Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002332
(1436 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001103543.1| probable tRNA pseudouridine synthase 2 [Bos ... 261 8e-70
>ref|NP_001103543.1| probable tRNA pseudouridine synthase 2 [Bos taurus].
Length = 164
Score = 261 bits (668), Expect = 8e-70
Identities = 133/163 (81%), Positives = 138/163 (84%)
Frame = +1
Query: 232 MGSAGLARLHGLFAAYKPPGLKWKHLRDTVELQLLKGLNAGKPPAPEQRVRFLLGPVEGS 411
MGSAGLARL GLFA YKPPGLKWKHLRDTVELQLLKGLNAGKPPAP+QRVRFLLGPVEGS
Sbjct: 1 MGSAGLARLQGLFAVYKPPGLKWKHLRDTVELQLLKGLNAGKPPAPKQRVRFLLGPVEGS 60
Query: 412 EEKELTLTATTVPSLINHPLVRGPAFTSLKVGVGHRLDAQASXXXXXXXXXXXXXXTDMY 591
EEKELTLTAT VP+LI+HPLVRG AFTSLKVGVGHRLD+QAS TDMY
Sbjct: 61 EEKELTLTATCVPTLIDHPLVRGLAFTSLKVGVGHRLDSQASGVLVLGVGHGRRLLTDMY 120
Query: 592 NAHLTKDYTVRGLLGKATDDFCEDGRLVEKTTFDHVTREKLDR 720
NAHLTKDYTVRGLLGKATDDFCEDGRLVEKTT+ V L R
Sbjct: 121 NAHLTKDYTVRGLLGKATDDFCEDGRLVEKTTYGSVAFACLTR 163
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 55,630,007
Number of extensions: 2222321
Number of successful extensions: 11004
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 10855
Number of HSP's successfully gapped: 1
Length of query: 478
Length of database: 17,681,374
Length adjustment: 106
Effective length of query: 372
Effective length of database: 14,174,046
Effective search space: 5272745112
Effective search space used: 5272745112
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002332
(1436 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_850756.1| PREDICTED: similar to TruB pseudouridine (psi) ... 520 e-147
Alignment gi|XP_862213.1| PREDICTED: similar to TruB pseudouridine (psi) ... 183 4e-46
Alignment gi|XP_544030.2| PREDICTED: similar to TruB pseudouridine (psi) ... 86 1e-16
>ref|XP_850756.1| PREDICTED: similar to TruB pseudouridine (psi) synthase homolog 2
isoform 1 [Canis familiaris].
Length = 317
Score = 520 bits (1340), Expect = e-147
Identities = 258/301 (85%), Positives = 274/301 (91%)
Frame = +1
Query: 232 MGSAGLARLHGLFAAYKPPGLKWKHLRDTVELQLLKGLNAGKPPAPEQRVRFLLGPVEGS 411
MGS LARL GLFA YKPPGLKWKHLRDTVELQLLKG+NAGKPPAPEQRVRFLLGPV
Sbjct: 1 MGSCALARLQGLFAVYKPPGLKWKHLRDTVELQLLKGVNAGKPPAPEQRVRFLLGPVGSD 60
Query: 412 EEKELTLTATTVPSLINHPLVRGPAFTSLKVGVGHRLDAQASXXXXXXXXXXXXXXTDMY 591
EEKELTLTAT+VP+L NHPLV GPAFTSLKVGVGHRLDAQAS T MY
Sbjct: 61 EEKELTLTATSVPTLTNHPLVCGPAFTSLKVGVGHRLDAQASGVLVLGVGHGRRLLTSMY 120
Query: 592 NAHLTKDYTVRGLLGKATDDFCEDGRLVEKTTFDHVTREKLDRILALIQGSHQKALVMYS 771
NAHLTKDYT+RGLLGKATDDFCEDG+LVEK+T+DHVTREKLDRILALIQGSHQKALVMYS
Sbjct: 121 NAHLTKDYTIRGLLGKATDDFCEDGQLVEKSTYDHVTREKLDRILALIQGSHQKALVMYS 180
Query: 772 NLDLQTQEAYEMAVSGVIRPMNKSPMLITGIRCLQFAPPEFLLEVQCMHETQKQLRRLVH 951
NLDLQTQEAY+MAV G+IRPM+KSPML+TGIRCL FAPPEFL+EVQCMHETQKQLRRLVH
Sbjct: 181 NLDLQTQEAYDMAVRGLIRPMDKSPMLVTGIRCLYFAPPEFLMEVQCMHETQKQLRRLVH 240
Query: 952 EIGLELKSSAVCTQVRRTRDGFFTLDDALLRTQWDLHSIQDAIQAAVPRVAAELEKSLRP 1131
EIGLELK++AVC+QVRRTRDGFFTLDDALLRTQWDLHSIQDAIQAA PRVAA+LEKSLRP
Sbjct: 241 EIGLELKTTAVCSQVRRTRDGFFTLDDALLRTQWDLHSIQDAIQAAAPRVAAQLEKSLRP 300
Query: 1132 G 1134
G
Sbjct: 301 G 301
>ref|XP_862213.1| PREDICTED: similar to TruB pseudouridine (psi) synthase homolog 2
isoform 2 [Canis familiaris].
Length = 107
Score = 183 bits (464), Expect = 4e-46
Identities = 90/102 (88%), Positives = 93/102 (91%)
Frame = +1
Query: 232 MGSAGLARLHGLFAAYKPPGLKWKHLRDTVELQLLKGLNAGKPPAPEQRVRFLLGPVEGS 411
MGS LARL GLFA YKPPGLKWKHLRDTVELQLLKG+NAGKPPAPEQRVRFLLGPV
Sbjct: 1 MGSCALARLQGLFAVYKPPGLKWKHLRDTVELQLLKGVNAGKPPAPEQRVRFLLGPVGSD 60
Query: 412 EEKELTLTATTVPSLINHPLVRGPAFTSLKVGVGHRLDAQAS 537
EEKELTLTAT+VP+L NHPLV GPAFTSLKVGVGHRLDAQAS
Sbjct: 61 EEKELTLTATSVPTLTNHPLVCGPAFTSLKVGVGHRLDAQAS 102
>ref|XP_544030.2| PREDICTED: similar to TruB pseudouridine (psi) synthase homolog 1
[Canis familiaris].
Length = 350
Score = 85.5 bits (210), Expect = 1e-16
Identities = 84/310 (27%), Positives = 130/310 (41%), Gaps = 4/310 (1%)
Frame = +1
Query: 196 AAVLRAPDAGSGMGSAG--LARLHGLFAAYKPPGLKWKHLRDTVELQLLKGLNAGKPPAP 369
AA PDA + L L G+FA +KP G L + ++ +LL AG P
Sbjct: 46 AAARTGPDARVSKAALATKLLSLSGVFAVHKPKGPTSAELLNRLKEKLLA--EAGMPSP- 102
Query: 370 EQRVRFLLGPVEGSEEKELTLTATTVPSLINHPLVRGPAFTSLKVGVGHRLDAQASXXXX 549
E ++ K+ TL K+G G LD+ A
Sbjct: 103 -----------EWTKRKKQTL----------------------KIGHGGTLDSAARGVLV 129
Query: 550 XXXXXXXXXXTDMYNAHLTKDYTVRGLLGKATDDFCEDGRLVEKTTFDHVTREKLDRILA 729
T M + +K Y G LGKATD G++ E+ +D +T+E ++ IL
Sbjct: 130 VGIGRGTKMLTGMLSG--SKRYIAIGELGKATDTLDSTGKVTEEKPYDKITQEDIEGILQ 187
Query: 730 LIQGSHQKALVMYSNLDLQTQEAYEMAVSG-VIRPMNKSPMLITGIRCLQFAPPEFLLEV 906
G+ + +YS L Q + G V+ P+ + + +F PP F L+V
Sbjct: 188 KFTGNIMQVPPLYSALKKDGQRLSTLMKRGEVVEAKPARPVTVYSLSLQKFQPPFFTLDV 247
Query: 907 QCMHETQKQLRRLVHEIGLELKSSAVCTQVRRTRDGFFTLDD-ALLRTQWDLHSIQDAIQ 1083
+C +R LV +IG EL S A ++ RT+ G FTL++ AL +W + I +++
Sbjct: 248 EC--GGGFYIRSLVSDIGKELSSCANVLELTRTKQGPFTLEEHALPEDKWTIDDIAQSLE 305
Query: 1084 AAVPRVAAEL 1113
+ AEL
Sbjct: 306 HCSSLLPAEL 315
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 56,246,239
Number of extensions: 1952355
Number of successful extensions: 11591
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 11350
Number of HSP's successfully gapped: 4
Length of query: 478
Length of database: 18,874,504
Length adjustment: 107
Effective length of query: 371
Effective length of database: 15,307,552
Effective search space: 5679101792
Effective search space used: 5679101792
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002332
(1436 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_056494.1| probable tRNA pseudouridine synthase 2 [Homo sa... 545 e-155
Alignment gi|NP_631908.1| probable tRNA pseudouridine synthase 1 [Homo sa... 88 2e-17
>ref|NP_056494.1| probable tRNA pseudouridine synthase 2 [Homo sapiens].
Length = 331
Score = 545 bits (1404), Expect = e-155
Identities = 274/330 (83%), Positives = 292/330 (88%)
Frame = +1
Query: 232 MGSAGLARLHGLFAAYKPPGLKWKHLRDTVELQLLKGLNAGKPPAPEQRVRFLLGPVEGS 411
MGSAGL+RLHGLFA YKPPGLKWKHLRDTVELQLLKGLNA KPPAP+QRVRFLLGP+EGS
Sbjct: 1 MGSAGLSRLHGLFAVYKPPGLKWKHLRDTVELQLLKGLNARKPPAPKQRVRFLLGPMEGS 60
Query: 412 EEKELTLTATTVPSLINHPLVRGPAFTSLKVGVGHRLDAQASXXXXXXXXXXXXXXTDMY 591
EEKELTLTAT+VPS INHPLV GPAF LKVGVGHRLDAQAS TDMY
Sbjct: 61 EEKELTLTATSVPSFINHPLVCGPAFAHLKVGVGHRLDAQASGVLVLGVGHGCRLLTDMY 120
Query: 592 NAHLTKDYTVRGLLGKATDDFCEDGRLVEKTTFDHVTREKLDRILALIQGSHQKALVMYS 771
NAHLTKDYTVRGLLGKATDDF EDGRLVEKTT+DHVTREKLDRILA+IQGSHQKALVMYS
Sbjct: 121 NAHLTKDYTVRGLLGKATDDFREDGRLVEKTTYDHVTREKLDRILAVIQGSHQKALVMYS 180
Query: 772 NLDLQTQEAYEMAVSGVIRPMNKSPMLITGIRCLQFAPPEFLLEVQCMHETQKQLRRLVH 951
NLDL+TQEAYEMAV G+IRPMNKSPMLITGIRCL FAPPEFLLEVQCMHETQK+LR+LVH
Sbjct: 181 NLDLKTQEAYEMAVRGLIRPMNKSPMLITGIRCLYFAPPEFLLEVQCMHETQKELRKLVH 240
Query: 952 EIGLELKSSAVCTQVRRTRDGFFTLDDALLRTQWDLHSIQDAIQAAVPRVAAELEKSLRP 1131
EIGLELK++AVCTQVRRTRDGFFTLD ALLRTQWDL +IQDAI+AA P+VAAELEKSL P
Sbjct: 241 EIGLELKTTAVCTQVRRTRDGFFTLDSALLRTQWDLTNIQDAIRAATPQVAAELEKSLSP 300
Query: 1132 GLATQPLPGPGRSWDSERPSPALGPDSHVG 1221
GL T+ LP PG SWDS+ PS LG + G
Sbjct: 301 GLDTKQLPSPGWSWDSQGPSSTLGLERGAG 330
>ref|NP_631908.1| probable tRNA pseudouridine synthase 1 [Homo sapiens].
Length = 349
Score = 87.8 bits (216), Expect = 2e-17
Identities = 65/209 (31%), Positives = 99/209 (47%), Gaps = 2/209 (0%)
Frame = +1
Query: 493 SLKVGVGHRLDAQASXXXXXXXXXXXXXXTDMYNAHLTKDYTVRGLLGKATDDFCEDGRL 672
+LK+G G LD+ A T M + +K YT G LGKATD GR+
Sbjct: 111 TLKIGHGGTLDSAARGVLVVGIGSGTKMLTSMLSG--SKRYTAIGELGKATDTLDSTGRV 168
Query: 673 VEKTTFDHVTREKLDRILALIQGSHQKALVMYSNLDLQTQEAYEMAVSG-VIRPMNKSPM 849
E+ +D +T+E ++ IL G+ + +YS L Q + G V+ P+
Sbjct: 169 TEEKPYDKITQEDIEGILQKFTGNIMQVPPLYSALKKDGQRLSTLMKRGEVVEAKPARPV 228
Query: 850 LITGIRCLQFAPPEFLLEVQCMHETQKQLRRLVHEIGLELKSSAVCTQVRRTRDGFFTLD 1029
+ I +F PP F L+V+C +R LV +IG EL S A ++ RT+ G FTL+
Sbjct: 229 TVYSISLQKFQPPFFTLDVEC--GGGFYIRSLVSDIGKELSSCANVLELTRTKQGPFTLE 286
Query: 1030 D-ALLRTQWDLHSIQDAIQAAVPRVAAEL 1113
+ AL +W + I +++ AEL
Sbjct: 287 EHALPEDKWTIDDIAQSLEHCSSLFPAEL 315
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 54,825,907
Number of extensions: 1864141
Number of successful extensions: 10249
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 10080
Number of HSP's successfully gapped: 3
Length of query: 478
Length of database: 18,297,164
Length adjustment: 106
Effective length of query: 372
Effective length of database: 14,802,980
Effective search space: 5506708560
Effective search space used: 5506708560
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002332
(1436 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_663495.3| probable tRNA pseudouridine synthase 2 [Mus mus... 514 e-146
Alignment gi|NP_082391.1| probable tRNA pseudouridine synthase 1 isoform ... 91 3e-18
Alignment gi|NP_084115.2| probable tRNA pseudouridine synthase 1 isoform ... 62 9e-10
>ref|NP_663495.3| probable tRNA pseudouridine synthase 2 [Mus musculus].
Length = 331
Score = 514 bits (1323), Expect = e-146
Identities = 258/330 (78%), Positives = 283/330 (85%)
Frame = +1
Query: 232 MGSAGLARLHGLFAAYKPPGLKWKHLRDTVELQLLKGLNAGKPPAPEQRVRFLLGPVEGS 411
MGS+GLARL GLFA YKPPGLKW HLR+TVELQLLKGLNA +PPAP+QRVRFLLGPVEGS
Sbjct: 1 MGSSGLARLQGLFAVYKPPGLKWLHLRETVELQLLKGLNAQQPPAPDQRVRFLLGPVEGS 60
Query: 412 EEKELTLTATTVPSLINHPLVRGPAFTSLKVGVGHRLDAQASXXXXXXXXXXXXXXTDMY 591
EEK+LTL AT VPSL H LVRGPAFT+LK+GVGHRLD QAS TDMY
Sbjct: 61 EEKKLTLRATNVPSLTTHRLVRGPAFTNLKIGVGHRLDVQASGVLVLAVGHGRSLLTDMY 120
Query: 592 NAHLTKDYTVRGLLGKATDDFCEDGRLVEKTTFDHVTREKLDRILALIQGSHQKALVMYS 771
+AHLTKDYTVRGLLGKATD+FCEDGRL+EKTT+DHVTRE+LDRILA+IQGSHQKALVMYS
Sbjct: 121 DAHLTKDYTVRGLLGKATDNFCEDGRLIEKTTYDHVTRERLDRILAVIQGSHQKALVMYS 180
Query: 772 NLDLQTQEAYEMAVSGVIRPMNKSPMLITGIRCLQFAPPEFLLEVQCMHETQKQLRRLVH 951
NLDL++QEAYEMAV GVIRPMNKSPMLI+GIRCL FAPPEFLLEVQCMHETQ+QLR+LVH
Sbjct: 181 NLDLKSQEAYEMAVQGVIRPMNKSPMLISGIRCLHFAPPEFLLEVQCMHETQQQLRKLVH 240
Query: 952 EIGLELKSSAVCTQVRRTRDGFFTLDDALLRTQWDLHSIQDAIQAAVPRVAAELEKSLRP 1131
EIGLELK+SAVCTQVRRTRDGFF LDDALLRTQWDLH+IQDAIQAA PRVAAEL+K+L
Sbjct: 241 EIGLELKTSAVCTQVRRTRDGFFGLDDALLRTQWDLHNIQDAIQAAAPRVAAELQKNLSL 300
Query: 1132 GLATQPLPGPGRSWDSERPSPALGPDSHVG 1221
L LP G+ W + PS L +S G
Sbjct: 301 KLGHHQLPSTGQPWGLKDPSSTLELESCSG 330
>ref|NP_082391.1| probable tRNA pseudouridine synthase 1 isoform 1 [Mus musculus].
Length = 338
Score = 90.5 bits (223), Expect = 3e-18
Identities = 84/294 (28%), Positives = 127/294 (43%), Gaps = 2/294 (0%)
Frame = +1
Query: 238 SAGLARLHGLFAAYKPPGLKWKHLRDTVELQLLKGLNAGKPPAPEQRVRFLLGPVEGSEE 417
+A L L G+FA +KP G L + ++ +LL AG P +PE R +
Sbjct: 50 AAKLMSLSGVFAVHKPKGPTSAELLNRLKEKLLA--EAGMP-SPEWNKR----------Q 96
Query: 418 KELTLTATTVPSLINHPLVRGPAFTSLKVGVGHRLDAQASXXXXXXXXXXXXXXTDMYNA 597
K+ +LKVG G LD+ A T M +
Sbjct: 97 KQ-----------------------TLKVGHGGTLDSAAQGVLVVGIGRGTKMLTSMLSG 133
Query: 598 HLTKDYTVRGLLGKATDDFCEDGRLVEKTTFDHVTREKLDRILALIQGSHQKALVMYSNL 777
+K Y G LGKATD G++ E+ +D +TRE ++ IL G+ + +YS L
Sbjct: 134 --SKRYITIGELGKATDTLDSTGKVTEEKPYDKITREDIEGILQKFTGNIMQVPPLYSAL 191
Query: 778 DLQTQEAYEMAVSG-VIRPMNKSPMLITGIRCLQFAPPEFLLEVQCMHETQKQLRRLVHE 954
Q + G V+ P+ + I L+F PP F L+V+C +R LV +
Sbjct: 192 KKDGQRLSTLMKKGKVVEARPARPVTVHSISLLKFQPPFFTLDVEC--GGGFYIRSLVSD 249
Query: 955 IGLELKSSAVCTQVRRTRDGFFTL-DDALLRTQWDLHSIQDAIQAAVPRVAAEL 1113
IG EL S A ++ RT+ G FTL AL +W + I+ +++ + EL
Sbjct: 250 IGKELSSCASVLELTRTKQGPFTLAQHALPEDRWTIDDIEQSLERCTSLLPEEL 303
>ref|NP_084115.2| probable tRNA pseudouridine synthase 1 isoform 2 [Mus musculus].
Length = 247
Score = 62.4 bits (150), Expect = 9e-10
Identities = 62/227 (27%), Positives = 92/227 (40%), Gaps = 1/227 (0%)
Frame = +1
Query: 238 SAGLARLHGLFAAYKPPGLKWKHLRDTVELQLLKGLNAGKPPAPEQRVRFLLGPVEGSEE 417
+A L L G+FA +KP G L + ++ +LL AG P +PE R +
Sbjct: 50 AAKLMSLSGVFAVHKPKGPTSAELLNRLKEKLLA--EAGMP-SPEWNKR----------Q 96
Query: 418 KELTLTATTVPSLINHPLVRGPAFTSLKVGVGHRLDAQASXXXXXXXXXXXXXXTDMYNA 597
K+ +LKVG G LD+ A T M +
Sbjct: 97 KQ-----------------------TLKVGHGGTLDSAAQGVLVVGIGRGTKMLTSMLSG 133
Query: 598 HLTKDYTVRGLLGKATDDFCEDGRLVEKTTFDHVTREKLDRILALIQGSHQKALVMYSNL 777
+K Y G LGKATD G++ E+ +D +TRE ++ IL G+ + +YS L
Sbjct: 134 --SKRYITIGELGKATDTLDSTGKVTEEKPYDKITREDIEGILQKFTGNIMQVPPLYSAL 191
Query: 778 DLQTQEAYEMAVSG-VIRPMNKSPMLITGIRCLQFAPPEFLLEVQCM 915
Q + G V+ P+ + I L+F PP F L C+
Sbjct: 192 KKDGQRLSTLMKKGKVVEARPARPVTVHSISLLKFQPPFFTLGFLCI 238
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 45,941,418
Number of extensions: 1527813
Number of successful extensions: 7857
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 7707
Number of HSP's successfully gapped: 5
Length of query: 478
Length of database: 15,617,559
Length adjustment: 105
Effective length of query: 373
Effective length of database: 12,463,779
Effective search space: 4648989567
Effective search space used: 4648989567
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002332
(1436 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_001928454.2| PREDICTED: probable tRNA pseudouridine synth... 665 0.0
Alignment gi|XP_003122248.2| PREDICTED: probable tRNA pseudouridine synth... 473 e-133
Alignment gi|XP_001929431.1| PREDICTED: probable tRNA pseudouridine synth... 80 2e-15
>ref|XP_001928454.2| PREDICTED: probable tRNA pseudouridine synthase 2 [Sus scrofa].
Length = 349
Score = 665 bits (1716), Expect = 0.0
Identities = 333/347 (95%), Positives = 333/347 (95%)
Frame = +1
Query: 184 FPPGAAVLRAPDAGSGMGSAGLARLHGLFAAYKPPGLKWKHLRDTVELQLLKGLNAGKPP 363
FPPGAAVLRAPDAGSGMGSAGLARLHGLFAAYKPPGLKWKHLRDTVELQLLKGLNAGKPP
Sbjct: 3 FPPGAAVLRAPDAGSGMGSAGLARLHGLFAAYKPPGLKWKHLRDTVELQLLKGLNAGKPP 62
Query: 364 APEQRVRFLLGPVEGSEEKELTLTATTVPSLINHPLVRGPAFTSLKVGVGHRLDAQASXX 543
APEQRVRFLLGPVEGSEEKELTLTATTVPSLINHPLVRGPAFTSLKVGVGHRLDAQAS
Sbjct: 63 APEQRVRFLLGPVEGSEEKELTLTATTVPSLINHPLVRGPAFTSLKVGVGHRLDAQASGV 122
Query: 544 XXXXXXXXXXXXTDMYNAHLTKDYTVRGLLGKATDDFCEDGRLVEKTTFDHVTREKLDRI 723
TDMYNAHLTKDYTVRGLLGKATDDFCEDGRLVEKTTFDHVTREKLDRI
Sbjct: 123 LVLGVGHGRRLLTDMYNAHLTKDYTVRGLLGKATDDFCEDGRLVEKTTFDHVTREKLDRI 182
Query: 724 LALIQGSHQKALVMYSNLDLQTQEAYEMAVSGVIRPMNKSPMLITGIRCLQFAPPEFLLE 903
LALIQGSHQKALVMYSNLDLQTQEAYEMAVSGVIRPMNKSPMLITGIRCLQFAPPEFLLE
Sbjct: 183 LALIQGSHQKALVMYSNLDLQTQEAYEMAVSGVIRPMNKSPMLITGIRCLQFAPPEFLLE 242
Query: 904 VQCMHETQKQLRRLVHEIGLELKSSAVCTQVRRTRDGFFTLDDALLRTQWDLHSIQDAIQ 1083
VQCMHETQKQLRRLVHEIGLELKSSAVCTQVRRTRDGFFTLDDALLRTQWDLHSIQDAIQ
Sbjct: 243 VQCMHETQKQLRRLVHEIGLELKSSAVCTQVRRTRDGFFTLDDALLRTQWDLHSIQDAIQ 302
Query: 1084 AAVPRVAAELEKSLRPGLATQPLPGPGRSWDSERPSPALGPDSHVGH 1224
AAVPRVAAELEKSLRPGLATQPLPGPGRSWDSERPSPALGPDSHVGH
Sbjct: 303 AAVPRVAAELEKSLRPGLATQPLPGPGRSWDSERPSPALGPDSHVGH 349
>ref|XP_003122248.2| PREDICTED: probable tRNA pseudouridine synthase 2-like, partial [Sus
scrofa].
Length = 380
Score = 473 bits (1217), Expect = e-133
Identities = 257/311 (82%), Positives = 257/311 (82%)
Frame = +1
Query: 289 GLKWKHLRDTVELQLLKGLNAGKPPAPEQRVRFLLGPVEGSEEKELTLTATTVPSLINHP 468
GLKWKHLRDTVELQLLKGLNAGKPPAPEQRVRFLLGPVEGSEEKELTLTATTVPSLINHP
Sbjct: 1 GLKWKHLRDTVELQLLKGLNAGKPPAPEQRVRFLLGPVEGSEEKELTLTATTVPSLINHP 60
Query: 469 LVRGPAFTSLKVGVGHRLDAQASXXXXXXXXXXXXXXTDMYNAHLTKDYTVRGLLGKATD 648
LVRGPAFTSLKVGVGHRLDAQAS TDMYNAHLTK VRG LG A
Sbjct: 61 LVRGPAFTSLKVGVGHRLDAQASGVLVLGVGHGRRLLTDMYNAHLTK---VRG-LGTACL 116
Query: 649 DFCEDGRLVEKTTFDHVTREKLDRILALIQGSHQKALVMYSNLDLQTQEAYEMAVSGVIR 828
G T DHVTREKLDRILALIQGSHQKALVMYSNLDLQTQEAYEMAVSGVIR
Sbjct: 117 SL---GPFPGVT--DHVTREKLDRILALIQGSHQKALVMYSNLDLQTQEAYEMAVSGVIR 171
Query: 829 PMNKSPMLITGIRCLQFAPPEFLLEVQCMHETQKQLRRLVHEIGLELKSSAVCTQVRRTR 1008
PMNKSPMLITGIRCLQFAPPEFLLEVQCMHETQKQLRRL
Sbjct: 172 PMNKSPMLITGIRCLQFAPPEFLLEVQCMHETQKQLRRL--------------------- 210
Query: 1009 DGFFTLDDALLRTQWDLHSIQDAIQAAVPRVAAELEKSLRPGLATQPLPGPGRSWDSERP 1188
DGFFTLDDALLRTQWDLHSIQDAIQAAVPRVAAELEKSLRPGLATQPLPGPGRSWDSERP
Sbjct: 211 DGFFTLDDALLRTQWDLHSIQDAIQAAVPRVAAELEKSLRPGLATQPLPGPGRSWDSERP 270
Query: 1189 SPALGPDSHVG 1221
SPALGPDSHVG
Sbjct: 271 SPALGPDSHVG 281
>ref|XP_001929431.1| PREDICTED: probable tRNA pseudouridine synthase 1-like [Sus scrofa].
Length = 350
Score = 80.5 bits (197), Expect = 2e-15
Identities = 60/208 (28%), Positives = 93/208 (44%), Gaps = 2/208 (0%)
Frame = +1
Query: 496 LKVGVGHRLDAQASXXXXXXXXXXXXXXTDMYNAHLTKDYTVRGLLGKATDDFCEDGRLV 675
LK+G G LD+ A T + +K Y G LGKATD G++
Sbjct: 112 LKIGHGGTLDSAAGGVLVVGIGRGTKMLTSLLTG--SKRYIAIGELGKATDTLDSTGKVT 169
Query: 676 EKTTFDHVTREKLDRILALIQGSHQKALVMYSNLDLQTQEAYEMAVSG-VIRPMNKSPML 852
E+ +D +T+E ++ IL G+ + +Y L Q + G V+ P+
Sbjct: 170 EEKPYDKITQEDIEGILQKFTGNIMQVPPLYCALKKDGQRLSSLMKRGKVVEAKPARPVT 229
Query: 853 ITGIRCLQFAPPEFLLEVQCMHETQKQLRRLVHEIGLELKSSAVCTQVRRTRDGFFTLDD 1032
+ I F PP F L+V+C +R LV +IG EL S A ++ RT+ G FTL++
Sbjct: 230 VYSISLQNFQPPLFTLDVEC--GGGFYIRSLVSDIGKELSSCASVLELTRTKQGPFTLEE 287
Query: 1033 -ALLRTQWDLHSIQDAIQAAVPRVAAEL 1113
AL +W + I ++ + EL
Sbjct: 288 HALPEDKWTIDDIAQSLDQCASLLPEEL 315
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 38,961,030
Number of extensions: 1946287
Number of successful extensions: 7267
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 7175
Number of HSP's successfully gapped: 3
Length of query: 478
Length of database: 11,343,932
Length adjustment: 103
Effective length of query: 375
Effective length of database: 8,779,541
Effective search space: 3292327875
Effective search space used: 3292327875
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002332
(1436 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr01 753 0.0
gb|GL893334.2| Sus scrofa unplaced genomic scaffold ChrUScaf1219 547 e-153
>Sscrofa_Chr01
|| Length = 315321322
Score = 753 bits (380), Expect = 0.0
Identities = 380/380 (100%)
Strand = Plus / Minus
Query: 901 gaggtgcagtgcatgcatgagacacagaagcagctgcggaggctggtgcatgaaattggc 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302737312 gaggtgcagtgcatgcatgagacacagaagcagctgcggaggctggtgcatgaaattggc 302737253
Query: 961 ctggagctgaagagttccgctgtctgcacccaggtgcggcggacacgcgatggcttcttc 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302737252 ctggagctgaagagttccgctgtctgcacccaggtgcggcggacacgcgatggcttcttc 302737193
Query: 1021 accctggacgacgccctcctgaggacccagtgggacctacatagcatccaggatgccatc 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302737192 accctggacgacgccctcctgaggacccagtgggacctacatagcatccaggatgccatc 302737133
Query: 1081 caggccgcagtgccccgggtggcagcagagttggagaagagcttgaggccggggctggct 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302737132 caggccgcagtgccccgggtggcagcagagttggagaagagcttgaggccggggctggct 302737073
Query: 1141 acccagccgctccctggtccaggccggtcctgggactccgagaggccaagccccgccttg 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302737072 acccagccgctccctggtccaggccggtcctgggactccgagaggccaagccccgccttg 302737013
Query: 1201 ggaccggacagccatgtggggcattgaatggccgggcactggtggagccatgggtgtata 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302737012 ggaccggacagccatgtggggcattgaatggccgggcactggtggagccatgggtgtata 302736953
Query: 1261 aagataagaagtgttccgca 1280
||||||||||||||||||||
Sbjct: 302736952 aagataagaagtgttccgca 302736933
Score = 315 bits (159), Expect = 4e-83
Identities = 159/159 (100%)
Strand = Plus / Minus
Query: 184 tttccgccgggtgccgctgtcctgcgagccccagacgcgggctccgggatggggtcagcc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302746917 tttccgccgggtgccgctgtcctgcgagccccagacgcgggctccgggatggggtcagcc 302746858
Query: 244 ggcctggcgcggctgcatgggctctttgccgcctacaagcccccggggctaaaatggaag 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302746857 ggcctggcgcggctgcatgggctctttgccgcctacaagcccccggggctaaaatggaag 302746798
Query: 304 catctacgggatacggtggagctgcagcttttgaaaggt 342
|||||||||||||||||||||||||||||||||||||||
Sbjct: 302746797 catctacgggatacggtggagctgcagcttttgaaaggt 302746759
Score = 272 bits (137), Expect = 5e-70
Identities = 137/137 (100%)
Strand = Plus / Minus
Query: 765 gtactccaacctcgacctgcagacccaggaggcctatgagatggccgtgagcggcgtgat 824
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302738641 gtactccaacctcgacctgcagacccaggaggcctatgagatggccgtgagcggcgtgat 302738582
Query: 825 ccggcccatgaacaagtccccgatgctaatcaccggcatccgatgcctccagtttgcacc 884
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302738581 ccggcccatgaacaagtccccgatgctaatcaccggcatccgatgcctccagtttgcacc 302738522
Query: 885 cccggaattcctcttgg 901
|||||||||||||||||
Sbjct: 302738521 cccggaattcctcttgg 302738505
Score = 266 bits (134), Expect = 3e-68
Identities = 134/134 (100%)
Strand = Plus / Minus
Query: 339 aggtctcaatgctgggaagcctcctgctcctgaacagcgtgttcgcttcctgctgggtcc 398
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302746388 aggtctcaatgctgggaagcctcctgctcctgaacagcgtgttcgcttcctgctgggtcc 302746329
Query: 399 ggtggaaggcagtgaagagaaggagctgaccctcacagccaccactgtgccctccctcat 458
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302746328 ggtggaaggcagtgaagagaaggagctgaccctcacagccaccactgtgccctccctcat 302746269
Query: 459 caaccatcctctgg 472
||||||||||||||
Sbjct: 302746268 caaccatcctctgg 302746255
Score = 167 bits (84), Expect = 2e-38
Identities = 84/84 (100%)
Strand = Plus / Minus
Query: 608 aggattacaccgtgcgtggcctcctgggcaaggccacagacgacttctgtgaggacgggc 667
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302741291 aggattacaccgtgcgtggcctcctgggcaaggccacagacgacttctgtgaggacgggc 302741232
Query: 668 ggctggtggagaagacgacttttg 691
||||||||||||||||||||||||
Sbjct: 302741231 ggctggtggagaagacgacttttg 302741208
Score = 153 bits (77), Expect = 3e-34
Identities = 77/77 (100%)
Strand = Plus / Minus
Query: 691 gaccacgtgaccagagagaagctggaccgcatcctggccctgatccagggttcccatcag 750
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302739206 gaccacgtgaccagagagaagctggaccgcatcctggccctgatccagggttcccatcag 302739147
Query: 751 aaggccctggtgatgta 767
|||||||||||||||||
Sbjct: 302739146 aaggccctggtgatgta 302739130
Score = 151 bits (76), Expect = 1e-33
Identities = 76/76 (100%)
Strand = Plus / Minus
Query: 472 gtacgtggaccagcattcaccagcctgaaggttggcgtgggacaccgactggatgcccag 531
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302743827 gtacgtggaccagcattcaccagcctgaaggttggcgtgggacaccgactggatgcccag 302743768
Query: 532 gcgtctggggtgctgg 547
||||||||||||||||
Sbjct: 302743767 gcgtctggggtgctgg 302743752
Score = 127 bits (64), Expect = 2e-26
Identities = 64/64 (100%)
Strand = Plus / Minus
Query: 547 gtgctcggcgtgggacacggacgcaggctcctcacagacatgtacaacgcccacctcacc 606
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302742639 gtgctcggcgtgggacacggacgcaggctcctcacagacatgtacaacgcccacctcacc 302742580
Query: 607 aagg 610
||||
Sbjct: 302742579 aagg 302742576
>gb|GL893334.2| Sus scrofa unplaced genomic scaffold ChrUScaf1219
Length = 126167
Score = 547 bits (276), Expect = e-153
Identities = 276/276 (100%)
Strand = Plus / Plus
Query: 1005 acgcgatggcttcttcaccctggacgacgccctcctgaggacccagtgggacctacatag 1064
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 54444 acgcgatggcttcttcaccctggacgacgccctcctgaggacccagtgggacctacatag 54503
Query: 1065 catccaggatgccatccaggccgcagtgccccgggtggcagcagagttggagaagagctt 1124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 54504 catccaggatgccatccaggccgcagtgccccgggtggcagcagagttggagaagagctt 54563
Query: 1125 gaggccggggctggctacccagccgctccctggtccaggccggtcctgggactccgagag 1184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 54564 gaggccggggctggctacccagccgctccctggtccaggccggtcctgggactccgagag 54623
Query: 1185 gccaagccccgccttgggaccggacagccatgtggggcattgaatggccgggcactggtg 1244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 54624 gccaagccccgccttgggaccggacagccatgtggggcattgaatggccgggcactggtg 54683
Query: 1245 gagccatgggtgtataaagataagaagtgttccgca 1280
||||||||||||||||||||||||||||||||||||
Sbjct: 54684 gagccatgggtgtataaagataagaagtgttccgca 54719
Score = 272 bits (137), Expect = 5e-70
Identities = 137/137 (100%)
Strand = Plus / Plus
Query: 765 gtactccaacctcgacctgcagacccaggaggcctatgagatggccgtgagcggcgtgat 824
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52891 gtactccaacctcgacctgcagacccaggaggcctatgagatggccgtgagcggcgtgat 52950
Query: 825 ccggcccatgaacaagtccccgatgctaatcaccggcatccgatgcctccagtttgcacc 884
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52951 ccggcccatgaacaagtccccgatgctaatcaccggcatccgatgcctccagtttgcacc 53010
Query: 885 cccggaattcctcttgg 901
|||||||||||||||||
Sbjct: 53011 cccggaattcctcttgg 53027
Score = 159 bits (80), Expect = 5e-36
Identities = 80/80 (100%)
Strand = Plus / Plus
Query: 184 tttccgccgggtgccgctgtcctgcgagccccagacgcgggctccgggatggggtcagcc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 46714 tttccgccgggtgccgctgtcctgcgagccccagacgcgggctccgggatggggtcagcc 46773
Query: 244 ggcctggcgcggctgcatgg 263
||||||||||||||||||||
Sbjct: 46774 ggcctggcgcggctgcatgg 46793
Score = 153 bits (77), Expect = 3e-34
Identities = 77/77 (100%)
Strand = Plus / Plus
Query: 691 gaccacgtgaccagagagaagctggaccgcatcctggccctgatccagggttcccatcag 750
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52240 gaccacgtgaccagagagaagctggaccgcatcctggccctgatccagggttcccatcag 52299
Query: 751 aaggccctggtgatgta 767
|||||||||||||||||
Sbjct: 52300 aaggccctggtgatgta 52316
Score = 151 bits (76), Expect = 1e-33
Identities = 76/76 (100%)
Strand = Plus / Plus
Query: 472 gtacgtggaccagcattcaccagcctgaaggttggcgtgggacaccgactggatgcccag 531
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 48637 gtacgtggaccagcattcaccagcctgaaggttggcgtgggacaccgactggatgcccag 48696
Query: 532 gcgtctggggtgctgg 547
||||||||||||||||
Sbjct: 48697 gcgtctggggtgctgg 48712
Score = 127 bits (64), Expect = 2e-26
Identities = 64/64 (100%)
Strand = Plus / Plus
Query: 547 gtgctcggcgtgggacacggacgcaggctcctcacagacatgtacaacgcccacctcacc 606
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 49825 gtgctcggcgtgggacacggacgcaggctcctcacagacatgtacaacgcccacctcacc 49884
Query: 607 aagg 610
||||
Sbjct: 49885 aagg 49888
Score = 99.6 bits (50), Expect = 4e-18
Identities = 50/50 (100%)
Strand = Plus / Plus
Query: 901 gaggtgcagtgcatgcatgagacacagaagcagctgcggaggctggtgca 950
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 54294 gaggtgcagtgcatgcatgagacacagaagcagctgcggaggctggtgca 54343
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 26,258,887
Number of extensions: 136
Number of successful extensions: 136
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 136
Number of HSP's successfully gapped: 15
Length of query: 1436
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 1415
Effective length of database: 2,808,413,156
Effective search space: 3973904615740
Effective search space used: 3973904615740
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)