Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002454
(1120 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001076935.1| heterogeneous nuclear ribonucleoprotein U-li... 461 e-130
Alignment gi|XP_002688285.1| PREDICTED: heterogeneous nuclear ribonucleop... 308 4e-84
Alignment gi|XP_001787980.1| PREDICTED: heterogeneous nuclear ribonucleop... 308 4e-84
Alignment gi|NP_001070388.2| heterogeneous nuclear ribonucleoprotein U [B... 159 6e-39
Alignment gi|NP_001193174.1| heterogeneous nuclear ribonucleoprotein U-li... 121 1e-27
Alignment gi|XP_002699340.1| PREDICTED: heterogeneous nuclear ribonucleop... 121 1e-27
>ref|NP_001076935.1| heterogeneous nuclear ribonucleoprotein U-like protein 1 [Bos
taurus].
Length = 858
Score = 461 bits (1186), Expect = e-130
Identities = 235/315 (74%), Positives = 240/315 (76%)
Frame = +1
Query: 175 MDVRRLKVNELREELQRRGLDTRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRPGHN 354
MDVRRLKVNELREELQRRGLDTRG GRPGHN
Sbjct: 1 MDVRRLKVNELREELQRRGLDTRGLKAELAERLQAALEAEEPDDERELEADDEPGRPGHN 60
Query: 355 XXXXXXXXXXXXXXXAXXXXXXXXXXXXXXXXXYSGPDGHYVMDNITRQNQFYETPVIKQ 534
A YSGPDGHYVMDNIT QNQFYET VIKQ
Sbjct: 61 NEEVETEGGSELEGTAQPPPPGLQPHPEPGG--YSGPDGHYVMDNITMQNQFYETQVIKQ 118
Query: 535 ENESGYERRPLEMEQQQQAYRPEVKTEMKQEAPTSFLPPEASQLKPDRQQFQSRKRPYEE 714
ENESGYERRPLE++QQQQAYRPEVKTEMKQEAPTSFLPPEASQ KPDRQQFQSRKRPYEE
Sbjct: 119 ENESGYERRPLEIDQQQQAYRPEVKTEMKQEAPTSFLPPEASQHKPDRQQFQSRKRPYEE 178
Query: 715 NRGRGYFEHREERRGRSPQPPAXXXXXXXXXTLVAIDTYNCDLHFKVARDRSSGYPLTIE 894
NRGRGYFEHRE+RRGRSPQPPA TLVAIDTYNCDLHFKVARDRSSGYPLTIE
Sbjct: 179 NRGRGYFEHREDRRGRSPQPPAEEDEDDFDDTLVAIDTYNCDLHFKVARDRSSGYPLTIE 238
Query: 895 GFAYLWSGARASYGVKRGRVCFEMKINEEISVKHLPSTEPDPHVVRIGWSLDSCSTQLGE 1074
GFAYLWSGARASYGV+RGRVCFEMKINEEISVKHLPSTEPDPHVVRIGWSLDSCSTQLGE
Sbjct: 239 GFAYLWSGARASYGVRRGRVCFEMKINEEISVKHLPSTEPDPHVVRIGWSLDSCSTQLGE 298
Query: 1075 KPFSYGYGGTGKNST 1119
+PFSYGYGGTGK ST
Sbjct: 299 EPFSYGYGGTGKKST 313
>ref|XP_002688285.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like 1-like [Bos
taurus].
Length = 232
Score = 308 bits (790), Expect = 4e-84
Identities = 157/207 (75%), Positives = 166/207 (80%)
Frame = +1
Query: 499 QNQFYETPVIKQENESGYERRPLEMEQQQQAYRPEVKTEMKQEAPTSFLPPEASQLKPDR 678
QNQFYET VIKQE ESGY+R+ LEM+QQQQAY PEVKTEMKQEAPTSFLPPEASQ KPDR
Sbjct: 2 QNQFYETQVIKQEKESGYKRKLLEMDQQQQAYCPEVKTEMKQEAPTSFLPPEASQHKPDR 61
Query: 679 QQFQSRKRPYEENRGRGYFEHREERRGRSPQPPAXXXXXXXXXTLVAIDTYNCDLHFKVA 858
QQFQS KR YEEN+GRGYFEHRE+RRGRS QP A TLVAIDTYNCDLHFKVA
Sbjct: 62 QQFQSCKRLYEENQGRGYFEHREDRRGRSLQPLAEEDKDDFDDTLVAIDTYNCDLHFKVA 121
Query: 859 RDRSSGYPLTIEGFAYLWSGARASYGVKRGRVCFEMKINEEISVKHLPSTEPDPHVVRIG 1038
RD SSGY L IEGFA+LWSGARASY V+RGRVC PDPHVVRIG
Sbjct: 122 RDGSSGYRLMIEGFAHLWSGARASYRVRRGRVC------------------PDPHVVRIG 163
Query: 1039 WSLDSCSTQLGEKPFSYGYGGTGKNST 1119
WSLDSCSTQLGE+PFSYGYGG+GK ST
Sbjct: 164 WSLDSCSTQLGEEPFSYGYGGSGKKST 190
>ref|XP_001787980.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like 1-like [Bos
taurus].
Length = 232
Score = 308 bits (790), Expect = 4e-84
Identities = 157/207 (75%), Positives = 166/207 (80%)
Frame = +1
Query: 499 QNQFYETPVIKQENESGYERRPLEMEQQQQAYRPEVKTEMKQEAPTSFLPPEASQLKPDR 678
QNQFYET VIKQE ESGY+R+ LEM+QQQQAY PEVKTEMKQEAPTSFLPPEASQ KPDR
Sbjct: 2 QNQFYETQVIKQEKESGYKRKLLEMDQQQQAYCPEVKTEMKQEAPTSFLPPEASQHKPDR 61
Query: 679 QQFQSRKRPYEENRGRGYFEHREERRGRSPQPPAXXXXXXXXXTLVAIDTYNCDLHFKVA 858
QQFQS KR YEEN+GRGYFEHRE+RRGRS QP A TLVAIDTYNCDLHFKVA
Sbjct: 62 QQFQSCKRLYEENQGRGYFEHREDRRGRSLQPLAEEDKDDFDDTLVAIDTYNCDLHFKVA 121
Query: 859 RDRSSGYPLTIEGFAYLWSGARASYGVKRGRVCFEMKINEEISVKHLPSTEPDPHVVRIG 1038
RD SSGY L IEGFA+LWSGARASY V+RGRVC PDPHVVRIG
Sbjct: 122 RDGSSGYRLMIEGFAHLWSGARASYRVRRGRVC------------------PDPHVVRIG 163
Query: 1039 WSLDSCSTQLGEKPFSYGYGGTGKNST 1119
WSLDSCSTQLGE+PFSYGYGG+GK ST
Sbjct: 164 WSLDSCSTQLGEEPFSYGYGGSGKKST 190
>ref|NP_001070388.2| heterogeneous nuclear ribonucleoprotein U [Bos taurus].
Length = 825
Score = 159 bits (401), Expect = 6e-39
Identities = 78/140 (55%), Positives = 98/140 (70%), Gaps = 3/140 (2%)
Frame = +1
Query: 697 KRPYEENRGRGYFEHREER---RGRSPQPPAXXXXXXXXXTLVAIDTYNCDLHFKVARDR 867
KRP E++ GRGYFE+ EE R +SPQPP T+V +DTYNCDLHFK++RDR
Sbjct: 247 KRPREDH-GRGYFEYIEENKYSRAKSPQPPVEEEDEHFDDTVVCLDTYNCDLHFKISRDR 305
Query: 868 SSGYPLTIEGFAYLWSGARASYGVKRGRVCFEMKINEEISVKHLPSTEPDPHVVRIGWSL 1047
S LT+E FA+LW+G RASYGV +G+VCFEMK+ E+I V+HL + + D H VRIGWSL
Sbjct: 306 LSASSLTMESFAFLWAGGRASYGVSKGKVCFEMKVTEKIPVRHLYTKDIDIHEVRIGWSL 365
Query: 1048 DSCSTQLGEKPFSYGYGGTG 1107
+ LGE+ FSYGY G
Sbjct: 366 TTSGMLLGEEEFSYGYSLKG 385
>ref|NP_001193174.1| heterogeneous nuclear ribonucleoprotein U-like protein 2 [Bos
taurus].
Length = 749
Score = 121 bits (303), Expect = 1e-27
Identities = 65/142 (45%), Positives = 87/142 (61%), Gaps = 4/142 (2%)
Frame = +1
Query: 694 RKRPYEENRGRGYFEHREER---RGRSPQPPAXXXXXXXXX-TLVAIDTYNCDLHFKVAR 861
R+R ++ GR Y+E REE R +SP PP TLV +DTY DLHF+V++
Sbjct: 203 RQRDEKDEHGRAYYEFREEAYHSRSKSPPPPEEEVKDEEEDHTLVNLDTYTSDLHFQVSK 262
Query: 862 DRSSGYPLTIEGFAYLWSGARASYGVKRGRVCFEMKINEEISVKHLPSTEPDPHVVRIGW 1041
DR G PL E F LWSGAR++YGV +G+VCFE K+ + + +K TE ++R+GW
Sbjct: 263 DRYGGQPLFSEKFPTLWSGARSTYGVTKGKVCFEAKVTQNLPMKE-GCTEVS--LLRVGW 319
Query: 1042 SLDSCSTQLGEKPFSYGYGGTG 1107
S+D QLGE FSYG+ G G
Sbjct: 320 SVDFSHPQLGEDEFSYGFDGRG 341
>ref|XP_002699340.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like [Bos
taurus].
Length = 749
Score = 121 bits (303), Expect = 1e-27
Identities = 65/142 (45%), Positives = 87/142 (61%), Gaps = 4/142 (2%)
Frame = +1
Query: 694 RKRPYEENRGRGYFEHREER---RGRSPQPPAXXXXXXXXX-TLVAIDTYNCDLHFKVAR 861
R+R ++ GR Y+E REE R +SP PP TLV +DTY DLHF+V++
Sbjct: 203 RQRDEKDEHGRAYYEFREEAYHSRSKSPPPPEEEVKDEEEDHTLVNLDTYTSDLHFQVSK 262
Query: 862 DRSSGYPLTIEGFAYLWSGARASYGVKRGRVCFEMKINEEISVKHLPSTEPDPHVVRIGW 1041
DR G PL E F LWSGAR++YGV +G+VCFE K+ + + +K TE ++R+GW
Sbjct: 263 DRYGGQPLFSEKFPTLWSGARSTYGVTKGKVCFEAKVTQNLPMKE-GCTEVS--LLRVGW 319
Query: 1042 SLDSCSTQLGEKPFSYGYGGTG 1107
S+D QLGE FSYG+ G G
Sbjct: 320 SVDFSHPQLGEDEFSYGFDGRG 341
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.315 0.135 0.419
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 35,800,751
Number of extensions: 926469
Number of successful extensions: 3594
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 3572
Number of HSP's successfully gapped: 7
Length of query: 373
Length of database: 17,681,374
Length adjustment: 104
Effective length of query: 269
Effective length of database: 14,240,222
Effective search space: 3830619718
Effective search space used: 3830619718
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 35 (18.1 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002454
(1120 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_866619.1| PREDICTED: similar to E1B-55kDa-associated prot... 461 e-130
Alignment gi|XP_866605.1| PREDICTED: similar to E1B-55kDa-associated prot... 461 e-130
Alignment gi|XP_866594.1| PREDICTED: similar to E1B-55kDa-associated prot... 461 e-130
Alignment gi|XP_866555.1| PREDICTED: similar to E1B-55kDa-associated prot... 461 e-130
Alignment gi|XP_866527.1| PREDICTED: similar to E1B-55kDa-associated prot... 461 e-130
Alignment gi|XP_866499.1| PREDICTED: similar to E1B-55kDa-associated prot... 461 e-130
Alignment gi|XP_852865.1| PREDICTED: similar to E1B-55kDa-associated prot... 461 e-130
Alignment gi|XP_866542.1| PREDICTED: similar to E1B-55kDa-associated prot... 454 e-128
Alignment gi|XP_866586.1| PREDICTED: similar to E1B-55kDa-associated prot... 405 e-113
Alignment gi|XP_533659.2| PREDICTED: similar to E1B-55kDa-associated prot... 405 e-113
>ref|XP_866619.1| PREDICTED: similar to E1B-55kDa-associated protein 5 isoform b
isoform 14 [Canis familiaris].
Length = 858
Score = 461 bits (1185), Expect = e-130
Identities = 237/315 (75%), Positives = 241/315 (76%)
Frame = +1
Query: 175 MDVRRLKVNELREELQRRGLDTRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRPGHN 354
MDVRRLKVNELREELQRRGLDTRG GRPGHN
Sbjct: 1 MDVRRLKVNELREELQRRGLDTRGLKAELAERLQAALEAEEPDDERELEADDEPGRPGHN 60
Query: 355 XXXXXXXXXXXXXXXAXXXXXXXXXXXXXXXXXYSGPDGHYVMDNITRQNQFYETPVIKQ 534
A YSGPDGHYVMDNITRQNQFYE+ VIKQ
Sbjct: 61 NEEVETEGGSELEGTAQPPPSGLQPHPEPGG--YSGPDGHYVMDNITRQNQFYESQVIKQ 118
Query: 535 ENESGYERRPLEMEQQQQAYRPEVKTEMKQEAPTSFLPPEASQLKPDRQQFQSRKRPYEE 714
ENESGYERRPLEMEQQQ AYRPEVKTEMKQEAPTSFLPPEASQLKPDRQQFQSRKRPYEE
Sbjct: 119 ENESGYERRPLEMEQQQ-AYRPEVKTEMKQEAPTSFLPPEASQLKPDRQQFQSRKRPYEE 177
Query: 715 NRGRGYFEHREERRGRSPQPPAXXXXXXXXXTLVAIDTYNCDLHFKVARDRSSGYPLTIE 894
NRGRGYFEHRE+RRGRSPQPPA TLVAIDTYNCDLHFKVARDRSSGYPLTIE
Sbjct: 178 NRGRGYFEHREDRRGRSPQPPAEEDEDDFDDTLVAIDTYNCDLHFKVARDRSSGYPLTIE 237
Query: 895 GFAYLWSGARASYGVKRGRVCFEMKINEEISVKHLPSTEPDPHVVRIGWSLDSCSTQLGE 1074
GFAYLWSGARASYGV+RGRVCFEMKINEEISVKHLPSTEPDPHVVRIGWSLDSCSTQLGE
Sbjct: 238 GFAYLWSGARASYGVRRGRVCFEMKINEEISVKHLPSTEPDPHVVRIGWSLDSCSTQLGE 297
Query: 1075 KPFSYGYGGTGKNST 1119
+PFSYGYGGTGK ST
Sbjct: 298 EPFSYGYGGTGKKST 312
>ref|XP_866605.1| PREDICTED: similar to E1B-55kDa-associated protein 5 isoform b
isoform 13 [Canis familiaris].
Length = 804
Score = 461 bits (1185), Expect = e-130
Identities = 237/315 (75%), Positives = 241/315 (76%)
Frame = +1
Query: 175 MDVRRLKVNELREELQRRGLDTRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRPGHN 354
MDVRRLKVNELREELQRRGLDTRG GRPGHN
Sbjct: 1 MDVRRLKVNELREELQRRGLDTRGLKAELAERLQAALEAEEPDDERELEADDEPGRPGHN 60
Query: 355 XXXXXXXXXXXXXXXAXXXXXXXXXXXXXXXXXYSGPDGHYVMDNITRQNQFYETPVIKQ 534
A YSGPDGHYVMDNITRQNQFYE+ VIKQ
Sbjct: 61 NEEVETEGGSELEGTAQPPPSGLQPHPEPGG--YSGPDGHYVMDNITRQNQFYESQVIKQ 118
Query: 535 ENESGYERRPLEMEQQQQAYRPEVKTEMKQEAPTSFLPPEASQLKPDRQQFQSRKRPYEE 714
ENESGYERRPLEMEQQQ AYRPEVKTEMKQEAPTSFLPPEASQLKPDRQQFQSRKRPYEE
Sbjct: 119 ENESGYERRPLEMEQQQ-AYRPEVKTEMKQEAPTSFLPPEASQLKPDRQQFQSRKRPYEE 177
Query: 715 NRGRGYFEHREERRGRSPQPPAXXXXXXXXXTLVAIDTYNCDLHFKVARDRSSGYPLTIE 894
NRGRGYFEHRE+RRGRSPQPPA TLVAIDTYNCDLHFKVARDRSSGYPLTIE
Sbjct: 178 NRGRGYFEHREDRRGRSPQPPAEEDEDDFDDTLVAIDTYNCDLHFKVARDRSSGYPLTIE 237
Query: 895 GFAYLWSGARASYGVKRGRVCFEMKINEEISVKHLPSTEPDPHVVRIGWSLDSCSTQLGE 1074
GFAYLWSGARASYGV+RGRVCFEMKINEEISVKHLPSTEPDPHVVRIGWSLDSCSTQLGE
Sbjct: 238 GFAYLWSGARASYGVRRGRVCFEMKINEEISVKHLPSTEPDPHVVRIGWSLDSCSTQLGE 297
Query: 1075 KPFSYGYGGTGKNST 1119
+PFSYGYGGTGK ST
Sbjct: 298 EPFSYGYGGTGKKST 312
>ref|XP_866594.1| PREDICTED: similar to E1B-55kDa-associated protein 5 isoform b
isoform 12 [Canis familiaris].
Length = 856
Score = 461 bits (1185), Expect = e-130
Identities = 237/315 (75%), Positives = 241/315 (76%)
Frame = +1
Query: 175 MDVRRLKVNELREELQRRGLDTRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRPGHN 354
MDVRRLKVNELREELQRRGLDTRG GRPGHN
Sbjct: 1 MDVRRLKVNELREELQRRGLDTRGLKAELAERLQAALEAEEPDDERELEADDEPGRPGHN 60
Query: 355 XXXXXXXXXXXXXXXAXXXXXXXXXXXXXXXXXYSGPDGHYVMDNITRQNQFYETPVIKQ 534
A YSGPDGHYVMDNITRQNQFYE+ VIKQ
Sbjct: 61 NEEVETEGGSELEGTAQPPPSGLQPHPEPGG--YSGPDGHYVMDNITRQNQFYESQVIKQ 118
Query: 535 ENESGYERRPLEMEQQQQAYRPEVKTEMKQEAPTSFLPPEASQLKPDRQQFQSRKRPYEE 714
ENESGYERRPLEMEQQQ AYRPEVKTEMKQEAPTSFLPPEASQLKPDRQQFQSRKRPYEE
Sbjct: 119 ENESGYERRPLEMEQQQ-AYRPEVKTEMKQEAPTSFLPPEASQLKPDRQQFQSRKRPYEE 177
Query: 715 NRGRGYFEHREERRGRSPQPPAXXXXXXXXXTLVAIDTYNCDLHFKVARDRSSGYPLTIE 894
NRGRGYFEHRE+RRGRSPQPPA TLVAIDTYNCDLHFKVARDRSSGYPLTIE
Sbjct: 178 NRGRGYFEHREDRRGRSPQPPAEEDEDDFDDTLVAIDTYNCDLHFKVARDRSSGYPLTIE 237
Query: 895 GFAYLWSGARASYGVKRGRVCFEMKINEEISVKHLPSTEPDPHVVRIGWSLDSCSTQLGE 1074
GFAYLWSGARASYGV+RGRVCFEMKINEEISVKHLPSTEPDPHVVRIGWSLDSCSTQLGE
Sbjct: 238 GFAYLWSGARASYGVRRGRVCFEMKINEEISVKHLPSTEPDPHVVRIGWSLDSCSTQLGE 297
Query: 1075 KPFSYGYGGTGKNST 1119
+PFSYGYGGTGK ST
Sbjct: 298 EPFSYGYGGTGKKST 312
>ref|XP_866555.1| PREDICTED: similar to E1B-55kDa-associated protein 5 isoform b
isoform 10 [Canis familiaris].
Length = 822
Score = 461 bits (1185), Expect = e-130
Identities = 237/315 (75%), Positives = 241/315 (76%)
Frame = +1
Query: 175 MDVRRLKVNELREELQRRGLDTRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRPGHN 354
MDVRRLKVNELREELQRRGLDTRG GRPGHN
Sbjct: 1 MDVRRLKVNELREELQRRGLDTRGLKAELAERLQAALEAEEPDDERELEADDEPGRPGHN 60
Query: 355 XXXXXXXXXXXXXXXAXXXXXXXXXXXXXXXXXYSGPDGHYVMDNITRQNQFYETPVIKQ 534
A YSGPDGHYVMDNITRQNQFYE+ VIKQ
Sbjct: 61 NEEVETEGGSELEGTAQPPPSGLQPHPEPGG--YSGPDGHYVMDNITRQNQFYESQVIKQ 118
Query: 535 ENESGYERRPLEMEQQQQAYRPEVKTEMKQEAPTSFLPPEASQLKPDRQQFQSRKRPYEE 714
ENESGYERRPLEMEQQQ AYRPEVKTEMKQEAPTSFLPPEASQLKPDRQQFQSRKRPYEE
Sbjct: 119 ENESGYERRPLEMEQQQ-AYRPEVKTEMKQEAPTSFLPPEASQLKPDRQQFQSRKRPYEE 177
Query: 715 NRGRGYFEHREERRGRSPQPPAXXXXXXXXXTLVAIDTYNCDLHFKVARDRSSGYPLTIE 894
NRGRGYFEHRE+RRGRSPQPPA TLVAIDTYNCDLHFKVARDRSSGYPLTIE
Sbjct: 178 NRGRGYFEHREDRRGRSPQPPAEEDEDDFDDTLVAIDTYNCDLHFKVARDRSSGYPLTIE 237
Query: 895 GFAYLWSGARASYGVKRGRVCFEMKINEEISVKHLPSTEPDPHVVRIGWSLDSCSTQLGE 1074
GFAYLWSGARASYGV+RGRVCFEMKINEEISVKHLPSTEPDPHVVRIGWSLDSCSTQLGE
Sbjct: 238 GFAYLWSGARASYGVRRGRVCFEMKINEEISVKHLPSTEPDPHVVRIGWSLDSCSTQLGE 297
Query: 1075 KPFSYGYGGTGKNST 1119
+PFSYGYGGTGK ST
Sbjct: 298 EPFSYGYGGTGKKST 312
>ref|XP_866527.1| PREDICTED: similar to E1B-55kDa-associated protein 5 isoform b
isoform 8 [Canis familiaris].
Length = 858
Score = 461 bits (1185), Expect = e-130
Identities = 237/315 (75%), Positives = 241/315 (76%)
Frame = +1
Query: 175 MDVRRLKVNELREELQRRGLDTRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRPGHN 354
MDVRRLKVNELREELQRRGLDTRG GRPGHN
Sbjct: 1 MDVRRLKVNELREELQRRGLDTRGLKAELAERLQAALEAEEPDDERELEADDEPGRPGHN 60
Query: 355 XXXXXXXXXXXXXXXAXXXXXXXXXXXXXXXXXYSGPDGHYVMDNITRQNQFYETPVIKQ 534
A YSGPDGHYVMDNITRQNQFYE+ VIKQ
Sbjct: 61 NEEVETEGGSELEGTAQPPPSGLQPHPEPGG--YSGPDGHYVMDNITRQNQFYESQVIKQ 118
Query: 535 ENESGYERRPLEMEQQQQAYRPEVKTEMKQEAPTSFLPPEASQLKPDRQQFQSRKRPYEE 714
ENESGYERRPLEMEQQQ AYRPEVKTEMKQEAPTSFLPPEASQLKPDRQQFQSRKRPYEE
Sbjct: 119 ENESGYERRPLEMEQQQ-AYRPEVKTEMKQEAPTSFLPPEASQLKPDRQQFQSRKRPYEE 177
Query: 715 NRGRGYFEHREERRGRSPQPPAXXXXXXXXXTLVAIDTYNCDLHFKVARDRSSGYPLTIE 894
NRGRGYFEHRE+RRGRSPQPPA TLVAIDTYNCDLHFKVARDRSSGYPLTIE
Sbjct: 178 NRGRGYFEHREDRRGRSPQPPAEEDEDDFDDTLVAIDTYNCDLHFKVARDRSSGYPLTIE 237
Query: 895 GFAYLWSGARASYGVKRGRVCFEMKINEEISVKHLPSTEPDPHVVRIGWSLDSCSTQLGE 1074
GFAYLWSGARASYGV+RGRVCFEMKINEEISVKHLPSTEPDPHVVRIGWSLDSCSTQLGE
Sbjct: 238 GFAYLWSGARASYGVRRGRVCFEMKINEEISVKHLPSTEPDPHVVRIGWSLDSCSTQLGE 297
Query: 1075 KPFSYGYGGTGKNST 1119
+PFSYGYGGTGK ST
Sbjct: 298 EPFSYGYGGTGKKST 312
>ref|XP_866499.1| PREDICTED: similar to E1B-55kDa-associated protein 5 isoform b
isoform 6 [Canis familiaris].
Length = 572
Score = 461 bits (1185), Expect = e-130
Identities = 237/315 (75%), Positives = 241/315 (76%)
Frame = +1
Query: 175 MDVRRLKVNELREELQRRGLDTRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRPGHN 354
MDVRRLKVNELREELQRRGLDTRG GRPGHN
Sbjct: 1 MDVRRLKVNELREELQRRGLDTRGLKAELAERLQAALEAEEPDDERELEADDEPGRPGHN 60
Query: 355 XXXXXXXXXXXXXXXAXXXXXXXXXXXXXXXXXYSGPDGHYVMDNITRQNQFYETPVIKQ 534
A YSGPDGHYVMDNITRQNQFYE+ VIKQ
Sbjct: 61 NEEVETEGGSELEGTAQPPPSGLQPHPEPGG--YSGPDGHYVMDNITRQNQFYESQVIKQ 118
Query: 535 ENESGYERRPLEMEQQQQAYRPEVKTEMKQEAPTSFLPPEASQLKPDRQQFQSRKRPYEE 714
ENESGYERRPLEMEQQQ AYRPEVKTEMKQEAPTSFLPPEASQLKPDRQQFQSRKRPYEE
Sbjct: 119 ENESGYERRPLEMEQQQ-AYRPEVKTEMKQEAPTSFLPPEASQLKPDRQQFQSRKRPYEE 177
Query: 715 NRGRGYFEHREERRGRSPQPPAXXXXXXXXXTLVAIDTYNCDLHFKVARDRSSGYPLTIE 894
NRGRGYFEHRE+RRGRSPQPPA TLVAIDTYNCDLHFKVARDRSSGYPLTIE
Sbjct: 178 NRGRGYFEHREDRRGRSPQPPAEEDEDDFDDTLVAIDTYNCDLHFKVARDRSSGYPLTIE 237
Query: 895 GFAYLWSGARASYGVKRGRVCFEMKINEEISVKHLPSTEPDPHVVRIGWSLDSCSTQLGE 1074
GFAYLWSGARASYGV+RGRVCFEMKINEEISVKHLPSTEPDPHVVRIGWSLDSCSTQLGE
Sbjct: 238 GFAYLWSGARASYGVRRGRVCFEMKINEEISVKHLPSTEPDPHVVRIGWSLDSCSTQLGE 297
Query: 1075 KPFSYGYGGTGKNST 1119
+PFSYGYGGTGK ST
Sbjct: 298 EPFSYGYGGTGKKST 312
>ref|XP_852865.1| PREDICTED: similar to E1B-55kDa-associated protein 5 isoform b
isoform 2 [Canis familiaris].
Length = 856
Score = 461 bits (1185), Expect = e-130
Identities = 237/315 (75%), Positives = 241/315 (76%)
Frame = +1
Query: 175 MDVRRLKVNELREELQRRGLDTRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRPGHN 354
MDVRRLKVNELREELQRRGLDTRG GRPGHN
Sbjct: 1 MDVRRLKVNELREELQRRGLDTRGLKAELAERLQAALEAEEPDDERELEADDEPGRPGHN 60
Query: 355 XXXXXXXXXXXXXXXAXXXXXXXXXXXXXXXXXYSGPDGHYVMDNITRQNQFYETPVIKQ 534
A YSGPDGHYVMDNITRQNQFYE+ VIKQ
Sbjct: 61 NEEVETEGGSELEGTAQPPPSGLQPHPEPGG--YSGPDGHYVMDNITRQNQFYESQVIKQ 118
Query: 535 ENESGYERRPLEMEQQQQAYRPEVKTEMKQEAPTSFLPPEASQLKPDRQQFQSRKRPYEE 714
ENESGYERRPLEMEQQQ AYRPEVKTEMKQEAPTSFLPPEASQLKPDRQQFQSRKRPYEE
Sbjct: 119 ENESGYERRPLEMEQQQ-AYRPEVKTEMKQEAPTSFLPPEASQLKPDRQQFQSRKRPYEE 177
Query: 715 NRGRGYFEHREERRGRSPQPPAXXXXXXXXXTLVAIDTYNCDLHFKVARDRSSGYPLTIE 894
NRGRGYFEHRE+RRGRSPQPPA TLVAIDTYNCDLHFKVARDRSSGYPLTIE
Sbjct: 178 NRGRGYFEHREDRRGRSPQPPAEEDEDDFDDTLVAIDTYNCDLHFKVARDRSSGYPLTIE 237
Query: 895 GFAYLWSGARASYGVKRGRVCFEMKINEEISVKHLPSTEPDPHVVRIGWSLDSCSTQLGE 1074
GFAYLWSGARASYGV+RGRVCFEMKINEEISVKHLPSTEPDPHVVRIGWSLDSCSTQLGE
Sbjct: 238 GFAYLWSGARASYGVRRGRVCFEMKINEEISVKHLPSTEPDPHVVRIGWSLDSCSTQLGE 297
Query: 1075 KPFSYGYGGTGKNST 1119
+PFSYGYGGTGK ST
Sbjct: 298 EPFSYGYGGTGKKST 312
>ref|XP_866542.1| PREDICTED: similar to E1B-55kDa-associated protein 5 isoform b
isoform 9 [Canis familiaris].
Length = 859
Score = 454 bits (1167), Expect = e-128
Identities = 236/318 (74%), Positives = 241/318 (75%), Gaps = 3/318 (0%)
Frame = +1
Query: 175 MDVRRLKVNELREELQRRGLDTRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRPGHN 354
MDVRRLKVNELREELQRRGLDTRG GRPGHN
Sbjct: 1 MDVRRLKVNELREELQRRGLDTRGLKAELAERLQAALEAEEPDDERELEADDEPGRPGHN 60
Query: 355 XXXXXXXXXXXXXXXAXXXXXXXXXXXXXXXXXYSGPDGHYVMDNITRQNQFYETPVIKQ 534
A YSGPDGHYVMDNITRQNQFYE+ VIKQ
Sbjct: 61 NEEVETEGGSELEGTAQPPPSGLQPHPEPGG--YSGPDGHYVMDNITRQNQFYESQVIKQ 118
Query: 535 ENESGYERRPLEMEQQQQAYRPEVKTEMKQEAPTSFLPPEASQLKPDRQQFQSRKRPYEE 714
ENESGYERRPLEMEQQQ AYRPEVKTEMKQEAPTSFLPPEASQLKPDRQQFQSRKRPYEE
Sbjct: 119 ENESGYERRPLEMEQQQ-AYRPEVKTEMKQEAPTSFLPPEASQLKPDRQQFQSRKRPYEE 177
Query: 715 NRGRGYFEHREER---RGRSPQPPAXXXXXXXXXTLVAIDTYNCDLHFKVARDRSSGYPL 885
NRGRGYFEHRE+R +GRSPQPPA TLVAIDTYNCDLHFKVARDRSSGYPL
Sbjct: 178 NRGRGYFEHREDRSFSQGRSPQPPAEEDEDDFDDTLVAIDTYNCDLHFKVARDRSSGYPL 237
Query: 886 TIEGFAYLWSGARASYGVKRGRVCFEMKINEEISVKHLPSTEPDPHVVRIGWSLDSCSTQ 1065
TIEGFAYLWSGARASYGV+RGRVCFEMKINEEISVKHLPSTEPDPHVVRIGWSLDSCSTQ
Sbjct: 238 TIEGFAYLWSGARASYGVRRGRVCFEMKINEEISVKHLPSTEPDPHVVRIGWSLDSCSTQ 297
Query: 1066 LGEKPFSYGYGGTGKNST 1119
LGE+PFSYGYGGTGK ST
Sbjct: 298 LGEEPFSYGYGGTGKKST 315
>ref|XP_866586.1| PREDICTED: similar to E1B-55kDa-associated protein 5 isoform d
isoform 11 [Canis familiaris].
Length = 756
Score = 405 bits (1042), Expect = e-113
Identities = 197/213 (92%), Positives = 201/213 (94%)
Frame = +1
Query: 481 MDNITRQNQFYETPVIKQENESGYERRPLEMEQQQQAYRPEVKTEMKQEAPTSFLPPEAS 660
MDNITRQNQFYE+ VIKQENESGYERRPLEMEQQQ AYRPEVKTEMKQEAPTSFLPPEAS
Sbjct: 1 MDNITRQNQFYESQVIKQENESGYERRPLEMEQQQ-AYRPEVKTEMKQEAPTSFLPPEAS 59
Query: 661 QLKPDRQQFQSRKRPYEENRGRGYFEHREERRGRSPQPPAXXXXXXXXXTLVAIDTYNCD 840
QLKPDRQQFQSRKRPYEENRGRGYFEHRE+RRGRSPQPPA TLVAIDTYNCD
Sbjct: 60 QLKPDRQQFQSRKRPYEENRGRGYFEHREDRRGRSPQPPAEEDEDDFDDTLVAIDTYNCD 119
Query: 841 LHFKVARDRSSGYPLTIEGFAYLWSGARASYGVKRGRVCFEMKINEEISVKHLPSTEPDP 1020
LHFKVARDRSSGYPLTIEGFAYLWSGARASYGV+RGRVCFEMKINEEISVKHLPSTEPDP
Sbjct: 120 LHFKVARDRSSGYPLTIEGFAYLWSGARASYGVRRGRVCFEMKINEEISVKHLPSTEPDP 179
Query: 1021 HVVRIGWSLDSCSTQLGEKPFSYGYGGTGKNST 1119
HVVRIGWSLDSCSTQLGE+PFSYGYGGTGK ST
Sbjct: 180 HVVRIGWSLDSCSTQLGEEPFSYGYGGTGKKST 212
>ref|XP_533659.2| PREDICTED: similar to E1B-55kDa-associated protein 5 isoform d
isoform 1 [Canis familiaris].
Length = 756
Score = 405 bits (1042), Expect = e-113
Identities = 197/213 (92%), Positives = 201/213 (94%)
Frame = +1
Query: 481 MDNITRQNQFYETPVIKQENESGYERRPLEMEQQQQAYRPEVKTEMKQEAPTSFLPPEAS 660
MDNITRQNQFYE+ VIKQENESGYERRPLEMEQQQ AYRPEVKTEMKQEAPTSFLPPEAS
Sbjct: 1 MDNITRQNQFYESQVIKQENESGYERRPLEMEQQQ-AYRPEVKTEMKQEAPTSFLPPEAS 59
Query: 661 QLKPDRQQFQSRKRPYEENRGRGYFEHREERRGRSPQPPAXXXXXXXXXTLVAIDTYNCD 840
QLKPDRQQFQSRKRPYEENRGRGYFEHRE+RRGRSPQPPA TLVAIDTYNCD
Sbjct: 60 QLKPDRQQFQSRKRPYEENRGRGYFEHREDRRGRSPQPPAEEDEDDFDDTLVAIDTYNCD 119
Query: 841 LHFKVARDRSSGYPLTIEGFAYLWSGARASYGVKRGRVCFEMKINEEISVKHLPSTEPDP 1020
LHFKVARDRSSGYPLTIEGFAYLWSGARASYGV+RGRVCFEMKINEEISVKHLPSTEPDP
Sbjct: 120 LHFKVARDRSSGYPLTIEGFAYLWSGARASYGVRRGRVCFEMKINEEISVKHLPSTEPDP 179
Query: 1021 HVVRIGWSLDSCSTQLGEKPFSYGYGGTGKNST 1119
HVVRIGWSLDSCSTQLGE+PFSYGYGGTGK ST
Sbjct: 180 HVVRIGWSLDSCSTQLGEEPFSYGYGGTGKKST 212
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.315 0.135 0.419
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 37,182,283
Number of extensions: 914105
Number of successful extensions: 3848
Number of sequences better than 1.0e-05: 19
Number of HSP's gapped: 3809
Number of HSP's successfully gapped: 30
Length of query: 373
Length of database: 18,874,504
Length adjustment: 104
Effective length of query: 269
Effective length of database: 15,407,560
Effective search space: 4144633640
Effective search space used: 4144633640
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 35 (18.1 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002454
(1120 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_008971.2| heterogeneous nuclear ribonucleoprotein U-like ... 452 e-127
Alignment gi|NP_653333.1| heterogeneous nuclear ribonucleoprotein U-like ... 402 e-112
Alignment gi|NP_004492.2| heterogeneous nuclear ribonucleoprotein U isofo... 161 1e-39
Alignment gi|NP_114032.2| heterogeneous nuclear ribonucleoprotein U isofo... 159 6e-39
Alignment gi|NP_001073027.1| heterogeneous nuclear ribonucleoprotein U-li... 120 2e-27
>ref|NP_008971.2| heterogeneous nuclear ribonucleoprotein U-like protein 1 isoform a
[Homo sapiens].
Length = 856
Score = 452 bits (1163), Expect = e-127
Identities = 233/315 (73%), Positives = 238/315 (75%)
Frame = +1
Query: 175 MDVRRLKVNELREELQRRGLDTRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRPGHN 354
MDVRRLKVNELREELQRRGLDTRG GRPGH
Sbjct: 1 MDVRRLKVNELREELQRRGLDTRGLKAELAERLQAALEAEEPDDERELDADDEPGRPGHI 60
Query: 355 XXXXXXXXXXXXXXXAXXXXXXXXXXXXXXXXXYSGPDGHYVMDNITRQNQFYETPVIKQ 534
A YSGPDGHY MDNITRQNQFY+T VIKQ
Sbjct: 61 NEEVETEGGSELEGTAQPPPPGLQPHAEPGG--YSGPDGHYAMDNITRQNQFYDTQVIKQ 118
Query: 535 ENESGYERRPLEMEQQQQAYRPEVKTEMKQEAPTSFLPPEASQLKPDRQQFQSRKRPYEE 714
ENESGYERRPLEMEQQQ AYRPE+KTEMKQ APTSFLPPEASQLKPDRQQFQSRKRPYEE
Sbjct: 119 ENESGYERRPLEMEQQQ-AYRPEMKTEMKQGAPTSFLPPEASQLKPDRQQFQSRKRPYEE 177
Query: 715 NRGRGYFEHREERRGRSPQPPAXXXXXXXXXTLVAIDTYNCDLHFKVARDRSSGYPLTIE 894
NRGRGYFEHRE+RRGRSPQPPA TLVAIDTYNCDLHFKVARDRSSGYPLTIE
Sbjct: 178 NRGRGYFEHREDRRGRSPQPPAEEDEDDFDDTLVAIDTYNCDLHFKVARDRSSGYPLTIE 237
Query: 895 GFAYLWSGARASYGVKRGRVCFEMKINEEISVKHLPSTEPDPHVVRIGWSLDSCSTQLGE 1074
GFAYLWSGARASYGV+RGRVCFEMKINEEISVKHLPSTEPDPHVVRIGWSLDSCSTQLGE
Sbjct: 238 GFAYLWSGARASYGVRRGRVCFEMKINEEISVKHLPSTEPDPHVVRIGWSLDSCSTQLGE 297
Query: 1075 KPFSYGYGGTGKNST 1119
+PFSYGYGGTGK ST
Sbjct: 298 EPFSYGYGGTGKKST 312
>ref|NP_653333.1| heterogeneous nuclear ribonucleoprotein U-like protein 1 isoform d
[Homo sapiens].
Length = 756
Score = 402 bits (1033), Expect = e-112
Identities = 195/213 (91%), Positives = 200/213 (93%)
Frame = +1
Query: 481 MDNITRQNQFYETPVIKQENESGYERRPLEMEQQQQAYRPEVKTEMKQEAPTSFLPPEAS 660
MDNITRQNQFY+T VIKQENESGYERRPLEMEQQQ AYRPE+KTEMKQ APTSFLPPEAS
Sbjct: 1 MDNITRQNQFYDTQVIKQENESGYERRPLEMEQQQ-AYRPEMKTEMKQGAPTSFLPPEAS 59
Query: 661 QLKPDRQQFQSRKRPYEENRGRGYFEHREERRGRSPQPPAXXXXXXXXXTLVAIDTYNCD 840
QLKPDRQQFQSRKRPYEENRGRGYFEHRE+RRGRSPQPPA TLVAIDTYNCD
Sbjct: 60 QLKPDRQQFQSRKRPYEENRGRGYFEHREDRRGRSPQPPAEEDEDDFDDTLVAIDTYNCD 119
Query: 841 LHFKVARDRSSGYPLTIEGFAYLWSGARASYGVKRGRVCFEMKINEEISVKHLPSTEPDP 1020
LHFKVARDRSSGYPLTIEGFAYLWSGARASYGV+RGRVCFEMKINEEISVKHLPSTEPDP
Sbjct: 120 LHFKVARDRSSGYPLTIEGFAYLWSGARASYGVRRGRVCFEMKINEEISVKHLPSTEPDP 179
Query: 1021 HVVRIGWSLDSCSTQLGEKPFSYGYGGTGKNST 1119
HVVRIGWSLDSCSTQLGE+PFSYGYGGTGK ST
Sbjct: 180 HVVRIGWSLDSCSTQLGEEPFSYGYGGTGKKST 212
>ref|NP_004492.2| heterogeneous nuclear ribonucleoprotein U isoform b [Homo sapiens].
Length = 806
Score = 161 bits (407), Expect = 1e-39
Identities = 92/201 (45%), Positives = 116/201 (57%), Gaps = 19/201 (9%)
Frame = +1
Query: 562 PLEMEQQQQAYRPEVKTEM-KQEAPTSFL-----PPEASQLKPD-------RQQFQSRKR 702
P +QQ Q R K K PTS PP A Q + Q+ +KR
Sbjct: 166 PATQQQQPQQQRGAAKEAAGKSSGPTSLFAVTVAPPGARQGQQQAGGDGKTEQKGGDKKR 225
Query: 703 PYE---ENRGRGYFEHREER---RGRSPQPPAXXXXXXXXXTLVAIDTYNCDLHFKVARD 864
+ E+ GRGYFE+ EE R +SPQPP T+V +DTYNCDLHFK++RD
Sbjct: 226 GVKRPREDHGRGYFEYIEENKYSRAKSPQPPVEEEDEHFDDTVVCLDTYNCDLHFKISRD 285
Query: 865 RSSGYPLTIEGFAYLWSGARASYGVKRGRVCFEMKINEEISVKHLPSTEPDPHVVRIGWS 1044
R S LT+E FA+LW+G RASYGV +G+VCFEMK+ E+I V+HL + + D H VRIGWS
Sbjct: 286 RLSASSLTMESFAFLWAGGRASYGVSKGKVCFEMKVTEKIPVRHLYTKDIDIHEVRIGWS 345
Query: 1045 LDSCSTQLGEKPFSYGYGGTG 1107
L + LGE+ FSYGY G
Sbjct: 346 LTTSGMLLGEEEFSYGYSLKG 366
>ref|NP_114032.2| heterogeneous nuclear ribonucleoprotein U isoform a [Homo sapiens].
Length = 825
Score = 159 bits (401), Expect = 6e-39
Identities = 78/140 (55%), Positives = 98/140 (70%), Gaps = 3/140 (2%)
Frame = +1
Query: 697 KRPYEENRGRGYFEHREER---RGRSPQPPAXXXXXXXXXTLVAIDTYNCDLHFKVARDR 867
KRP E++ GRGYFE+ EE R +SPQPP T+V +DTYNCDLHFK++RDR
Sbjct: 247 KRPREDH-GRGYFEYIEENKYSRAKSPQPPVEEEDEHFDDTVVCLDTYNCDLHFKISRDR 305
Query: 868 SSGYPLTIEGFAYLWSGARASYGVKRGRVCFEMKINEEISVKHLPSTEPDPHVVRIGWSL 1047
S LT+E FA+LW+G RASYGV +G+VCFEMK+ E+I V+HL + + D H VRIGWSL
Sbjct: 306 LSASSLTMESFAFLWAGGRASYGVSKGKVCFEMKVTEKIPVRHLYTKDIDIHEVRIGWSL 365
Query: 1048 DSCSTQLGEKPFSYGYGGTG 1107
+ LGE+ FSYGY G
Sbjct: 366 TTSGMLLGEEEFSYGYSLKG 385
>ref|NP_001073027.1| heterogeneous nuclear ribonucleoprotein U-like protein 2 [Homo
sapiens].
Length = 747
Score = 120 bits (302), Expect = 2e-27
Identities = 65/142 (45%), Positives = 87/142 (61%), Gaps = 4/142 (2%)
Frame = +1
Query: 694 RKRPYEENRGRGYFEHREER---RGRSPQPPAXXXXXXXXX-TLVAIDTYNCDLHFKVAR 861
R+R ++ GR Y+E REE R +SP PP TLV +DTY DLHF+V++
Sbjct: 202 RQRDEKDEHGRAYYEFREEAYHSRSKSPLPPEEEAKDEEEDQTLVNLDTYTSDLHFQVSK 261
Query: 862 DRSSGYPLTIEGFAYLWSGARASYGVKRGRVCFEMKINEEISVKHLPSTEPDPHVVRIGW 1041
DR G PL E F LWSGAR++YGV +G+VCFE K+ + + +K TE ++R+GW
Sbjct: 262 DRYGGQPLFSEKFPTLWSGARSTYGVTKGKVCFEAKVTQNLPMKE-GCTEVS--LLRVGW 318
Query: 1042 SLDSCSTQLGEKPFSYGYGGTG 1107
S+D QLGE FSYG+ G G
Sbjct: 319 SVDFSRPQLGEDEFSYGFDGRG 340
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.315 0.135 0.419
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 36,389,827
Number of extensions: 896860
Number of successful extensions: 3521
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 3489
Number of HSP's successfully gapped: 6
Length of query: 373
Length of database: 18,297,164
Length adjustment: 104
Effective length of query: 269
Effective length of database: 14,868,908
Effective search space: 3999736252
Effective search space used: 3999736252
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 35 (18.1 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002454
(1120 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_835190.1| heterogeneous nuclear ribonucleoprotein U-like ... 447 e-126
Alignment gi|NP_659171.1| heterogeneous nuclear ribonucleoprotein U-like ... 447 e-126
Alignment gi|NP_058085.2| heterogeneous nuclear ribonucleoprotein U [Mus ... 159 5e-39
Alignment gi|NP_001074665.1| heterogeneous nuclear ribonucleoprotein U-li... 121 9e-28
>ref|NP_835190.1| heterogeneous nuclear ribonucleoprotein U-like protein 1 isoform 2
[Mus musculus].
Length = 340
Score = 447 bits (1150), Expect = e-126
Identities = 227/315 (72%), Positives = 235/315 (74%)
Frame = +1
Query: 175 MDVRRLKVNELREELQRRGLDTRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRPGHN 354
MDVRRLKVNELREELQRRGLDTRG G PGHN
Sbjct: 1 MDVRRLKVNELREELQRRGLDTRGLKAELAERLLAALEAEEPEDERELEADDDPGLPGHN 60
Query: 355 XXXXXXXXXXXXXXXAXXXXXXXXXXXXXXXXXYSGPDGHYVMDNITRQNQFYETPVIKQ 534
A YSGPDGHYVMDNITRQNQFYETPVIKQ
Sbjct: 61 NEEVETEGGSELEGTAQPPPPGLQPHPEPGG--YSGPDGHYVMDNITRQNQFYETPVIKQ 118
Query: 535 ENESGYERRPLEMEQQQQAYRPEVKTEMKQEAPTSFLPPEASQLKPDRQQFQSRKRPYEE 714
ENES Y+RRPL+ME QQQ Y PE+KTEMKQEAP SFLPPEASQLK DR QFQ+RKRP+EE
Sbjct: 119 ENESSYDRRPLDMEPQQQVYHPELKTEMKQEAPPSFLPPEASQLKTDRPQFQNRKRPFEE 178
Query: 715 NRGRGYFEHREERRGRSPQPPAXXXXXXXXXTLVAIDTYNCDLHFKVARDRSSGYPLTIE 894
NRGRGYFEHRE+RRGRSPQPPA TLVAIDTYNCDLHFKVARDRSSGYPLTIE
Sbjct: 179 NRGRGYFEHREDRRGRSPQPPAEEDEDDFDDTLVAIDTYNCDLHFKVARDRSSGYPLTIE 238
Query: 895 GFAYLWSGARASYGVKRGRVCFEMKINEEISVKHLPSTEPDPHVVRIGWSLDSCSTQLGE 1074
GFAYLWSGARASYGV+RGRVCFEMKINEEISVKHLPSTEPDPHVVRIGWSLDSCSTQLGE
Sbjct: 239 GFAYLWSGARASYGVRRGRVCFEMKINEEISVKHLPSTEPDPHVVRIGWSLDSCSTQLGE 298
Query: 1075 KPFSYGYGGTGKNST 1119
+PFSYGYGGTGK ST
Sbjct: 299 EPFSYGYGGTGKKST 313
>ref|NP_659171.1| heterogeneous nuclear ribonucleoprotein U-like protein 1 isoform 1
[Mus musculus].
Length = 859
Score = 447 bits (1150), Expect = e-126
Identities = 227/315 (72%), Positives = 235/315 (74%)
Frame = +1
Query: 175 MDVRRLKVNELREELQRRGLDTRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRPGHN 354
MDVRRLKVNELREELQRRGLDTRG G PGHN
Sbjct: 1 MDVRRLKVNELREELQRRGLDTRGLKAELAERLLAALEAEEPEDERELEADDDPGLPGHN 60
Query: 355 XXXXXXXXXXXXXXXAXXXXXXXXXXXXXXXXXYSGPDGHYVMDNITRQNQFYETPVIKQ 534
A YSGPDGHYVMDNITRQNQFYETPVIKQ
Sbjct: 61 NEEVETEGGSELEGTAQPPPPGLQPHPEPGG--YSGPDGHYVMDNITRQNQFYETPVIKQ 118
Query: 535 ENESGYERRPLEMEQQQQAYRPEVKTEMKQEAPTSFLPPEASQLKPDRQQFQSRKRPYEE 714
ENES Y+RRPL+ME QQQ Y PE+KTEMKQEAP SFLPPEASQLK DR QFQ+RKRP+EE
Sbjct: 119 ENESSYDRRPLDMEPQQQVYHPELKTEMKQEAPPSFLPPEASQLKTDRPQFQNRKRPFEE 178
Query: 715 NRGRGYFEHREERRGRSPQPPAXXXXXXXXXTLVAIDTYNCDLHFKVARDRSSGYPLTIE 894
NRGRGYFEHRE+RRGRSPQPPA TLVAIDTYNCDLHFKVARDRSSGYPLTIE
Sbjct: 179 NRGRGYFEHREDRRGRSPQPPAEEDEDDFDDTLVAIDTYNCDLHFKVARDRSSGYPLTIE 238
Query: 895 GFAYLWSGARASYGVKRGRVCFEMKINEEISVKHLPSTEPDPHVVRIGWSLDSCSTQLGE 1074
GFAYLWSGARASYGV+RGRVCFEMKINEEISVKHLPSTEPDPHVVRIGWSLDSCSTQLGE
Sbjct: 239 GFAYLWSGARASYGVRRGRVCFEMKINEEISVKHLPSTEPDPHVVRIGWSLDSCSTQLGE 298
Query: 1075 KPFSYGYGGTGKNST 1119
+PFSYGYGGTGK ST
Sbjct: 299 EPFSYGYGGTGKKST 313
>ref|NP_058085.2| heterogeneous nuclear ribonucleoprotein U [Mus musculus].
Length = 800
Score = 159 bits (401), Expect = 5e-39
Identities = 78/140 (55%), Positives = 98/140 (70%), Gaps = 3/140 (2%)
Frame = +1
Query: 697 KRPYEENRGRGYFEHREER---RGRSPQPPAXXXXXXXXXTLVAIDTYNCDLHFKVARDR 867
KRP E++ GRGYFE+ EE R +SPQPP T+V +DTYNCDLHFK++RDR
Sbjct: 223 KRPREDH-GRGYFEYIEENKYSRAKSPQPPVEEEDEHFDDTVVCLDTYNCDLHFKISRDR 281
Query: 868 SSGYPLTIEGFAYLWSGARASYGVKRGRVCFEMKINEEISVKHLPSTEPDPHVVRIGWSL 1047
S LT+E FA+LW+G RASYGV +G+VCFEMK+ E+I V+HL + + D H VRIGWSL
Sbjct: 282 LSASSLTMESFAFLWAGGRASYGVSKGKVCFEMKVTEKIPVRHLYTKDIDIHEVRIGWSL 341
Query: 1048 DSCSTQLGEKPFSYGYGGTG 1107
+ LGE+ FSYGY G
Sbjct: 342 TTSGMLLGEEEFSYGYSLKG 361
>ref|NP_001074665.1| heterogeneous nuclear ribonucleoprotein U-like protein 2 [Mus
musculus].
Length = 745
Score = 121 bits (304), Expect = 9e-28
Identities = 64/142 (45%), Positives = 88/142 (61%), Gaps = 4/142 (2%)
Frame = +1
Query: 694 RKRPYEENRGRGYFEHREER---RGRSPQPPAXXXXXXXXX-TLVAIDTYNCDLHFKVAR 861
R+R ++ GR Y+E REE R +SP PP TLV +DTY DLHF++++
Sbjct: 200 RQRDEKDEHGRAYYEFREEAYHSRSKSPPPPEEEAKDEEEDQTLVNLDTYTSDLHFQISK 259
Query: 862 DRSSGYPLTIEGFAYLWSGARASYGVKRGRVCFEMKINEEISVKHLPSTEPDPHVVRIGW 1041
DR G PL E F LWSGAR++YGV +G+VCFE K+ + + +K TE ++R+GW
Sbjct: 260 DRYGGQPLFSEKFPTLWSGARSTYGVTKGKVCFEAKVTQNLPMKE-GCTEVS--LLRVGW 316
Query: 1042 SLDSCSTQLGEKPFSYGYGGTG 1107
S+D +QLGE FSYG+ G G
Sbjct: 317 SVDFSCSQLGEDEFSYGFDGRG 338
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.315 0.135 0.419
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 30,748,617
Number of extensions: 751292
Number of successful extensions: 2868
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 2848
Number of HSP's successfully gapped: 6
Length of query: 373
Length of database: 15,617,559
Length adjustment: 103
Effective length of query: 270
Effective length of database: 12,523,851
Effective search space: 3381439770
Effective search space used: 3381439770
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 35 (18.1 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002454
(1120 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_003130615.2| PREDICTED: heterogeneous nuclear ribonucleop... 159 3e-39
Alignment gi|XP_003353867.1| PREDICTED: heterogeneous nuclear ribonucleop... 121 8e-28
>ref|XP_003130615.2| PREDICTED: heterogeneous nuclear ribonucleoprotein U [Sus scrofa].
Length = 963
Score = 159 bits (401), Expect = 3e-39
Identities = 78/140 (55%), Positives = 98/140 (70%), Gaps = 3/140 (2%)
Frame = +1
Query: 697 KRPYEENRGRGYFEHREER---RGRSPQPPAXXXXXXXXXTLVAIDTYNCDLHFKVARDR 867
KRP E++ GRGYFE+ EE R +SPQPP T+V +DTYNCDLHFK++RDR
Sbjct: 247 KRPREDH-GRGYFEYIEENKYSRAKSPQPPVEEEDEHFDDTVVCLDTYNCDLHFKISRDR 305
Query: 868 SSGYPLTIEGFAYLWSGARASYGVKRGRVCFEMKINEEISVKHLPSTEPDPHVVRIGWSL 1047
S LT+E FA+LW+G RASYGV +G+VCFEMK+ E+I V+HL + + D H VRIGWSL
Sbjct: 306 LSASSLTMESFAFLWAGGRASYGVSKGKVCFEMKVTEKIPVRHLYTKDIDIHEVRIGWSL 365
Query: 1048 DSCSTQLGEKPFSYGYGGTG 1107
+ LGE+ FSYGY G
Sbjct: 366 TTSGMLLGEEEFSYGYSLKG 385
>ref|XP_003353867.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like protein 2
[Sus scrofa].
Length = 747
Score = 121 bits (303), Expect = 8e-28
Identities = 65/142 (45%), Positives = 87/142 (61%), Gaps = 4/142 (2%)
Frame = +1
Query: 694 RKRPYEENRGRGYFEHREER---RGRSPQPPAXXXXXXXXX-TLVAIDTYNCDLHFKVAR 861
R+R ++ GR Y+E REE R +SP PP TLV +DTY DLHF+V++
Sbjct: 203 RQRDEKDEHGRAYYEFREEAYHSRSKSPPPPEEEAKDEEEDQTLVNLDTYTSDLHFQVSK 262
Query: 862 DRSSGYPLTIEGFAYLWSGARASYGVKRGRVCFEMKINEEISVKHLPSTEPDPHVVRIGW 1041
DR G PL E F LWSGAR++YGV +G+VCFE K+ + + +K TE ++R+GW
Sbjct: 263 DRYGGQPLFSEKFPTLWSGARSTYGVTKGKVCFEAKVTQNLPMKE-GCTEVS--LLRVGW 319
Query: 1042 SLDSCSTQLGEKPFSYGYGGTG 1107
S+D QLGE FSYG+ G G
Sbjct: 320 SVDFSHPQLGEDEFSYGFDGRG 341
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.315 0.135 0.419
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 23,428,226
Number of extensions: 642938
Number of successful extensions: 2145
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 2134
Number of HSP's successfully gapped: 2
Length of query: 373
Length of database: 11,343,932
Length adjustment: 100
Effective length of query: 273
Effective length of database: 8,854,232
Effective search space: 2417205336
Effective search space used: 2417205336
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 34 (17.7 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002454
(1120 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr06 589 e-165
>Sscrofa_Chr06
|| Length = 157765593
Score = 589 bits (297), Expect = e-165
Identities = 300/301 (99%)
Strand = Plus / Plus
Query: 175 atggatgtgcgccgtctgaaggtgaacgaacttcgcgaggaactgcagcgccgcggcctg 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45075622 atggatgtgcgccgtctgaaggtgaacgaacttcgcgaggaactgcagcgccgcggcctg 45075681
Query: 235 gacactcgtggcctcaaggccgagcttgctgagcggctgcaggcggcgctggaggccgag 294
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45075682 gacactcttggcctcaaggccgagcttgctgagcggctgcaggcggcgctggaggccgag 45075741
Query: 295 gagcccgacgacgagcgggagctcgaggccgacgacgaaccggggcgacctgggcacaac 354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45075742 gagcccgacgacgagcgggagctcgaggccgacgacgaaccggggcgacctgggcacaac 45075801
Query: 355 agcgaggaggtcgagaccgaggggggctccgagctggaggggaccgcgcagccaccgccg 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45075802 agcgaggaggtcgagaccgaggggggctccgagctggaggggaccgcgcagccaccgccg 45075861
Query: 415 cccgggctgcagctgcagccgcacccggagcccggcggctactcggggccggacggacat 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45075862 cccgggctgcagctgcagccgcacccggagcccggcggctactcggggccggacggacat 45075921
Query: 475 t 475
|
Sbjct: 45075922 t 45075922
Score = 311 bits (157), Expect = 4e-82
Identities = 157/157 (100%)
Strand = Plus / Plus
Query: 600 agaagtgaagacagagatgaagcaagaagcacccaccagtttcctcccacctgaagcatc 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45082151 agaagtgaagacagagatgaagcaagaagcacccaccagtttcctcccacctgaagcatc 45082210
Query: 660 tcaactcaaaccagacagacagcagttccagagtcgcaagaggccttatgaagaaaaccg 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45082211 tcaactcaaaccagacagacagcagttccagagtcgcaagaggccttatgaagaaaaccg 45082270
Query: 720 gggaagggggtacttcgagcaccgagaggagaggagg 756
|||||||||||||||||||||||||||||||||||||
Sbjct: 45082271 gggaagggggtacttcgagcaccgagaggagaggagg 45082307
Score = 262 bits (132), Expect = 4e-67
Identities = 138/140 (98%)
Strand = Plus / Plus
Query: 830 ataactgcgaccttcacttcaaggtggcccgagacaggagtagtggctaccctctcacaa 889
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45086703 ataactgcgaccttcacttcaaggtggcccgagacaggagtagtggctaccctctcacaa 45086762
Query: 890 ttgaaggttttgcatacctatggtcaggagcccgtgccagctacggggtcaaaaggggcc 949
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 45086763 ttgaaggttttgcatacctatggtcaggagcccgtgccagctacggggtcagaaggggcc 45086822
Query: 950 gtgtgtgctttgaaatgaag 969
||||||||||||| ||||||
Sbjct: 45086823 gtgtgtgctttgagatgaag 45086842
Score = 250 bits (126), Expect = 1e-63
Identities = 126/126 (100%)
Strand = Plus / Plus
Query: 476 atgtcatggacaatattaccaggcagaaccaattctatgagacaccggtcatcaaacaag 535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45079594 atgtcatggacaatattaccaggcagaaccaattctatgagacaccggtcatcaaacaag 45079653
Query: 536 aaaacgagtcaggctacgagaggagaccattggaaatggagcaacagcagcaggcctatc 595
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45079654 aaaacgagtcaggctacgagaggagaccattggaaatggagcaacagcagcaggcctatc 45079713
Query: 596 gcccag 601
||||||
Sbjct: 45079714 gcccag 45079719
Score = 204 bits (103), Expect = 8e-50
Identities = 103/103 (100%)
Strand = Plus / Plus
Query: 968 agatcaatgaggaaatctctgtcaagcaccttccgtctacagagcctgacccccatgttg 1027
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45088952 agatcaatgaggaaatctctgtcaagcaccttccgtctacagagcctgacccccatgttg 45089011
Query: 1028 tccgtattggttggtccctggactcctgcagcactcagctagg 1070
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45089012 tccgtattggttggtccctggactcctgcagcactcagctagg 45089054
Score = 151 bits (76), Expect = 1e-33
Identities = 76/76 (100%)
Strand = Plus / Plus
Query: 754 aggggccgatctcctcagcctcccgctgaagaggatgaagatgactttgacgacactctt 813
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45084643 aggggccgatctcctcagcctcccgctgaagaggatgaagatgactttgacgacactctt 45084702
Query: 814 gttgccatcgacacat 829
||||||||||||||||
Sbjct: 45084703 gttgccatcgacacat 45084718
Score = 113 bits (57), Expect = 2e-22
Identities = 79/89 (88%)
Strand = Plus / Plus
Query: 43 ttttgagccgccgccgccattggagtgggggnnnnnnnntttcccccttcgcctcctgac 102
|||||||||||||||||| |||||||||||| |||||||||||||||||||||
Sbjct: 45075493 ttttgagccgccgccgcctttggagtgggggcccccccctttcccccttcgcctcctgac 45075552
Query: 103 aggaaaggtttaagggggacagagccctg 131
|||||||| ||||||||||||||||||||
Sbjct: 45075553 aggaaagggttaagggggacagagccctg 45075581
Score = 89.7 bits (45), Expect = 3e-15
Identities = 51/53 (96%)
Strand = Plus / Plus
Query: 1068 aggcgaaaagcctttctcctatggctatggaggcactgggaagaattccacca 1120
||||||| ||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 45091097 aggcgaagagcctttctcctatggctatggaggcactgggaagaagtccacca 45091149
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 24,802,984
Number of extensions: 160
Number of successful extensions: 160
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 160
Number of HSP's successfully gapped: 8
Length of query: 1120
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 1099
Effective length of database: 2,808,413,156
Effective search space: 3086446058444
Effective search space used: 3086446058444
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)