Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002404
(1825 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001070325.1| phosphoribosyl pyrophosphate synthase-associ... 644 0.0
Alignment gi|XP_001790357.1| PREDICTED: phosphoribosyl pyrophosphate synt... 644 0.0
Alignment gi|NP_001074982.1| phosphoribosyl pyrophosphate synthase-associ... 516 e-146
Alignment gi|NP_001107624.1| ribose-phosphate pyrophosphokinase 2 [Bos ta... 233 6e-61
Alignment gi|NP_001039654.1| ribose-phosphate pyrophosphokinase 1 [Bos ta... 231 2e-60
Alignment gi|NP_001095953.1| ribose-phosphate pyrophosphokinase 3 [Bos ta... 165 1e-40
Alignment gi|XP_002700484.1| PREDICTED: PRPS2 protein-like [Bos taurus]. 86 1e-16
>ref|NP_001070325.1| phosphoribosyl pyrophosphate synthase-associated protein 1 [Bos
taurus].
Length = 356
Score = 644 bits (1660), Expect = 0.0
Identities = 333/356 (93%), Positives = 336/356 (94%)
Frame = +3
Query: 261 MNAARTGYRVFSANSTAACTELAKRITERLGAELGKSVVYQETNGETRVEIKESVRGQDI 440
MNAARTGYRVFSANSTAACTELAKRITERLGAELGKSVVYQETNGETRVEI+ESVRGQDI
Sbjct: 1 MNAARTGYRVFSANSTAACTELAKRITERLGAELGKSVVYQETNGETRVEIQESVRGQDI 60
Query: 441 FIIQTIPRDVNTAVMELLIMAYALKTACARNIIGVIPYFPYSKQSKMRKRGSIVCKLLAS 620
FIIQTIPRDVNTAVMELLIMAYALKTACARNIIGVIPYFPYSKQSKMRKRGSIVCKLLAS
Sbjct: 61 FIIQTIPRDVNTAVMELLIMAYALKTACARNIIGVIPYFPYSKQSKMRKRGSIVCKLLAS 120
Query: 621 MLAKAGLTHIITMDLHQKEIQGFFSFPVDNLRASPFLLQYIQEEIPNYRNAVIVAKSPDA 800
MLAKAGLTHIITMDLHQKEIQGFFSFPVDNLRASPFLLQYIQEEIPNYRNAVIVAKSPDA
Sbjct: 121 MLAKAGLTHIITMDLHQKEIQGFFSFPVDNLRASPFLLQYIQEEIPNYRNAVIVAKSPDA 180
Query: 801 AKRAQSYAERLRLGLAVIHGEAQCAELDMDDGRHSPPMVKNATVHPGLELPLMMAKEKPP 980
AKRAQSYAERLRLGLAVIHGEAQCAE+DMDDGRHSPPMVKNATVHPGLELPLMMAKEKPP
Sbjct: 181 AKRAQSYAERLRLGLAVIHGEAQCAEMDMDDGRHSPPMVKNATVHPGLELPLMMAKEKPP 240
Query: 981 ITXXXXXXXXXXXXXXXXXXXXESFVAAAEILKERGAYKIYVMATHGILSAEAPRLIEES 1160
IT ESFVAAAEILKERGAY+IYVMATHGILSAEAPRLIEES
Sbjct: 241 ITVVGDVGGRIAIIVDDIIDDVESFVAAAEILKERGAYRIYVMATHGILSAEAPRLIEES 300
Query: 1161 SIDEVVVTNTVPHEVQKLQCPKIKTVDISLILSEAIRRIHNGESMAYLFRNITVDD 1328
SIDEVVVTNTVPHEVQKLQCPKIKTVDISLILSEAIRRIHNGESMAYLFRNITVDD
Sbjct: 301 SIDEVVVTNTVPHEVQKLQCPKIKTVDISLILSEAIRRIHNGESMAYLFRNITVDD 356
>ref|XP_001790357.1| PREDICTED: phosphoribosyl pyrophosphate synthetase-associated protein
1 [Bos taurus].
Length = 385
Score = 644 bits (1660), Expect = 0.0
Identities = 333/356 (93%), Positives = 336/356 (94%)
Frame = +3
Query: 261 MNAARTGYRVFSANSTAACTELAKRITERLGAELGKSVVYQETNGETRVEIKESVRGQDI 440
MNAARTGYRVFSANSTAACTELAKRITERLGAELGKSVVYQETNGETRVEI+ESVRGQDI
Sbjct: 30 MNAARTGYRVFSANSTAACTELAKRITERLGAELGKSVVYQETNGETRVEIQESVRGQDI 89
Query: 441 FIIQTIPRDVNTAVMELLIMAYALKTACARNIIGVIPYFPYSKQSKMRKRGSIVCKLLAS 620
FIIQTIPRDVNTAVMELLIMAYALKTACARNIIGVIPYFPYSKQSKMRKRGSIVCKLLAS
Sbjct: 90 FIIQTIPRDVNTAVMELLIMAYALKTACARNIIGVIPYFPYSKQSKMRKRGSIVCKLLAS 149
Query: 621 MLAKAGLTHIITMDLHQKEIQGFFSFPVDNLRASPFLLQYIQEEIPNYRNAVIVAKSPDA 800
MLAKAGLTHIITMDLHQKEIQGFFSFPVDNLRASPFLLQYIQEEIPNYRNAVIVAKSPDA
Sbjct: 150 MLAKAGLTHIITMDLHQKEIQGFFSFPVDNLRASPFLLQYIQEEIPNYRNAVIVAKSPDA 209
Query: 801 AKRAQSYAERLRLGLAVIHGEAQCAELDMDDGRHSPPMVKNATVHPGLELPLMMAKEKPP 980
AKRAQSYAERLRLGLAVIHGEAQCAE+DMDDGRHSPPMVKNATVHPGLELPLMMAKEKPP
Sbjct: 210 AKRAQSYAERLRLGLAVIHGEAQCAEMDMDDGRHSPPMVKNATVHPGLELPLMMAKEKPP 269
Query: 981 ITXXXXXXXXXXXXXXXXXXXXESFVAAAEILKERGAYKIYVMATHGILSAEAPRLIEES 1160
IT ESFVAAAEILKERGAY+IYVMATHGILSAEAPRLIEES
Sbjct: 270 ITVVGDVGGRIAIIVDDIIDDVESFVAAAEILKERGAYRIYVMATHGILSAEAPRLIEES 329
Query: 1161 SIDEVVVTNTVPHEVQKLQCPKIKTVDISLILSEAIRRIHNGESMAYLFRNITVDD 1328
SIDEVVVTNTVPHEVQKLQCPKIKTVDISLILSEAIRRIHNGESMAYLFRNITVDD
Sbjct: 330 SIDEVVVTNTVPHEVQKLQCPKIKTVDISLILSEAIRRIHNGESMAYLFRNITVDD 385
>ref|NP_001074982.1| phosphoribosyl pyrophosphate synthase-associated protein 2 [Bos
taurus].
Length = 369
Score = 516 bits (1329), Expect = e-146
Identities = 258/357 (72%), Positives = 304/357 (85%), Gaps = 1/357 (0%)
Frame = +3
Query: 261 MNAARTGYRVFSANSTAACTELAKRITERLGAELGKSVVYQETNGETRVEIKESVRGQDI 440
MN + G +FSANS ++C EL+K+I ERLG E+GK VYQE + ETRV+I+ESVRG+D+
Sbjct: 13 MNITKGGLVLFSANSNSSCMELSKKIAERLGVEMGKVQVYQEPDRETRVQIQESVRGKDV 72
Query: 441 FIIQTIPRDVNTAVMELLIMAYALKTACARNIIGVIPYFPYSKQSKMRKRGSIVCKLLAS 620
FIIQT+ +DVNT +MELLIM YA KT+CA++IIGV+PYFPYSKQ KMRKRGSIV KLLAS
Sbjct: 73 FIIQTVSKDVNTTIMELLIMVYACKTSCAKSIIGVVPYFPYSKQCKMRKRGSIVSKLLAS 132
Query: 621 MLAKAGLTHIITMDLHQKEIQGFFSFPVDNLRASPFLLQYIQEEIPNYRNAVIVAKSPDA 800
M+ KAGLTH+ITMDLHQKEIQGFF+ PVDNLRASPFLLQYIQEEIP+YRNAVIVAKSP +
Sbjct: 133 MMCKAGLTHLITMDLHQKEIQGFFNIPVDNLRASPFLLQYIQEEIPDYRNAVIVAKSPAS 192
Query: 801 AKRAQSYAERLRLGLAVIHGEAQCAELDMDDGRHSPPMVKN-ATVHPGLELPLMMAKEKP 977
AKRAQS+AERLRLG+AVIHGEAQ AE D+ DGRHSPPMV++ A +HP LE+P+++ KEKP
Sbjct: 193 AKRAQSFAERLRLGIAVIHGEAQDAESDLVDGRHSPPMVRSAAAIHPSLEIPMLIPKEKP 252
Query: 978 PITXXXXXXXXXXXXXXXXXXXXESFVAAAEILKERGAYKIYVMATHGILSAEAPRLIEE 1157
PIT +SF+AAAE LKERGAYKI+VMATHG+LS++AP LIEE
Sbjct: 253 PITVVGDVGGRIAIIVDDIIDDVDSFLAAAETLKERGAYKIFVMATHGLLSSDAPLLIEE 312
Query: 1158 SSIDEVVVTNTVPHEVQKLQCPKIKTVDISLILSEAIRRIHNGESMAYLFRNITVDD 1328
S+IDEVVVTNT+PHE+QKLQCPKIKTVDIS+ LSEAIRRIHNGESM+YLFRNI +DD
Sbjct: 313 SAIDEVVVTNTIPHEIQKLQCPKIKTVDISMTLSEAIRRIHNGESMSYLFRNIGLDD 369
>ref|NP_001107624.1| ribose-phosphate pyrophosphokinase 2 [Bos taurus].
Length = 321
Score = 233 bits (593), Expect = 6e-61
Identities = 142/337 (42%), Positives = 197/337 (58%), Gaps = 5/337 (1%)
Frame = +3
Query: 321 ELAKRITERLGAELGKSVVYQETNGETRVEIKESVRGQDIFIIQTIPRDVNTAVMELLIM 500
+L++R+ +RLG ELGK + + +N ET VEI ESVRG+D++IIQ+ ++N +MELLIM
Sbjct: 14 DLSQRVADRLGLELGKVITKKFSNQETSVEIGESVRGEDVYIIQSGCGEINDNLMELLIM 73
Query: 501 AYALKTACARNIIGVIPYFPYSKQSKMRK----RGSIVCKLLASMLAKAGLTHIITMDLH 668
A K A + + VIP FPY++Q K K R I KL+A+ML+ AG HIITMDLH
Sbjct: 74 INACKIASSSRVTAVIPCFPYARQDKKDKVSASRAPISAKLVANMLSVAGADHIITMDLH 133
Query: 669 QKEIQGFFSFPVDNLRASPFLLQYIQEEIPNYRNAVIVAKSPDAAKRAQSYAERLRLGLA 848
+IQGFF PVDNL A P +LQ+I+E I +++N +IV+ AKR S A+RL + A
Sbjct: 134 ASQIQGFFDIPVDNLYAEPAVLQWIRENITDWKNCIIVSPDAGGAKRVTSIADRLNVEFA 193
Query: 849 VIHGEAQCA-ELDMDDGRHSPPMVKNATVHPGLELPLMMAKEKPPITXXXXXXXXXXXXX 1025
+IH E + A E+D MV V K++ I
Sbjct: 194 LIHKERKKANEVDR--------MVLVGDV-----------KDRVAILVDDMADTCG---- 230
Query: 1026 XXXXXXXESFVAAAEILKERGAYKIYVMATHGILSAEAPRLIEESSIDEVVVTNTVPHEV 1205
+ AA+ L GA K+Y + THGI S A I ++ + VVVTNT+P E
Sbjct: 231 --------TICHAADKLLSAGATKVYAILTHGIFSGPAISRINNAAFEAVVVTNTIPQED 282
Query: 1206 QKLQCPKIKTVDISLILSEAIRRIHNGESMAYLFRNI 1316
+ C KI+ +DIS+IL+EAIRR HNGES++YLF ++
Sbjct: 283 KMKHCSKIQVIDISMILAEAIRRTHNGESVSYLFSHV 319
>ref|NP_001039654.1| ribose-phosphate pyrophosphokinase 1 [Bos taurus].
Length = 318
Score = 231 bits (589), Expect = 2e-60
Identities = 145/346 (41%), Positives = 200/346 (57%), Gaps = 2/346 (0%)
Frame = +3
Query: 285 RVFSANSTAACTELAKRITERLGAELGKSVVYQETNGETRVEIKESVRGQDIFIIQTIPR 464
++FS +S +L+++I +RLG ELGK V + +N ET VEI ESVRG+D++I+Q+
Sbjct: 5 KIFSGSSHQ---DLSQKIADRLGLELGKVVTKKFSNQETCVEIGESVRGEDVYIVQSGCG 61
Query: 465 DVNTAVMELLIMAYALKTACARNIIGVIPYFPYSKQSKMRK-RGSIVCKLLASMLAKAGL 641
++N +MELLIM A K A A + VIP FPY++Q K K R I KL+A+ML+ AG
Sbjct: 62 EINDNLMELLIMINACKIASASRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAGA 121
Query: 642 THIITMDLHQKEIQGFFSFPVDNLRASPFLLQYIQEEIPNYRNAVIVAKSPDAAKRAQSY 821
HIITMDLH +IQGFF PVDNL A P +L++I+E I +RN IV+ AKR S
Sbjct: 122 DHIITMDLHASQIQGFFDIPVDNLYAEPAVLKWIRENISEWRNCTIVSPDAGGAKRVTSI 181
Query: 822 AERLRLGLAVIHGEAQCA-ELDMDDGRHSPPMVKNATVHPGLELPLMMAKEKPPITXXXX 998
A+RL + A+IH E + A E+D MV V K++ I
Sbjct: 182 ADRLNVDFALIHKERKKANEVDR--------MVLVGDV-----------KDRVAILVDDM 222
Query: 999 XXXXXXXXXXXXXXXXESFVAAAEILKERGAYKIYVMATHGILSAEAPRLIEESSIDEVV 1178
+ AA+ L GA ++Y + THGI S A I + + VV
Sbjct: 223 ADTCG------------TICHAADKLLSAGATRVYAILTHGIFSGPAISRINNACFEAVV 270
Query: 1179 VTNTVPHEVQKLQCPKIKTVDISLILSEAIRRIHNGESMAYLFRNI 1316
VTNT+P E + C KI+ +DIS+IL+EAIRR HNGES++YLF ++
Sbjct: 271 VTNTIPQEDKMKHCSKIQVIDISMILAEAIRRTHNGESVSYLFSHV 316
>ref|NP_001095953.1| ribose-phosphate pyrophosphokinase 3 [Bos taurus].
Length = 329
Score = 165 bits (418), Expect = 1e-40
Identities = 91/192 (47%), Positives = 127/192 (66%), Gaps = 1/192 (0%)
Frame = +3
Query: 285 RVFSANSTAACTELAKRITERLGAELGKSVVYQETNGETRVEIKESVRGQDIFIIQTIPR 464
++FS S +L+++I +RLG ELGK V + +N ET VEI ESV+G+D++I+Q+
Sbjct: 16 KIFSGRSHQ---DLSQKIADRLGLELGKVVTKKLSNQETCVEIGESVQGEDVYIVQSGCG 72
Query: 465 DVNTAVMELLIMAYALKTACARNIIGVIPYFPYSKQSKM-RKRGSIVCKLLASMLAKAGL 641
++N +MELLIM A K A A + VIP FPY++Q K R I KL+A ML+ AG
Sbjct: 73 EINDNLMELLIMINACKIASAGRVTAVIPCFPYARQDKRGESRAPISAKLVADMLSTAGA 132
Query: 642 THIITMDLHQKEIQGFFSFPVDNLRASPFLLQYIQEEIPNYRNAVIVAKSPDAAKRAQSY 821
HIITMDLH +IQGFF PVDNL A P +L++I+E+I ++R+ IV+ KRA S
Sbjct: 133 DHIITMDLHASQIQGFFDIPVDNLCAEPAVLKWIKEQISDWRSCTIVSPDAGEVKRATSI 192
Query: 822 AERLRLGLAVIH 857
A+RL + A+IH
Sbjct: 193 ADRLNVDFALIH 204
Score = 86.7 bits (213), Expect = 6e-17
Identities = 42/85 (49%), Positives = 59/85 (69%)
Frame = +3
Query: 1062 AAEILKERGAYKIYVMATHGILSAEAPRLIEESSIDEVVVTNTVPHEVQKLQCPKIKTVD 1241
AA+ L GA ++Y + THGI S A I + + VVVTNTVP E + C KI+ +D
Sbjct: 243 AADKLLSAGATRVYAILTHGIFSGPAVTRINSAGFEAVVVTNTVPQEDKMKHCSKIQVID 302
Query: 1242 ISLILSEAIRRIHNGESMAYLFRNI 1316
IS+IL+EAIRRIH+G+S++YLF ++
Sbjct: 303 ISMILAEAIRRIHSGKSVSYLFSHV 327
>ref|XP_002700484.1| PREDICTED: PRPS2 protein-like [Bos taurus].
Length = 349
Score = 85.5 bits (210), Expect = 1e-16
Identities = 43/89 (48%), Positives = 62/89 (69%)
Frame = +3
Query: 321 ELAKRITERLGAELGKSVVYQETNGETRVEIKESVRGQDIFIIQTIPRDVNTAVMELLIM 500
+L++R+ +RLG ELGK + + +N ET VEI ESVRG+D++IIQ+ ++N +MELLIM
Sbjct: 260 DLSQRVADRLGLELGKVITKKFSNQETSVEIGESVRGEDVYIIQSGCGEINDNLMELLIM 319
Query: 501 AYALKTACARNIIGVIPYFPYSKQSKMRK 587
A K A + + VIP FPY++Q K K
Sbjct: 320 INACKIASSSRVTAVIPCFPYARQDKKDK 348
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 67,032,134
Number of extensions: 1980027
Number of successful extensions: 10843
Number of sequences better than 1.0e-05: 7
Number of HSP's gapped: 10758
Number of HSP's successfully gapped: 10
Length of query: 608
Length of database: 17,681,374
Length adjustment: 108
Effective length of query: 500
Effective length of database: 14,107,870
Effective search space: 7053935000
Effective search space used: 7053935000
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002404
(1825 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_849109.1| PREDICTED: similar to Phosphoribosyl pyrophosph... 645 0.0
Alignment gi|XP_858137.1| PREDICTED: similar to Phosphoribosyl pyrophosph... 636 0.0
Alignment gi|XP_858097.1| PREDICTED: similar to Phosphoribosyl pyrophosph... 621 e-178
Alignment gi|XP_858052.1| PREDICTED: similar to Phosphoribosyl pyrophosph... 590 e-168
Alignment gi|XP_546654.2| PREDICTED: similar to phosphoribosyl pyrophosph... 523 e-148
Alignment gi|XP_864392.1| PREDICTED: similar to phosphoribosyl pyrophosph... 512 e-145
Alignment gi|XP_864371.1| PREDICTED: similar to phosphoribosyl pyrophosph... 505 e-143
Alignment gi|XP_864306.1| PREDICTED: similar to phosphoribosyl pyrophosph... 504 e-142
Alignment gi|XP_864351.1| PREDICTED: similar to phosphoribosyl pyrophosph... 499 e-141
Alignment gi|XP_864326.1| PREDICTED: similar to phosphoribosyl pyrophosph... 496 e-140
>ref|XP_849109.1| PREDICTED: similar to Phosphoribosyl pyrophosphate
synthetase-associated protein 1 (PRPP
synthetase-associated protein 1) (39 kDa
phosphoribosypyrophosphate synthetase-associated protein)
(PAP39) isoform 1 [Canis familiaris].
Length = 385
Score = 645 bits (1665), Expect = 0.0
Identities = 335/356 (94%), Positives = 335/356 (94%)
Frame = +3
Query: 261 MNAARTGYRVFSANSTAACTELAKRITERLGAELGKSVVYQETNGETRVEIKESVRGQDI 440
MNAARTGYRVFSANSTAACTELAKRITERLGAELGKSVVYQETNGETRVEIKESVRGQDI
Sbjct: 30 MNAARTGYRVFSANSTAACTELAKRITERLGAELGKSVVYQETNGETRVEIKESVRGQDI 89
Query: 441 FIIQTIPRDVNTAVMELLIMAYALKTACARNIIGVIPYFPYSKQSKMRKRGSIVCKLLAS 620
FIIQTIPRDVNTAVMELLIMAYALKTACARNIIGVIPYFPYSKQSKMRKRGSIVCKLLAS
Sbjct: 90 FIIQTIPRDVNTAVMELLIMAYALKTACARNIIGVIPYFPYSKQSKMRKRGSIVCKLLAS 149
Query: 621 MLAKAGLTHIITMDLHQKEIQGFFSFPVDNLRASPFLLQYIQEEIPNYRNAVIVAKSPDA 800
MLAKAGLTHIITMDLHQKEIQGFFSFPVDNLRASPFLLQYIQEEIPNYRNAVIVAKSPDA
Sbjct: 150 MLAKAGLTHIITMDLHQKEIQGFFSFPVDNLRASPFLLQYIQEEIPNYRNAVIVAKSPDA 209
Query: 801 AKRAQSYAERLRLGLAVIHGEAQCAELDMDDGRHSPPMVKNATVHPGLELPLMMAKEKPP 980
AKRAQSYAERLRLGLAVIHGEAQC ELDMDDGRHSPPMVKNATVHPGLELPLMMAKEKPP
Sbjct: 210 AKRAQSYAERLRLGLAVIHGEAQCTELDMDDGRHSPPMVKNATVHPGLELPLMMAKEKPP 269
Query: 981 ITXXXXXXXXXXXXXXXXXXXXESFVAAAEILKERGAYKIYVMATHGILSAEAPRLIEES 1160
IT ESFVAAAEILKERGAYKIYVMATHGILSAEAPRLIEES
Sbjct: 270 ITVVGDVGGRIAIIVDDIIDDVESFVAAAEILKERGAYKIYVMATHGILSAEAPRLIEES 329
Query: 1161 SIDEVVVTNTVPHEVQKLQCPKIKTVDISLILSEAIRRIHNGESMAYLFRNITVDD 1328
SIDEVVVTNTVPHEVQKLQCPKIKTVDISLILSEAIRRIHNGESMAYLFRNITVDD
Sbjct: 330 SIDEVVVTNTVPHEVQKLQCPKIKTVDISLILSEAIRRIHNGESMAYLFRNITVDD 385
>ref|XP_858137.1| PREDICTED: similar to Phosphoribosyl pyrophosphate
synthetase-associated protein 1 (PRPP
synthetase-associated protein 1) (39 kDa
phosphoribosypyrophosphate synthetase-associated protein)
(PAP39) isoform 6 [Canis familiaris].
Length = 398
Score = 636 bits (1641), Expect = 0.0
Identities = 335/369 (90%), Positives = 335/369 (90%), Gaps = 13/369 (3%)
Frame = +3
Query: 261 MNAARTGYRVFSANSTAACTELAKRITERLGAELGKSVVYQETNGETRVEIKESVRGQDI 440
MNAARTGYRVFSANSTAACTELAKRITERLGAELGKSVVYQETNGETRVEIKESVRGQDI
Sbjct: 30 MNAARTGYRVFSANSTAACTELAKRITERLGAELGKSVVYQETNGETRVEIKESVRGQDI 89
Query: 441 FIIQTIPRDVNTAVMELLIMAYALKTACARNIIGVIPYFPYSKQSKMRKRGSIVCKLLAS 620
FIIQTIPRDVNTAVMELLIMAYALKTACARNIIGVIPYFPYSKQSKMRKRGSIVCKLLAS
Sbjct: 90 FIIQTIPRDVNTAVMELLIMAYALKTACARNIIGVIPYFPYSKQSKMRKRGSIVCKLLAS 149
Query: 621 MLAKAGLTHIITMDLHQKEIQGFFSFPVDNLRASPFLLQYIQEEIPNYRNAVIVAKSPDA 800
MLAKAGLTHIITMDLHQKEIQGFFSFPVDNLRASPFLLQYIQEEIPNYRNAVIVAKSPDA
Sbjct: 150 MLAKAGLTHIITMDLHQKEIQGFFSFPVDNLRASPFLLQYIQEEIPNYRNAVIVAKSPDA 209
Query: 801 AKRAQSYAERLRLGLAVIHGEAQCAELDMDDGRHSPPMVKNATVHPGLELP--------- 953
AKRAQSYAERLRLGLAVIHGEAQC ELDMDDGRHSPPMVKNATVHPGLELP
Sbjct: 210 AKRAQSYAERLRLGLAVIHGEAQCTELDMDDGRHSPPMVKNATVHPGLELPCKISSIFPQ 269
Query: 954 ----LMMAKEKPPITXXXXXXXXXXXXXXXXXXXXESFVAAAEILKERGAYKIYVMATHG 1121
LMMAKEKPPIT ESFVAAAEILKERGAYKIYVMATHG
Sbjct: 270 LTLILMMAKEKPPITVVGDVGGRIAIIVDDIIDDVESFVAAAEILKERGAYKIYVMATHG 329
Query: 1122 ILSAEAPRLIEESSIDEVVVTNTVPHEVQKLQCPKIKTVDISLILSEAIRRIHNGESMAY 1301
ILSAEAPRLIEESSIDEVVVTNTVPHEVQKLQCPKIKTVDISLILSEAIRRIHNGESMAY
Sbjct: 330 ILSAEAPRLIEESSIDEVVVTNTVPHEVQKLQCPKIKTVDISLILSEAIRRIHNGESMAY 389
Query: 1302 LFRNITVDD 1328
LFRNITVDD
Sbjct: 390 LFRNITVDD 398
>ref|XP_858097.1| PREDICTED: similar to Phosphoribosyl pyrophosphate
synthetase-associated protein 1 (PRPP
synthetase-associated protein 1) (39 kDa
phosphoribosypyrophosphate synthetase-associated protein)
(PAP39) isoform 5 [Canis familiaris].
Length = 398
Score = 621 bits (1601), Expect = e-178
Identities = 330/369 (89%), Positives = 331/369 (89%), Gaps = 13/369 (3%)
Frame = +3
Query: 261 MNAARTGYRVFSANSTAACTELAKRITERLGAELGKSVVYQETNGETRVEIKESVRGQDI 440
MNAARTGYRVFSANSTAACTELAKRITERLGAELGKSVVYQETNGETRVEIKESVRGQDI
Sbjct: 30 MNAARTGYRVFSANSTAACTELAKRITERLGAELGKSVVYQETNGETRVEIKESVRGQDI 89
Query: 441 FIIQTIPRDVNTAVMELLIMAYALKTACARNIIGVIPYFPYSKQSKMRKRGSIVCKLLAS 620
FIIQTIPRDVNTAVMELLIMAYALKTACARNIIGVIPYFPYSKQSKMRKRGSIVCKLLAS
Sbjct: 90 FIIQTIPRDVNTAVMELLIMAYALKTACARNIIGVIPYFPYSKQSKMRKRGSIVCKLLAS 149
Query: 621 MLAKAGLTHIITMDLHQKEIQGFFSFPVDNLRASPFLLQYIQEEIPNYRNAVIVAKSPDA 800
MLAKAGLTHIITMDLHQKEIQGFFSFPVDNLRASPFLLQYIQEEIPNYRNAVIVAKSPDA
Sbjct: 150 MLAKAGLTHIITMDLHQKEIQGFFSFPVDNLRASPFLLQYIQEEIPNYRNAVIVAKSPDA 209
Query: 801 AKRAQSYAERLRLGLAVIHGEAQCAELDMDDGRHSPPMVKNATV--HPG----------- 941
AKRAQSYAERLRLGLAVIHGEAQC ELDMDDGRHSPPMVKNAT HP
Sbjct: 210 AKRAQSYAERLRLGLAVIHGEAQCTELDMDDGRHSPPMVKNATPPRHPNFSARQLRCSQE 269
Query: 942 LELPLMMAKEKPPITXXXXXXXXXXXXXXXXXXXXESFVAAAEILKERGAYKIYVMATHG 1121
L P+MMAKEKPPIT ESFVAAAEILKERGAYKIYVMATHG
Sbjct: 270 LGEPVMMAKEKPPITVVGDVGGRIAIIVDDIIDDVESFVAAAEILKERGAYKIYVMATHG 329
Query: 1122 ILSAEAPRLIEESSIDEVVVTNTVPHEVQKLQCPKIKTVDISLILSEAIRRIHNGESMAY 1301
ILSAEAPRLIEESSIDEVVVTNTVPHEVQKLQCPKIKTVDISLILSEAIRRIHNGESMAY
Sbjct: 330 ILSAEAPRLIEESSIDEVVVTNTVPHEVQKLQCPKIKTVDISLILSEAIRRIHNGESMAY 389
Query: 1302 LFRNITVDD 1328
LFRNITVDD
Sbjct: 390 LFRNITVDD 398
>ref|XP_858052.1| PREDICTED: similar to Phosphoribosyl pyrophosphate
synthetase-associated protein 1 (PRPP
synthetase-associated protein 1) (39 kDa
phosphoribosypyrophosphate synthetase-associated protein)
(PAP39) isoform 4 [Canis familiaris].
Length = 362
Score = 590 bits (1521), Expect = e-168
Identities = 312/356 (87%), Positives = 312/356 (87%)
Frame = +3
Query: 261 MNAARTGYRVFSANSTAACTELAKRITERLGAELGKSVVYQETNGETRVEIKESVRGQDI 440
MNAARTGYRVFSANSTAACTELAKRITERLGAELGKSVVYQETNGETRVEIKESVRGQDI
Sbjct: 30 MNAARTGYRVFSANSTAACTELAKRITERLGAELGKSVVYQETNGETRVEIKESVRGQDI 89
Query: 441 FIIQTIPRDVNTAVMELLIMAYALKTACARNIIGVIPYFPYSKQSKMRKRGSIVCKLLAS 620
FIIQTIPRDVNTAVMELLIMAYALKTACARNIIGVIPYFPYSKQSKMRKRGSIVCKLLAS
Sbjct: 90 FIIQTIPRDVNTAVMELLIMAYALKTACARNIIGVIPYFPYSKQSKMRKRGSIVCKLLAS 149
Query: 621 MLAKAGLTHIITMDLHQKEIQGFFSFPVDNLRASPFLLQYIQEEIPNYRNAVIVAKSPDA 800
MLAKAGLTHIITMDLHQKEIQGFFSFPVDNLRASPFLLQYIQEEIPNYRNAVIVAKSPDA
Sbjct: 150 MLAKAGLTHIITMDLHQKEIQGFFSFPVDNLRASPFLLQYIQEEIPNYRNAVIVAKSPDA 209
Query: 801 AKRAQSYAERLRLGLAVIHGEAQCAELDMDDGRHSPPMVKNATVHPGLELPLMMAKEKPP 980
AKRAQSYAERLRLGLAVIHGEAQC ELDMDDGRHSPPMVKNATVHPGLELPLMMAKEKPP
Sbjct: 210 AKRAQSYAERLRLGLAVIHGEAQCTELDMDDGRHSPPMVKNATVHPGLELPLMMAKEKPP 269
Query: 981 ITXXXXXXXXXXXXXXXXXXXXESFVAAAEILKERGAYKIYVMATHGILSAEAPRLIEES 1160
IT ESFVAAAEILKERGAYKIY
Sbjct: 270 ITVVGDVGGRIAIIVDDIIDDVESFVAAAEILKERGAYKIY------------------- 310
Query: 1161 SIDEVVVTNTVPHEVQKLQCPKIKTVDISLILSEAIRRIHNGESMAYLFRNITVDD 1328
VVVTNTVPHEVQKLQCPKIKTVDISLILSEAIRRIHNGESMAYLFRNITVDD
Sbjct: 311 ----VVVTNTVPHEVQKLQCPKIKTVDISLILSEAIRRIHNGESMAYLFRNITVDD 362
>ref|XP_546654.2| PREDICTED: similar to phosphoribosyl pyrophosphate
synthetase-associated protein 2 isoform 1 [Canis
familiaris].
Length = 369
Score = 523 bits (1347), Expect = e-148
Identities = 262/357 (73%), Positives = 306/357 (85%), Gaps = 1/357 (0%)
Frame = +3
Query: 261 MNAARTGYRVFSANSTAACTELAKRITERLGAELGKSVVYQETNGETRVEIKESVRGQDI 440
MN + G +FSANS ++C EL+K+I ERLG E+GK VYQE N ETRV+I+ESVRG+D+
Sbjct: 13 MNITKGGLVLFSANSNSSCMELSKKIAERLGVEMGKVQVYQEPNRETRVQIQESVRGKDV 72
Query: 441 FIIQTIPRDVNTAVMELLIMAYALKTACARNIIGVIPYFPYSKQSKMRKRGSIVCKLLAS 620
FIIQT+ +DVNT +MELLIM YA KT+CA++IIGVIPYFPYSKQ KMRKRGSIV KLLAS
Sbjct: 73 FIIQTVSKDVNTTIMELLIMVYACKTSCAKSIIGVIPYFPYSKQCKMRKRGSIVSKLLAS 132
Query: 621 MLAKAGLTHIITMDLHQKEIQGFFSFPVDNLRASPFLLQYIQEEIPNYRNAVIVAKSPDA 800
M+ KAGLTH+ITMDLHQKEIQGFF+ PVDNLRASPFLLQYIQEEIP+YRNAVIVAKSP +
Sbjct: 133 MMCKAGLTHLITMDLHQKEIQGFFNIPVDNLRASPFLLQYIQEEIPDYRNAVIVAKSPAS 192
Query: 801 AKRAQSYAERLRLGLAVIHGEAQCAELDMDDGRHSPPMVKN-ATVHPGLELPLMMAKEKP 977
AKRAQS+AERLRLG+AVIHGEAQ AE D+ DGRHSPPMV++ A +HP LE+P+++ KEKP
Sbjct: 193 AKRAQSFAERLRLGIAVIHGEAQDAESDLVDGRHSPPMVRSVAAIHPSLEIPMLIPKEKP 252
Query: 978 PITXXXXXXXXXXXXXXXXXXXXESFVAAAEILKERGAYKIYVMATHGILSAEAPRLIEE 1157
PIT +SF+AAAE LKERGAYKI+VMATHG+LS++APRLIEE
Sbjct: 253 PITVVGDVGGRIAIIVDDIIDDVDSFLAAAETLKERGAYKIFVMATHGLLSSDAPRLIEE 312
Query: 1158 SSIDEVVVTNTVPHEVQKLQCPKIKTVDISLILSEAIRRIHNGESMAYLFRNITVDD 1328
S+IDEVVVTNT+PHE+QKLQCPKIKTVDIS+ILSEAIRRIHNGESM+YLFRNI +DD
Sbjct: 313 SAIDEVVVTNTIPHEIQKLQCPKIKTVDISMILSEAIRRIHNGESMSYLFRNIGLDD 369
>ref|XP_864392.1| PREDICTED: similar to phosphoribosyl pyrophosphate
synthetase-associated protein 2 isoform 10 [Canis
familiaris].
Length = 388
Score = 512 bits (1319), Expect = e-145
Identities = 263/376 (69%), Positives = 306/376 (81%), Gaps = 20/376 (5%)
Frame = +3
Query: 261 MNAARTGYRVFSANSTAACTELAKRITERLGAELGKSVVYQETNGETRVEIKESVRGQDI 440
MN + G +FSANS ++C EL+K+I ERLG E+GK VYQE N ETRV+I+ESVRG+D+
Sbjct: 13 MNITKGGLVLFSANSNSSCMELSKKIAERLGVEMGKVQVYQEPNRETRVQIQESVRGKDV 72
Query: 441 FIIQTIPRDVNTAVMELLIMAYALKTACARNIIGVIPYFPYSKQSKMRKRGSIVCKLLAS 620
FIIQT+ +DVNT +MELLIM YA KT+CA++IIGVIPYFPYSKQ KMRKRGSIV KLLAS
Sbjct: 73 FIIQTVSKDVNTTIMELLIMVYACKTSCAKSIIGVIPYFPYSKQCKMRKRGSIVSKLLAS 132
Query: 621 MLAKAGLTHIITMDLHQKEIQGFFSFPVDNLRASPFLLQYIQEEIPNYRNAVIVAKSPDA 800
M+ KAGLTH+ITMDLHQKEIQGFF+ PVDNLRASPFLLQYIQEEIP+YRNAVIVAKSP +
Sbjct: 133 MMCKAGLTHLITMDLHQKEIQGFFNIPVDNLRASPFLLQYIQEEIPDYRNAVIVAKSPAS 192
Query: 801 AKRAQSYAERLRLGLAVIHGEAQCAELDMDDGRHSPPMVKN-ATVHPGLEL--------- 950
AKRAQS+AERLRLG+AVIHGEAQ AE D+ DGRHSPPMV++ A +HP LE+
Sbjct: 193 AKRAQSFAERLRLGIAVIHGEAQDAESDLVDGRHSPPMVRSVAAIHPSLEIPSKWAGPSL 252
Query: 951 ----------PLMMAKEKPPITXXXXXXXXXXXXXXXXXXXXESFVAAAEILKERGAYKI 1100
PL++ KEKPPIT +SF+AAAE LKERGAYKI
Sbjct: 253 SLPSLLLGLTPLLIPKEKPPITVVGDVGGRIAIIVDDIIDDVDSFLAAAETLKERGAYKI 312
Query: 1101 YVMATHGILSAEAPRLIEESSIDEVVVTNTVPHEVQKLQCPKIKTVDISLILSEAIRRIH 1280
+VMATHG+LS++APRLIEES+IDEVVVTNT+PHE+QKLQCPKIKTVDIS+ILSEAIRRIH
Sbjct: 313 FVMATHGLLSSDAPRLIEESAIDEVVVTNTIPHEIQKLQCPKIKTVDISMILSEAIRRIH 372
Query: 1281 NGESMAYLFRNITVDD 1328
NGESM+YLFRNI +DD
Sbjct: 373 NGESMSYLFRNIGLDD 388
>ref|XP_864371.1| PREDICTED: similar to phosphoribosyl pyrophosphate
synthetase-associated protein 2 isoform 9 [Canis
familiaris].
Length = 381
Score = 505 bits (1300), Expect = e-143
Identities = 260/371 (70%), Positives = 302/371 (81%), Gaps = 15/371 (4%)
Frame = +3
Query: 261 MNAARTGYRVFSANSTAACTELAKRITERLGAELGKSVVYQETNGETRVEIKESVRGQDI 440
MN + G +FSANS ++C EL+K+I ERLG E+GK VYQE N ETRV+I+ESVRG+D+
Sbjct: 13 MNITKGGLVLFSANSNSSCMELSKKIAERLGVEMGKVQVYQEPNRETRVQIQESVRGKDV 72
Query: 441 FIIQTIPRDVNTAVMELLIMAYALKTACARNIIGVIPYFPYSKQSKMRKRGSIVCKLLAS 620
FIIQT+ +DVNT +MELLIM YA KT+CA++IIGVIPYFPYSKQ KMRKRGSIV KLLAS
Sbjct: 73 FIIQTVSKDVNTTIMELLIMVYACKTSCAKSIIGVIPYFPYSKQCKMRKRGSIVSKLLAS 132
Query: 621 MLAKAGLTHIITMDLHQKEIQGFFSFPVDNLRASPFLLQYIQEEIPNYRNAVIVAKSPDA 800
M+ KAGLTH+ITMDLHQKEIQGFF+ PVDNLRASPFLLQYIQEEIP+YRNAVIVAKSP +
Sbjct: 133 MMCKAGLTHLITMDLHQKEIQGFFNIPVDNLRASPFLLQYIQEEIPDYRNAVIVAKSPAS 192
Query: 801 AKRAQSYAERLRLGLAVIHGEAQCAELDMDDGRHSPPMVK---------------NATVH 935
AKRAQS+AERLRLG+AVIHGEAQ AE D+ DGRHSPPMV+ N +
Sbjct: 193 AKRAQSFAERLRLGIAVIHGEAQDAESDLVDGRHSPPMVRSRQRQREKQTPCREPNVGLD 252
Query: 936 PGLELPLMMAKEKPPITXXXXXXXXXXXXXXXXXXXXESFVAAAEILKERGAYKIYVMAT 1115
PG P+++ KEKPPIT +SF+AAAE LKERGAYKI+VMAT
Sbjct: 253 PG--SPVLIPKEKPPITVVGDVGGRIAIIVDDIIDDVDSFLAAAETLKERGAYKIFVMAT 310
Query: 1116 HGILSAEAPRLIEESSIDEVVVTNTVPHEVQKLQCPKIKTVDISLILSEAIRRIHNGESM 1295
HG+LS++APRLIEES+IDEVVVTNT+PHE+QKLQCPKIKTVDIS+ILSEAIRRIHNGESM
Sbjct: 311 HGLLSSDAPRLIEESAIDEVVVTNTIPHEIQKLQCPKIKTVDISMILSEAIRRIHNGESM 370
Query: 1296 AYLFRNITVDD 1328
+YLFRNI +DD
Sbjct: 371 SYLFRNIGLDD 381
>ref|XP_864306.1| PREDICTED: similar to phosphoribosyl pyrophosphate
synthetase-associated protein 2 isoform 6 [Canis
familiaris].
Length = 373
Score = 504 bits (1297), Expect = e-142
Identities = 257/361 (71%), Positives = 298/361 (82%), Gaps = 5/361 (1%)
Frame = +3
Query: 261 MNAARTGYRVFSANSTAACTELAKRITERLGAELGKSVVYQETNGETRVEIKESVRGQDI 440
MN + G +FSANS ++C EL+K+I ERLG E+GK VYQE N ETRV+I+ESVRG+D+
Sbjct: 13 MNITKGGLVLFSANSNSSCMELSKKIAERLGVEMGKVQVYQEPNRETRVQIQESVRGKDV 72
Query: 441 FIIQTIPRDVNTAVMELLIMAYALKTACARNIIGVIPYFPYSKQSKMRKRGSIVCKLLAS 620
FIIQT+ +DVNT +MELLIM YA KT+CA++IIGVIPYFPYSKQ KMRKRGSIV KLLAS
Sbjct: 73 FIIQTVSKDVNTTIMELLIMVYACKTSCAKSIIGVIPYFPYSKQCKMRKRGSIVSKLLAS 132
Query: 621 MLAKAGLTHIITMDLHQKEIQGFFSFPVDNLRASPFLLQYIQEEIPNYRNAVIVAKSPDA 800
M+ KAGLTH+ITMDLHQKEIQGFF+ PVDNLRASPFLLQYIQEEIP+YRNAVIVAKSP +
Sbjct: 133 MMCKAGLTHLITMDLHQKEIQGFFNIPVDNLRASPFLLQYIQEEIPDYRNAVIVAKSPAS 192
Query: 801 AKRAQSYAERLRLGLAVIHGEAQCAELDMDDGRHSPPMVKNATVHPGLELP-----LMMA 965
AKRAQS+AERLRLG+AVIHGEAQ AE D+ DGRHSPPM + + P L++
Sbjct: 193 AKRAQSFAERLRLGIAVIHGEAQDAESDLVDGRHSPPMDSKSETYESRGKPVHTAFLLIP 252
Query: 966 KEKPPITXXXXXXXXXXXXXXXXXXXXESFVAAAEILKERGAYKIYVMATHGILSAEAPR 1145
KEKPPIT +SF+AAAE LKERGAYKI+VMATHG+LS++APR
Sbjct: 253 KEKPPITVVGDVGGRIAIIVDDIIDDVDSFLAAAETLKERGAYKIFVMATHGLLSSDAPR 312
Query: 1146 LIEESSIDEVVVTNTVPHEVQKLQCPKIKTVDISLILSEAIRRIHNGESMAYLFRNITVD 1325
LIEES+IDEVVVTNT+PHE+QKLQCPKIKTVDIS+ILSEAIRRIHNGESM+YLFRNI +D
Sbjct: 313 LIEESAIDEVVVTNTIPHEIQKLQCPKIKTVDISMILSEAIRRIHNGESMSYLFRNIGLD 372
Query: 1326 D 1328
D
Sbjct: 373 D 373
>ref|XP_864351.1| PREDICTED: similar to phosphoribosyl pyrophosphate
synthetase-associated protein 2 isoform 8 [Canis
familiaris].
Length = 363
Score = 499 bits (1284), Expect = e-141
Identities = 257/357 (71%), Positives = 296/357 (82%), Gaps = 1/357 (0%)
Frame = +3
Query: 261 MNAARTGYRVFSANSTAACTELAKRITERLGAELGKSVVYQETNGETRVEIKESVRGQDI 440
MN + G +FSANS ++C EL+K+I ERLG E+GK VYQE N ETRV+I+ESVRG+D+
Sbjct: 13 MNITKGGLVLFSANSNSSCMELSKKIAERLGVEMGKVQVYQEPNRETRVQIQESVRGKDV 72
Query: 441 FIIQTIPRDVNTAVMELLIMAYALKTACARNIIGVIPYFPYSKQSKMRKRGSIVCKLLAS 620
FIIQT+ +DVNT +MELLIM YA KT+CA++IIGVIPYFPYSKQ KMRKRGSIV KLLAS
Sbjct: 73 FIIQTVSKDVNTTIMELLIMVYACKTSCAKSIIGVIPYFPYSKQCKMRKRGSIVSKLLAS 132
Query: 621 MLAKAGLTHIITMDLHQKEIQGFFSFPVDNLRASPFLLQYIQEEIPNYRNAVIVAKSPDA 800
M+ KAGLTH+ITMDLHQKEIQGFF+ PVDNLRASPFLLQYIQEEIP+YRNAVIVAKSP +
Sbjct: 133 MMCKAGLTHLITMDLHQKEIQGFFNIPVDNLRASPFLLQYIQEEIPDYRNAVIVAKSPAS 192
Query: 801 AKRAQSYAERLRLGLAVIHGEAQCAELDMDDGRHSPPM-VKNATVHPGLELPLMMAKEKP 977
AKRAQS+AERLRLG+AVIHGEAQ AE D+ DGRHSPPM + + T P KEKP
Sbjct: 193 AKRAQSFAERLRLGIAVIHGEAQDAESDLVDGRHSPPMQLYHFTFLPA------KVKEKP 246
Query: 978 PITXXXXXXXXXXXXXXXXXXXXESFVAAAEILKERGAYKIYVMATHGILSAEAPRLIEE 1157
PIT +SF+AAAE LKERGAYKI+VMATHG+LS++APRLIEE
Sbjct: 247 PITVVGDVGGRIAIIVDDIIDDVDSFLAAAETLKERGAYKIFVMATHGLLSSDAPRLIEE 306
Query: 1158 SSIDEVVVTNTVPHEVQKLQCPKIKTVDISLILSEAIRRIHNGESMAYLFRNITVDD 1328
S+IDEVVVTNT+PHE+QKLQCPKIKTVDIS+ILSEAIRRIHNGESM+YLFRNI +DD
Sbjct: 307 SAIDEVVVTNTIPHEIQKLQCPKIKTVDISMILSEAIRRIHNGESMSYLFRNIGLDD 363
>ref|XP_864326.1| PREDICTED: similar to phosphoribosyl pyrophosphate
synthetase-associated protein 2 isoform 7 [Canis
familiaris].
Length = 401
Score = 496 bits (1277), Expect = e-140
Identities = 260/391 (66%), Positives = 301/391 (76%), Gaps = 35/391 (8%)
Frame = +3
Query: 261 MNAARTGYRVFSANSTAACTELAKRITERLGAELGKSVVYQETNGETRVEIKESVRGQDI 440
MN + G +FSANS ++C EL+K+I ERLG E+GK VYQE N ETRV+I+ESVRG+D+
Sbjct: 13 MNITKGGLVLFSANSNSSCMELSKKIAERLGVEMGKVQVYQEPNRETRVQIQESVRGKDV 72
Query: 441 FIIQTIPRDVNTAVMELLIMAYALKTACARNIIGVIPYFPYSKQSKMRKRGSIVCKLLAS 620
FIIQT+ +DVNT +MELLIM YA KT+CA++IIGVIPYFPYSKQ KMRKRGSIV KLLAS
Sbjct: 73 FIIQTVSKDVNTTIMELLIMVYACKTSCAKSIIGVIPYFPYSKQCKMRKRGSIVSKLLAS 132
Query: 621 MLAKAGLTHIITMDLHQKEIQGFFSFPVDNLRASPFLLQYIQEEIPNYRNAVIVAKSPDA 800
M+ KAGLTH+ITMDLHQKEIQGFF+ PVDNLRASPFLLQYIQEEIP+YRNAVIVAKSP +
Sbjct: 133 MMCKAGLTHLITMDLHQKEIQGFFNIPVDNLRASPFLLQYIQEEIPDYRNAVIVAKSPAS 192
Query: 801 AKRAQSYAERLRLGLAVIHGEAQCAELDMDDGRHSPPMV--------------------- 917
AKRAQS+AERLRLG+AVIHGEAQ AE D+ DGRHSPPMV
Sbjct: 193 AKRAQSFAERLRLGIAVIHGEAQDAESDLVDGRHSPPMVLVRSGCQGGSWEACVWPERER 252
Query: 918 --------------KNATVHPGLELPLMMAKEKPPITXXXXXXXXXXXXXXXXXXXXESF 1055
N + PG P+++ KEKPPIT +SF
Sbjct: 253 QRQRQREKQTPCREPNVGLDPG--SPVLIPKEKPPITVVGDVGGRIAIIVDDIIDDVDSF 310
Query: 1056 VAAAEILKERGAYKIYVMATHGILSAEAPRLIEESSIDEVVVTNTVPHEVQKLQCPKIKT 1235
+AAAE LKERGAYKI+VMATHG+LS++APRLIEES+IDEVVVTNT+PHE+QKLQCPKIKT
Sbjct: 311 LAAAETLKERGAYKIFVMATHGLLSSDAPRLIEESAIDEVVVTNTIPHEIQKLQCPKIKT 370
Query: 1236 VDISLILSEAIRRIHNGESMAYLFRNITVDD 1328
VDIS+ILSEAIRRIHNGESM+YLFRNI +DD
Sbjct: 371 VDISMILSEAIRRIHNGESMSYLFRNIGLDD 401
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 70,291,442
Number of extensions: 2062919
Number of successful extensions: 11507
Number of sequences better than 1.0e-05: 29
Number of HSP's gapped: 11422
Number of HSP's successfully gapped: 43
Length of query: 608
Length of database: 18,874,504
Length adjustment: 109
Effective length of query: 499
Effective length of database: 15,240,880
Effective search space: 7605199120
Effective search space used: 7605199120
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002404
(1825 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_002757.2| phosphoribosyl pyrophosphate synthase-associate... 645 0.0
Alignment gi|NP_002758.1| phosphoribosyl pyrophosphate synthase-associate... 521 e-148
Alignment gi|NP_001230865.1| phosphoribosyl pyrophosphate synthase-associ... 447 e-125
Alignment gi|NP_001230870.1| phosphoribosyl pyrophosphate synthase-associ... 429 e-120
Alignment gi|NP_001230871.1| phosphoribosyl pyrophosphate synthase-associ... 429 e-120
Alignment gi|NP_001230869.1| phosphoribosyl pyrophosphate synthase-associ... 414 e-115
Alignment gi|NP_002756.1| ribose-phosphate pyrophosphokinase 2 isoform 2 ... 234 3e-61
Alignment gi|NP_787082.1| ribose-phosphate pyrophosphokinase 3 [Homo sapi... 233 3e-61
Alignment gi|NP_001034180.1| ribose-phosphate pyrophosphokinase 2 isoform... 233 6e-61
Alignment gi|NP_002755.1| ribose-phosphate pyrophosphokinase 1 isoform 1 ... 231 2e-60
>ref|NP_002757.2| phosphoribosyl pyrophosphate synthase-associated protein 1 [Homo
sapiens].
Length = 385
Score = 645 bits (1664), Expect = 0.0
Identities = 334/356 (93%), Positives = 335/356 (94%)
Frame = +3
Query: 261 MNAARTGYRVFSANSTAACTELAKRITERLGAELGKSVVYQETNGETRVEIKESVRGQDI 440
MNAARTGYRVFSANSTAACTELAKRITERLGAELGKSVVYQETNGETRVEIKESVRGQDI
Sbjct: 30 MNAARTGYRVFSANSTAACTELAKRITERLGAELGKSVVYQETNGETRVEIKESVRGQDI 89
Query: 441 FIIQTIPRDVNTAVMELLIMAYALKTACARNIIGVIPYFPYSKQSKMRKRGSIVCKLLAS 620
FIIQTIPRDVNTAVMELLIMAYALKTACARNIIGVIPYFPYSKQSKMRKRGSIVCKLLAS
Sbjct: 90 FIIQTIPRDVNTAVMELLIMAYALKTACARNIIGVIPYFPYSKQSKMRKRGSIVCKLLAS 149
Query: 621 MLAKAGLTHIITMDLHQKEIQGFFSFPVDNLRASPFLLQYIQEEIPNYRNAVIVAKSPDA 800
MLAKAGLTHIITMDLHQKEIQGFFSFPVDNLRASPFLLQYIQEEIPNYRNAVIVAKSPDA
Sbjct: 150 MLAKAGLTHIITMDLHQKEIQGFFSFPVDNLRASPFLLQYIQEEIPNYRNAVIVAKSPDA 209
Query: 801 AKRAQSYAERLRLGLAVIHGEAQCAELDMDDGRHSPPMVKNATVHPGLELPLMMAKEKPP 980
AKRAQSYAERLRLGLAVIHGEAQC ELDMDDGRHSPPMVKNATVHPGLELPLMMAKEKPP
Sbjct: 210 AKRAQSYAERLRLGLAVIHGEAQCTELDMDDGRHSPPMVKNATVHPGLELPLMMAKEKPP 269
Query: 981 ITXXXXXXXXXXXXXXXXXXXXESFVAAAEILKERGAYKIYVMATHGILSAEAPRLIEES 1160
IT ESFVAAAEILKERGAYKIYVMATHGILSAEAPRLIEES
Sbjct: 270 ITVVGDVGGRIAIIVDDIIDDVESFVAAAEILKERGAYKIYVMATHGILSAEAPRLIEES 329
Query: 1161 SIDEVVVTNTVPHEVQKLQCPKIKTVDISLILSEAIRRIHNGESMAYLFRNITVDD 1328
S+DEVVVTNTVPHEVQKLQCPKIKTVDISLILSEAIRRIHNGESMAYLFRNITVDD
Sbjct: 330 SVDEVVVTNTVPHEVQKLQCPKIKTVDISLILSEAIRRIHNGESMAYLFRNITVDD 385
>ref|NP_002758.1| phosphoribosyl pyrophosphate synthase-associated protein 2 isoform 1
[Homo sapiens].
Length = 369
Score = 521 bits (1342), Expect = e-148
Identities = 262/357 (73%), Positives = 305/357 (85%), Gaps = 1/357 (0%)
Frame = +3
Query: 261 MNAARTGYRVFSANSTAACTELAKRITERLGAELGKSVVYQETNGETRVEIKESVRGQDI 440
MN + G +FSANS ++C EL+K+I ERLG E+GK VYQE N ETRV+I+ESVRG+D+
Sbjct: 13 MNITKGGLVLFSANSNSSCMELSKKIAERLGVEMGKVQVYQEPNRETRVQIQESVRGKDV 72
Query: 441 FIIQTIPRDVNTAVMELLIMAYALKTACARNIIGVIPYFPYSKQSKMRKRGSIVCKLLAS 620
FIIQT+ +DVNT +MELLIM YA KT+CA++IIGVIPYFPYSKQ KMRKRGSIV KLLAS
Sbjct: 73 FIIQTVSKDVNTTIMELLIMVYACKTSCAKSIIGVIPYFPYSKQCKMRKRGSIVSKLLAS 132
Query: 621 MLAKAGLTHIITMDLHQKEIQGFFSFPVDNLRASPFLLQYIQEEIPNYRNAVIVAKSPDA 800
M+ KAGLTH+ITMDLHQKEIQGFF+ PVDNLRASPFLLQYIQEEIP+YRNAVIVAKSP +
Sbjct: 133 MMCKAGLTHLITMDLHQKEIQGFFNIPVDNLRASPFLLQYIQEEIPDYRNAVIVAKSPAS 192
Query: 801 AKRAQSYAERLRLGLAVIHGEAQCAELDMDDGRHSPPMVKN-ATVHPGLELPLMMAKEKP 977
AKRAQS+AERLRLG+AVIHGEAQ AE D+ DGRHSPPMV++ A +HP LE+P+++ KEKP
Sbjct: 193 AKRAQSFAERLRLGIAVIHGEAQDAESDLVDGRHSPPMVRSVAAIHPSLEIPMLIPKEKP 252
Query: 978 PITXXXXXXXXXXXXXXXXXXXXESFVAAAEILKERGAYKIYVMATHGILSAEAPRLIEE 1157
PIT +SF+AAAE LKERGAYKI+VMATHG+LS++APR IEE
Sbjct: 253 PITVVGDVGGRIAIIVDDIIDDVDSFLAAAETLKERGAYKIFVMATHGLLSSDAPRRIEE 312
Query: 1158 SSIDEVVVTNTVPHEVQKLQCPKIKTVDISLILSEAIRRIHNGESMAYLFRNITVDD 1328
S+IDEVVVTNT+PHEVQKLQCPKIKTVDIS+ILSEAIRRIHNGESM+YLFRNI +DD
Sbjct: 313 SAIDEVVVTNTIPHEVQKLQCPKIKTVDISMILSEAIRRIHNGESMSYLFRNIGLDD 369
>ref|NP_001230865.1| phosphoribosyl pyrophosphate synthase-associated protein 2 isoform 2
[Homo sapiens].
Length = 329
Score = 447 bits (1150), Expect = e-125
Identities = 235/357 (65%), Positives = 271/357 (75%), Gaps = 1/357 (0%)
Frame = +3
Query: 261 MNAARTGYRVFSANSTAACTELAKRITERLGAELGKSVVYQETNGETRVEIKESVRGQDI 440
MN + G +FSANS ++C EL+K+I E
Sbjct: 13 MNITKGGLVLFSANSNSSCMELSKKIAE-------------------------------- 40
Query: 441 FIIQTIPRDVNTAVMELLIMAYALKTACARNIIGVIPYFPYSKQSKMRKRGSIVCKLLAS 620
DVNT +MELLIM YA KT+CA++IIGVIPYFPYSKQ KMRKRGSIV KLLAS
Sbjct: 41 --------DVNTTIMELLIMVYACKTSCAKSIIGVIPYFPYSKQCKMRKRGSIVSKLLAS 92
Query: 621 MLAKAGLTHIITMDLHQKEIQGFFSFPVDNLRASPFLLQYIQEEIPNYRNAVIVAKSPDA 800
M+ KAGLTH+ITMDLHQKEIQGFF+ PVDNLRASPFLLQYIQEEIP+YRNAVIVAKSP +
Sbjct: 93 MMCKAGLTHLITMDLHQKEIQGFFNIPVDNLRASPFLLQYIQEEIPDYRNAVIVAKSPAS 152
Query: 801 AKRAQSYAERLRLGLAVIHGEAQCAELDMDDGRHSPPMVKN-ATVHPGLELPLMMAKEKP 977
AKRAQS+AERLRLG+AVIHGEAQ AE D+ DGRHSPPMV++ A +HP LE+P+++ KEKP
Sbjct: 153 AKRAQSFAERLRLGIAVIHGEAQDAESDLVDGRHSPPMVRSVAAIHPSLEIPMLIPKEKP 212
Query: 978 PITXXXXXXXXXXXXXXXXXXXXESFVAAAEILKERGAYKIYVMATHGILSAEAPRLIEE 1157
PIT +SF+AAAE LKERGAYKI+VMATHG+LS++APR IEE
Sbjct: 213 PITVVGDVGGRIAIIVDDIIDDVDSFLAAAETLKERGAYKIFVMATHGLLSSDAPRRIEE 272
Query: 1158 SSIDEVVVTNTVPHEVQKLQCPKIKTVDISLILSEAIRRIHNGESMAYLFRNITVDD 1328
S+IDEVVVTNT+PHEVQKLQCPKIKTVDIS+ILSEAIRRIHNGESM+YLFRNI +DD
Sbjct: 273 SAIDEVVVTNTIPHEVQKLQCPKIKTVDISMILSEAIRRIHNGESMSYLFRNIGLDD 329
>ref|NP_001230870.1| phosphoribosyl pyrophosphate synthase-associated protein 2 isoform 4
[Homo sapiens].
Length = 283
Score = 429 bits (1104), Expect = e-120
Identities = 217/283 (76%), Positives = 246/283 (86%), Gaps = 1/283 (0%)
Frame = +3
Query: 483 MELLIMAYALKTACARNIIGVIPYFPYSKQSKMRKRGSIVCKLLASMLAKAGLTHIITMD 662
MELLIM YA KT+CA++IIGVIPYFPYSKQ KMRKRGSIV KLLASM+ KAGLTH+ITMD
Sbjct: 1 MELLIMVYACKTSCAKSIIGVIPYFPYSKQCKMRKRGSIVSKLLASMMCKAGLTHLITMD 60
Query: 663 LHQKEIQGFFSFPVDNLRASPFLLQYIQEEIPNYRNAVIVAKSPDAAKRAQSYAERLRLG 842
LHQKEIQGFF+ PVDNLRASPFLLQYIQEEIP+YRNAVIVAKSP +AKRAQS+AERLRLG
Sbjct: 61 LHQKEIQGFFNIPVDNLRASPFLLQYIQEEIPDYRNAVIVAKSPASAKRAQSFAERLRLG 120
Query: 843 LAVIHGEAQCAELDMDDGRHSPPMVKN-ATVHPGLELPLMMAKEKPPITXXXXXXXXXXX 1019
+AVIHGEAQ AE D+ DGRHSPPMV++ A +HP LE+P+++ KEKPPIT
Sbjct: 121 IAVIHGEAQDAESDLVDGRHSPPMVRSVAAIHPSLEIPMLIPKEKPPITVVGDVGGRIAI 180
Query: 1020 XXXXXXXXXESFVAAAEILKERGAYKIYVMATHGILSAEAPRLIEESSIDEVVVTNTVPH 1199
+SF+AAAE LKERGAYKI+VMATHG+LS++APR IEES+IDEVVVTNT+PH
Sbjct: 181 IVDDIIDDVDSFLAAAETLKERGAYKIFVMATHGLLSSDAPRRIEESAIDEVVVTNTIPH 240
Query: 1200 EVQKLQCPKIKTVDISLILSEAIRRIHNGESMAYLFRNITVDD 1328
EVQKLQCPKIKTVDIS+ILSEAIRRIHNGESM+YLFRNI +DD
Sbjct: 241 EVQKLQCPKIKTVDISMILSEAIRRIHNGESMSYLFRNIGLDD 283
>ref|NP_001230871.1| phosphoribosyl pyrophosphate synthase-associated protein 2 isoform 5
[Homo sapiens].
Length = 283
Score = 429 bits (1104), Expect = e-120
Identities = 217/283 (76%), Positives = 246/283 (86%), Gaps = 1/283 (0%)
Frame = +3
Query: 483 MELLIMAYALKTACARNIIGVIPYFPYSKQSKMRKRGSIVCKLLASMLAKAGLTHIITMD 662
MELLIM YA KT+CA++IIGVIPYFPYSKQ KMRKRGSIV KLLASM+ KAGLTH+ITMD
Sbjct: 1 MELLIMVYACKTSCAKSIIGVIPYFPYSKQCKMRKRGSIVSKLLASMMCKAGLTHLITMD 60
Query: 663 LHQKEIQGFFSFPVDNLRASPFLLQYIQEEIPNYRNAVIVAKSPDAAKRAQSYAERLRLG 842
LHQKEIQGFF+ PVDNLRASPFLLQYIQEEIP+YRNAVIVAKSP +AKRAQS+AERLRLG
Sbjct: 61 LHQKEIQGFFNIPVDNLRASPFLLQYIQEEIPDYRNAVIVAKSPASAKRAQSFAERLRLG 120
Query: 843 LAVIHGEAQCAELDMDDGRHSPPMVKN-ATVHPGLELPLMMAKEKPPITXXXXXXXXXXX 1019
+AVIHGEAQ AE D+ DGRHSPPMV++ A +HP LE+P+++ KEKPPIT
Sbjct: 121 IAVIHGEAQDAESDLVDGRHSPPMVRSVAAIHPSLEIPMLIPKEKPPITVVGDVGGRIAI 180
Query: 1020 XXXXXXXXXESFVAAAEILKERGAYKIYVMATHGILSAEAPRLIEESSIDEVVVTNTVPH 1199
+SF+AAAE LKERGAYKI+VMATHG+LS++APR IEES+IDEVVVTNT+PH
Sbjct: 181 IVDDIIDDVDSFLAAAETLKERGAYKIFVMATHGLLSSDAPRRIEESAIDEVVVTNTIPH 240
Query: 1200 EVQKLQCPKIKTVDISLILSEAIRRIHNGESMAYLFRNITVDD 1328
EVQKLQCPKIKTVDIS+ILSEAIRRIHNGESM+YLFRNI +DD
Sbjct: 241 EVQKLQCPKIKTVDISMILSEAIRRIHNGESMSYLFRNIGLDD 283
>ref|NP_001230869.1| phosphoribosyl pyrophosphate synthase-associated protein 2 isoform 3
[Homo sapiens].
Length = 320
Score = 414 bits (1063), Expect = e-115
Identities = 221/357 (61%), Positives = 259/357 (72%), Gaps = 1/357 (0%)
Frame = +3
Query: 261 MNAARTGYRVFSANSTAACTELAKRITERLGAELGKSVVYQETNGETRVEIKESVRGQDI 440
MN + G +FSANS ++C EL+K+I ERLG E+GK VYQE N ETRV+I+ESVRG+D+
Sbjct: 13 MNITKGGLVLFSANSNSSCMELSKKIAERLGVEMGKVQVYQEPNRETRVQIQESVRGKDV 72
Query: 441 FIIQTIPRDVNTAVMELLIMAYALKTACARNIIGVIPYFPYSKQSKMRKRGSIVCKLLAS 620
FIIQT+ +DVNT +MELLIM YA KT+CA++IIGVIPYFPYSKQ KMRKRGSIV KLLAS
Sbjct: 73 FIIQTVSKDVNTTIMELLIMVYACKTSCAKSIIGVIPYFPYSKQCKMRKRGSIVSKLLAS 132
Query: 621 MLAKAGLTHIITMDLHQKEIQGFFSFPVDNLRASPFLLQYIQEEIPNYRNAVIVAKSPDA 800
M+ KAGLTH+ITMDLHQKEIQGFF+ PVDNLRASPFLLQYIQEEIP+YRNAVIVAKSP +
Sbjct: 133 MMCKAGLTHLITMDLHQKEIQGFFNIPVDNLRASPFLLQYIQEEIPDYRNAVIVAKSPAS 192
Query: 801 AKRAQSYAERLRLGLAVIHGEAQCAELDMDDGRHSPPMVKN-ATVHPGLELPLMMAKEKP 977
AKRAQS+AERLRLG+AVIHGEAQ AE D+ DGRHSPPMV++ A +HP LE+P+++ KEKP
Sbjct: 193 AKRAQSFAERLRLGIAVIHGEAQDAESDLVDGRHSPPMVRSVAAIHPSLEIPMLIPKEKP 252
Query: 978 PITXXXXXXXXXXXXXXXXXXXXESFVAAAEILKERGAYKIYVMATHGILSAEAPRLIEE 1157
PIT G I V+ + E +
Sbjct: 253 PITVVGDVG---------------------------GRIAIIVVVVTNTIPHEVQK---- 281
Query: 1158 SSIDEVVVTNTVPHEVQKLQCPKIKTVDISLILSEAIRRIHNGESMAYLFRNITVDD 1328
LQCPKIKTVDIS+ILSEAIRRIHNGESM+YLFRNI +DD
Sbjct: 282 ------------------LQCPKIKTVDISMILSEAIRRIHNGESMSYLFRNIGLDD 320
>ref|NP_002756.1| ribose-phosphate pyrophosphokinase 2 isoform 2 [Homo sapiens].
Length = 318
Score = 234 bits (596), Expect = 3e-61
Identities = 143/334 (42%), Positives = 196/334 (58%), Gaps = 2/334 (0%)
Frame = +3
Query: 321 ELAKRITERLGAELGKSVVYQETNGETRVEIKESVRGQDIFIIQTIPRDVNTAVMELLIM 500
+L++R+ +RLG ELGK V + +N ET VEI ESVRG+D++IIQ+ ++N +MELLIM
Sbjct: 14 DLSQRVADRLGLELGKVVTKKFSNQETSVEIGESVRGEDVYIIQSGCGEINDNLMELLIM 73
Query: 501 AYALKTACARNIIGVIPYFPYSKQSKMRK-RGSIVCKLLASMLAKAGLTHIITMDLHQKE 677
A K A + + VIP FPY++Q K K R I KL+A+ML+ AG HIITMDLH +
Sbjct: 74 INACKIASSSRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAGADHIITMDLHASQ 133
Query: 678 IQGFFSFPVDNLRASPFLLQYIQEEIPNYRNAVIVAKSPDAAKRAQSYAERLRLGLAVIH 857
IQGFF PVDNL A P +LQ+I+E I ++N +IV+ AKR S A+RL + A+IH
Sbjct: 134 IQGFFDIPVDNLYAEPAVLQWIRENIAEWKNCIIVSPDAGGAKRVTSIADRLNVEFALIH 193
Query: 858 GEAQCA-ELDMDDGRHSPPMVKNATVHPGLELPLMMAKEKPPITXXXXXXXXXXXXXXXX 1034
E + A E+D MV V K++ I
Sbjct: 194 KERKKANEVDR--------MVLVGDV-----------KDRVAILVDDMADTCG------- 227
Query: 1035 XXXXESFVAAAEILKERGAYKIYVMATHGILSAEAPRLIEESSIDEVVVTNTVPHEVQKL 1214
+ AA+ L GA K+Y + THGI S A I ++ + VVVTNT+P E +
Sbjct: 228 -----TICHAADKLLSAGATKVYAILTHGIFSGPAISRINNAAFEAVVVTNTIPQEDKMK 282
Query: 1215 QCPKIKTVDISLILSEAIRRIHNGESMAYLFRNI 1316
C KI+ +DIS+IL+EAIRR HNGES++YLF ++
Sbjct: 283 HCTKIQVIDISMILAEAIRRTHNGESVSYLFSHV 316
>ref|NP_787082.1| ribose-phosphate pyrophosphokinase 3 [Homo sapiens].
Length = 318
Score = 233 bits (595), Expect = 3e-61
Identities = 138/345 (40%), Positives = 195/345 (56%), Gaps = 1/345 (0%)
Frame = +3
Query: 285 RVFSANSTAACTELAKRITERLGAELGKSVVYQETNGETRVEIKESVRGQDIFIIQTIPR 464
++FS +S +L+++I +RLG ELGK V + +N ET VEI ESVRG+D++I+Q+
Sbjct: 5 KIFSGSSHQ---DLSQKIADRLGLELGKVVTKKFSNQETCVEIDESVRGEDVYIVQSGCG 61
Query: 465 DVNTAVMELLIMAYALKTACARNIIGVIPYFPYSKQSKMRK-RGSIVCKLLASMLAKAGL 641
++N ++MELLIM A K A A + VIP FPY++Q K K R I KL+A+ML+ AG
Sbjct: 62 EINDSLMELLIMINACKIASASRVTAVIPCFPYARQDKKDKSRSPISAKLVANMLSIAGA 121
Query: 642 THIITMDLHQKEIQGFFSFPVDNLRASPFLLQYIQEEIPNYRNAVIVAKSPDAAKRAQSY 821
HIITMDLH +IQGFF PVDNL A P +L++I+E IP ++N +IV+ AKR S
Sbjct: 122 DHIITMDLHASQIQGFFDIPVDNLYAEPTVLKWIRENIPEWKNCIIVSPDAGGAKRVTSI 181
Query: 822 AERLRLGLAVIHGEAQCAELDMDDGRHSPPMVKNATVHPGLELPLMMAKEKPPITXXXXX 1001
A++L + A+IH E + A E I
Sbjct: 182 ADQLNVDFALIHKERK------------------------------KANEVDCIVLVGDV 211
Query: 1002 XXXXXXXXXXXXXXXESFVAAAEILKERGAYKIYVMATHGILSAEAPRLIEESSIDEVVV 1181
+ AA+ L GA ++Y + THGI S A I + + VVV
Sbjct: 212 NDRVAILVDDMADTCVTICLAADKLLSAGATRVYAILTHGIFSGPAISRINTACFEAVVV 271
Query: 1182 TNTVPHEVQKLQCPKIKTVDISLILSEAIRRIHNGESMAYLFRNI 1316
TNT+P + + C KI+ +DIS+IL+EAIRR HNGES++YLF ++
Sbjct: 272 TNTIPQDEKMKHCSKIRVIDISMILAEAIRRTHNGESVSYLFSHV 316
>ref|NP_001034180.1| ribose-phosphate pyrophosphokinase 2 isoform 1 [Homo sapiens].
Length = 321
Score = 233 bits (593), Expect = 6e-61
Identities = 143/337 (42%), Positives = 196/337 (58%), Gaps = 5/337 (1%)
Frame = +3
Query: 321 ELAKRITERLGAELGKSVVYQETNGETRVEIKESVRGQDIFIIQTIPRDVNTAVMELLIM 500
+L++R+ +RLG ELGK V + +N ET VEI ESVRG+D++IIQ+ ++N +MELLIM
Sbjct: 14 DLSQRVADRLGLELGKVVTKKFSNQETSVEIGESVRGEDVYIIQSGCGEINDNLMELLIM 73
Query: 501 AYALKTACARNIIGVIPYFPYSKQSKMRK----RGSIVCKLLASMLAKAGLTHIITMDLH 668
A K A + + VIP FPY++Q K K R I KL+A+ML+ AG HIITMDLH
Sbjct: 74 INACKIASSSRVTAVIPCFPYARQDKKDKVGESRAPISAKLVANMLSVAGADHIITMDLH 133
Query: 669 QKEIQGFFSFPVDNLRASPFLLQYIQEEIPNYRNAVIVAKSPDAAKRAQSYAERLRLGLA 848
+IQGFF PVDNL A P +LQ+I+E I ++N +IV+ AKR S A+RL + A
Sbjct: 134 ASQIQGFFDIPVDNLYAEPAVLQWIRENIAEWKNCIIVSPDAGGAKRVTSIADRLNVEFA 193
Query: 849 VIHGEAQCA-ELDMDDGRHSPPMVKNATVHPGLELPLMMAKEKPPITXXXXXXXXXXXXX 1025
+IH E + A E+D MV V K++ I
Sbjct: 194 LIHKERKKANEVDR--------MVLVGDV-----------KDRVAILVDDMADTCG---- 230
Query: 1026 XXXXXXXESFVAAAEILKERGAYKIYVMATHGILSAEAPRLIEESSIDEVVVTNTVPHEV 1205
+ AA+ L GA K+Y + THGI S A I ++ + VVVTNT+P E
Sbjct: 231 --------TICHAADKLLSAGATKVYAILTHGIFSGPAISRINNAAFEAVVVTNTIPQED 282
Query: 1206 QKLQCPKIKTVDISLILSEAIRRIHNGESMAYLFRNI 1316
+ C KI+ +DIS+IL+EAIRR HNGES++YLF ++
Sbjct: 283 KMKHCTKIQVIDISMILAEAIRRTHNGESVSYLFSHV 319
>ref|NP_002755.1| ribose-phosphate pyrophosphokinase 1 isoform 1 [Homo sapiens].
Length = 318
Score = 231 bits (589), Expect = 2e-60
Identities = 145/346 (41%), Positives = 200/346 (57%), Gaps = 2/346 (0%)
Frame = +3
Query: 285 RVFSANSTAACTELAKRITERLGAELGKSVVYQETNGETRVEIKESVRGQDIFIIQTIPR 464
++FS +S +L+++I +RLG ELGK V + +N ET VEI ESVRG+D++I+Q+
Sbjct: 5 KIFSGSSHQ---DLSQKIADRLGLELGKVVTKKFSNQETCVEIGESVRGEDVYIVQSGCG 61
Query: 465 DVNTAVMELLIMAYALKTACARNIIGVIPYFPYSKQSKMRK-RGSIVCKLLASMLAKAGL 641
++N +MELLIM A K A A + VIP FPY++Q K K R I KL+A+ML+ AG
Sbjct: 62 EINDNLMELLIMINACKIASASRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAGA 121
Query: 642 THIITMDLHQKEIQGFFSFPVDNLRASPFLLQYIQEEIPNYRNAVIVAKSPDAAKRAQSY 821
HIITMDLH +IQGFF PVDNL A P +L++I+E I +RN IV+ AKR S
Sbjct: 122 DHIITMDLHASQIQGFFDIPVDNLYAEPAVLKWIRENISEWRNCTIVSPDAGGAKRVTSI 181
Query: 822 AERLRLGLAVIHGEAQCA-ELDMDDGRHSPPMVKNATVHPGLELPLMMAKEKPPITXXXX 998
A+RL + A+IH E + A E+D MV V K++ I
Sbjct: 182 ADRLNVDFALIHKERKKANEVDR--------MVLVGDV-----------KDRVAILVDDM 222
Query: 999 XXXXXXXXXXXXXXXXESFVAAAEILKERGAYKIYVMATHGILSAEAPRLIEESSIDEVV 1178
+ AA+ L GA ++Y + THGI S A I + + VV
Sbjct: 223 ADTCG------------TICHAADKLLSAGATRVYAILTHGIFSGPAISRINNACFEAVV 270
Query: 1179 VTNTVPHEVQKLQCPKIKTVDISLILSEAIRRIHNGESMAYLFRNI 1316
VTNT+P E + C KI+ +DIS+IL+EAIRR HNGES++YLF ++
Sbjct: 271 VTNTIPQEDKMKHCSKIQVIDISMILAEAIRRTHNGESVSYLFSHV 316
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 68,417,360
Number of extensions: 1983722
Number of successful extensions: 10267
Number of sequences better than 1.0e-05: 11
Number of HSP's gapped: 10206
Number of HSP's successfully gapped: 17
Length of query: 608
Length of database: 18,297,164
Length adjustment: 108
Effective length of query: 500
Effective length of database: 14,737,052
Effective search space: 7368526000
Effective search space used: 7368526000
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002404
(1825 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_080640.1| phosphoribosyl pyrophosphate synthase-associate... 642 0.0
Alignment gi|NP_001157714.1| phosphoribosyl pyrophosphate synthase-associ... 523 e-148
Alignment gi|NP_659055.1| phosphoribosyl pyrophosphate synthase-associate... 523 e-148
Alignment gi|NP_001157716.1| phosphoribosyl pyrophosphate synthase-associ... 431 e-121
Alignment gi|NP_001157715.1| phosphoribosyl pyrophosphate synthase-associ... 431 e-121
Alignment gi|NP_080938.1| ribose-phosphate pyrophosphokinase 2 [Mus muscu... 235 1e-61
Alignment gi|NP_001032835.2| hypothetical protein LOC328099 [Mus musculus]. 231 1e-60
Alignment gi|NP_067438.1| ribose-phosphate pyrophosphokinase 1 [Mus muscu... 231 1e-60
Alignment gi|NP_083570.1| phosphoribosyl pyrophosphate synthetase 1-like ... 231 2e-60
>ref|NP_080640.1| phosphoribosyl pyrophosphate synthase-associated protein 1 [Mus
musculus].
Length = 385
Score = 642 bits (1657), Expect = 0.0
Identities = 333/356 (93%), Positives = 334/356 (93%)
Frame = +3
Query: 261 MNAARTGYRVFSANSTAACTELAKRITERLGAELGKSVVYQETNGETRVEIKESVRGQDI 440
MNAARTGYRVFSANSTAACTELAKRITERLGAELGKSVVYQETNGETRVEIKESVRGQDI
Sbjct: 30 MNAARTGYRVFSANSTAACTELAKRITERLGAELGKSVVYQETNGETRVEIKESVRGQDI 89
Query: 441 FIIQTIPRDVNTAVMELLIMAYALKTACARNIIGVIPYFPYSKQSKMRKRGSIVCKLLAS 620
FIIQTIPRDVNTAVMELLIMAYALKTACARNIIGVIPYFPYSKQSKMRKRGSIVCKLLAS
Sbjct: 90 FIIQTIPRDVNTAVMELLIMAYALKTACARNIIGVIPYFPYSKQSKMRKRGSIVCKLLAS 149
Query: 621 MLAKAGLTHIITMDLHQKEIQGFFSFPVDNLRASPFLLQYIQEEIPNYRNAVIVAKSPDA 800
MLAKAGLTHIITMDLHQKEIQGFFSFPVDNLRASPFLLQYIQEEIPNYRNAVIVAKSPDA
Sbjct: 150 MLAKAGLTHIITMDLHQKEIQGFFSFPVDNLRASPFLLQYIQEEIPNYRNAVIVAKSPDA 209
Query: 801 AKRAQSYAERLRLGLAVIHGEAQCAELDMDDGRHSPPMVKNATVHPGLELPLMMAKEKPP 980
AKRAQSYAERLRLGLAVIHGEAQC ELDMDDGRHSPPMVKNATVHPGLELPLMMAKEKPP
Sbjct: 210 AKRAQSYAERLRLGLAVIHGEAQCTELDMDDGRHSPPMVKNATVHPGLELPLMMAKEKPP 269
Query: 981 ITXXXXXXXXXXXXXXXXXXXXESFVAAAEILKERGAYKIYVMATHGILSAEAPRLIEES 1160
IT ESFVAAAEILKERGAYKIYVMATHGILSAEAPRLIEES
Sbjct: 270 ITVVGDVGGRIAIIVDDIIDDVESFVAAAEILKERGAYKIYVMATHGILSAEAPRLIEES 329
Query: 1161 SIDEVVVTNTVPHEVQKLQCPKIKTVDISLILSEAIRRIHNGESMAYLFRNITVDD 1328
IDEVVVTNTVPHE+QKLQCPKIKTVDISLILSEAIRRIHNGESMAYLFRNITVDD
Sbjct: 330 PIDEVVVTNTVPHELQKLQCPKIKTVDISLILSEAIRRIHNGESMAYLFRNITVDD 385
>ref|NP_001157714.1| phosphoribosyl pyrophosphate synthase-associated protein 2 isoform a
[Mus musculus].
Length = 369
Score = 523 bits (1348), Expect = e-148
Identities = 263/357 (73%), Positives = 306/357 (85%), Gaps = 1/357 (0%)
Frame = +3
Query: 261 MNAARTGYRVFSANSTAACTELAKRITERLGAELGKSVVYQETNGETRVEIKESVRGQDI 440
MN + G +FSANS ++C EL+K+I ERLG E+GK VYQE N ETRV+I+ESVRG+D+
Sbjct: 13 MNITKGGLVLFSANSNSSCMELSKKIAERLGVEMGKVQVYQEPNRETRVQIQESVRGKDV 72
Query: 441 FIIQTIPRDVNTAVMELLIMAYALKTACARNIIGVIPYFPYSKQSKMRKRGSIVCKLLAS 620
FIIQTI +DVNT +MELLIM YA KT+CA++IIGVIPYFPYSKQ KMRKRGSIV KLLAS
Sbjct: 73 FIIQTISKDVNTTIMELLIMVYACKTSCAKSIIGVIPYFPYSKQCKMRKRGSIVSKLLAS 132
Query: 621 MLAKAGLTHIITMDLHQKEIQGFFSFPVDNLRASPFLLQYIQEEIPNYRNAVIVAKSPDA 800
M+ KAGLTH+ITMDLHQKEIQGFF+ PVDNLRASPFLLQYIQEEIP+YRNAVIVAKSP +
Sbjct: 133 MMCKAGLTHLITMDLHQKEIQGFFNIPVDNLRASPFLLQYIQEEIPDYRNAVIVAKSPAS 192
Query: 801 AKRAQSYAERLRLGLAVIHGEAQCAELDMDDGRHSPPMVKN-ATVHPGLELPLMMAKEKP 977
AKRAQS+AERLRLG+AVIHGEAQ AE D+ DGRHSPPMV++ A +HP LE+P+++ KEKP
Sbjct: 193 AKRAQSFAERLRLGIAVIHGEAQDAESDLVDGRHSPPMVRSVAAIHPSLEIPMLIPKEKP 252
Query: 978 PITXXXXXXXXXXXXXXXXXXXXESFVAAAEILKERGAYKIYVMATHGILSAEAPRLIEE 1157
PIT +SF+AAAE LKERGAYKI+VMATHG+LS++APRLIEE
Sbjct: 253 PITVVGDVGGRIAIIVDDIIDDVDSFLAAAETLKERGAYKIFVMATHGLLSSDAPRLIEE 312
Query: 1158 SSIDEVVVTNTVPHEVQKLQCPKIKTVDISLILSEAIRRIHNGESMAYLFRNITVDD 1328
S+IDEVVVTNT+PHE+QKLQCPKIKTVDIS+ILSEAIRRIHNGESM+YLFRNI +DD
Sbjct: 313 SAIDEVVVTNTIPHEIQKLQCPKIKTVDISMILSEAIRRIHNGESMSYLFRNIGLDD 369
>ref|NP_659055.1| phosphoribosyl pyrophosphate synthase-associated protein 2 isoform a
[Mus musculus].
Length = 369
Score = 523 bits (1348), Expect = e-148
Identities = 263/357 (73%), Positives = 306/357 (85%), Gaps = 1/357 (0%)
Frame = +3
Query: 261 MNAARTGYRVFSANSTAACTELAKRITERLGAELGKSVVYQETNGETRVEIKESVRGQDI 440
MN + G +FSANS ++C EL+K+I ERLG E+GK VYQE N ETRV+I+ESVRG+D+
Sbjct: 13 MNITKGGLVLFSANSNSSCMELSKKIAERLGVEMGKVQVYQEPNRETRVQIQESVRGKDV 72
Query: 441 FIIQTIPRDVNTAVMELLIMAYALKTACARNIIGVIPYFPYSKQSKMRKRGSIVCKLLAS 620
FIIQTI +DVNT +MELLIM YA KT+CA++IIGVIPYFPYSKQ KMRKRGSIV KLLAS
Sbjct: 73 FIIQTISKDVNTTIMELLIMVYACKTSCAKSIIGVIPYFPYSKQCKMRKRGSIVSKLLAS 132
Query: 621 MLAKAGLTHIITMDLHQKEIQGFFSFPVDNLRASPFLLQYIQEEIPNYRNAVIVAKSPDA 800
M+ KAGLTH+ITMDLHQKEIQGFF+ PVDNLRASPFLLQYIQEEIP+YRNAVIVAKSP +
Sbjct: 133 MMCKAGLTHLITMDLHQKEIQGFFNIPVDNLRASPFLLQYIQEEIPDYRNAVIVAKSPAS 192
Query: 801 AKRAQSYAERLRLGLAVIHGEAQCAELDMDDGRHSPPMVKN-ATVHPGLELPLMMAKEKP 977
AKRAQS+AERLRLG+AVIHGEAQ AE D+ DGRHSPPMV++ A +HP LE+P+++ KEKP
Sbjct: 193 AKRAQSFAERLRLGIAVIHGEAQDAESDLVDGRHSPPMVRSVAAIHPSLEIPMLIPKEKP 252
Query: 978 PITXXXXXXXXXXXXXXXXXXXXESFVAAAEILKERGAYKIYVMATHGILSAEAPRLIEE 1157
PIT +SF+AAAE LKERGAYKI+VMATHG+LS++APRLIEE
Sbjct: 253 PITVVGDVGGRIAIIVDDIIDDVDSFLAAAETLKERGAYKIFVMATHGLLSSDAPRLIEE 312
Query: 1158 SSIDEVVVTNTVPHEVQKLQCPKIKTVDISLILSEAIRRIHNGESMAYLFRNITVDD 1328
S+IDEVVVTNT+PHE+QKLQCPKIKTVDIS+ILSEAIRRIHNGESM+YLFRNI +DD
Sbjct: 313 SAIDEVVVTNTIPHEIQKLQCPKIKTVDISMILSEAIRRIHNGESMSYLFRNIGLDD 369
>ref|NP_001157716.1| phosphoribosyl pyrophosphate synthase-associated protein 2 isoform b
[Mus musculus].
Length = 283
Score = 431 bits (1109), Expect = e-121
Identities = 217/283 (76%), Positives = 247/283 (87%), Gaps = 1/283 (0%)
Frame = +3
Query: 483 MELLIMAYALKTACARNIIGVIPYFPYSKQSKMRKRGSIVCKLLASMLAKAGLTHIITMD 662
MELLIM YA KT+CA++IIGVIPYFPYSKQ KMRKRGSIV KLLASM+ KAGLTH+ITMD
Sbjct: 1 MELLIMVYACKTSCAKSIIGVIPYFPYSKQCKMRKRGSIVSKLLASMMCKAGLTHLITMD 60
Query: 663 LHQKEIQGFFSFPVDNLRASPFLLQYIQEEIPNYRNAVIVAKSPDAAKRAQSYAERLRLG 842
LHQKEIQGFF+ PVDNLRASPFLLQYIQEEIP+YRNAVIVAKSP +AKRAQS+AERLRLG
Sbjct: 61 LHQKEIQGFFNIPVDNLRASPFLLQYIQEEIPDYRNAVIVAKSPASAKRAQSFAERLRLG 120
Query: 843 LAVIHGEAQCAELDMDDGRHSPPMVKN-ATVHPGLELPLMMAKEKPPITXXXXXXXXXXX 1019
+AVIHGEAQ AE D+ DGRHSPPMV++ A +HP LE+P+++ KEKPPIT
Sbjct: 121 IAVIHGEAQDAESDLVDGRHSPPMVRSVAAIHPSLEIPMLIPKEKPPITVVGDVGGRIAI 180
Query: 1020 XXXXXXXXXESFVAAAEILKERGAYKIYVMATHGILSAEAPRLIEESSIDEVVVTNTVPH 1199
+SF+AAAE LKERGAYKI+VMATHG+LS++APRLIEES+IDEVVVTNT+PH
Sbjct: 181 IVDDIIDDVDSFLAAAETLKERGAYKIFVMATHGLLSSDAPRLIEESAIDEVVVTNTIPH 240
Query: 1200 EVQKLQCPKIKTVDISLILSEAIRRIHNGESMAYLFRNITVDD 1328
E+QKLQCPKIKTVDIS+ILSEAIRRIHNGESM+YLFRNI +DD
Sbjct: 241 EIQKLQCPKIKTVDISMILSEAIRRIHNGESMSYLFRNIGLDD 283
>ref|NP_001157715.1| phosphoribosyl pyrophosphate synthase-associated protein 2 isoform b
[Mus musculus].
Length = 283
Score = 431 bits (1109), Expect = e-121
Identities = 217/283 (76%), Positives = 247/283 (87%), Gaps = 1/283 (0%)
Frame = +3
Query: 483 MELLIMAYALKTACARNIIGVIPYFPYSKQSKMRKRGSIVCKLLASMLAKAGLTHIITMD 662
MELLIM YA KT+CA++IIGVIPYFPYSKQ KMRKRGSIV KLLASM+ KAGLTH+ITMD
Sbjct: 1 MELLIMVYACKTSCAKSIIGVIPYFPYSKQCKMRKRGSIVSKLLASMMCKAGLTHLITMD 60
Query: 663 LHQKEIQGFFSFPVDNLRASPFLLQYIQEEIPNYRNAVIVAKSPDAAKRAQSYAERLRLG 842
LHQKEIQGFF+ PVDNLRASPFLLQYIQEEIP+YRNAVIVAKSP +AKRAQS+AERLRLG
Sbjct: 61 LHQKEIQGFFNIPVDNLRASPFLLQYIQEEIPDYRNAVIVAKSPASAKRAQSFAERLRLG 120
Query: 843 LAVIHGEAQCAELDMDDGRHSPPMVKN-ATVHPGLELPLMMAKEKPPITXXXXXXXXXXX 1019
+AVIHGEAQ AE D+ DGRHSPPMV++ A +HP LE+P+++ KEKPPIT
Sbjct: 121 IAVIHGEAQDAESDLVDGRHSPPMVRSVAAIHPSLEIPMLIPKEKPPITVVGDVGGRIAI 180
Query: 1020 XXXXXXXXXESFVAAAEILKERGAYKIYVMATHGILSAEAPRLIEESSIDEVVVTNTVPH 1199
+SF+AAAE LKERGAYKI+VMATHG+LS++APRLIEES+IDEVVVTNT+PH
Sbjct: 181 IVDDIIDDVDSFLAAAETLKERGAYKIFVMATHGLLSSDAPRLIEESAIDEVVVTNTIPH 240
Query: 1200 EVQKLQCPKIKTVDISLILSEAIRRIHNGESMAYLFRNITVDD 1328
E+QKLQCPKIKTVDIS+ILSEAIRRIHNGESM+YLFRNI +DD
Sbjct: 241 EIQKLQCPKIKTVDISMILSEAIRRIHNGESMSYLFRNIGLDD 283
>ref|NP_080938.1| ribose-phosphate pyrophosphokinase 2 [Mus musculus].
Length = 318
Score = 235 bits (599), Expect = 1e-61
Identities = 144/334 (43%), Positives = 196/334 (58%), Gaps = 2/334 (0%)
Frame = +3
Query: 321 ELAKRITERLGAELGKSVVYQETNGETRVEIKESVRGQDIFIIQTIPRDVNTAVMELLIM 500
+L++R+ +RLG ELGK V + +N ET VEI ESVRG+D++IIQ+ ++N +MELLIM
Sbjct: 14 DLSQRVADRLGLELGKVVTKKFSNQETSVEIGESVRGEDVYIIQSGCGEINDNLMELLIM 73
Query: 501 AYALKTACARNIIGVIPYFPYSKQSKMRK-RGSIVCKLLASMLAKAGLTHIITMDLHQKE 677
A K A + + VIP FPY++Q K K R I KL+A+ML+ AG HIITMDLH +
Sbjct: 74 INACKIASSSRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAGADHIITMDLHASQ 133
Query: 678 IQGFFSFPVDNLRASPFLLQYIQEEIPNYRNAVIVAKSPDAAKRAQSYAERLRLGLAVIH 857
IQGFF PVDNL A P +LQ+I+E I +RN +IV+ AKR S A+RL + A+IH
Sbjct: 134 IQGFFDIPVDNLYAEPAVLQWIRENITEWRNCIIVSPDAGGAKRVTSIADRLNVEFALIH 193
Query: 858 GEAQCA-ELDMDDGRHSPPMVKNATVHPGLELPLMMAKEKPPITXXXXXXXXXXXXXXXX 1034
E + A E+D MV V K++ I
Sbjct: 194 KERKKANEVDR--------MVLVGDV-----------KDRVAILVDDMADTCG------- 227
Query: 1035 XXXXESFVAAAEILKERGAYKIYVMATHGILSAEAPRLIEESSIDEVVVTNTVPHEVQKL 1214
+ AA+ L GA K+Y + THGI S A I ++ + VVVTNT+P E +
Sbjct: 228 -----TICHAADKLLSAGATKVYAILTHGIFSGPAISRINSAAFEAVVVTNTIPQEDKMK 282
Query: 1215 QCPKIKTVDISLILSEAIRRIHNGESMAYLFRNI 1316
C KI+ +DIS+IL+EAIRR HNGES++YLF ++
Sbjct: 283 HCSKIQVIDISMILAEAIRRTHNGESVSYLFSHV 316
>ref|NP_001032835.2| hypothetical protein LOC328099 [Mus musculus].
Length = 318
Score = 231 bits (589), Expect = 1e-60
Identities = 145/346 (41%), Positives = 200/346 (57%), Gaps = 2/346 (0%)
Frame = +3
Query: 285 RVFSANSTAACTELAKRITERLGAELGKSVVYQETNGETRVEIKESVRGQDIFIIQTIPR 464
++FS +S +L+++I +RLG ELGK V + +N ET VEI ESVRG+D++I+Q+
Sbjct: 5 KIFSGSSHQ---DLSQKIADRLGLELGKVVTKKFSNQETCVEIGESVRGEDVYIVQSGCG 61
Query: 465 DVNTAVMELLIMAYALKTACARNIIGVIPYFPYSKQSKMRK-RGSIVCKLLASMLAKAGL 641
++N +MELLIM A K A A + VIP FPY++Q K K R I KL+A+ML+ AG
Sbjct: 62 EINDNLMELLIMINACKIASASRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAGA 121
Query: 642 THIITMDLHQKEIQGFFSFPVDNLRASPFLLQYIQEEIPNYRNAVIVAKSPDAAKRAQSY 821
HIITMDLH +IQGFF PVDNL A P +L++I+E I +RN IV+ AKR S
Sbjct: 122 DHIITMDLHASQIQGFFDIPVDNLYAEPAVLKWIRENISEWRNCTIVSPDAGGAKRVTSI 181
Query: 822 AERLRLGLAVIHGEAQCA-ELDMDDGRHSPPMVKNATVHPGLELPLMMAKEKPPITXXXX 998
A+RL + A+IH E + A E+D MV V K++ I
Sbjct: 182 ADRLNVDFALIHKERKKANEVDR--------MVLVGDV-----------KDRVAILVDDM 222
Query: 999 XXXXXXXXXXXXXXXXESFVAAAEILKERGAYKIYVMATHGILSAEAPRLIEESSIDEVV 1178
+ AA+ L GA ++Y + THGI S A I + + VV
Sbjct: 223 ADTCG------------TICHAADKLLSAGATRVYAILTHGIFSGPAISRINNACFEAVV 270
Query: 1179 VTNTVPHEVQKLQCPKIKTVDISLILSEAIRRIHNGESMAYLFRNI 1316
VTNT+P E + C KI+ +DIS+IL+EAIRR HNGES++YLF ++
Sbjct: 271 VTNTIPQEDKMKHCSKIQVIDISMILAEAIRRTHNGESVSYLFSHV 316
>ref|NP_067438.1| ribose-phosphate pyrophosphokinase 1 [Mus musculus].
Length = 318
Score = 231 bits (589), Expect = 1e-60
Identities = 145/346 (41%), Positives = 200/346 (57%), Gaps = 2/346 (0%)
Frame = +3
Query: 285 RVFSANSTAACTELAKRITERLGAELGKSVVYQETNGETRVEIKESVRGQDIFIIQTIPR 464
++FS +S +L+++I +RLG ELGK V + +N ET VEI ESVRG+D++I+Q+
Sbjct: 5 KIFSGSSHQ---DLSQKIADRLGLELGKVVTKKFSNQETCVEIGESVRGEDVYIVQSGCG 61
Query: 465 DVNTAVMELLIMAYALKTACARNIIGVIPYFPYSKQSKMRK-RGSIVCKLLASMLAKAGL 641
++N +MELLIM A K A A + VIP FPY++Q K K R I KL+A+ML+ AG
Sbjct: 62 EINDNLMELLIMINACKIASASRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAGA 121
Query: 642 THIITMDLHQKEIQGFFSFPVDNLRASPFLLQYIQEEIPNYRNAVIVAKSPDAAKRAQSY 821
HIITMDLH +IQGFF PVDNL A P +L++I+E I +RN IV+ AKR S
Sbjct: 122 DHIITMDLHASQIQGFFDIPVDNLYAEPAVLKWIRENISEWRNCTIVSPDAGGAKRVTSI 181
Query: 822 AERLRLGLAVIHGEAQCA-ELDMDDGRHSPPMVKNATVHPGLELPLMMAKEKPPITXXXX 998
A+RL + A+IH E + A E+D MV V K++ I
Sbjct: 182 ADRLNVDFALIHKERKKANEVDR--------MVLVGDV-----------KDRVAILVDDM 222
Query: 999 XXXXXXXXXXXXXXXXESFVAAAEILKERGAYKIYVMATHGILSAEAPRLIEESSIDEVV 1178
+ AA+ L GA ++Y + THGI S A I + + VV
Sbjct: 223 ADTCG------------TICHAADKLLSAGATRVYAILTHGIFSGPAISRINNACFEAVV 270
Query: 1179 VTNTVPHEVQKLQCPKIKTVDISLILSEAIRRIHNGESMAYLFRNI 1316
VTNT+P E + C KI+ +DIS+IL+EAIRR HNGES++YLF ++
Sbjct: 271 VTNTIPQEDKMKHCSKIQVIDISMILAEAIRRTHNGESVSYLFSHV 316
>ref|NP_083570.1| phosphoribosyl pyrophosphate synthetase 1-like 1 [Mus musculus].
Length = 318
Score = 231 bits (588), Expect = 2e-60
Identities = 145/346 (41%), Positives = 202/346 (58%), Gaps = 2/346 (0%)
Frame = +3
Query: 285 RVFSANSTAACTELAKRITERLGAELGKSVVYQETNGETRVEIKESVRGQDIFIIQTIPR 464
++FS +S +L+++ITERLG EL K V + +N ET VEI ESVRG+D++I+Q+
Sbjct: 5 KLFSGSSHQ---DLSQKITERLGLELSKVVTKKFSNQETCVEIGESVRGEDVYIVQSGCG 61
Query: 465 DVNTAVMELLIMAYALKTACARNIIGVIPYFPYSKQSKMRK-RGSIVCKLLASMLAKAGL 641
++N ++MELLIM A K A A + VIP FPY++Q K K R I KL+A+ML+ AG
Sbjct: 62 EINDSLMELLIMINACKIASASRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSIAGA 121
Query: 642 THIITMDLHQKEIQGFFSFPVDNLRASPFLLQYIQEEIPNYRNAVIVAKSPDAAKRAQSY 821
HIITMDLH +IQGFF PVDNL A P +L++I+E I ++RN IV+ AKR S
Sbjct: 122 DHIITMDLHASQIQGFFDIPVDNLYAEPAVLKWIKENISDWRNCTIVSPDAGGAKRVTSI 181
Query: 822 AERLRLGLAVIHGEAQCA-ELDMDDGRHSPPMVKNATVHPGLELPLMMAKEKPPITXXXX 998
A+ L + A+IH E + A E+D MV V K++ I
Sbjct: 182 ADHLNVDFALIHKERKKANEVDR--------MVLVGDV-----------KDRVAILVDDM 222
Query: 999 XXXXXXXXXXXXXXXXESFVAAAEILKERGAYKIYVMATHGILSAEAPRLIEESSIDEVV 1178
+ AA+ L GA ++Y + THGI S A I + + VV
Sbjct: 223 ADTCG------------TICYAADKLLSEGATRVYAILTHGIFSGPAIARINGACFEAVV 270
Query: 1179 VTNTVPHEVQKLQCPKIKTVDISLILSEAIRRIHNGESMAYLFRNI 1316
VTNT+P E + QC KI+ +DI++IL+EAIRR HNGES++YLF ++
Sbjct: 271 VTNTIPQEDKMKQCSKIQVIDIAMILAEAIRRTHNGESVSYLFSHV 316
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 57,456,759
Number of extensions: 1626058
Number of successful extensions: 7988
Number of sequences better than 1.0e-05: 9
Number of HSP's gapped: 7935
Number of HSP's successfully gapped: 13
Length of query: 608
Length of database: 15,617,559
Length adjustment: 107
Effective length of query: 501
Effective length of database: 12,403,707
Effective search space: 6214257207
Effective search space used: 6214257207
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002404
(1825 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_003131222.1| PREDICTED: phosphoribosyl pyrophosphate synt... 647 0.0
Alignment gi|NP_001230730.1| phosphoribosyl pyrophosphate synthetase 2 [S... 234 2e-61
Alignment gi|XP_003135349.1| PREDICTED: ribose-phosphate pyrophosphokinas... 231 1e-60
Alignment gi|XP_003130238.1| PREDICTED: ribose-phosphate pyrophosphokinas... 228 7e-60
Alignment gi|XP_003361489.1| PREDICTED: phosphoribosyl pyrophosphate synt... 176 4e-44
Alignment gi|XP_003358354.1| PREDICTED: phosphoribosyl pyrophosphate synt... 176 4e-44
Alignment gi|XP_003132086.2| PREDICTED: phosphoribosyl pyrophosphate synt... 176 4e-44
Alignment gi|XP_003132090.2| PREDICTED: hypothetical protein LOC100511960... 151 1e-36
>ref|XP_003131222.1| PREDICTED: phosphoribosyl pyrophosphate synthase-associated protein 1
[Sus scrofa].
Length = 385
Score = 647 bits (1669), Expect = 0.0
Identities = 336/356 (94%), Positives = 336/356 (94%)
Frame = +3
Query: 261 MNAARTGYRVFSANSTAACTELAKRITERLGAELGKSVVYQETNGETRVEIKESVRGQDI 440
MNAARTGYRVFSANSTAACTELAKRITERLGAELGKSVVYQETNGETRVEIKESVRGQDI
Sbjct: 30 MNAARTGYRVFSANSTAACTELAKRITERLGAELGKSVVYQETNGETRVEIKESVRGQDI 89
Query: 441 FIIQTIPRDVNTAVMELLIMAYALKTACARNIIGVIPYFPYSKQSKMRKRGSIVCKLLAS 620
FIIQTIPRDVNTAVMELLIMAYALKTACARNIIGVIPYFPYSKQSKMRKRGSIVCKLLAS
Sbjct: 90 FIIQTIPRDVNTAVMELLIMAYALKTACARNIIGVIPYFPYSKQSKMRKRGSIVCKLLAS 149
Query: 621 MLAKAGLTHIITMDLHQKEIQGFFSFPVDNLRASPFLLQYIQEEIPNYRNAVIVAKSPDA 800
MLAKAGLTHIITMDLHQKEIQGFFSFPVDNLRASPFLLQYIQEEIPNYRNAVIVAKSPDA
Sbjct: 150 MLAKAGLTHIITMDLHQKEIQGFFSFPVDNLRASPFLLQYIQEEIPNYRNAVIVAKSPDA 209
Query: 801 AKRAQSYAERLRLGLAVIHGEAQCAELDMDDGRHSPPMVKNATVHPGLELPLMMAKEKPP 980
AKRAQSYAERLRLGLAVIHGEAQCAELDMDDGRHSPPMVKNATVHPGLELPLMMAKEKPP
Sbjct: 210 AKRAQSYAERLRLGLAVIHGEAQCAELDMDDGRHSPPMVKNATVHPGLELPLMMAKEKPP 269
Query: 981 ITXXXXXXXXXXXXXXXXXXXXESFVAAAEILKERGAYKIYVMATHGILSAEAPRLIEES 1160
IT ESFVAAAEILKERGAYKIYVMATHGILSAEAPRLIEES
Sbjct: 270 ITVVGDVGGRIAIIVDDIIDDVESFVAAAEILKERGAYKIYVMATHGILSAEAPRLIEES 329
Query: 1161 SIDEVVVTNTVPHEVQKLQCPKIKTVDISLILSEAIRRIHNGESMAYLFRNITVDD 1328
SIDEVVVTNTVPHEVQKLQCPKIKTVDISLILSEAIRRIHNGESMAYLFRNITVDD
Sbjct: 330 SIDEVVVTNTVPHEVQKLQCPKIKTVDISLILSEAIRRIHNGESMAYLFRNITVDD 385
>ref|NP_001230730.1| phosphoribosyl pyrophosphate synthetase 2 [Sus scrofa].
Length = 318
Score = 234 bits (596), Expect = 2e-61
Identities = 143/334 (42%), Positives = 196/334 (58%), Gaps = 2/334 (0%)
Frame = +3
Query: 321 ELAKRITERLGAELGKSVVYQETNGETRVEIKESVRGQDIFIIQTIPRDVNTAVMELLIM 500
+L++R+ +RLG ELGK V + +N ET VEI ESVRG+D++IIQ+ ++N +MELLIM
Sbjct: 14 DLSQRVADRLGLELGKVVTKKFSNQETSVEIGESVRGEDVYIIQSGCGEINDNLMELLIM 73
Query: 501 AYALKTACARNIIGVIPYFPYSKQSKMRK-RGSIVCKLLASMLAKAGLTHIITMDLHQKE 677
A K A + + VIP FPY++Q K K R I KL+A+ML+ AG HIITMDLH +
Sbjct: 74 INACKIASSSRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAGADHIITMDLHASQ 133
Query: 678 IQGFFSFPVDNLRASPFLLQYIQEEIPNYRNAVIVAKSPDAAKRAQSYAERLRLGLAVIH 857
IQGFF P+DNL A P +LQ+I+E I +RN +IV+ AKR S A+RL + A+IH
Sbjct: 134 IQGFFDIPMDNLYAEPAVLQWIRENIAEWRNCIIVSPDAGGAKRVTSIADRLNVEFALIH 193
Query: 858 GEAQCA-ELDMDDGRHSPPMVKNATVHPGLELPLMMAKEKPPITXXXXXXXXXXXXXXXX 1034
E + A E+D MV V K++ I
Sbjct: 194 KERKKANEVDR--------MVLVGDV-----------KDRVAILVDDMADTCG------- 227
Query: 1035 XXXXESFVAAAEILKERGAYKIYVMATHGILSAEAPRLIEESSIDEVVVTNTVPHEVQKL 1214
+ AA+ L GA K+Y + THGI S A I ++ + VVVTNT+P E +
Sbjct: 228 -----TICHAADKLLSAGATKVYAILTHGIFSGPAISRINNAAFEAVVVTNTIPQEDKMK 282
Query: 1215 QCPKIKTVDISLILSEAIRRIHNGESMAYLFRNI 1316
C KI+ +DIS+IL+EAIRR HNGES++YLF ++
Sbjct: 283 HCSKIQVIDISMILAEAIRRTHNGESVSYLFSHV 316
>ref|XP_003135349.1| PREDICTED: ribose-phosphate pyrophosphokinase 1-like [Sus scrofa].
Length = 318
Score = 231 bits (589), Expect = 1e-60
Identities = 145/346 (41%), Positives = 200/346 (57%), Gaps = 2/346 (0%)
Frame = +3
Query: 285 RVFSANSTAACTELAKRITERLGAELGKSVVYQETNGETRVEIKESVRGQDIFIIQTIPR 464
++FS +S +L+++I +RLG ELGK V + +N ET VEI ESVRG+D++I+Q+
Sbjct: 5 KIFSGSSHQ---DLSQKIADRLGLELGKVVTKKFSNQETCVEIGESVRGEDVYIVQSGCG 61
Query: 465 DVNTAVMELLIMAYALKTACARNIIGVIPYFPYSKQSKMRK-RGSIVCKLLASMLAKAGL 641
++N +MELLIM A K A A + VIP FPY++Q K K R I KL+A+ML+ AG
Sbjct: 62 EINDNLMELLIMINACKIASASRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAGA 121
Query: 642 THIITMDLHQKEIQGFFSFPVDNLRASPFLLQYIQEEIPNYRNAVIVAKSPDAAKRAQSY 821
HIITMDLH +IQGFF PVDNL A P +L++I+E I +RN IV+ AKR S
Sbjct: 122 DHIITMDLHASQIQGFFDIPVDNLYAEPAVLKWIRENISEWRNCTIVSPDAGGAKRVTSI 181
Query: 822 AERLRLGLAVIHGEAQCA-ELDMDDGRHSPPMVKNATVHPGLELPLMMAKEKPPITXXXX 998
A+RL + A+IH E + A E+D MV V K++ I
Sbjct: 182 ADRLNVDFALIHKERKKANEVDR--------MVLVGDV-----------KDRVAILVDDM 222
Query: 999 XXXXXXXXXXXXXXXXESFVAAAEILKERGAYKIYVMATHGILSAEAPRLIEESSIDEVV 1178
+ AA+ L GA ++Y + THGI S A I + + VV
Sbjct: 223 ADTCG------------TICHAADKLLSAGATRVYAILTHGIFSGPAISRINNACFEAVV 270
Query: 1179 VTNTVPHEVQKLQCPKIKTVDISLILSEAIRRIHNGESMAYLFRNI 1316
VTNT+P E + C KI+ +DIS+IL+EAIRR HNGES++YLF ++
Sbjct: 271 VTNTIPQEDKMKHCSKIQVIDISMILAEAIRRTHNGESVSYLFSHV 316
>ref|XP_003130238.1| PREDICTED: ribose-phosphate pyrophosphokinase 1-like [Sus scrofa].
Length = 318
Score = 228 bits (582), Expect = 7e-60
Identities = 138/345 (40%), Positives = 194/345 (56%), Gaps = 1/345 (0%)
Frame = +3
Query: 285 RVFSANSTAACTELAKRITERLGAELGKSVVYQETNGETRVEIKESVRGQDIFIIQTIPR 464
++FS +S +L+++I RLG +LGK V + +N ET VEI ESVRG+D++I+Q+
Sbjct: 5 KIFSGSSHQ---DLSQKIAGRLGLKLGKVVTKKFSNQETCVEIGESVRGEDVYIMQSGCG 61
Query: 465 DVNTAVMELLIMAYALKTACARNIIGVIPYFPYSKQSKMRK-RGSIVCKLLASMLAKAGL 641
++N +MELLIM A KTA A + VIP FPY++Q K K + I KL+A+ML+ AG
Sbjct: 62 EINDNLMELLIMINACKTASASRVTAVIPCFPYARQDKKDKNQAPISAKLVANMLSVAGA 121
Query: 642 THIITMDLHQKEIQGFFSFPVDNLRASPFLLQYIQEEIPNYRNAVIVAKSPDAAKRAQSY 821
HIITMDLH +IQGFF PVDNL A P +L++I+E I +RN IV+ D AKR S
Sbjct: 122 DHIITMDLHASQIQGFFDIPVDNLYAEPAVLKWIKENISEWRNCTIVSPDADGAKRVTSI 181
Query: 822 AERLRLGLAVIHGEAQCAELDMDDGRHSPPMVKNATVHPGLELPLMMAKEKPPITXXXXX 1001
A+RL + A+IH E + A E +
Sbjct: 182 ADRLNVDFALIHKEKK------------------------------KANEVNRMVLVGDV 211
Query: 1002 XXXXXXXXXXXXXXXESFVAAAEILKERGAYKIYVMATHGILSAEAPRLIEESSIDEVVV 1181
+ AA+ L GA ++Y + +HGI S A I + + VVV
Sbjct: 212 KDRVAILVDDIADTCGTICHAADKLLSAGAIRVYAILSHGIFSGPAITHINSACFEAVVV 271
Query: 1182 TNTVPHEVQKLQCPKIKTVDISLILSEAIRRIHNGESMAYLFRNI 1316
TNT+P E + +C KI+ +DIS+IL+EAIRR HNGES++YLF ++
Sbjct: 272 TNTIPQEDKMKRCSKIQVIDISMILAEAIRRTHNGESVSYLFSHV 316
>ref|XP_003361489.1| PREDICTED: phosphoribosyl pyrophosphate synthase-associated protein
2-like [Sus scrofa].
Length = 175
Score = 176 bits (446), Expect = 4e-44
Identities = 85/126 (67%), Positives = 105/126 (83%)
Frame = +3
Query: 261 MNAARTGYRVFSANSTAACTELAKRITERLGAELGKSVVYQETNGETRVEIKESVRGQDI 440
MN + G +FSANS ++C EL+K+I ERLG E+GK VYQE + ETRV+I+ESVRG+D+
Sbjct: 13 MNVTKGGLVLFSANSNSSCMELSKKIAERLGVEMGKVQVYQEPDRETRVQIQESVRGKDV 72
Query: 441 FIIQTIPRDVNTAVMELLIMAYALKTACARNIIGVIPYFPYSKQSKMRKRGSIVCKLLAS 620
FIIQT+ +DVNT +MELLIM YA KT+CA+++ GVIPYFPYSKQ KMRKRGSIV KLLAS
Sbjct: 73 FIIQTVSKDVNTTIMELLIMVYACKTSCAKSVTGVIPYFPYSKQCKMRKRGSIVSKLLAS 132
Query: 621 MLAKAG 638
M+ KAG
Sbjct: 133 MMCKAG 138
>ref|XP_003358354.1| PREDICTED: phosphoribosyl pyrophosphate synthase-associated protein
2-like isoform 2 [Sus scrofa].
Length = 147
Score = 176 bits (446), Expect = 4e-44
Identities = 85/126 (67%), Positives = 105/126 (83%)
Frame = +3
Query: 261 MNAARTGYRVFSANSTAACTELAKRITERLGAELGKSVVYQETNGETRVEIKESVRGQDI 440
MN + G +FSANS ++C EL+K+I ERLG E+GK VYQE + ETRV+I+ESVRG+D+
Sbjct: 13 MNVTKGGLVLFSANSNSSCMELSKKIAERLGVEMGKVQVYQEPDRETRVQIQESVRGKDV 72
Query: 441 FIIQTIPRDVNTAVMELLIMAYALKTACARNIIGVIPYFPYSKQSKMRKRGSIVCKLLAS 620
FIIQT+ +DVNT +MELLIM YA KT+CA+++ GVIPYFPYSKQ KMRKRGSIV KLLAS
Sbjct: 73 FIIQTVSKDVNTTIMELLIMVYACKTSCAKSVTGVIPYFPYSKQCKMRKRGSIVSKLLAS 132
Query: 621 MLAKAG 638
M+ KAG
Sbjct: 133 MMCKAG 138
>ref|XP_003132086.2| PREDICTED: phosphoribosyl pyrophosphate synthase-associated protein
2-like isoform 1 [Sus scrofa].
Length = 147
Score = 176 bits (446), Expect = 4e-44
Identities = 85/126 (67%), Positives = 105/126 (83%)
Frame = +3
Query: 261 MNAARTGYRVFSANSTAACTELAKRITERLGAELGKSVVYQETNGETRVEIKESVRGQDI 440
MN + G +FSANS ++C EL+K+I ERLG E+GK VYQE + ETRV+I+ESVRG+D+
Sbjct: 13 MNVTKGGLVLFSANSNSSCMELSKKIAERLGVEMGKVQVYQEPDRETRVQIQESVRGKDV 72
Query: 441 FIIQTIPRDVNTAVMELLIMAYALKTACARNIIGVIPYFPYSKQSKMRKRGSIVCKLLAS 620
FIIQT+ +DVNT +MELLIM YA KT+CA+++ GVIPYFPYSKQ KMRKRGSIV KLLAS
Sbjct: 73 FIIQTVSKDVNTTIMELLIMVYACKTSCAKSVTGVIPYFPYSKQCKMRKRGSIVSKLLAS 132
Query: 621 MLAKAG 638
M+ KAG
Sbjct: 133 MMCKAG 138
>ref|XP_003132090.2| PREDICTED: hypothetical protein LOC100511960 [Sus scrofa].
Length = 459
Score = 151 bits (382), Expect = 1e-36
Identities = 78/126 (61%), Positives = 95/126 (75%), Gaps = 1/126 (0%)
Frame = +3
Query: 798 AAKRAQSYAERLRLGLAVIHGEAQCAELDMDDGRHSPPMVKNAT-VHPGLELPLMMAKEK 974
A AQS+AERLRLG+AVIHGEAQ AE D+ DGRHSPPMV++A +HP LE+P+++ KEK
Sbjct: 333 ARDAAQSFAERLRLGIAVIHGEAQDAESDLVDGRHSPPMVRSAAAIHPSLEIPMLIPKEK 392
Query: 975 PPITXXXXXXXXXXXXXXXXXXXXESFVAAAEILKERGAYKIYVMATHGILSAEAPRLIE 1154
PPIT +SF+AAAE LKERGAYKI+VMATHG+LS++APRLIE
Sbjct: 393 PPITVVGDVGGRIAIIVDDIIDDVDSFLAAAETLKERGAYKIFVMATHGLLSSDAPRLIE 452
Query: 1155 ESSIDE 1172
ES+IDE
Sbjct: 453 ESAIDE 458
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 43,361,445
Number of extensions: 1285061
Number of successful extensions: 7139
Number of sequences better than 1.0e-05: 8
Number of HSP's gapped: 7056
Number of HSP's successfully gapped: 11
Length of query: 608
Length of database: 11,343,932
Length adjustment: 105
Effective length of query: 503
Effective length of database: 8,729,747
Effective search space: 4391062741
Effective search space used: 4391062741
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002404
(1825 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr12 1211 0.0
gb|GL894474.1| Sus scrofa unplaced genomic scaffold chrU_scaffol... 147 2e-32
>Sscrofa_Chr12
|| Length = 63588571
Score = 1211 bits (611), Expect = 0.0
Identities = 654/663 (98%), Gaps = 4/663 (0%)
Strand = Plus / Plus
Query: 1166 cgacgaggtggtggtgacaaatactgtccctcacgaggtgcagaagctgcagtgtcccaa 1225
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5077453 cgaccaggtggtggtgacaaatactgtccctcacgaggtgcagaagctgcagtgtcccaa 5077512
Query: 1226 gatcaagacggtggacatcagtctgatcctgtccgaagccattcgcagaatccacaacgg 1285
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5077513 gatcaagacggtggacatcagtctgatcctgtccgaagccattcgcagaatccacaacgg 5077572
Query: 1286 cgagtccatggcctacctcttccgaaacatcaccgtggacgactagctctccccgtggcc 1345
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5077573 cgagtccatggcctacctcttccgaaacatcaccgtggacgactagctctccccgtggcc 5077632
Query: 1346 ttgaccctggagctcgaggaagccatgtgcgcggcagggccggcggctctgtgcacggtg 1405
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5077633 ttgaccctggagctcgaggaagccatgtgcgcggcagggccggcggctctgtgcacggtg 5077692
Query: 1406 ttccctttcgggggaggcgcgtggtctctcttgcgttgccaagtccagttggtgggaggc 1465
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5077693 ttccctttcgggggaggcgcgtggtctctcttgcgttgccaagtccagttggtgggaggc 5077752
Query: 1466 gttcagctcgcagagcgggggacagcgatgatgcgtgaatggccttcaccgtccccgggg 1525
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5077753 gttcagctcgcagagcgggggacagcgatgatgcgtgaatggccttcaccgtccccgggg 5077812
Query: 1526 tcatcctgttccttaaaagttagacatttccccgtagcgaatctgaacgtctcgctgctg 1585
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5077813 tcatcctgttccttaaaagttagacatttccccgtagcgaatctgaacgtctcgctgctg 5077872
Query: 1586 tggaagcgggcgcgaaaggccgacaccgtgcctccctcaggctcccttagttgcttccac 1645
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5077873 tggaagcgggcgcgaaaggccgacaccgtgcctccctcaggctcccttagttgcttccac 5077932
Query: 1646 caccgggaacccgcgtgctgctgctgaactaggctggggacgccgagcccccggcactgg 1705
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5077933 caccgggaacccgcgtgctgctgctgaactaggctggggacgccgagcccccggcactgg 5077992
Query: 1706 ttctgttcca-ctgccctctcgctggtcacct-cacgcccgtcttttgaagagactccta 1763
|||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||||
Sbjct: 5077993 ttctgttccacctgccctctcgctggtcacctccacgcccgtcttttgtagagactccta 5078052
Query: 1764 tcttttcttgatgacccgctcgcccagc-gccattgaaggacgaggcatttacggcgctt 1822
||||| ||||||||||||||| ||||| ||||||||||||||| |||||||||||||||
Sbjct: 5078053 tctttctttgatgacccgctcg-ccagcggccattgaaggacgaagcatttacggcgctt 5078111
Query: 1823 ccc 1825
|||
Sbjct: 5078112 ccc 5078114
Score = 656 bits (331), Expect = 0.0
Identities = 340/343 (99%)
Strand = Plus / Plus
Query: 2 acaagctccgggggagccagaaccccggtggcctttgggacgaggcgggtaggggtctcg 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5047870 acaagctccgggggagccagaaccccggtggcctttgggacgaggcgggtaggggtctcg 5047929
Query: 62 ggcctctccgcccctgtgccggtgcccagccgggcctcgcggccgcctcctcgcaaccgc 121
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5047930 ggcctctccgctcctgtgccggtgcccagccgggcctcgcggccgcctcctcgcaaccgc 5047989
Query: 122 tcccccgtgcagtcccgcgcgggcccgctgtaactgcgcgccgggccggacgatgcccaa 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5047990 tcccccgtgcagtcccgcgcgggcccgctgtaactgcgcgccgggccggacgatgcccaa 5048049
Query: 182 gaagctgctgctgctgcccccgctctccgtgtccaccgctttccgcgccccgcgagcctg 241
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 5048050 gaagctgctgctgctgcccccgctctccgtgtcctccgctttccgcgccccgcgagcctg 5048109
Query: 242 ccctgcctcccgcccggccatgaacgccgcccgcaccggctaccgagtcttctcggccaa 301
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 5048110 ccctgcctcccgcccggccatgaacgctgcccgcaccggctaccgagtcttctcggccaa 5048169
Query: 302 ctccacggccgcctgcaccgagctggccaagcgcatcaccgag 344
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5048170 ctccacggccgcctgcaccgagctggccaagcgcatcaccgag 5048212
Score = 353 bits (178), Expect = 2e-94
Identities = 178/178 (100%)
Strand = Plus / Plus
Query: 461 cagagacgtgaacacggccgtgatggagctgctgatcatggcctacgcgctgaagacggc 520
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5063506 cagagacgtgaacacggccgtgatggagctgctgatcatggcctacgcgctgaagacggc 5063565
Query: 521 ctgtgccaggaacatcatcggcgtcatcccctacttcccctacagcaagcagagcaagat 580
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5063566 ctgtgccaggaacatcatcggcgtcatcccctacttcccctacagcaagcagagcaagat 5063625
Query: 581 gcgcaagcggggctccatcgtgtgcaagctgctggcctccatgctggcgaaagccggt 638
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5063626 gcgcaagcggggctccatcgtgtgcaagctgctggcctccatgctggcgaaagccggt 5063683
Score = 297 bits (150), Expect = 1e-77
Identities = 150/150 (100%)
Strand = Plus / Plus
Query: 1025 ggacgacatcattgacgacgtggagagtttcgtggccgctgcggagatcctgaaagagag 1084
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5076604 ggacgacatcattgacgacgtggagagtttcgtggccgctgcggagatcctgaaagagag 5076663
Query: 1085 aggcgcgtacaagatctacgtcatggccacgcacggcatcctgtccgcggaggccccgcg 1144
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5076664 aggcgcgtacaagatctacgtcatggccacgcacggcatcctgtccgcggaggccccgcg 5076723
Query: 1145 cctgatcgaggagtcctccatcgacgaggt 1174
||||||||||||||||||||||||||||||
Sbjct: 5076724 cctgatcgaggagtcctccatcgacgaggt 5076753
Score = 293 bits (148), Expect = 2e-76
Identities = 148/148 (100%)
Strand = Plus / Plus
Query: 807 agggcccagtcgtacgcggagaggctgcgtctgggtttggccgtgatccacggggaagcg 866
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5067366 agggcccagtcgtacgcggagaggctgcgtctgggtttggccgtgatccacggggaagcg 5067425
Query: 867 cagtgcgcggagctggacatggacgacggccgccactccccgcccatggtcaagaacgcc 926
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5067426 cagtgcgcggagctggacatggacgacggccgccactccccgcccatggtcaagaacgcc 5067485
Query: 927 accgtccaccccgggctggagttgccgt 954
||||||||||||||||||||||||||||
Sbjct: 5067486 accgtccaccccgggctggagttgccgt 5067513
Score = 224 bits (113), Expect = 1e-55
Identities = 116/117 (99%)
Strand = Plus / Plus
Query: 636 ggtttaactcacattatcactatggatcttcaccaaaaggaaatccaaggctttttcagc 695
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5065866 ggtttaactcacattatcactatggatcttcaccaaaaggaaatccaaggctttttcagc 5065925
Query: 696 tttcctgtggacaaccttagagcctcgcctttcctgcttcagtacatccaggaagaa 752
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5065926 tttcccgtggacaaccttagagcctcgcctttcctgcttcagtacatccaggaagaa 5065982
Score = 147 bits (74), Expect = 2e-32
Identities = 127/142 (89%), Gaps = 2/142 (1%)
Strand = Plus / Plus
Query: 483 atggagctgctgatcatggcctacgcgctg-aagacggcctgtgccaggaacatcatcgg 541
||||||||||||||||||| ||||| ||| ||||| |||| |||| || | ||| |||
Sbjct: 62862847 atggagctgctgatcatggtgtacgc-ctgcaagacctcctgcgccaagagcgtcaccgg 62862905
Query: 542 cgtcatcccctacttcccctacagcaagcagagcaagatgcgcaagcggggctccatcgt 601
||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 62862906 cgtgatcccctacttcccctacagcaagcagtgcaagatgcgcaagcggggctccatcgt 62862965
Query: 602 gtgcaagctgctggcctccatg 623
| |||||||||||||||||||
Sbjct: 62862966 ctccaagctgctggcctccatg 62862987
Score = 143 bits (72), Expect = 4e-31
Identities = 72/72 (100%)
Strand = Plus / Plus
Query: 955 tgatgatggccaaggagaagcccccgatcaccgtggtgggagacgtcggcgggcgcatcg 1014
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5075462 tgatgatggccaaggagaagcccccgatcaccgtggtgggagacgtcggcgggcgcatcg 5075521
Query: 1015 ccatcatagtgg 1026
||||||||||||
Sbjct: 5075522 ccatcatagtgg 5075533
Score = 137 bits (69), Expect = 2e-29
Identities = 69/69 (100%)
Strand = Plus / Plus
Query: 395 agaaacaagagttgaaataaaagaatctgttcgtggccaagatattttcattatacagac 454
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5055875 agaaacaagagttgaaataaaagaatctgttcgtggccaagatattttcattatacagac 5055934
Query: 455 gatccccag 463
|||||||||
Sbjct: 5055935 gatccccag 5055943
Score = 113 bits (57), Expect = 3e-22
Identities = 57/57 (100%)
Strand = Plus / Plus
Query: 753 attccaaattacagaaatgcggtgattgtagctaagtctcctgatgctgcaaaaagg 809
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5066446 attccaaattacagaaatgcggtgattgtagctaagtctcctgatgctgcaaaaagg 5066502
Score = 97.6 bits (49), Expect = 2e-17
Identities = 49/49 (100%)
Strand = Plus / Plus
Query: 348 cttggtgctgaactgggaaagtctgtggtttatcaagagaccaatggag 396
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5051687 cttggtgctgaactgggaaagtctgtggtttatcaagagaccaatggag 5051735
Score = 83.8 bits (42), Expect = 3e-13
Identities = 93/110 (84%)
Strand = Plus / Plus
Query: 1206 cagaagctgcagtgtcccaagatcaagacggtggacatcagtctgatcctgtccgaagcc 1265
|||||||| ||||| ||||||||||| |||||||||||||| ||||||| || || |||
Sbjct: 62922973 cagaagctccagtgccccaagatcaaaacggtggacatcagcatgatcctctcggaggcc 62923032
Query: 1266 attcgcagaatccacaacggcgagtccatggcctacctcttccgaaacat 1315
|| ||| | || ||||| || ||||||||| ||||||| ||| |||||||
Sbjct: 62923033 atccgccggattcacaatggggagtccatgtcctaccttttcagaaacat 62923082
>gb|GL894474.1| Sus scrofa unplaced genomic scaffold chrU_scaffold3135
Length = 30778
Score = 147 bits (74), Expect = 2e-32
Identities = 127/142 (89%), Gaps = 2/142 (1%)
Strand = Plus / Minus
Query: 483 atggagctgctgatcatggcctacgcgctg-aagacggcctgtgccaggaacatcatcgg 541
||||||||||||||||||| ||||| ||| ||||| |||| |||| || | ||| |||
Sbjct: 7209 atggagctgctgatcatggtgtacgc-ctgcaagacctcctgcgccaagagcgtcaccgg 7151
Query: 542 cgtcatcccctacttcccctacagcaagcagagcaagatgcgcaagcggggctccatcgt 601
||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 7150 cgtgatcccctacttcccctacagcaagcagtgcaagatgcgcaagcggggctccatcgt 7091
Query: 602 gtgcaagctgctggcctccatg 623
| |||||||||||||||||||
Sbjct: 7090 ctccaagctgctggcctccatg 7069
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 38,888,480
Number of extensions: 266
Number of successful extensions: 266
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 261
Number of HSP's successfully gapped: 13
Length of query: 1825
Length of database: 2,808,509,378
Length adjustment: 22
Effective length of query: 1803
Effective length of database: 2,808,408,574
Effective search space: 5063560658922
Effective search space used: 5063560658922
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)