNDSTNIMHAKWQ 184
Query: 576 HLASEGHTRLDMFEHISLMTLDSLQKCVFSFDSNCQEKPSEYIAAISELSALVTKRNEQI 755
HLAS G RLD+FE+ISLMTLDSLQKCVFSFDSNCQE PSEYI+AI ELSALVTKR Q+
Sbjct: 185 HLASGGSARLDVFENISLMTLDSLQKCVFSFDSNCQENPSEYISAILELSALVTKRYHQL 244
Query: 756 FLHKDFLYYLTPEGRRFRKACRLVHDFTDAVIQERRRTLISQGSQDFLRAKAKAKTLDFI 935
LH D LY LT GRRF KAC LVH FTDAVIQ+RRRTL S+ D L+AKAK+KTLDFI
Sbjct: 245 LLHIDSLYQLTCSGRRFHKACHLVHSFTDAVIQDRRRTLPSKHEDDVLKAKAKSKTLDFI 304
Query: 936 DVLLLAKDEDGKGLSDEDIRTEADTFMFAGHDTTASGLSWVLYNLXKHPEY 1088
DVLLL+KDEDGK LSDEDIR EADTFMF GHDTTASGLSW+LYNL +HPEY
Sbjct: 305 DVLLLSKDEDGKELSDEDIRAEADTFMFEGHDTTASGLSWILYNLARHPEY 355
>ref|NP_001191265.1| leukotriene-B4 omega-hydroxylase 3 [Mus musculus].
Length = 524
Score = 479 bits (1234), Expect = e-135
Identities = 234/350 (66%), Positives = 273/350 (78%)
Frame = +3
Query: 39 MLQLSLSWLGLGPVSASPWLLLQLVGATWLLSRILSWIYNFYDNCCRLRCFPQPPKRNWF 218
M QLSLSWLGLGP A PW L L+GA+W+L+RIL IY Y N L FPQPPKRNW
Sbjct: 1 MSQLSLSWLGLGPEVAFPWKTLLLLGASWILARILIQIYAAYRNYRHLHGFPQPPKRNWL 60
Query: 219 WGHLGLAKNNEEGMRLVEDLGHCFRDVHLWWLGPLYPVLRLVHPNFVAPLLQAPATIIPK 398
GH+G+ E+G++ + L + L W+GP+ PV+ L H + V +L A A + K
Sbjct: 61 MGHVGMVTPTEQGLKELTRLVGTYPQGFLMWIGPMVPVITLCHSDIVRSILNASAAVALK 120
Query: 399 DMLFYSFLKPWLGVGLLLSAGEKWSHQRRLLTPAFHFDILKSYVKIFNRSADIMHAKWQH 578
D++FYS LKPWLG GLL+SAG+KWS RR+LTPAFHF+ILK YVKIFN S +IMHAKWQ
Sbjct: 121 DVIFYSILKPWLGDGLLVSAGDKWSRHRRMLTPAFHFNILKPYVKIFNDSTNIMHAKWQR 180
Query: 579 LASEGHTRLDMFEHISLMTLDSLQKCVFSFDSNCQEKPSEYIAAISELSALVTKRNEQIF 758
L S+G RLDMFEH+SLMTLDSLQKCVFSFDSNCQEK SEYIAAI ELSALV KR++Q
Sbjct: 181 LISDGSARLDMFEHVSLMTLDSLQKCVFSFDSNCQEKSSEYIAAILELSALVAKRHQQPL 240
Query: 759 LHKDFLYYLTPEGRRFRKACRLVHDFTDAVIQERRRTLISQGSQDFLRAKAKAKTLDFID 938
+ D LY LTP+G RFRKAC +VH+FTDAVI+ER RTL QG DFL++KAK+KTLDFID
Sbjct: 241 MFMDLLYNLTPDGMRFRKACNVVHEFTDAVIRERHRTLPDQGLDDFLKSKAKSKTLDFID 300
Query: 939 VLLLAKDEDGKGLSDEDIRTEADTFMFAGHDTTASGLSWVLYNLXKHPEY 1088
VLLL+KDEDGK LSDEDIR EADTFMF GHDTTASGLSW+LYNL +HPEY
Sbjct: 301 VLLLSKDEDGKELSDEDIRAEADTFMFEGHDTTASGLSWILYNLARHPEY 350
>ref|NP_001191264.1| leukotriene-B4 omega-hydroxylase 3 [Mus musculus].
Length = 524
Score = 479 bits (1234), Expect = e-135
Identities = 234/350 (66%), Positives = 273/350 (78%)
Frame = +3
Query: 39 MLQLSLSWLGLGPVSASPWLLLQLVGATWLLSRILSWIYNFYDNCCRLRCFPQPPKRNWF 218
M QLSLSWLGLGP A PW L L+GA+W+L+RIL IY Y N L FPQPPKRNW
Sbjct: 1 MSQLSLSWLGLGPEVAFPWKTLLLLGASWILARILIQIYAAYRNYRHLHGFPQPPKRNWL 60
Query: 219 WGHLGLAKNNEEGMRLVEDLGHCFRDVHLWWLGPLYPVLRLVHPNFVAPLLQAPATIIPK 398
GH+G+ E+G++ + L + L W+GP+ PV+ L H + V +L A A + K
Sbjct: 61 MGHVGMVTPTEQGLKELTRLVGTYPQGFLMWIGPMVPVITLCHSDIVRSILNASAAVALK 120
Query: 399 DMLFYSFLKPWLGVGLLLSAGEKWSHQRRLLTPAFHFDILKSYVKIFNRSADIMHAKWQH 578
D++FYS LKPWLG GLL+SAG+KWS RR+LTPAFHF+ILK YVKIFN S +IMHAKWQ
Sbjct: 121 DVIFYSILKPWLGDGLLVSAGDKWSRHRRMLTPAFHFNILKPYVKIFNDSTNIMHAKWQR 180
Query: 579 LASEGHTRLDMFEHISLMTLDSLQKCVFSFDSNCQEKPSEYIAAISELSALVTKRNEQIF 758
L S+G RLDMFEH+SLMTLDSLQKCVFSFDSNCQEK SEYIAAI ELSALV KR++Q
Sbjct: 181 LISDGSARLDMFEHVSLMTLDSLQKCVFSFDSNCQEKSSEYIAAILELSALVAKRHQQPL 240
Query: 759 LHKDFLYYLTPEGRRFRKACRLVHDFTDAVIQERRRTLISQGSQDFLRAKAKAKTLDFID 938
+ D LY LTP+G RFRKAC +VH+FTDAVI+ER RTL QG DFL++KAK+KTLDFID
Sbjct: 241 MFMDLLYNLTPDGMRFRKACNVVHEFTDAVIRERHRTLPDQGLDDFLKSKAKSKTLDFID 300
Query: 939 VLLLAKDEDGKGLSDEDIRTEADTFMFAGHDTTASGLSWVLYNLXKHPEY 1088
VLLL+KDEDGK LSDEDIR EADTFMF GHDTTASGLSW+LYNL +HPEY
Sbjct: 301 VLLLSKDEDGKELSDEDIRAEADTFMFEGHDTTASGLSWILYNLARHPEY 350
>ref|NP_001191263.1| leukotriene-B4 omega-hydroxylase 3 [Mus musculus].
Length = 524
Score = 479 bits (1234), Expect = e-135
Identities = 234/350 (66%), Positives = 273/350 (78%)
Frame = +3
Query: 39 MLQLSLSWLGLGPVSASPWLLLQLVGATWLLSRILSWIYNFYDNCCRLRCFPQPPKRNWF 218
M QLSLSWLGLGP A PW L L+GA+W+L+RIL IY Y N L FPQPPKRNW
Sbjct: 1 MSQLSLSWLGLGPEVAFPWKTLLLLGASWILARILIQIYAAYRNYRHLHGFPQPPKRNWL 60
Query: 219 WGHLGLAKNNEEGMRLVEDLGHCFRDVHLWWLGPLYPVLRLVHPNFVAPLLQAPATIIPK 398
GH+G+ E+G++ + L + L W+GP+ PV+ L H + V +L A A + K
Sbjct: 61 MGHVGMVTPTEQGLKELTRLVGTYPQGFLMWIGPMVPVITLCHSDIVRSILNASAAVALK 120
Query: 399 DMLFYSFLKPWLGVGLLLSAGEKWSHQRRLLTPAFHFDILKSYVKIFNRSADIMHAKWQH 578
D++FYS LKPWLG GLL+SAG+KWS RR+LTPAFHF+ILK YVKIFN S +IMHAKWQ
Sbjct: 121 DVIFYSILKPWLGDGLLVSAGDKWSRHRRMLTPAFHFNILKPYVKIFNDSTNIMHAKWQR 180
Query: 579 LASEGHTRLDMFEHISLMTLDSLQKCVFSFDSNCQEKPSEYIAAISELSALVTKRNEQIF 758
L S+G RLDMFEH+SLMTLDSLQKCVFSFDSNCQEK SEYIAAI ELSALV KR++Q
Sbjct: 181 LISDGSARLDMFEHVSLMTLDSLQKCVFSFDSNCQEKSSEYIAAILELSALVAKRHQQPL 240
Query: 759 LHKDFLYYLTPEGRRFRKACRLVHDFTDAVIQERRRTLISQGSQDFLRAKAKAKTLDFID 938
+ D LY LTP+G RFRKAC +VH+FTDAVI+ER RTL QG DFL++KAK+KTLDFID
Sbjct: 241 MFMDLLYNLTPDGMRFRKACNVVHEFTDAVIRERHRTLPDQGLDDFLKSKAKSKTLDFID 300
Query: 939 VLLLAKDEDGKGLSDEDIRTEADTFMFAGHDTTASGLSWVLYNLXKHPEY 1088
VLLL+KDEDGK LSDEDIR EADTFMF GHDTTASGLSW+LYNL +HPEY
Sbjct: 301 VLLLSKDEDGKELSDEDIRAEADTFMFEGHDTTASGLSWILYNLARHPEY 350
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 42,389,800
Number of extensions: 1324155
Number of successful extensions: 5916
Number of sequences better than 1.0e-05: 32
Number of HSP's gapped: 5833
Number of HSP's successfully gapped: 32
Length of query: 362
Length of database: 15,617,559
Length adjustment: 103
Effective length of query: 259
Effective length of database: 12,523,851
Effective search space: 3243677409
Effective search space used: 3243677409
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002326
(1088 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_003123482.1| PREDICTED: leukotriene-B(4) omega-hydroxylas... 544 e-155
Alignment gi|XP_003123481.1| PREDICTED: leukotriene-B(4) omega-hydroxylas... 526 e-150
Alignment gi|XP_003354174.1| PREDICTED: cytochrome P450 4F6-like [Sus scr... 427 e-120
Alignment gi|XP_003354173.1| PREDICTED: cytochrome P450 4F22-like [Sus sc... 422 e-118
Alignment gi|XP_003354175.1| PREDICTED: leukotriene-B(4) omega-hydroxylas... 250 1e-66
Alignment gi|XP_003128064.2| PREDICTED: cytochrome P450 4A24-like isoform... 233 1e-61
Alignment gi|XP_003127953.1| PREDICTED: cytochrome P450 4A11-like [Sus sc... 233 2e-61
Alignment gi|XP_003128078.2| PREDICTED: cytochrome P450 4A24-like [Sus sc... 232 2e-61
Alignment gi|XP_003356525.1| PREDICTED: cytochrome P450 4A24-like isoform... 232 3e-61
Alignment gi|XP_003356524.1| PREDICTED: cytochrome P450 4A24-like [Sus sc... 228 4e-60
>ref|XP_003123482.1| PREDICTED: leukotriene-B(4) omega-hydroxylase 2 isoform 2 [Sus
scrofa].
Length = 524
Score = 544 bits (1402), Expect = e-155
Identities = 260/350 (74%), Positives = 292/350 (83%)
Frame = +3
Query: 39 MLQLSLSWLGLGPVSASPWLLLQLVGATWLLSRILSWIYNFYDNCCRLRCFPQPPKRNWF 218
MLQLSLSWLGLGPV ASPWLLL LVGA+WLL+R+L W DN RLR FPQPPK NW
Sbjct: 1 MLQLSLSWLGLGPVEASPWLLLLLVGASWLLARVLVWTCTSLDNVRRLRGFPQPPKPNWL 60
Query: 219 WGHLGLAKNNEEGMRLVEDLGHCFRDVHLWWLGPLYPVLRLVHPNFVAPLLQAPATIIPK 398
GH+G +++EEG+ +DL + DV WW+GP + V+R+ HP + P+L APA + PK
Sbjct: 61 LGHMGQIESSEEGLLYTQDLASTYGDVCCWWVGPWHAVIRIFHPTCIKPVLFAPAAVAPK 120
Query: 399 DMLFYSFLKPWLGVGLLLSAGEKWSHQRRLLTPAFHFDILKSYVKIFNRSADIMHAKWQH 578
D++FY FLKPWLG GLLLSAG+KWS RR+LTPAFHF+ILK Y+KIFN S ++MHAKWQ
Sbjct: 121 DVVFYDFLKPWLGDGLLLSAGDKWSSHRRMLTPAFHFNILKPYMKIFNDSVNVMHAKWQR 180
Query: 579 LASEGHTRLDMFEHISLMTLDSLQKCVFSFDSNCQEKPSEYIAAISELSALVTKRNEQIF 758
L +EGH RLDMFEHISLMTLDSLQKCVFSFDSNCQEKPSEYIAAI ELSALV KR++QIF
Sbjct: 181 LVTEGHNRLDMFEHISLMTLDSLQKCVFSFDSNCQEKPSEYIAAILELSALVAKRHQQIF 240
Query: 759 LHKDFLYYLTPEGRRFRKACRLVHDFTDAVIQERRRTLISQGSQDFLRAKAKAKTLDFID 938
LH DFLYYLTP+G RF KACRLVHDFTDAVIQERR TL ++G DFL+AKAKAKTLD ID
Sbjct: 241 LHLDFLYYLTPDGWRFHKACRLVHDFTDAVIQERRNTLPTEGIDDFLKAKAKAKTLDIID 300
Query: 939 VLLLAKDEDGKGLSDEDIRTEADTFMFAGHDTTASGLSWVLYNLXKHPEY 1088
VLLL KDEDGKGLSDEDIR EADTFMF GHDTTASGLSWVLYNL KHPEY
Sbjct: 301 VLLLTKDEDGKGLSDEDIRAEADTFMFEGHDTTASGLSWVLYNLAKHPEY 350
>ref|XP_003123481.1| PREDICTED: leukotriene-B(4) omega-hydroxylase 2 isoform 1 [Sus
scrofa].
Length = 524
Score = 526 bits (1356), Expect = e-150
Identities = 253/350 (72%), Positives = 286/350 (81%)
Frame = +3
Query: 39 MLQLSLSWLGLGPVSASPWLLLQLVGATWLLSRILSWIYNFYDNCCRLRCFPQPPKRNWF 218
MLQLSLSWLGLGPV ASPWLLL LVGA+WLL+R+L W DN RLR FPQPPK NW
Sbjct: 1 MLQLSLSWLGLGPVEASPWLLLLLVGASWLLARVLVWTCTSLDNVRRLRGFPQPPKPNWL 60
Query: 219 WGHLGLAKNNEEGMRLVEDLGHCFRDVHLWWLGPLYPVLRLVHPNFVAPLLQAPATIIPK 398
GH+G EEGM + + + + + + W+GP+ P++ L HP+ + + A A + PK
Sbjct: 61 LGHMGQVPPTEEGMTKLTQMMNTYPNGFMIWMGPITPIIVLCHPDLIRTMANASAAVAPK 120
Query: 399 DMLFYSFLKPWLGVGLLLSAGEKWSHQRRLLTPAFHFDILKSYVKIFNRSADIMHAKWQH 578
D++FY FLKPWLG GLLLSAG+KWS RR+LTPAFHF+ILK Y+KIFN S ++MHAKWQ
Sbjct: 121 DVVFYDFLKPWLGDGLLLSAGDKWSSHRRMLTPAFHFNILKPYMKIFNDSVNVMHAKWQR 180
Query: 579 LASEGHTRLDMFEHISLMTLDSLQKCVFSFDSNCQEKPSEYIAAISELSALVTKRNEQIF 758
L +EGH RLDMFEHISLMTLDSLQKCVFSFDSNCQEKPSEYIAAI ELSALV KR++QIF
Sbjct: 181 LVTEGHNRLDMFEHISLMTLDSLQKCVFSFDSNCQEKPSEYIAAILELSALVAKRHQQIF 240
Query: 759 LHKDFLYYLTPEGRRFRKACRLVHDFTDAVIQERRRTLISQGSQDFLRAKAKAKTLDFID 938
LH DFLYYLTP+G RF KACRLVHDFTDAVIQERR TL ++G DFL+AKAKAKTLD ID
Sbjct: 241 LHLDFLYYLTPDGWRFHKACRLVHDFTDAVIQERRNTLPTEGIDDFLKAKAKAKTLDIID 300
Query: 939 VLLLAKDEDGKGLSDEDIRTEADTFMFAGHDTTASGLSWVLYNLXKHPEY 1088
VLLL KDEDGKGLSDEDIR EADTFMF GHDTTASGLSWVLYNL KHPEY
Sbjct: 301 VLLLTKDEDGKGLSDEDIRAEADTFMFEGHDTTASGLSWVLYNLAKHPEY 350
>ref|XP_003354174.1| PREDICTED: cytochrome P450 4F6-like [Sus scrofa].
Length = 216
Score = 427 bits (1098), Expect = e-120
Identities = 198/216 (91%), Positives = 206/216 (95%)
Frame = +3
Query: 39 MLQLSLSWLGLGPVSASPWLLLQLVGATWLLSRILSWIYNFYDNCCRLRCFPQPPKRNWF 218
MLQLSLSWLGLGPVSASPWLLLQLVGATWLLSRILSWIY+FYDNCCRLRCFPQPPKRNWF
Sbjct: 1 MLQLSLSWLGLGPVSASPWLLLQLVGATWLLSRILSWIYDFYDNCCRLRCFPQPPKRNWF 60
Query: 219 WGHLGLAKNNEEGMRLVEDLGHCFRDVHLWWLGPLYPVLRLVHPNFVAPLLQAPATIIPK 398
WGH LAK+NEE ++L+ED+GH F DV+LWWLGP YP+LRLVHPNFVAPLLQAPATII K
Sbjct: 61 WGHQDLAKSNEECLQLMEDVGHYFHDVYLWWLGPFYPILRLVHPNFVAPLLQAPATIIHK 120
Query: 399 DMLFYSFLKPWLGVGLLLSAGEKWSHQRRLLTPAFHFDILKSYVKIFNRSADIMHAKWQH 578
DM Y FLKPWLGVGLLLSAGEKWSHQRRLLTPAFHFDILKSYVKIFNRSADIMHAKWQH
Sbjct: 121 DMFLYIFLKPWLGVGLLLSAGEKWSHQRRLLTPAFHFDILKSYVKIFNRSADIMHAKWQH 180
Query: 579 LASEGHTRLDMFEHISLMTLDSLQKCVFSFDSNCQE 686
LASEGHTRLDMFEHISLMTLDSLQKCVFSFDSNCQE
Sbjct: 181 LASEGHTRLDMFEHISLMTLDSLQKCVFSFDSNCQE 216
>ref|XP_003354173.1| PREDICTED: cytochrome P450 4F22-like [Sus scrofa].
Length = 531
Score = 422 bits (1084), Expect = e-118
Identities = 213/338 (63%), Positives = 256/338 (75%), Gaps = 1/338 (0%)
Frame = +3
Query: 78 VSASPWLLLQLVGATW-LLSRILSWIYNFYDNCCRLRCFPQPPKRNWFWGHLGLAKNNEE 254
V A LLL L+ + LL + L + + FY C RLRCFPQPP+RNW GHLG+ NE
Sbjct: 21 VYALSGLLLSLLFFLFRLLLQFLRFCWCFYITCRRLRCFPQPPRRNWLLGHLGMYLPNEM 80
Query: 255 GMRLVEDLGHCFRDVHLWWLGPLYPVLRLVHPNFVAPLLQAPATIIPKDMLFYSFLKPWL 434
G+R + + V L W+GP+ P+L LVHP+++ P++ A A I PKD LFY FLKPWL
Sbjct: 81 GLRAEKKVLDNMHHVILVWIGPVLPLLVLVHPDYIKPVVGASAAIAPKDDLFYGFLKPWL 140
Query: 435 GVGLLLSAGEKWSHQRRLLTPAFHFDILKSYVKIFNRSADIMHAKWQHLASEGHTRLDMF 614
G GLLLS G+KWS RR+LTPAFHFDILK Y+KIFN+ +IMHAKW+ LA LDMF
Sbjct: 141 GDGLLLSKGDKWSRHRRMLTPAFHFDILKPYMKIFNQCTNIMHAKWRRLAEGSVVSLDMF 200
Query: 615 EHISLMTLDSLQKCVFSFDSNCQEKPSEYIAAISELSALVTKRNEQIFLHKDFLYYLTPE 794
EH+SLMTLDSLQKCVFS++SNCQEK S+YI+AI +LSALV +R ++ LH DF+YY T E
Sbjct: 201 EHVSLMTLDSLQKCVFSYNSNCQEKMSDYISAIIQLSALVVQRQYRLHLHIDFIYYCTAE 260
Query: 795 GRRFRKACRLVHDFTDAVIQERRRTLISQGSQDFLRAKAKAKTLDFIDVLLLAKDEDGKG 974
GRRFRKAC VH FT VIQERRR L QG++ +L+AK + K LDFIDVLLLA+DEDGK
Sbjct: 261 GRRFRKACDTVHRFTTEVIQERRRALRQQGAEAWLKAK-QGKNLDFIDVLLLARDEDGKE 319
Query: 975 LSDEDIRTEADTFMFAGHDTTASGLSWVLYNLXKHPEY 1088
LSDEDIR EADTFMF GHDTT+SGLSWVL+NL K+PEY
Sbjct: 320 LSDEDIRAEADTFMFEGHDTTSSGLSWVLFNLAKYPEY 357
>ref|XP_003354175.1| PREDICTED: leukotriene-B(4) omega-hydroxylase 2-like, partial [Sus
scrofa].
Length = 308
Score = 250 bits (638), Expect = 1e-66
Identities = 126/134 (94%), Positives = 126/134 (94%)
Frame = +3
Query: 687 KPSEYIAAISELSALVTKRNEQIFLHKDFLYYLTPEGRRFRKACRLVHDFTDAVIQERRR 866
KPSEYI AI LSALV KR EQIFLHKDFLYYLTPEGRRFRKACRLVHDFTDAVIQERR
Sbjct: 1 KPSEYITAILALSALVIKRCEQIFLHKDFLYYLTPEGRRFRKACRLVHDFTDAVIQERRC 60
Query: 867 TLISQGSQDFLRAKAKAKTLDFIDVLLLAKDEDGKGLSDEDIRTEADTFMFAGHDTTASG 1046
TLISQGSQDFLRAKAKAKTLDFIDVLLLAKDEDGKGLSDEDIR EADTFMFAGHDTTASG
Sbjct: 61 TLISQGSQDFLRAKAKAKTLDFIDVLLLAKDEDGKGLSDEDIRAEADTFMFAGHDTTASG 120
Query: 1047 LSWVLYNLXKHPEY 1088
LSWVLYNL KHPEY
Sbjct: 121 LSWVLYNLAKHPEY 134
>ref|XP_003128064.2| PREDICTED: cytochrome P450 4A24-like isoform 1 [Sus scrofa].
Length = 504
Score = 233 bits (594), Expect = 1e-61
Identities = 143/343 (41%), Positives = 195/343 (56%), Gaps = 2/343 (0%)
Frame = +3
Query: 66 GLGPVSASPWLLLQLVGATWLLSRILSWIYNFYDNCCRLRCFPQPPKRNWFWGHLGLAKN 245
GL V++ LLL L+ A L R W+ L+ FP PP +W +GH +
Sbjct: 11 GLLQVASLLGLLLLLLKAAQLYLR-RQWLLK------ALQQFPSPPS-HWLYGHSREFQE 62
Query: 246 NEEGMRLVEDLGHCFRDVHLWWLGPLYPVLRLVHPNFVAPLLQAPATIIPKDMLFYSFLK 425
E L++ + LW G VL + P+++ +L A PK + Y +L
Sbjct: 63 ESELPPLLKRVEKYPSACALWRWGTRAMVL-VYDPDYMKVVL---ARSEPKPHITYKYLI 118
Query: 426 PWLGVGLLLSAGEKWSHQRRLLTPAFHFDILKSYVKIFNRSADIMHAKWQHLASEGHTRL 605
PWLG GLLL G+ W RR+LTPAFH DILK YV++ S +M KW+ L ++ RL
Sbjct: 119 PWLGNGLLLLDGQAWFQHRRMLTPAFHHDILKPYVRLMADSVQVMLDKWEQLVAQD-PRL 177
Query: 606 DMFEHISLMTLDSLQKCVFSFDSNCQEKPSE--YIAAISELSALVTKRNEQIFLHKDFLY 779
++ +SLMTLD++ KC FS + Q + YI AI +L+ L+ R +F D +Y
Sbjct: 178 EIVGPVSLMTLDTIMKCAFSHQGSVQTDGNSHSYIQAIRDLNDLLFSRVRNVFQQNDVIY 237
Query: 780 YLTPEGRRFRKACRLVHDFTDAVIQERRRTLISQGSQDFLRAKAKAKTLDFIDVLLLAKD 959
L+PEGRR +AC+L H TD VIQ R+ L QG + +R K + LDF+D+LLLA+
Sbjct: 238 RLSPEGRRSHRACQLAHQHTDRVIQLRKAQLQKQGEMENVRKK---RHLDFLDILLLAQM 294
Query: 960 EDGKGLSDEDIRTEADTFMFAGHDTTASGLSWVLYNLXKHPEY 1088
E G LSD D+R E DTFMF GHDTTASG+SW+LY L HPE+
Sbjct: 295 EKGNSLSDTDLRAEVDTFMFEGHDTTASGISWILYALASHPEH 337
>ref|XP_003127953.1| PREDICTED: cytochrome P450 4A11-like [Sus scrofa].
Length = 510
Score = 233 bits (593), Expect = 2e-61
Identities = 141/346 (40%), Positives = 196/346 (56%), Gaps = 5/346 (1%)
Frame = +3
Query: 66 GLGPVSASPWLLLQLVGATWLLSRILSWIYNFYDNCCRLRCFPQPPKRNWFWGHLG--LA 239
GL V++ LLL L+ AT L W+ L+ FP PP +W +GH L
Sbjct: 17 GLLQVASVFGLLLLLLKATQLYLH-RQWLLK------ALQQFPSPPS-HWLYGHSREHLK 68
Query: 240 KNN-EEGMRLVEDLGHCFRDVHLWWLGPLYPVLRLVHPNFVAPLLQAPATIIPKDMLFYS 416
N+ +E +R V++ F +WL L + P+++ +L PK +
Sbjct: 69 DNDLQEALRRVKN----FPRACPYWLWGNKAHLVIYDPDYMKVVLGRSD---PKLTDVHK 121
Query: 417 FLKPWLGVGLLLSAGEKWSHQRRLLTPAFHFDILKSYVKIFNRSADIMHAKWQHLASEGH 596
FL PW+G GLLLS G+ W RR+LTPAFH+DILK YV + S +M KW+ L ++
Sbjct: 122 FLSPWIGYGLLLSDGQTWFQHRRMLTPAFHYDILKPYVNLMADSVKVMLDKWEQLVTQD- 180
Query: 597 TRLDMFEHISLMTLDSLQKCVFSFDSNCQ--EKPSEYIAAISELSALVTKRNEQIFLHKD 770
+ L++F H+SLMTLD++ KC FS+ + Q YI A+ L++L R D
Sbjct: 181 SHLEIFGHVSLMTLDTVMKCAFSYQGSVQTDRNSHSYIQAVGNLNSLFVARLRSALYQND 240
Query: 771 FLYYLTPEGRRFRKACRLVHDFTDAVIQERRRTLISQGSQDFLRAKAKAKTLDFIDVLLL 950
+Y L+PEGR R+AC+L H TD VI+ R+ L +G + LR K + LDF+D+LL
Sbjct: 241 IIYRLSPEGRLSRQACQLAHQHTDQVIRLRKAHLQKEGEMENLRKK---RHLDFLDILLF 297
Query: 951 AKDEDGKGLSDEDIRTEADTFMFAGHDTTASGLSWVLYNLXKHPEY 1088
A+ E+G LSD D+R E DTFMF GHDTTASG+SW+ Y L HPEY
Sbjct: 298 ARMENGSSLSDTDLRAEVDTFMFEGHDTTASGISWIFYALASHPEY 343
>ref|XP_003128078.2| PREDICTED: cytochrome P450 4A24-like [Sus scrofa].
Length = 504
Score = 232 bits (592), Expect = 2e-61
Identities = 138/333 (41%), Positives = 189/333 (56%), Gaps = 2/333 (0%)
Frame = +3
Query: 96 LLLQLVGATWLLSRILSWIYNFYDNCCRLRCFPQPPKRNWFWGHLGLAKNNEEGMRLVED 275
LLL L A L R W+ L+ FP PP +W +GH + E L++
Sbjct: 22 LLLLLKAAQLYLHR--QWLLK------ALQQFPSPPS-HWLYGHSREFQEEGEQQSLLKR 72
Query: 276 LGHCFRDVHLWWLGPLYPVLRLVHPNFVAPLLQAPATIIPKDMLFYSFLKPWLGVGLLLS 455
+G W G VL + P+++ +L A PK+ + Y L PW+G GLLL
Sbjct: 73 IGKYPSACARWRWGTRALVL-VYDPDYMKVVL---ARSDPKNSVVYRLLIPWIGCGLLLL 128
Query: 456 AGEKWSHQRRLLTPAFHFDILKSYVKIFNRSADIMHAKWQHLASEGHTRLDMFEHISLMT 635
G+ W +RR+LTPAFH+DILK YV + +S +M KW+ L ++ RL++ +SLMT
Sbjct: 129 NGQTWFQRRRMLTPAFHYDILKPYVGLMAKSVQVMLDKWEQLVAQD-PRLEIVGPVSLMT 187
Query: 636 LDSLQKCVFSFDSNCQEKPSE--YIAAISELSALVTKRNEQIFLHKDFLYYLTPEGRRFR 809
LD++ KC FS + Q YI AI +L L + R + FL D +Y L+PEGR+
Sbjct: 188 LDTIMKCAFSHQGSTQTDGDSHSYIQAIWDLKNLFSTRTKSAFLQNDIIYRLSPEGRKSH 247
Query: 810 KACRLVHDFTDAVIQERRRTLISQGSQDFLRAKAKAKTLDFIDVLLLAKDEDGKGLSDED 989
+A R+ H TD VIQ R+ L QG + +R K + LDF+D+LLLA+ E G LSD D
Sbjct: 248 RAARIAHQHTDRVIQLRKAQLQKQGEMENVRKK---RHLDFLDILLLAQMEKGNSLSDTD 304
Query: 990 IRTEADTFMFAGHDTTASGLSWVLYNLXKHPEY 1088
+R E DTFMF GHDTTASG+SW+LY L HPE+
Sbjct: 305 LRAEVDTFMFEGHDTTASGISWILYALASHPEH 337
>ref|XP_003356525.1| PREDICTED: cytochrome P450 4A24-like isoform 2 [Sus scrofa].
Length = 504
Score = 232 bits (591), Expect = 3e-61
Identities = 142/343 (41%), Positives = 195/343 (56%), Gaps = 2/343 (0%)
Frame = +3
Query: 66 GLGPVSASPWLLLQLVGATWLLSRILSWIYNFYDNCCRLRCFPQPPKRNWFWGHLGLAKN 245
GL V++ LLL L+ A L R W+ L+ FP PP +W +GH +
Sbjct: 11 GLLQVASLLGLLLLLLKAAQLYLR-RQWLLK------ALQQFPSPPS-HWLYGHSREFQE 62
Query: 246 NEEGMRLVEDLGHCFRDVHLWWLGPLYPVLRLVHPNFVAPLLQAPATIIPKDMLFYSFLK 425
E L++ + LW G VL + P+++ +L A PK+ + Y L
Sbjct: 63 ESELPPLLKRVEKYPSACALWRWGTRAMVL-VYDPDYMKVVL---ARSDPKNSVVYRLLI 118
Query: 426 PWLGVGLLLSAGEKWSHQRRLLTPAFHFDILKSYVKIFNRSADIMHAKWQHLASEGHTRL 605
PW+G GLLL G+ W RR+LTPAFH DILK YV++ S +M KW+ L ++ RL
Sbjct: 119 PWIGNGLLLLDGQAWFQHRRMLTPAFHHDILKPYVRLMADSVQVMLDKWEQLVAQD-PRL 177
Query: 606 DMFEHISLMTLDSLQKCVFSFDSNCQEKPSE--YIAAISELSALVTKRNEQIFLHKDFLY 779
++ +SLMTLD++ KC FS + Q + YI AI +L+ L+ R +F D +Y
Sbjct: 178 EIVGPVSLMTLDTIMKCAFSHQGSVQTDGNSHSYIQAIRDLNDLLFSRVRNVFQQNDVIY 237
Query: 780 YLTPEGRRFRKACRLVHDFTDAVIQERRRTLISQGSQDFLRAKAKAKTLDFIDVLLLAKD 959
L+PEGRR +AC+L H TD VIQ R+ L QG + +R K + LDF+D+LLLA+
Sbjct: 238 RLSPEGRRSHRACQLAHQHTDRVIQLRKAQLQKQGEMENVRKK---RHLDFLDILLLAQM 294
Query: 960 EDGKGLSDEDIRTEADTFMFAGHDTTASGLSWVLYNLXKHPEY 1088
E G LSD D+R E DTFMF GHDTTASG+SW+LY L HPE+
Sbjct: 295 EKGNSLSDTDLRAEVDTFMFEGHDTTASGISWILYALASHPEH 337
>ref|XP_003356524.1| PREDICTED: cytochrome P450 4A24-like [Sus scrofa].
Length = 504
Score = 228 bits (581), Expect = 4e-60
Identities = 138/343 (40%), Positives = 194/343 (56%), Gaps = 2/343 (0%)
Frame = +3
Query: 66 GLGPVSASPWLLLQLVGATWLLSRILSWIYNFYDNCCRLRCFPQPPKRNWFWGHLGLAKN 245
GL V++ LLL L+ A L R W+ L+ FP PP +W +GH +
Sbjct: 11 GLLQVASLLGLLLLLLKAAQLYLR-RQWLLK------ALQQFPSPPS-HWLYGHSREFQQ 62
Query: 246 NEEGMRLVEDLGHCFRDVHLWWLGPLYPVLRLVHPNFVAPLLQAPATIIPKDMLFYSFLK 425
E L++ + W G VL + P+++ +L A PK+ + Y L
Sbjct: 63 EGEQQSLLKRIEKYPSACARWRWGTRAMVL-VYDPDYMKVVL---ARSDPKNSVVYRLLI 118
Query: 426 PWLGVGLLLSAGEKWSHQRRLLTPAFHFDILKSYVKIFNRSADIMHAKWQHLASEGHTRL 605
PW+G GLLL G+ W +RR+LTPAFH+DILK YV + +S +M KW+ L ++ RL
Sbjct: 119 PWIGCGLLLLNGQTWFQRRRMLTPAFHYDILKPYVGLMAKSVQVMLDKWEQLVAQD-PRL 177
Query: 606 DMFEHISLMTLDSLQKCVFSFDSNCQEKPSE--YIAAISELSALVTKRNEQIFLHKDFLY 779
++ +SLMTLD++ KC FS + Q YI AI +L L + R + FL D +Y
Sbjct: 178 EIVGPVSLMTLDTIMKCAFSHQGSVQTDGDSHSYIQAIWDLKNLFSIRTKSAFLQNDIIY 237
Query: 780 YLTPEGRRFRKACRLVHDFTDAVIQERRRTLISQGSQDFLRAKAKAKTLDFIDVLLLAKD 959
L+PEGR+ +A R+ H TD VIQ ++ + QG + +R K + LDF+D+LLLA+
Sbjct: 238 RLSPEGRKNHRAARIAHQHTDRVIQLKKAQVQKQGEMENVRKK---RHLDFLDILLLARM 294
Query: 960 EDGKGLSDEDIRTEADTFMFAGHDTTASGLSWVLYNLXKHPEY 1088
E G LSD D+R E DTFMF GHDTTASG+SW+LY L HPE+
Sbjct: 295 EKGNSLSDTDLRAEVDTFMFEGHDTTASGISWILYALASHPEH 337
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 31,890,009
Number of extensions: 1026857
Number of successful extensions: 4826
Number of sequences better than 1.0e-05: 20
Number of HSP's gapped: 4772
Number of HSP's successfully gapped: 20
Length of query: 362
Length of database: 11,343,932
Length adjustment: 100
Effective length of query: 262
Effective length of database: 8,854,232
Effective search space: 2319808784
Effective search space used: 2319808784
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002326
(1088 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr02 539 e-150
Sscrofa_Chr06 62 7e-07
>Sscrofa_Chr02
|| Length = 162569375
Score = 539 bits (272), Expect = e-150
Identities = 272/272 (100%)
Strand = Plus / Plus
Query: 686 gaaacccagtgaatacattgctgcaatctccgagctcagtgccctggtgacaaaacggaa 745
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61533613 gaaacccagtgaatacattgctgcaatctccgagctcagtgccctggtgacaaaacggaa 61533672
Query: 746 tgagcagatcttcctgcacaaggacttcctgtactacctcacccccgaagggaggcgctt 805
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61533673 tgagcagatcttcctgcacaaggacttcctgtactacctcacccccgaagggaggcgctt 61533732
Query: 806 ccgcaaggcctgccgcctggtgcacgacttcacagatgccgtcatccaggagcggcgtcg 865
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61533733 ccgcaaggcctgccgcctggtgcacgacttcacagatgccgtcatccaggagcggcgtcg 61533792
Query: 866 caccctcattagtcagggttcccaagacttccttagggccaaggctaaggccaagacttt 925
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61533793 caccctcattagtcagggttcccaagacttccttagggccaaggctaaggccaagacttt 61533852
Query: 926 ggacttcattgatgtgctcctgctggccaagg 957
||||||||||||||||||||||||||||||||
Sbjct: 61533853 ggacttcattgatgtgctcctgctggccaagg 61533884
Score = 531 bits (268), Expect = e-148
Identities = 271/272 (99%)
Strand = Plus / Plus
Query: 686 gaaacccagtgaatacattgctgcaatctccgagctcagtgccctggtgacaaaacggaa 745
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61532136 gaaacccagtgaatacattgctgcaatctccgagctcagtgccctggtgacaaaacggaa 61532195
Query: 746 tgagcagatcttcctgcacaaggacttcctgtactacctcacccccgaagggaggcgctt 805
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61532196 tgagcagatcttcctgcacaaggacttcctgtactacctcacccccgaagggaggcgctt 61532255
Query: 806 ccgcaaggcctgccgcctggtgcacgacttcacagatgccgtcatccaggagcggcgtcg 865
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61532256 ccgcaaggcctgccgcctggtgcacgacttcacagatgccgtcatccaggagcggcgtcg 61532315
Query: 866 caccctcattagtcagggttcccaagacttccttagggccaaggctaaggccaagacttt 925
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 61532316 caccctcattagtcagggttcccaagacttccttagggccaaggctaaggccaaaacttt 61532375
Query: 926 ggacttcattgatgtgctcctgctggccaagg 957
||||||||||||||||||||||||||||||||
Sbjct: 61532376 ggacttcattgatgtgctcctgctggccaagg 61532407
Score = 444 bits (224), Expect = e-122
Identities = 260/272 (95%)
Strand = Plus / Minus
Query: 686 gaaacccagtgaatacattgctgcaatctccgagctcagtgccctggtgacaaaacggaa 745
||||||||||||||| ||| |||| |||| | |||||||||||||||| |||||||
Sbjct: 61503949 gaaacccagtgaatatattactgccatcttagcactcagtgccctggtgataaaacggtg 61503890
Query: 746 tgagcagatcttcctgcacaaggacttcctgtactacctcacccccgaagggaggcgctt 805
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61503889 cgagcagatcttcctgcacaaggacttcctgtactacctcacccccgaagggaggcgctt 61503830
Query: 806 ccgcaaggcctgccgcctggtgcacgacttcacagatgccgtcatccaggagcggcgtcg 865
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 61503829 ccgcaaggcctgccgcctggtgcacgacttcacagatgccgtcatccaggagcggcgttg 61503770
Query: 866 caccctcattagtcagggttcccaagacttccttagggccaaggctaaggccaagacttt 925
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61503769 caccctcattagtcagggttcccaagacttccttagggccaaggctaaggccaagacttt 61503710
Query: 926 ggacttcattgatgtgctcctgctggccaagg 957
||||||||||||||||||||||||||||||||
Sbjct: 61503709 ggacttcattgatgtgctcctgctggccaagg 61503678
Score = 400 bits (202), Expect = e-109
Identities = 202/202 (100%)
Strand = Plus / Plus
Query: 36 aggatgctgcagctgagcctgtcctggctgggactggggcctgtgtcagcctccccgtgg 95
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61441936 aggatgctgcagctgagcctgtcctggctgggactggggcctgtgtcagcctccccgtgg 61441995
Query: 96 ctgcttctgcagctggtcggtgctacctggctcctgtcccgaatcctgtcctggatctat 155
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61441996 ctgcttctgcagctggtcggtgctacctggctcctgtcccgaatcctgtcctggatctat 61442055
Query: 156 aacttctatgacaactgctgccgcctccggtgtttcccgcaacccccaaaacggaactgg 215
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61442056 aacttctatgacaactgctgccgcctccggtgtttcccgcaacccccaaaacggaactgg 61442115
Query: 216 ttttggggtcacctgggcctgg 237
||||||||||||||||||||||
Sbjct: 61442116 ttttggggtcacctgggcctgg 61442137
Score = 369 bits (186), Expect = 2e-99
Identities = 198/202 (98%)
Strand = Plus / Plus
Query: 36 aggatgctgcagctgagcctgtcctggctgggactggggcctgtgtcagcctccccgtgg 95
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61637437 aggatgctgcagctgagcctgtcctggctgggactggggcctgtgtcagcctccccgtgg 61637496
Query: 96 ctgcttctgcagctggtcggtgctacctggctcctgtcccgaatcctgtcctggatctat 155
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61637497 ctgctcctgcagctggtcggtgctacctggctcctgtcccgaatcctgtcctggatctat 61637556
Query: 156 aacttctatgacaactgctgccgcctccggtgtttcccgcaacccccaaaacggaactgg 215
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61637557 gacttctatgacaactgctgccgcctccggtgtttcccgcaacccccaaaacggaactgg 61637616
Query: 216 ttttggggtcacctgggcctgg 237
||||||||||||| || |||||
Sbjct: 61637617 ttttggggtcaccaggacctgg 61637638
Score = 349 bits (176), Expect = 2e-93
Identities = 188/192 (97%)
Strand = Plus / Minus
Query: 36 aggatgctgcagctgagcctgtcctggctgggactggggcctgtgtcagcctccccgtgg 95
|||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 61555626 aggatgttgcagctgagcctgtcctggctaggactggggcctgtgtcagcctccccgtgg 61555567
Query: 96 ctgcttctgcagctggtcggtgctacctggctcctgtcccgaatcctgtcctggatctat 155
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61555566 ctgctcctgcagctggtcggtgctacctggctcctgtcccgaatcctgtcctggatctat 61555507
Query: 156 aacttctatgacaactgctgccgcctccggtgtttcccgcaacccccaaaacggaactgg 215
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61555506 gacttctatgacaactgctgccgcctccggtgtttcccgcaacccccaaaacggaactgg 61555447
Query: 216 ttttggggtcac 227
||||||||||||
Sbjct: 61555446 ttttggggtcac 61555435
Score = 289 bits (146), Expect = 2e-75
Identities = 146/146 (100%)
Strand = Plus / Plus
Query: 236 ggcgaagaacaatgaagagggcatgcggctggtagaagatctcggccactgcttccgcga 295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61447453 ggcgaagaacaatgaagagggcatgcggctggtagaagatctcggccactgcttccgcga 61447512
Query: 296 cgtccatctctggtggctagggcccttgtaccccgtcctgcggcttgtccaccccaactt 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61447513 cgtccatctctggtggctagggcccttgtaccccgtcctgcggcttgtccaccccaactt 61447572
Query: 356 tgttgctcccctgctccaggccccag 381
||||||||||||||||||||||||||
Sbjct: 61447573 tgttgctcccctgctccaggccccag 61447598
Score = 289 bits (146), Expect = 2e-75
Identities = 242/269 (89%), Gaps = 4/269 (1%)
Strand = Plus / Minus
Query: 686 gaaacccagtgaatacattgctgcaatctccgagctcagtgccctggtgacaaaacggaa 745
||||||||||||||| ||| |||| |||| | |||||||||||||||| ||| |||
Sbjct: 61538110 gaaacccagtgaatatattactgccatcttagcactcagtgccctggtgataaa-cggtg 61538052
Query: 746 tgagcagatcttcctgcacaaggacttcctgtactacctcacccccgaagggaggcgctt 805
||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||
Sbjct: 61538051 cgagcagatcttcctgcacanggacttcctgtactacctcacccccgaaggggagcgctt 61537992
Query: 806 ccgcaaggcctgccgcctggtgcacgacttcacagatgccgtcatccaggagc-ggcgtc 864
|| |||||||| ||||||||||| ||||||||||||||||||||||||||| |||||
Sbjct: 61537991 cccgcaggcctgcggcctggtgcacaacttcacagatgccgtcatccaggagcgggcgt- 61537933
Query: 865 gcaccctcattagtcagggttcccaagacttccttagggccaaggctaaggccaagactt 924
||||||||||||||||||| ||||||||||| | |||||||| |||| ||||||||||||
Sbjct: 61537932 gcaccctcattagtcaggggtcccaagactttcctagggccagggct-aggccaagactt 61537874
Query: 925 tggacttcattgatgtgctcctgctggcc 953
|||||||||||||||||||||||||||||
Sbjct: 61537873 tggacttcattgatgtgctcctgctggcc 61537845
Score = 281 bits (142), Expect = 4e-73
Identities = 145/146 (99%)
Strand = Plus / Plus
Query: 236 ggcgaagaacaatgaagagggcatgcggctggtagaagatctcggccactgcttccgcga 295
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 61468895 ggcgaagaacaatgaagagggcatgcggctggtagaagatctcagccactgcttccgcga 61468954
Query: 296 cgtccatctctggtggctagggcccttgtaccccgtcctgcggcttgtccaccccaactt 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61468955 cgtccatctctggtggctagggcccttgtaccccgtcctgcggcttgtccaccccaactt 61469014
Query: 356 tgttgctcccctgctccaggccccag 381
||||||||||||||||||||||||||
Sbjct: 61469015 tgttgctcccctgctccaggccccag 61469040
Score = 258 bits (130), Expect = 6e-66
Identities = 130/130 (100%)
Strand = Plus / Plus
Query: 435 ggggttgggctcctgctgagtgctggtgagaagtggagccaccagcgccgcctgctgaca 494
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61470792 ggggttgggctcctgctgagtgctggtgagaagtggagccaccagcgccgcctgctgaca 61470851
Query: 495 cctgccttccactttgatatcttgaagtcatatgtgaagattttcaacaggagtgcagac 554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61470852 cctgccttccactttgatatcttgaagtcatatgtgaagattttcaacaggagtgcagac 61470911
Query: 555 atcatgcatg 564
||||||||||
Sbjct: 61470912 atcatgcatg 61470921
Score = 258 bits (130), Expect = 6e-66
Identities = 130/130 (100%)
Strand = Plus / Minus
Query: 435 ggggttgggctcctgctgagtgctggtgagaagtggagccaccagcgccgcctgctgaca 494
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61548131 ggggttgggctcctgctgagtgctggtgagaagtggagccaccagcgccgcctgctgaca 61548072
Query: 495 cctgccttccactttgatatcttgaagtcatatgtgaagattttcaacaggagtgcagac 554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61548071 cctgccttccactttgatatcttgaagtcatatgtgaagattttcaacaggagtgcagac 61548012
Query: 555 atcatgcatg 564
||||||||||
Sbjct: 61548011 atcatgcatg 61548002
Score = 258 bits (130), Expect = 6e-66
Identities = 130/130 (100%)
Strand = Plus / Plus
Query: 435 ggggttgggctcctgctgagtgctggtgagaagtggagccaccagcgccgcctgctgaca 494
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61645719 ggggttgggctcctgctgagtgctggtgagaagtggagccaccagcgccgcctgctgaca 61645778
Query: 495 cctgccttccactttgatatcttgaagtcatatgtgaagattttcaacaggagtgcagac 554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61645779 cctgccttccactttgatatcttgaagtcatatgtgaagattttcaacaggagtgcagac 61645838
Query: 555 atcatgcatg 564
||||||||||
Sbjct: 61645839 atcatgcatg 61645848
Score = 244 bits (123), Expect = 8e-62
Identities = 123/123 (100%)
Strand = Plus / Plus
Query: 564 gccaagtggcagcacttggcctcagagggccacacccgtctggacatgtttgaacacatc 623
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61531272 gccaagtggcagcacttggcctcagagggccacacccgtctggacatgtttgaacacatc 61531331
Query: 624 agcctcatgactctggacagtctgcagaaatgtgtcttcagttttgacagcaactgccag 683
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61531332 agcctcatgactctggacagtctgcagaaatgtgtcttcagttttgacagcaactgccag 61531391
Query: 684 gag 686
|||
Sbjct: 61531392 gag 61531394
Score = 244 bits (123), Expect = 8e-62
Identities = 123/123 (100%)
Strand = Plus / Plus
Query: 564 gccaagtggcagcacttggcctcagagggccacacccgtctggacatgtttgaacacatc 623
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61647676 gccaagtggcagcacttggcctcagagggccacacccgtctggacatgtttgaacacatc 61647735
Query: 624 agcctcatgactctggacagtctgcagaaatgtgtcttcagttttgacagcaactgccag 683
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61647736 agcctcatgactctggacagtctgcagaaatgtgtcttcagttttgacagcaactgccag 61647795
Query: 684 gag 686
|||
Sbjct: 61647796 gag 61647798
Score = 228 bits (115), Expect = 5e-57
Identities = 121/123 (98%)
Strand = Plus / Minus
Query: 564 gccaagtggcagcacttggcctcagagggccacacccgtctggacatgtttgaacacatc 623
||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 61478976 gccaagtggcagcgcttggcctcagaaggccacacccgtctggacatgtttgaacacatc 61478917
Query: 624 agcctcatgactctggacagtctgcagaaatgtgtcttcagttttgacagcaactgccag 683
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61478916 agcctcatgactctggacagtctgcagaaatgtgtcttcagttttgacagcaactgccag 61478857
Query: 684 gag 686
|||
Sbjct: 61478856 gag 61478854
Score = 220 bits (111), Expect = 1e-54
Identities = 120/123 (97%)
Strand = Plus / Minus
Query: 564 gccaagtggcagcacttggcctcagagggccacacccgtctggacatgtttgaacacatc 623
||||||||||||| |||||||||||| ||||||||||||||||| |||||||||||||||
Sbjct: 61538974 gccaagtggcagcgcttggcctcagaaggccacacccgtctggagatgtttgaacacatc 61538915
Query: 624 agcctcatgactctggacagtctgcagaaatgtgtcttcagttttgacagcaactgccag 683
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61538914 agcctcatgactctggacagtctgcagaaatgtgtcttcagttttgacagcaactgccag 61538855
Query: 684 gag 686
|||
Sbjct: 61538854 gag 61538852
Score = 200 bits (101), Expect = 1e-48
Identities = 224/265 (84%)
Strand = Plus / Minus
Query: 693 agtgaatacattgctgcaatctccgagctcagtgccctggtgacaaaacggaatgagcag 752
|||||||| |||||||| |||| ||||||||||| || ||| |||||||| | |||||
Sbjct: 61350281 agtgaatatattgctgccatcttggagctcagtgctcttgtggcaaaacggcaccagcag 61350222
Query: 753 atcttcctgcacaaggacttcctgtactacctcacccccgaagggaggcgcttccgcaag 812
|||||||||||| |||||||||||||||||||||||| || ||| ||||||||| |||
Sbjct: 61350221 atcttcctgcacctggacttcctgtactacctcacccctgatgggtggcgcttccataag 61350162
Query: 813 gcctgccgcctggtgcacgacttcacagatgccgtcatccaggagcggcgtcgcaccctc 872
||||||||||| || ||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 61350161 gcctgccgcctagttcacgacttcacagatgccgtcatccaggagcggcgcaacaccctt 61350102
Query: 873 attagtcagggttcccaagacttccttagggccaaggctaaggccaagactttggacttc 932
| |||| | |||||||| | ||||||||||||||| || ||||||||| ||
Sbjct: 61350101 cccacagagggcattgatgacttcctcaaggccaaggctaaggctaaaactttggacatc 61350042
Query: 933 attgatgtgctcctgctggccaagg 957
|||||||||||||||||| ||||||
Sbjct: 61350041 attgatgtgctcctgctgaccaagg 61350017
Score = 196 bits (99), Expect = 2e-47
Identities = 115/121 (95%)
Strand = Plus / Minus
Query: 566 caagtggcagcacttggcctcagagggccacacccgtctggacatgtttgaacacatcag 625
||||||||||| |||||||||||| || |||||||||||||| |||||||||||||||||
Sbjct: 61540305 caagtggcagcgcttggcctcagaaggncacacccgtctggagatgtttgaacacatcag 61540246
Query: 626 cctcatgactctggacagtctgcagaaatgtgtcttcagttttgacagcaactgccagga 685
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 61540245 cctcatgactctggacagtctgcagaaatgtgtcttcagttttgacagncactgccagga 61540186
Query: 686 g 686
|
Sbjct: 61540185 g 61540185
Score = 157 bits (79), Expect = 2e-35
Identities = 109/119 (91%)
Strand = Plus / Minus
Query: 564 gccaagtggcagcacttggcctcagagggccacacccgtctggacatgtttgaacacatc 623
||||||||||||| ||| | |||||||||||| |||| ||||||||||||||||||||
Sbjct: 61351175 gccaagtggcagcgtctggtcacagagggccacaaccgtttggacatgtttgaacacatc 61351116
Query: 624 agcctcatgactctggacagtctgcagaaatgtgtcttcagttttgacagcaactgcca 682
||||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 61351115 agcctcatgaccctggacagtctgcagaaatgtgtcttcagctttgacagcaattgcca 61351057
Score = 155 bits (78), Expect = 6e-35
Identities = 129/146 (88%)
Strand = Plus / Plus
Query: 236 ggcgaagaacaatgaagagggcatgcggctggtagaagatctcggccactgcttccgcga 295
|||||||| |||||||||| | ||| |||| | |||||| | ||||||| ||||| |||
Sbjct: 61643534 ggcgaagagcaatgaagagtgtttgcagctgatggaagatgtgggccactacttccacga 61643593
Query: 296 cgtccatctctggtggctagggcccttgtaccccgtcctgcggcttgtccaccccaactt 355
||| | |||||||||||||||||||| || ||| |||||||||||||||||||||||||
Sbjct: 61643594 tgtctacctctggtggctagggcccttctatcccatcctgcggcttgtccaccccaactt 61643653
Query: 356 tgttgctcccctgctccaggccccag 381
||||||||||||||||||||||||||
Sbjct: 61643654 tgttgctcccctgctccaggccccag 61643679
Score = 139 bits (70), Expect = 4e-30
Identities = 127/146 (86%)
Strand = Plus / Minus
Query: 236 ggcgaagaacaatgaagagggcatgcggctggtagaagatctcggccactgcttccgcga 295
|||||||| ||||||||||||| ||| |||| ||||||| | |||| || || | ||
Sbjct: 61550028 ggcgaagagcaatgaagagggcttgcagctgatagaagacatgggccgcttattttgtga 61549969
Query: 296 cgtccatctctggtggctagggcccttgtaccccgtcctgcggcttgtccaccccaactt 355
||| | |||||||||||||||||||| || ||| |||||||||||||||||||||||||
Sbjct: 61549968 tgtctacctctggtggctagggcccttctatcccatcctgcggcttgtccaccccaactt 61549909
Query: 356 tgttgctcccctgctccaggccccag 381
||||||||||||||||||||||||||
Sbjct: 61549908 tgttgctcccctgctccaggccccag 61549883
Score = 137 bits (69), Expect = 1e-29
Identities = 99/104 (95%), Gaps = 4/104 (3%)
Strand = Plus / Plus
Query: 564 gccaagtggcagcacttggcctcagagggccacacccgtctggacatgtttgaacacatc 623
|||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||
Sbjct: 61478053 gccaagtggcagcacttggcctcagagggccacacccgtctggacatgttng-acacatc 61478111
Query: 624 agcctcatgactctggacagtctgcagaaatgtgtcttcagttt 667
|| ||||||||||||||| |||||||| ||||||||||||||||
Sbjct: 61478112 ag-ctcatgactctggac-gtctgcag-aatgtgtcttcagttt 61478152
Score = 125 bits (63), Expect = 5e-26
Identities = 65/66 (98%)
Strand = Plus / Minus
Query: 1023 ggccatgacaccaccgccagtggcctctcctgggtcctgtacaacctgncaaagcatccg 1082
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 61503060 ggccatgacaccaccgccagtggcctctcctgggtcctgtacaacctggcaaagcatccg 61503001
Query: 1083 gagtac 1088
||||||
Sbjct: 61503000 gagtac 61502995
Score = 125 bits (63), Expect = 5e-26
Identities = 65/66 (98%)
Strand = Plus / Plus
Query: 1023 ggccatgacaccaccgccagtggcctctcctgggtcctgtacaacctgncaaagcatccg 1082
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 61534502 ggccatgacaccaccgccagtggcctctcctgggtcctgtacaacctggcaaagcatccg 61534561
Query: 1083 gagtac 1088
||||||
Sbjct: 61534562 gagtac 61534567
Score = 123 bits (62), Expect = 2e-25
Identities = 68/70 (97%)
Strand = Plus / Minus
Query: 955 aggatgaagacgggaaaggactgtcagatgaggacatccgaaccgaagctgacaccttca 1014
||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||
Sbjct: 61503338 aggatgaagacgggaaaggactgtcagatgaggacatccgagccgaggctgacaccttca 61503279
Query: 1015 tgtttgcggg 1024
||||||||||
Sbjct: 61503278 tgtttgcggg 61503269
Score = 115 bits (58), Expect = 5e-23
Identities = 58/58 (100%)
Strand = Plus / Plus
Query: 379 cagccaccatcatacccaaggatatgcttttctacagcttcctgaagccctggctggg 436
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61470640 cagccaccatcatacccaaggatatgcttttctacagcttcctgaagccctggctggg 61470697
Score = 115 bits (58), Expect = 5e-23
Identities = 67/70 (95%)
Strand = Plus / Plus
Query: 955 aggatgaagacgggaaaggactgtcagatgaggacatccgaaccgaagctgacaccttca 1014
||||||||||||||||||||||||||||||||||||||| | |||| |||||||||||||
Sbjct: 61534224 aggatgaagacgggaaaggactgtcagatgaggacatccaagccgaggctgacaccttca 61534283
Query: 1015 tgtttgcggg 1024
||||||||||
Sbjct: 61534284 tgtttgcggg 61534293
Score = 115 bits (58), Expect = 5e-23
Identities = 58/58 (100%)
Strand = Plus / Minus
Query: 379 cagccaccatcatacccaaggatatgcttttctacagcttcctgaagccctggctggg 436
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61548283 cagccaccatcatacccaaggatatgcttttctacagcttcctgaagccctggctggg 61548226
Score = 97.6 bits (49), Expect = 1e-17
Identities = 54/56 (96%)
Strand = Plus / Minus
Query: 1023 ggccatgacaccaccgccagtggcctctcctgggtcctgtacaacctgncaaagca 1078
|||||||||||||| ||||||||||||||||||||||||||||||||| |||||||
Sbjct: 61349226 ggccatgacaccacagccagtggcctctcctgggtcctgtacaacctggcaaagca 61349171
Score = 95.6 bits (48), Expect = 5e-17
Identities = 93/108 (86%)
Strand = Plus / Minus
Query: 36 aggatgctgcagctgagcctgtcctggctgggactggggcctgtgtcagcctccccgtgg 95
|||||||||||||||||||| |||||||||||||||||||| ||| |||||| || |||
Sbjct: 61358718 aggatgctgcagctgagcctatcctggctgggactggggccagtggaagcctcaccatgg 61358659
Query: 96 ctgcttctgcagctggtcggtgctacctggctcctgtcccgaatcctg 143
|| || |||| ||||| || ||| ||||||||||| ||||| |||||
Sbjct: 61358658 ctactcctgctcctggttggggcttcctggctcctggcccgagtcctg 61358611
Score = 93.7 bits (47), Expect = 2e-16
Identities = 92/107 (85%)
Strand = Plus / Minus
Query: 435 ggggttgggctcctgctgagtgctggtgagaagtggagccaccagcgccgcctgctgaca 494
|||| |||||||||||||||||||||||| ||||||||| ||| || ||| ||||||||
Sbjct: 61353387 ggggatgggctcctgctgagtgctggtgacaagtggagcagccaccgtcgcatgctgaca 61353328
Query: 495 cctgccttccactttgatatcttgaagtcatatgtgaagattttcaa 541
|||||||||||||| | ||| ||||| | || |||||||||||||
Sbjct: 61353327 cctgccttccacttcaacatcctgaagccctacatgaagattttcaa 61353281
Score = 83.8 bits (42), Expect = 2e-13
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 955 aggatgaagacgggaaaggactgtcagatgaggacatccgaaccgaagctgacaccttca 1014
|||||||||| ||||| | |||||||||||||||||||||| | || |||||||||||||
Sbjct: 61620784 aggatgaagatgggaaggaactgtcagatgaggacatccgagctgaggctgacaccttca 61620843
Query: 1015 tgtttg 1020
||||||
Sbjct: 61620844 tgtttg 61620849
Score = 83.8 bits (42), Expect = 2e-13
Identities = 54/58 (93%)
Strand = Plus / Plus
Query: 379 cagccaccatcatacccaaggatatgcttttctacagcttcctgaagccctggctggg 436
||||||||||||||| |||||||||| |||| |||| |||||||||||||||||||||
Sbjct: 61645570 cagccaccatcatacacaaggatatgtttttgtacatcttcctgaagccctggctggg 61645627
Score = 81.8 bits (41), Expect = 7e-13
Identities = 71/81 (87%)
Strand = Plus / Plus
Query: 606 gacatgtttgaacacatcagcctcatgactctggacagtctgcagaaatgtgtcttcagt 665
||||||||||| || ||||||||||||| ||||||||||| |||||||||||||||||
Sbjct: 61616344 gacatgtttgagcatgtcagcctcatgaccctggacagtcttcagaaatgtgtcttcagc 61616403
Query: 666 tttgacagcaactgccaggag 686
| | |||||||||||||||
Sbjct: 61616404 tacaatagcaactgccaggag 61616424
Score = 75.8 bits (38), Expect = 4e-11
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 955 aggatgaagacgggaaaggactgtcagatgaggacatccgaaccgaagctgacaccttca 1014
|||||||||| ||||| ||| |||||||||| || |||||| | ||||||||||||||||
Sbjct: 61349448 aggatgaagatgggaagggattgtcagatgaagatatccgagctgaagctgacaccttca 61349389
Query: 1015 tgtttg 1020
||||||
Sbjct: 61349388 tgtttg 61349383
Score = 75.8 bits (38), Expect = 4e-11
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 1 gaagaagctgtgtgggactagttgctccagacagaagg 38
||||||||||||||||||||||||||||||||||||||
Sbjct: 61441552 gaagaagctgtgtgggactagttgctccagacagaagg 61441589
Score = 75.8 bits (38), Expect = 4e-11
Identities = 38/38 (100%)
Strand = Plus / Minus
Query: 1 gaagaagctgtgtgggactagttgctccagacagaagg 38
||||||||||||||||||||||||||||||||||||||
Sbjct: 61448199 gaagaagctgtgtgggactagttgctccagacagaagg 61448162
Score = 75.8 bits (38), Expect = 4e-11
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 1 gaagaagctgtgtgggactagttgctccagacagaagg 38
||||||||||||||||||||||||||||||||||||||
Sbjct: 61637070 gaagaagctgtgtgggactagttgctccagacagaagg 61637107
>Sscrofa_Chr06
|| Length = 157765593
Score = 61.9 bits (31), Expect = 7e-07
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 1005 gacaccttcatgtttgcgggccatgacaccaccgccagtggcctctcctgg 1055
||||| |||||||||| ||||||||||||||| |||||||| ||||||||
Sbjct: 152214674 gacacgttcatgtttgaaggccatgacaccaccaccagtggcatctcctgg 152214624
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 29,373,975
Number of extensions: 246
Number of successful extensions: 246
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 243
Number of HSP's successfully gapped: 40
Length of query: 1088
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 1067
Effective length of database: 2,808,413,156
Effective search space: 2996576837452
Effective search space used: 2996576837452
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)